BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780743|ref|YP_003065156.1| putative uracil-DNA glycosylase [Candidatus Liberibacter asiaticus str. psy62] (261 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|209886081|ref|YP_002289938.1| uracil-DNA glycosylase, family 4 [Oligotropha carboxidovorans OM5] gi|209874277|gb|ACI94073.1| uracil-DNA glycosylase, family 4 [Oligotropha carboxidovorans OM5] Length = 275 Score = 245 bits (624), Expect = 7e-63, Method: Composition-based stats. Identities = 80/270 (29%), Positives = 130/270 (48%), Gaps = 13/270 (4%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEK--------SIDSAIQ 51 M S+R +Q ++L FY ++GV +EP N + Sbjct: 4 MMSERPPTQHELLA---FYLEAGVDCALAEEPVNRLSETEAEPAPMRATPVRERPAPLPV 60 Query: 52 PITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLM 111 P T++ ++ A +A +A +L EL+ LL F C L T+ + +M Sbjct: 61 PRTDVAPAPDVAIESARELAPQAKTLDELRGLLEVFDGCALKMTATRLVFGDGNPQARVM 120 Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEM 171 +G P +++ G PF G++G +LD ML SI + RT +I+ + PW PPGNR S E Sbjct: 121 FVGEAPGRDEDLQGIPFIGRSGKLLDLMLASIGLDRTSAYIANVIPWRPPGNREPSPHET 180 Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231 ++C P I RQIEL+ P +L+ +G + ++ G+W + T +I +AT Sbjct: 181 QMCLPFIRRQIELVDPDVLVCLGKPSSQAVLELKDGIV-KSRGRWFDYNTGTRMIRAMAT 239 Query: 232 VHPQELIQYPLIKKNTWHALITLKKALKNL 261 HP L++ P+ K+ TW L +++AL L Sbjct: 240 FHPAYLLRQPIYKRMTWKDLRMIRRALAAL 269 >gi|115526415|ref|YP_783326.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas palustris BisA53] gi|115520362|gb|ABJ08346.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas palustris BisA53] Length = 273 Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats. Identities = 85/274 (31%), Positives = 131/274 (47%), Gaps = 17/274 (6%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYES-----QRKEKSIDSAIQPIT 54 M L+ ++L FY ++GV DEP N T ES R A P+ Sbjct: 1 MMPDHNLTVRELLA---FYLEAGVDCALADEPVNRLTDESDSALVARPVARALPAAMPLA 57 Query: 55 NIRHIHSP-------LVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEG 107 + P + A A+ A +L L+ LL F C L ST+ + A Sbjct: 58 PMLAPAQPLAPAPDQAISSAREAARSAPTLEALRDLLERFDGCALKSTATRLVFADGNPQ 117 Query: 108 QDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLS 167 +M++G P ++I G PF G++G +LD ML +I + R+Q++I+ + PW PPGNR + Sbjct: 118 ARIMLVGEAPGRDEDIEGLPFVGRSGKLLDLMLAAIGLDRSQVYIANVIPWRPPGNRTPT 177 Query: 168 NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227 E +IC P I RQIEL+ P +L+ +GN + + + G+W + T I Sbjct: 178 PQETQICLPFIKRQIELVDPDVLVTLGNPSTQAILSTREGIM-RTRGRWIDYDTGRRSIR 236 Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 L T HP L++ P K+ +W L + AL++L Sbjct: 237 ALPTFHPAYLLRQPSYKRMSWQDLRAIATALESL 270 >gi|299134677|ref|ZP_07027869.1| phage SPO1 DNA polymerase-related protein [Afipia sp. 1NLS2] gi|298590487|gb|EFI50690.1| phage SPO1 DNA polymerase-related protein [Afipia sp. 1NLS2] Length = 271 Score = 241 bits (614), Expect = 9e-62, Method: Composition-based stats. Identities = 79/271 (29%), Positives = 132/271 (48%), Gaps = 15/271 (5%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDS----------A 49 M S+R + ++L FY ++GV +EP + + + Sbjct: 1 MISERPPTPHELLA---FYLEAGVDCALAEEPFDRLSEIEAEPAPAPRRIAPLTPAPALT 57 Query: 50 IQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD 109 P T++ ++ A +A KA +L EL+ LL +F C L +T+ + Sbjct: 58 AAPQTDLAPAPDAAIESARELAPKAKTLEELRGLLEAFDGCALKATATKLVFGDGNPQAR 117 Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI 169 +M +G P +++ G PF G++G +LD ML SI + RT+ +I+ + PW PPGNR+ S Sbjct: 118 VMFVGEAPGRDEDLQGIPFIGRSGKLLDLMLASIGLDRTKAYIANVIPWRPPGNRDPSPH 177 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E ++C P I RQIEL+ P I++ +G + + + G+W + T I + Sbjct: 178 ETQMCLPFIKRQIELVDPDIVVCLGKPSSQAVLDLKDGIM-RTRGRWFDYNTGTRTIRAM 236 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 AT HP L++ P+ K+ TW L T++ AL Sbjct: 237 ATFHPAYLLRQPIYKRMTWKDLRTIQTALAA 267 >gi|27377634|ref|NP_769163.1| hypothetical protein bll2523 [Bradyrhizobium japonicum USDA 110] gi|27350779|dbj|BAC47788.1| bll2523 [Bradyrhizobium japonicum USDA 110] Length = 271 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 16/270 (5%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATY----------ESQRKEKSIDSA 49 M + + ++L FY ++GV +EP + + + +A Sbjct: 1 MIPEPAPTVRELLA---FYLEAGVDCALTEEPIDRLAEIAAPPPVPRAAAPVEAPRPVAA 57 Query: 50 IQPITNIRHIHSP-LVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQ 108 I + A A+ A +L L+ L++ F C L T+ + A Sbjct: 58 PAVIRGEAAPAPDVAIASAREAARTAPTLEALRELMQGFEGCALKHTATRLVFADGNPQA 117 Query: 109 DLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSN 168 +M +G P ++I G PF G++G +LD M+ +I + RT +I+ + PW PPGNR + Sbjct: 118 RIMFVGEAPGRDEDIEGLPFVGRSGKLLDLMIGAIGLNRTTAYIANVIPWRPPGNRTPTP 177 Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT 228 E ++C P I RQIEL++P +L+ +GN + + G+W + T I Sbjct: 178 QETQVCLPFIQRQIELVNPDVLVTLGNPSTQTLLGTREGIM-RTRGRWFDYETAGRTIRA 236 Query: 229 LATVHPQELIQYPLIKKNTWHALITLKKAL 258 L T HP L++ P K+ W L + K L Sbjct: 237 LPTFHPAYLLRSPSYKRLAWQDLRAIAKVL 266 >gi|217976632|ref|YP_002360779.1| phage SPO1 DNA polymerase-related protein [Methylocella silvestris BL2] gi|217502008|gb|ACK49417.1| phage SPO1 DNA polymerase-related protein [Methylocella silvestris BL2] Length = 281 Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 74/264 (28%), Positives = 121/264 (45%), Gaps = 13/264 (4%) Query: 10 EQILTIALFYADSGVYWVFDE-PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQAD 68 E ++ + +YA+ GV DE P++ +Q + AI + +P A Sbjct: 3 ESLIALLRWYAEMGVDIALDEIPHDRTRAPAQPPPERPAIAINAPPQAPAMSAPRQPVAI 62 Query: 69 SIAQK-----------ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117 + A A +L +L++ L +F C L +T+ + G +M +G P Sbjct: 63 AGADSLERDAREAAAAAKTLEKLRAELLAFEGCGLKTTATQLVFGDGEAGAKVMFVGEAP 122 Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177 ++ G PF G+ G +L++ML +I + R ++I+ + PW PPGNR + IE C P Sbjct: 123 GADEDRQGVPFVGRAGQLLNRMLAAIGLDRRDVYIANVVPWRPPGNRTPTPIETAACLPF 182 Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237 RQIEL+ PKIL+ +G + + G+W + I LA HP L Sbjct: 183 TRRQIELVGPKILVCLGLPSAQTLLGAK-DSMTRIRGRWLTYDCGGTPIRALAMFHPAYL 241 Query: 238 IQYPLIKKNTWHALITLKKALKNL 261 ++ P KK W L L +AL ++ Sbjct: 242 LRQPGQKKLAWQDLRMLARALADM 265 >gi|85714248|ref|ZP_01045236.1| phage SPO1 DNA polymerase-related protein [Nitrobacter sp. Nb-311A] gi|85698695|gb|EAQ36564.1| phage SPO1 DNA polymerase-related protein [Nitrobacter sp. Nb-311A] Length = 281 Score = 238 bits (606), Expect = 8e-61, Method: Composition-based stats. Identities = 78/280 (27%), Positives = 133/280 (47%), Gaps = 24/280 (8%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYE-------------------SQ 40 MTS + + ++L FY ++GV DEP + + + Sbjct: 1 MTSDQATTVRELLA---FYLEAGVDCALGDEPIDRLSTPDLARSDRPVATAAGIVPVAAV 57 Query: 41 RKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI 100 R+ + P + ++ A A+ A SL L++LL SF C L T+ + Sbjct: 58 RQPPRQTATAAPRAGVAPPPDIAIESAREAARTAPSLEALRTLLESFDGCALKFTASRLV 117 Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160 A LM +G P ++I+G PF G++G +L++M+ +I + R+ ++I+ + PW P Sbjct: 118 FADGNPQARLMFVGEAPGRDEDIAGLPFVGRSGQLLNRMIAAIGLKRSDVYIANVIPWRP 177 Query: 161 PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220 PGNR + E +IC P I RQIEL++P +L+ +GN + + + GKW + Sbjct: 178 PGNRTPTPQETQICLPFIRRQIELVNPDVLVTLGNPSTQTLLQ-TREGIKRIRGKWFDYD 236 Query: 221 TPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 I +AT HP L++ P K+ W L + +AL++ Sbjct: 237 VGTRTIRAMATFHPAYLLRSPFDKRMAWLDLRAIARALED 276 >gi|319898574|ref|YP_004158667.1| phage SPO1 DNA polymerase-related protein [Bartonella clarridgeiae 73] gi|319402538|emb|CBI76081.1| phage SPO1 DNA polymerase-related protein [Bartonella clarridgeiae 73] Length = 283 Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 91/275 (33%), Positives = 130/275 (47%), Gaps = 16/275 (5%) Query: 2 TSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPI------- 53 SK+I + FY +SGV D P + + E ++ A P Sbjct: 10 MSKKIKDLILSEDLLNFYKESGVDTALTDVPIDRFNQPTTPLEPQLNQAYNPPHHKQISP 69 Query: 54 -------TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTE 106 ++ A IA+ A +L ELKS L SF+DC L T+ +T + T Sbjct: 70 TIKPYALPPYNPNNTQPALSAIEIAKNAQTLDELKSALLSFNDCSLKLTAKNTCFSDGTA 129 Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL 166 G LM+IG P ++I G PF GK G +L+K+L SI + R ++I+ PW PPGNR Sbjct: 130 GSPLMLIGEAPGREEDIQGIPFVGKAGILLNKILASIGLTRQNVYIANTIPWRPPGNRTP 189 Query: 167 SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII 226 + E+ +CRP I RQI L P+IL+ +G FF + + GKW + I Sbjct: 190 TPREVALCRPFIERQIFLAKPRILIALGGTATQFFTGVQSSII-RIRGKWLTYENENLKI 248 Query: 227 PTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 P + T HP L++ P KK TW + +K L NL Sbjct: 249 PVMPTFHPAYLLRTPSQKKLTWIDFLEVKNRLNNL 283 >gi|319403899|emb|CBI77485.1| phage SPO1 DNA polymerase-related protein [Bartonella rochalimae ATCC BAA-1498] Length = 273 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 87/274 (31%), Positives = 127/274 (46%), Gaps = 15/274 (5%) Query: 2 TSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEK-------------SID 47 S++ + FY +SGV D P + + + + S Sbjct: 1 MSEKNKDVISNEDLLSFYKESGVDAALTDVPIDHFNQAASLEPQLNQAHDIPYYKKISPT 60 Query: 48 SAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEG 107 + + V A IA+ A +L ELKS L SF+ C L T+ +T + T G Sbjct: 61 IKSHTLAPDNPDKTQPVLSAVEIAKSAQTLDELKSALLSFNGCSLKLTAKNTCFSDGTAG 120 Query: 108 QDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLS 167 LM+IG P ++I G PF GK G +L+K+L SI + R ++I+ PW PPGNR + Sbjct: 121 SPLMLIGEAPGREEDIQGIPFVGKAGILLNKILASIGLSRQNVYIANTIPWRPPGNRTPT 180 Query: 168 NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227 E+ +CRP I RQI L P+IL+ +G+ FF + + GKW IP Sbjct: 181 PREVTLCRPFIERQILLAKPRILIALGSTAAQFFTGIQS-GIIRIRGKWLTYENEDLQIP 239 Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + T HP L++ P KK TW + +K L NL Sbjct: 240 VMPTFHPAYLLRTPSQKKLTWMDFLEVKNRLNNL 273 >gi|319406910|emb|CBI80545.1| phage SPO1 DNA polymerase-related protein [Bartonella sp. 1-1C] Length = 273 Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats. Identities = 86/274 (31%), Positives = 127/274 (46%), Gaps = 15/274 (5%) Query: 2 TSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEK-------------SID 47 S++ + FY +SGV D P + + + + S Sbjct: 1 MSEKNKDVISNEDLLSFYKESGVDAALTDVPIDHFNQAASLEPQLNQAHDIPYHKQISPT 60 Query: 48 SAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEG 107 + + + A IA+ A +L ELKS L SF+ C L T+ +T + T G Sbjct: 61 IKSHTLAPDNPDKTQPLLSAVEIAKSAQTLDELKSALLSFNGCSLKLTAKNTCFSDGTAG 120 Query: 108 QDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLS 167 LM+IG P ++I G PF GK G +L+K+L SI + R ++I+ PW PPGNR + Sbjct: 121 SPLMLIGEAPGREEDIQGIPFVGKAGILLNKILASIGLSRQNVYIANTIPWRPPGNRTPT 180 Query: 168 NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227 E+ +CRP I RQI L P+IL+ +G+ FF + + GKW IP Sbjct: 181 PREVALCRPFIERQILLAKPRILIALGSTAAQFFTGIQS-GIIRIRGKWLTYENEDLQIP 239 Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + T HP L++ P KK TW + +K L NL Sbjct: 240 VMPTFHPAYLLRTPSQKKLTWMDFLEVKNRLNNL 273 >gi|192289638|ref|YP_001990243.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas palustris TIE-1] gi|192283387|gb|ACE99767.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas palustris TIE-1] Length = 276 Score = 234 bits (597), Expect = 9e-60, Method: Composition-based stats. Identities = 77/277 (27%), Positives = 120/277 (43%), Gaps = 21/277 (7%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVF----------DEPNNEATYESQRKEKSIDSAI 50 MT S Q+L FY D+GV D P+ A + + A+ Sbjct: 1 MTPDPAPSLRQLLA---FYLDAGVDCALAEGPVNRMLDDAPDPAAREAAPEPRPIVKPAL 57 Query: 51 QPITNIR-------HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICAT 103 + A A A +L L+ L++ F C L +T+ + A Sbjct: 58 HAKPPPPLAFGAPPASPDAAIISAREAAATAPTLEALRELMQRFDGCALRATATQLVFAD 117 Query: 104 QTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGN 163 +M +G P ++I G PF G++G +LD ML +I + R ++I+ + PW PPGN Sbjct: 118 GNPQAKVMFVGEAPGRDEDIEGLPFVGRSGKLLDLMLAAIGLNRGNVYIANVIPWRPPGN 177 Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH 223 R + E +IC P I RQIEL++P +L+ +GN + + G+W + T Sbjct: 178 RTPTPQETQICLPFIRRQIELVNPDLLVTLGNPSTQALLGTRDGIM-RTRGRWFDYDTGT 236 Query: 224 SIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 I L T+HP L++ P K+ W L + AL Sbjct: 237 RTIRALPTLHPAYLLRQPTYKRLAWQDLRAIATALAA 273 >gi|307941594|ref|ZP_07656949.1| DNA polymerase [Roseibium sp. TrichSKD4] gi|307775202|gb|EFO34408.1| DNA polymerase [Roseibium sp. TrichSKD4] Length = 307 Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 77/305 (25%), Positives = 132/305 (43%), Gaps = 46/305 (15%) Query: 2 TSKRILSQEQILTIALFYADSGVYWVFDE-PNNEATYESQ-------------------- 40 LS+ ++ + FY SGV +E P + ++ Sbjct: 1 MENNTLSKREVEALIDFYLASGVDGFLEEEPVDRFAAPAKPPVSLADFQSPATQTPNSPP 60 Query: 41 -------------------RKEKSIDSAIQPITNIRH-----IHSPLVQQADSIAQKACS 76 R ++ ++ PI + A A A S Sbjct: 61 NQRGQQPVSSAGPAAQQQGRPPQTPPASASPIPAAPQGGAVIPDQAAINSARERALTAQS 120 Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L EL+ LL +F C+L T+ + + A +M +G P ++I GKPF G++G +L Sbjct: 121 LDELRELLGTFEGCNLRLTAKNLVFADGNPVAKVMFVGEAPGRDEDILGKPFVGRSGQLL 180 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 D+ML +I + R+ +I+ + PW PPGNR + E E+C+P I RQI L +P +L+F+G Sbjct: 181 DRMLTAIGLDRSSAYIANVVPWRPPGNRTPTPQETELCKPFIQRQITLANPDVLVFLGAA 240 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 + + + G+W + IP +AT HP L++ PL K+ +W + ++ Sbjct: 241 SAKSLLDVK-DGIRRLRGQWKEYDSGSRKIPCVATYHPAYLLRSPLEKRLSWRDFLAIRA 299 Query: 257 ALKNL 261 L ++ Sbjct: 300 KLDDM 304 >gi|49474043|ref|YP_032085.1| DNA polymerase [Bartonella quintana str. Toulouse] gi|49239547|emb|CAF25904.1| DNA polymerase, bacteriophage type [Bartonella quintana str. Toulouse] Length = 275 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 94/276 (34%), Positives = 133/276 (48%), Gaps = 23/276 (8%) Query: 3 SKRILSQEQILTIALFYADSGVYWVF-DEPNNEA---------------TYESQRKEKSI 46 S+ +S E++L+ FY +SGV V D P + T Q +I Sbjct: 5 SQYSISYEELLS---FYKESGVDAVLSDVPIDRFSQASSSTQELKKVIDTPHHQSVSPTI 61 Query: 47 DSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTE 106 P+ + I A IA+ A +L ELKS L F+ C L T+ ST + T Sbjct: 62 KQHSYPLPHSSTIQREP--SAIEIAKSANTLDELKSALLVFNGCSLKLTAKSTCFSDGTA 119 Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL 166 G LMIIG P ++I G PF GK G +L+K+L SI + R ++I+ PW PPGNR Sbjct: 120 GSPLMIIGEAPGREEDIQGIPFVGKAGMLLNKILASIGLTRKNVYIANTIPWRPPGNRTP 179 Query: 167 SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS-I 225 + E+ +CRP I RQI L +P+IL+ +G F + GKW + + Sbjct: 180 TPREVALCRPFIERQIHLANPRILIALGGVAMQ-FLTGSQNGIIRTRGKWCTYESEDNIK 238 Query: 226 IPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 IP + T HP L++ P KK TW + +K L NL Sbjct: 239 IPVMPTFHPAYLLRTPSQKKLTWRDFLEVKNRLNNL 274 >gi|86748208|ref|YP_484704.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas palustris HaA2] gi|86571236|gb|ABD05793.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas palustris HaA2] Length = 277 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 80/275 (29%), Positives = 126/275 (45%), Gaps = 19/275 (6%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNE---------ATYESQRKEKSIDSAI 50 MT + S +Q+L FY ++GV DEP N A ++ Sbjct: 1 MTPEPAPSLKQLLA---FYLEAGVDCALTDEPINRMLDDETATPAIADAPVARADTIRPP 57 Query: 51 QPITNI-----RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQT 105 P + A A A +L L++L+ F C L ST+ + A Sbjct: 58 APRPTALPGVAPPSPEAAIVSAREAAATAPTLEALRALMEQFEGCALRSTATRLVFADGN 117 Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRN 165 LM++G P ++I G PF G++G +LD ML +I + R+Q++I+ + PW PPGNR Sbjct: 118 PQARLMLVGEAPGREEDIEGLPFVGRSGKLLDLMLAAIGLDRSQVYIANVIPWRPPGNRT 177 Query: 166 LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI 225 + E +IC P I RQIEL++P IL+ +GN + + + G+W + + Sbjct: 178 PTPQETQICLPFIKRQIELVNPAILVTLGNPSTQTLLS-TRDGITRTRGRWFDYDNGTRM 236 Query: 226 IPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 I + T+HP L++ P K+ W L + AL Sbjct: 237 IRAMPTLHPAYLLRQPTYKRLAWQDLRAIATALAA 271 >gi|121602683|ref|YP_988758.1| uracil-DNA glycosylase [Bartonella bacilliformis KC583] gi|120614860|gb|ABM45461.1| uracil-DNA glycosylase, family 4 [Bartonella bacilliformis KC583] Length = 275 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 95/271 (35%), Positives = 134/271 (49%), Gaps = 19/271 (7%) Query: 6 ILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEK-----SIDSAIQPITNIRHI 59 +S E++L+ FY +SG DEP N ++K I S Q I+ Sbjct: 8 PISYEELLS---FYKESGADAALADEPINRFNQSPSSEQKLKQTCDIPSHQQTPPTIKLN 64 Query: 60 HSPL--------VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLM 111 PL A +A+ A +L ELKS L +F C L T+ +T + T G LM Sbjct: 65 APPLNHPDTTQHALSAIEMAKNAKTLDELKSALLAFDGCSLKMTAKNTCFSDGTAGSPLM 124 Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEM 171 +IG P ++I G PF GK G +L+K+L SI + R ++I+ PW PPGNR + EM Sbjct: 125 LIGEAPGREEDIQGIPFVGKAGILLNKILASIGLTRENVYIANTVPWRPPGNRTPTAREM 184 Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS-IIPTLA 230 +CRP I RQI+L +P+IL+ +G FF + + GKW T IP + Sbjct: 185 ALCRPFIERQIQLANPRILVALGGTAVQFFTGTQSGIV-RIRGKWLTYETEDKVKIPVMP 243 Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALKNL 261 T HP L++ P KK TW + +K L NL Sbjct: 244 TFHPAYLLRTPSQKKLTWIDFLEVKNRLNNL 274 >gi|163867968|ref|YP_001609172.1| phage SPO1 DNA polymerase-related protein [Bartonella tribocorum CIP 105476] gi|161017619|emb|CAK01177.1| phage SPO1 DNA polymerase-related protein [Bartonella tribocorum CIP 105476] Length = 279 Score = 233 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 87/274 (31%), Positives = 130/274 (47%), Gaps = 23/274 (8%) Query: 7 LSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSID---------SAIQPITNI 56 +S E++L+ FY +SG V D P + ++KS + + Sbjct: 9 ISYEELLS---FYKESGADAVLADLPIDRFKQSFSSEKKSTPVVSVSHHQQRSPTTSPTV 65 Query: 57 RHIHSPL--------VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQ 108 + H PL A A+ A +L ELKS L +F+ C L T+ +T + T G Sbjct: 66 KLDHQPLHNSRAIQNEPAAIESAKSAKTLDELKSALLAFNGCSLKLTAKNTCFSDGTAGS 125 Query: 109 DLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSN 168 LM+IG P ++I G PF GK G +L+K+L SI + R ++I+ PW PPGNR + Sbjct: 126 PLMLIGEAPGREEDIQGVPFVGKAGMLLNKILASIGLTRNNVYIANTIPWRPPGNRTPTP 185 Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS-IIP 227 E+ +CRP I R I L P++L+ +G F + GKW + + IP Sbjct: 186 REIALCRPFIERHIYLARPRVLIALGGVAAQ-FLTGSQSGIIRTRGKWHIYESEDNIKIP 244 Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + T HP L++ P KK TW + +K L NL Sbjct: 245 VMPTFHPAYLLRTPSQKKLTWIDFLEVKNRLDNL 278 >gi|90425831|ref|YP_534201.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas palustris BisB18] gi|90107845|gb|ABD89882.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas palustris BisB18] Length = 277 Score = 233 bits (593), Expect = 3e-59, Method: Composition-based stats. Identities = 79/277 (28%), Positives = 128/277 (46%), Gaps = 20/277 (7%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYE---------------SQRKEK 44 MT + + ++L FY ++GV DEP N + S + + Sbjct: 1 MTPEPRPNARELLA---FYLEAGVDCALMDEPVNRLLDDIAPEPARPPAEPRLVSPQPQP 57 Query: 45 SIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQ 104 + A+ + A A+ A SL L+ LL +F C L +T+ + A Sbjct: 58 ATPRAVPTAAAPALAPDAAILSAREAARTAPSLQALRELLAAFDGCALKATATQLVFADG 117 Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 +M++G P ++I G PF G++G +LD+ML SI + R+ ++I+ + PW PPGNR Sbjct: 118 NPQARIMLVGEAPGREEDIEGLPFVGRSGKLLDRMLASIGLDRSTVYIANVIPWRPPGNR 177 Query: 165 NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS 224 + E + C P RQIEL+ P +L+ +GN + + G+W + T Sbjct: 178 TPTPQETQTCLPFTQRQIELVDPDLLVTLGNPSTQTLLATREGIM-KTRGRWVDYDTGSR 236 Query: 225 IIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 I L T HP L++ P K+ W L + KAL++L Sbjct: 237 RIRALPTFHPAYLLRSPSYKRMAWQDLRAIAKALEDL 273 >gi|240850173|ref|YP_002971566.1| phage SPO1 DNA polymerase-related protein [Bartonella grahamii as4aup] gi|240267296|gb|ACS50884.1| phage SPO1 DNA polymerase-related protein [Bartonella grahamii as4aup] Length = 276 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 85/271 (31%), Positives = 126/271 (46%), Gaps = 20/271 (7%) Query: 7 LSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSA-----IQPITNIRHIH 60 +S E++ FY +SG V + P N + + K I Q ++ H Sbjct: 9 ISYEEL---LNFYKESGADAVLTNFPINRFKQSACSESKLISVVNISHNQQTSPTVKLDH 65 Query: 61 SPL---------VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLM 111 PL A A A +L ELKS L +F+ C L T+ +T + T G LM Sbjct: 66 RPLHNSRGAIQNEPTAIESANNAKTLDELKSALLAFNGCSLKLTAKNTCFSDGTAGSPLM 125 Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEM 171 +IG P ++I G PF GK G +L+K+L SI + R ++I+ PW PPGNR + E+ Sbjct: 126 LIGEAPGREEDIQGIPFVGKAGMLLNKILASIGLTRNNVYIANTIPWRPPGNRTPTPREV 185 Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS-IIPTLA 230 +CRP I R I L P++L+ +G + GKW + + IP + Sbjct: 186 ALCRPFIERHIYLARPRVLIALGGIAAQ-LLTGSQNGIIRTRGKWHIYESEDNIKIPVMP 244 Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALKNL 261 T HP L++ P KK TW + +K L +L Sbjct: 245 TFHPAYLLRTPSQKKLTWIDFLEVKNRLDSL 275 >gi|319405336|emb|CBI78954.1| phage SPO1 DNA polymerase-related protein [Bartonella sp. AR 15-3] Length = 273 Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats. Identities = 88/274 (32%), Positives = 125/274 (45%), Gaps = 15/274 (5%) Query: 2 TSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEK-------------SID 47 SK+ + FY +SGV D P + + + S Sbjct: 1 MSKKDKDVILNEDLLSFYKESGVDTALTDVPIDHFNQAIPLEPQLNQACDISYHQKISPT 60 Query: 48 SAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEG 107 + V A IA+ A +L ELKS L SF+ C L T+ +T + T G Sbjct: 61 IKSHTPLLNNPDKTQPVLSAVEIAKNAQTLDELKSALLSFNGCLLKLTAQNTCFSDGTAG 120 Query: 108 QDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLS 167 LM+IG P ++I G PF GK G +L+K+L SI + R ++I+ PW PPGNR + Sbjct: 121 SPLMLIGEAPGREEDIQGIPFVGKAGILLNKILASIGLTRQNVYIANTIPWRPPGNRTPT 180 Query: 168 NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227 E+ +CRP I RQI L P+IL+ +G+ FF + + GKW IP Sbjct: 181 PREIALCRPFIERQILLAKPRILIALGSTAVQFFTGIQS-GIIRIRGKWLTYENEDLKIP 239 Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + T HP L++ P KK TW + +K L NL Sbjct: 240 VMPTFHPAYLLRTPSQKKLTWIDFLEVKNRLNNL 273 >gi|13476397|ref|NP_107967.1| hypothetical protein mll7705 [Mesorhizobium loti MAFF303099] gi|14027158|dbj|BAB54112.1| mll7705 [Mesorhizobium loti MAFF303099] Length = 291 Score = 232 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 83/291 (28%), Positives = 132/291 (45%), Gaps = 31/291 (10%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPITNIRHI 59 MT+ S I I FYA +GV D P N + R + + + P + Sbjct: 1 MTAASPNSPTDIADILAFYASAGVDEALEDAPVNRFAEAAPRPVERAPAPVAPPREEKAP 60 Query: 60 HSPLVQQ---ADSIAQKAC-------------------------SLHELKSLLRSFHDCH 91 P A + +L EL+ + +F C+ Sbjct: 61 ERPAAPPGLDASKVPDAPPARSSVAAVPDEAQAALARQLATTATTLDELRQHMAAFDGCN 120 Query: 92 LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH 151 L +T+ + + A +M++G P ++I G PF G++G +LD+ML +I + RT ++ Sbjct: 121 LKATAKNLVFADGNPDAAVMLVGEAPGRDEDIEGLPFVGRSGRLLDRMLAAIGLDRTSVY 180 Query: 152 ISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQ 211 I+ + PW PPGNR + E EICRP I RQIEL++PK+L+ +G + N ++ + Sbjct: 181 IANVIPWRPPGNRTPTPHETEICRPFIERQIELVNPKVLVNLGGPSAKTLLN-TSEGILR 239 Query: 212 NLGKWSNLCTPHSI-IPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 G W T I IP + T+HP L++ P KK W + +K L+ L Sbjct: 240 LRGNWRVHTTASGIAIPAMPTLHPAYLLRTPAHKKLAWRDFLEVKAKLRAL 290 >gi|91975690|ref|YP_568349.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas palustris BisB5] gi|91682146|gb|ABE38448.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas palustris BisB5] Length = 282 Score = 232 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 82/281 (29%), Positives = 126/281 (44%), Gaps = 24/281 (8%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNE-----------ATYESQRKEK---- 44 MT + S +Q+L FY ++GV DEP N A Sbjct: 1 MTPEPAPSLQQLLA---FYLEAGVDCALNDEPINRLLDDAIAVPIQAETSEAAPRPDTEK 57 Query: 45 ----SIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI 100 + QP I + + A A A SL L++L+ F C L ST+ + Sbjct: 58 IRSLAPRPRAQPAGAIPPLPEAAIVSAREAAATAPSLDALRALMEQFDGCALRSTATRLV 117 Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160 A +M++G P ++I G PF G++G +LD ML +I + R++++I+ + PW P Sbjct: 118 FADGNPKASIMLVGEAPGREEDIEGLPFVGRSGKLLDLMLAAIGLDRSKVYIANVIPWRP 177 Query: 161 PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220 PGNR + E +IC P I RQIEL+ P IL+ +GN + + + G+W + Sbjct: 178 PGNRTPTPQETQICLPFIRRQIELVDPAILVTLGNPSTQALLSTRDGIM-RTRGRWFDYH 236 Query: 221 TPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 I L T+HP L++ P K+ W L + A L Sbjct: 237 NGARTIRALPTLHPAYLLRQPTYKRLAWQDLRAIATAFAAL 277 >gi|316932577|ref|YP_004107559.1| phage SPO1 DNA polymerase-like protein [Rhodopseudomonas palustris DX-1] gi|315600291|gb|ADU42826.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas palustris DX-1] Length = 275 Score = 231 bits (590), Expect = 6e-59, Method: Composition-based stats. Identities = 77/274 (28%), Positives = 120/274 (43%), Gaps = 20/274 (7%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPI------ 53 M + S Q+L FY D+GV D P N E+ + Sbjct: 1 MIPDPVPSLRQLLA---FYLDAGVDCALADAPVNRMLDEAPAPAGHEATEPSRAVKPALQ 57 Query: 54 ---------TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQ 104 + A A A +L L+ L++ F C L T+ + A Sbjct: 58 AQPAPPPPRATQPATPDAAIVSAREAAATAPTLEALRDLMQQFDGCALRGTAKQLVFADG 117 Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 LM++G P ++I G PF G++G +LD ML +I + R++++I+ + PW PPGNR Sbjct: 118 NPQAKLMLVGEAPGRDEDIEGLPFVGRSGKLLDLMLAAIGLDRSKVYIANVIPWRPPGNR 177 Query: 165 NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS 224 + E +IC P I RQIEL++P +L+ +GN + + G+W + T Sbjct: 178 TPTPQETQICLPFIKRQIELVNPDLLVTLGNPSTQALLGTRDGIM-RTRGRWFDYDTGTR 236 Query: 225 IIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 I L T+HP L++ P K+ W L + AL Sbjct: 237 TIRALPTLHPAYLLRQPTYKRLAWQDLRAIATAL 270 >gi|154251174|ref|YP_001411998.1| phage SPO1 DNA polymerase-like protein [Parvibaculum lavamentivorans DS-1] gi|154155124|gb|ABS62341.1| phage SPO1 DNA polymerase-related protein [Parvibaculum lavamentivorans DS-1] Length = 290 Score = 231 bits (590), Expect = 6e-59, Method: Composition-based stats. Identities = 75/284 (26%), Positives = 125/284 (44%), Gaps = 27/284 (9%) Query: 3 SKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHS 61 S ++ E+ + FY ++GV + DEP N + + + R I + Sbjct: 4 SGPDMTPEEAAALLSFYVEAGVTDALGDEPVNRYALADEAARSAPVPLARAPEAPRTIRA 63 Query: 62 PLVQQ-------------------------ADSIAQKACSLHELKSLLRSFHDCHLCSTS 96 + A A + +L EL+ L +F C L T+ Sbjct: 64 DPRGEMAPPPAARVAAPAAIPLEDAQAAESAQIAAARCNTLEELRQTLAAFEGCPLRYTA 123 Query: 97 LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156 + + A +M++G P +++ G PF G++G +LD+ML +I + RT ++I+ Sbjct: 124 KNLVFADGNPQARIMLVGEAPGRDEDLQGLPFVGRSGQLLDRMLAAIGLDRTSVYIANTL 183 Query: 157 PWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKW 216 PW PPGNR + E IC P I R IEL++PK+LL +G + D + G+W Sbjct: 184 PWRPPGNRTPTPAEHAICMPFIERHIELMAPKVLLLLGGVSAKQLLRTDTGIM-RLRGRW 242 Query: 217 SNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 + IP L T+HP L++ P K+ W L++ + L Sbjct: 243 TTARIGECDIPALPTLHPAYLLRQPAQKRLAWRDLMSFRAWLDE 286 >gi|319408256|emb|CBI81909.1| phage SPO1 DNA polymerase-related protein [Bartonella schoenbuchensis R1] Length = 276 Score = 231 bits (588), Expect = 9e-59, Method: Composition-based stats. Identities = 86/272 (31%), Positives = 135/272 (49%), Gaps = 20/272 (7%) Query: 6 ILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAI-------------- 50 ++S E++L+ FY +SGV D P + + + ++KS + Sbjct: 8 LISYEELLS---FYKESGVDAALNDTPIDRFSQSAILEQKSKQAVDIIHHKQTSQPIKLH 64 Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 + + A +A+ A +L ELKS L +F+ C L T+ +T + T G L Sbjct: 65 NKPPHNLDNKTHDTLSAIEMAKNAHTLDELKSALLAFNGCSLKLTAKNTCFSDGTAGSPL 124 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170 M+IG P ++I G PF GK G +L+K+L SI + R ++I+ PW PPGNR + E Sbjct: 125 MLIGEAPGRDEDIQGIPFVGKAGMLLNKILASIGLTRKNVYIANTIPWRPPGNRTPTPRE 184 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS-IIPTL 229 + +CRP I RQIEL +P++L+ +G F + GKW + ++ IP + Sbjct: 185 VALCRPFIERQIELANPRVLIALGGTAAQFLTGAQG-GIIRIRGKWQIYESANNVKIPVM 243 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 T HP L++ P KK TW + +K L NL Sbjct: 244 PTFHPAYLLRTPSQKKLTWMDFLEVKDRLNNL 275 >gi|269958378|ref|YP_003328165.1| putative DNA glycosylase [Anaplasma centrale str. Israel] gi|269848207|gb|ACZ48851.1| putative DNA glycosylase [Anaplasma centrale str. Israel] Length = 289 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 68/261 (26%), Positives = 122/261 (46%), Gaps = 11/261 (4%) Query: 10 EQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPI--------TNIRHIHS 61 E++L + FY ++GV V +E EA + ++ + + Sbjct: 23 EELLEVLRFYHENGVDCVLEEGGLEARTPAVVSQEQDVGTSRAGRLSEQGADKGESQFST 82 Query: 62 PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121 V A IA L EL++ + SF C + +++T+ + +M+IG P ++ Sbjct: 83 DWVTAARKIAGGCSDLAELRAAIESFEGCEIKKAAMNTVFSDGNPDARIMLIGEAPGSNE 142 Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ 181 + G+PF G +G +LDKML +I + R +IS + W PPGNR ++ E+EIC+P + + Sbjct: 143 DREGRPFCGASGMLLDKMLAAIGLNRKSTYISNTTFWRPPGNRRPTDFELEICKPFVEKH 202 Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL--ATVHPQELIQ 239 I LI+P IL+ +G+ N + + G++ P P HP L++ Sbjct: 203 IALIAPSILVLVGSTACCALLN-TPESISRLRGRFHEYTNPFLAHPVTTAVIFHPAYLLR 261 Query: 240 YPLIKKNTWHALITLKKALKN 260 P+ K+ W L ++ ++ Sbjct: 262 QPMQKRLAWEDLKMIRAYIEQ 282 >gi|260462363|ref|ZP_05810571.1| phage SPO1 DNA polymerase-related protein [Mesorhizobium opportunistum WSM2075] gi|259031857|gb|EEW33125.1| phage SPO1 DNA polymerase-related protein [Mesorhizobium opportunistum WSM2075] Length = 298 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 82/292 (28%), Positives = 133/292 (45%), Gaps = 33/292 (11%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPITNIRHI 59 MT+ S +I I FYA +GV D P N + R + + + + Sbjct: 8 MTAAPN-SPTEIADILAFYASAGVDEALEDAPVNRFAEAAPRPVERAPAPLPSPREDKTP 66 Query: 60 HSPLVQQ-----------------------------ADSIAQKACSLHELKSLLRSFHDC 90 P A +A A +L EL+ + +F C Sbjct: 67 ERPAASSGLDASKVPDAPVRTVSATAAVPDEAQAALARQMATSASTLEELRQHMAAFEGC 126 Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150 +L +T+ + + A +M++G P ++I G PF G++G +LD+ML +I + R+ + Sbjct: 127 NLKATAKNLVFADGNPQAAVMLVGEAPGRDEDIEGLPFVGRSGRLLDRMLAAIGLDRSSV 186 Query: 151 HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210 +I+ + PW PPGNR + E EICRP I RQIEL++PK+L+ +G + N ++ Sbjct: 187 YIANVIPWRPPGNRTPTPHETEICRPFIERQIELLNPKVLVNLGGPSAKTLLN-TSEGIL 245 Query: 211 QNLGKWSNLCT-PHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + G W T IP + T+HP L++ P KK W + +K L+ L Sbjct: 246 RLRGNWRAHTTASGVTIPAMPTLHPAYLLRTPAHKKLAWRDFLEVKAKLRAL 297 >gi|190571317|ref|YP_001975675.1| putative DNA glycosylase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190357589|emb|CAQ55030.1| putative DNA glycosylase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 257 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 71/256 (27%), Positives = 130/256 (50%), Gaps = 8/256 (3%) Query: 7 LSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQ 66 ++ E + + FY + GV E E E++R +S + S + + Sbjct: 1 MNNEDL-ELLKFYHEVGVDCTLTEGEEEKKVENERAAQSSVIEQKK----AMFPSDWIIE 55 Query: 67 ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126 A +A + S+ EL+S ++SF C + T+ +T+ + +M++G P ++++ G Sbjct: 56 ARKLASECGSVDELRSAVKSFEGCEIKKTATNTVFSDGNPNAKIMLVGEAPGANEDLKGI 115 Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186 PF G +G +LDKML +I + RT+++IS W PPGNR +++E+++CRP + + I L+ Sbjct: 116 PFCGASGMLLDKMLGAINLDRTKVYISNTVFWRPPGNRKPTDLELDMCRPFVEKHIALVL 175 Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATVHPQELIQYPLIK 244 P+IL+F+G + + + GK+ + I T A HP L++ P K Sbjct: 176 PQILIFVGGIACYSLLD-NTKTISNLRGKFHTYTNQYLSHAITTAAIFHPAYLLRQPAQK 234 Query: 245 KNTWHALITLKKALKN 260 + W L +++ L N Sbjct: 235 RLAWEDLKKIREYLDN 250 >gi|110633263|ref|YP_673471.1| phage SPO1 DNA polymerase-related protein [Mesorhizobium sp. BNC1] gi|110284247|gb|ABG62306.1| phage SPO1 DNA polymerase-related protein [Chelativorans sp. BNC1] Length = 285 Score = 230 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 85/284 (29%), Positives = 133/284 (46%), Gaps = 25/284 (8%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQ---------RKEKSIDSAI 50 MTS L I + FY+++G +E + R +S +A Sbjct: 1 MTSTTPLDFAGIRELLAFYSEAGADEALWEEAQDRFAEAKASAQTFSETVRPAQSDAAAP 60 Query: 51 QPITNIRHIHSPLVQQ-------------ADSIAQKACSLHELKSLLRSFHDCHLCSTSL 97 QP + A +A++A +L ELK +L F C+L T+ Sbjct: 61 QPENRATQPKPAPISAQPAAVPDEAQAAHAREVARQARTLDELKEILAGFEGCNLRLTAK 120 Query: 98 STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP 157 + + A DLM++G P +++ G PF G++G +L++ML +I R+ +I+ + P Sbjct: 121 NLVFADGNPQADLMLVGEAPGRDEDLQGLPFVGRSGQLLNRMLAAIGRDRSTAYIANVIP 180 Query: 158 WHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS 217 W PPGNR+ S +E EICRP I R IEL++PK+L+ +GN + + G WS Sbjct: 181 WRPPGNRDPSPLETEICRPFIERHIELVAPKLLVTLGNPSTKLLLGTQTGIM-RLRGTWS 239 Query: 218 NLCT-PHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 T IPT+ T+HP L++ P KK W + +K L N Sbjct: 240 VHRTAGGLEIPTMPTLHPAYLLRNPAHKKLAWRDFLAVKMRLAN 283 >gi|49475280|ref|YP_033321.1| DNA polymerase [Bartonella henselae str. Houston-1] gi|49238086|emb|CAF27293.1| DNA polymerase, bacteriophage type [Bartonella henselae str. Houston-1] Length = 275 Score = 230 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 88/270 (32%), Positives = 136/270 (50%), Gaps = 19/270 (7%) Query: 7 LSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSA-----IQPITNIRHIH 60 ++ E++L+ FY +SGV D P + + + ++KS Q +I+ + Sbjct: 9 ITYEELLS---FYKESGVDTALTDLPIDRFSQSASLEKKSTQVVKISHNQQTSPSIKLDN 65 Query: 61 SPLVQQ--------ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMI 112 PL A A+ A +L ELKS L +F+ C L T+ +T + T G LM+ Sbjct: 66 HPLSNSTIIQGELSAIESAKNANTLDELKSALLAFNGCSLKLTAKNTCFSDGTAGSPLML 125 Query: 113 IGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEME 172 IG P ++I G PF GK G +L+K+L SI + R ++I+ PW PPGNR + E+ Sbjct: 126 IGEAPGREEDIQGIPFVGKAGMLLNKILASIGLTRNSVYIANTIPWRPPGNRTPTPREVA 185 Query: 173 ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS-IIPTLAT 231 +CRP I RQI L +P+IL+ +G F + GKW + ++ IP + T Sbjct: 186 LCRPFIERQIYLANPRILIALGGVATQ-FLTGAQNGIIRTRGKWLTYKSENNIKIPVMPT 244 Query: 232 VHPQELIQYPLIKKNTWHALITLKKALKNL 261 HP L++ P KK TW + +K L +L Sbjct: 245 FHPAYLLRTPSQKKLTWLDFLEVKNRLDSL 274 >gi|56417232|ref|YP_154306.1| hypothetical protein AM1237 [Anaplasma marginale str. St. Maries] gi|222475596|ref|YP_002564013.1| hypothetical protein AMF_934 [Anaplasma marginale str. Florida] gi|56388464|gb|AAV87051.1| hypothetical protein AM1237 [Anaplasma marginale str. St. Maries] gi|222419734|gb|ACM49757.1| Conserved hypothetical protein [Anaplasma marginale str. Florida] Length = 290 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 69/260 (26%), Positives = 124/260 (47%), Gaps = 11/260 (4%) Query: 11 QILTIALFYADSGVYWVFDE--------PNNEATYESQRKEKSIDSAIQPITNIRHIHSP 62 ++L + FY ++GV V +E P + + + Q + Sbjct: 25 ELLEVLKFYHENGVDCVLEEDGPGTCAPPVAALQEQEGCTLQVGSPSEQMDAGASQFSTD 84 Query: 63 LVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDN 122 V A SIA K +L EL+ + +F C + +++T+ + +M+IG P +++ Sbjct: 85 WVAAAKSIADKCGTLAELREAVEAFEGCEIKKAAMNTVFSDGNPNAKIMLIGEAPGSNED 144 Query: 123 ISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQI 182 G+PF G +G +LDKML +I + R +IS + W PPGNR ++ E+EIC+P + + I Sbjct: 145 REGRPFCGASGMLLDKMLAAIGLDRKSTYISNTTFWRPPGNRRPTDFELEICKPFVEKHI 204 Query: 183 ELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATVHPQELIQY 240 LI+P IL+ +G+ + + + G++ P I T HP L++ Sbjct: 205 ALIAPSILVLVGSTACCSLLS-TPESISRLRGRFHEYANPFLAHPIKTAVIFHPAYLLRQ 263 Query: 241 PLIKKNTWHALITLKKALKN 260 P+ K+ W L ++ ++N Sbjct: 264 PMQKRLAWEDLKMIRSHIEN 283 >gi|254475928|ref|ZP_05089314.1| uracil-DNA glycosylase [Ruegeria sp. R11] gi|214030171|gb|EEB71006.1| uracil-DNA glycosylase [Ruegeria sp. R11] Length = 275 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 64/260 (24%), Positives = 114/260 (43%), Gaps = 10/260 (3%) Query: 3 SKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHS 61 + L + + + G + D P N E+++ + + A P + + Sbjct: 23 MESALDYHSARALLAWQIELGATDAICDAPVNRYELEARQPKPTARQAEAPPPKPKEV-- 80 Query: 62 PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121 V+ A IA+ L LK+ L F C L + + + + G +M+IG P + Sbjct: 81 DPVEVARDIARGVRDLAGLKAALAQFEHCDLRKGARNLVFSDGKPGARVMVIGEAPGRDE 140 Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMR 180 ++ G+PF G+ G +LD+ML +I + R +I+ + PW PP NR+ E+ + P + R Sbjct: 141 DLEGRPFVGRAGQLLDRMLAAIGLSRQDNVYITNVLPWRPPQNRDPLPAEIAMMTPFLER 200 Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 + L +P IL+ +GN + + + G W P + HP L++ Sbjct: 201 HVALANPDILIAMGNISCDALMGKRG--ITRLRGTWGEAWGK----PVMPMFHPAYLLRQ 254 Query: 241 PLIKKNTWHALITLKKALKN 260 PL K+ W L+ +K L Sbjct: 255 PLQKRAAWSDLLDIKSRLDA 274 >gi|254995400|ref|ZP_05277590.1| hypothetical protein AmarM_05693 [Anaplasma marginale str. Mississippi] gi|255003587|ref|ZP_05278551.1| hypothetical protein AmarPR_05168 [Anaplasma marginale str. Puerto Rico] gi|255004718|ref|ZP_05279519.1| hypothetical protein AmarV_05513 [Anaplasma marginale str. Virginia] Length = 279 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 69/260 (26%), Positives = 124/260 (47%), Gaps = 11/260 (4%) Query: 11 QILTIALFYADSGVYWVFDE--------PNNEATYESQRKEKSIDSAIQPITNIRHIHSP 62 ++L + FY ++GV V +E P + + + Q + Sbjct: 14 ELLEVLKFYHENGVDCVLEEDGPGTCAPPVAALQEQEGCTLQVGSPSEQMDAGASQFSTD 73 Query: 63 LVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDN 122 V A SIA K +L EL+ + +F C + +++T+ + +M+IG P +++ Sbjct: 74 WVAAAKSIADKCGTLAELREAVEAFEGCEIKKAAMNTVFSDGNPNAKIMLIGEAPGSNED 133 Query: 123 ISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQI 182 G+PF G +G +LDKML +I + R +IS + W PPGNR ++ E+EIC+P + + I Sbjct: 134 REGRPFCGASGMLLDKMLAAIGLDRKSTYISNTTFWRPPGNRRPTDFELEICKPFVEKHI 193 Query: 183 ELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATVHPQELIQY 240 LI+P IL+ +G+ + + + G++ P I T HP L++ Sbjct: 194 ALIAPSILVLVGSTACCSLLS-TPESISRLRGRFHEYANPFLAHPIKTAVIFHPAYLLRQ 252 Query: 241 PLIKKNTWHALITLKKALKN 260 P+ K+ W L ++ ++N Sbjct: 253 PMQKRLAWEDLKMIRSHIEN 272 >gi|83591606|ref|YP_425358.1| phage SPO1 DNA polymerase-like protein [Rhodospirillum rubrum ATCC 11170] gi|83574520|gb|ABC21071.1| Phage SPO1 DNA polymerase-related protein [Rhodospirillum rubrum ATCC 11170] Length = 315 Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats. Identities = 73/278 (26%), Positives = 123/278 (44%), Gaps = 28/278 (10%) Query: 11 QILTIALFYADSGVY-WVFDEPNNEATYESQRK-----------------EKSIDSAIQP 52 + + +Y ++GV V D P + + + + P Sbjct: 35 DLAGLLGWYLEAGVDLAVGDSPLDRYALSERAPVPRVAPPAARPPTPAASRPTGRTPGGP 94 Query: 53 ------ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTE 106 + + + A +A +A SL +L++ L SF C L T+ T+ A Sbjct: 95 RIEDGGPNDEPPTQAESQRAASFLAAQAGSLEDLRTALDSFRSCALRRTATQTVFADGCP 154 Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRN 165 +MIIG P ++ G+PF G +G +LD ML SI + R +I+ + PW PPGNR Sbjct: 155 QSGMMIIGEAPGADEDRLGRPFVGVSGKLLDAMLGSIGLDRADSCYITNVVPWRPPGNRK 214 Query: 166 LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH-- 223 + E+ +C P + R I L+ P+++L +G F ++ + G W + P Sbjct: 215 PTADEVALCLPFLERHIALVRPRLILAVGGLAAQALFG-RSEGITRLRGHWHDYEGPGLD 273 Query: 224 SIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 +P LAT HP L++ P K+ W L+ L++ L +L Sbjct: 274 RSVPVLATFHPAYLLRTPAQKRLAWRDLLALRQRLDSL 311 >gi|319784543|ref|YP_004144019.1| phage SPO1 DNA polymerase-related protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170431|gb|ADV13969.1| phage SPO1 DNA polymerase-related protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 296 Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats. Identities = 83/293 (28%), Positives = 134/293 (45%), Gaps = 33/293 (11%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDE-PNNEATYESQRKEKSIDSAIQPITNIRHI 59 MT+ ++ I + FYA GV +E P N + + + A + Sbjct: 4 MTAASPTNRPDIADLLAFYASVGVDEALEEQPVNRFAEVAPKPMERAPIAAPSGGTAAPL 63 Query: 60 HSPLV--------QQADSIAQK----------------------ACSLHELKSLLRSFHD 89 S V A +A+ A +L EL+ + +F Sbjct: 64 RSTTVSRGEAGDRANAPPVARSPSATTAVPDEAQAALARQLATTATTLDELRQHMAAFEG 123 Query: 90 CHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQ 149 C+L +T+ + + A +M++G P ++I G PF G++G +LD+ML +I + RT Sbjct: 124 CNLKATAKNLVFADGNPEAAVMLVGEAPGRDEDIEGLPFVGRSGRLLDRMLAAIGLDRTS 183 Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209 +I+ + PW PPGNR + E EICRP I RQIEL++PK+L+ +G + N ++ Sbjct: 184 AYIANVIPWRPPGNRTPTPHETEICRPFIERQIELVNPKVLINLGGPSAKTLLN-TSEGI 242 Query: 210 YQNLGKWSNLCTPHSI-IPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + G W T I IP + T+HP L++ P KK W + +K L+ L Sbjct: 243 LRLRGNWRVHTTASGIAIPAMPTLHPAYLLRTPSHKKLAWRDFLEVKAKLRAL 295 >gi|92118685|ref|YP_578414.1| phage SPO1 DNA polymerase-related protein [Nitrobacter hamburgensis X14] gi|91801579|gb|ABE63954.1| phage SPO1 DNA polymerase-related protein [Nitrobacter hamburgensis X14] Length = 289 Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats. Identities = 79/285 (27%), Positives = 129/285 (45%), Gaps = 28/285 (9%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYE--------------------- 38 MTS + +++ FY ++GV D P + + Sbjct: 1 MTSDHAPTVRELMA---FYLEAGVDCALGDGPVDRLSAPDLAAPDLAAPDRPVVAPAGTG 57 Query: 39 --SQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTS 96 K P I ++ A A+ A SL L++LL +F C L T+ Sbjct: 58 PVPAGKPPDRAVTAAPRVGIAPPPEIAIESAREAARTAPSLEALRTLLDTFDGCALKFTA 117 Query: 97 LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156 + A LM +G P ++I G PF G++G +L++M+ +I + R+ ++I+ + Sbjct: 118 SRLVFADGNPHARLMFVGEAPGRDEDIEGLPFVGRSGQLLNRMIAAIGLTRSDVYIANVI 177 Query: 157 PWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKW 216 PW PPGNR + E +IC P I RQIEL++P +L+ +GN + + + GKW Sbjct: 178 PWRPPGNRTPTPQETQICLPFIRRQIELVNPDVLVTLGNPSTQTLL-PTREGIMKTRGKW 236 Query: 217 SNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + T I +AT HP L++ P K+ W L + KALK++ Sbjct: 237 FDYDTDTRTIRAMATFHPAYLLRSPSSKRMAWLDLRAIAKALKDM 281 >gi|182678993|ref|YP_001833139.1| phage SPO1 DNA polymerase-related protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182634876|gb|ACB95650.1| phage SPO1 DNA polymerase-related protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 290 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 77/281 (27%), Positives = 124/281 (44%), Gaps = 31/281 (11%) Query: 10 EQILTIALFYADSGVYWVFDE-PNNEATYESQRKEKSIDSAIQPITNIRH---------- 58 + + + +YA GV DE P++ + + S Q R Sbjct: 3 DSLTALLRWYAAMGVDIALDEAPHDRFAESAAMASRRAPSVPQDDRQARADHPPPSSVSP 62 Query: 59 -------------------IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLST 99 L Q A+ A A +L EL+ L +F C L +T+ Sbjct: 63 SRQQAPAPRQLPGFAQEALSQEALSQNAEEAAASAKTLDELREKLDAFQGCGLKNTATQL 122 Query: 100 ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH 159 + A +MIIG P ++ G+PF G+ G +LD+ML ++++ RTQ++I+ I PW Sbjct: 123 VFADGNPNSSVMIIGEAPGADEDRQGRPFVGRAGQLLDRMLAAVDLDRTQVYIANIVPWR 182 Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 PPGNR + +E+ C P I RQIEL+SP+ ++ +G + + + G+W + Sbjct: 183 PPGNRTPTPLEIAACLPFIRRQIELVSPRFIVCLGAPSAQTLLGTK-EAITRLRGRWRDW 241 Query: 220 CTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 I L +HP L++ P KK W L KAL++ Sbjct: 242 SCGGKTIHVLPMLHPAYLLRQPAEKKRAWADWRLLAKALRD 282 >gi|146339065|ref|YP_001204113.1| putative DNA polymerases [Bradyrhizobium sp. ORS278] gi|146191871|emb|CAL75876.1| putative DNA polymerases [Bradyrhizobium sp. ORS278] Length = 273 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 76/275 (27%), Positives = 122/275 (44%), Gaps = 20/275 (7%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRK---------------EK 44 M + + Q+L FY ++GV D+P N Sbjct: 2 MNPEPLPDVRQLLA---FYLEAGVDCALADDPINRLVEPDAAPAPVAAAARQAAPQPGRS 58 Query: 45 SIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQ 104 + I P + A A+ A +L L+ LL +F C L T+ + A Sbjct: 59 PAPAIISPRGEPPPAPDAAIASARESARTAPTLQALRELLETFDGCALKQTASRLVFADG 118 Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 +M++G P ++I G PF G++G +LD+M+ +I + RT+++I+ + PW PPGNR Sbjct: 119 NPEARVMLVGEAPGRDEDIEGLPFVGRSGKLLDRMIGAIGLDRTKVYIANVIPWRPPGNR 178 Query: 165 NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS 224 + E +IC P I RQIEL+ P +L+ +GN + + GKW + T Sbjct: 179 TPTPQETQICLPFIRRQIELVDPDVLVTLGNPSTQALLGTTEGIM-RTRGKWRDYDTGKR 237 Query: 225 IIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 I +AT HP L++ P K+ +W L + L Sbjct: 238 TIRAIATFHPAYLLRSPSYKRLSWQDLRAIATVLA 272 >gi|58584375|ref|YP_197948.1| Uracil-DNA glycosylase [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58418691|gb|AAW70706.1| Uracil-DNA glycosylase [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 266 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 131/259 (50%), Gaps = 8/259 (3%) Query: 9 QEQILTIALFYADSGVYWVFDEPNNEATYES-----QRKEKSIDSAIQPITNIRHIHSPL 63 +++ L + FY + G+ E N E E + +I + +Q S Sbjct: 2 RDEDLELLKFYYEVGIDCTLTEGNEEKKVEKEKNSKAIQSPTIQAEVQKKEQQSMFPSDW 61 Query: 64 VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123 + +A +A K S+ EL+S ++SF C + TS +T+ + + +M++G P ++++ Sbjct: 62 IIEARKLASKCNSMDELRSAVKSFEGCEIKKTSTNTVFSDGNQSAKIMLVGEAPGANEDL 121 Query: 124 SGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE 183 G PF G +G +LDKML +I + RT+++IS W PPGNR +++E+++CRP + + I Sbjct: 122 KGIPFCGASGMLLDKMLSAINLDRTKVYISNTVFWRPPGNRKPTDLELDMCRPFVEKHIA 181 Query: 184 LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS--IIPTLATVHPQELIQYP 241 LISP IL+ +G + + + + G++ + I T HP L++ P Sbjct: 182 LISPHILILVGGISCYSLLD-NTKTISTLRGRFHTYTNQYLSYSITTAVIFHPAYLLRQP 240 Query: 242 LIKKNTWHALITLKKALKN 260 K+ W L +++ L + Sbjct: 241 AQKRLAWEDLKKIREYLNS 259 >gi|58698049|ref|ZP_00372973.1| phage SPO1 DNA polymerase domain protein [Wolbachia endosymbiont of Drosophila ananassae] gi|225629945|ref|YP_002726736.1| uracil-DNA glycosylase-like protein [Wolbachia sp. wRi] gi|58535406|gb|EAL59481.1| phage SPO1 DNA polymerase domain protein [Wolbachia endosymbiont of Drosophila ananassae] gi|225591926|gb|ACN94945.1| uracil-DNA glycosylase-like protein [Wolbachia sp. wRi] Length = 270 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 71/265 (26%), Positives = 128/265 (48%), Gaps = 13/265 (4%) Query: 7 LSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIR--------- 57 +S E + + FY + GV E E ES+ + + R Sbjct: 1 MSNEDL-ELLKFYHEVGVDCTLMEGEEEKKLESKEPSVIQTGTQKKDADTRWGDTKDGKD 59 Query: 58 HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117 S + +A +A K S+ EL+S ++SF C + T+ +T+ + +M++G P Sbjct: 60 MFPSDWIIEARKLAGKCGSVDELRSAVKSFEGCEIKKTATNTVFSDGNPNAKIMLVGEAP 119 Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177 ++++ G PF G +G +LDKML +I + RT+++IS W PPGNR +++E+++CRP Sbjct: 120 GANEDLQGIPFCGASGMLLDKMLNAINLDRTKVYISNTVFWRPPGNRKPTDLELDMCRPF 179 Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATVHPQ 235 + + I L+SP+IL+ +G ++ G++ + + I T A HP Sbjct: 180 VEKHIALVSPQILILVGGIACYSLLDSTK-TISNLRGRFHTYTNQYLSNSITTAAIFHPA 238 Query: 236 ELIQYPLIKKNTWHALITLKKALKN 260 L++ P K+ W +++ L N Sbjct: 239 YLLRQPAQKRLAWEDSKKIREYLDN 263 >gi|75676780|ref|YP_319201.1| phage SPO1 DNA polymerase-related protein [Nitrobacter winogradskyi Nb-255] gi|74421650|gb|ABA05849.1| phage SPO1 DNA polymerase-related protein [Nitrobacter winogradskyi Nb-255] Length = 301 Score = 225 bits (572), Expect = 7e-57, Method: Composition-based stats. Identities = 79/294 (26%), Positives = 123/294 (41%), Gaps = 38/294 (12%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPITNIRHI 59 MTS + ++L FY ++GV DEP + + I Sbjct: 1 MTSDHSTTVRELLA---FYLEAGVDCALGDEPVDRLSTPDLAPPDLAPPNIATPALAPGR 57 Query: 60 HSPLVQQADSIAQK---------------------------------ACSLHELKSLLRS 86 A IA A SL L++LL Sbjct: 58 PIAAKTGAAPIAATRQPSRQTATAPPRAGIAPPPDVAAEHAREAARTAPSLEALRALLEG 117 Query: 87 FHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM 146 F C L T+ + A LM +G P ++I G PF G++G +L++M+ +I + Sbjct: 118 FEGCALKFTASRLVFADGNPQARLMFVGEAPGRDEDIEGLPFVGRSGQLLNRMIAAIGLK 177 Query: 147 RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206 R ++I+ + PW PPGNR + E +IC P I RQIEL++P +L+ +GN + Sbjct: 178 RGDVYIANVIPWRPPGNRTPTPQETQICLPFIRRQIELVNPDVLVTLGNPSTQTLLQTRE 237 Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 + G+W + T I +AT HP L++ P K+ WH L + KAL++ Sbjct: 238 GIM-KTRGRWFDYDTGARTIRAMATFHPAYLLRSPSYKRMAWHDLRAIAKALED 290 >gi|163759107|ref|ZP_02166193.1| phage SPO1 DNA polymerase-related protein [Hoeflea phototrophica DFL-43] gi|162283511|gb|EDQ33796.1| phage SPO1 DNA polymerase-related protein [Hoeflea phototrophica DFL-43] Length = 313 Score = 225 bits (572), Expect = 7e-57, Method: Composition-based stats. Identities = 75/307 (24%), Positives = 133/307 (43%), Gaps = 50/307 (16%) Query: 4 KRILSQEQILTIALFYADSGVYWVFDE--------------------------PNNEATY 37 + + + + FYA+SGV V +E P + Sbjct: 5 ASDIPPQALAALLGFYAESGVDGVCEEVAIDRFAQSAEMAQSRKQNASRNTQAPVTAGAF 64 Query: 38 ESQRKEKSIDSAIQPIT-----------------------NIRHIHSPLVQQADSIAQKA 74 Q + S +P + + + A ++A+ A Sbjct: 65 GEQSRSASDGPGSRPSPAMAAQRAPAASGASAGTTPAQASQLTVPGEAVFKDARALAESA 124 Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 ++ EL++ L F C+L ++ S + A ++M IG P +++ G PF G+ G Sbjct: 125 STIDELRAALEGFGGCNLRHSAKSLVFADGNPEAEVMFIGEAPGREEDLQGTPFVGRAGQ 184 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 +LD+ML +I + R +I+ + PW PPGNR + E+E+CRP I R + L +PKI++ +G Sbjct: 185 LLDRMLAAIGLNRQTAYITNMIPWRPPGNRTPAPHEIELCRPFIERHVTLAAPKIVVMLG 244 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 N N D G W + + IP + T+HP L++ P K+ W L++L Sbjct: 245 NVATKSLLNTDKGILS-LRGDWMEYTSGTTSIPAMPTLHPAYLLRNPAQKRLVWADLLSL 303 Query: 255 KKALKNL 261 ++ L+++ Sbjct: 304 QQRLEDM 310 >gi|58616770|ref|YP_195969.1| hypothetical protein ERGA_CDS_00430 [Ehrlichia ruminantium str. Gardel] gi|58416382|emb|CAI27495.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel] Length = 263 Score = 225 bits (572), Expect = 8e-57, Method: Composition-based stats. Identities = 63/265 (23%), Positives = 124/265 (46%), Gaps = 12/265 (4%) Query: 7 LSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQ 66 +S +L F+ ++GV + + N+ + +Q ++ + S L + Sbjct: 1 MSDSDLLEALKFFYENGVDCILETE-NQVSISNQDTYLNLKGGNNDVEEYNMERSSLKED 59 Query: 67 ADS--------IAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPS 118 A++ A++ +L EL+S + F C + + + +T+ + +M+IG P Sbjct: 60 AEAYYLLKAQSAAEQCSTLEELRSAIEYFDGCDIKNLATNTVFSDGNPNAKMMLIGEAPG 119 Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPII 178 +++I G PF G +G +L+KML++I R ++IS W PPGNR ++ E+ +CRP + Sbjct: 120 ANEDIHGIPFCGNSGMLLNKMLEAIGFNRNTVYISNSVFWRPPGNRRPTDFEIAVCRPFV 179 Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATVHPQE 236 + I L+ PK+L+ +G+ ++ + G++ I T HP Sbjct: 180 EKHIALVMPKMLVLVGSTACYAILDSK-NPISKLRGRFHMYNNRFLQHSITTGIIFHPSY 238 Query: 237 LIQYPLIKKNTWHALITLKKALKNL 261 L++ P+ K+ W L ++ L Sbjct: 239 LLRQPMQKRIAWEDLKQIRDCFNTL 263 >gi|288962809|ref|YP_003453103.1| DNA polymerase bacteriophage-type [Azospirillum sp. B510] gi|288915075|dbj|BAI76559.1| DNA polymerase bacteriophage-type [Azospirillum sp. B510] Length = 285 Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats. Identities = 74/283 (26%), Positives = 132/283 (46%), Gaps = 28/283 (9%) Query: 6 ILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQ------------- 51 ++ IL ++ D G DEP + A S+ ++ + Sbjct: 1 MIDVCDILDALRWHTDIGCDEAIGDEPTDWAALASRPATRAPSPGVAPAAGAAIARAPAA 60 Query: 52 -------------PITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLS 98 + S QA + A +A +L L++ LRSF C L +T+++ Sbjct: 61 TRPPASARPAAPFASPDQPLGASEAGIQARARAGEAGTLEALEAALRSFDGCPLKATAMN 120 Query: 99 TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158 T+ A +M+IG P + ++ GKPF G +G +LD+ML I + R ++IS I PW Sbjct: 121 TVFADGNPQAPVMLIGEAPGEDEDRQGKPFVGVSGKLLDRMLAQIGLDRGTVYISNILPW 180 Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218 PPGNR+ + E+ C P + R +EL+ PK+L+ +G + N A+ + G+W + Sbjct: 181 RPPGNRSPTQAEVAACLPFLERHVELVRPKLLVALGGVSAKTLLN-RAEGITRLRGQWRS 239 Query: 219 LCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + IP + +HP L++ P+ K+ W ++ L++ + + Sbjct: 240 YEAAGTPIPLMPMLHPAYLLRNPIAKREAWRDMLALRQKIDEV 282 >gi|304393614|ref|ZP_07375542.1| DNA polymerase [Ahrensia sp. R2A130] gi|303294621|gb|EFL88993.1| DNA polymerase [Ahrensia sp. R2A130] Length = 293 Score = 224 bits (571), Expect = 9e-57, Method: Composition-based stats. Identities = 77/282 (27%), Positives = 123/282 (43%), Gaps = 37/282 (13%) Query: 14 TIALFYADSGVYWVF-DEPNNE------------------ATYESQRKEKSIDSAIQPIT 54 + +YA++GV DEP + T E Q ++ + + Sbjct: 9 ELLEWYAEAGVDIALADEPVDRFAEAAQAFEAVKNKKAVSKTDERQTQQAPVADQQSNLR 68 Query: 55 NIRHIHS-----------------PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL 97 + + V+QA +A KA +L EL+ +R F C+L + Sbjct: 69 DQSRTKAATPPPAAAPARPTIPDGAAVEQAKQLASKATTLDELRDAIRGFEGCNLRYQAK 128 Query: 98 STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP 157 + A +M+IG P ++ G PF GK+G +LD+ML +I + R ++IS + P Sbjct: 129 QMVFADGNPEASVMLIGEAPGRDEDAQGLPFVGKSGQLLDRMLAAIGLDRKSVYISNVIP 188 Query: 158 WHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS 217 W P GNR + E+EICRP I R IEL +PK+L+ +G + G+W Sbjct: 189 WRPAGNRTPTPAEIEICRPFIERHIELAAPKLLVLVGGSSAKAML-RTTDGITSVRGRWK 247 Query: 218 NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 ++ P L HP L++ P K+ W L+ LK L+ Sbjct: 248 DVKIGEREWPALPMFHPAYLLRNPAQKRRAWQDLLMLKARLE 289 >gi|42520066|ref|NP_965981.1| phage SPO1 DNA polymerase-related protein [Wolbachia endosymbiont of Drosophila melanogaster] gi|42409803|gb|AAS13915.1| phage SPO1 DNA polymerase-related protein [Wolbachia endosymbiont of Drosophila melanogaster] Length = 273 Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 69/268 (25%), Positives = 125/268 (46%), Gaps = 16/268 (5%) Query: 7 LSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH------ 60 +S + + + FY + GV E E ES+ + Sbjct: 1 MSNKDL-ELLKFYHEVGVDCTLTEGEEEKKLESKESVQPSVIQTGTKKKDADTRWGDTKD 59 Query: 61 ------SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIG 114 S + +A +A K S+ EL+S + SF C + T+ +T+ + +M++G Sbjct: 60 GKDMFPSDWIIEARKLASKCNSVDELRSAVESFEGCEIKKTATNTVFSDGNPNAKVMLVG 119 Query: 115 YTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC 174 P ++++ G PF G +G +LDKML +I + RT+++IS W PPGNR +++E+++C Sbjct: 120 EAPGANEDLQGIPFCGASGMLLDKMLNAINLDRTKVYISNTVFWRPPGNRKPTDLELDMC 179 Query: 175 RPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATV 232 RP + + + L SP+IL+ +G ++ G++ + + I T A Sbjct: 180 RPFVEKHVALASPQILILVGGIACYSLLDSTK-TISNLRGRFHTYTNQYLSNSITTAAIF 238 Query: 233 HPQELIQYPLIKKNTWHALITLKKALKN 260 HP L++ P K+ W L +++ L N Sbjct: 239 HPAYLLRQPAQKRLAWEDLKKIREYLDN 266 >gi|99034822|ref|ZP_01314738.1| hypothetical protein Wendoof_01000436 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 273 Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 69/268 (25%), Positives = 126/268 (47%), Gaps = 16/268 (5%) Query: 7 LSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH------ 60 +S + + + FY + GV E E ES+ + Sbjct: 1 MSNKDL-ELLKFYHEVGVDCTLTEGEEEKKLESKESVQPSVIQTGTKKKDADTRWGDTKD 59 Query: 61 ------SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIG 114 S + +A +A K S+ EL+S + SF C + T+ +T+ + +M++G Sbjct: 60 GKDMFPSDWIIEARKLASKCNSVDELRSAVESFEGCEIKKTATNTVFSDGNPNAKVMLVG 119 Query: 115 YTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC 174 P ++++ G PF G +G +LDKML +I + RT+++IS W PPGNR +++E+++C Sbjct: 120 EAPGANEDLQGIPFCGASGMLLDKMLNAINLDRTKVYISNTVFWRPPGNRKPTDLELDMC 179 Query: 175 RPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATV 232 RP + + + L+SP+IL+ +G ++ G++ + + I T A Sbjct: 180 RPFVEKHVALVSPQILILVGGIACYSLLDSTK-TISNLRGRFHTYTNQYLSNSITTAAIF 238 Query: 233 HPQELIQYPLIKKNTWHALITLKKALKN 260 HP L++ P K+ W L +++ L N Sbjct: 239 HPAYLLRQPAQKRLAWEDLKKIREYLDN 266 >gi|57238783|ref|YP_179919.1| hypothetical protein Erum0530 [Ehrlichia ruminantium str. Welgevonden] gi|58578708|ref|YP_196920.1| hypothetical protein ERWE_CDS_00440 [Ehrlichia ruminantium str. Welgevonden] gi|57160862|emb|CAH57764.1| putative uracil DNA glycosylase [Ehrlichia ruminantium str. Welgevonden] gi|58417334|emb|CAI26538.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Welgevonden] Length = 263 Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 63/265 (23%), Positives = 124/265 (46%), Gaps = 12/265 (4%) Query: 7 LSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQ 66 +S +L F+ ++GV + + N+ + +Q ++ + S L + Sbjct: 1 MSDSDLLEALKFFYENGVDCILETE-NQVSISNQDTYLNLKGGNNDVEEYNMERSSLKED 59 Query: 67 ADS--------IAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPS 118 A++ A++ +L EL+S + F C + + + +T+ + +M+IG P Sbjct: 60 AEAYYLLKAQSAAEQCSTLEELRSAIEYFDGCDIKNLATNTVFSDGNPNAKMMLIGEAPG 119 Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPII 178 +++I G PF G +G +L+KML++I R ++IS W PPGNR ++ E+ +CRP + Sbjct: 120 ANEDIHGIPFCGTSGMLLNKMLEAIGFNRNTVYISNSVFWRPPGNRRPTDFEIAVCRPFV 179 Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATVHPQE 236 + I L+ PK+L+ +G+ ++ + G++ I T HP Sbjct: 180 EKHIALVMPKMLVLVGSTACYAILDSK-NPISKLRGRFHMYNNRFLQHSITTGIIFHPSY 238 Query: 237 LIQYPLIKKNTWHALITLKKALKNL 261 L++ P+ K+ W L ++ L Sbjct: 239 LLRQPMQKRIAWEDLKQIRDCFNTL 263 >gi|39934111|ref|NP_946387.1| phage SPO1 DNA polymerase-like protein [Rhodopseudomonas palustris CGA009] gi|39647959|emb|CAE26479.1| possible phage DNA polymerases [Rhodopseudomonas palustris CGA009] Length = 276 Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 76/269 (28%), Positives = 120/269 (44%), Gaps = 21/269 (7%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQR--------------KEKS 45 MT S Q+L FY D+GV ++P N ++ K Sbjct: 1 MTPDPAPSLRQLLA---FYLDAGVDCALAEDPINRMLDDAPEPAAREAAPEPRPIVKPAL 57 Query: 46 IDSAIQPITNIRHIHSP--LVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICAT 103 P+ SP + A A A +L L+ L++ F C L +T+ + A Sbjct: 58 HAKPPPPLAFGAPPASPDAAIISAREAAATAPTLEALRELMQRFDGCALRATATQLVFAD 117 Query: 104 QTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGN 163 ++ +G P ++I G PF G++G +LD ML +I + R ++I+ + PW PPGN Sbjct: 118 GNPQAKVVFVGEAPGRDEDIEGLPFVGRSGKLLDLMLAAIGLNRGNVYIANVIPWRPPGN 177 Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH 223 R + E +IC P I RQIEL++P +L+ +GN + + G+W + T Sbjct: 178 RTPTPQETQICLPFIRRQIELVNPDLLVTLGNPSTQALLGTRDGIM-RTRGRWFDYDTGT 236 Query: 224 SIIPTLATVHPQELIQYPLIKKNTWHALI 252 I L T+HP L++ P K+ W L Sbjct: 237 RTIRALPTLHPAYLLRQPTYKRLAWQDLR 265 >gi|148253838|ref|YP_001238423.1| putative DNA polymerase [Bradyrhizobium sp. BTAi1] gi|146406011|gb|ABQ34517.1| putative DNA polymerase [Bradyrhizobium sp. BTAi1] Length = 274 Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 123/276 (44%), Gaps = 21/276 (7%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRK----------------E 43 M + + Q+L FY ++GV DEP N Sbjct: 2 MIPEPLPDVRQLLA---FYLETGVDCALADEPINRLVEPEAAPAPAAAVARPAAASPAGR 58 Query: 44 KSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICAT 103 + I P + A A A +L L+ LL +F C L T+ + A Sbjct: 59 LPAPAIIPPRGEPPPPPEAAIASAREAALTAPTLEALRELLENFDGCALKQTATRLVFAD 118 Query: 104 QTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGN 163 +M++G P ++I G PF G++G +LD+M+ +I + R++++I+ + PW PPGN Sbjct: 119 GNPQARIMLVGEAPGRDEDIEGLPFVGRSGKLLDRMIGAIGLDRSKVYIANVIPWRPPGN 178 Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH 223 R + E +IC P I RQIEL+ P +L+ +GN + ++ GKW + T Sbjct: 179 RTPTPQETQICLPFIRRQIELVDPDVLVTLGNPSTQAILGTTEGIM-RSRGKWRDYDTGK 237 Query: 224 SIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 I +AT HP L++ P K+ +W L + K + Sbjct: 238 RTIRAIATFHPAYLLRSPSYKRLSWQDLRAIAKVMA 273 >gi|163732348|ref|ZP_02139794.1| uracil-DNA glycosylase, C-terminal [Roseobacter litoralis Och 149] gi|161394646|gb|EDQ18969.1| uracil-DNA glycosylase, C-terminal [Roseobacter litoralis Och 149] Length = 261 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 66/267 (24%), Positives = 121/267 (45%), Gaps = 14/267 (5%) Query: 1 MTSKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYE--SQRKEKSIDSAIQPITNIR 57 M + L + + + G + + P N ++ ++K + + P Sbjct: 1 MAMESS-DFHHALALLDWQIELGATEAIGETPVNRYELPDKAKVQKKPGSAVMTPGAATV 59 Query: 58 HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117 V+ A A A L +L++ L +F C L + + + + G +MIIG P Sbjct: 60 AEKIDGVEAARKAALGAQDLEQLRAALAAFDHCDLKRGARNLVFSDGVAGAKVMIIGEAP 119 Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQ----IHISMISPWHPPGNRNLSNIEMEI 173 +++ G+PF G+ G +LD+ML +I++ R ++I+ + PW PP NR+ S+ E+ + Sbjct: 120 GREEDMQGRPFVGRAGQLLDRMLAAIDMGREHQSDPVYITNVLPWRPPQNRDPSSEEIAM 179 Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 RP + R I L P++L+ +GN + + G W +P L H Sbjct: 180 MRPFVERHIALAKPQVLVIMGNISAQTLLGKRG--ITRLRGHWVEAF----GVPALPMFH 233 Query: 234 PQELIQYPLIKKNTWHALITLKKALKN 260 P L++ P K+ W L++L+ L+N Sbjct: 234 PAYLLRTPTAKREAWADLLSLQARLQN 260 >gi|254511671|ref|ZP_05123738.1| uracil-DNA glycosylase [Rhodobacteraceae bacterium KLH11] gi|221535382|gb|EEE38370.1| uracil-DNA glycosylase [Rhodobacteraceae bacterium KLH11] Length = 257 Score = 223 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 63/261 (24%), Positives = 114/261 (43%), Gaps = 9/261 (3%) Query: 3 SKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKS-IDSAIQPITNIRHIH 60 + L + + + G + D P + + + + I + Sbjct: 1 MESALDPHTARALLEWQIELGATDAIGDAPIDRYALPDKAPKAPKAKTVATAIPSKTPEP 60 Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120 A +A+ A SL L++ + +F C L + + A T G +MIIG P Sbjct: 61 VDAAAIAQQVAKSAGSLPALQAAMDAFEHCDLKRGARQLVFADGTPGARVMIIGEAPGRD 120 Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIM 179 ++ GKPF G+ G +LD+ML +I++ R Q +I+ + PW PP NR+ E+ + +P + Sbjct: 121 EDREGKPFVGRAGQLLDRMLAAIDLDRKQNVYITNVLPWRPPQNRDPKPEEIGMMKPFLE 180 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 R + L P++L+ +GN + + G+W +P + HP L++ Sbjct: 181 RHVALAQPEVLVVMGNISCQAVLGKRG--ITRLRGRW----DQALNLPVIPMFHPAYLLR 234 Query: 240 YPLIKKNTWHALITLKKALKN 260 P +K+ W L+ LK L+ Sbjct: 235 QPQMKRQAWADLLELKSRLEA 255 >gi|225677066|ref|ZP_03788071.1| uracil-DNA glycosylase-like protein [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590888|gb|EEH12110.1| uracil-DNA glycosylase-like protein [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 273 Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 70/268 (26%), Positives = 133/268 (49%), Gaps = 16/268 (5%) Query: 7 LSQEQILTIALFYADSGVYWVFDEPNNEATYESQ---RKEKSIDSAIQPITNIR------ 57 +S + + + FY + GV E E ES+ + + ++R Sbjct: 1 MSNKDL-ELLKFYHEVGVDCTLMEGEEEKKLESKESVQPSVIQTGTKKKDADMRWDDTKD 59 Query: 58 ---HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIG 114 S + +A +A K S+ EL+S+++SF C + T+ +T+ + +M++G Sbjct: 60 GKDMFPSDWIIEARKLASKCNSVDELRSVVKSFEGCEIKKTATNTVFSDGNPNAKVMLVG 119 Query: 115 YTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC 174 P ++++ G PF G +G +LDKML +I + RT+++IS W PPGNR +++E+++C Sbjct: 120 EAPGANEDLQGIPFCGASGMLLDKMLNAINLDRTKVYISNTVFWRPPGNRKPTDLELDMC 179 Query: 175 RPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATV 232 RP + + + L+SP+IL+ +G ++ + G++ + + I T A Sbjct: 180 RPFVEKHVALVSPQILILVGGIACYSLLDST-ETISNLRGRFHTYTNQYLSNSITTAAIF 238 Query: 233 HPQELIQYPLIKKNTWHALITLKKALKN 260 HP L++ P K+ W L +++ L N Sbjct: 239 HPAYLLRQPAQKRLAWEDLKKIREYLDN 266 >gi|220925901|ref|YP_002501203.1| phage SPO1 DNA polymerase-like protein [Methylobacterium nodulans ORS 2060] gi|219950508|gb|ACL60900.1| phage SPO1 DNA polymerase-related protein [Methylobacterium nodulans ORS 2060] Length = 278 Score = 222 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 76/277 (27%), Positives = 121/277 (43%), Gaps = 19/277 (6%) Query: 2 TSKRILSQEQILTIALFYADSGVYWVFDE-PNNEATYESQRKEKSIDSAIQPITN----- 55 + + +L F+ SGV V DE P++ + +A+ P+ Sbjct: 1 MTDDAPDRSDLLAYLDFHVASGVDAVLDEVPHDRFAESEAKAAARPAAALPPVPPPAPAP 60 Query: 56 ------------IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICAT 103 A +A+ A SL EL++LL F C L T+ + + A Sbjct: 61 RPPSRGSTFGRSAAAEPGEAADDARELARAAGSLAELEALLARFESCPLRFTAKNLVFAD 120 Query: 104 QTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGN 163 +M +G P ++ GKPF G++G +LD+M+ +I + R+ ++ I PW PPGN Sbjct: 121 GEPSARVMFVGEAPGADEDRVGKPFMGRSGQLLDRMMAAIGLDRSNAYVGNIVPWRPPGN 180 Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH 223 R+ + E+ C+P I RQI L P IL+ +G ++ G+W T Sbjct: 181 RSPTPQEVATCKPFIERQIALADPDILVCLGGVATQTLAG-TRDGILKSRGRWFPYQTGR 239 Query: 224 SIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 I LAT+HP L++ PL K+ W L+ AL Sbjct: 240 REIRLLATLHPAYLLRQPLQKRLAWRDFRALRAALDA 276 >gi|163745656|ref|ZP_02153016.1| uracil-DNA glycosylase, C-terminal [Oceanibulbus indolifex HEL-45] gi|161382474|gb|EDQ06883.1| uracil-DNA glycosylase, C-terminal [Oceanibulbus indolifex HEL-45] Length = 254 Score = 222 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 71/255 (27%), Positives = 119/255 (46%), Gaps = 8/255 (3%) Query: 8 SQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQ 66 Q + + + G + D P N + + S A P V Sbjct: 5 DYHQAAEMLAWQVELGATEAICDAPVNRYEVPASPPKASAKIAKGPQPMQAAEKPDPVAL 64 Query: 67 ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126 A AQ A +L EL++ ++ F C L + + + + G LMI G +P ++ +GK Sbjct: 65 ARRAAQGAQTLDELRAAIQGFEACELHKGARNLVFSDGVPGAPLMIFGESPDRDEDRAGK 124 Query: 127 PFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELI 185 PF G+TG MLD+ML +I++ R + ++S I PW P R+ E+ + RP + R IEL Sbjct: 125 PFVGRTGQMLDRMLAAIDMGRDRNVYLSNILPWRTPQGRDPKPDEIAMMRPFVQRHIELA 184 Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK 245 PK+L+ GN + + + + G W T + +P + VHP L++ P K+ Sbjct: 185 KPKVLILFGNWSCQSLL--EKRSIMRLRGNW----TKAADLPCMPMVHPAYLLRNPEAKR 238 Query: 246 NTWHALITLKKALKN 260 W L++++ L+N Sbjct: 239 EAWADLLSVQAKLRN 253 >gi|163738869|ref|ZP_02146282.1| phage SPO1 DNA polymerase-related protein [Phaeobacter gallaeciensis BS107] gi|163741885|ref|ZP_02149275.1| uracil-DNA glycosylase [Phaeobacter gallaeciensis 2.10] gi|161385058|gb|EDQ09437.1| uracil-DNA glycosylase [Phaeobacter gallaeciensis 2.10] gi|161387674|gb|EDQ12030.1| phage SPO1 DNA polymerase-related protein [Phaeobacter gallaeciensis BS107] Length = 253 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 66/258 (25%), Positives = 110/258 (42%), Gaps = 10/258 (3%) Query: 3 SKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHS 61 + L + + + G + D P N +++ + +A R I Sbjct: 1 MESALDYHSAHALLAWQIELGATDAIGDAPVNRYELQARLPKPGAAAAEVAPAKPRDI-- 58 Query: 62 PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121 V+ A +A A SL L L F C L + + + A G +M++G P + Sbjct: 59 DPVEVARQMAGAAGSLEGLYEALGQFEHCELKKGARNLVFADGQPGARVMVVGEAPGRDE 118 Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMR 180 +I+GKPF G+ G +LD+ML +I + R +I+ + PW PP NR+ E+ + P + R Sbjct: 119 DIAGKPFVGRAGQLLDRMLAAIGLSRKDSVYIANVLPWRPPQNRDPLPAEIAMMTPFLER 178 Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 I L P IL+ +GN + + + G W P + HP L++ Sbjct: 179 HIALAKPDILIAMGNISCDALLGKRG--ITRMRGTWQEAQGK----PVMPMFHPAYLLRQ 232 Query: 241 PLIKKNTWHALITLKKAL 258 P K+ W L+ +K L Sbjct: 233 PAQKRAAWADLLEIKARL 250 >gi|83854882|ref|ZP_00948412.1| uracil-DNA glycosylase [Sulfitobacter sp. NAS-14.1] gi|83941405|ref|ZP_00953867.1| uracil-DNA glycosylase [Sulfitobacter sp. EE-36] gi|83842725|gb|EAP81892.1| uracil-DNA glycosylase [Sulfitobacter sp. NAS-14.1] gi|83847225|gb|EAP85100.1| uracil-DNA glycosylase [Sulfitobacter sp. EE-36] Length = 257 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 64/259 (24%), Positives = 116/259 (44%), Gaps = 11/259 (4%) Query: 5 RILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPL 63 + Q L + + + G + D P N + ++ + + Sbjct: 2 ESVDYHQALALLHWQIELGATEAICDAPVNRYEVPAAVEKPKAQKGKSGPVPLAAQGPDV 61 Query: 64 VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123 V +A A A +L EL++ + +F C L + + + T G +MI+G P ++ Sbjct: 62 VAEATQAAAGAATLDELRAAMAAFEHCELKRGARKMVFSDGTPGARVMIVGEAPGRDEDR 121 Query: 124 SGKPFSGKTGNMLDKMLQSIEIMRTQ----IHISMISPWHPPGNRNLSNIEMEICRPIIM 179 G+PF G+ G +LDKML +I++ R ++I+ + PW PP NR+ E+ + +P + Sbjct: 122 EGRPFVGRAGVLLDKMLAAIDMGRHHQTSPVYITNVLPWRPPQNRDPKPDEIAMMKPFLA 181 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 R I L P++L+ +GN + + G+W+ +P L HP L++ Sbjct: 182 RHIALAKPEVLVIVGNWSAQALLGKRG--ITRLRGQWTQAE----GLPALPMFHPAYLLR 235 Query: 240 YPLIKKNTWHALITLKKAL 258 P K+ W L++LK L Sbjct: 236 SPEFKREAWADLLSLKAKL 254 >gi|254504642|ref|ZP_05116793.1| uracil-DNA glycosylase, family 4, putative [Labrenzia alexandrii DFL-11] gi|222440713|gb|EEE47392.1| uracil-DNA glycosylase, family 4, putative [Labrenzia alexandrii DFL-11] Length = 300 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 74/297 (24%), Positives = 126/297 (42%), Gaps = 48/297 (16%) Query: 12 ILTIALFYADSGVYWVFDEPN--------------------------------------N 33 + + FY SGV E Sbjct: 4 LEALLDFYLASGVDASLGEDVVDWFQLSEVQAKARQQSATPQAAAQPVAAPGQNVSQQVR 63 Query: 34 EATYESQRKEKSIDSAIQPITNI---------RHIHSPLVQQADSIAQKACSLHELKSLL 84 + + ++Q + + P ++ A +A SL +L++ L Sbjct: 64 QVSPQNQSPSQPRPTQAAPAVGAGTRSPTDHGAIPDQAVISTARELASSTGSLADLRACL 123 Query: 85 RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIE 144 +F C+L T+ S + A +M+IG P +++ GKPF G++G +LD+ML +I Sbjct: 124 EAFDGCNLKRTAKSLVFADGNPDARVMLIGEAPGRDEDLQGKPFVGRSGQLLDRMLTAIG 183 Query: 145 IMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204 + R++++I+ PW PPGNR + E EICRP I RQIEL++P +++F+G + Sbjct: 184 LDRSRVYIANTVPWRPPGNRTPTPQETEICRPFIQRQIELVNPDVVVFLGAASAKTLLGV 243 Query: 205 DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + G+W + LAT HP L++ PL K+ +W +++K L L Sbjct: 244 Q-DGIRKMRGRWMTYPVAGRQVAALATYHPAYLLRSPLEKRLSWRDFLSVKSKLSEL 299 >gi|218682587|ref|ZP_03530188.1| phage SPO1 DNA polymerase-related protein [Rhizobium etli CIAT 894] Length = 299 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 94/295 (31%), Positives = 148/295 (50%), Gaps = 35/295 (11%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEP--NNEATYESQRKEKSIDSAIQPI----- 53 M S LS ++ + F+AD+GV W+ +E + A +E+ + + + QP Sbjct: 1 MISANDLSPAELAALLHFHADAGVEWLLEEEAVDRFAEFEAMKAARRPPTQAQPSVAGEG 60 Query: 54 ---------------------------TNIRHIHSPLVQQADSIAQKACSLHELKSLLRS 86 VQQA +A+ A SL ELK+ + + Sbjct: 61 TGSGQGRTTPRPNAAARPAPAAIAASGPQPAIPDGEAVQQARFVAETARSLAELKTAIEA 120 Query: 87 FHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM 146 F+ C+L ++ STI A+ +M+IG P D+ G PFSGK+G + DKML +I + Sbjct: 121 FNGCNLKHSARSTIFASGDADSGIMVIGSAPGAEDDREGVPFSGKSGQLFDKMLAAIGLT 180 Query: 147 RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206 R+ + ++ + PW PPGNR S EM+ICRP I RQI L PK +L +GN + FFF + Sbjct: 181 RSSVLLTQVIPWRPPGNRPPSAAEMDICRPFIERQIALAEPKAILLLGNFSARFFFGEND 240 Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 G+W + +IP +A++HPQ+L+ P+ K+ W+ L+ + LK+L Sbjct: 241 TIHG-LRGRWKEIAVADCVIPAIASLHPQDLLTAPVNKRLAWNDLLAFQAKLKSL 294 >gi|68171577|ref|ZP_00544951.1| Phage SPO1 DNA polymerase-related protein [Ehrlichia chaffeensis str. Sapulpa] gi|88657868|ref|YP_506904.1| uracil-DNA glycosylase [Ehrlichia chaffeensis str. Arkansas] gi|67999003|gb|EAM85680.1| Phage SPO1 DNA polymerase-related protein [Ehrlichia chaffeensis str. Sapulpa] gi|88599325|gb|ABD44794.1| uracil-DNA glycosylase, family 4 [Ehrlichia chaffeensis str. Arkansas] Length = 261 Score = 220 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 68/262 (25%), Positives = 128/262 (48%), Gaps = 8/262 (3%) Query: 7 LSQEQILTIALFYADSGVYWVFDEPN-NEATYESQRKEKSIDSAIQPITNIRHIHSPLVQ 65 +S +L + FY ++G+ ++ N T ++ + S D+ I Sbjct: 1 MSDLDLLEVLKFYHENGIDCTLEDVQYNVFTSKNLSLQNSSDTGYCMKEKQASIKENTED 60 Query: 66 ----QADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121 +A S+A++ ++ +LKS + SF C + + + +T+ A +M+IG P ++ Sbjct: 61 YYLLKAQSLAEQCNTIEQLKSAVESFDGCDIKNLATNTVFADGNPKARVMLIGEAPGANE 120 Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ 181 ++ G PF G +G +LDKMLQ+I RT ++IS W PPGNR ++ E+ +C+P + + Sbjct: 121 DLKGIPFCGASGMLLDKMLQAIGFDRTTVYISNAVFWRPPGNRRPTDFEIAVCKPFVEKH 180 Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATVHPQELIQ 239 I LI P++L+ +G+ ++ + G++ + I T HP L++ Sbjct: 181 IALIVPQMLVLVGSTACYAMLDSK-NPISRLRGRFHSYSNQFLQHSITTGIIFHPSYLLR 239 Query: 240 YPLIKKNTWHALITLKKALKNL 261 P+ K+ W L +K+ L Sbjct: 240 QPMQKRLAWEDLKQIKRYFDTL 261 >gi|259415078|ref|ZP_05739000.1| uracil-DNA glycosylase [Silicibacter sp. TrichCH4B] gi|259348988|gb|EEW60742.1| uracil-DNA glycosylase [Silicibacter sp. TrichCH4B] Length = 255 Score = 220 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 63/260 (24%), Positives = 115/260 (44%), Gaps = 9/260 (3%) Query: 3 SKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHS 61 + L + + + G + D P N + Q+ + A P ++ Sbjct: 1 MESELDYWSAKALLEWQVELGATEAMMDAPINRYELQDQKPKA-ARGAEAPPAPVKPKSV 59 Query: 62 PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121 V +A +A+ A +L L++ L +F C L + + + + G +MIIG P + Sbjct: 60 DPVAEAVKLAKSADALPGLRAALETFEHCDLKRGARNLVFSDGQAGARVMIIGEAPGRDE 119 Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMR 180 ++ GKPF G+ G +LDKML +I++ R + +I+ + PW PP NR+ E+ + P + R Sbjct: 120 DLQGKPFVGRAGQLLDKMLAAIDLSRDENVYITNVLPWRPPQNRDPLPAEIAMLVPFLER 179 Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 + L P +L+ +GN + + G W+ P + HP L++ Sbjct: 180 HVALAQPDVLVLMGNISCQAVLGKRG--ITRLRGNWAQAWGK----PVIPMFHPAYLLRQ 233 Query: 241 PLIKKNTWHALITLKKALKN 260 K+ W L+ L+ L + Sbjct: 234 ASAKRQAWADLLELRARLNS 253 >gi|91203817|emb|CAJ71470.1| conserved hypothetical protein [Candidatus Kuenenia stuttgartiensis] Length = 263 Score = 220 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 66/253 (26%), Positives = 113/253 (44%), Gaps = 8/253 (3%) Query: 10 EQILTIALFYADSGVYWV-FDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQAD 68 + + F GV + + NN + +K+ + PL + Sbjct: 15 KDLKARLAFEETFGVEVISINAQNNLVKSSTTITQKNDMPKTSAPQTESNDKKPLTTRPK 74 Query: 69 SIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128 KA L ELK+ H C L T + + LM +G P +++ G+PF Sbjct: 75 E--GKAKLLEELKNETLVCHKCPLGETRTNLVFGAGNPMASLMFVGEAPGRDEDLQGEPF 132 Query: 129 SGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188 G+ G +L K++++I++ R+ ++I+ I PPGNRN E+ +C P++ +QI++I PK Sbjct: 133 VGRAGQLLTKIIEAIDMKRSDVYIANILKCRPPGNRNPLTDEIALCIPVLTKQIDIIKPK 192 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW 248 +L +G N + GK+ + IPT+AT HP L++ P K W Sbjct: 193 VLCAMGTFAAQTLLNTK-EPIGFLRGKFHDY----KGIPTMATFHPAYLLRNPGEKAKVW 247 Query: 249 HALITLKKALKNL 261 + ++ LK L Sbjct: 248 EDMKKIRDLLKEL 260 >gi|99078039|ref|YP_611297.1| phage SPO1 DNA polymerase-related protein [Ruegeria sp. TM1040] gi|99035177|gb|ABF62035.1| phage SPO1 DNA polymerase-related protein [Ruegeria sp. TM1040] Length = 255 Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 69/261 (26%), Positives = 117/261 (44%), Gaps = 9/261 (3%) Query: 3 SKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHS 61 + L + + + G + D P + E Q+ K +A P T ++ Sbjct: 1 MESELDYWSAKALLEWQVELGATEAMMDTPIDRYGLEDQKP-KPARAADTPPTPVKPKTV 59 Query: 62 PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121 V +A +A+ A +L L++ L F C L + + + + G +MIIG P + Sbjct: 60 DPVAEAAKLAKTAQALPSLRAALEQFEHCDLKRGARNLVFSDGQAGARVMIIGEAPGRDE 119 Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMR 180 ++ GKPF G+ G +LDKML +IE+ R + +I+ + PW PP NR+ E+ + P + R Sbjct: 120 DLQGKPFVGRAGQLLDKMLDAIELSREKNVYITNVLPWRPPQNRDPLPAEISMLVPFLER 179 Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 + L P IL+ +GN + + G WS P + HP L++ Sbjct: 180 HVALAEPDILVLMGNISCQAVLGKRG--ITRLRGTWSEAWGK----PVIPMFHPAYLLRQ 233 Query: 241 PLIKKNTWHALITLKKALKNL 261 K+ W L+ L+ L +L Sbjct: 234 AHAKRQAWADLLELRARLNSL 254 >gi|83945346|ref|ZP_00957694.1| hypothetical protein OA2633_14206 [Oceanicaulis alexandrii HTCC2633] gi|83851180|gb|EAP89037.1| hypothetical protein OA2633_14206 [Oceanicaulis alexandrii HTCC2633] Length = 261 Score = 219 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 72/263 (27%), Positives = 120/263 (45%), Gaps = 4/263 (1%) Query: 1 MT-SKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHI 59 MT + ++ ++ SGV + P ++ + A Sbjct: 1 MTAPLNPEDIRALKSLISWWEQSGVEALPPLPAPKSARPAPPPSMEAR-ATGAQARQAGF 59 Query: 60 HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSD 119 + Q ++AQ A ++ ELK L +F C L +T+ T+ A D+M++G P Sbjct: 60 GAAPTQNGRAMAQAAQTVGELKQALDAFDGCPLKATATQTVYARGNPQADVMVVGEAPGR 119 Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIM 179 ++ G PF G+ G +LD+ML +I + T +I+ + W PPGNR ++ E+E C P Sbjct: 120 DEDREGAPFIGQAGQLLDRMLAAIGLNETSAYITNVVFWRPPGNRKPTDAEIEACLPFAE 179 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI-IPTLATVHPQELI 238 R IEL+ PK+++F G + ++ A G+W + IP L HP L+ Sbjct: 180 RHIELVRPKVIVFAGGISAQSLLHSKAGIMA-LRGRWHDYTLSDGTMIPALPMYHPAFLL 238 Query: 239 QYPLIKKNTWHALITLKKALKNL 261 + P K +W L++LK L L Sbjct: 239 RRPQEKAKSWQDLLSLKAKLAAL 261 >gi|328544965|ref|YP_004305074.1| Uracil-DNA glycosylase, family 4 [polymorphum gilvum SL003B-26A1] gi|326414707|gb|ADZ71770.1| Uracil-DNA glycosylase, family 4, putative [Polymorphum gilvum SL003B-26A1] Length = 300 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 77/288 (26%), Positives = 130/288 (45%), Gaps = 38/288 (13%) Query: 8 SQEQILTIALFYADSGVYWVFDE-PNNEATYESQRKEKSIDSAIQP-------------- 52 S + + F +GV + +E P + ++ + A +P Sbjct: 11 SLRDLEALLDFLQAAGVDGLLEEAPVDRFALPAEAEASRSAPAQRPEMRPDLRPAAPATP 70 Query: 53 ------ITNIRHIHSPL----------------VQQADSIAQKACSLHELKSLLRSFHDC 90 T + +PL V A A+ A +L L++ L +F C Sbjct: 71 GPGVTAPTRAAPVPAPLPGGGGYDGAVIPGEETVVSAREAARSAETLEALRACLAAFKGC 130 Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150 +L T+ + + +M++G P +++ G PF G++G +LD+ML++I + R+Q+ Sbjct: 131 NLHLTAKNLVFDDGNPQARVMLVGEAPGRDEDLQGLPFVGRSGQLLDRMLKAIGLDRSQV 190 Query: 151 HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210 +I+ + PW PPGNR + E EIC+P I RQIEL P IL+F+G + Sbjct: 191 YIANVVPWRPPGNRTPTPQETEICKPFIARQIELADPDILVFLGAASAKVLLGVQ-DGIR 249 Query: 211 QNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 + G+W T I +AT HP L++ PL K+ W + L++AL Sbjct: 250 KMRGRWMTYDTGRRQIRCIATFHPAYLLRSPLEKRLAWRDFLALRQAL 297 >gi|306842110|ref|ZP_07474780.1| uracil-DNA glycosylase, family 4 [Brucella sp. BO2] gi|306287783|gb|EFM59211.1| uracil-DNA glycosylase, family 4 [Brucella sp. BO2] Length = 290 Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats. Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 31/281 (11%) Query: 11 QILTIALFYADSGVYW-VFDEPNNEATY---ESQRKEKSIDSAIQPITNIRH-------- 58 I + FYA++GV + + P + + + + +A QP +N Sbjct: 9 DIEGLLRFYAEAGVDVPLCETPIDRFAAATHPAPAQSRMQAAAQQPESNPAQAREERART 68 Query: 59 -----------------IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTIC 101 + + A A +A +L EL+ L +F C+L T+ + Sbjct: 69 VAVPSPSSKPVQAAMDLPDNAQIALAREAASQAETLEELREKLAAFDGCNLKFTAKNLCF 128 Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 A D+M IG P +++ G PF GK+G +L++M+++I + R +++I+ PW PP Sbjct: 129 ADGDPSSDIMFIGEAPGRDEDMEGLPFVGKSGQLLNRMIEAIGLKREEVYIANTIPWRPP 188 Query: 162 GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221 GNR + +E E+CRP I RQIEL +PK+L+ +G A+ + G W T Sbjct: 189 GNRAPTPLETELCRPFIERQIELAAPKVLVALGGPAGKALTGA-AEGILRLRGNWKIHRT 247 Query: 222 P-HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 P IP + T+HP L++ P K+ W + +K L L Sbjct: 248 PTGMEIPVMPTLHPAYLLRTPAQKRFAWRDFLAVKLKLAEL 288 >gi|306845226|ref|ZP_07477802.1| uracil-DNA glycosylase, family 4 [Brucella sp. BO1] gi|306274385|gb|EFM56192.1| uracil-DNA glycosylase, family 4 [Brucella sp. BO1] Length = 290 Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats. Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 31/281 (11%) Query: 11 QILTIALFYADSGVYW-VFDEPNNEATY---ESQRKEKSIDSAIQPITNIRH-------- 58 I + FYA++GV + + P + + + + +A QP +N Sbjct: 9 DIEGLLRFYAEAGVDVPLCETPIDRFAAATHPAPAQSRMQAAAQQPESNPVQAREERART 68 Query: 59 -----------------IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTIC 101 + + A A +A +L EL+ L +F C+L T+ + Sbjct: 69 VAAPSPSSKPVQAAMDLPDNAQIALAREAASQAETLEELREKLAAFDGCNLKFTAKNLCF 128 Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 A D+M IG P +++ G PF GK+G +L++M+++I + R +++I+ PW PP Sbjct: 129 ADGDPSSDIMFIGEAPGRDEDMEGLPFVGKSGQLLNRMIEAIGLKREEVYIANTIPWRPP 188 Query: 162 GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221 GNR + +E E+CRP I RQIEL +PK+L+ +G A+ + G W T Sbjct: 189 GNRAPTPLETELCRPFIERQIELAAPKVLVALGGPAGKALTG-TAEGILRLRGNWKIHRT 247 Query: 222 P-HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 P IP + T+HP L++ P K+ W + +K L L Sbjct: 248 PTGMEIPVMPTLHPAYLLRTPAQKRFAWRDFLAVKLKLAEL 288 >gi|254718769|ref|ZP_05180580.1| uracil-DNA glycosylase, family 4 [Brucella sp. 83/13] gi|265983747|ref|ZP_06096482.1| conserved hypothetical protein [Brucella sp. 83/13] gi|306840191|ref|ZP_07472971.1| uracil-DNA glycosylase, family 4 [Brucella sp. NF 2653] gi|264662339|gb|EEZ32600.1| conserved hypothetical protein [Brucella sp. 83/13] gi|306404722|gb|EFM61021.1| uracil-DNA glycosylase, family 4 [Brucella sp. NF 2653] Length = 290 Score = 218 bits (555), Expect = 7e-55, Method: Composition-based stats. Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 31/281 (11%) Query: 11 QILTIALFYADSGVYW-VFDEPNNEATY---ESQRKEKSIDSAIQPITNIRH-------- 58 I + FYA++GV + + P + + + + +A QP +N Sbjct: 9 DIEGLLRFYAEAGVDVPLCETPIDRFAAATHPAPAQSRMQAAAQQPESNPAQAREERART 68 Query: 59 -----------------IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTIC 101 + + A A +A +L EL+ L +F C+L T+ + Sbjct: 69 VAVPSPSSKPVQAAMDLPDNAQIALAREAASQAETLEELREKLAAFDGCNLKFTAKNLCF 128 Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 A D+M IG P +++ G PF GK+G +L++M+++I + R +++I+ PW PP Sbjct: 129 ADGDPSSDIMFIGEAPGRDEDMEGLPFVGKSGQLLNRMIEAIGLKREEVYIANTIPWRPP 188 Query: 162 GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221 GNR + +E E+CRP I RQIEL +PK+L+ +G A+ + G W T Sbjct: 189 GNRAPTPLETELCRPFIERQIELAAPKVLVALGGPAGKALTGA-AEGILRLRGNWKIHRT 247 Query: 222 P-HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 P IP + T+HP L++ P K+ W + +K L L Sbjct: 248 PTGMEIPVMPTLHPAYLLRTPAQKRFAWRDFLAVKLKLAEL 288 >gi|239831462|ref|ZP_04679791.1| uracil-DNA glycosylase, family 4 [Ochrobactrum intermedium LMG 3301] gi|239823729|gb|EEQ95297.1| uracil-DNA glycosylase, family 4 [Ochrobactrum intermedium LMG 3301] Length = 284 Score = 218 bits (554), Expect = 9e-55, Method: Composition-based stats. Identities = 79/275 (28%), Positives = 121/275 (44%), Gaps = 25/275 (9%) Query: 11 QILTIALFYADSGVYWVFDE-PNNEATYESQRKEKSIDSAIQPITNIRHI---------- 59 I + FYA++GV E P + + Q Sbjct: 9 DIEGLLRFYAEAGVDMPLSETPIDRFAEPQRPAPAQPAMQTQSPPERPRQQPRPAPAPAP 68 Query: 60 HSPLVQQADSIAQKAC------------SLHELKSLLRSFHDCHLCSTSLSTICATQTEG 107 S VQ A + A +L EL+ L +F C+L T+ + A Sbjct: 69 TSRPVQAAADLPDTAQIALAREAAAQASTLDELREKLAAFDGCNLKFTAKNLCFADGDPS 128 Query: 108 QDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLS 167 D+M IG P +++ G PF GK+G +L++M++SI + R ++I+ PW PPGNR + Sbjct: 129 SDIMFIGEAPGRDEDMEGLPFVGKSGQLLNRMIESIGLKRESVYIANTIPWRPPGNRTPT 188 Query: 168 NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI-I 226 +E E+CRP I RQIEL +PK+L+ +G + + G W TP I I Sbjct: 189 PLETELCRPFIERQIELAAPKVLVALGGPAGKALTGAT-EGILRLRGNWKIHRTPSGIEI 247 Query: 227 PTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 P + T+HP L++ P K+ W + +K L L Sbjct: 248 PVMPTLHPAYLLRTPAQKRFAWRDFLAVKLKLAEL 282 >gi|256060754|ref|ZP_05450917.1| uracil-DNA glycosylase, family 4 [Brucella neotomae 5K33] gi|261324742|ref|ZP_05963939.1| conserved hypothetical protein [Brucella neotomae 5K33] gi|261300722|gb|EEY04219.1| conserved hypothetical protein [Brucella neotomae 5K33] Length = 290 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 77/281 (27%), Positives = 130/281 (46%), Gaps = 31/281 (11%) Query: 11 QILTIALFYADSGVYW-VFDEPNNEATY---ESQRKEKSIDSAIQPITNIRH-------- 58 + + FYA++GV + + P + + + + +A QP +N Sbjct: 9 DMEGLLRFYAEAGVDVPLCETPIDRFAAATHPAPAQSRMQAAAQQPESNPAQAREERART 68 Query: 59 -----------------IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTIC 101 + + A A +A +L EL+ L +F C+L T+ + Sbjct: 69 VAVPSPSSKPVQAAMVLPDNAQIALAREAASQAETLEELREKLAAFDGCNLKFTAKNLCF 128 Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 A D+M IG P +++ G PF GK+G +L++M+++I + R +++I+ PW PP Sbjct: 129 ADGDPSSDIMFIGEAPGRDEDMEGLPFVGKSGQLLNRMIEAIGLKREEVYIANTIPWRPP 188 Query: 162 GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221 GNR + +E E+CRP I RQIEL +PK+L+ +G A+ + G W T Sbjct: 189 GNRAPTPLETELCRPFIERQIELAAPKVLVALGGPAGKALTGA-AEGILRLRGNWKIHRT 247 Query: 222 P-HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 P IP + T+HP L++ P K+ W + +K L L Sbjct: 248 PTGMEIPVMPTLHPAYLLRTPAQKRFAWRDFLAVKLKLAEL 288 >gi|89056392|ref|YP_511843.1| phage SPO1 DNA polymerase-related protein [Jannaschia sp. CCS1] gi|88865941|gb|ABD56818.1| phage SPO1 DNA polymerase-related protein [Jannaschia sp. CCS1] Length = 300 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 63/267 (23%), Positives = 107/267 (40%), Gaps = 24/267 (8%) Query: 11 QILTIALFYADSGVY-WVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHS-------- 61 L + + G + D P + + A P+ R Sbjct: 40 DALAALEWQVELGADEAMLDAPLDRFDLPAPVAMPKAPPAAGPVGPSRAAAPVNSTRPAT 99 Query: 62 ----PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117 V A +A+ A SL L S + F C L + + + T +MI+G P Sbjct: 100 LPQVDAVAIARQLAEAAGSLEALSSAMEGFEHCELRRGARNFVFHDGTPDARVMIVGEAP 159 Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-----HISMISPWHPPGNRNLSNIEME 172 ++ GKPF G+ G +LD+M +I + R +I+ + PW PP NR+ E+ Sbjct: 160 GREEDSQGKPFVGRAGQLLDRMFAAIGLDRAVEGGEGLYITNMLPWRPPQNRDPKAEELA 219 Query: 173 ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATV 232 + P + R I+L+ P++L+ +GN + G W ++ PT+ Sbjct: 220 MMAPFVQRHIDLVDPEVLVLMGNHACAGLLGRRG--ITRMRGTWEDVN----GRPTMPMC 273 Query: 233 HPQELIQYPLIKKNTWHALITLKKALK 259 HP L++ P K+ W L+++K L Sbjct: 274 HPAYLLRNPAAKREAWADLLSIKARLA 300 >gi|158425118|ref|YP_001526410.1| phage SPO1 DNA polymerase-related protein [Azorhizobium caulinodans ORS 571] gi|158332007|dbj|BAF89492.1| phage SPO1 DNA polymerase-related protein [Azorhizobium caulinodans ORS 571] Length = 297 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 78/296 (26%), Positives = 126/296 (42%), Gaps = 41/296 (13%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPITNIRHI 59 MTS + E FYA++GV DEP + + K + P T Sbjct: 1 MTS---FAYEHFRDALAFYAEAGVDVAIGDEPVDRFAESAAEKARRGVGRSAPQTASAQP 57 Query: 60 HSP------------------------------------LVQQADSIAQKACSLHELKSL 83 + V A A A SL EL+++ Sbjct: 58 VNDSPAASPAPVRAPAAPRAPAPAAAGPGPMAAAQAPDQAVMAAREAAHTAASLDELRAM 117 Query: 84 LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143 L +F C L T+ + A +M +G P +++ G PF G++G +LD ML +I Sbjct: 118 LEAFEGCPLKRTATRLVFADGNPAAKVMFVGEAPGRDEDVQGLPFVGRSGRLLDLMLGAI 177 Query: 144 EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 + RT+ +I+ + PW PPGNR + E IC P I RQ+EL +P +L+ +G + + Sbjct: 178 GLDRTKAYIANVIPWRPPGNRTPTPQETAICLPFIRRQVELANPDVLVCLGGPSAQALLS 237 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 + + G++ + T I +AT HP L++ PL K+ W ++ ++ AL Sbjct: 238 -TTEGITKLRGRFMSYDTGSRTIKAIATFHPAYLLRTPLGKRLAWRDMLAVEAALN 292 >gi|17987604|ref|NP_540238.1| DNA polymerase [Brucella melitensis bv. 1 str. 16M] gi|23501507|ref|NP_697634.1| phage SPO1 DNA polymerase-like protein [Brucella suis 1330] gi|62289582|ref|YP_221375.1| phage SPO1 DNA polymerase-like protein [Brucella abortus bv. 1 str. 9-941] gi|82699512|ref|YP_414086.1| uracil-DNA glycosylase [Brucella melitensis biovar Abortus 2308] gi|148560496|ref|YP_001258613.1| phage SPO1 DNA polymerase-like protein [Brucella ovis ATCC 25840] gi|161618595|ref|YP_001592482.1| uracil-DNA glycosylase [Brucella canis ATCC 23365] gi|163842895|ref|YP_001627299.1| uracil-DNA glycosylase [Brucella suis ATCC 23445] gi|189023841|ref|YP_001934609.1| DNA polymerase, bacteriophage-type [Brucella abortus S19] gi|225627127|ref|ZP_03785165.1| uracil-DNA glycosylase, family 4 [Brucella ceti str. Cudo] gi|225852145|ref|YP_002732378.1| uracil-DNA glycosylase [Brucella melitensis ATCC 23457] gi|237815079|ref|ZP_04594077.1| uracil-DNA glycosylase, family 4 [Brucella abortus str. 2308 A] gi|254688903|ref|ZP_05152157.1| uracil-DNA glycosylase, family 4 [Brucella abortus bv. 6 str. 870] gi|254693384|ref|ZP_05155212.1| uracil-DNA glycosylase, family 4 [Brucella abortus bv. 3 str. Tulya] gi|254697035|ref|ZP_05158863.1| uracil-DNA glycosylase, family 4 [Brucella abortus bv. 2 str. 86/8/59] gi|254701414|ref|ZP_05163242.1| uracil-DNA glycosylase, family 4 [Brucella suis bv. 5 str. 513] gi|254703959|ref|ZP_05165787.1| uracil-DNA glycosylase, family 4 [Brucella suis bv. 3 str. 686] gi|254707663|ref|ZP_05169491.1| uracil-DNA glycosylase, family 4 [Brucella pinnipedialis M163/99/10] gi|254709754|ref|ZP_05171565.1| uracil-DNA glycosylase, family 4 [Brucella pinnipedialis B2/94] gi|254713757|ref|ZP_05175568.1| uracil-DNA glycosylase, family 4 [Brucella ceti M644/93/1] gi|254717185|ref|ZP_05178996.1| uracil-DNA glycosylase, family 4 [Brucella ceti M13/05/1] gi|254729934|ref|ZP_05188512.1| uracil-DNA glycosylase, family 4 [Brucella abortus bv. 4 str. 292] gi|256031244|ref|ZP_05444858.1| uracil-DNA glycosylase, family 4 [Brucella pinnipedialis M292/94/1] gi|256044322|ref|ZP_05447226.1| uracil-DNA glycosylase, family 4 [Brucella melitensis bv. 1 str. Rev.1] gi|256159355|ref|ZP_05457138.1| uracil-DNA glycosylase, family 4 [Brucella ceti M490/95/1] gi|256254652|ref|ZP_05460188.1| uracil-DNA glycosylase, family 4 [Brucella ceti B1/94] gi|256257151|ref|ZP_05462687.1| uracil-DNA glycosylase, family 4 [Brucella abortus bv. 9 str. C68] gi|256264343|ref|ZP_05466875.1| DNA polymerase [Brucella melitensis bv. 2 str. 63/9] gi|256369059|ref|YP_003106567.1| phage SPO1 DNA polymerase-related protein [Brucella microti CCM 4915] gi|260168380|ref|ZP_05755191.1| phage SPO1 DNA polymerase-related protein [Brucella sp. F5/99] gi|260545657|ref|ZP_05821398.1| DNA polymerase [Brucella abortus NCTC 8038] gi|260563676|ref|ZP_05834162.1| DNA polymerase [Brucella melitensis bv. 1 str. 16M] gi|260566792|ref|ZP_05837262.1| DNA polymerase [Brucella suis bv. 4 str. 40] gi|260754388|ref|ZP_05866736.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260757607|ref|ZP_05869955.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260761433|ref|ZP_05873776.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260883413|ref|ZP_05895027.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|261213634|ref|ZP_05927915.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] gi|261219001|ref|ZP_05933282.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261221827|ref|ZP_05936108.1| conserved hypothetical protein [Brucella ceti B1/94] gi|261315159|ref|ZP_05954356.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261317285|ref|ZP_05956482.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261321499|ref|ZP_05960696.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|261751953|ref|ZP_05995662.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] gi|261754611|ref|ZP_05998320.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] gi|261757840|ref|ZP_06001549.1| DNA polymerase [Brucella sp. F5/99] gi|265988323|ref|ZP_06100880.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] gi|265990734|ref|ZP_06103291.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] gi|265997792|ref|ZP_06110349.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|294851989|ref|ZP_06792662.1| uracil-DNA glycosylase [Brucella sp. NVSL 07-0026] gi|297247997|ref|ZP_06931715.1| DNA polymerase bacteriophage-type [Brucella abortus bv. 5 str. B3196] gi|17983312|gb|AAL52502.1| DNA polymerase, bacteriophage-type [Brucella melitensis bv. 1 str. 16M] gi|23347415|gb|AAN29549.1| phage SPO1 DNA polymerase-related protein [Brucella suis 1330] gi|62195714|gb|AAX74014.1| phage SPO1 DNA polymerase-related protein [Brucella abortus bv. 1 str. 9-941] gi|82615613|emb|CAJ10600.1| ATP/GTP-binding site motif A (P-loop):Uracil-DNA glycosylase superfamily:Phage SPO1 DNA polymerase-related protein [Brucella melitensis biovar Abortus 2308] gi|148371753|gb|ABQ61732.1| phage SPO1 DNA polymerase-related protein [Brucella ovis ATCC 25840] gi|161335406|gb|ABX61711.1| uracil-DNA glycosylase, family 4 [Brucella canis ATCC 23365] gi|163673618|gb|ABY37729.1| uracil-DNA glycosylase, family 4 [Brucella suis ATCC 23445] gi|189019413|gb|ACD72135.1| DNA polymerase, bacteriophage-type [Brucella abortus S19] gi|225617962|gb|EEH15006.1| uracil-DNA glycosylase, family 4 [Brucella ceti str. Cudo] gi|225640510|gb|ACO00424.1| uracil-DNA glycosylase, family 4 [Brucella melitensis ATCC 23457] gi|237789916|gb|EEP64126.1| uracil-DNA glycosylase, family 4 [Brucella abortus str. 2308 A] gi|255999219|gb|ACU47618.1| phage SPO1 DNA polymerase-related protein [Brucella microti CCM 4915] gi|260097064|gb|EEW80939.1| DNA polymerase [Brucella abortus NCTC 8038] gi|260153692|gb|EEW88784.1| DNA polymerase [Brucella melitensis bv. 1 str. 16M] gi|260156310|gb|EEW91390.1| DNA polymerase [Brucella suis bv. 4 str. 40] gi|260667925|gb|EEX54865.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260671865|gb|EEX58686.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260674496|gb|EEX61317.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260872941|gb|EEX80010.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|260915241|gb|EEX82102.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] gi|260920411|gb|EEX87064.1| conserved hypothetical protein [Brucella ceti B1/94] gi|260924090|gb|EEX90658.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261294189|gb|EEX97685.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|261296508|gb|EEY00005.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261304185|gb|EEY07682.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261737824|gb|EEY25820.1| DNA polymerase [Brucella sp. F5/99] gi|261741706|gb|EEY29632.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] gi|261744364|gb|EEY32290.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] gi|262552260|gb|EEZ08250.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|263001518|gb|EEZ14093.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] gi|263094617|gb|EEZ18415.1| DNA polymerase [Brucella melitensis bv. 2 str. 63/9] gi|264660520|gb|EEZ30781.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] gi|294820578|gb|EFG37577.1| uracil-DNA glycosylase [Brucella sp. NVSL 07-0026] gi|297175166|gb|EFH34513.1| DNA polymerase bacteriophage-type [Brucella abortus bv. 5 str. B3196] gi|326408646|gb|ADZ65711.1| DNA polymerase, bacteriophage-type [Brucella melitensis M28] gi|326538367|gb|ADZ86582.1| uracil-DNA glycosylase, family 4 [Brucella melitensis M5-90] Length = 290 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 77/281 (27%), Positives = 130/281 (46%), Gaps = 31/281 (11%) Query: 11 QILTIALFYADSGVYW-VFDEPNNEATY---ESQRKEKSIDSAIQPITNIRH-------- 58 + + FYA++GV + + P + + + + +A QP +N Sbjct: 9 DMEGLLRFYAEAGVDVPLCETPIDRFAAATHPAPAQSRMQAAAQQPESNPAQAREERART 68 Query: 59 -----------------IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTIC 101 + + A A +A +L EL+ L +F C+L T+ + Sbjct: 69 VAVPSPSSKPVQAAMDLPDNAQIALAREAASQAETLEELREKLAAFDGCNLKFTAKNLCF 128 Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 A D+M IG P +++ G PF GK+G +L++M+++I + R +++I+ PW PP Sbjct: 129 ADGDPSSDIMFIGEAPGRDEDMEGLPFVGKSGQLLNRMIEAIGLKREEVYIANTIPWRPP 188 Query: 162 GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221 GNR + +E E+CRP I RQIEL +PK+L+ +G A+ + G W T Sbjct: 189 GNRAPTPLETELCRPFIERQIELAAPKVLVALGGPAGKALTGA-AEGILRLRGNWKIHRT 247 Query: 222 P-HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 P IP + T+HP L++ P K+ W + +K L L Sbjct: 248 PTGMEIPVMPTLHPAYLLRTPAQKRFAWRDFLAVKLKLAEL 288 >gi|256113158|ref|ZP_05454035.1| uracil-DNA glycosylase, family 4 [Brucella melitensis bv. 3 str. Ether] gi|265994572|ref|ZP_06107129.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|262765685|gb|EEZ11474.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] Length = 290 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 76/281 (27%), Positives = 129/281 (45%), Gaps = 31/281 (11%) Query: 11 QILTIALFYADSGVYW-VFDEPNNEATY---ESQRKEKSIDSAIQPITNIRH-------- 58 + + FYA++GV + + P + + + + +A QP +N Sbjct: 9 DMEGLLRFYAEAGVDVPLCETPIDRFAAATHPAPAQSRMQAAAQQPESNPAQAREERART 68 Query: 59 -----------------IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTIC 101 + + A A +A +L EL+ L +F C+L T+ + Sbjct: 69 VAVPSPSSKPVQAAMDLPDNAQIALAREAASQAETLEELREKLAAFDGCNLKFTAKNLCF 128 Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 A D+M IG P +++ G PF GK+G +L++M+++I + R +++I+ PW PP Sbjct: 129 ADGDPSSDIMFIGEAPGRDEDMEGLPFVGKSGQLLNRMIEAIGLKREEVYIANTIPWRPP 188 Query: 162 GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221 GNR + +E E+ RP I RQIEL +PK+L+ +G A+ + G W T Sbjct: 189 GNRAPTPLETELYRPFIERQIELAAPKVLVALGGPAGKALTGA-AEGILRLRGNWKIHRT 247 Query: 222 P-HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 P IP + T+HP L++ P K+ W + +K L L Sbjct: 248 PTGMEIPVMPTLHPAYLLRTPAQKRFAWRDFLAVKLKLAEL 288 >gi|73666677|ref|YP_302693.1| DNA polymerase-related protein [Ehrlichia canis str. Jake] gi|72393818|gb|AAZ68095.1| DNA polymerase-related protein [Ehrlichia canis str. Jake] Length = 261 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 66/262 (25%), Positives = 128/262 (48%), Gaps = 8/262 (3%) Query: 7 LSQEQILTIALFYADSGVYWVFDEPN-----NEATYESQRKEKSIDSAIQPITNIRHIHS 61 + +L + FY ++GV ++ N+ + + I+ + + Sbjct: 1 MDDLDLLEVLKFYHENGVDCTLEDIQYHVLKNKNLSLQDTDSIKSNLEGKKISMKENTET 60 Query: 62 PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121 + +A S+A+K ++ +LKS + SF C + + + +T+ A ++M+IG P ++ Sbjct: 61 YYLLKAQSLAEKCNNIEQLKSAIESFDGCDIKNLATNTVFADGNPKAEMMLIGEAPGANE 120 Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ 181 ++ G PF G +G +LDKML++I RT ++IS W PPGNR ++ E+ +C+P + + Sbjct: 121 DLKGIPFCGASGMLLDKMLKAIGFDRTTVYISNAVFWRPPGNRRPTDFEIAVCKPFVEKH 180 Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATVHPQELIQ 239 I LI PK+L+ +G+ ++ + G++ + I T HP L++ Sbjct: 181 IALIIPKMLVLVGSTACYAMLDSK-NPISKLRGRFHLYNNQFLQNSITTSIIFHPSYLLR 239 Query: 240 YPLIKKNTWHALITLKKALKNL 261 P+ K+ W L +K+ L Sbjct: 240 QPMQKRIAWEDLKQIKRYFDGL 261 >gi|254487011|ref|ZP_05100216.1| uracil-DNA glycosylase, C-terminal domain protein [Roseobacter sp. GAI101] gi|214043880|gb|EEB84518.1| uracil-DNA glycosylase, C-terminal domain protein [Roseobacter sp. GAI101] Length = 257 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 62/260 (23%), Positives = 116/260 (44%), Gaps = 11/260 (4%) Query: 5 RILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPL 63 + Q L + + + G + D P N + ++ Sbjct: 2 ESVEYHQALALLHWQIELGATEAICDAPVNRYEVPAAVEKPKPAKPGPGRVVPMAAGIDP 61 Query: 64 VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123 + +A A A +L +L++ +++F C L + + + + T G +MI+G P ++ Sbjct: 62 LAEATRFAAAAQTLEDLRAAMQAFEHCELKRGARNMVFSDGTPGARVMIVGEAPGRDEDR 121 Query: 124 SGKPFSGKTGNMLDKMLQSIEIMRTQ----IHISMISPWHPPGNRNLSNIEMEICRPIIM 179 G+PF G G +LD+ML +I++ RT ++I+ + PW PP NR+ E+ + +P ++ Sbjct: 122 EGRPFVGAAGQLLDRMLAAIDMGRTHADAPVYITNVLPWRPPQNRDPKPDEIAMMKPFLI 181 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 R IEL P++L+ +GN + G+W+ + + L HP L++ Sbjct: 182 RHIELAKPEVLVIVGNWAAQALLGKRG--ITRLRGQWAQVQ----GLAALPMFHPAYLLR 235 Query: 240 YPLIKKNTWHALITLKKALK 259 P K+ W L+ LK L Sbjct: 236 SPEFKREAWADLLELKARLA 255 >gi|260431599|ref|ZP_05785570.1| uracil-DNA glycosylase [Silicibacter lacuscaerulensis ITI-1157] gi|260415427|gb|EEX08686.1| uracil-DNA glycosylase [Silicibacter lacuscaerulensis ITI-1157] Length = 279 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 64/261 (24%), Positives = 117/261 (44%), Gaps = 9/261 (3%) Query: 1 MTSKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHI 59 M + L + + + GV + D P + + + + + Sbjct: 24 MGMESALDPFTARALLEWQVELGVTDAIVDTPVDRYALPDTAPKARKAATPLAAPQ-KPV 82 Query: 60 HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSD 119 V +A A A SL +L++ + +F C L + + A T G +MI+G P Sbjct: 83 KLDPVAEAKKAAAAASSLDQLRAAMETFAHCDLKRGARQLVFADGTAGAPVMIVGEAPGR 142 Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPII 178 ++ G+PF G+ G +LD+ML +I++ R ++I+ + PW PP NR+ E+ + +P + Sbjct: 143 EEDRVGRPFVGRAGQLLDRMLAAIDLDRAKNVYITNVLPWRPPQNRDPRPDEIAMMQPFV 202 Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238 R + L PK+L+ +GN + N + G+W +P L +HP L+ Sbjct: 203 ERHVALSKPKVLVVMGNISCQAVLNKRG--ITRLRGQW----NQALNLPVLPMLHPAYLL 256 Query: 239 QYPLIKKNTWHALITLKKALK 259 + P K+ W L+ L+ L+ Sbjct: 257 RQPHAKRQAWADLLELRAFLE 277 >gi|126727771|ref|ZP_01743601.1| hypothetical protein RB2150_10424 [Rhodobacterales bacterium HTCC2150] gi|126702898|gb|EBA02001.1| hypothetical protein RB2150_10424 [Rhodobacterales bacterium HTCC2150] Length = 264 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 62/268 (23%), Positives = 118/268 (44%), Gaps = 16/268 (5%) Query: 3 SKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDS------AIQPITN 55 + + + + D GV + D P N + + + +P Sbjct: 1 MESVFDYHSARAMLEWQIDLGVTETISDAPINRFEAVQEPVKPKATATVENGKPTKPAPP 60 Query: 56 IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115 ++ + V +A +A +A +L EL + F C L + + A L+I+G Sbjct: 61 VKPVAVDAVAEAQKLADQATTLEELAKIQSEFEMCDLKKGARKFVFADGNPKSRLLILGE 120 Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR---TQIHISMISPWHPPGNRNLSNIEME 172 P ++ G+PF+G+ G +LDKML +I++ R +++ + PW PP NR+ S E+ Sbjct: 121 APGRDEDQQGRPFAGEAGQLLDKMLAAIDMDRTGENSAYVTNVMPWRPPQNRDPSVEEIA 180 Query: 173 ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATV 232 + P + + IEL+SP +++ +GN + + G W+ P + Sbjct: 181 MMMPFVSKHIELVSPDVVILMGNVACLAALSKKG--ITRLRGNWATAFER----PVMPIF 234 Query: 233 HPQELIQYPLIKKNTWHALITLKKALKN 260 HP L++ P+ K++ W L+ ++ LK Sbjct: 235 HPAYLLRTPVAKRDAWADLLAVQAKLKK 262 >gi|190891014|ref|YP_001977556.1| DNA-directed DNA polymerase (uracil-DNA glycosylase) [Rhizobium etli CIAT 652] gi|190696293|gb|ACE90378.1| probable DNA-directed DNA polymerase protein (uracil-DNA glycosylase) [Rhizobium etli CIAT 652] Length = 296 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 91/292 (31%), Positives = 142/292 (48%), Gaps = 32/292 (10%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEP-NNEATY---------------------- 37 M S LS ++ + F+AD+GV W+ +E + Sbjct: 1 MISANDLSPAELAALLHFHADAGVEWLLEEEAVDRFAEFEAMKAARRPASAQQERPAAGE 60 Query: 38 --------ESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHD 89 S R + A VQQA +A+ A SL ELK+ + +F+ Sbjct: 61 RPSVGERQTSPRPTAAARPAPVSGPQPAIPDGEAVQQARFVAEAARSLGELKTAIEAFNG 120 Query: 90 CHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQ 149 C+L ++ STI A+ +M+IG PS D+ G PFSGK+G + DKML +I + R+ Sbjct: 121 CNLKHSARSTIFASGDAESGIMVIGSAPSAEDDREGLPFSGKSGQLFDKMLAAIGLNRSS 180 Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209 + ++ + PW PPGNR S E++ICRP I RQI L P+ +L +GN FF + Sbjct: 181 VLLTQVIPWRPPGNRAASAAEIDICRPFIERQIALAEPQAILLLGNFAARFFLGENDTIH 240 Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 G+W ++ IP +A++HPQ+L+ P+ K+ W+ L+ + LK+L Sbjct: 241 G-LRGRWKDIVIADRAIPAIASLHPQDLLTAPVNKRLAWNDLLAFQAKLKSL 291 >gi|163796468|ref|ZP_02190428.1| Phage SPO1 DNA polymerase-related protein [alpha proteobacterium BAL199] gi|159178318|gb|EDP62862.1| Phage SPO1 DNA polymerase-related protein [alpha proteobacterium BAL199] Length = 285 Score = 216 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 77/273 (28%), Positives = 135/273 (49%), Gaps = 21/273 (7%) Query: 8 SQEQILTIALFYADSGVYW-VFDEPNNEATYESQRKE-KSIDSAIQPITNIRHIHSPLVQ 65 S+ + +Y D+GV + D + + ++ +A +P+ + P + Sbjct: 4 SRAAARALLGWYVDAGVDEPMGDIAVDRFASVRPPPQIPTVAAAAKPVATVAQQAEPQAR 63 Query: 66 Q---------------ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 A S A A +L EL+ +L++F C L T+ +T+ A G + Sbjct: 64 PTRPARAAPVDGSLGAARSAAFSAKTLEELRGILQAFDGCPLKVTATNTVFADGVPGAPV 123 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNI 169 M++G P ++ +G+PF G +G +LD+ML +I + R + +IS + PW PPGNRN ++ Sbjct: 124 MVVGEAPGADEDRAGRPFVGLSGQLLDRMLATIGLDRQRNVYISNVLPWRPPGNRNPTDN 183 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP--HSIIP 227 EM +C P I R IEL +P++L+ +G + + + + G+W + P + +P Sbjct: 184 EMAMCLPFIQRHIELAAPRVLVLVGGTSVKTLLD-RQEGITRLRGRWFDWQGPSAAAAVP 242 Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 LAT HP L++ P K + W L+ LK+ L Sbjct: 243 ALATYHPAYLLRSPGQKASAWKDLLALKRWLVE 275 >gi|90420838|ref|ZP_01228743.1| uracil-DNA glycosylase, phage SPO1 DNA polymerase-related protein [Aurantimonas manganoxydans SI85-9A1] gi|90334813|gb|EAS48585.1| uracil-DNA glycosylase, phage SPO1 DNA polymerase-related protein [Aurantimonas manganoxydans SI85-9A1] Length = 306 Score = 216 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 72/295 (24%), Positives = 127/295 (43%), Gaps = 40/295 (13%) Query: 5 RILSQEQILTIALFYADSGVYWVF-DEPNNEATY-------------------------- 37 + +E + + +Y +GV V + P + Sbjct: 8 HPIDREAAIALLEWYRAAGVDAVTGEHPRDRFAETQAEIAARKARRGQPAGVAPAATGEP 67 Query: 38 ---------ESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFH 88 R + + P I V A A+ A +L EL++ L F Sbjct: 68 PRPAQEARVAPARTPQPAEEPGFPAPRIAVPDDIAVADARERARSATTLAELRAALDDFD 127 Query: 89 DCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRT 148 C+L ++ ST+ +E D+M++G P ++ +G PF G++G +L++ML+SI + R Sbjct: 128 GCNLRISARSTVFGDGSETADVMLVGEAPGREEDTAGVPFVGRSGQLLNRMLESIGLERE 187 Query: 149 QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQK 208 + ++ PW PPGNR + E +IC P + R IEL++PKIL+ +G+ + + Sbjct: 188 AVRVTNTVPWRPPGNRPPTPAETQICLPFVQRHIELVAPKILVCLGSPSAKAILGAQ-EG 246 Query: 209 TYQNLGKWSNLCTP---HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 + G+W+ I +A +HP L++ P K+ W LI L++ L Sbjct: 247 ILRVRGRWTTYSFGLEQCDAIDAVAMLHPAYLLRQPAQKRLAWRDLIALRERLAQ 301 >gi|254780743|ref|YP_003065156.1| putative uracil-DNA glycosylase [Candidatus Liberibacter asiaticus str. psy62] gi|254040420|gb|ACT57216.1| putative uracil-DNA glycosylase [Candidatus Liberibacter asiaticus str. psy62] Length = 261 Score = 216 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 261/261 (100%), Positives = 261/261 (100%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH Sbjct: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60 Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS Sbjct: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120 Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR Sbjct: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180 Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY Sbjct: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 Query: 241 PLIKKNTWHALITLKKALKNL 261 PLIKKNTWHALITLKKALKNL Sbjct: 241 PLIKKNTWHALITLKKALKNL 261 >gi|298290634|ref|YP_003692573.1| phage SPO1 DNA polymerase-related protein [Starkeya novella DSM 506] gi|296927145|gb|ADH87954.1| phage SPO1 DNA polymerase-related protein [Starkeya novella DSM 506] Length = 295 Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats. Identities = 77/289 (26%), Positives = 126/289 (43%), Gaps = 29/289 (10%) Query: 1 MTSKRILSQEQILT-IALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPIT---- 54 + L+ +L I F+ ++GV ++P + T + + + + + Sbjct: 2 LLMAPTLNDRDVLADILAFHVEAGVDVALGEQPVDRFTESAAERSAAAGRVVLAPSAESA 61 Query: 55 ----------------------NIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHL 92 +A A A +L L++LL F C L Sbjct: 62 PAPRPAPPVPAAHRPATPALAGEAPPPPDLAAVEAREAAASAPTLEALEALLEKFDGCPL 121 Query: 93 CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHI 152 T+ + A LM++G P ++I GKPF G++G +LD+ML +I I RT +I Sbjct: 122 KHTATRLVFADGNPQARLMLVGEAPGRDEDIEGKPFVGRSGKLLDRMLAAIGIDRTTAYI 181 Query: 153 SMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN 212 + + PW PPGNR + E IC P I RQIEL +P +L+ +G + + Sbjct: 182 ANVVPWRPPGNRTPTPQETAICLPFICRQIELANPDVLVCLGGPSAQTLLGIR-DGITKA 240 Query: 213 LGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 G+W + T +IP LAT HP L++ PL K+ W ++ ++ L L Sbjct: 241 RGRWMDYDTGSRVIPALATFHPAYLLRSPLGKRMAWRDMLAIEARLAGL 289 >gi|218675319|ref|ZP_03524988.1| probable DNA-directed DNA polymerase protein (uracil-DNA glycosylase) [Rhizobium etli GR56] Length = 296 Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats. Identities = 90/292 (30%), Positives = 141/292 (48%), Gaps = 32/292 (10%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEP-NNEATYES-------------------- 39 M S LS ++ + F+AD+GV W+ +E + Sbjct: 1 MISANDLSPAELAALLHFHADAGVEWLLEEEAVDRFAEFEAMKAARRPASAQQERPAVGE 60 Query: 40 ----------QRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHD 89 R + A VQQA +A+ A SL ELK+ + +F+ Sbjct: 61 RPNSGERQTLPRPTAAARPAPVSGPQPAIPDGEAVQQARFVAEAARSLAELKTAIEAFNG 120 Query: 90 CHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQ 149 C+L ++ STI A+ +M+IG PS D+ G PFSGK+G + DKML +I + R+ Sbjct: 121 CNLKHSARSTIFASGDAESGIMVIGSAPSAEDDREGLPFSGKSGQLFDKMLAAIGLNRSS 180 Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209 + ++ + PW PPGNR S E++ICRP I RQI L P+ +L +GN FF + Sbjct: 181 VLLTQVIPWRPPGNRAASAAEIDICRPFIERQIALAEPQAILLLGNFAARFFLGENDTIH 240 Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 G+W ++ IP +A++HPQ+L+ P+ K+ W+ L+ + LK+L Sbjct: 241 G-LRGRWKDIVIADRAIPAIASLHPQDLLTAPVNKRLAWNDLLAFQAKLKSL 291 >gi|170743515|ref|YP_001772170.1| phage SPO1 DNA polymerase-related protein [Methylobacterium sp. 4-46] gi|168197789|gb|ACA19736.1| phage SPO1 DNA polymerase-related protein [Methylobacterium sp. 4-46] Length = 300 Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats. Identities = 76/297 (25%), Positives = 120/297 (40%), Gaps = 45/297 (15%) Query: 8 SQEQILTIALFYADSGVYWVFDE-PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQ 66 +L F+ +GV DE P++ + R + +S P + P + Sbjct: 3 DDRDLLAYLDFHVAAGVDAALDEAPHDRFAESASRGRPASESRPAPESRPAPEPRPTPES 62 Query: 67 -------------------------------------------ADSIAQKACSLHELKSL 83 A +A+ A +L EL+ L Sbjct: 63 RPTPEPRPAAEPVPAPAAAPRPPARASTFGRSAAAEPGEAAGDARELARTAATLEELEQL 122 Query: 84 LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143 L F C L T+ + + A +M +G P ++ GKPF G++G +LD+M+ +I Sbjct: 123 LARFESCPLRFTAKNLVFADGEPTARVMFVGEAPGADEDRVGKPFMGRSGQLLDRMMAAI 182 Query: 144 EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 + RT ++ + PW PPGNRN + E+ C+P I RQI L P IL+ +G Sbjct: 183 GLDRTNAYVGNVVPWRPPGNRNPTPQEIATCKPFIERQIALADPDILVCLGGVATQT-LA 241 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 ++ G+W T I LAT+HP L++ PL K+ W L+ AL Sbjct: 242 ATKDGILKSRGRWFPYRTERREIRLLATLHPAYLLRQPLQKRLAWRDFRVLRAALDA 298 >gi|56695203|ref|YP_165551.1| uracil-DNA glycosylase [Ruegeria pomeroyi DSS-3] gi|56676940|gb|AAV93606.1| uracil-DNA glycosylase [Ruegeria pomeroyi DSS-3] Length = 261 Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats. Identities = 64/266 (24%), Positives = 115/266 (43%), Gaps = 14/266 (5%) Query: 3 SKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYES------QRKEKSIDSAIQPITN 55 + L L + + + GV + D P + + P Sbjct: 1 MESALDPHTALALLQWQVELGVTETILDAPLDRYALPETAPRPPAQAAADPRRPAMPAPP 60 Query: 56 IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115 + Q+A A+ SL L++ L F C L + + + A G +MIIG Sbjct: 61 PKAPEVDPAQEAVRAARAVGSLDALRTALAEFEHCELKRGARNLVFADGVPGARVMIIGE 120 Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEIC 174 P ++ G+PF G+ G +LD+ML +I + R++ +I+ + PW PP NR+ +E+ + Sbjct: 121 APGRDEDREGRPFVGRAGQLLDRMLAAIGLSRSESVYITNVLPWRPPQNRDPLPVEIGMM 180 Query: 175 RPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHP 234 +P + R + L P++L+ +GN + + G+W T +P L HP Sbjct: 181 KPFLERHVALAKPEVLVLMGNISCETVLGRRG--ITRLRGQW----TQAMGLPVLPMFHP 234 Query: 235 QELIQYPLIKKNTWHALITLKKALKN 260 L++ P +K+ W L+ L+ L+ Sbjct: 235 AYLLRQPQMKRQAWADLLELQAKLRE 260 >gi|89070681|ref|ZP_01157950.1| uracil-DNA glycosylase [Oceanicola granulosus HTCC2516] gi|89043702|gb|EAR49906.1| uracil-DNA glycosylase [Oceanicola granulosus HTCC2516] Length = 261 Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats. Identities = 58/256 (22%), Positives = 105/256 (41%), Gaps = 13/256 (5%) Query: 11 QILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADS 69 + + G D P + ++ R + + A + V +A Sbjct: 9 AAKAALDWQIELGADEAIGDAPVDRYALDAARAKPTAPVAAPNAVPVPAAPDDPVAEARR 68 Query: 70 IAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129 +A A L L + + F C L + + S + LMI+G P ++ +G+PF Sbjct: 69 LAAGARDLGGLAAAMEGFEHCALKAGARSFVFCDGNPDARLMIVGEAPGREEDRAGRPFV 128 Query: 130 GKTGNMLDKMLQSIEIMRTQI------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIE 183 G+ G +LD+ML +I + R +I+ + PW PP NR E+ + P + I Sbjct: 129 GRAGQLLDRMLAAIGMARAAPDAAHAVYITNVLPWRPPENRRPERAEIAMFLPFLEAHIA 188 Query: 184 LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI 243 L P++L+ +GN + + G W+ + +P L HP L++ P Sbjct: 189 LARPEVLVLMGNTPCDALLGRSG--ITRMRGSWTEV----LGVPALPMFHPAFLLRQPQA 242 Query: 244 KKNTWHALITLKKALK 259 K+ W L+ ++ L+ Sbjct: 243 KREAWADLLDVQARLR 258 >gi|153009985|ref|YP_001371200.1| phage SPO1 DNA polymerase-like protein [Ochrobactrum anthropi ATCC 49188] gi|151561873|gb|ABS15371.1| phage SPO1 DNA polymerase-related protein [Ochrobactrum anthropi ATCC 49188] Length = 285 Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats. Identities = 83/276 (30%), Positives = 128/276 (46%), Gaps = 26/276 (9%) Query: 11 QILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHI----------- 59 I + FYA++G+ E + E QR S +A P + R Sbjct: 9 DIEGLLRFYAEAGIDMPLSETPIDRFAEPQRPASSQPTAQMPNSPERARQQQPRPAPAPA 68 Query: 60 -HSPLVQQADSIAQKAC------------SLHELKSLLRSFHDCHLCSTSLSTICATQTE 106 S VQ A + A +L EL+ L +F C+L T+ + A Sbjct: 69 PTSKPVQAAADLPDTAQIALAREAAAQASTLEELREKLAAFDGCNLKFTAKNLCFADGDP 128 Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL 166 D+M IG P +++ G PF GK+G +L++M++SI++ R ++I+ PW PPGNR Sbjct: 129 SSDIMFIGQAPGRDEDMEGLPFVGKSGQLLNRMIESIDLKRESVYIANTIPWRPPGNRTP 188 Query: 167 SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS-I 225 + +E E+CRP I RQIEL SPK+L+ +G + + G W TP+ Sbjct: 189 TPLETELCRPFIERQIELASPKVLVALGGPAGKALTGAT-EGILRLRGNWKIHRTPNGLE 247 Query: 226 IPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 IP + T+HP L++ P K+ W + +K L L Sbjct: 248 IPVMPTLHPAYLLRTPAQKRFAWRDFLAVKLKLAEL 283 >gi|83952423|ref|ZP_00961154.1| uracil-DNA glycosylase [Roseovarius nubinhibens ISM] gi|83836096|gb|EAP75394.1| uracil-DNA glycosylase [Roseovarius nubinhibens ISM] Length = 267 Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats. Identities = 65/272 (23%), Positives = 112/272 (41%), Gaps = 19/272 (6%) Query: 3 SKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQ------PITN 55 L + + + G D P + E + + + +A + Sbjct: 1 MDSALDFHTARALLEWQVELGADEAIGDSPVDRYALEPRAPKPATPAAAPSPAEAAKLPP 60 Query: 56 IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115 + + V +A A A L LK+ + + C L + + + G +M+IG Sbjct: 61 VAAPKTDPVAEARKSALAAQDLAGLKAAMAGYEHCELKRGARQLVFSDGHPGARVMLIGE 120 Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR------TQIHISMISPWHPPGNRNLSNI 169 P ++ +GKPF G+ G MLD+ML +I + R +I+ + PW PP NR+ S Sbjct: 121 APGRDEDRAGKPFVGQAGQMLDRMLAAIGLDRGSDDPGQGAYITNVMPWRPPQNRDPSPE 180 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E+ + P + R + L +P +LL +GN + + G W+ P L Sbjct: 181 EIAMMVPFMERHVALANPDLLLLVGNISCQAGLGKRG--ITRLRGNWTEAYGK----PAL 234 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 HP L++ P K+ W L++LK L+ L Sbjct: 235 PIFHPAYLLRMPSAKREAWADLLSLKARLQGL 266 >gi|327193963|gb|EGE60838.1| putative DNA-directed DNA polymerase protein (uracil-DNA glycosylase) [Rhizobium etli CNPAF512] Length = 296 Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats. Identities = 91/292 (31%), Positives = 142/292 (48%), Gaps = 32/292 (10%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEP-NNEATY---------------------- 37 M S LS ++ + F+AD+GV W+ +E + Sbjct: 1 MISANDLSPAELAALLHFHADAGVEWLLEEEAVDRFAEFEAMKAARRPASAQQERPAAGE 60 Query: 38 --------ESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHD 89 S R + A VQQA +A+ A SL ELK+ + +F+ Sbjct: 61 SPSVGERQTSPRLTAAARPAPVSGPQPAIPDGEAVQQARFVAEAARSLGELKTAIEAFNG 120 Query: 90 CHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQ 149 C+L ++ STI A+ +M+IG PS D+ G PFSGK+G + DKML +I + R+ Sbjct: 121 CNLKHSARSTIFASGDAESGIMVIGSAPSAEDDREGLPFSGKSGQLFDKMLAAIGLNRSS 180 Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209 + ++ + PW PPGNR S E++ICRP I RQI L P+ +L +GN FF + Sbjct: 181 VLLTQVIPWRPPGNRAASAAEIDICRPFIERQIALAEPQAILLLGNFAARFFLGENDTIH 240 Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 G+W ++ IP +A++HPQ+L+ P+ K+ W+ L+ + LK+L Sbjct: 241 G-LRGRWKDIVIADRAIPAIASLHPQDLLTAPVNKRLAWNDLLAFQAKLKSL 291 >gi|85859396|ref|YP_461598.1| uracil DNA glycosylase superfamily protein [Syntrophus aciditrophicus SB] gi|85722487|gb|ABC77430.1| uracil DNA glycosylase superfamily protein [Syntrophus aciditrophicus SB] Length = 263 Score = 214 bits (546), Expect = 8e-54, Method: Composition-based stats. Identities = 51/237 (21%), Positives = 103/237 (43%), Gaps = 6/237 (2%) Query: 26 WVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQ--ADSIAQKACSLHELKSL 83 W P + T E +K + + + + + L+ +L +++ Sbjct: 29 WELRHPLSWTTAEGDQKSPFLGMKLASGVHEQDVKESLISSDITGPADNPLETLDDIRRD 88 Query: 84 LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143 + + H C L T + + +L+ +G P +++ G+PF G+ G++L +++ ++ Sbjct: 89 MEACHRCPLEKTRKNLVFGEGNPHSELVFVGEAPGADEDLQGRPFVGRAGHLLTRIIDAM 148 Query: 144 EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 + R ++I I PPGNRN E+E+C P ++RQ+E I P+I+ +G Sbjct: 149 GLKREDVYICNILKCRPPGNRNPLPEEIEVCEPWLIRQLEAIRPRIICALGTFAAQTLLK 208 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 G++ + I + T HP L++ P K+ W + + K L+ Sbjct: 209 KKGIPITVLRGQFHDY----HGIKLMPTYHPAYLLRNPGAKRQVWEDVQKIMKVLEA 261 >gi|209548539|ref|YP_002280456.1| phage SPO1 DNA polymerase-related protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534295|gb|ACI54230.1| phage SPO1 DNA polymerase-related protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 299 Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 97/295 (32%), Positives = 149/295 (50%), Gaps = 35/295 (11%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDE-----------------PNNEATYESQ--- 40 M S LS ++ + F+AD+GV W+ +E P + + Sbjct: 1 MISANDLSPAELAALLHFHADAGVEWLLEEEAIDRFAEFEAMKAARRPAAQTQPSAAGER 60 Query: 41 ------RKEKSIDSAIQPITNIRHIHSP--------LVQQADSIAQKACSLHELKSLLRS 86 R +A++P R P VQQA +A+ A SL ELK+ + + Sbjct: 61 TPLGENRTPPRPATAVRPAPAERAASGPQPAIPDGEAVQQARFVAESARSLAELKTAIEA 120 Query: 87 FHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM 146 F+ C+L ++ STI A+ +M+IG P D+ G PFSGK+G + DKML +I + Sbjct: 121 FNGCNLKHSARSTIFASGDAESGIMVIGSAPGAEDDREGVPFSGKSGQLFDKMLAAIGLT 180 Query: 147 RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206 R+ I ++ + PW PPGNR S EM+ICRP I RQI L PK +L +GN + FFF + Sbjct: 181 RSVILLTQVIPWRPPGNRAPSAAEMDICRPFIERQIALAQPKAILLLGNFSARFFFGEND 240 Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 G+W + +IP +A++HPQ+L+ P+ K+ W+ L+ + LK+L Sbjct: 241 TIHG-LRGRWKEIAAADCVIPAIASLHPQDLLTAPVNKRLAWNDLLAFQAKLKSL 294 >gi|154246315|ref|YP_001417273.1| phage SPO1 DNA polymerase-related protein [Xanthobacter autotrophicus Py2] gi|154160400|gb|ABS67616.1| phage SPO1 DNA polymerase-related protein [Xanthobacter autotrophicus Py2] Length = 307 Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 76/306 (24%), Positives = 123/306 (40%), Gaps = 47/306 (15%) Query: 1 MTSKRILSQEQ----ILTIALFYADSGVY-WVFDEPNNEATYESQRKEKS---------- 45 MT+ E I I FY ++GV V + P + + + +S Sbjct: 1 MTATPQDHPEDHLSDIADILAFYLEAGVDVAVGEAPVDRFAESAAEQARSRTQRPPAVPA 60 Query: 46 -------------------------------IDSAIQPITNIRHIHSPLVQQADSIAQKA 74 SA + V A A+ A Sbjct: 61 PDMPPPPTVSRPQASARPAPPAAPAPRSGTLSASAAGASALVTQPPDEAVMSAREAARNA 120 Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 SL L+++L F C L T+ + A +M +G P ++ G PF G++G Sbjct: 121 ESLDALRAILDGFEGCALKRTATRLVFADGNPKAKVMFVGEAPGRDEDQQGLPFVGRSGR 180 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 +LD M+ +I + RT +I+ + PW PPGNR + E +C P I RQIEL P IL+ +G Sbjct: 181 LLDLMMAAIGLDRTSAYIANVIPWRPPGNRTPTPQETAVCLPFIKRQIELADPDILVCLG 240 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 + + + G++ + + I +AT HP L++ PL K+ W ++ + Sbjct: 241 GPSAQALLA-TTEGITRLRGRFMDYESGTRTIRAIATFHPAYLLRTPLGKRLAWRDMLAV 299 Query: 255 KKALKN 260 + AL N Sbjct: 300 EAALAN 305 >gi|110680596|ref|YP_683603.1| uracil-DNA glycosylase, C-terminal [Roseobacter denitrificans OCh 114] gi|109456712|gb|ABG32917.1| uracil-DNA glycosylase, C-terminal [Roseobacter denitrificans OCh 114] Length = 259 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 65/260 (25%), Positives = 117/260 (45%), Gaps = 13/260 (5%) Query: 8 SQEQILTIALFYADSGV-YWVFDEPNNEATYES--QRKEKSIDSAIQPITNIRHIHSPLV 64 L + + + G + + P N Q K+K+ + + P + V Sbjct: 5 DFHHALALLDWQIELGATEAIGETPVNRYDLPDKIQPKQKAAQTTVAPAAARAAEKTDPV 64 Query: 65 QQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNIS 124 A A A L +L++ L F C L + + + + G +M+IG P +++ Sbjct: 65 DAARKAAFAAQDLDQLRAALAGFEHCDLKRGARNLVFSDGVAGARVMVIGEAPGREEDLQ 124 Query: 125 GKPFSGKTGNMLDKMLQSIEIMR----TQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180 G+PF G+ G +LD+ML +I++ R ++I+ + PW PP NR+ S+ E+ + RP + R Sbjct: 125 GRPFVGRAGQLLDRMLAAIDMGRDRQSDPVYITNVVPWRPPQNRDPSSDEIAMMRPFVER 184 Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 I L P++L+ +GN + + G+W +P L HP L++ Sbjct: 185 HIALAKPEVLVIMGNVSAQALLGKRG--ITRLRGQWVEAF----GVPALPMFHPAYLLRN 238 Query: 241 PLIKKNTWHALITLKKALKN 260 K+ W L++L+ L N Sbjct: 239 TAAKREAWADLLSLQARLHN 258 >gi|254467145|ref|ZP_05080556.1| uracil-DNA glycosylase [Rhodobacterales bacterium Y4I] gi|206688053|gb|EDZ48535.1| uracil-DNA glycosylase [Rhodobacterales bacterium Y4I] Length = 250 Score = 213 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 66/257 (25%), Positives = 112/257 (43%), Gaps = 10/257 (3%) Query: 7 LSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQ 65 + + + A+ G + D P + E + +A P + V Sbjct: 1 MDYWSARALLEWQAELGATEALCDAPVDRYALEQAAPKPKPGAAPAPPPKPKEADPAEV- 59 Query: 66 QADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISG 125 A A+ A SL L+ L +F C L + + + + G +MIIG P +++ G Sbjct: 60 -AQKAARGAASLPALRDALAAFDHCDLKRGARNLVFSDGQPGARVMIIGEAPGRDEDLQG 118 Query: 126 KPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIEL 184 KPF G+ G +LD+ML++I + R ++I+ + PW PP NR+ E+ + P + R + L Sbjct: 119 KPFVGRAGQLLDRMLEAIGLSRAENVYITNVLPWRPPQNRDPLPAEIAMLTPFLERHVAL 178 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK 244 P IL+ +GN + + G+W P + HP L++ P K Sbjct: 179 AEPDILVLMGNISCQAVLGKRG--ITRLRGQWDQAWNK----PVIPMFHPAYLLRQPAQK 232 Query: 245 KNTWHALITLKKALKNL 261 + W L+ LK L +L Sbjct: 233 RLAWADLLELKARLGSL 249 >gi|118590804|ref|ZP_01548205.1| hypothetical protein SIAM614_06538 [Stappia aggregata IAM 12614] gi|118436780|gb|EAV43420.1| hypothetical protein SIAM614_06538 [Stappia aggregata IAM 12614] Length = 320 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 73/298 (24%), Positives = 125/298 (41%), Gaps = 46/298 (15%) Query: 8 SQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQ--------------- 51 + + FYA +GV D+P + + + + Q Sbjct: 20 DPRHLEALLDFYAGAGVDCFLQDDPVDWVALTRAQAAQRAQAGSQVASSAQPQQPRQQTP 79 Query: 52 -----------------------PITNIRHIHSPLVQQADSIAQKA------CSLHELKS 82 + SP++ + IA +L EL++ Sbjct: 80 ASNFQGQATAPPVPAAPIAAQIGAVPPASMGQSPVLPDREIIAAARDLAASAPTLDELRN 139 Query: 83 LLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142 L +F C+L T+ + A LM +G P +++ G PF G++G +LD+ML + Sbjct: 140 CLSAFEGCNLKLTAKKLVFADGNPEAKLMFVGEAPGRDEDLQGLPFVGRSGQLLDRMLAA 199 Query: 143 IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202 I + R+ +I+ + PW PPGNR + E EIC+P I+RQIEL++P +L+F+G + Sbjct: 200 IGLDRSSAYIANVVPWRPPGNRTPTPQETEICKPFILRQIELVNPDVLVFLGAASAKTLL 259 Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 + G+W I +AT HP L++ PL K+ +W + +K+ L Sbjct: 260 GVQ-DGIRKMRGRWMTYPCKGREISAIATYHPAYLLRSPLEKRLSWRDFLAIKQKLGE 316 >gi|94970801|ref|YP_592849.1| phage SPO1 DNA polymerase-related protein [Candidatus Koribacter versatilis Ellin345] gi|94552851|gb|ABF42775.1| phage SPO1 DNA polymerase-related protein [Candidatus Koribacter versatilis Ellin345] Length = 273 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 57/264 (21%), Positives = 102/264 (38%), Gaps = 10/264 (3%) Query: 3 SKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSP 62 R L Q + FY + G+Y ++ P + AT S+ E + + + Sbjct: 1 MARTLDQNALSARLEFYREMGIYGLYRRPVD-ATAVSENPETPDEQYLPKKKEVTVTAEK 59 Query: 63 LVQQADSIAQKACSLHELKSLLRSFHDCHLCS-TSLSTICATQTEGQDLMIIGYTPSDSD 121 + K L ++ L C L + +LM +G P + Sbjct: 60 TLNVLQPTLSKPDGLKAIREDLGDCTRCVLHKQGRKQIVFGVGNPSAELMFVGEGPGADE 119 Query: 122 NISGKPFSGKTGNML-DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180 + G PF G+ G +L + + + + R ++I+ + PPGNR E + C P + R Sbjct: 120 DEQGIPFIGRAGQLLTNMITNGMGLKREDVYIANVVKCRPPGNRTPEREECDTCSPFLFR 179 Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI------IPTLATVHP 234 QIE+I PK+++ +G + + + G+ + TP + T HP Sbjct: 180 QIEVIQPKMIVALGAVAAKTLLGVN-EAMARLRGQIYDFSTPRRPGSDLYDGKLVVTYHP 238 Query: 235 QELIQYPLIKKNTWHALITLKKAL 258 L++ P K W L + + L Sbjct: 239 AYLLRDPRQKSEAWKDLQIVMRYL 262 >gi|114777353|ref|ZP_01452350.1| phage SPO1 DNA polymerase domain protein [Mariprofundus ferrooxydans PV-1] gi|114552135|gb|EAU54637.1| phage SPO1 DNA polymerase domain protein [Mariprofundus ferrooxydans PV-1] Length = 252 Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 60/249 (24%), Positives = 100/249 (40%), Gaps = 15/249 (6%) Query: 18 FYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKA--- 74 + + GV P + + +Q + + A QP + L Q + A A Sbjct: 11 YLREIGV----QTPVSLLSL-AQETQPPVAPAAQPSPVESEPAAALESQVSTPAPAADTV 65 Query: 75 --CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 SL EL + + C L T + DL+ IG P +++ G+PF G+ Sbjct: 66 VFKSLDELSATASTCRLCSLADTRTQVVFGVGNPQADLVFIGEAPGRDEDLQGEPFVGRA 125 Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192 G +LD+M+ +I + R ++I PP NR+ E++ C +Q++ + PK++ Sbjct: 126 GQLLDRMMAAIGLDRDAVYIMNTIKCRPPNNRDPRADEVKACNLWFEQQLDALQPKMICL 185 Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 +G DA G W IP T HP L++ P K+ W L Sbjct: 186 LGRVAAQTVLGTDATL-GALRGAWHEY----HGIPVWVTYHPAYLLRSPQQKQKGWQDLC 240 Query: 253 TLKKALKNL 261 L ++L Sbjct: 241 LLADRYRDL 249 >gi|114705011|ref|ZP_01437919.1| hypothetical protein FP2506_08741 [Fulvimarina pelagi HTCC2506] gi|114539796|gb|EAU42916.1| hypothetical protein FP2506_08741 [Fulvimarina pelagi HTCC2506] Length = 308 Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats. Identities = 80/295 (27%), Positives = 128/295 (43%), Gaps = 44/295 (14%) Query: 10 EQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPITNIRHIHS------- 61 Q + + FY+++G+ + D P + E+ P T + Sbjct: 12 NQAIALLNFYSEAGIDTFWGDHPRDRFAETRAEIERRSGGRGSPATTTQPTRRNEEASPQ 71 Query: 62 --------------------------------PLVQQADSIAQKACSLHELKSLLRSFHD 89 + A A+ A SL EL+ LRSF Sbjct: 72 ASPAAASAPVRDARLDEAQAGFPAPSLPISGDAAIADARERARSAASLAELEDALRSFEG 131 Query: 90 CHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQ 149 C L T+ S + E DLM++G P +++ G+PF GK+G +LD+ML SI + R Sbjct: 132 CALRVTAKSCVFGNGREDADLMLVGEAPGRDEDLEGEPFVGKSGQLLDRMLLSIGLEREA 191 Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209 + ++ PW PPGNR + +E +C P + R IEL+ PKIL+ +GN + + Sbjct: 192 VRVTNTVPWRPPGNRQPTPVETAMCLPFLQRHIELVRPKILVALGNPASIALLDAK-EGI 250 Query: 210 YQNLGKWSNLCTP---HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + GKW + + IP +A +HP L++ P K+ W L+ LK L++L Sbjct: 251 LRLRGKWKSYTMGLGENDQIPAMAMLHPAYLLRNPAQKRLAWRDLLMLKAKLEDL 305 >gi|227821368|ref|YP_002825338.1| DNA polymerase [Sinorhizobium fredii NGR234] gi|227340367|gb|ACP24585.1| DNA polymerase [Sinorhizobium fredii NGR234] Length = 293 Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats. Identities = 86/292 (29%), Positives = 138/292 (47%), Gaps = 35/292 (11%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATY--------------ESQRKEKS 45 M S LS ++ + F+A++GV W+ DEP + R+ Sbjct: 1 MISANDLSASELAALLAFHAEAGVEWLLEDEPVDRLAEFEAMKAKRADARAAPPVRQATP 60 Query: 46 I-------------------DSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRS 86 +A + V +A A+ A SL EL++ + + Sbjct: 61 PEVQGGRVQPATSGKARDARPAAPSVPPTVAIPDEQAVSEARFAAESARSLAELRTAMEA 120 Query: 87 FHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM 146 F C+L +++ + + A +M++G P D+ G+PF+G+ G+ML++ML I + Sbjct: 121 FTGCNLKNSARNLVFADGNAASGIMVVGPMPYAEDDRDGQPFAGRHGDMLERMLSGIGLS 180 Query: 147 RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206 R+ I ++ + PW PPGNR S E +ICRP I RQI L P+ +L +GN T FFF + Sbjct: 181 RSDILLTNVVPWRPPGNRVPSGREADICRPFIERQIALAEPRHMLLLGNFTARFFFGTNE 240 Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 Q G+W L ++P LAT+HPQ+LI P+ K+ W L+ K + Sbjct: 241 TIH-QTRGQWRELSAGGHLVPALATLHPQDLISAPVNKRFAWQDLLAFKARI 291 >gi|149200965|ref|ZP_01877940.1| uracil-DNA glycosylase [Roseovarius sp. TM1035] gi|149145298|gb|EDM33324.1| uracil-DNA glycosylase [Roseovarius sp. TM1035] Length = 267 Score = 211 bits (537), Expect = 8e-53, Method: Composition-based stats. Identities = 63/270 (23%), Positives = 116/270 (42%), Gaps = 18/270 (6%) Query: 3 SKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHS 61 + +LS L ++ + G + D P N + + + + S Sbjct: 1 MESMLSPHDALASLIWQIELGATEAIGDAPINRYELPEKVAKPAAVPKTEAKPAALTAPS 60 Query: 62 -----PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYT 116 V+ A + A A L L++ L ++ C L + + + +MIIG Sbjct: 61 LGAGVDPVEVARAAAAAAMDLEGLRAALGAYPHCDLRRGARNLVFGDGNPAARVMIIGEA 120 Query: 117 PSDSDNISGKPFSGKTGNMLDKMLQSIEIMR------TQIHISMISPWHPPGNRNLSNIE 170 P ++ GKPF G+ G +LD+M+Q+I + R ++I+ + PW PP NR+ + E Sbjct: 121 PGRDEDQQGKPFVGRAGQLLDRMVQAIGLSRGAQAPQDAVYITNVLPWRPPQNRDPNAEE 180 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230 + + RP + R + L++P +++ +GN + + G+W+ P L Sbjct: 181 IAMMRPFVARHVALVNPAVIVLMGNISCEAGLGQRG--ITRLRGQWAEAYGK----PALP 234 Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALKN 260 HP L++ P K+ W L+ LK L+ Sbjct: 235 MFHPAYLLRNPAAKREAWADLLALKARLRE 264 >gi|126740581|ref|ZP_01756268.1| uracil-DNA glycosylase [Roseobacter sp. SK209-2-6] gi|126718382|gb|EBA15097.1| uracil-DNA glycosylase [Roseobacter sp. SK209-2-6] Length = 264 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 62/261 (23%), Positives = 110/261 (42%), Gaps = 10/261 (3%) Query: 3 SKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNI--RHI 59 + L + + + G + + P + + + +K+ + + + Sbjct: 1 MESALDYWSAKALLEWQVELGATEALSEAPIDRYSLQPSAPQKTASNKSRTPEPAVEKPK 60 Query: 60 HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSD 119 V A AQ A SL LK + F C L + + + + G ++M+IG P Sbjct: 61 PVDPVAVARKAAQAASSLPALKEAIAGFEHCGLKRGARNLVFSDGQAGANVMVIGEAPGR 120 Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPII 178 +++ GKPF G+ G MLD+ML +I + R++ +I+ + PW PP NR+ E+ + P + Sbjct: 121 DEDLQGKPFVGRAGQMLDRMLTAIGLSRSENVYITNVLPWRPPQNRDPQAEEIAMMMPFL 180 Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238 R + L P L+ +GN + + G W P + HP L+ Sbjct: 181 ERHVALAQPDFLVLMGNISCQAVLGKRG--ITRLRGNW----DQAWGKPVMPMFHPAFLL 234 Query: 239 QYPLIKKNTWHALITLKKALK 259 + P K+ W L+ LK L Sbjct: 235 RQPHQKRQAWADLLELKARLN 255 >gi|15888330|ref|NP_354011.1| DNA polymerase [Agrobacterium tumefaciens str. C58] gi|15156000|gb|AAK86796.1| DNA polymerase [Agrobacterium tumefaciens str. C58] Length = 296 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 90/296 (30%), Positives = 135/296 (45%), Gaps = 37/296 (12%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDE-PNNEATYESQRKEKSIDSAIQPITNI--- 56 M + LS ++ + F+AD+GV W+ +E P + + + A P Sbjct: 1 MIAAHDLSPAELAALLHFHADAGVDWMLEEAPVDRFAEFAAARPMPGQDAATPARQAQSP 60 Query: 57 --------------------------------RHIHSPLVQQADSIAQKACSLHELKSLL 84 V A A+ A SL EL++ L Sbjct: 61 ADRRTDAPQRQAPGRSAPARGAPAAPAIQQNVAMPDEQAVSAARFAAESARSLGELRTAL 120 Query: 85 RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIE 144 F+ C+L +++ +TI + +M+IG P D+ G PF+GKTG +L++ML +I Sbjct: 121 EGFNGCNLKNSARNTIFSEGDPASAIMVIGPMPDADDDREGTPFAGKTGQLLERMLAAIG 180 Query: 145 IMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204 + R+ I I + PW PPGNR + EM+ICRP I RQI L PK LL +GN T FFF Sbjct: 181 LERSAIMIGNVVPWRPPGNRPPTQAEMDICRPFIERQIALAEPKHLLLLGNFTARFFFGG 240 Query: 205 DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 G+W ++ H I+P LA++HPQEL+ P K W L+ + + Sbjct: 241 TGTIHT-LRGQWRDVAAGHLILPALASLHPQELLNAPASKSLAWQDLLAFQTKITE 295 >gi|88606724|ref|YP_505870.1| uracil-DNA glycosylase [Anaplasma phagocytophilum HZ] gi|88597787|gb|ABD43257.1| uracil-DNA glycosylase, family 4 [Anaplasma phagocytophilum HZ] Length = 290 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 65/283 (22%), Positives = 122/283 (43%), Gaps = 25/283 (8%) Query: 1 MTSK-RILSQEQI---LTIALFYADSGVYWVFD---EPNNEATYESQRKEKSIDSAIQPI 53 MT + + E I + FY DSGV + P++ + + K + + Sbjct: 1 MTDEHNKPNVEDIKMFAEVLRFYHDSGVTHTLNDDLHPDDTLSPANFEKSPVVPDRAKTR 60 Query: 54 TNIRHIHS--------------PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLST 99 + + + V++A A L EL++ + +F C + +++T Sbjct: 61 ESQEIVLNKTSNKKSSSNANMLQWVEEARKAAANCVDLAELRAAVCAFEGCEIKKAAVNT 120 Query: 100 ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPW 158 + + +M+IG P +++ G PF G +G +LDKM +I + R + I+IS W Sbjct: 121 VFSDGNPKSKIMLIGEAPGSTEDREGIPFCGASGQLLDKMFAAINLNRSSNIYISNTVFW 180 Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218 PPGNR ++ E+E+CRP + + I L+ P +++ +G+ + GK+ Sbjct: 181 RPPGNRKPTDFELEVCRPFVEKHISLVDPDVVVMVGSTACYSLLQ-TPDNISRLRGKFYE 239 Query: 219 LCTPH--SIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 I + HP L++ P K+ W L L+ ++ Sbjct: 240 YTNSFLSRSITAMVIFHPAYLLRQPQQKRLAWEDLKMLRAYIE 282 >gi|126734673|ref|ZP_01750419.1| phage SPO1 DNA polymerase-related protein [Roseobacter sp. CCS2] gi|126715228|gb|EBA12093.1| phage SPO1 DNA polymerase-related protein [Roseobacter sp. CCS2] Length = 263 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 60/257 (23%), Positives = 112/257 (43%), Gaps = 17/257 (6%) Query: 14 TIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQP----ITNIRHIHSPLVQQAD 68 + + + G + D P + E+ + + +A + + V A Sbjct: 12 ALLEWQVELGATDAILDAPVDRYALEAAKPAPKVAAATEKPAAAPVPTKAPEVDAVALAR 71 Query: 69 SIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128 + A+ A L+ L S +++F C L + S + +MIIG P ++ +G+PF Sbjct: 72 TAAETAGDLNALSSAMQAFEHCELKKGARSFVFCDGNPAARVMIIGEAPGREEDRAGRPF 131 Query: 129 SGKTGNMLDKMLQSIEIMR------TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQI 182 G+ G +LD+ML++I++ R ++I+ + PW PP NR E+ + P + R + Sbjct: 132 VGRAGQLLDRMLEAIQMGRAADDAARSVYITNVLPWRPPSNRTPDKDEIAMMLPFLERHV 191 Query: 183 ELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL 242 L P+I++ +GN + G W ++ P L HP L++ P+ Sbjct: 192 ALADPEIVVLMGNTPCQALLGRTG--ITRMRGNWVDVLGK----PCLPMFHPAYLLRNPI 245 Query: 243 IKKNTWHALITLKKALK 259 K+ W L+ L L+ Sbjct: 246 AKREAWADLLDLNARLR 262 >gi|213018713|ref|ZP_03334521.1| putative DNA glycosylase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212995664|gb|EEB56304.1| putative DNA glycosylase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 211 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 61/203 (30%), Positives = 111/203 (54%), Gaps = 3/203 (1%) Query: 60 HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSD 119 S + +A +A + S+ EL+S ++SF C + T+ +T+ + +M++G P Sbjct: 3 PSDWIIEARKLASECGSVDELRSAVKSFEGCEIKKTATNTVFSDGNPNAKIMLVGEAPGA 62 Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIM 179 ++++ G PF G +G +LDKML +I + RT+++IS W PPGNR +++E+++CRP + Sbjct: 63 NEDLKGIPFCGASGMLLDKMLGAINLDRTKVYISNTVFWRPPGNRKPTDLELDMCRPFVE 122 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATVHPQEL 237 + I L+ P+IL+F+G + + + GK+ + I T A HP L Sbjct: 123 KHIALVLPQILIFVGGIACYSLLD-NTKTISNLRGKFHTYTNQYLSHAITTAAIFHPAYL 181 Query: 238 IQYPLIKKNTWHALITLKKALKN 260 ++ P K+ W L +++ L N Sbjct: 182 LRQPAQKRLAWEDLKKIREYLDN 204 >gi|116251217|ref|YP_767055.1| uracil-DNA glycosylase [Rhizobium leguminosarum bv. viciae 3841] gi|115255865|emb|CAK06946.1| putative uracil-DNA glycosylase [Rhizobium leguminosarum bv. viciae 3841] Length = 299 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 93/295 (31%), Positives = 142/295 (48%), Gaps = 35/295 (11%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEP-NNEATY---------------------- 37 M S LS ++ + F+AD+GV W+ +E + Sbjct: 1 MISANDLSPAELAALLHFHADAGVEWLLEEEAIDRFAEFEAMKAARRPAAQAQQQRPAAG 60 Query: 38 -----------ESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRS 86 + + VQQA +A+ A SL ELK+ + S Sbjct: 61 ERPAPGQAQVRPNAAVRPAPAERAASGPQPAIPDGEAVQQARFVAETARSLVELKTAIES 120 Query: 87 FHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM 146 F+ C+L ++ STI A+ +M+IG PS D+ G PFSGK+G + DKML +I + Sbjct: 121 FNGCNLKHSARSTIFASGDAESGIMVIGSAPSAEDDREGMPFSGKSGQLFDKMLAAIGLT 180 Query: 147 RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206 R+ I ++ + PW PPGNR S EM+ICRP I RQI L PK +L +GN + FFF + Sbjct: 181 RSAILLTQVIPWRPPGNRAPSAAEMDICRPFIERQIALAEPKAILLLGNFSARFFFGEND 240 Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 G+W + +IP +A++HPQ+L+ P+ K+ W+ L+ + LK+L Sbjct: 241 TIHG-LRGRWKEIAAADCVIPAIASLHPQDLLTAPVNKRLAWNDLLAFQAKLKSL 294 >gi|254461237|ref|ZP_05074653.1| uracil-DNA glycosylase [Rhodobacterales bacterium HTCC2083] gi|206677826|gb|EDZ42313.1| uracil-DNA glycosylase [Rhodobacteraceae bacterium HTCC2083] Length = 263 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 65/257 (25%), Positives = 114/257 (44%), Gaps = 11/257 (4%) Query: 7 LSQEQILTIALFYADSGVYW-VFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLV- 64 L + + + GV + + P N + + K+ + +A I + V Sbjct: 9 LDYHTARALLEWQVEFGVDETMSENPVNRFEVKPEPKKTAPVAAPPKIEAGIAPVADKVD 68 Query: 65 --QQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDN 122 A +A A + LK+ L F C L + + + A T G +M+IG PS ++ Sbjct: 69 GAALARDVAMAAQDIGALKTALEGFEACELKRGARNMVFADGTFGGRVMVIGEAPSRDED 128 Query: 123 ISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQ 181 SG PF+G TG +LD ML+SI++ R + +++ + PW P ++S ++ + P + R Sbjct: 129 HSGLPFTGDTGVLLDNMLKSIDLSRAETVYLTNVLPWRLPRGADVSEADLAMMMPFVERH 188 Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241 + L P IL+ +GN + G+W +P ++ HP+ L+ P Sbjct: 189 VALAKPDILVLMGNVACQAVLGKRG--ITRLRGQW----GEAMGLPVISMYHPEFLLNNP 242 Query: 242 LIKKNTWHALITLKKAL 258 K+ W L+ LK L Sbjct: 243 AKKREAWADLLALKAKL 259 >gi|294675958|ref|YP_003576573.1| uracil-DNA glycosylase [Rhodobacter capsulatus SB 1003] gi|294474778|gb|ADE84166.1| uracil-DNA glycosylase [Rhodobacter capsulatus SB 1003] Length = 270 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 66/272 (24%), Positives = 117/272 (43%), Gaps = 19/272 (6%) Query: 3 SKRILSQEQILTIALFYADSGV-YWVFDEPNNEATY-----ESQRKEKSIDSAIQPITNI 56 +S + L + + G V D P N ++ A +P + Sbjct: 5 PAPEISYDAALAAFEWLIELGATDPVGDAPVNRYDLVTPEPAPAPPPQAETRAPRPAPVL 64 Query: 57 RHIHS-PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115 + + V A +A +A +L +L+ + F C L + +T+ +M+IG Sbjct: 65 APVETVDPVAVARGLAARAATLDDLREAILGFDHCPLKRGARNTVFCDGNPKARVMLIGE 124 Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI------HISMISPWHPPGNRNLSNI 169 P ++ GKPF G+ G +LD+ML ++ + R +I+ + PW PPGNR Sbjct: 125 APGKDEDAQGKPFVGRAGQLLDRMLAAVGLDRAAPDPGTAVYITNVMPWRPPGNREPEPA 184 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E+ + P + R +EL+ P +++ +GN N+ + G W+ P L Sbjct: 185 EIAMMGPFLARHVELVDPDLIVLMGNTACAAALNSRG--ITRLRGSWTQAF----GRPAL 238 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 T+HP L++ P+ K+ W L+ L+ L L Sbjct: 239 PTLHPANLLRTPINKRLVWADLLELRAKLNAL 270 >gi|86356942|ref|YP_468834.1| DNA polymerase bacteriophage-type (uracil-DNA glycosylase) protein [Rhizobium etli CFN 42] gi|86281044|gb|ABC90107.1| probable DNA polymerase bacteriophage-type (uracil-DNA glycosylase) protein [Rhizobium etli CFN 42] Length = 297 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 92/293 (31%), Positives = 143/293 (48%), Gaps = 33/293 (11%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEP-NNEATYESQ------------RKEKSID 47 M S LS ++ + F+AD+GV W+ +E + ++ + Sbjct: 1 MISVNDLSPAELAALLHFHADAGVEWLQEEEAVDRFAEFEAMKAARRPAAQAQQERPIAE 60 Query: 48 SAIQPITN-------------------IRHIHSPLVQQADSIAQKACSLHELKSLLRSFH 88 P VQQA +A+ A SL ELK+ + +F+ Sbjct: 61 ERPLPGQRQTSPRPSAAARPAPASGPQPAIPDGEAVQQARFVAEAARSLSELKTAIEAFN 120 Query: 89 DCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRT 148 C+L ++ STI A+ +M+IG PS D+ G PFSGK+G + DKML +I + R+ Sbjct: 121 GCNLKHSARSTIFASGDADSGIMMIGSAPSAEDDREGTPFSGKSGQLFDKMLAAIGLSRS 180 Query: 149 QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQK 208 + ++ + PW PPGNR S EM+ICRP I RQI L P+ +L +GN FFF + Sbjct: 181 SVLLTQVIPWRPPGNRAASPAEMDICRPFIERQIALAEPQAILLLGNFAARFFFGENDTI 240 Query: 209 TYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 G+W + IIPT+A++HPQ+L+ P+ K+ W+ L+ + L +L Sbjct: 241 HG-LRGRWREIAVAGRIIPTIASLHPQDLLTAPVNKRLAWNDLLVFQAKLNSL 292 >gi|312114358|ref|YP_004011954.1| phage SPO1 DNA polymerase-related protein [Rhodomicrobium vannielii ATCC 17100] gi|311219487|gb|ADP70855.1| phage SPO1 DNA polymerase-related protein [Rhodomicrobium vannielii ATCC 17100] Length = 289 Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats. Identities = 77/271 (28%), Positives = 125/271 (46%), Gaps = 26/271 (9%) Query: 15 IALFYADSGVYWVFDEPNNEATYESQRKEKSID------------------------SAI 50 + +Y GV + + E R E+ + +A Sbjct: 17 LLEWYRAMGVDETIADETRDWLSEIPRAEQPLPKGIDVDANVNRKPLTRERADLTHLAAP 76 Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 + S V A +A+ A SL EL++LL SF C L +T+ + + L Sbjct: 77 TRAAPVELPASNDVMAARELARSAKSLEELRALLESFEGCGLKATASRLCLSRGSPSAPL 136 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170 M+IG P ++ G+PF G+ G +LD+ML +I + +I+ I W PPGNR S E Sbjct: 137 MLIGEAPGKDEDRLGQPFVGRAGQLLDRMLAAIGLTEADFYITNIVFWRPPGNRTPSPEE 196 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230 + +C+P + RQIEL++P+I++F+GN + GKW L H + +A Sbjct: 197 VLVCQPFVERQIELLAPRIVVFLGNAAARQLTGATEGIM-KLRGKWLELP-GHPGVRAMA 254 Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALKNL 261 T+HP L++ P+ K+ W L+ ++ AL L Sbjct: 255 TLHPAYLLRTPIAKRLAWRDLLAVRAALDAL 285 >gi|58697041|ref|ZP_00372503.1| putative phage DNA polymerase [Wolbachia endosymbiont of Drosophila simulans] gi|58536691|gb|EAL59977.1| putative phage DNA polymerase [Wolbachia endosymbiont of Drosophila simulans] Length = 249 Score = 208 bits (528), Expect = 9e-52, Method: Composition-based stats. Identities = 60/203 (29%), Positives = 110/203 (54%), Gaps = 3/203 (1%) Query: 60 HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSD 119 S + +A +A K S+ EL+S ++SF C + T+ +T+ + +M++G P Sbjct: 41 PSDWIIEARKLAGKCGSVDELRSAVKSFEGCEIKKTATNTVFSDGNPNAKIMLVGEAPGA 100 Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIM 179 ++++ G PF G +G +LDKML +I + RT+++IS W PPGNR +++E+++CRP + Sbjct: 101 NEDLQGIPFCGASGMLLDKMLNAINLDRTKVYISNTVFWRPPGNRKPTDLELDMCRPFVE 160 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATVHPQEL 237 + I L+SP+IL+ +G ++ G++ + + I T A HP L Sbjct: 161 KHIALVSPQILILVGGIACYSLLDSTK-TISNLRGRFHTYTNQYLSNSITTAAIFHPAYL 219 Query: 238 IQYPLIKKNTWHALITLKKALKN 260 ++ P K+ W +++ L N Sbjct: 220 LRQPAQKRLAWEDSKKIREYLDN 242 >gi|15964784|ref|NP_385137.1| hypothetical protein SMc02375 [Sinorhizobium meliloti 1021] gi|307309672|ref|ZP_07589324.1| phage SPO1 DNA polymerase-related protein [Sinorhizobium meliloti BL225C] gi|15073962|emb|CAC45603.1| Putative DNA polymerase bacteriophage-type [Sinorhizobium meliloti 1021] gi|306899884|gb|EFN30507.1| phage SPO1 DNA polymerase-related protein [Sinorhizobium meliloti BL225C] Length = 286 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 91/287 (31%), Positives = 140/287 (48%), Gaps = 31/287 (10%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDE-PNNEATYESQRKEKSIDSAIQPITNIRH- 58 M S LS+ ++ + F+A++GV W+ +E P + K + S P T Sbjct: 1 MISANDLSRSELAALLAFHAEAGVEWLLEEEPVDRLAEFEAMKSRRAQSRAVPQTGATAA 60 Query: 59 ---------------------------IHSPLVQQADSIAQKACSLHELKSLLRSFHDCH 91 +++A +A A SL EL++ + +F C+ Sbjct: 61 EPQQSAPPAAARERRPAPPAPPPVVAIPDEQAIKEAQFVADAARSLGELRTAMEAFAGCN 120 Query: 92 LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH 151 L +++ + + A + +MIIG P D+ G+PF+G+ G ML++ML I + R + Sbjct: 121 LRNSARNLVFAEGSAASGVMIIGPMPYADDDRDGRPFAGRHGEMLERMLSGIGLSREDVL 180 Query: 152 ISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQ 211 ++ PW PPGNR S E +ICRP I RQI L PK LL +GN T FFF + +Q Sbjct: 181 LANAVPWRPPGNRVPSAREADICRPFIERQIALAEPKQLLLLGNFTARFFFG--GETIHQ 238 Query: 212 NLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 G+W L + IPTLAT+HPQ+L+ P+ K+ W L+ K L Sbjct: 239 LRGEWRELTFGGTSIPTLATLHPQDLVAAPINKRFAWLDLLAFKSRL 285 >gi|84684257|ref|ZP_01012159.1| hypothetical protein 1099457000262_RB2654_17451 [Maritimibacter alkaliphilus HTCC2654] gi|84668010|gb|EAQ14478.1| hypothetical protein RB2654_17451 [Rhodobacterales bacterium HTCC2654] Length = 264 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 63/268 (23%), Positives = 111/268 (41%), Gaps = 16/268 (5%) Query: 3 SKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIR---H 58 + L Q + +Y + GV V + P + + + A P Sbjct: 1 MESALDWHQAKALLEWYVELGVTDAVAEAPIDRYELKPEPPRTPAAPAPVPEGPTPLREV 60 Query: 59 IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPS 118 + V A A A SL L ++++ L + S + + +MI+G P Sbjct: 61 PRTDWVAVAKEHAAGAGSLEALAEAMQAYDGSPLKKGARSFVFSDGNPAARVMIVGEGPG 120 Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI------HISMISPWHPPGNRNLSNIEME 172 ++ GKPF G G +LD+M +I + R +I+ + P+ PPGNRN + E+ Sbjct: 121 AEEDREGKPFVGPAGRLLDQMFAAIGLNRATPDAQNALYITNVVPYRPPGNRNPTPEEIA 180 Query: 173 ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATV 232 + P ++R IEL P I++ +GN + + G W+ + P L Sbjct: 181 MFTPFLLRHIELADPDIIIPMGNIALTALLDRQG--ITKLRGTWTEVLGK----PALPMF 234 Query: 233 HPQELIQYPLIKKNTWHALITLKKALKN 260 HP L++ P+ K+ W L+ ++ L+ Sbjct: 235 HPSYLLRNPISKREAWADLLDIQAKLRA 262 >gi|241203823|ref|YP_002974919.1| phage SPO1 DNA polymerase-related protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857713|gb|ACS55380.1| phage SPO1 DNA polymerase-related protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 299 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 94/295 (31%), Positives = 143/295 (48%), Gaps = 35/295 (11%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEP-NNEATYESQRK----------------- 42 M S LS ++ + F+AD+GV W+ +E + K Sbjct: 1 MISANDLSPAELAALLHFHADAGVEWLLEEEAIDRFAEFEAMKAARRPAAQAQQQRPAAG 60 Query: 43 EKSIDSAI----------------QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRS 86 E+ VQQA +A+ A SL ELK+ + + Sbjct: 61 ERPAPGQSPARPNAAARPAPAERAASGPQPAIPDGEAVQQARFVAETARSLVELKTAIET 120 Query: 87 FHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM 146 F+ C+L ++ STI A+ +M+IG PS D+ G PFSGK+G + DKML +I + Sbjct: 121 FNGCNLKHSARSTIFASGDTESGIMVIGSAPSAEDDREGLPFSGKSGQLFDKMLAAIGLT 180 Query: 147 RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206 R+ I ++ + PW PPGNR S EM+ICRP I RQI L PK +L +GN + FFF + Sbjct: 181 RSTILLTQVIPWRPPGNRAPSAAEMDICRPFIERQIALAEPKAILLLGNFSARFFFGEND 240 Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 G+W + +IP +A++HPQ+L+ P+ K+ W+ L+ + LK+L Sbjct: 241 TIHG-LRGRWKEIAAADCVIPAIASLHPQDLLTAPVNKRLAWNDLLAFQAKLKSL 294 >gi|260575952|ref|ZP_05843947.1| phage SPO1 DNA polymerase-related protein [Rhodobacter sp. SW2] gi|259021878|gb|EEW25179.1| phage SPO1 DNA polymerase-related protein [Rhodobacter sp. SW2] Length = 262 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 63/260 (24%), Positives = 120/260 (46%), Gaps = 17/260 (6%) Query: 7 LSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQ 65 + + L + D G + D P N + + +Q + ++ V Sbjct: 10 MDGQVALAALAWQVDLGATEAIGDAPVNRYEM----PDAVAVAKVQSAPVVAAPYADPVA 65 Query: 66 QADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISG 125 A + A A +L EL++ + +F C L + +T+ A +M+IG P ++ G Sbjct: 66 VARAAAAGAGTLAELRAAMEAFDLCDLKRGARNTVFADGNPNARVMLIGEAPGRDEDAEG 125 Query: 126 KPFSGKTGNMLDKMLQSIEIMRTQI------HISMISPWHPPGNRNLSNIEMEICRPIIM 179 +PF G+ G +LD+ML +I + R +I+ + PW PP NR+ + E+ + +P + Sbjct: 126 RPFVGRAGQLLDRMLAAIGLSRQSPDPAAAVYITNVLPWRPPQNRDPAPDEIAMMQPFLA 185 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 R +EL +P++++ +GN + + G+W+ P L +HP L++ Sbjct: 186 RHVELAAPELIVLMGNISCQAVLGQRG--ITRLRGQWTEAF----GHPALPMLHPAYLLR 239 Query: 240 YPLIKKNTWHALITLKKALK 259 P K+++W L+ LK L+ Sbjct: 240 TPAAKRDSWADLLALKARLR 259 >gi|307319469|ref|ZP_07598896.1| phage SPO1 DNA polymerase-related protein [Sinorhizobium meliloti AK83] gi|306894841|gb|EFN25600.1| phage SPO1 DNA polymerase-related protein [Sinorhizobium meliloti AK83] Length = 286 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 91/287 (31%), Positives = 140/287 (48%), Gaps = 31/287 (10%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDE-PNNEATYESQRKEKSIDSAIQPITNIRH- 58 M S LS+ ++ + F+A++GV W+ +E P + K + S P T Sbjct: 1 MISANDLSRSELAALLAFHAEAGVEWLLEEEPVDRLAEFEAMKSRRAQSRAVPQTGATAA 60 Query: 59 ---------------------------IHSPLVQQADSIAQKACSLHELKSLLRSFHDCH 91 +++A +A A SL EL++ + +F C+ Sbjct: 61 EPQQSAPPAAARERRPAPPAPPPVVAIPDEQAIKEAQFVADAARSLGELRTAMEAFAGCN 120 Query: 92 LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH 151 L +++ + + A + +MIIG P D+ G+PF+G+ G ML++ML I + R + Sbjct: 121 LRNSARNLVFAEGSAAPGVMIIGPMPYADDDRDGRPFAGRHGEMLERMLSGIGLSREDVL 180 Query: 152 ISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQ 211 ++ PW PPGNR S E +ICRP I RQI L PK LL +GN T FFF + +Q Sbjct: 181 LANAVPWRPPGNRVPSAREADICRPFIERQIALAEPKQLLLLGNFTARFFFG--GETIHQ 238 Query: 212 NLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 G+W L + IPTLAT+HPQ+L+ P+ K+ W L+ K L Sbjct: 239 LRGEWRELTFGGTSIPTLATLHPQDLVAAPINKRFAWLDLLAFKSRL 285 >gi|88608041|ref|YP_506799.1| uracil-DNA glycosylase [Neorickettsia sennetsu str. Miyayama] gi|88600210|gb|ABD45678.1| uracil-DNA glycosylase, family 4 [Neorickettsia sennetsu str. Miyayama] Length = 255 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 19/260 (7%) Query: 8 SQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQA 67 S+ L I FY G+ + + + S Q + A Sbjct: 3 SKSSYLMILKFYDRLGMDTM----------TADISSPNQASITQVGGMPIDMKESAESTA 52 Query: 68 DSIAQKACSLH------ELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121 L ELK+L+ +F C L ++ +T+ +M+IG P + + Sbjct: 53 RKHKTPERDLTYVTTLGELKALVYNFEGCQLKKSAKNTVFCDGNPDAKIMLIGEAPGEQE 112 Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ 181 + G PF G++GN+LDKMLQ+I + RT+++I+ W PPGNR + E+EIC+P + Sbjct: 113 DKLGIPFCGRSGNLLDKMLQAIGLDRTKVYITNAVFWRPPGNRRPTPEEIEICKPFLEHH 172 Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATVHPQELIQ 239 I L+ PK+++ +G+ + + K P I T HP L++ Sbjct: 173 IRLVLPKLIVLLGSTAASSVLK-SQDRISTLRNKLHEYKNPFIREGITTTVMFHPSYLLR 231 Query: 240 YPLIKKNTWHALITLKKALK 259 P KK W L ++ + Sbjct: 232 QPAQKKLAWEDLKLIRSYID 251 >gi|260429553|ref|ZP_05783530.1| uracil-DNA glycosylase [Citreicella sp. SE45] gi|260420176|gb|EEX13429.1| uracil-DNA glycosylase [Citreicella sp. SE45] Length = 263 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 56/268 (20%), Positives = 112/268 (41%), Gaps = 15/268 (5%) Query: 3 SKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSA-------IQPIT 54 + + + G + P + +E + + SA P Sbjct: 1 MDSGMDWHWARAALDWQIELGADEAIGETPVDRFAHEVEAQAARAVSAAPAGGRGATPPI 60 Query: 55 NIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIG 114 + V A A A +L EL++ + ++ C L + + + + +MI+G Sbjct: 61 PVADAGPDPVVVAQEAAAAASTLDELRAAIGAYEHCALKRGARNLVFSDGAPDARVMIVG 120 Query: 115 YTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEI 173 P +++ G+PF G+ G +LD+ML + + R ++I+ + PW PP NR+ E+ + Sbjct: 121 EAPGRDEDLQGRPFVGRAGQLLDRMLAPLGLSRAENVYITNVLPWRPPQNRDPRPDEIAM 180 Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 +P + R I L+ P +L+ +GN + + + G W+ P + H Sbjct: 181 MKPFLARHIALVDPDLLVIMGNISCDALLGRRG--ITRLRGNWAEAE----GRPAMPMFH 234 Query: 234 PQELIQYPLIKKNTWHALITLKKALKNL 261 P L++ P +K+ W ++ + L+ L Sbjct: 235 PAYLLRQPQMKREAWADMLAIGAKLRAL 262 >gi|170750469|ref|YP_001756729.1| phage SPO1 DNA polymerase-related protein [Methylobacterium radiotolerans JCM 2831] gi|170656991|gb|ACB26046.1| phage SPO1 DNA polymerase-related protein [Methylobacterium radiotolerans JCM 2831] Length = 295 Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 71/293 (24%), Positives = 125/293 (42%), Gaps = 36/293 (12%) Query: 2 TSKRILSQEQILTIALFYADSGVYWVFDE-PNNEATYESQRKE----------KSIDSAI 50 +Q ++ F+ ++G DE P++ + ++ + + Sbjct: 1 MPSSTDAQADLIAYLDFHVEAGADAALDEHPHDRFSEADAPAPTLRAPRRAAPRAAEQPV 60 Query: 51 QPITN------------------------IRHIHSPLVQQADSIAQKACSLHELKSLLRS 86 P+ N A + A++A SL EL+ +L Sbjct: 61 SPVANTLVPPPGSAPPAPPAAAPRTFGRAASAQPDEAASDARARARQAKSLDELERILAD 120 Query: 87 FHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM 146 F C L T+ + + A +M +G P ++ GKPF G++G +LDKM++++ + Sbjct: 121 FDACPLRFTAKNLVFADGNPEARVMFLGEAPGADEDRIGKPFMGRSGQLLDKMMKAVGLD 180 Query: 147 RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206 RT +I I PW PPGNRN + E+ +CRP + RQIEL+ P I++ +G Sbjct: 181 RTSAYIGNIVPWRPPGNRNPTPQEVAVCRPFVERQIELVDPDIIVCLGAPATQTLTGTK- 239 Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 + G+ P+ + LAT+HP L++ P+ K+ W +L+ L Sbjct: 240 DGILRTRGRLFPYKLPNREVKLLATLHPAFLLRQPVQKRLAWRDFRSLRALLD 292 >gi|157826560|ref|YP_001495624.1| Uracil-DNA glycosylase [Rickettsia bellii OSU 85-389] gi|157801864|gb|ABV78587.1| Uracil-DNA glycosylase [Rickettsia bellii OSU 85-389] Length = 263 Score = 206 bits (523), Expect = 4e-51, Method: Composition-based stats. Identities = 63/252 (25%), Positives = 121/252 (48%), Gaps = 9/252 (3%) Query: 17 LFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPIT----NIRHIHSPLVQQADSIA 71 + GV Y+ + P ++ + + + P N+ + A S+A Sbjct: 7 KWLNAIGVEYYCSEHPPKLKVSDNTKLAEKPQAKPTPQKENGFNMNDKTHDNISLARSLA 66 Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 KA ++ ELK L +F+ C L + +T+ +M+IG P ++++ G PF G+ Sbjct: 67 DKANNIAELKESLLNFNGCDLKKLATNTVFGDGNPAAKIMLIGEAPGSNEDLKGIPFCGE 126 Query: 132 TGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 +GN+LD ML++I I R +I+ W PP NR + E+++CRP + + I L++PK++ Sbjct: 127 SGNLLDNMLRAIGISRKDNAYITNTVFWRPPANRQPTLEEVDVCRPFVEKHIALVNPKLI 186 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT--LATVHPQELIQYPLIKKNTW 248 + +G+ +A + ++ + P A HP L++ P K+ +W Sbjct: 187 ILVGSTAATSLLGKNA-GITKIRQEYYFYTNKYLAAPIQTTAMFHPAYLLRQPSQKRTSW 245 Query: 249 HALITLKKALKN 260 + L+ +K L++ Sbjct: 246 YDLLKIKDYLES 257 >gi|91206062|ref|YP_538417.1| Uracil-DNA glycosylase [Rickettsia bellii RML369-C] gi|91069606|gb|ABE05328.1| Uracil-DNA glycosylase [Rickettsia bellii RML369-C] Length = 262 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 63/252 (25%), Positives = 121/252 (48%), Gaps = 9/252 (3%) Query: 17 LFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPIT----NIRHIHSPLVQQADSIA 71 + GV Y+ + P ++ + + + P N+ + A S+A Sbjct: 6 KWLNAIGVEYYCSEHPPKLKVSDNTKLAEKPQAKPTPQKENGFNMNDKTHDNISLARSLA 65 Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 KA ++ ELK L +F+ C L + +T+ +M+IG P ++++ G PF G+ Sbjct: 66 DKADNIAELKESLLNFNGCDLKKLATNTVFGDGNPAAKIMLIGEAPGSNEDLKGIPFCGE 125 Query: 132 TGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 +GN+LD ML++I I R +I+ W PP NR + E+++CRP + + I L++PK++ Sbjct: 126 SGNLLDNMLRAIGISRKDNAYITNTVFWRPPANRQPTLEEVDVCRPFVEKHIALVNPKLI 185 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT--LATVHPQELIQYPLIKKNTW 248 + +G+ +A + ++ + P A HP L++ P K+ +W Sbjct: 186 ILVGSTAATSLLGKNA-GITKIRQEYYFYTNKYLAAPIQTTAMFHPAYLLRQPSQKRTSW 244 Query: 249 HALITLKKALKN 260 + L+ +K L++ Sbjct: 245 YDLLKIKDYLES 256 >gi|222056605|ref|YP_002538967.1| phage SPO1 DNA polymerase-related protein [Geobacter sp. FRC-32] gi|221565894|gb|ACM21866.1| phage SPO1 DNA polymerase-related protein [Geobacter sp. FRC-32] Length = 256 Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 103/251 (41%), Gaps = 12/251 (4%) Query: 10 EQILTIALFYADSGVYWV-FDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQAD 68 + +SG+ + + E + + + A V Sbjct: 12 ASLCVYLEDLQESGIDGLAYGESAPAVDHGNDYHSATSPPASVEPAPAEGSPPDPVSAEK 71 Query: 69 SIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128 +L +++ L + C L T + + L+ +G P +++ G+PF Sbjct: 72 E------TLDKVRLDLGNCTRCGLSGTRTNLVFGIGNPAARLVFVGEAPGRDEDLQGEPF 125 Query: 129 SGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188 G+ G +L K++ +++ R+ ++I I PPGNRN E+E C+P ++RQ+ ++P+ Sbjct: 126 VGEAGQLLTKIIGAMQFKRSDVYICNILKCRPPGNRNPQQEEIEQCQPFLLRQLHAVNPE 185 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW 248 ++ +G + + G++ + IP + T HP L++ P +K+ W Sbjct: 186 AIVCLGTFAAQTLLQTK-EPISKLRGRFHDY----HGIPLMPTFHPAFLLRNPAMKREVW 240 Query: 249 HALITLKKALK 259 + + + L Sbjct: 241 EDMQKVMRLLD 251 >gi|300024378|ref|YP_003756989.1| phage SPO1 DNA polymerase-related protein [Hyphomicrobium denitrificans ATCC 51888] gi|299526199|gb|ADJ24668.1| phage SPO1 DNA polymerase-related protein [Hyphomicrobium denitrificans ATCC 51888] Length = 275 Score = 203 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 78/276 (28%), Positives = 118/276 (42%), Gaps = 30/276 (10%) Query: 12 ILTIALFYADSGVYWVFDEPNNEATYESQRKE------KSIDSAIQPITNIRHIHSPLVQ 65 +L + ++ G DE + + D A + V Sbjct: 1 MLALLDWFQAMGADAAVDETSCDWLARGPTPPGAAFAWPRPDDAPARVPPESAPSRRPVS 60 Query: 66 Q-----------------------ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICA 102 Q A IA++A SL L++ L+ F C L +T+ Sbjct: 61 QNPTADVTRPRAATPLGASEAETGARRIAREAQSLEALEAALKGFDGCGLKATATKLCFY 120 Query: 103 TQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG 162 DLMI+G P +++ GKPF G+ G +LDKML +I + + +HI+ I W PPG Sbjct: 121 RGAPAADLMIVGEAPGRDEDLEGKPFVGRAGRLLDKMLAAIGLSESDVHITNIVYWRPPG 180 Query: 163 NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP 222 NR + E CRP + RQIEL++PKI++ +G F A+ + GKW L Sbjct: 181 NRTPTPQEALACRPFLERQIELVAPKIVVAVGGSAAKELFGV-AEGIMRLRGKWRELTVG 239 Query: 223 HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 I LAT+HP L++ P K W L+ ++ L Sbjct: 240 DRKIQALATLHPAYLLRTPAAKNLAWLDLLQIRSKL 275 >gi|86139051|ref|ZP_01057622.1| uracil-DNA glycosylase [Roseobacter sp. MED193] gi|85824282|gb|EAQ44486.1| uracil-DNA glycosylase [Roseobacter sp. MED193] Length = 266 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 62/268 (23%), Positives = 109/268 (40%), Gaps = 18/268 (6%) Query: 3 SKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRH--- 58 + + + + + G + +EP N + + + Sbjct: 1 MESAIDYWSAKALLEWQVELGATEALCEEPVNRYELAAPAPKGRQGQQAGQQPGQKPGMP 60 Query: 59 -------IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLM 111 V +A A A L L++ + + C L + + + A G +M Sbjct: 61 PPVAPKPKPVDPVAEARKAAAAAAELPSLRAAMAEYRHCDLKMGARNLVFADGQPGARVM 120 Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIE 170 +IG P ++ GKPF G G +LD+MLQ+I++ R + +I+ + PW P NR+ S E Sbjct: 121 VIGEAPGRDEDQQGKPFVGAAGQLLDRMLQAIDLGRDKNVYITNVLPWRPQQNRDPSPEE 180 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230 +++ P + R +EL P+IL+ +GN + + G W+ P L Sbjct: 181 IDMMLPFLERHVELAQPEILVLMGNISCQAVLGKRG--ITRLRGTWAEAWGK----PVLP 234 Query: 231 TVHPQELIQYPLIKKNTWHALITLKKAL 258 HP L++ P K+ W L+ LK L Sbjct: 235 MFHPAYLLRQPDQKRAAWADLLELKARL 262 >gi|67459732|ref|YP_247356.1| uracil-DNA glycosylase [Rickettsia felis URRWXCal2] gi|67005265|gb|AAY62191.1| Uracil-DNA glycosylase, family 4 [Rickettsia felis URRWXCal2] Length = 262 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 66/253 (26%), Positives = 122/253 (48%), Gaps = 9/253 (3%) Query: 16 ALFYADSGV-YWVFDEPNNEA----TYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSI 70 + + GV Y+ + P T +++ + + S + N+ + A S+ Sbjct: 5 LKWLSAIGVEYYCLEHPPKLKVCNNTELTEKPQVKLMSTKETAFNMNDKVHDNITLARSL 64 Query: 71 AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130 A KA ++ ELK L +F+ C L + +T+ +M+IG P ++++ G PF G Sbjct: 65 ADKANNIEELKESLLNFNGCELKKFATNTVFGDGNLEAKIMLIGEAPGSTEDLKGIPFCG 124 Query: 131 KTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189 ++GN+LD ML +I I R +I+ W PP NR + E++ICRP + + I LI+PK+ Sbjct: 125 ESGNLLDNMLYAIGISRKNNAYITNTVFWRPPANRQPTLEEVDICRPFVEKHIALINPKL 184 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT--LATVHPQELIQYPLIKKNT 247 ++ +G+ + ++ + P A HP L++ P+ K+ + Sbjct: 185 IILVGSTAATSLLG-KNSGITKIRQEYYFYTNKYLSAPIQTTAIFHPAYLLRQPMQKRTS 243 Query: 248 WHALITLKKALKN 260 W+ L+ +K+ L N Sbjct: 244 WYDLLKIKEYLVN 256 >gi|23014826|ref|ZP_00054624.1| COG1573: Uracil-DNA glycosylase [Magnetospirillum magnetotacticum MS-1] Length = 279 Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 70/266 (26%), Positives = 111/266 (41%), Gaps = 20/266 (7%) Query: 14 TIALFYADSGVYW-VFDEPNNEATYES----------------QRKEKSIDSAIQPITNI 56 I +Y ++GV + +EP + R + T Sbjct: 12 DILRWYLEAGVDESMGEEPVDRYATSRRAVESRAAAAAPAVAPPRHSPRQAEPMAAPTGA 71 Query: 57 RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYT 116 S L A +A L L+ + F L + ST+ +M IG Sbjct: 72 SLSASALPGTAAHLAASCADLQALRHAMEGFEGLPLKQAASSTVFGDGNPEASVMCIGEA 131 Query: 117 PSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP 176 P ++ G PF G +G +LD+ML SI + RT +I+ + PW PP NR + E+ +C P Sbjct: 132 PGQEEDRRGLPFVGPSGKLLDRMLASIGLDRTSCYITNVVPWRPPANRKPTPDEVAVCMP 191 Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATVHP 234 + R IEL+ P++L+ +G A + G+W +P IP LAT HP Sbjct: 192 FLTRHIELVDPQVLILLGGAAAAAV-LAKADGINRLRGQWFEFNSPGLPRPIPALATFHP 250 Query: 235 QELIQYPLIKKNTWHALITLKKALKN 260 L++ P K++ W L+ + K L + Sbjct: 251 AYLLRTPDAKRDAWRDLLMIAKKLAS 276 >gi|114762038|ref|ZP_01441506.1| uracil-DNA glycosylase [Pelagibaca bermudensis HTCC2601] gi|114545062|gb|EAU48065.1| uracil-DNA glycosylase [Roseovarius sp. HTCC2601] Length = 264 Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 61/268 (22%), Positives = 112/268 (41%), Gaps = 16/268 (5%) Query: 3 SKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAI--------QPI 53 L + + G D + E + + +A+ Sbjct: 1 MDSGLDWHYARAALEWQLELGADEAIGDTAVDRFAAEIELQAAREAAAVAQAPARGGAMP 60 Query: 54 TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113 V A A A +L +L+ + +F C L + + + + +MI+ Sbjct: 61 PPKIDEGPDPVAVAQQAAAAAATLDDLREAMAAFEHCELRRGARNLVFSDGVAQARVMIV 120 Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEME 172 G P +++ GKPF G+ G +LD+ML +I + R ++I+ + PW PP NR+ E+ Sbjct: 121 GEAPGRDEDLQGKPFVGRAGQLLDRMLGAIGLSRAENVYITNVLPWRPPQNRDPKPDEIA 180 Query: 173 ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATV 232 + P + R I L++P++L+ +GN + + + GKW+ +P L Sbjct: 181 MLTPFLARHIALVAPEVLVVMGNISCDALLGRRG--ITRLRGKWAEAQ----GLPALPMF 234 Query: 233 HPQELIQYPLIKKNTWHALITLKKALKN 260 HP L++ P +K+ W L+ LK L+ Sbjct: 235 HPAYLLRQPQMKREAWADLLELKAKLRA 262 >gi|332559474|ref|ZP_08413796.1| Phage SPO1 DNA polymerase-related protein [Rhodobacter sphaeroides WS8N] gi|332277186|gb|EGJ22501.1| Phage SPO1 DNA polymerase-related protein [Rhodobacter sphaeroides WS8N] Length = 259 Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 59/250 (23%), Positives = 108/250 (43%), Gaps = 14/250 (5%) Query: 18 FYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRH-IHSPLVQQADSIAQKAC 75 + D G + D P N + +A+ + + V++A A A Sbjct: 15 WQVDLGATEAILDAPVNRYELGDAQPVPKAAAAVAATAALDPVAAADPVEEARRAAAAAP 74 Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 +L L+ + ++ C L + +T+ + LM+IG P ++ +G+PF G+ G + Sbjct: 75 TLEALREAMAAYDHCDLKRGARNTVFSDGHPAARLMLIGEAPGREEDAAGRPFVGRAGQL 134 Query: 136 LDKMLQSIEIMRTQI------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189 LD+M +I + RT +I+ + PW PP NR+ S E+ + P + R +EL +P + Sbjct: 135 LDRMFAAIGLSRTSPDAETALYITNVMPWRPPQNRDPSPEEVAMMTPFLARHVELAAPDL 194 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249 ++ GN + G+W+ P + HP L++ P K+ W Sbjct: 195 IVVTGNTACAALLGRTG--ITRLRGRWAEAW----GRPVMPMCHPAYLLRNPEAKREAWA 248 Query: 250 ALITLKKALK 259 L+ +K L Sbjct: 249 DLLEVKARLA 258 >gi|221640492|ref|YP_002526754.1| Phage SPO1 DNA polymerase-related protein [Rhodobacter sphaeroides KD131] gi|221161273|gb|ACM02253.1| Phage SPO1 DNA polymerase-related protein [Rhodobacter sphaeroides KD131] Length = 260 Score = 201 bits (512), Expect = 7e-50, Method: Composition-based stats. Identities = 60/251 (23%), Positives = 107/251 (42%), Gaps = 15/251 (5%) Query: 18 FYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHI--HSPLVQQADSIAQKA 74 + D G + D P N + +A T + V++A A A Sbjct: 15 WQVDLGATEAILDAPVNRYELGDAQPVPKAAAAAVAATAALDPVAAADPVEEARRAAAAA 74 Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 +L L+ + ++ C L + +T+ + LM+IG P ++ +G+PF G+ G Sbjct: 75 PTLEALREAMAAYDHCDLKRGARNTVFSDGHPAARLMLIGEAPGREEDAAGRPFVGRAGQ 134 Query: 135 MLDKMLQSIEIMRTQI------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188 +LD+M +I + RT +I+ + PW PP NR+ S E+ + P + R +EL +P Sbjct: 135 LLDRMFAAIGLSRTSPDAETALYITNVMPWRPPQNRDPSPEEVAMMTPFLARHVELAAPD 194 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW 248 +++ GN + G+W+ P + HP L++ P K+ W Sbjct: 195 LIVVTGNTACAALLGRTG--ITRLRGRWAEAW----GRPVMPMCHPAYLLRNPEAKREAW 248 Query: 249 HALITLKKALK 259 L+ +K L Sbjct: 249 ADLLEVKARLA 259 >gi|126463421|ref|YP_001044535.1| phage SPO1 DNA polymerase-related protein [Rhodobacter sphaeroides ATCC 17029] gi|126105085|gb|ABN77763.1| phage SPO1 DNA polymerase-related protein [Rhodobacter sphaeroides ATCC 17029] Length = 260 Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats. Identities = 60/251 (23%), Positives = 108/251 (43%), Gaps = 15/251 (5%) Query: 18 FYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHI--HSPLVQQADSIAQKA 74 + D G + D P N + +A T + V++A A A Sbjct: 15 WQVDLGATEAILDAPVNRYELGDAQPVPKAAAAAVAATAALDPVAAADPVEEARRAAAAA 74 Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 +L L+ + ++ C L + +T+ + LM+IG P ++ +G+PF G+ G Sbjct: 75 PTLEALREAMAAYDHCDLKRGARNTVFSDGHPAARLMLIGEAPGREEDAAGRPFVGRAGQ 134 Query: 135 MLDKMLQSIEIMRTQ------IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188 +LD+M +I + RT ++I+ + PW PP NR+ S E+ + P + R +EL +P Sbjct: 135 LLDRMFAAIGLSRTSLDAETALYITNVMPWRPPQNRDPSPEEVAMMTPFLARHVELAAPD 194 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW 248 +++ GN + G+W+ P + HP L++ P K+ W Sbjct: 195 LIVVTGNTACAALLGRTG--ITRLRGRWAEAW----GRPVMPMCHPAYLLRNPEAKREAW 248 Query: 249 HALITLKKALK 259 L+ +K L Sbjct: 249 ADLLEVKARLA 259 >gi|148260066|ref|YP_001234193.1| phage SPO1 DNA polymerase-related protein [Acidiphilium cryptum JF-5] gi|146401747|gb|ABQ30274.1| phage SPO1 DNA polymerase-related protein [Acidiphilium cryptum JF-5] Length = 276 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 69/238 (28%), Positives = 105/238 (44%), Gaps = 10/238 (4%) Query: 21 DSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHEL 80 + G E + S + + + P T +R +P A A SL EL Sbjct: 25 EWGADEALLETPPDRAAASPQHRPASPAPAAPGTVVRLPTAPS-------APGAASLAEL 77 Query: 81 KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML 140 ++ L +F C L T+ + A E +MIIG P ++ G+PF G G +LDKML Sbjct: 78 RAALDAFDQCALKRTATQLVFADGAEDARIMIIGEAPGGEEDRIGRPFVGPAGQLLDKML 137 Query: 141 QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF 200 SI + R + I + PW PPGNR S+ E+ C P + R I L+ P+ L+ +G Sbjct: 138 GSIGLDRGTVRIVNVVPWRPPGNRTPSDTEIAQCLPFLHRHIALVRPERLVLLGAVAVRA 197 Query: 201 FFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 + GKW + + L T HP L++ P K+ W L+ L++ Sbjct: 198 LIGGK-DGITRLRGKWREVTIEGLDQTLRALPTYHPAYLLRQPAAKRLAWADLLELRR 254 >gi|254419584|ref|ZP_05033308.1| uracil-DNA glycosylase, family 4, putative [Brevundimonas sp. BAL3] gi|196185761|gb|EDX80737.1| uracil-DNA glycosylase, family 4, putative [Brevundimonas sp. BAL3] Length = 265 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 58/264 (21%), Positives = 109/264 (41%), Gaps = 8/264 (3%) Query: 2 TSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPI--TNIRH 58 + + + ++ F+ D+GV + D P + K++ A + Sbjct: 1 MNAQPHDIAAVESLLAFWRDAGVDACYGDAPVDHTHLAPPPALKAVQKATASVVMPLAGP 60 Query: 59 IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS-TSLSTICATQTEGQDLMIIGYTP 117 + +A +A A +L +L + + +F C L + ++ +M+IG P Sbjct: 61 SAQDALAEARRLATGASTLQDLAAAVAAFEGCPLRGMGASQSVFGRGNPNAPVMVIGEGP 120 Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177 ++ G+PF G+ G +LD+ML + + ++ I+ W PPGNR + E +C P Sbjct: 121 GADEDRLGQPFVGRAGKLLDRMLAAAGLT-DKVFITNTVFWRPPGNRTPTPQEQAVCAPF 179 Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII--PTLATVHPQ 235 + R L+ PK +L +G + + G+W + P L T+HP Sbjct: 180 VERAFALLQPKAVLLLGAAAAKSVLQTEDGIM-KMRGQWREWRLAEGGVSAPALPTLHPA 238 Query: 236 ELIQYPLIKKNTWHALITLKKALK 259 L++ P K+ W L+ L Sbjct: 239 FLLRQPQAKRQVWADLLAFAAKLD 262 >gi|15893232|ref|NP_360946.1| N-terminus of bacteriophage-type DNA polymerase [Rickettsia conorii str. Malish 7] gi|15620449|gb|AAL03847.1| N-terminus of bacteriophage-type DNA polymerase [Rickettsia conorii str. Malish 7] Length = 279 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 65/253 (25%), Positives = 122/253 (48%), Gaps = 9/253 (3%) Query: 16 ALFYADSGV-YWVFDEPN----NEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSI 70 + + GV Y+ + P T +++ + + S + N+ + A S+ Sbjct: 23 LKWLSAIGVEYYCHEHPPQLKVRNNTELTEKPQVKLMSTKETAFNMNDKVHDNITLARSL 82 Query: 71 AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130 A KA ++ ELK L +F+ C L + +T+ +M+IG P ++++ G PF G Sbjct: 83 ADKANNIEELKESLLNFNGCELKKFATNTVFGDGNLEAKIMLIGEAPGSTEDLKGIPFYG 142 Query: 131 KTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189 ++GN+LD ML +I I R +I+ W PP NR + E++ICRP + + I LI+P++ Sbjct: 143 ESGNLLDNMLHAIGISRKNNAYITNTVFWRPPANRQPTFEEVDICRPFVEKHIALINPQL 202 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT--LATVHPQELIQYPLIKKNT 247 ++ +G+ + ++ + P A HP L++ P+ K+ + Sbjct: 203 IILVGSTAATSLLG-KNSGITKIRQEYYFYTNKYLSAPIQTTAIFHPAYLLRQPMQKRTS 261 Query: 248 WHALITLKKALKN 260 W+ L+ +K+ L N Sbjct: 262 WYDLLKIKEYLVN 274 >gi|34581100|ref|ZP_00142580.1| N-terminus of bacteriophage-type DNA polymerase [Rickettsia sibirica 246] gi|238651090|ref|YP_002916948.1| N-terminus of bacteriophage-type DNA polymerase [Rickettsia peacockii str. Rustic] gi|28262485|gb|EAA25989.1| N-terminus of bacteriophage-type DNA polymerase [Rickettsia sibirica 246] gi|238625188|gb|ACR47894.1| N-terminus of bacteriophage-type DNA polymerase [Rickettsia peacockii str. Rustic] Length = 261 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 65/253 (25%), Positives = 122/253 (48%), Gaps = 9/253 (3%) Query: 16 ALFYADSGV-YWVFDEPN----NEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSI 70 + + GV Y+ + P T +++ + + S + N+ + A S+ Sbjct: 5 LKWLSAIGVEYYCHEHPPQLKVRNNTELTEKPQVKLMSTKETAFNMNDKVHDNITLARSL 64 Query: 71 AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130 A KA ++ ELK L +F+ C L + +T+ +M+IG P ++++ G PF G Sbjct: 65 ADKANNIEELKESLLNFNGCELKKFATNTVFGDGNLEAKIMLIGEAPGSTEDLKGIPFYG 124 Query: 131 KTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189 ++GN+LD ML +I I R +I+ W PP NR + E++ICRP + + I LI+P++ Sbjct: 125 ESGNLLDNMLHAIGISRKNNAYITNTVFWRPPANRQPTFEEVDICRPFVEKHIALINPQL 184 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT--LATVHPQELIQYPLIKKNT 247 ++ +G+ + ++ + P A HP L++ P+ K+ + Sbjct: 185 IILVGSTAATSLLG-KNSGITKIRQEYYFYTNKYLSAPIQTTAIFHPAYLLRQPMQKRTS 243 Query: 248 WHALITLKKALKN 260 W+ L+ +K+ L N Sbjct: 244 WYDLLKIKEYLVN 256 >gi|157829143|ref|YP_001495385.1| N-terminus of bacteriophage-type DNA polymerase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933872|ref|YP_001650661.1| uracil DNA glycosylase superfamily protein [Rickettsia rickettsii str. Iowa] gi|157801624|gb|ABV76877.1| N-terminus of bacteriophage-type DNA polymerase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908959|gb|ABY73255.1| uracil DNA glycosylase superfamily protein [Rickettsia rickettsii str. Iowa] Length = 261 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 65/253 (25%), Positives = 122/253 (48%), Gaps = 9/253 (3%) Query: 16 ALFYADSGV-YWVFDEPN----NEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSI 70 + + GV Y+ + P T +++ + + S + + N+ + A S+ Sbjct: 5 LKWLSAIGVEYYCHEHPPQLKVRNNTELTEKPQVKLMSTKETVFNMNDKVHDNITLARSL 64 Query: 71 AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130 A KA ++ ELK L F+ C L + +T+ +M+IG P ++++ G PF G Sbjct: 65 ADKANNIEELKESLLHFNGCELKKFATNTVFGDGNLEAKIMLIGEAPGSTEDLKGIPFYG 124 Query: 131 KTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189 ++GN+LD ML +I I R +I+ W PP NR + E++ICRP + + I LI+P++ Sbjct: 125 ESGNLLDNMLHAIGISRKNNAYITNTVFWRPPANRQPTFEEVDICRPFVEKHIALINPQL 184 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT--LATVHPQELIQYPLIKKNT 247 ++ +G+ + ++ + P A HP L++ P+ K+ + Sbjct: 185 IILVGSTAATSLLG-KNSGITKIRQEYYFYTNKYLSAPIQTTAIFHPAYLLRQPMQKRTS 243 Query: 248 WHALITLKKALKN 260 W+ L+ +K+ L N Sbjct: 244 WYDLLKIKEYLVN 256 >gi|84500233|ref|ZP_00998499.1| uracil-DNA glycosylase [Oceanicola batsensis HTCC2597] gi|84392167|gb|EAQ04435.1| uracil-DNA glycosylase [Oceanicola batsensis HTCC2597] Length = 257 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 61/265 (23%), Positives = 109/265 (41%), Gaps = 15/265 (5%) Query: 3 SKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPITNIRHIHS 61 + L + + + G D P + + + P +R Sbjct: 1 MESALDWHSAYALLDWQVELGADEAIGDTPVDRFAHVE--PPSAAKRKAAPEQPVRRKEI 58 Query: 62 PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121 V+ A AQ A SL L+ L ++ C L + + + + ++I+G P + Sbjct: 59 DAVEVARQAAQAAGSLDALREALGAYEHCALKRGARNLVFSDGHPAARVLILGEAPDRDE 118 Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMR------TQIHISMISPWHPPGNRNLSNIEMEICR 175 + G+PF G+ G +LD+ML +I++ R ++I+ + PW P NR+ E+ + Sbjct: 119 DREGRPFVGRAGRLLDRMLAAIDLDRTGETPDRAVYITNVLPWRPLQNRDPEPEEIAMML 178 Query: 176 PIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 P + + IEL+ P ++ +GN + G W+ PTL HP Sbjct: 179 PFVQKHIELVDPAFVILMGNIACRAALGKQG--ILRLRGTWTEAF----GRPTLPMTHPT 232 Query: 236 ELIQYPLIKKNTWHALITLKKALKN 260 L+Q P K+ W L++LK L + Sbjct: 233 YLLQQPRAKREAWADLLSLKVRLSS 257 >gi|159045630|ref|YP_001534424.1| uracil-DNA glycosylase [Dinoroseobacter shibae DFL 12] gi|157913390|gb|ABV94823.1| uracil-DNA glycosylase [Dinoroseobacter shibae DFL 12] Length = 265 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 62/268 (23%), Positives = 112/268 (41%), Gaps = 17/268 (6%) Query: 3 SKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHS 61 ++ L + + + G + D P + + K+ +A + Sbjct: 1 MEQELDYHTLRAALEWQVELGATEAISDAPVDRTVAVEPERPKAPAAAPAAPSVAAAPAP 60 Query: 62 PLVQ----QADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117 + A A ++ SL L+ L ++ C L + + + + G +MI+G P Sbjct: 61 DGPEMAVTAARGAAAQSGSLEALRDALAAYPHCELRKGARNLVFSDGRPGARVMILGEAP 120 Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMR------TQIHISMISPWHPPGNRNLSNIEM 171 ++ G+PF G+ G +LDKML +I + R ++I+ I PW PP NR+ E+ Sbjct: 121 GRDEDREGRPFVGRAGQLLDKMLAAIGLARDAPDPGHAVYITNILPWRPPQNRDPRPDEI 180 Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231 + P + R + L P+IL+ +GN + + G+W+ P L Sbjct: 181 AMMMPFVQRHVTLADPEILVLMGNISCQAVLGRKG--ITRLRGQWTEAMDR----PALPM 234 Query: 232 VHPQELIQYPLIKKNTWHALITLKKALK 259 HP L++ P K+ W L+ L+ LK Sbjct: 235 FHPAFLLRQPAQKRAAWADLLDLQARLK 262 >gi|229587212|ref|YP_002845713.1| Uracil-DNA glycosylase, family 4 [Rickettsia africae ESF-5] gi|228022262|gb|ACP53970.1| Uracil-DNA glycosylase, family 4 [Rickettsia africae ESF-5] Length = 279 Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 65/253 (25%), Positives = 121/253 (47%), Gaps = 9/253 (3%) Query: 16 ALFYADSGV-YWVFDEPN----NEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSI 70 + + GV Y+ + P T +++ + + S + N+ + A S+ Sbjct: 23 LKWLSAIGVEYYCHEHPPQLKVRNNTELTEKPQVKLMSTKETAFNMNDKVHDNITLARSL 82 Query: 71 AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130 A KA ++ ELK L +F+ C L + +T+ +M+IG P +++ G PF G Sbjct: 83 ADKADNIEELKESLLNFNGCELKKFATNTVFGDGNLEAKIMLIGEAPGSIEDLKGIPFYG 142 Query: 131 KTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189 ++GN+LD ML +I I R +I+ W PP NR + E++ICRP + + I LI+P++ Sbjct: 143 ESGNLLDNMLHAIGISRKNNAYITNTVFWRPPANRQPTFEEVDICRPFVEKHIALINPQL 202 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT--LATVHPQELIQYPLIKKNT 247 ++ +G+ + ++ + P A HP L++ P+ K+ + Sbjct: 203 IILVGSTAATSLLG-KNSGITKIRQEYYFYTNKYLSAPIQTTAIFHPAYLLRQPMQKRTS 261 Query: 248 WHALITLKKALKN 260 W+ L+ +K+ L N Sbjct: 262 WYDLLKIKEYLVN 274 >gi|149913413|ref|ZP_01901946.1| cytosine deaminase [Roseobacter sp. AzwK-3b] gi|149812533|gb|EDM72362.1| cytosine deaminase [Roseobacter sp. AzwK-3b] Length = 266 Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 59/269 (21%), Positives = 112/269 (41%), Gaps = 18/269 (6%) Query: 3 SKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHS 61 + + + + G + D P N + + + + + Sbjct: 1 MESTFDPHAAKALLDWQIELGATEAIGDLPVNRYELPDTPPAAAAATKPRAAQAVAASVA 60 Query: 62 PLVQQADSIAQKAC-----SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYT 116 P +A +L L+ L + C L + + + A +MIIG Sbjct: 61 PAPAADPLAEARAAAGAAGTLDALREALAGYEHCDLKRGARNLVFADGQPSARVMIIGEA 120 Query: 117 PSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI------HISMISPWHPPGNRNLSNIE 170 P +++ G+PF G+ G +LD+ML++I++ RT +I+ + PW PP NR+ E Sbjct: 121 PGRDEDLQGRPFVGRAGQLLDRMLEAIDMSRTAPEAGQAVYITNVMPWRPPQNRDPKPEE 180 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230 + + P + R ++L+ P+I++ +GN + + G+W+ PTL Sbjct: 181 IAMMLPFVQRHVDLVDPEIVVLMGNISCQAGLGRQG--ITRLRGQWTESY----GRPTLP 234 Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALK 259 VHP L++ P K+ W L+ L+ L+ Sbjct: 235 MVHPAYLLRNPNAKREAWADLLELQARLR 263 >gi|188583952|ref|YP_001927397.1| phage SPO1 DNA polymerase-related protein [Methylobacterium populi BJ001] gi|179347450|gb|ACB82862.1| phage SPO1 DNA polymerase-related protein [Methylobacterium populi BJ001] Length = 309 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 76/301 (25%), Positives = 122/301 (40%), Gaps = 43/301 (14%) Query: 1 MTSKRILS--QEQILTIALFYADSGVYWVFDE---------------------------- 30 MT+ S + +++ F+ ++G+ DE Sbjct: 4 MTANHADSDARADLISYLDFHVEAGIDAALDERPHDRFAEAEAVQAAAPRAEPAPRREPP 63 Query: 31 -----------PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHE 79 P R + A + A + +L E Sbjct: 64 PRREAPPGEDAPLEFRRELPSRDPPPREPPRTYGNAAGAKPGEAADDARARAAQMQTLEE 123 Query: 80 LKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKM 139 L++LLR F C L T+ + + A +M +G P ++ GKPF G++G +LD+M Sbjct: 124 LEALLRGFEGCTLRFTAKNLVFADGNPQARVMFVGEAPGADEDRIGKPFMGRSGQLLDRM 183 Query: 140 LQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199 + +I + RT +IS + PW PPGNRN + E+ ICRP + RQIEL +P IL+ +G Sbjct: 184 MAAIGLDRTSAYISNVVPWRPPGNRNPTPQEISICRPFVERQIELANPDILVCLGAPATQ 243 Query: 200 FFFNNDAQKTYQNLGKWSNLC-TPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 + G++ + I LAT+HP L++ P+ K+ W LK AL Sbjct: 244 TLTGTK-DGILKARGRFYPYRLSDGREIRALATLHPAYLLRQPVQKRLAWRDFRMLKTAL 302 Query: 259 K 259 Sbjct: 303 D 303 >gi|150395871|ref|YP_001326338.1| phage SPO1 DNA polymerase-like protein [Sinorhizobium medicae WSM419] gi|150027386|gb|ABR59503.1| phage SPO1 DNA polymerase-related protein [Sinorhizobium medicae WSM419] Length = 289 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 89/287 (31%), Positives = 138/287 (48%), Gaps = 31/287 (10%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEAT----------------------- 36 M S LS ++ + F+A++GV W+ +EP + Sbjct: 1 MISANDLSPSELAALLAFHAEAGVEWLIEEEPLDRLAEFEAMRMRRTESRAAPQANEMAA 60 Query: 37 ------YESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 E+ +E++ + + +++A +A A SL EL++ + +F C Sbjct: 61 ERRQPVPETTARERAQAAPTARPPVVAIPDEQAIKEAQFVAGAARSLGELRTAMEAFSGC 120 Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150 +L +++ + + A + +MIIG P D+ G PF+G+ G ML++ML I + R + Sbjct: 121 NLRNSARNLVFAEGSAASGVMIIGPMPYADDDRDGHPFAGRHGQMLERMLFGIGLSRDDV 180 Query: 151 HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210 ++ PW PPGNR S E +ICRP I RQIEL PK LL +GN T FFF Sbjct: 181 LLTNTVPWRPPGNRVPSAREADICRPFIERQIELAEPKQLLLLGNFTARFFFGGAEMIH- 239 Query: 211 QNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKA 257 Q G+W L + IP LAT+HPQ+LI P+ K+ W L+ K Sbjct: 240 QLRGEWRELTFAGTSIPALATLHPQDLIAAPINKRFAWLDLLAFKSR 286 >gi|163853643|ref|YP_001641686.1| phage SPO1 DNA polymerase-related protein [Methylobacterium extorquens PA1] gi|163665248|gb|ABY32615.1| phage SPO1 DNA polymerase-related protein [Methylobacterium extorquens PA1] Length = 323 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 77/315 (24%), Positives = 122/315 (38%), Gaps = 57/315 (18%) Query: 1 MTSKRILSQE--QILTIALFYADSGVYWVFDE---------------------PNNEATY 37 MT+ + +++ F+ +GV DE P Sbjct: 4 MTANHADTDARGDLISFLDFHVAAGVDAALDEQPHDRFAEAESVRADAASQAEPATRREP 63 Query: 38 ESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKA----------------------- 74 R+E + P + P + + + Sbjct: 64 LEPRREPLPPRSEPPRRDAPSAEEPPLAFRRELPSRDAPTREPPRTYGNAAGAKPGEAAD 123 Query: 75 ---------CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISG 125 +L EL+ LLR F C L T+ + + A +M +G P ++ G Sbjct: 124 DARARAAQMKTLDELEELLRGFEGCGLRFTAKNLVFADGNPQARVMFVGEAPGADEDRIG 183 Query: 126 KPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELI 185 KPF G++G +LD+M+ +I + RT +IS + PW PPGNRN + E+ ICRP + RQIEL Sbjct: 184 KPFMGRSGQLLDRMMAAIGLDRTSAYISNVVPWRPPGNRNPTPQEISICRPFVERQIELA 243 Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP-HSIIPTLATVHPQELIQYPLIK 244 +P IL+ +G + G++ I LAT+HP L++ P+ K Sbjct: 244 NPDILVCLGAPATQTLTGTK-DGILKARGRFYPYRLGDGREIRALATLHPAYLLRQPVQK 302 Query: 245 KNTWHALITLKKALK 259 + W LK AL Sbjct: 303 RLAWRDFRMLKSALD 317 >gi|114328513|ref|YP_745671.1| uracil DNA glycosylase superfamily protein [Granulibacter bethesdensis CGDNIH1] gi|114316687|gb|ABI62747.1| uracil DNA glycosylase superfamily protein [Granulibacter bethesdensis CGDNIH1] Length = 282 Score = 199 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 70/281 (24%), Positives = 116/281 (41%), Gaps = 33/281 (11%) Query: 11 QILTIALFYADSGVYWVF-DEPNNEATYESQRKEK---------SIDSAIQPITNIRHIH 60 L + G D P + T + + A P + Sbjct: 2 DALAALHLQLEWGADEALGDSPVDRFTIVTAPAQAHSGIAPAELQTVPAAAPHPEPHSVP 61 Query: 61 SPLVQQADSIAQKAC-------------------SLHELKSLLRSFHDCHLCSTSLSTIC 101 VQ+ A A +L L++ + F C L +T+ + Sbjct: 62 VQAVQRPAPFAGTASLLPQQGAARLAADIAAEASTLDALRAAMEQFDACPLKATATQLVF 121 Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH-ISMISPWHP 160 + T LM+IG P ++ +GKPF G +G LD+ML S + R + I+ + PW P Sbjct: 122 SDGTYEAGLMLIGEAPGAEEDRAGKPFVGPSGKFLDRMLASAGMTRERDFVIANLIPWRP 181 Query: 161 PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220 PGNRN + E+ C P ++R I L P++L+ +G + + + GKW+++ Sbjct: 182 PGNRNPTETEILQCLPFLLRHIALARPRMLVCLGGVSAKALTGST-VGIRRLRGKWTDIT 240 Query: 221 TPHS--IIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 P +P L +HP L++ P K+ W ++TL+KAL Sbjct: 241 IPGLDSPLPMLPMLHPAYLLRNPGAKREAWADILTLRKALD 281 >gi|254797255|ref|YP_003082097.1| uracil-DNA glycosylase, family 4 [Neorickettsia risticii str. Illinois] gi|254590499|gb|ACT69861.1| uracil-DNA glycosylase, family 4 [Neorickettsia risticii str. Illinois] Length = 247 Score = 199 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 111/247 (44%), Gaps = 7/247 (2%) Query: 15 IALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKA 74 I FY G+ + + +Q + + + + + Sbjct: 2 ILKFYDRLGIGVTT----ADISSPNQASITRVTGMPIDMKEFTESTACKYKTPERDLTCV 57 Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 +L ELK+L+ +F C L + + +T+ +M+IG P + ++ G PF G++GN Sbjct: 58 TTLDELKTLVSNFEGCQLKNNAKNTVFCDGNPDAKIMLIGEAPGEQEDKLGIPFCGRSGN 117 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 +LDKMLQ+I + RT+++I+ W PPGNR + E+EICRP + I L+ PK+++ +G Sbjct: 118 LLDKMLQAIGLDRTKVYITNAVFWRPPGNRRPTPEEIEICRPFLEHHIRLVLPKLIVLLG 177 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATVHPQELIQYPLIKKNTWHALI 252 + + + K+ P I T HP L++ P KK W L Sbjct: 178 STATSSVLK-SQDRISILRNKFYEYKNPFIREGITTTVMFHPSYLLRQPAQKKLAWEDLK 236 Query: 253 TLKKALK 259 ++ + Sbjct: 237 LIRSYID 243 >gi|254471665|ref|ZP_05085066.1| bacteriophage-type DNA polymerase N-terminal domain protein [Pseudovibrio sp. JE062] gi|211958867|gb|EEA94066.1| bacteriophage-type DNA polymerase N-terminal domain protein [Pseudovibrio sp. JE062] Length = 331 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 70/329 (21%), Positives = 129/329 (39%), Gaps = 71/329 (21%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFD----------------------------EPN 32 M+ + + ++ F + GV + P Sbjct: 1 MSEVPVANAAELEAYLEFLSAVGVDCAMEDAPIDRFAQTQAQMEKQAQARPAPQQNFAPT 60 Query: 33 NEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQK------------------- 73 N + + + ++ P R++ V D + + Sbjct: 61 NSFASPEPTQSQPKNLSVSPAEMARNLRENGVSADDKMKARQILERQRAAKESAVQTVMP 120 Query: 74 -----------------------ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 A SL EL+ +L F C+L T+ + + + + Sbjct: 121 NAADNAVVPNAETVGSARSAASSAQSLDELRKILSGFEGCNLRLTAKNLVFGDGSSKARV 180 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170 M +G P ++I G PF G++G++LD+ML+++ + R+ ++I+ + PW PPGNR + E Sbjct: 181 MFVGEAPGREEDIQGVPFVGRSGHLLDRMLKAVGLDRSNVYIANVVPWRPPGNRTPTPHE 240 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230 EICRP I RQIEL+ P+I++F+G + + GKW + +A Sbjct: 241 TEICRPFIQRQIELVDPEIVVFLGAASAKTLSGAR-DGIRKLRGKWLTYNGEGTQRKAIA 299 Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALK 259 T HP L++ P K+ W ++ ++ L+ Sbjct: 300 TYHPAYLLRSPAEKRYAWRDMLQIRAELE 328 >gi|297183987|gb|ADI20107.1| uracil-DNA glycosylase [uncultured alpha proteobacterium EB080_L06A09] Length = 264 Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 65/270 (24%), Positives = 120/270 (44%), Gaps = 18/270 (6%) Query: 3 SKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSA-----IQPITNI 56 S + + + GV D P N E+ E I+ + + +I Sbjct: 1 MSNSQSFYEAKLALEWQYEFGVDEAISDAPINRYEIETVPPELKINPKSNIAHVSSMPDI 60 Query: 57 RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYT 116 A +A+ +L EL+ + F C L + + + + +M+IG Sbjct: 61 LSSRETASDVAKILAKNCDNLTELRDAIGLFEMCSLKKGAKNLVFSDGPSNSRVMVIGEA 120 Query: 117 PSDSDNISGKPFSGKTGNMLDKMLQSIEIMRT------QIHISMISPWHPPGNRNLSNIE 170 P+ ++ GKPF G G ++DKM Q+I + R I+I+ PW PP +R+ S+ E Sbjct: 121 PTREEDSEGKPFVGAEGELVDKMFQAIGLSRRASDPNDAIYITTAIPWRPPQSRDPSSDE 180 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230 + + P + R IELI+P ++ +GN + N + G+W+ + Sbjct: 181 IAMMVPFLKRHIELINPDFIVLMGNIACSAVLNKVGIN--KFRGEWTEALGK----KIIP 234 Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALKN 260 +HP+ L++ P+ K++ W+ L++LK+ L + Sbjct: 235 MLHPRSLLRDPMRKRDAWNDLLSLKEQLNS 264 >gi|162455919|ref|YP_001618286.1| DNA-directed DNA polymerase [Sorangium cellulosum 'So ce 56'] gi|161166501|emb|CAN97806.1| DNA-directed DNA polymerase [Sorangium cellulosum 'So ce 56'] Length = 215 Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 4/209 (1%) Query: 50 IQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD 109 P D+ ++A L L +R+ C L T+ + + Sbjct: 3 AAPAHRADTAARASATLPDTKEERAARLSLLAEEVRTCQKCPLHEGRTHTVFSRGDPSSE 62 Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI 169 ++ +G P +++ G+PF G G +LDKM+ ++ R +++I I PP NR Sbjct: 63 VVFVGEGPGAEEDLQGQPFVGAAGQLLDKMIAAMGYHRDEVYICNIVKCRPPKNRKPEPA 122 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 EM C P + Q+ LI PK+++ +G ++ + G W IP + Sbjct: 123 EMAACSPYLTAQLALIKPKVIVALGATAVQGLIG-TSEGITKLRGTWKLYK---GSIPIM 178 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKAL 258 T HP L++ P K+ W L + + L Sbjct: 179 PTFHPAYLLRQPSAKREVWSDLKEVMRHL 207 >gi|209966444|ref|YP_002299359.1| uracil-DNA glycosylase, family 4 protein, putative [Rhodospirillum centenum SW] gi|209959910|gb|ACJ00547.1| uracil-DNA glycosylase, family 4 protein, putative [Rhodospirillum centenum SW] Length = 298 Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats. Identities = 68/287 (23%), Positives = 120/287 (41%), Gaps = 40/287 (13%) Query: 14 TIALFYADSGVYWVF-DEPNNEAT---------YESQRKEK------------------- 44 F A+ G D P + E+ R Sbjct: 9 AALRFLAEIGADEAVNDRPTDWTAIAARGRAVGPETDRPSAAVPPRAPGPARPGAARPAA 68 Query: 45 --SIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICA 102 + + + Q A + A A +L ELK+ L +F C L T+ S + A Sbjct: 69 SGPATAGAVSASPPPLGAAESSQTARAAAAAAATLPELKAALAAFEGCALRHTATSLVFA 128 Query: 103 TQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI------HISMIS 156 +M++G P + ++ G+PF G G +LD+ML +I + R +I+ + Sbjct: 129 DGDPAARVMLVGEAPGEQEDRQGRPFVGPAGLLLDRMLAAIGLDRRADTPDRAVYITNVV 188 Query: 157 PWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKW 216 W PPGNR+ ++ E+ C P + R I+L++P +L+F+G + + + G+W Sbjct: 189 NWRPPGNRSPTDGEIAACLPFVQRHIDLVNPAVLVFLGGISAKSLLQRT-EGITRLRGRW 247 Query: 217 SNLCTPH--SIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + +P +P L +HP L++ P K+ W L+ L++ L+ L Sbjct: 248 FDYASPGLSRPLPALPMLHPAYLLRNPAAKREAWKDLLALQERLEAL 294 >gi|157964995|ref|YP_001499819.1| uracil-DNA glycosylase [Rickettsia massiliae MTU5] gi|157844771|gb|ABV85272.1| Uracil-DNA glycosylase, family 4 [Rickettsia massiliae MTU5] Length = 294 Score = 198 bits (502), Expect = 8e-49, Method: Composition-based stats. Identities = 64/253 (25%), Positives = 122/253 (48%), Gaps = 9/253 (3%) Query: 16 ALFYADSGV-YWVFDEP----NNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSI 70 + + GV Y+ + P T +++ + + S + N+ + + S+ Sbjct: 38 LKWLSAIGVEYYCHEHPTQLKVRNNTELTEKPQVKLKSTKETAFNMNDKVHENITLSRSL 97 Query: 71 AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130 A KA ++ ELK L +F+ C L + +T+ +M+IG P ++++ G PF G Sbjct: 98 ADKANNIEELKESLLNFNGCELKKFATNTVFGDGNLEAKIMLIGEAPGSTEDLKGIPFYG 157 Query: 131 KTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189 ++GN+LD ML +I I R +I+ W PP NR + E++ICRP + + I LI+PK+ Sbjct: 158 ESGNLLDNMLHAIGISRKNNAYITNTVFWRPPANRQPTFEEVDICRPFVEKHIALINPKL 217 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT--LATVHPQELIQYPLIKKNT 247 ++ +G+ + ++ + P A HP L++ P+ K+ + Sbjct: 218 IILVGSTAATSLLG-KNSGITKIRQEYYFYTNKYLSAPIQTTAIFHPAYLLRQPMQKRTS 276 Query: 248 WHALITLKKALKN 260 W+ L+ +K+ + N Sbjct: 277 WYDLLKIKEYVVN 289 >gi|85704408|ref|ZP_01035510.1| hypothetical protein ROS217_04999 [Roseovarius sp. 217] gi|85670816|gb|EAQ25675.1| hypothetical protein ROS217_04999 [Roseovarius sp. 217] Length = 264 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 63/267 (23%), Positives = 114/267 (42%), Gaps = 15/267 (5%) Query: 3 SKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAI--QPITNIRHI 59 + L L ++ + G + D P N + + + +P + Sbjct: 1 MESTLRPHDALASLVWQIELGATEAICDAPINRYDLPDKVAKPAAAPKAEGRPAAPVAPE 60 Query: 60 HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSD 119 S V A + A A L++ L ++ C L + + + +MIIG P Sbjct: 61 SSDPVAVARASATAAPDRDALRAALGAYPHCDLKRGARNLVFCDGNPAARVMIIGEAPGR 120 Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMR------TQIHISMISPWHPPGNRNLSNIEMEI 173 +++ G PF G+ G +LD+ML +I + R ++I+ + PW PP NR+ S E+ + Sbjct: 121 DEDLQGLPFVGRAGQLLDRMLAAIGLTRGADAPQEAVYITNVLPWRPPQNRDPSTEEIAM 180 Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 RP + R ++LI+P +++ +GN + + + G W+ P L H Sbjct: 181 MRPFVARHVDLIAPDLIVLMGNISCDAGLGKRG--ITRLRGTWAEAYGK----PALPMFH 234 Query: 234 PQELIQYPLIKKNTWHALITLKKALKN 260 P L++ P K+ W L+ LK L+ Sbjct: 235 PAYLLRTPAAKREAWADLLALKARLRE 261 >gi|16125582|ref|NP_420146.1| phage SPO1 DNA polymerase-like protein [Caulobacter crescentus CB15] gi|221234331|ref|YP_002516767.1| uracil DNA glycosylase superfamily protein [Caulobacter crescentus NA1000] gi|13422678|gb|AAK23314.1| phage SPO1 DNA polymerase-related protein [Caulobacter crescentus CB15] gi|220963503|gb|ACL94859.1| uracil DNA glycosylase superfamily protein [Caulobacter crescentus NA1000] Length = 273 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 67/265 (25%), Positives = 114/265 (43%), Gaps = 14/265 (5%) Query: 7 LSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPITN----IRHIHS 61 + Q + ++ F+AD+GV ++ D P + + P + + S Sbjct: 5 VDQRAVESLLAFWADAGVEALYADAPIDRLAEGAAMLRAKSQPPPPPAPVARPGMAMVRS 64 Query: 62 PLVQQADSIAQK----ACSLHELKSLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYT 116 P + A + A+ L L + + +F C L + + + LMIIG Sbjct: 65 PDIASAVAAAKAAAAACNDLESLAAAIAAFEGCPLKSQGAKQAVFSRGVSDAQLMIIGEG 124 Query: 117 PSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP 176 P ++ G+PF G+ G +LD+ML++ + ++ I+ W PPGNR + E C P Sbjct: 125 PGADEDAQGQPFVGRAGKLLDRMLKAAGLEE-RVFITNTVFWRPPGNRTPTPQEQATCAP 183 Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI--IPTLATVHP 234 + R I L+ PK+LL G + D G+W + +P + T+HP Sbjct: 184 FVERAIALVKPKMLLLAGGASAKAMLKRDEGILT-MRGRWFEWVSEDQSLELPAMPTLHP 242 Query: 235 QELIQYPLIKKNTWHALITLKKALK 259 L++ P KK W L+TL + L Sbjct: 243 AFLLRTPAQKKKAWQDLLTLTERLD 267 >gi|328948441|ref|YP_004365778.1| phage SPO1 DNA polymerase-related protein [Treponema succinifaciens DSM 2489] gi|328448765|gb|AEB14481.1| phage SPO1 DNA polymerase-related protein [Treponema succinifaciens DSM 2489] Length = 289 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 58/234 (24%), Positives = 98/234 (41%), Gaps = 4/234 (1%) Query: 26 WVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLR 85 + + ++ E + K+ + A + A+ + +L + + + Sbjct: 45 EIPEFEDDIEIPEEHEEIKTQEHAQVQPNTFQIPAEQ--NSAEKAPSQGATLESIATKIA 102 Query: 86 SFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI 145 S +C LC +T+ E +M+IG P + ++ +G+PF GK G +LDKML +I + Sbjct: 103 SCKNCILCKARTNTVPGEGVENPYVMVIGEGPGEDEDKTGRPFVGKAGQLLDKMLAAISL 162 Query: 146 MR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204 R T +I+ I PP NR E C + QI ++ PK +L +G + Sbjct: 163 GRTTNCYIANIVKCRPPMNRTPMPDEAHACSGYLQAQIHILKPKYILAMGRTAVQNLLDT 222 Query: 205 DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 GKW + IP LAT HP L++ K+ W L K + Sbjct: 223 QEGINS-LRGKWLEYSLGETKIPLLATYHPSALLRNESFKRPAWEDLKVFKSRI 275 >gi|326402981|ref|YP_004283062.1| uracil-DNA glycosylase [Acidiphilium multivorum AIU301] gi|325049842|dbj|BAJ80180.1| uracil-DNA glycosylase [Acidiphilium multivorum AIU301] Length = 276 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 68/238 (28%), Positives = 104/238 (43%), Gaps = 10/238 (4%) Query: 21 DSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHEL 80 + G E + S+ + + P T +R +P A A S EL Sbjct: 25 EWGADEALLETPPDRAAASRPASPAPAAPSAPGTVVRLPTAPS-------APGAASFAEL 77 Query: 81 KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML 140 ++ L +F C L T+ + A E +MIIG P ++ G+PF G G +LDKML Sbjct: 78 RAALEAFDQCALKRTATQLVFADGAEDARIMIIGEAPGGEEDRIGRPFVGPAGQLLDKML 137 Query: 141 QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF 200 SI + R + I + PW PPGNR S+ E+ C P + R I L+ P+ L+ +G Sbjct: 138 GSIGLDRGTVRIVNVVPWRPPGNRTPSDTEIAQCLPFLHRHIALVRPERLVLLGAVAVRA 197 Query: 201 FFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 + GKW + + L T HP L++ P K+ W L+ L++ Sbjct: 198 LIGGK-DGITRLRGKWREVTIEGLDQTLRALPTYHPAYLLRQPAAKRLAWADLLELRR 254 >gi|283779751|ref|YP_003370506.1| phage SPO1 DNA polymerase-like protein [Pirellula staleyi DSM 6068] gi|283438204|gb|ADB16646.1| phage SPO1 DNA polymerase-related protein [Pirellula staleyi DSM 6068] Length = 292 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 54/289 (18%), Positives = 103/289 (35%), Gaps = 38/289 (13%) Query: 3 SKRILSQEQILTIALFYADSGVYWVFD--------------EPNNEATYESQRKEKSIDS 48 +++++ +L A +GV + + + Sbjct: 1 MDELVTRKLLLQSLESLARAGVDQLQRGVPLGVLPAPAATAARPDSPAASMPLPSPPAAT 60 Query: 49 AIQPITNIRHIHSPLVQQADSIAQKACSLH------------------ELKSLLRSFHDC 90 A +P+ +P + L +LK+ + C Sbjct: 61 ADRPMPTRLAAPTPPPFEPRLAVPATSDLEPVMAKKSAAKSAACASLDDLKAEVAGCKLC 120 Query: 91 -HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQ 149 L T T+ ++I G P ++ +G+PF G+ G +L K++++ R + Sbjct: 121 KELARTRKQTVFGIGNPQPRVVIFGEAPGADEDRTGEPFVGRAGQLLTKIIEACGWKREE 180 Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209 ++I + PP NR E+E CRP RQIEL++P+ ++ +G + Sbjct: 181 VYILNVLKCRPPDNRTPVEEEIENCRPFFERQIELLAPEYIVCVGTVPSQALL-RTKEPV 239 Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 + G++ L T HP L++ P KK W + L K + Sbjct: 240 GRLRGRFHEYN----GRSVLVTYHPSYLLRNPSAKKFVWDDMQMLLKKM 284 >gi|329890553|ref|ZP_08268896.1| uracil-DNA glycosylase [Brevundimonas diminuta ATCC 11568] gi|328845854|gb|EGF95418.1| uracil-DNA glycosylase [Brevundimonas diminuta ATCC 11568] Length = 282 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 62/263 (23%), Positives = 106/263 (40%), Gaps = 7/263 (2%) Query: 2 TSKRILSQEQILTIALFYADSGVYWVFD-EPNNEATYESQRKEK-SIDSAIQPITNIRHI 59 + L + F+ D+GV F+ EP + + + K Sbjct: 14 MNAPSLDMAAAEALFAFWRDAGVDACFEAEPVDRTVFVAPVAAKGPATITPLRAPGAPPS 73 Query: 60 HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS-TSLSTICATQTEGQDLMIIGYTPS 118 +A +A A +L EL + +F C L + + ++ A LMI+G P Sbjct: 74 VDEAAVEARRLAACATTLDELAEAVAAFEGCPLRAMGARQSVFARGNPQGSLMIVGEGPG 133 Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPII 178 +++ G+PF G+ G +LD++L + + I+ W PGNR + E +C P + Sbjct: 134 AEEDVRGQPFVGQAGQLLDRILTAAGL-LDDAFITNTVFWKTPGNRTPTPQEQAVCAPFL 192 Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII--PTLATVHPQE 236 R L+ PK +L +G D + G+W I P +AT+HP Sbjct: 193 ERAAALLKPKAVLLVGAAAAKAVLKTDDGIM-RTRGQWREWRLSEDGIAAPVMATLHPAF 251 Query: 237 LIQYPLIKKNTWHALITLKKALK 259 L++ P K W ++ L L+ Sbjct: 252 LLRQPQAKGLVWKDILDLSARLR 274 >gi|325292366|ref|YP_004278230.1| DNA polymerase bacteriophage-type [Agrobacterium sp. H13-3] gi|325060219|gb|ADY63910.1| putative DNA polymerase bacteriophage-type [Agrobacterium sp. H13-3] Length = 299 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 88/299 (29%), Positives = 133/299 (44%), Gaps = 40/299 (13%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDE-PNNEA------------------------ 35 M + LS ++ + F+AD+GV W+ ++ P + Sbjct: 1 MIAAHDLSPAELAALLHFHADAGVDWLLEDGPVDRFAEFAASRPARPAARQESSAPAHQM 60 Query: 36 --------------TYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELK 81 T + A N+ V A A+ A SL ELK Sbjct: 61 DSGTERRADAPQRQTAGRSAPTRGAPPAPALQQNVAMPDEQAVAAARFAAESARSLSELK 120 Query: 82 SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 L F C+L +++ +T+ +M+IG P D+ G+ F+GKTG +LD+ML Sbjct: 121 IALEGFSGCNLKNSARNTVFTEGDPACAVMVIGPMPDADDDREGQLFAGKTGLLLDRMLA 180 Query: 142 SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 +I + R +I + + PW PPGNR + EM+ICRP I RQI L PK LL +GN T FF Sbjct: 181 AIGLDRARIMLGNVVPWRPPGNRPPTQAEMDICRPFIERQIALAEPKHLLLLGNLTARFF 240 Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 F G+W ++ H ++P LA++HPQEL+ P K W L+ + + Sbjct: 241 FGGTGTIHT-LRGQWRDVAAGHLVLPALASLHPQELLNAPASKSLAWQDLLAFQAKISE 298 >gi|86158792|ref|YP_465577.1| phage SPO1 DNA polymerase-like protein [Anaeromyxobacter dehalogenans 2CP-C] gi|85775303|gb|ABC82140.1| phage SPO1 DNA polymerase-related protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 245 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 50/223 (22%), Positives = 86/223 (38%), Gaps = 5/223 (2%) Query: 36 TYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCST 95 + + A + +L +++ L C L Sbjct: 21 APVGTAPVTTPPPGQDTPPAGTQEATSRPSAAGEKGCGSEALVQVRDALGDCRRCKLAGG 80 Query: 96 SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMI 155 + + +L+ +G P ++ G+PF GK G +L KM+Q++ R Q++I+ + Sbjct: 81 RTTLVFGVGNPHAELVFVGEGPGADEDREGEPFVGKAGQLLTKMIQAMGYQREQVYIANV 140 Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK 215 PPGNRN E+E C P + Q+ I P++++ +G D + G Sbjct: 141 VKCRPPGNRNPEPDEIEACEPFLRAQLAAIRPRVVVALGKFAAQTLL-RDTTPITRLRGG 199 Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 W I + T HP L++ P KK W L + K L Sbjct: 200 WREYE----GIRLMPTFHPAYLLRSPEEKKKAWEDLQLVMKEL 238 >gi|77464581|ref|YP_354085.1| hypothetical protein RSP_1001 [Rhodobacter sphaeroides 2.4.1] gi|77388999|gb|ABA80184.1| hypothetical protein RSP_1001 [Rhodobacter sphaeroides 2.4.1] Length = 260 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 59/250 (23%), Positives = 106/250 (42%), Gaps = 15/250 (6%) Query: 18 FYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLV--QQADSIAQKA 74 + D G + D P N + +A T + ++A A A Sbjct: 15 WQVDLGATEAILDAPVNRYELGDAQPVPKAAAAAVAATAAPDPVAAADPVEEARRAAAAA 74 Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 +L L+ + ++ C L + +T+ + LM+IG P ++ +G+PF G+ G Sbjct: 75 PTLEALREAMAAYDHCDLKRGARNTVFSDGHPAARLMLIGEAPGREEDAAGRPFVGRAGQ 134 Query: 135 MLDKMLQSIEIMRTQI------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188 +LD+M +I + RT +I+ + PW PP NR+ S E+ + P + R +EL +P Sbjct: 135 LLDRMFAAIGLSRTSPDAETALYITNVMPWRPPQNRDPSAEEVAMMTPFLARHVELAAPD 194 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW 248 +++ GN + G+W+ P + HP L++ P K+ W Sbjct: 195 LIVVTGNTACAALLGRTG--ITRLRGRWAEAW----GRPVMPMCHPAYLLRNPEAKREAW 248 Query: 249 HALITLKKAL 258 L+ +K L Sbjct: 249 ADLLEVKARL 258 >gi|108760490|ref|YP_632566.1| uracil-DNA glycosylase [Myxococcus xanthus DK 1622] gi|108464370|gb|ABF89555.1| uracil-DNA glycosylase, family 4 [Myxococcus xanthus DK 1622] Length = 186 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 5/182 (2%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L E++ L C+LCST + + + +L+ +G P +++++ G PF G G++L Sbjct: 2 LDEIRRELGDCQRCNLCSTRKNLVFGSGNPRAELVFVGEGPGENEDLQGVPFVGAAGDLL 61 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 KM+ ++ R ++I + PPGNRN E+ C P + Q+ I PK+++ +G Sbjct: 62 TKMIGAMGYRRDDVYICNVVKCRPPGNRNPEPEEVAACEPFLRAQLAAIQPKVVVALGKF 121 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 D+ + G W I + T HP L++ P K+ W L + K Sbjct: 122 AAQTLL-RDSTPITRLRGNWRTYE----GIQLMPTFHPAYLLRSPAEKRKAWEDLQAVMK 176 Query: 257 AL 258 L Sbjct: 177 VL 178 >gi|144897951|emb|CAM74815.1| Uracil DNA glycosylase [Magnetospirillum gryphiswaldense MSR-1] Length = 250 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 59/192 (30%), Positives = 98/192 (51%), Gaps = 3/192 (1%) Query: 70 IAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129 + K L +L+ + +F L T++ST+ A D+M IG P ++ G PF Sbjct: 57 LGGKVSDLAQLRQAMEAFDALPLKRTAMSTVFADGNPDADIMCIGEAPGQEEDRQGLPFV 116 Query: 130 GKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189 GK+G +LD+ML SI + R ++IS + PW P NR + E+ +C P I R IEL+ PK+ Sbjct: 117 GKSGKLLDRMLASIGLDRGSVYISNVVPWRPVDNRKPTADEVAVCLPFITRHIELVDPKL 176 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP--TLATVHPQELIQYPLIKKNT 247 L+ G + ++ + G+W + +P P + T HP L++ P K+ Sbjct: 177 LILFGGAAASALLG-RSEGINRLRGRWFDYSSPGLPRPVAVMPTFHPAYLLRTPAAKREA 235 Query: 248 WHALITLKKALK 259 W L+ ++K + Sbjct: 236 WRDLLAVRKRID 247 >gi|148264964|ref|YP_001231670.1| phage SPO1 DNA polymerase-related protein [Geobacter uraniireducens Rf4] gi|146398464|gb|ABQ27097.1| phage SPO1 DNA polymerase-related protein [Geobacter uraniireducens Rf4] Length = 259 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 104/249 (41%), Gaps = 8/249 (3%) Query: 10 EQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADS 69 + ++GV + P E S + + +++ Sbjct: 12 ASLRAYLEELQETGVDGL---PFAETAPSSAAGPLKKSAPDSIAFPASAPGMSVKTPSEA 68 Query: 70 IAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129 K +L EL+ L + C L T + + L+ +G P +++ G+PF Sbjct: 69 AGGKGETLEELRLELAACSRCKLGETRTNLVFGVGNPHARLVFVGEAPGRDEDLQGEPFV 128 Query: 130 GKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189 G+ G +L K++++++ R +++I + PP NRN E+E C+P ++RQ++ I P++ Sbjct: 129 GEAGQLLTKIIEAMQFKRNEVYICNVLKCRPPNNRNPQQDEIEQCQPFLLRQLKAIGPEV 188 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249 ++ +G + + G++ + IP + T HP L++ +K+ W Sbjct: 189 IVCLGTFAAQTLL-ETKEPISKMRGRFHDY----HGIPLMPTFHPAYLLRNAGMKREVWS 243 Query: 250 ALITLKKAL 258 + + L Sbjct: 244 DMQQVMNLL 252 >gi|51474012|ref|YP_067769.1| DNA polymerase [Rickettsia typhi str. Wilmington] gi|51460324|gb|AAU04287.1| DNA polymerase, bacteriophage-type [Rickettsia typhi str. Wilmington] Length = 258 Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 63/252 (25%), Positives = 119/252 (47%), Gaps = 6/252 (2%) Query: 14 TIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHS--PLVQQADSIA 71 I + GV + E + + + + T ++ + + S+A Sbjct: 3 DIFKWLNAIGVEYYCYEHTPQKIPNNTELTEKQQVELMHTTEAACNNNVHDNITLSRSLA 62 Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 KA ++ EL+ L +F+ C L + +T+ +M+IG P +++++ G PF G+ Sbjct: 63 DKANNIAELRESLLNFNGCELKKFATNTVFGDGNPQAKIMLIGEAPGNTEDLKGIPFCGE 122 Query: 132 TGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 +GN+LD ML +I I R +I+ + W PP NR + E++ICRP + + I LI+PK+L Sbjct: 123 SGNLLDNMLYAIGISRKNNFYITNMVFWRPPANRQPTLEEVDICRPFVEKHIALINPKLL 182 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT--LATVHPQELIQYPLIKKNTW 248 + +G+ + ++ + P A HP L++ P+ K+ +W Sbjct: 183 ILVGSTAATSLLG-KNSCITKIRQEYYFYTNKYISTPIQTTAIFHPAYLLRQPMQKRTSW 241 Query: 249 HALITLKKALKN 260 + L+ +K+ L N Sbjct: 242 YDLLKIKEYLVN 253 >gi|78223867|ref|YP_385614.1| Phage SPO1 DNA polymerase-related protein [Geobacter metallireducens GS-15] gi|78195122|gb|ABB32889.1| Phage SPO1 DNA polymerase-related protein [Geobacter metallireducens GS-15] Length = 253 Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 102/251 (40%), Gaps = 13/251 (5%) Query: 8 SQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQA 67 + + ++GV + A + + A+ P + QA Sbjct: 7 TIASLRRYLEELKETGVDEI-----PRAAASREEQPVPPPEAVAPASVPASSAPVAEPQA 61 Query: 68 DSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127 + + +L +++ L C L + + L+ IG P +++ G+P Sbjct: 62 ATAGE---TLDDIRRDLGECVRCQLGKQRTNLVFGVGNPRARLVFIGEAPGRDEDLKGEP 118 Query: 128 FSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP 187 F G+ G +L K++Q++ R +++I + PPGNRN + E+ C P ++RQ+ I P Sbjct: 119 FVGEAGQLLTKIIQAMGFARDEVYICNVLKCRPPGNRNPHHDEIVQCAPFMLRQVRAIGP 178 Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247 + ++ +G + G++ + IP + T HP L++YP K+ Sbjct: 179 EAVVALGTFAAQTLLATK-EPISALRGRFHDY----HGIPLMPTFHPAFLVRYPERKREV 233 Query: 248 WHALITLKKAL 258 W + + L Sbjct: 234 WDDMKQVMALL 244 >gi|15604675|ref|NP_221193.1| hypothetical protein RP845 [Rickettsia prowazekii str. Madrid E] gi|3861370|emb|CAA15269.1| unknown [Rickettsia prowazekii] gi|292572506|gb|ADE30421.1| Uracil-DNA glycosylase, family 4 [Rickettsia prowazekii Rp22] Length = 258 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 63/252 (25%), Positives = 122/252 (48%), Gaps = 6/252 (2%) Query: 14 TIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNI--RHIHSPLVQQADSI 70 + + GV Y+ ++ + + + T + + + S+ Sbjct: 3 DMFKWLNAIGVEYYCYEHTPQLKISHNTAITEKKQVKLMHTTEAVFNNNVHDNITLSRSL 62 Query: 71 AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130 A KA ++ EL+ L +F+ C L + +T+ ++M+IG P +++++ G PF G Sbjct: 63 ADKANNIVELRESLLNFNGCELKKFATNTVFGDGNPQANIMLIGEAPGNTEDLKGIPFCG 122 Query: 131 KTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 ++GN+LD ML +I I R +I+ + W PP NR + E++ICRP + + I LI+PK+L Sbjct: 123 ESGNLLDNMLYAIGISRNNFYITNMVFWRPPANRQPTLEEVDICRPFVEKHIALINPKLL 182 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT--LATVHPQELIQYPLIKKNTW 248 + +G+ +A + ++ + P A HP L++ P+ K+ +W Sbjct: 183 ILVGSTAATSLLGKNA-CITKIRQEYYFYTNKYISTPIQTTAIFHPAYLLRQPMQKRTSW 241 Query: 249 HALITLKKALKN 260 + L+ +K+ L N Sbjct: 242 YDLLKIKEYLVN 253 >gi|295689039|ref|YP_003592732.1| phage SPO1 DNA polymerase-like protein [Caulobacter segnis ATCC 21756] gi|295430942|gb|ADG10114.1| phage SPO1 DNA polymerase-related protein [Caulobacter segnis ATCC 21756] Length = 272 Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats. Identities = 67/268 (25%), Positives = 111/268 (41%), Gaps = 13/268 (4%) Query: 3 SKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQ---RKEKSIDSAIQPITNIRH 58 + Q + ++ F+AD+GV + D P + K + + Sbjct: 1 MSPAVDQRAVESLLAFWADAGVEVSYADAPIDRLAEGVAMLRAKSQPPPPPPPTRPGLAA 60 Query: 59 IHSPLV----QQADSIAQKACSLHELKSLLRSFHDCHLC-STSLSTICATQTEGQDLMII 113 + P V A + A L L + + +F C L + + + LMII Sbjct: 61 VRGPDVGAAIAAAKAAAAACQDLDSLAAAIAAFDGCALKTQGAKQAVFSRGVADAPLMII 120 Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173 G P ++ G PF G+ G +LD+ML++ + ++ I+ W PPGNR + E + Sbjct: 121 GEGPGADEDAQGAPFVGRAGKLLDRMLKAAGL-EGRVFITNTVFWRPPGNRTPTPQEQAV 179 Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS--IIPTLAT 231 C P + R I L+ PK+LL G + D G+W + +P + T Sbjct: 180 CAPFVERAIALVKPKMLLLAGGASAKAMLKRDEGILS-MRGRWFEWLSEDKATELPAMPT 238 Query: 232 VHPQELIQYPLIKKNTWHALITLKKALK 259 +HP L++ P KK W L+TL + L Sbjct: 239 LHPAFLLRTPAQKKKAWQDLLTLTERLD 266 >gi|146276280|ref|YP_001166439.1| phage SPO1 DNA polymerase-related protein [Rhodobacter sphaeroides ATCC 17025] gi|145554521|gb|ABP69134.1| phage SPO1 DNA polymerase-related protein [Rhodobacter sphaeroides ATCC 17025] Length = 259 Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 59/249 (23%), Positives = 105/249 (42%), Gaps = 14/249 (5%) Query: 18 FYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACS 76 + D GV + D P N + + + + + A A + Sbjct: 15 WQVDLGVTEAICDAPVNRYELVAAQPVPKATAVAVATVALDPAAAADPVAEARRAAAAAT 74 Query: 77 -LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 L L+ + ++ C L + +T+ LM+IG P ++ +G+PF G+ G + Sbjct: 75 DLGSLREAMAAYEHCDLKRGARNTVFCDGNASARLMLIGEAPGREEDAAGRPFVGRAGQL 134 Query: 136 LDKMLQSIEIMRTQI------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189 LD+M +I I RT +I+ + PW PP NR+ S E+ + P + R +EL +P + Sbjct: 135 LDRMFAAIGIARTSPDPAGALYITNVMPWRPPQNRDPSAEEVAMMTPFLERHVELAAPDL 194 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249 ++ +GN + + G+W+ P + HP L++ P K+ W Sbjct: 195 IVVMGNTACSAVLGRTG--ITRLRGRWAEAW----GRPVMPMCHPAYLLRNPEAKREAWA 248 Query: 250 ALITLKKAL 258 L+ LK L Sbjct: 249 DLLELKARL 257 >gi|218532502|ref|YP_002423318.1| phage SPO1 DNA polymerase-related protein [Methylobacterium chloromethanicum CM4] gi|218524805|gb|ACK85390.1| phage SPO1 DNA polymerase-related protein [Methylobacterium chloromethanicum CM4] Length = 334 Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats. Identities = 80/329 (24%), Positives = 129/329 (39%), Gaps = 71/329 (21%) Query: 1 MTSKRILSQE--QILTIALFYADSGVYWVFDE-PNNEATYE------------------- 38 MT+ + +++ F+ +GV V DE P++ Sbjct: 1 MTANHADTDARGDLISYLDFHVAAGVDAVLDEQPHDRFAEAESVRADAASQAEPATRREP 60 Query: 39 -------------------------SQRKEKSIDSAIQPI----TNIRHIHSPLVQQADS 69 S+ ++ SA +P + +P + + Sbjct: 61 LESRREPLEPRREPLPPRREALEPRSEPPQRDAPSAEEPPLAFRRELPSRDAPAREPPRT 120 Query: 70 IAQKA------------------CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLM 111 A +L EL+ LLR F C L T+ + + A +M Sbjct: 121 YGNAAGAKPGEAADDARARAAQMKTLDELEELLRGFEGCGLRFTAKNLVFADGNPQARVM 180 Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEM 171 +G P ++ GKPF G++G +LD+M+ +I + RT +IS + PW PPGNRN + E+ Sbjct: 181 FVGEAPGADEDRIGKPFMGRSGQLLDRMMAAIGLDRTSAYISNVVPWRPPGNRNPTPQEI 240 Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP-HSIIPTLA 230 ICRP + RQIEL +P IL+ +G + G++ I LA Sbjct: 241 SICRPFVERQIELANPDILVCLGAPATQTLTGTK-DGILKARGRFYPYRLGDGREIRALA 299 Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALK 259 T+HP L++ P+ K+ W LK AL Sbjct: 300 TLHPAYLLRQPVQKRLAWRDFRMLKSALD 328 >gi|251772271|gb|EES52841.1| Uracil-DNA glycosylase, family 4 [Leptospirillum ferrodiazotrophum] Length = 251 Score = 194 bits (493), Expect = 9e-48, Method: Composition-based stats. Identities = 59/259 (22%), Positives = 101/259 (38%), Gaps = 14/259 (5%) Query: 1 MTSKRILS-QEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHI 59 M L E + + ++ P+ E + + S + P Sbjct: 1 MKEGHPLDGPEGLAVYLRYLQETVPDLALPRPSAETGEIRMAGGERVGSPLSPS------ 54 Query: 60 HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSD 119 A S ++ SL L ++ C L ST + LM +G P Sbjct: 55 -----LSAGSSPGESGSLESLAKVVSECRLCVLSSTRTFAVFGEGNPDARLMFVGEGPGA 109 Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIM 179 ++ SG+PF G+ G +L +M+ ++ R ++I+ + PPGNR E C P + Sbjct: 110 DEDASGRPFVGRAGELLTRMIGAMGYRREDVYIANVVKCRPPGNRVPEESERASCLPYLK 169 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 RQI LISPK ++ +G + + + + G+ ++L I + T HP L++ Sbjct: 170 RQIGLISPKAMVLLGQTAAVSLLSRN-EGISRLRGRETSLP-EFPGIRVMPTYHPAYLLR 227 Query: 240 YPLIKKNTWHALITLKKAL 258 P K W L + L Sbjct: 228 NPAAKAQVWEDLQQVMGWL 246 >gi|77919605|ref|YP_357420.1| phage SpO1 DNA polymerase-like protein [Pelobacter carbinolicus DSM 2380] gi|77545688|gb|ABA89250.1| phage SpO1 DNA polymerase-related protein [Pelobacter carbinolicus DSM 2380] Length = 224 Score = 194 bits (493), Expect = 9e-48, Method: Composition-based stats. Identities = 49/216 (22%), Positives = 91/216 (42%), Gaps = 7/216 (3%) Query: 45 SIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQ 104 S + + + Q+A L E+++ L C L + Sbjct: 13 PWPSDADVLPVCPLPSAADGDTSKPCRQEA--LEEVRADLGDCRRCALSKKRKHIVFGGG 70 Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 E L+ +G P ++ G PF G+ G +LD+ML ++ + R +++I + PPGNR Sbjct: 71 NEKARLVFVGEAPGRDEDEQGIPFVGEAGRLLDRMLFAMGLDRDEVYICNVQKCRPPGNR 130 Query: 165 NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS 224 + E+E C P + RQ+ I P++++ +G + + + G W Sbjct: 131 DPLPEEIEACEPFLRRQLAAIRPRVIVTLGRFAAQTLL-REREAISRLRGHWHAYE---- 185 Query: 225 IIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 +P + T HP L++ P K+ W L + L++ Sbjct: 186 GVPLMPTYHPAYLLRNPASKREVWEDLKQVMGRLRD 221 >gi|121997486|ref|YP_001002273.1| phage SPO1 DNA polymerase-like protein [Halorhodospira halophila SL1] gi|121588891|gb|ABM61471.1| phage SPO1 DNA polymerase-related protein [Halorhodospira halophila SL1] Length = 294 Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 52/220 (23%), Positives = 83/220 (37%), Gaps = 5/220 (2%) Query: 43 EKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICA 102 T A + L++ + H C LC T+ Sbjct: 78 SAGGAEPASAPTTAPEPGGAPQAAAPEAGCEDLDWDALEARVAGCHACKLCEGRTQTVFG 137 Query: 103 TQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS--IEIMRTQIHISMISPWHP 160 DL+IIG P ++ G+PF G+ G +LD ML + R ++I I P Sbjct: 138 VGDRQADLVIIGEGPGAEEDRQGEPFVGRAGQLLDAMLAAIDRGRDRGGVYIGNIVKCRP 197 Query: 161 PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220 PGNR+ E+ C P + RQ+EL+ PK ++ +G + G+ + Sbjct: 198 PGNRDPRPDEVAACTPYLRRQLELLEPKAIVALGRVAAQQLL-ETKSPLAKLRGRVHHY- 255 Query: 221 TPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 IP T HP L++ P K W L ++ ++ Sbjct: 256 -GAQSIPVWVTYHPAYLLRSPGEKAKVWQDLKRIRGLVEE 294 >gi|194289838|ref|YP_002005745.1| uracil-DNA glycosylase,phage-related protein [Cupriavidus taiwanensis LMG 19424] gi|193223673|emb|CAQ69680.1| putative uracil-DNA glycosylase,phage-related protein [Cupriavidus taiwanensis LMG 19424] Length = 289 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 52/224 (23%), Positives = 93/224 (41%), Gaps = 6/224 (2%) Query: 34 EATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLC 93 EA ++ + + D + P + VQ A L + + C LC Sbjct: 62 EALPDAAVAQPAADEQVAPEPVPAGPGAADVQGEREAAIATMDWPALDAAVAGCTACGLC 121 Query: 94 STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHI 152 T +T+ + M++G P +++++ G+PF G+ G +LD ML ++ + R + I Sbjct: 122 RTRTNTVFGVGARQAEWMLVGEAPGENEDLQGEPFVGQAGKLLDNMLGALGLARGRNVFI 181 Query: 153 SMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN 212 + + PPGNRN E+ C P + RQI L+ P++++ +G + Sbjct: 182 ANVLKCRPPGNRNPEPEEVAQCEPFLRRQIALVRPRVIVVLGRFAAQSLL-RTTTPIGKL 240 Query: 213 LGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 G IP + T HP L++ K W L ++ Sbjct: 241 RGTVHVYE----GIPVVVTYHPAYLLRTLTDKARAWEDLCLARE 280 >gi|115378583|ref|ZP_01465737.1| phage SPO1 DNA polymerase domain protein [Stigmatella aurantiaca DW4/3-1] gi|310822001|ref|YP_003954359.1| phage spo1 DNA polymerase domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115364411|gb|EAU63492.1| phage SPO1 DNA polymerase domain protein [Stigmatella aurantiaca DW4/3-1] gi|309395073|gb|ADO72532.1| Phage SPO1 DNA polymerase domain protein [Stigmatella aurantiaca DW4/3-1] Length = 323 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 5/201 (2%) Query: 56 IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115 + + + +L +++ L C LC+ + + DL+ +G Sbjct: 118 PQQAPRYPGPLPGVVEGERPTLDQIRRELGDCRRCKLCTGRKNIVFGVGNPRADLVFVGE 177 Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICR 175 P ++++I G PF G G +L KM+Q++ R +I+I + PPGNRN E+ C Sbjct: 178 GPGENEDIQGVPFVGAAGELLTKMIQAMGFSRDEIYICNVVKCRPPGNRNPEADEIAACE 237 Query: 176 PIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 P + Q+ I PK+++ +G D + G+W + + T HP Sbjct: 238 PFLRSQLLAIQPKVIVALGKFAAQTLL-RDTTPITRLRGQWREYQ----GVKLMPTFHPA 292 Query: 236 ELIQYPLIKKNTWHALITLKK 256 L++ P K+ W L + K Sbjct: 293 YLLRSPAEKRKAWEDLQQVMK 313 >gi|322436205|ref|YP_004218417.1| phage SPO1 DNA polymerase-related protein [Acidobacterium sp. MP5ACTX9] gi|321163932|gb|ADW69637.1| phage SPO1 DNA polymerase-related protein [Acidobacterium sp. MP5ACTX9] Length = 290 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 52/289 (17%), Positives = 105/289 (36%), Gaps = 36/289 (12%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKE-----KSIDSAIQPITN 55 M ++ ++ ++ D GVY + +A + + +S+ + Sbjct: 1 MAVEKQAGHAEVRAYLEYFRDMGVYDFYRNGEPQAIEAATMEAVVERVESVRATPVAPVV 60 Query: 56 IRHIHSPLVQQADSIA-----QKACSLHEL--------------------KSLLRSFHDC 90 P V + A K S +L ++ + C Sbjct: 61 AVVETGPSVPATQAAAVGFDIAKPVSFDDLAPLPEVRVAAGDRAAALAVIRADIGDCTRC 120 Query: 91 HL-CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQ 149 L + + LM +G P ++ G PF GK+G +L+ M+ ++ + R Q Sbjct: 121 PLAYGGRRNIVFGDGDAKARLMFVGEGPGADEDEQGLPFVGKSGQLLNNMIGAMGLSREQ 180 Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209 ++I+ I PP NR +E C ++RQ++++ P+ ++ +G + Sbjct: 181 VYIANIVKCRPPANRAPEPVEANTCTQFLVRQMDVVQPEYVVALGATAATYLLGVKQSLA 240 Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 G+W ++ + T HP L++ P K W L + A+ Sbjct: 241 S-LRGRWHDV----RGAKAVVTYHPAFLLRDPRQKGEAWKDLQMVMAAM 284 >gi|167619562|ref|ZP_02388193.1| putative phage-related DNA polymerase [Burkholderia thailandensis Bt4] Length = 263 Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 6/211 (2%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 +P A + + EL++ + C LC +T+ E D Sbjct: 50 EPGVEPAPPDVAAEPAARAPSVAELGWDELRARVADCERCRLCEKRTNTVFGVGDERADW 109 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169 M++G P ++++ G+PF G+ G +LD ML+++ + R ++I+ + PPGNRN Sbjct: 110 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 169 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E+ C P + RQ+ L+ PK+++ +G D G+ +P + Sbjct: 170 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHEYE----GVPVI 224 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 T HP L++ K W L ++ Sbjct: 225 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 255 >gi|297184210|gb|ADI20328.1| uracil-DNA glycosylase [uncultured alpha proteobacterium EB080_L27A02] Length = 264 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 64/261 (24%), Positives = 121/261 (46%), Gaps = 18/261 (6%) Query: 11 QILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSA-----IQPITNIRHIHSPLV 64 + + + GV D P N ++ + I + + + ++ Sbjct: 9 DAKSALEWQYEIGVDETISDLPINRYEIQNIPPKLKISAKSNIAHVAVMPDMLSSKETAS 68 Query: 65 QQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNIS 124 A +A+K +L EL+ + F C L + + + +M+IG +PS ++I Sbjct: 69 SVAKMLAEKCNNLSELRDAMGLFEMCSLKKGAKKLVFSDGLSKSRVMVIGESPSREEDIE 128 Query: 125 GKPFSGKTGNMLDKMLQSIEIMRTQI------HISMISPWHPPGNRNLSNIEMEICRPII 178 GKPF G G ++DKM Q+I + R +I+ PW PP +R+ ++ E+ + P + Sbjct: 129 GKPFVGTEGELVDKMFQAIGLSRDSNEPNEAIYITTAIPWRPPQSRDPNSDEIAMMLPFL 188 Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238 R IEL++P ++ +GN + N + G+W+ L +HP+ L+ Sbjct: 189 KRHIELVNPDFIVLMGNIACSAVLNKVGIN--KFRGEWTEAFGK----QILPMLHPRSLL 242 Query: 239 QYPLIKKNTWHALITLKKALK 259 + P+ K++TW+ L++LK+ LK Sbjct: 243 KDPMRKRDTWNDLLSLKERLK 263 >gi|291287466|ref|YP_003504282.1| phage SPO1 DNA polymerase-related protein [Denitrovibrio acetiphilus DSM 12809] gi|290884626|gb|ADD68326.1| phage SPO1 DNA polymerase-related protein [Denitrovibrio acetiphilus DSM 12809] Length = 210 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 6/191 (3%) Query: 67 ADSIAQKACS-LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISG 125 A QK + L + + C L T L+ + DLM +G P ++ G Sbjct: 20 AQECEQKPENPFEALYKEVSTCKKCRLHETRLNIVFGVGDPAADLMFVGEGPGAEEDKQG 79 Query: 126 KPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELI 185 PF G+ G +L KM++++ R ++I+ I PP NRN E C P + RQIE + Sbjct: 80 IPFVGRAGQLLTKMIEAMGFTRDTVYIANIVKCRPPENRNPFEDESNTCIPYLYRQIEYV 139 Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK 245 PK+++ +G+ F + G++ L + + T HP L++ P +KK Sbjct: 140 KPKVIVCLGSVAAQNFLKTKL-GITKIRGEFVELN----GVKVMPTYHPAYLLRNPKMKK 194 Query: 246 NTWHALITLKK 256 W L + Sbjct: 195 PCWEDLQKVMA 205 >gi|291279806|ref|YP_003496641.1| uracil-DNA glycosylase [Deferribacter desulfuricans SSM1] gi|290754508|dbj|BAI80885.1| uracil-DNA glycosylase [Deferribacter desulfuricans SSM1] Length = 207 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 5/177 (2%) Query: 82 SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 + ++ + C L + + +LM +G P ++ G+PF G+ G +L KM++ Sbjct: 33 NEVKDCNKCRLAKNRTNLVFGEGDPNAELMFVGEGPGAEEDKQGRPFVGRAGQLLTKMIE 92 Query: 142 SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 ++++ R ++I+ I PP NR N E+ C P + +QIE+I PK ++ +G+ + Sbjct: 93 AMKLKREDVYIANIVKCRPPNNRAPLNDEIGACIPYLHKQIEIIKPKYIICLGSIAASAL 152 Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 N + G + I + T HP L++ P +KK W L + K + Sbjct: 153 LN-TTTAISKIRGSFREF----KGIKVMPTFHPAYLLRNPKMKKLAWEDLQLVMKEM 204 >gi|114771330|ref|ZP_01448750.1| hypothetical protein OM2255_08235 [alpha proteobacterium HTCC2255] gi|114548255|gb|EAU51142.1| hypothetical protein OM2255_08235 [alpha proteobacterium HTCC2255] Length = 264 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 64/261 (24%), Positives = 121/261 (46%), Gaps = 18/261 (6%) Query: 11 QILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSA-----IQPITNIRHIHSPLV 64 + + + GV D P N ++ + I + + + ++ Sbjct: 9 DAKSALEWQYEIGVDETISDLPINRYEIQNIPPKLKISAKSNIAHVAVMPDMLSSKETAS 68 Query: 65 QQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNIS 124 A +A+K +L EL+ + F C L + + + +M+IG +PS ++I Sbjct: 69 SVAKMLAEKCNNLSELRDAMGLFEMCSLKKGAKKLVFSDGLSKSRVMVIGESPSREEDIE 128 Query: 125 GKPFSGKTGNMLDKMLQSIEIMRTQI------HISMISPWHPPGNRNLSNIEMEICRPII 178 GKPF G G ++DKM Q+I + R +I+ PW PP +R+ ++ E+ + P + Sbjct: 129 GKPFVGTEGELVDKMFQAIGLSRDSNEPNEAIYITTAIPWRPPQSRDPNSDEIAMMLPFL 188 Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238 R IEL++P ++ +GN + N + G+W+ L +HP+ L+ Sbjct: 189 KRHIELVNPDFIVLMGNIACSAVLNKVGIN--KFRGEWTEAFGK----QILPMLHPRSLL 242 Query: 239 QYPLIKKNTWHALITLKKALK 259 + P+ K++TW+ L++LK+ LK Sbjct: 243 KDPIRKRDTWNDLLSLKERLK 263 >gi|83721489|ref|YP_442527.1| phage SPO1 DNA polymerase domain-containing protein [Burkholderia thailandensis E264] gi|257138735|ref|ZP_05586997.1| phage SPO1 DNA polymerase domain-containing protein [Burkholderia thailandensis E264] gi|83655314|gb|ABC39377.1| phage SPO1 DNA polymerase domain protein [Burkholderia thailandensis E264] Length = 433 Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 6/211 (2%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 +P A + + EL++ + C LC +T+ E D Sbjct: 220 EPGVEPAPPDVAAEPAARAPSVAELGWDELRARVADCERCRLCEKRTNTVFGVGDERADW 279 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169 M++G P ++++ G+PF G+ G +LD ML+++ + R ++I+ + PPGNRN Sbjct: 280 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 339 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E+ C P + RQ+ L+ PK+++ +G D G+ +P + Sbjct: 340 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHEYE----GVPVI 394 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 T HP L++ K W L ++ Sbjct: 395 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 425 >gi|153004366|ref|YP_001378691.1| phage SPO1 DNA polymerase-like protein [Anaeromyxobacter sp. Fw109-5] gi|152027939|gb|ABS25707.1| phage SPO1 DNA polymerase-related protein [Anaeromyxobacter sp. Fw109-5] Length = 255 Score = 192 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 55/228 (24%), Positives = 92/228 (40%), Gaps = 5/228 (2%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P + + A+ + P + +L L+ L C Sbjct: 26 PARGGAPAAGPSAERAAPALATPARVGPDAPPGGYTTADKGCGSPALLGLRGELGECTRC 85 Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150 L T + + +LM +G P ++ G+PF GK G +L KM++++ R + Sbjct: 86 KLAGTRTHVVFGVGSPAAELMFVGEGPGADEDQQGEPFVGKAGQLLTKMIEAMGFRREDV 145 Query: 151 HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210 +I+ + PPGNRN E+ C P + QI ISPK+++ +G D Sbjct: 146 YIANVVKCRPPGNRNPEPDELAACEPFLRAQIAAISPKVIVALGKFAAQTLL-RDTTPIS 204 Query: 211 QNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 + G+WS+ + + T HP L++ P KK W L + K L Sbjct: 205 KLRGRWSSYE----GVKLMPTFHPAYLLRSPEEKKKAWEDLQLVMKEL 248 >gi|95929443|ref|ZP_01312186.1| phage SPO1 DNA polymerase-related protein [Desulfuromonas acetoxidans DSM 684] gi|95134559|gb|EAT16215.1| phage SPO1 DNA polymerase-related protein [Desulfuromonas acetoxidans DSM 684] Length = 243 Score = 192 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 42/188 (22%), Positives = 82/188 (43%), Gaps = 5/188 (2%) Query: 73 KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 + SL E++ L C L S + + +L+ +G P ++ G PF G+ Sbjct: 57 RPPSLEEIRQELGDCQRCGLAQGRKSIVFGSGNPHAELVFVGEGPGRDEDEQGVPFVGEA 116 Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192 G +L+++L ++ + R Q++I + PP NRN E+ C P + +Q+ + P++++ Sbjct: 117 GRLLERILFAMGLDREQVYICNVVKCRPPQNRNPQPDEIAACEPFLKQQLASLKPRVIVA 176 Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 +G + G W+ I + T HP L++ P K++ W + Sbjct: 177 LGKFAAQTLLQQQT-PISRLRGNWAAYQ----GIALMPTYHPAYLLRNPAGKRDVWEDMK 231 Query: 253 TLKKALKN 260 + L Sbjct: 232 AVMSRLAQ 239 >gi|258593155|emb|CBE69469.1| protein of unknown function [NC10 bacterium 'Dutch sediment'] Length = 244 Score = 192 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 43/200 (21%), Positives = 90/200 (45%), Gaps = 5/200 (2%) Query: 62 PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121 ++A+ + + + +L +++ + C L + L+ +G P + Sbjct: 37 AWPERAEGLPEPSPTLTKVRETVGECTRCKLHKDRKHIVFGIGNPKAWLVFVGEAPGADE 96 Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ 181 + G+PF G+ G +L ++++++++ R Q++I I PP NRN E+ C P ++ Q Sbjct: 97 DEQGEPFVGRAGQLLTRIIEAMKLTREQVYICNIVKCRPPANRNPEPDEIAACEPFLVAQ 156 Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241 ++ I PK++ +G + + G++ + I L T HP L++ P Sbjct: 157 LQAIRPKLICALGTFAAQTLL-RTREPISKLRGRFHDY----HGILVLPTFHPAYLLRNP 211 Query: 242 LIKKNTWHALITLKKALKNL 261 KK W + L + + L Sbjct: 212 HEKKTVWEDMKLLMREYEQL 231 >gi|293603947|ref|ZP_06686361.1| family 4 uracil-DNA glycosylase [Achromobacter piechaudii ATCC 43553] gi|292817640|gb|EFF76707.1| family 4 uracil-DNA glycosylase [Achromobacter piechaudii ATCC 43553] Length = 329 Score = 192 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 5/219 (2%) Query: 37 YESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTS 96 + + + +P + A+++ +L EL+ + + C LC Sbjct: 109 ASILNRTGPPPRPVPKTAEEEAVEAPRIPVAEAVKNA--NLDELREQVVACTACGLCQGR 166 Query: 97 LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMI 155 + +++G P + ++ G PF G++G +LD ML ++ + R I+ + Sbjct: 167 RHAVFGHGATPTRWLVVGEAPGEQEDRQGHPFVGRSGQLLDAMLAAVGMSRDTDVFITNV 226 Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK 215 PPGNRN E+ C P +MRQI L+ P+ +L +G DA G+ Sbjct: 227 IKCRPPGNRNPKPEEIASCSPYLMRQIALLKPERILVLGRFAAQTLLGTDATIGS-LRGR 285 Query: 216 WSNLCTPHSI-IPTLATVHPQELIQYPLIKKNTWHALIT 253 L T IP + + HP L++ P K W L Sbjct: 286 VHTLKTEDGSEIPLIVSYHPAYLLRSPSEKARAWQDLKL 324 >gi|239948113|ref|ZP_04699866.1| uracil-DNA glycosylase, family 4 [Rickettsia endosymbiont of Ixodes scapularis] gi|239922389|gb|EER22413.1| uracil-DNA glycosylase, family 4 [Rickettsia endosymbiont of Ixodes scapularis] Length = 304 Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats. Identities = 59/202 (29%), Positives = 103/202 (50%), Gaps = 4/202 (1%) Query: 62 PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121 + A S+A KA ++ ELK L +F+ C L + +T+ +M+IG P + Sbjct: 99 DNITLARSLADKANNIEELKESLLNFNGCELKKFATNTVFGDGNLEAKIMLIGEAPGSIE 158 Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMR 180 ++ G PF G++GN+LD ML +I I R +I+ W PP NR + E++ICRP + + Sbjct: 159 DLKGIPFCGESGNLLDNMLHAIGISRKNNAYITNTVFWRPPANRQPTLEEVDICRPFVEK 218 Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT--LATVHPQELI 238 I LI+PK+++ +G+ + ++ + P A HP L+ Sbjct: 219 HIALINPKLIILVGSTAATSLLG-KNSGITKIRQEYYFYTNKYLSAPIQTTAIFHPAYLL 277 Query: 239 QYPLIKKNTWHALITLKKALKN 260 + P+ K+ +W+ L+ +K+ L N Sbjct: 278 RQPMQKRTSWYDLLKIKEYLVN 299 >gi|84515828|ref|ZP_01003189.1| hypothetical protein SKA53_14301 [Loktanella vestfoldensis SKA53] gi|84510270|gb|EAQ06726.1| hypothetical protein SKA53_14301 [Loktanella vestfoldensis SKA53] Length = 257 Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats. Identities = 64/253 (25%), Positives = 107/253 (42%), Gaps = 15/253 (5%) Query: 14 TIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQ 72 + + GV + D P + + + + + P R + V A + A Sbjct: 12 AALEWQVELGVTDAILDAPVDRYALDPVPVRAAPVADVPPPAIAREL--DPVAIARAAAA 69 Query: 73 KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 A L L + + +F C + + + + A G +MI+G P ++ +GKPF G+ Sbjct: 70 AAPDLPALAAAMAAFEHCEIKRGARNAVFADGQPGARVMIVGEAPGREEDRAGKPFVGQA 129 Query: 133 GNMLDKMLQSIEIMRTQI------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186 G MLD+ML +I++ R +I+ + PW PP NR E+ + P + R I L Sbjct: 130 GQMLDRMLAAIDLGRAHENTDRAVYITNVMPWRPPSNRTPDADEIAMMLPFLERHIALAD 189 Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKN 246 P+I++ +GN G W+ + P L HP L++ P K+ Sbjct: 190 PQIIVLMGNTPCQALLGQTG--ITALRGTWTEVLGK----PCLPMFHPAYLLRNPAAKRE 243 Query: 247 TWHALITLKKALK 259 W L+TL LK Sbjct: 244 AWADLLTLNARLK 256 >gi|281358066|ref|ZP_06244550.1| phage SPO1 DNA polymerase-related protein [Victivallis vadensis ATCC BAA-548] gi|281315439|gb|EFA99468.1| phage SPO1 DNA polymerase-related protein [Victivallis vadensis ATCC BAA-548] Length = 292 Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats. Identities = 53/180 (29%), Positives = 82/180 (45%), Gaps = 5/180 (2%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L EL+ L + +C L + + LM IG P +++ G+PF G G +L Sbjct: 106 LDELRQLALACRNCPLAQGRHTVVFGEGNPEARLMFIGEGPGYQEDMQGRPFVGPAGQLL 165 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 KM+Q+++ R +++I+ I PP NRN E C + RQIEL+ P+ ++ +G Sbjct: 166 TKMIQAMQFTREEVYIANIVKCRPPNNRNPEPDEAFACIGYLKRQIELVQPEAIVLLGAV 225 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 F + GKW IP + T HP L++ P KK W L + K Sbjct: 226 AVRFLLERPGGIM-RLRGKWLGYN----GIPVMPTFHPSYLLRDPSGKKLAWADLQMVMK 280 >gi|225872285|ref|YP_002753740.1| uracil-DNA glycosylase, family 4 [Acidobacterium capsulatum ATCC 51196] gi|225793303|gb|ACO33393.1| uracil-DNA glycosylase, family 4 [Acidobacterium capsulatum ATCC 51196] Length = 301 Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats. Identities = 52/278 (18%), Positives = 98/278 (35%), Gaps = 34/278 (12%) Query: 10 EQILTIALFYADSGVYWVFDE---------PNNEATYESQRKEKSIDSAIQPITNIRHIH 60 + +Y D GVY V+ + + + +S QP + Sbjct: 11 ASLQARLRYYRDLGVYDVYRRGEPLAPAELAALLPSVAAPSPQPDPESTPQPAVSASPSV 70 Query: 61 S-------------------PLVQQADSIAQKACSLHELKSLLRSFHDCHLC-STSLSTI 100 + P AQ+ +L L+ + C L + Sbjct: 71 TVTRTEREEPALPPTVPHFMPSDSPIVPAAQRPEALRVLREEIGDCTRCQLAFEGRHKIV 130 Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160 LM +G P ++ G PF G+ G +L+ M+ ++ + R+Q++I+ I P Sbjct: 131 FGDGDPSARLMFVGEGPGADEDAQGLPFVGRAGQLLNNMIGAMGLERSQVYIANIVKCRP 190 Query: 161 PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220 P NR E C + RQ++++ P++++ +G+ + + G+ Sbjct: 191 PQNRVPEPDEANTCTQFLFRQMQIVRPEMIVALGSTAATYLLGAKSPLKA-LRGRIHQA- 248 Query: 221 TPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 + T HP L++ P KK W L + L Sbjct: 249 ---HGSKLIVTYHPAYLLRDPNQKKEAWADLQIAMREL 283 >gi|317401956|gb|EFV82558.1| uracil-DNA glycosylase, family 4 [Achromobacter xylosoxidans C54] Length = 192 Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats. Identities = 53/190 (27%), Positives = 88/190 (46%), Gaps = 3/190 (1%) Query: 71 AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130 A K +L EL+ + + C LCS + + +++G P + ++ G+PF G Sbjct: 4 AVKNANLDELREQVVACTACGLCSGRRHAVFGHGGQPTRWLVVGEAPGEQEDRQGQPFVG 63 Query: 131 KTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189 ++G +LD ML ++ + R + I+ + PPGNRN E+ C P +MRQI L+ P+ Sbjct: 64 RSGQLLDSMLSAVGMSRERDVFIANVIKCRPPGNRNPKPEEIAACSPYLMRQIALLKPER 123 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP-HSIIPTLATVHPQELIQYPLIKKNTW 248 +L +G DA G+ + T IP + + HP L++ P K W Sbjct: 124 ILVLGRFAAQTLLGTDATIGS-LRGRVHQMKTEEGREIPVIVSYHPAYLLRSPAEKARAW 182 Query: 249 HALITLKKAL 258 L + L Sbjct: 183 QDLKLAARQL 192 >gi|167581451|ref|ZP_02374325.1| phage SPO1 DNA polymerase domain protein [Burkholderia thailandensis TXDOH] Length = 237 Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 6/211 (2%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 +P A + + EL++ + C LC +T+ E D Sbjct: 24 EPGFEPAPPDVAAEPAARAPSVAELGWDELRARVADCERCRLCEKRTNTVFGVGDERADW 83 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169 M++G P ++++ G+PF G+ G +LD ML+++ + R ++I+ + PPGNRN Sbjct: 84 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 143 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E+ C P + RQ+ L+ PK+++ +G D G+ +P + Sbjct: 144 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHEYE----GVPVI 198 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 T HP L++ K W L ++ Sbjct: 199 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 229 >gi|241662909|ref|YP_002981269.1| phage SPO1 DNA polymerase-like protein [Ralstonia pickettii 12D] gi|309782169|ref|ZP_07676899.1| arginine biosynthesis protein ArgJ [Ralstonia sp. 5_7_47FAA] gi|240864936|gb|ACS62597.1| phage SPO1 DNA polymerase-related protein [Ralstonia pickettii 12D] gi|308919235|gb|EFP64902.1| arginine biosynthesis protein ArgJ [Ralstonia sp. 5_7_47FAA] Length = 264 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 8/238 (3%) Query: 24 VYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSL 83 V EP + + +A IA A +L++ Sbjct: 30 VEVAAAEPVAVEVEADSFVAAESVPVRGEPPVMHALSDTAAPRAQRIA--AFDWAQLEAA 87 Query: 84 LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143 + + C LC +T+ + M+IG P + ++ G+PF G+ G +LD ML+SI Sbjct: 88 VSNCTSCKLCERRTNTVFGVGDREAEWMLIGEAPGEQEDKQGEPFVGQAGKLLDSMLRSI 147 Query: 144 EIMRTQ-IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202 + R + + I+ + PPGNR+ E +C P + RQI L+ P+I++ +G Sbjct: 148 GLSREKGVFIANVLKCRPPGNRDPEPDEAAMCDPYLKRQIALVKPRIIVVLGRIAAQNLL 207 Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 + GK + +P + T HP L++ K W L +K Sbjct: 208 Q-TQTPVGKLRGKVHEVE----GVPVVVTYHPAYLLRTLTDKARAWEDLCLARKIYAE 260 >gi|260893068|ref|YP_003239165.1| phage SPO1 DNA polymerase-related protein [Ammonifex degensii KC4] gi|260865209|gb|ACX52315.1| phage SPO1 DNA polymerase-related protein [Ammonifex degensii KC4] Length = 210 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 4/185 (2%) Query: 74 ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 +L EL++++++ C L + + + LM IG P ++ G+PF G G Sbjct: 22 PQTLEELEAVVKNCRKCPLAAGRTNVVFGEGNPHALLMFIGEGPGAEEDRQGRPFVGPAG 81 Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 +LD++L + I R +++I+ I PPGNR + E E C P + RQIELI PKI++ + Sbjct: 82 QLLDRILAACGIKREEVYIANIVKCRPPGNRVPTKEEAEACLPYLRRQIELIRPKIIVLL 141 Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253 G + + + G+W P + T HP L++ K+ W Sbjct: 142 GATALQYLVG-SGARITKIRGQWL---GPLYGAQIMPTYHPAALLRDASKKRPAWEDFKK 197 Query: 254 LKKAL 258 ++ A Sbjct: 198 VRDAY 202 >gi|71907612|ref|YP_285199.1| Phage SPO1 DNA polymerase-related protein [Dechloromonas aromatica RCB] gi|71847233|gb|AAZ46729.1| Phage SPO1 DNA polymerase-related protein [Dechloromonas aromatica RCB] Length = 260 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 66/261 (25%), Positives = 105/261 (40%), Gaps = 18/261 (6%) Query: 7 LSQEQILTIALFYADSGVY--WVFD--EPNNEATYESQRKEKSIDSAIQPITNIRHIHSP 62 LS+EQ+L + G+ WV P A S + E + Q Sbjct: 3 LSREQMLA------EMGISPIWVLRDVAPPASAIESSPQMEAEAVTPPQVAEVPSAPIPA 56 Query: 63 LVQQADSIAQKACSLH--ELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120 S A +L L + C LC + + + IG P Sbjct: 57 QTPPPRSTAAAVDTLDWPALARQVAECRACSLCEQRKQAVLGVGDTNPEWLFIGEGPGAE 116 Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIM 179 +++ G+PF G+ G +LD ML S++I R +++I+ PPGNR EM C P + Sbjct: 117 EDVKGEPFVGQAGKLLDNMLASLDIARGNRVYIANAVKCRPPGNRTPDAAEMAACWPYLE 176 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 RQI L+ PK+++ +G + ++D GK L IP + T HP L++ Sbjct: 177 RQIALLKPKVIVLLGKAAVHAVLHDDKSLAS-LRGKRFELA----GIPVVVTYHPAYLLR 231 Query: 240 YPLIKKNTWHALITLKKALKN 260 K W L+ ++ L+ Sbjct: 232 NLPDKAKAWEDLLFARRTLRE 252 >gi|149174697|ref|ZP_01853322.1| DNA polymerase, bacteriophage-type [Planctomyces maris DSM 8797] gi|148846391|gb|EDL60729.1| DNA polymerase, bacteriophage-type [Planctomyces maris DSM 8797] Length = 295 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 58/281 (20%), Positives = 104/281 (37%), Gaps = 38/281 (13%) Query: 4 KRILSQEQILTIALFYADSGV--------------------YWVFDEPNNEATYESQRKE 43 + SQ + + + SGV ++P + Sbjct: 5 AKTRSQRAVRQLLESWQRSGVTYLRQMEPLPELPAETTSPVEAPQEKPVQTVAPTTPLPR 64 Query: 44 KSIDSAIQPITNIRHIHSPLVQQADSIA------------QKACSLHELKSLLRSFHDCH 91 +SI QP Q ++ + L L + + C Sbjct: 65 QSIVPPPQPTETSEEPTLESEQARKEMSVPRTTKSKMNKGDRQAELDILATQVSKCTRCP 124 Query: 92 -LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150 L T T+ +M IG P ++ G+PF G+ G +LDK++++ ++ R+ I Sbjct: 125 ELAETRTQTVFGVGNPRAKIMFIGEAPGADEDKQGEPFVGRAGKLLDKIIEACQMKRSDI 184 Query: 151 HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210 +I+ I PPGNRN +++E CR + QIE++ P ++ G+ ++D Sbjct: 185 YIANILRCRPPGNRNPTDLEASNCRGYLDAQIEIVDPDYIVCWGSVAAKNLLHSDL-PIG 243 Query: 211 QNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 + G + + T HP L++ P KKN W + Sbjct: 244 KMRGDFYEY----GRAKVVCTYHPSYLLRNPSAKKNVWEDM 280 >gi|33597880|ref|NP_885523.1| bacteriophage-related DNA polymerase [Bordetella parapertussis 12822] gi|33574309|emb|CAE38642.1| bacteriophage-related DNA polymerase [Bordetella parapertussis] Length = 298 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 55/223 (24%), Positives = 94/223 (42%), Gaps = 3/223 (1%) Query: 36 TYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCST 95 R + +A Q + A + L +L+ L++ C LC Sbjct: 76 AASPARAPRPPVAAPQRAEPAAEADGQAARAAVAARAAGADLGQLQQLVQDCTACGLCQG 135 Query: 96 SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISM 154 + + M++G P + ++ G PF G++G +LD MLQS+ + R + I+ Sbjct: 136 RRHAVFGMGAQPARWMVVGEAPGEQEDRQGLPFVGRSGKLLDAMLQSVGMSRERDVFIAN 195 Query: 155 ISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLG 214 + PPGNRN E+ C P + RQI L++P+ +L +G +A G Sbjct: 196 VIKCRPPGNRNPKPEEIAACSPYLRRQIALLNPERILVLGRFAAQTLLGTEA-TIGNLRG 254 Query: 215 KWSNLCT-PHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 + +L T IP + + HP L++ P K W L+ + Sbjct: 255 RVHSLQTDEGRSIPVVVSYHPAYLLRSPAEKARAWQDLLLAAR 297 >gi|307824421|ref|ZP_07654646.1| phage SPO1 DNA polymerase-related protein [Methylobacter tundripaludum SV96] gi|307734405|gb|EFO05257.1| phage SPO1 DNA polymerase-related protein [Methylobacter tundripaludum SV96] Length = 228 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 60/251 (23%), Positives = 105/251 (41%), Gaps = 26/251 (10%) Query: 11 QILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSI 70 T + G+ + + + + +P+ ++ Sbjct: 2 DNATRLQYLEAMGIDVWL---------------------PRAVADNQQTSTPVAIAENAR 40 Query: 71 AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130 + S L++ + C LC T T+ + + D MIIG P ++ G PF G Sbjct: 41 PESTDSWEALQAEVAPCTQCDLCKTRTQTVFGSGNKNADWMIIGEGPGQHEDQQGLPFVG 100 Query: 131 KTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 G +L +ML++I + R ++ I+ I PP NR+ IE+E C+P +MRQI L+ PKI+ Sbjct: 101 NAGLLLTEMLRAIGLDREEVFITNIVKCRPPANRDPKPIEIETCKPYLMRQIALLKPKII 160 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 + +G + D + + GK L P + HP L++ L K+ W Sbjct: 161 VVLGRIAAQALLDTD-EPISKLRGKIHALN----DTPVVVVYHPAYLLRSMLDKRKAWAD 215 Query: 251 LITLKKALKNL 261 L + +KN+ Sbjct: 216 LKLALQTVKNI 226 >gi|220935320|ref|YP_002514219.1| phage SPO1 DNA polymerase-related protein [Thioalkalivibrio sp. HL-EbGR7] gi|219996630|gb|ACL73232.1| phage SPO1 DNA polymerase-related protein [Thioalkalivibrio sp. HL-EbGR7] Length = 241 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 54/227 (23%), Positives = 94/227 (41%), Gaps = 7/227 (3%) Query: 34 EATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC-HL 92 + + S P+ V + + EL + + + C L Sbjct: 18 QRWVPRAVPDAPAASGAVPVAYEASQAPAPVVEVSAGDVSQLDWDELAARVAACSRCGEL 77 Query: 93 CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQ-IH 151 +T T+ D + IG P ++ G+PF G+ G +LD ML ++ + R + ++ Sbjct: 78 AATRTQTVFGVGDRQADWLFIGEAPGAEEDRQGEPFVGRAGQLLDSMLFALGLKRGRGVY 137 Query: 152 ISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQ 211 I+ I PPGNR+ E CR + RQI+LI P+I++ +G D + Sbjct: 138 IANILKCRPPGNRDPKPEEARACRAYLDRQIDLIQPRIIVALGRIAAQNLLGTD-----E 192 Query: 212 NLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 LG+ + IP + T HP L++ P K+ W L ++ + Sbjct: 193 PLGRLRGKPLNYRDIPLVITYHPAYLLRQPADKRKAWEDLCLARRVM 239 >gi|53719792|ref|YP_108778.1| putative phage-related DNA polymerase [Burkholderia pseudomallei K96243] gi|52210206|emb|CAH36185.1| putative phage-related DNA polymerase [Burkholderia pseudomallei K96243] Length = 284 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 +P+ A + + EL++ + C LC +T+ E D Sbjct: 71 EPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCERCRLCEKRTNTVFGVGDERADW 130 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169 M++G P ++++ G+PF G+ G +LD ML+++ + R ++I+ + PPGNRN Sbjct: 131 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 190 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E+ C P + RQ+ L+ PK+++ +G D G+ +P + Sbjct: 191 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 245 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 T HP L++ K W L ++ Sbjct: 246 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 276 >gi|299067423|emb|CBJ38622.1| uracil-DNA glycosylase,phage-related protein [Ralstonia solanacearum CMR15] Length = 289 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 56/234 (23%), Positives = 94/234 (40%), Gaps = 8/234 (3%) Query: 28 FDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSF 87 + P + + P+V +A IA A +L+S + Sbjct: 59 IEAPPVAVAEVVSVAMPAAAAVATVADVPIEPIDPVVPRAQRIA--AFDWAQLESAVSGC 116 Query: 88 HDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR 147 C LC T+ D M+IG P + ++ G+PF G+ G +LD ML++I + R Sbjct: 117 TACKLCERRTQTVFGVGDRQADWMLIGEAPGEQEDRQGEPFVGQAGKLLDSMLRAIGLSR 176 Query: 148 TQ-IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206 + I+ + PPGNR+ E+ +C P + RQI LI P++++ +G Sbjct: 177 ETGVFIANVLKCRPPGNRDPEPDEVAMCDPYLKRQIALIKPRVIIVLGRFAAQSLLQ-TQ 235 Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 + GK + +P + T HP L++ K W L +K Sbjct: 236 TPVGKLRGKVHEV----DGVPVVVTYHPAYLLRTLTDKARAWEDLCLARKVYTE 285 >gi|114570739|ref|YP_757419.1| phage SPO1 DNA polymerase-like protein [Maricaulis maris MCS10] gi|114341201|gb|ABI66481.1| phage SPO1 DNA polymerase-related protein [Maricaulis maris MCS10] Length = 286 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 66/270 (24%), Positives = 111/270 (41%), Gaps = 20/270 (7%) Query: 8 SQEQILTIALFYADSGV--YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHI------ 59 ++ + + ++AD+G+ P A S + A Sbjct: 12 DEKALQALIAWWADAGIEMDEPIVTPRPAAAPVSPHTTEPRRQAPAEPVRAATPQAARAA 71 Query: 60 ----HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115 A S+A KA SL L+ + +F C L T+ +T+ A +M++G Sbjct: 72 GFGDSPATGPGARSVAAKADSLDALREAIEAFEGCALKRTARNTVFARGERAARVMLVGE 131 Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICR 175 P ++ G+PF+G++G +LD+M +I I R Q +I+ + W PPGNR + E+ C Sbjct: 132 APGRDEDERGEPFAGQSGRLLDQMFAAIGIERDQAYIAHMLNWRPPGNRAPTQDEIAQCL 191 Query: 176 PIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH-------SIIPT 228 P I R I L P IL+ G +D + G+W + + I Sbjct: 192 PFIERHIALKKPDILVLAGELGARALLRSDT-AITRLRGRWVDYVLRDAEGNPTSTSIKA 250 Query: 229 LATVHPQELIQYPLIKKNTWHALITLKKAL 258 L P+ L+ P+ K+ W ++ L L Sbjct: 251 LPVFSPRYLLARPVEKRLAWQDMLALADQL 280 >gi|302382435|ref|YP_003818258.1| phage SPO1 DNA polymerase-related protein [Brevundimonas subvibrioides ATCC 15264] gi|302193063|gb|ADL00635.1| phage SPO1 DNA polymerase-related protein [Brevundimonas subvibrioides ATCC 15264] Length = 261 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 57/263 (21%), Positives = 105/263 (39%), Gaps = 8/263 (3%) Query: 2 TSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60 + + I ++ F+ D+GV F D P + + + + + + Sbjct: 1 MNAQPRETAAIESLLAFWRDAGVDACFEDAPQDRTIVVAPALKAVTRATASVMPVVDM-- 58 Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS-TSLSTICATQTEGQDLMIIGYTPSD 119 A +A A ++ L++ SF C L + + +++IG P Sbjct: 59 GDATADARRLANGADTMEALEAAAASFRGCELVGMGARGCVFGRGDPHAPVLVIGEAPGA 118 Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIM 179 ++ +G+PF G+ G +LDKML + + ++ I+ W PPGNR + E C P + Sbjct: 119 EEDATGQPFVGQPGKLLDKMLAAAGLA-DKVFITNTVFWRPPGNRTPTPQEQAACAPFVE 177 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT--PHSIIPTLATVHPQEL 237 R L+ P+ +L +G + G W P +AT+HP L Sbjct: 178 RAFFLMKPRAVLLLGAAAARSVL-RTEDGIMKVRGHWREWRLTEGDVTAPVIATLHPAFL 236 Query: 238 IQYPLIKKNTWHALITLKKALKN 260 ++ P K+ W ++ L L+ Sbjct: 237 LKQPQAKRQAWADMLELAARLEA 259 >gi|88810468|ref|ZP_01125725.1| Phage SPO1 DNA polymerase-related protein [Nitrococcus mobilis Nb-231] gi|88792098|gb|EAR23208.1| Phage SPO1 DNA polymerase-related protein [Nitrococcus mobilis Nb-231] Length = 265 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 105/258 (40%), Gaps = 8/258 (3%) Query: 7 LSQEQILTIALFYADSGVYWVFDE---PNNEATYESQRKEKSIDSAIQP--ITNIRHIHS 61 + L + G+ +A E+ SI+ +QP + + Sbjct: 1 MKTRDGLFRLQYLQRLGIDVWVRRQGGAAEQAPVENTTGRASIERLVQPGVVVEDTADTN 60 Query: 62 PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121 P L+ ++ C L T + + LM+IG P + Sbjct: 61 PARLITAEAEIARLDWEALRERVQHCERCLLHQTRMQGVFGIGNPQAQLMLIGEAPGAEE 120 Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ 181 + G+PF G+ G +LD+ML++I + R +++I+ + PP NR+ + E+ C P + RQ Sbjct: 121 DRRGEPFVGRAGKLLDEMLRAIGLSRERVYITNVLKSRPPNNRDPTPDEVAACEPYLRRQ 180 Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241 +ELI+P ++L +G + + + G W + P T HP L++ P Sbjct: 181 LELIAPSLILALGRIAAQYLLKSTQSL-GRLRGAWHHY--GPRATPLRVTYHPAYLLRSP 237 Query: 242 LIKKNTWHALITLKKALK 259 K W L +++ L+ Sbjct: 238 ADKHKAWQDLKQVRQCLR 255 >gi|313679738|ref|YP_004057477.1| phage spo1 DNA polymerase-related protein [Oceanithermus profundus DSM 14977] gi|313152453|gb|ADR36304.1| phage SPO1 DNA polymerase-related protein [Oceanithermus profundus DSM 14977] Length = 205 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 11/192 (5%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 SL EL + C L + LMI+G P ++ G+PF G+ G + Sbjct: 2 SLEELAAQAAHCTACRLHEGRTHVVFGEGDPDAKLMIVGEGPGADEDAQGRPFVGRAGQL 61 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP-IIMRQIELISPKILLFIG 194 LD++L++ I R+ ++I+ I PPGNRN E +IC +++QIELI P+I++ +G Sbjct: 62 LDRILEAAGIPRSSVYITNIVKCRPPGNRNPLPDEAKICSSLWLLKQIELIRPQIIVPLG 121 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWH 249 + FF + G+W I HP L++ P K TW Sbjct: 122 SVATQFFLGEKL-PITKVRGQWFEWN----GIQVFPMFHPAYLLRNPSRAPGSPKALTWK 176 Query: 250 ALITLKKALKNL 261 + T+K+ L L Sbjct: 177 DIQTVKQTLDRL 188 >gi|116621468|ref|YP_823624.1| phage SPO1 DNA polymerase-like protein [Candidatus Solibacter usitatus Ellin6076] gi|116224630|gb|ABJ83339.1| phage SPO1 DNA polymerase-related protein [Candidatus Solibacter usitatus Ellin6076] Length = 244 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 95/256 (37%), Gaps = 26/256 (10%) Query: 7 LSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQ 66 + + + FY D + ++ R+ +A+ P P ++ Sbjct: 1 MDADSLRQYLEFYQDLHIQTLY------------RRTAPPVAAVTPAPIALAAPEPKMEL 48 Query: 67 ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126 +A SL ++ + H C L + E L+ +G P ++ G Sbjct: 49 PP-LAPPNDSLLKIIQDIGDCHRCKLGDARNKIVFGVGDEKAQLVFVGEGPGADEDEQGI 107 Query: 127 PFSGKTGNMLDKMLQSIEI------MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180 PF G+ G +L +M+++ R ++I + PPGNR EMEIC + R Sbjct: 108 PFVGRAGQLLTQMIENTSKKEGIPLKRGDVYICNVVKCRPPGNRTPEPEEMEICGEFLYR 167 Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ- 239 Q+ I PK + +G + + + GKW IP + T HP L++ Sbjct: 168 QLSTIRPKAICALGGTAARAVTGHK-EGVTKMRGKWFKWQ----DIPVMVTYHPSYLLRP 222 Query: 240 -YPLIKKNTWHALITL 254 K+ W L + Sbjct: 223 FNENAKREAWEDLKKV 238 >gi|34498909|ref|NP_903124.1| DNA-directed DNA polymerase [Chromobacterium violaceum ATCC 12472] gi|34104758|gb|AAQ61115.1| probable DNA-directed DNA polymerase, bacteriophage-type [Chromobacterium violaceum ATCC 12472] Length = 280 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 53/240 (22%), Positives = 97/240 (40%), Gaps = 10/240 (4%) Query: 20 ADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKAC--SL 77 A+SG+ EP + + ++ S+ + +A ++ Sbjct: 41 AESGMPDPALEP--RSLIPAPQETASVAPPASNFSPPEQPQPAAEPLRAEVATESPLLDW 98 Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 +L+ + DC LC T T+ M+IG P ++++ G PF G+ G +LD Sbjct: 99 PQLQRKVSDCQDCRLCETRTQTVFGRGNPQARWMLIGEAPGENEDRQGLPFVGRAGQLLD 158 Query: 138 KMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ML + + R Q +I+ + PPGNRN + E+ C +++QI I P +++ +G Sbjct: 159 NMLSAAGLDREQDVYIANVLKCRPPGNRNPAPDEIAACNGYLLQQIRHIQPTLIVALGRF 218 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 + GK +P + + HP L++ K W L+ +K Sbjct: 219 AAQTLL-ETESSIGRLRGKVHRYQ----GLPLVVSYHPAYLLRNQPDKAKAWQDLLLARK 273 >gi|296120473|ref|YP_003628251.1| phage SPO1 DNA polymerase-related protein [Planctomyces limnophilus DSM 3776] gi|296012813|gb|ADG66052.1| phage SPO1 DNA polymerase-related protein [Planctomyces limnophilus DSM 3776] Length = 305 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 87/220 (39%), Gaps = 6/220 (2%) Query: 36 TYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCH-LCS 94 E ++ A T P +A++ L +LK + + C L S Sbjct: 82 ELEMAKRSARSQMAPPAPTASGIAPQPPKLLNLPLAERVHELEKLKKCVANCTRCPELAS 141 Query: 95 TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154 T T+ +M +G P ++ +G PF G+ G +LD ++ + ++ R +I+I Sbjct: 142 TRKQTVFGVGNPQAKIMFLGEAPGADEDATGVPFVGRAGQLLDGIIAACKLKREEIYICN 201 Query: 155 ISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLG 214 I PPGNR S E CR + QI +++P+ ++ G+ + + G Sbjct: 202 ILRCRPPGNRLPSPEEAGNCREWLDGQISIVNPEYIICWGSTAAKNLLG-TTEAIGKLRG 260 Query: 215 KWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 K T HP L++ P KK+ W + Sbjct: 261 KLFEY----GRAKVCCTYHPSYLLRNPPAKKDVWQDMKWF 296 >gi|289523071|ref|ZP_06439925.1| uracil-DNA glycosylase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503614|gb|EFD24778.1| uracil-DNA glycosylase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 211 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 44/192 (22%), Positives = 81/192 (42%), Gaps = 9/192 (4%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 + L+ ++ C L ++ + +LM +G P +++ G PF GK G Sbjct: 19 ETWKILEEKVKECRKCPLSENRTQSVFGEGSRKTELMFVGEGPGADEDLQGLPFVGKAGQ 78 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 +L+++ + I R++++I+ + PP NR + E C + QI L+ PKIL+ +G Sbjct: 79 LLNQIFAAAGIDRSEVYITNVVKCRPPQNRVPTVEECSACNDYLFAQISLVQPKILITLG 138 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK-----KNTWH 249 N + + Q GKW + I + HP L++ K TW Sbjct: 139 NTPTKWLLKTTHEGITQLRGKWFDWY----GIKLMPMFHPSYLLRNQSRKVGSPRHLTWQ 194 Query: 250 ALITLKKALKNL 261 + +K + Sbjct: 195 DIQEVKARWDEI 206 >gi|187928331|ref|YP_001898818.1| phage SPO1 DNA polymerase-like protein [Ralstonia pickettii 12J] gi|187725221|gb|ACD26386.1| phage SPO1 DNA polymerase-related protein [Ralstonia pickettii 12J] Length = 264 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 54/238 (22%), Positives = 94/238 (39%), Gaps = 8/238 (3%) Query: 24 VYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSL 83 V EP + + +A IA A +L++ Sbjct: 30 VEVAAAEPVAVEVEADSFVAAESVPVRGEPPVMHALSDTAAPRAQRIA--AFDWAQLEAA 87 Query: 84 LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143 + + C LC +T+ + M+IG P + ++ G+PF G+ G +LD ML+SI Sbjct: 88 VSNCTSCKLCERRTNTVFGVGDREAEWMLIGEAPGEQEDKQGEPFVGQAGKLLDSMLRSI 147 Query: 144 EIMRTQ-IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202 + R + + I+ + PPGNR+ E +C P + RQI L+ P+I++ +G Sbjct: 148 GLSREKGVFIANVLKCRPPGNRDPEPDEAAMCDPYLKRQIALVKPRIIVVLGRVAAQNLL 207 Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 + G ++ +P + T HP L++ K W L +K Sbjct: 208 Q-TQTPVGKLRGTVHDVE----GVPVVVTYHPAYLLRTLTDKARAWEDLCLARKIYAE 260 >gi|206602194|gb|EDZ38676.1| Uracil-DNA glycosylase, family 4 [Leptospirillum sp. Group II '5-way CG'] Length = 245 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 2/203 (0%) Query: 56 IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115 A + L L+ + + C L T + LM +G Sbjct: 34 PSPGKDVEKVPAAPMPSFPEDLDGLERFVLACQACSLSETRNQVVFGEGRGTSGLMFVGE 93 Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICR 175 P ++ +G+PF G+ G +L KM+Q++ + R +++I+ PPGNR S E + C Sbjct: 94 GPGADEDRTGRPFVGRAGELLTKMIQAMGLSREEVYIANTVKCRPPGNRVPSPEERKACF 153 Query: 176 PIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 P + QI L+ PK ++ +G + + G L + I + T HP Sbjct: 154 PFLEAQIRLLKPKYMILLGQTAAQVVL-RQSAGITRIRGTCCELP-EYPGIKIMPTYHPA 211 Query: 236 ELIQYPLIKKNTWHALITLKKAL 258 L++ P K++ W L T+ + Sbjct: 212 YLLRNPSAKRDVWSDLQTVMGWM 234 >gi|33602783|ref|NP_890343.1| bacteriophage-related DNA polymerase [Bordetella bronchiseptica RB50] gi|33577225|emb|CAE35782.1| bacteriophage-related DNA polymerase [Bordetella bronchiseptica RB50] Length = 242 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 55/223 (24%), Positives = 94/223 (42%), Gaps = 3/223 (1%) Query: 36 TYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCST 95 R + +A Q + A + L +L+ L++ C LC Sbjct: 20 AASPARAPRPPVAAPQRAEPAAEADGQAARAAVAARAAGADLGQLQQLVQDCTACGLCQG 79 Query: 96 SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISM 154 + + M++G P + ++ G PF G++G +LD MLQS+ + R + I+ Sbjct: 80 RRHAVFGMGAQPARWMVVGEAPGEQEDRQGLPFVGRSGKLLDAMLQSVGMSRERDVFIAN 139 Query: 155 ISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLG 214 + PPGNRN E+ C P + RQI L++P+ +L +G +A G Sbjct: 140 VIKCRPPGNRNPKPEEIAACSPYLRRQIALLNPERILVLGRFAAQTLLGTEA-TIGNLRG 198 Query: 215 KWSNLCT-PHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 + +L T IP + + HP L++ P K W L+ + Sbjct: 199 RVHSLQTDEGRSIPVVVSYHPAYLLRSPAEKARAWQDLLLAAR 241 >gi|325474785|gb|EGC77971.1| DNA polymerase domain-containing protein [Treponema denticola F0402] Length = 264 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 64/266 (24%), Positives = 108/266 (40%), Gaps = 18/266 (6%) Query: 7 LSQEQILTIALFYADSGVY---WVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPL 63 + E+ T+ F+ + Y + DE + + + D+++ + PL Sbjct: 1 MKAEEKKTLYTFFRTASEYLSGFKTDEEYPDFADTALSETAIPDTSLPETEGTDGLTIPL 60 Query: 64 VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQ-------TEGQDLMIIGYT 116 SL ++ + + S C LC +T+ ++M+IG Sbjct: 61 NDT--DSENGFESLEKVYAQIASCKACRLCERRHNTVAGEGPCEFSNFDNKIEVMVIGEG 118 Query: 117 PSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICR 175 P ++ G+PF GK G +LDKML +IE+ R +I+ + PP NR+ E CR Sbjct: 119 PGADEDAQGRPFVGKAGQLLDKMLAAIELYRTHNCYITNVVKCRPPNNRDPLPDETAACR 178 Query: 176 PIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 + QI LI PK +L +G + + GK+ IP +AT HP Sbjct: 179 NYLNAQIALIKPKAILVVGRVALQNLLG-TQEGIGKMHGKFFEYQN----IPLMATYHPS 233 Query: 236 ELIQYPLIKKNTWHALITLKKALKNL 261 L++ +K+ W L + L L Sbjct: 234 ALLRDVNLKRPAWEDLKLFRSRLNEL 259 >gi|189183624|ref|YP_001937409.1| bacteriophage-type DNA polymerase [Orientia tsutsugamushi str. Ikeda] gi|189180395|dbj|BAG40175.1| bacteriophage-type DNA polymerase [Orientia tsutsugamushi str. Ikeda] Length = 268 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 67/252 (26%), Positives = 125/252 (49%), Gaps = 9/252 (3%) Query: 15 IALFYADSGVY--WVFD--EPNNEATYESQRKEKSIDSAIQPI-TNIRHIHSPLVQQADS 69 +Y+ G+ ++D N+ + K K++ + N ++ H ++ + Sbjct: 11 ALKWYSYMGIDDNIIYDGTASLNQCNSINISKAKTLIAQNSSGFNNNQNTHLAVLSNSRQ 70 Query: 70 IAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129 +A +L +LKS + SF C L T+L+T+ +M+IG P +++ G PF Sbjct: 71 LADSVHTLEDLKSSVTSFDGCLLKKTALNTVFGDGIPSAQIMLIGEAPGQNEDKHGIPFC 130 Query: 130 GKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188 G++G +LD MLQSI + RT+ +I+ W PP NR ++ E+ ICRP + + I +I+PK Sbjct: 131 GESGKLLDNMLQSINLSRTKNVYITNTVFWRPPANRRPTSDELVICRPFVEKHIAIINPK 190 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI--IPTLATVHPQELIQYPLIKKN 246 +++ +G+ D K + ++ + IP A HP +++ PL KK Sbjct: 191 LIILVGSTAATSMLG-DHVKISKIRQEYFLYKNCYLTFSIPITAIFHPAYMLRQPLQKKA 249 Query: 247 TWHALITLKKAL 258 W L+ +++ + Sbjct: 250 CWFDLLKIQQFI 261 >gi|73541626|ref|YP_296146.1| Phage SPO1 DNA polymerase-related protein [Ralstonia eutropha JMP134] gi|72119039|gb|AAZ61302.1| Phage SPO1 DNA polymerase-related protein [Ralstonia eutropha JMP134] Length = 285 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 7/213 (3%) Query: 46 IDSAIQPITNIR-HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQ 104 ++ +P+ + + A A L + + + C LCST +T+ Sbjct: 69 AEAFAEPLPPAVVDLPVIAPVSDRAAAIAAMDWPTLDAAVAACEACGLCSTRTNTVFGVG 128 Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGN 163 + M+IG P +++++ G+PF G+ G +LD ML S+ + R + I+ + PPGN Sbjct: 129 DREAEWMLIGEAPGENEDLQGEPFVGQAGKLLDNMLASLGLRRGRNVFIANVLKCRPPGN 188 Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH 223 RN E++ C P + RQI L+ PK+++ +G + G + Sbjct: 189 RNPEPAEVDQCEPFLKRQIALVRPKVIVVLGRFAAQSLL-RTTTPIGKLRGTVHSYE--- 244 Query: 224 SIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 IP + T HP L++ K W L ++ Sbjct: 245 -GIPVVVTYHPAYLLRTLTDKARAWEDLCLARE 276 >gi|268315592|ref|YP_003289311.1| phage SPO1 DNA polymerase-like protein [Rhodothermus marinus DSM 4252] gi|262333126|gb|ACY46923.1| phage SPO1 DNA polymerase-related protein [Rhodothermus marinus DSM 4252] Length = 263 Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 58/252 (23%), Positives = 101/252 (40%), Gaps = 9/252 (3%) Query: 14 TIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQK 73 + YA G + P +T E + + QP +A + Sbjct: 11 ALLQEYALLGPLGFWKTPVAMSTPEHAPSNQDLFGQPQPPPESAPADPYARIEALIPPES 70 Query: 74 A----CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129 +L E+ + + + + + DLM+IG P ++ G+PF Sbjct: 71 PLRAMRTLDEVARYVAETVLIPIDARRTNPVFGVGNPEADLMVIGEAPGAEEDRQGEPFV 130 Query: 130 GKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189 G G +L+KML++I R +++I+ + PP NR+ E+E PI+ +QI L+ P+I Sbjct: 131 GPAGQLLNKMLKAIGFEREEVYITNVLKSRPPHNRDPQPDEIEAHLPILYKQIALVKPRI 190 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249 +L +G N + GK + +P + T HP L++ P K+ W Sbjct: 191 ILCVGRIAGNALLGRNGSLRA-LRGKVHDF----HGLPVVVTFHPAALLRNPQWKRLAWE 245 Query: 250 ALITLKKALKNL 261 L L+ L Sbjct: 246 DLQLLRAHYDRL 257 >gi|197121903|ref|YP_002133854.1| phage SPO1 DNA polymerase-related protein [Anaeromyxobacter sp. K] gi|196171752|gb|ACG72725.1| phage SPO1 DNA polymerase-related protein [Anaeromyxobacter sp. K] Length = 295 Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 56/282 (19%), Positives = 95/282 (33%), Gaps = 41/282 (14%) Query: 10 EQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADS 69 ++ + +GV V P E A Sbjct: 15 AELARHLRWLEAAGVREV---PVPVLAVEPPAPAAHARQAGPAAERGAPAGRAPASPPPP 71 Query: 70 IAQK---------------------------------ACSLHELKSLLRSFHDCHLCSTS 96 Q + +L +++ L C L Sbjct: 72 GQQAPPAAPREAPARTPAPVAPAPVAGAHRIGEKGCGSAALVQVRDALGDCRRCKLAGGR 131 Query: 97 LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156 + + +L+ +G P ++ G+PF GK G +L KM+Q++ R Q++I+ + Sbjct: 132 TTLVFGVGNPQAELVFVGEGPGADEDREGEPFVGKAGQLLTKMIQAMGYQREQVYIANVV 191 Query: 157 PWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKW 216 PPGNRN E+E C P + Q+ I P++++ +G D + G+W Sbjct: 192 KCRPPGNRNPEPDEIEACEPFLRAQLAAIRPRVVVALGKFAAQTLL-RDTTPITRLRGRW 250 Query: 217 SNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 I + T HP L++ P KK W L + K L Sbjct: 251 REYE----GIRLMPTFHPAYLLRSPEEKKKAWEDLQLVMKEL 288 >gi|160872254|ref|ZP_02062386.1| phage SPO1 DNA polymerase domain protein [Rickettsiella grylli] gi|159121053|gb|EDP46391.1| phage SPO1 DNA polymerase domain protein [Rickettsiella grylli] Length = 240 Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 3/206 (1%) Query: 54 TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113 ++ + ELK + C L T + + DL+++ Sbjct: 30 ARVKDEDMSEKPMTRQQKISTMNWQELKLAVNHCKACDLYKTRSNPVFGVGNPHADLLVV 89 Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173 G P ++ G+PF G+ G +L ML SI R +I+ I PP NR+ S E+ Sbjct: 90 GEAPGAHEDKQGEPFVGRGGQLLTNMLSSIGFKREDYYIANILKSRPPNNRDPSLEEVSA 149 Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 C P ++RQI LI PK++L +G ++ + ++ + G IP L T H Sbjct: 150 CTPYLLRQINLIKPKLILAVGRIAAHYLLSTES-TMARLRGNLF--YFGERKIPLLVTYH 206 Query: 234 PQELIQYPLIKKNTWHALITLKKALK 259 P L++ P K+ W + +KK L Sbjct: 207 PAYLLRSPREKRKAWQDMRCVKKQLD 232 >gi|94310339|ref|YP_583549.1| phage SPO1 DNA polymerase-related protein [Cupriavidus metallidurans CH34] gi|93354191|gb|ABF08280.1| DNA polymerase bacteriophage-type,uracil-DNA glycosylase superfamily [Cupriavidus metallidurans CH34] Length = 317 Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 55/228 (24%), Positives = 92/228 (40%), Gaps = 6/228 (2%) Query: 30 EPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHD 89 NEA + + I VQ L + Sbjct: 86 HAVNEAEVAETIEAFDAPGPAHAVEVPVPIALAPVQDGREALIATMDWPVLADSVAGCTA 145 Query: 90 CHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-T 148 C LCST +T+ + + M++G P +++++ G+PF G+ G +LD ML ++ + R Sbjct: 146 CGLCSTRTNTVFGVGDQQAEWMLVGEAPGENEDLQGEPFVGQAGKLLDNMLGALGLARGR 205 Query: 149 QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQK 208 ++I+ + PPGNRN E+ C P + RQI LI PK+++ +G + Sbjct: 206 NVYIANVLKCRPPGNRNPEPGEVAQCEPYLKRQIALIKPKVIVVLGRFAAQSLLRSTTPI 265 Query: 209 TYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 GK + IP + T HP L++ K W L ++ Sbjct: 266 -----GKLRGAVHSYEGIPVVVTYHPAYLLRTLTDKARAWEDLCLARE 308 >gi|300704264|ref|YP_003745867.1| uracil-DNA glycosylase,phage-like protein [Ralstonia solanacearum CFBP2957] gi|299071928|emb|CBJ43257.1| uracil-DNA glycosylase,phage-related protein [Ralstonia solanacearum CFBP2957] Length = 279 Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 53/240 (22%), Positives = 96/240 (40%), Gaps = 10/240 (4%) Query: 26 WVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKAC----SLHELK 81 V DEP + ++I S P + A + + +L+ Sbjct: 41 AVADEPAPFIIEPPVIEPRAIVSEAPPPMAPAAAPMADISVAPELPRAQRIAAFDWAQLE 100 Query: 82 SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 + + C LC T+ + M+IG P + ++ G+PF G+ G +LD ML+ Sbjct: 101 AAVSGCTACKLCERRTQTVFGVGDRQAEWMLIGEAPGEQEDRQGEPFVGQAGKLLDSMLR 160 Query: 142 SIEIMRTQ-IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF 200 ++ + R + I+ + PPGNR+ E+ +C P + RQI L+ P++++ +G Sbjct: 161 AVGLSRETGVFIANVLKCRPPGNRDPEPDEVAMCDPYLKRQIALVKPRVIIVLGRFAAQS 220 Query: 201 FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 + GK + +P + T HP L++ K W L +K Sbjct: 221 LLQ-TQTPVGKLRGKVHEV----DGVPVVVTYHPAYLLRTLTDKARAWEDLCLARKVYTE 275 >gi|167816412|ref|ZP_02448092.1| putative phage-related DNA polymerase [Burkholderia pseudomallei 91] Length = 262 Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 +P+ A + + EL++ + C LC +T+ E D Sbjct: 49 EPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCERCRLCEKRTNTVFGVGDERADW 108 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169 M++G P ++++ G+PF G+ G +LD ML+++ + R ++I+ + PPGNRN Sbjct: 109 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 168 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E+ C P + RQ+ L+ PK+++ +G D G+ +P + Sbjct: 169 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 223 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 T HP L++ K W L ++ Sbjct: 224 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 254 >gi|149926134|ref|ZP_01914396.1| Phage SPO1 DNA polymerase-related protein [Limnobacter sp. MED105] gi|149824952|gb|EDM84164.1| Phage SPO1 DNA polymerase-related protein [Limnobacter sp. MED105] Length = 233 Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 55/190 (28%), Positives = 93/190 (48%), Gaps = 2/190 (1%) Query: 68 DSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127 D + + SL L+ ++ C LC T T+ A LM++G P ++ +G+P Sbjct: 41 DEMLPASLSLESLQEMVAVCKKCGLCETRKQTVFADGIPHAPLMVVGEGPGVDEDATGRP 100 Query: 128 FSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186 F GK+G +LD+ML+++ R +I+ + HPPGNRN E++ C P +++QI+ Sbjct: 101 FVGKSGQLLDRMLKAVGASRTNNTYIANVVKCHPPGNRNPEQAEIDQCSPYLVQQIKASR 160 Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKN 246 P++LL +G N + G + IP + T HP L++ K+ Sbjct: 161 PQVLLLVGRFAIQTLLNTKKPV-GELRGTVHRVIVDGLDIPAVVTYHPAYLLRRSEEKQK 219 Query: 247 TWHALITLKK 256 W L+ LK+ Sbjct: 220 AWDDLLLLKQ 229 >gi|167903291|ref|ZP_02490496.1| phage SPO1 DNA polymerase domain protein [Burkholderia pseudomallei NCTC 13177] Length = 311 Score = 189 bits (479), Expect = 5e-46, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 +P+ A + + EL++ + C LC +T+ E D Sbjct: 98 EPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDERADW 157 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169 M++G P ++++ G+PF G+ G +LD ML+++ + R ++I+ + PPGNRN Sbjct: 158 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 217 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E+ C P + RQ+ L+ PK+++ +G D G+ +P + Sbjct: 218 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 272 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 T HP L++ K W L ++ Sbjct: 273 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 303 >gi|220916695|ref|YP_002491999.1| phage SPO1 DNA polymerase-related protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219954549|gb|ACL64933.1| phage SPO1 DNA polymerase-related protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 205 Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats. Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 8/202 (3%) Query: 60 HSPLVQQADSIAQK---ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYT 116 V A I +K + +L +++ L C L + + +L+ +G Sbjct: 2 APAPVAGAHRIGEKGCGSAALVQVRDALGDCRRCKLAGGRTTLVFGVGNPQAELVFVGEG 61 Query: 117 PSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP 176 P ++ G+PF GK G +L KM+Q++ R Q++I+ + PPGNRN E+E C P Sbjct: 62 PGADEDREGEPFVGKAGQLLTKMIQAMGYQREQVYIANVVKCRPPGNRNPEPDEIEACEP 121 Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236 + Q+ I P++++ +G D + G+W I + T HP Sbjct: 122 FLRAQLAAIRPRVVVALGKFAAQTLL-RDTTPITRLRGRWREYE----GIRLMPTFHPAY 176 Query: 237 LIQYPLIKKNTWHALITLKKAL 258 L++ P KK W L + K L Sbjct: 177 LLRSPEEKKKAWEDLQLVMKEL 198 >gi|209518016|ref|ZP_03266847.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp. H160] gi|209501520|gb|EEA01545.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp. H160] Length = 292 Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats. Identities = 56/245 (22%), Positives = 97/245 (39%), Gaps = 22/245 (8%) Query: 29 DEPNNEATYESQRKEKSIDSAIQPITNIRH-----------IHSPLVQQADSIAQKAC-- 75 DEP + + D + P ++ +P +A A Sbjct: 39 DEPVARPEASQPQPQSQPDRSAPPTLDVPPDDDFAWFDDPGAPAPEPVEARRDAPALPAI 98 Query: 76 ---SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 L + C LC +T+ D M+IG P ++++ G+PF G+ Sbjct: 99 HTLDWDALAERVAGCEACRLCEKRTNTVFGVGDREADWMLIGEAPGENEDRQGEPFVGQA 158 Query: 133 GNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191 G +LD ML+S+ + R T ++I+ + PPGNRN E+ C P + RQ+ L+ PK+++ Sbjct: 159 GKLLDNMLRSLALARGTNVYIANVIKCRPPGNRNPQPDEVARCEPYLQRQVSLVKPKLIV 218 Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 +G +A G+ +P + T HP L++ K W L Sbjct: 219 ALGRFAAQSLLKTEA-SISSLRGRVHTYE----GVPVIVTYHPAYLLRSLPDKAKAWADL 273 Query: 252 ITLKK 256 ++ Sbjct: 274 CLARE 278 >gi|42527991|ref|NP_973089.1| DNA polymerase domain-containing protein [Treponema denticola ATCC 35405] gi|41819036|gb|AAS13008.1| DNA polymerase domain protein [Treponema denticola ATCC 35405] Length = 264 Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats. Identities = 65/266 (24%), Positives = 107/266 (40%), Gaps = 18/266 (6%) Query: 7 LSQEQILTIALFYADSGVY---WVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPL 63 + E+ T+ F+ + Y + DE + + D+A+ + PL Sbjct: 1 MKAEEKKTLYTFFRTASEYLSGFKTDEEYPDFADTVLSETAIPDTALPETDEAAGLTIPL 60 Query: 64 VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQ-------TEGQDLMIIGYT 116 SL ++ + + S C LC +T+ ++M+IG Sbjct: 61 SDTDSESG--FESLEKVYAQIASCKACRLCERRHNTVAGEGPCEFSNFDNKIEVMVIGEG 118 Query: 117 PSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICR 175 P ++ G+PF GK G +LDKML +IE+ R +I+ + PP NR+ E CR Sbjct: 119 PGADEDAQGRPFVGKAGQLLDKMLAAIELYRTHNCYITNVVKCRPPNNRDPLPDETAACR 178 Query: 176 PIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 + QI LI PK +L +G + + GK+ IP +AT HP Sbjct: 179 NYLNAQIALIRPKAILVVGRVALQNLL-ETQEGIGKMHGKFFEYQN----IPLMATYHPS 233 Query: 236 ELIQYPLIKKNTWHALITLKKALKNL 261 L++ +K+ W L + L L Sbjct: 234 ALLRDVNLKRPAWEDLKLFRSRLNEL 259 >gi|157804236|ref|YP_001492785.1| N-terminus of bacteriophage-type DNA polymerase [Rickettsia canadensis str. McKiel] gi|157785499|gb|ABV74000.1| N-terminus of bacteriophage-type DNA polymerase [Rickettsia canadensis str. McKiel] Length = 262 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 66/253 (26%), Positives = 121/253 (47%), Gaps = 9/253 (3%) Query: 16 ALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSP----LVQQADSI 70 + + GV Y+ +P + Q + + I I + + + A S+ Sbjct: 5 LKWLSAIGVEYYCSTQPQKLNFDKPQENNQINPMPRKTIDKILEVDTDKMHTNISLARSL 64 Query: 71 AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130 A K ++ EL+ L +F+ C L S +T+ + +M+IG P ++++ G PF G Sbjct: 65 ADKVNNIEELRESLLNFNGCKLKKFSTNTVFGDGNQKAQVMLIGEAPGSTEDLKGIPFCG 124 Query: 131 KTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189 ++GN+LD ML SI I R +I+ W PP NR + E++ICRP + + I LI+PK+ Sbjct: 125 ESGNLLDNMLHSIGISRKNNAYITNTVFWRPPANRQPTLEEVDICRPFVEKHIALINPKL 184 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT--VHPQELIQYPLIKKNT 247 ++ +G+ + ++ + P T HP L+++P+ K+ + Sbjct: 185 IILVGSTAATSLLG-KNSGITKIRQEYYFYTNKYLSSPIQTTTIFHPAYLLRHPMQKRTS 243 Query: 248 WHALITLKKALKN 260 W+ L+ +K+ L N Sbjct: 244 WYDLLKIKEYLVN 256 >gi|17546088|ref|NP_519490.1| DNA polymerase-related protein, bacteriophage-type [Ralstonia solanacearum GMI1000] gi|17428384|emb|CAD15071.1| putative uracil-dna glycosylase-related protein [Ralstonia solanacearum GMI1000] Length = 292 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 50/204 (24%), Positives = 85/204 (41%), Gaps = 6/204 (2%) Query: 58 HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117 S + A +L++ + C LC T+ D M+IG P Sbjct: 90 PTDSTDPVAPRAQRIAAFDWAQLEAAVSGCTACKLCERRTQTVFGVGDRQADWMLIGEAP 149 Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQ-IHISMISPWHPPGNRNLSNIEMEICRP 176 + ++ G+PF G+ G +LD ML++I + R + I+ + PPGNR+ E+ +C P Sbjct: 150 GEQEDRQGEPFVGQAGKLLDSMLRAIGLSRETGVFIANVLKCRPPGNRDPEPDEVAMCDP 209 Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236 + RQI LI P++++ +G + GK + +P + T HP Sbjct: 210 YLKRQIALIKPRVIVVLGRFAAQSLLQ-TQTPVGKLRGKVHEV----DGVPVVVTYHPAY 264 Query: 237 LIQYPLIKKNTWHALITLKKALKN 260 L++ K W L +K Sbjct: 265 LLRTLTDKARAWEDLCLARKVYTE 288 >gi|189499343|ref|YP_001958813.1| phage SPO1 DNA polymerase-related protein [Chlorobium phaeobacteroides BS1] gi|189494784|gb|ACE03332.1| phage SPO1 DNA polymerase-related protein [Chlorobium phaeobacteroides BS1] Length = 208 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 5/203 (2%) Query: 58 HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117 +S Q +S A +L++L ++ C L T + + +++IG P Sbjct: 7 EENSSANAQKESAAGAFRNLNDLYEQSKNCRKCRLADTRTNFVFGEGNPEAKIVVIGEAP 66 Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177 ++ G+PF G++G +LDK+L++I R + I I PP NRN E+ C P Sbjct: 67 GAEEDAQGRPFVGRSGKLLDKILEAIGFSRDDVFICNIIKCRPPANRNPLADEITCCMPW 126 Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237 + Q+ L+ P +LL +G N +N G + + T HP L Sbjct: 127 LNAQLALLDPAVLLLLGKVAANTLLDNKQSM-----GNLRGKIIRWNGYDVIVTYHPAAL 181 Query: 238 IQYPLIKKNTWHALITLKKALKN 260 ++ P K+ W + L+ Sbjct: 182 LRNPNWKRQCWDDVRMLRSHYDK 204 >gi|148284759|ref|YP_001248849.1| Uracil-DNA glycosylase [Orientia tsutsugamushi str. Boryong] gi|146740198|emb|CAM80476.1| Uracil-DNA glycosylase [Orientia tsutsugamushi str. Boryong] Length = 268 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 67/252 (26%), Positives = 124/252 (49%), Gaps = 9/252 (3%) Query: 15 IALFYADSGVY--WVFD--EPNNEATYESQRKEKSIDSAIQPI-TNIRHIHSPLVQQADS 69 +Y+ G+ ++D ++ S K K++ N ++ H ++ + Sbjct: 11 ALKWYSYMGIDDNIIYDGTASFDQCNSISISKAKTLIDQNSAGFNNNQNTHLAVLSDSRQ 70 Query: 70 IAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129 +A +L +LKS + SF C L T+L+T+ +M+IG P +++ G PF Sbjct: 71 LADSVHTLEDLKSSVTSFDGCLLKKTALNTVFGDGIPSAPIMLIGEAPGQNEDKHGIPFC 130 Query: 130 GKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188 G++G +LD MLQSI + RT+ +I+ W PP NR ++ E+ ICRP + + I +I+PK Sbjct: 131 GESGKLLDNMLQSINLSRTKNVYITNTVFWRPPANRRPTSDELVICRPFVEKHIAIINPK 190 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI--IPTLATVHPQELIQYPLIKKN 246 +++ +G+ D K + ++ + IP A HP +++ PL KK Sbjct: 191 LIILVGSTAATSMLG-DHVKISKIRQEYFLYKNCYLTFSIPITAIFHPAYMLRQPLQKKA 249 Query: 247 TWHALITLKKAL 258 W L+ +++ + Sbjct: 250 CWFDLLKIQQFI 261 >gi|171057063|ref|YP_001789412.1| phage SPO1 DNA polymerase-like protein [Leptothrix cholodnii SP-6] gi|170774508|gb|ACB32647.1| phage SPO1 DNA polymerase-related protein [Leptothrix cholodnii SP-6] Length = 294 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 57/224 (25%), Positives = 104/224 (46%), Gaps = 11/224 (4%) Query: 43 EKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICA 102 +D A L+Q A + A A EL++++ + C LC + T+ Sbjct: 74 RPRVDPAPAAPAAPLARPGGLIQAAPAGAVSALDWPELQAVVEACRACGLCESRRQTVFG 133 Query: 103 TQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR------TQIHISMIS 156 M++G P + +++ G+PF GK G +LD ML+++ + R Q++I+ + Sbjct: 134 VGHHQAHWMLVGEAPGEQEDLQGEPFVGKAGQLLDNMLRAVGLTREQAEPARQVYIANVL 193 Query: 157 PWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKW 216 PPGNRN E++ C P + RQ+EL+ P+++L +G ++ + GK Sbjct: 194 KCRPPGNRNPDPQEVQRCEPFLQRQVELVRPRLILAMGRFAVQSLLK-TSEPIGRLRGKS 252 Query: 217 SNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 + +P + T HP L++ PL K W L ++ ++ Sbjct: 253 HHY----HGVPVVVTYHPAYLLRNPLDKARAWEDLCLARELIQA 292 >gi|167720198|ref|ZP_02403434.1| putative phage-related DNA polymerase [Burkholderia pseudomallei DM98] Length = 237 Score = 188 bits (477), Expect = 6e-46, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 +P+ A + + EL++ + C LC +T+ E D Sbjct: 24 EPVHEPALPDVAARPAATTPSVAELGWDELRARVADCERCRLCEKRTNTVFGVGDERADW 83 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169 M++G P ++++ G+PF G+ G +LD ML+++ + R ++I+ + PPGNRN Sbjct: 84 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 143 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E+ C P + RQ+ L+ PK+++ +G D G+ +P + Sbjct: 144 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 198 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 T HP L++ K W L ++ Sbjct: 199 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 229 >gi|114319713|ref|YP_741396.1| phage SPO1 DNA polymerase-related protein [Alkalilimnicola ehrlichii MLHE-1] gi|114226107|gb|ABI55906.1| phage SPO1 DNA polymerase-related protein [Alkalilimnicola ehrlichii MLHE-1] Length = 264 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 57/254 (22%), Positives = 104/254 (40%), Gaps = 15/254 (5%) Query: 19 YADSGVYWVFDEP---NNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKAC 75 GV P A + D A +P + + + A +A Sbjct: 14 LRQMGVDLYVPRPGAGPQVADAVPAGPDPVRDGAPEPGPAPADVVTAPPAAEPAAASEAD 73 Query: 76 ---------SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126 + L+ + C LC +T+ + DL+++G P ++ G+ Sbjct: 74 PTSGDVARLNWAALEDRVAGCRLCGLCEGRRNTVFGVGSRQADLVLVGEGPGAEEDKRGE 133 Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186 PF G+ G +LD+ML +I + R++++I + PP NR+ E+ CRP + RQ+ L+ Sbjct: 134 PFVGQAGRLLDRMLAAIGLDRSRVYICNVVKCRPPRNRDPRPEEVAACRPYLERQLTLLE 193 Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKN 246 P++++ +G + + N + G +P LAT HP L++ P K Sbjct: 194 PRLIVALGRVSAHQLLNVTTPL-GRLRGGLHRYAPVD--VPLLATYHPAYLLRNPADKAR 250 Query: 247 TWHALITLKKALKN 260 W L +++ L Sbjct: 251 AWEDLKRIRRILAE 264 >gi|300113321|ref|YP_003759896.1| phage SPO1 DNA polymerase-like protein [Nitrosococcus watsonii C-113] gi|299539258|gb|ADJ27575.1| phage SPO1 DNA polymerase-related protein [Nitrosococcus watsonii C-113] Length = 231 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 93/220 (42%), Gaps = 7/220 (3%) Query: 41 RKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI 100 ++ + + P+ P+ A +++ EL + C L + T+ Sbjct: 18 QQRQPTSTGKTPLVETGEEPIPVAPSAGVMSE----WEELAVQVAGCKACSLHRSRTQTV 73 Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160 + +I+G P ++ G+PF G+ G +L+ ML+++ + R Q++I+ I P Sbjct: 74 FGVGDQAAKWLIVGEAPGAEEDRQGEPFVGRAGQLLNAMLEAVGLQRGQVYIANILKCRP 133 Query: 161 PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220 P NR+ E+ C + RQI L+ P+I+L +G + + G Sbjct: 134 PNNRDPLPEEVAHCESYLRRQIALLRPRIILAVGRVAGQNLLKSSLPL-GRLRGSVHQY- 191 Query: 221 TPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 P + IP + T HP L++ P K+ W L K + Sbjct: 192 -PETAIPLVVTYHPAYLLRAPREKRRAWQDLRLALKVYRE 230 >gi|323701469|ref|ZP_08113142.1| phage SPO1 DNA polymerase-related protein [Desulfotomaculum nigrificans DSM 574] gi|323533478|gb|EGB23344.1| phage SPO1 DNA polymerase-related protein [Desulfotomaculum nigrificans DSM 574] Length = 184 Score = 188 bits (476), Expect = 8e-46, Method: Composition-based stats. Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 4/186 (2%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 SL +L ++ C L + + + LM+IG P ++ G+PF G+ G + Sbjct: 2 SLEQLALDIQGCTRCGLAAGRTNIVFGDGNPSGKLMLIGEGPGKDEDEQGRPFVGRAGQL 61 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 LD++L +I + R ++I+ I PP NR + E C P + RQIELI P+I++ +G+ Sbjct: 62 LDRILAAINLTRQDVYIANIVKCRPPNNRVPTRAEAVACLPYLYRQIELIKPRIIVLLGS 121 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 +A + + G+W + I + T HP +++ P ++ W ++ Sbjct: 122 TALQNLIGPEA-RITKMRGQWLESKS---GIKIMPTFHPAAVLRDPNKRRPVWEDFQKIQ 177 Query: 256 KALKNL 261 + L Sbjct: 178 EEYLRL 183 >gi|288940110|ref|YP_003442350.1| phage SPO1 DNA polymerase-like protein [Allochromatium vinosum DSM 180] gi|288895482|gb|ADC61318.1| phage SPO1 DNA polymerase-related protein [Allochromatium vinosum DSM 180] Length = 331 Score = 188 bits (476), Expect = 9e-46, Method: Composition-based stats. Identities = 59/238 (24%), Positives = 97/238 (40%), Gaps = 11/238 (4%) Query: 24 VYWVFDEPNNEATY---ESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHEL 80 EP + E+ S+ + + + V + + L Sbjct: 102 ADAPSAEPESWPFPDWDETPEYSPSLMDEWDAMGHPPASEAEAVNPIERM-----DWDAL 156 Query: 81 KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML 140 + +R C L T T+ DLMIIG P ++ G+PF G+ G +L +ML Sbjct: 157 DAAVRGCRACRLWETRTKTVFGVGDRRADLMIIGEAPGADEDRQGEPFVGRAGQLLTRML 216 Query: 141 QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF 200 +I R Q++I+ + PPGNR+ E C+ + RQ+ LI P+++L +G + Sbjct: 217 AAIGFSREQVYIANVLKCRPPGNRDPKPDEALACQAYLHRQVALIEPRVILSVGRISAQQ 276 Query: 201 FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 D + G+W + H IP T HP L++ P K W L + + L Sbjct: 277 LLKTDTPV-GRLRGQWFDYGPAH--IPLRVTYHPAYLLRSPEQKAKAWDDLTEVWRRL 331 >gi|67639488|ref|ZP_00438341.1| uracil-DNA glycosylase, family 4 [Burkholderia mallei GB8 horse 4] gi|238520036|gb|EEP83500.1| uracil-DNA glycosylase, family 4 [Burkholderia mallei GB8 horse 4] Length = 252 Score = 188 bits (476), Expect = 9e-46, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 +P+ A + + EL++ + C LC +T+ E D Sbjct: 39 EPVHEPALPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 98 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169 M++G P ++++ G+PF G+ G +LD ML+++ + R ++I+ + PPGNRN Sbjct: 99 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 158 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E+ C P + RQ+ L+ PK+++ +G D G+ +P + Sbjct: 159 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 213 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 T HP L++ K W L ++ Sbjct: 214 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 244 >gi|33594425|ref|NP_882069.1| bacteriophage-related DNA polymerase [Bordetella pertussis Tohama I] gi|33564500|emb|CAE43815.1| bacteriophage-related DNA polymerase [Bordetella pertussis Tohama I] gi|332383836|gb|AEE68683.1| DNA polymerase [Bordetella pertussis CS] Length = 298 Score = 188 bits (476), Expect = 9e-46, Method: Composition-based stats. Identities = 56/223 (25%), Positives = 95/223 (42%), Gaps = 3/223 (1%) Query: 36 TYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCST 95 R + +A Q + A + L +L+ L++ C LC Sbjct: 76 AASPTRAPRPPVAAPQRAEPAAEADGQAARAAVAARAAGADLGQLQQLVQDCTACGLCQG 135 Query: 96 SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISM 154 + + M++G P + ++ G PF G++G +LD MLQS+ + R + I+ Sbjct: 136 RRHAVFGMGAQPARWMVVGEAPGEQEDRQGLPFVGRSGKLLDAMLQSVGMSRERDVFIAN 195 Query: 155 ISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLG 214 + PPGNRN E+ C P + RQI L++P+ +L +G N +A G Sbjct: 196 VIKCRPPGNRNPKPEEIAACSPYLRRQIALLNPERILVLGRFAAQTLLNTEA-TIGNLRG 254 Query: 215 KWSNLCT-PHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 + +L T IP + + HP L++ P K W L+ + Sbjct: 255 RVHSLQTDEGRSIPVVVSYHPAYLLRSPAEKARAWQDLLLAAR 297 >gi|115352126|ref|YP_773965.1| phage SPO1 DNA polymerase--like protein [Burkholderia ambifaria AMMD] gi|115282114|gb|ABI87631.1| phage SPO1 DNA polymerase-related protein [Burkholderia ambifaria AMMD] Length = 367 Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 56/237 (23%), Positives = 92/237 (38%), Gaps = 6/237 (2%) Query: 25 YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLL 84 EP A + D A T P + + L + + Sbjct: 124 DRASAEPAPFAAADDMPPATEDDFAWFDATPPGDPLPPDEARPAATPVAMLDWDTLAARV 183 Query: 85 RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIE 144 C LC +T+ D M+IG P ++++ G+PF G+ G +LD MLQS+ Sbjct: 184 ADCTSCRLCEKRTNTVFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLLDNMLQSLA 243 Query: 145 IMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 + R ++I+ + PPGNRN E+ C P + RQ+ L+ PK+++ +G Sbjct: 244 LKRGENVYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVALVKPKLIVALGRFAAQTLLK 303 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 DA G+ +P + T HP L++ K W L + + Sbjct: 304 TDASIAS-LRGRVHTYE----GVPVIVTYHPAYLLRSLQDKSKAWADLCLARDTFQQ 355 >gi|77165973|ref|YP_344498.1| Phage SPO1 DNA polymerase-related protein [Nitrosococcus oceani ATCC 19707] gi|254436357|ref|ZP_05049863.1| uracil-DNA glycosylase, family 4 [Nitrosococcus oceani AFC27] gi|76884287|gb|ABA58968.1| Phage SPO1 DNA polymerase-related protein [Nitrosococcus oceani ATCC 19707] gi|207088047|gb|EDZ65320.1| uracil-DNA glycosylase, family 4 [Nitrosococcus oceani AFC27] Length = 231 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 7/220 (3%) Query: 41 RKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI 100 ++ + + +P+ PL A+ A EL + S C L T+ Sbjct: 18 QQRQPTSTGKKPLVETGEELIPLAPSAEV----ASEWEELAVQVASCTACLLHCGRTQTV 73 Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160 + +I+G P ++ G+PF G+ G +L+ ML+++ + R Q++I+ I P Sbjct: 74 FGVGDQAAKWLIVGEAPGVEEDRQGEPFVGRAGQLLNAMLEAVGLQRGQVYIANILKCRP 133 Query: 161 PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220 P NR+ E+ C P + RQ+ L+ P+I+L +G + + G Sbjct: 134 PNNRDPLPEEVAHCEPYLRRQVALLRPRIILAVGRVAGQNLLKSSLPL-GRLRGSVHQY- 191 Query: 221 TPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 P + IP + T HP L++ P K+ W L K + Sbjct: 192 -PETTIPLVVTYHPAYLLRAPREKRRAWQDLQLAHKVYRE 230 >gi|124515689|gb|EAY57198.1| Uracil-DNA glycosylase, family 4 [Leptospirillum rubarum] Length = 243 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 2/185 (1%) Query: 74 ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 + L+ +R+ C L T + LM +G P ++ +G+PF G+ G Sbjct: 50 PEDIDGLERFVRTCQICSLSETRNQVVFGEGRGTSGLMFVGEGPGADEDRTGRPFVGRAG 109 Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 +L KM+Q++ + R +++I+ PPGNR S E C P + QI L+ PK ++ + Sbjct: 110 ELLTKMIQAMGLSREEVYIANTVKCRPPGNRVPSPEERNACFPFLEAQIRLLKPKYMILL 169 Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253 G ++ + G+ + + I + T HP L++ P KK+ W L T Sbjct: 170 GQTATQVILK-QSEGITRIRGRCFEMP-EYPGIKMMPTYHPAYLLRNPSAKKDVWSDLQT 227 Query: 254 LKKAL 258 + + Sbjct: 228 VMGWM 232 >gi|167919542|ref|ZP_02506633.1| phage SPO1 DNA polymerase domain protein [Burkholderia pseudomallei BCC215] Length = 265 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 +P+ A + + EL++ + C LC +T+ E D Sbjct: 52 EPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 111 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169 M++G P ++++ G+PF G+ G +LD ML+++ + R ++I+ + PPGNRN Sbjct: 112 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 171 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E+ C P + RQ+ L+ PK+++ +G D G+ +P + Sbjct: 172 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 226 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 T HP L++ K W L ++ Sbjct: 227 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 257 >gi|167739201|ref|ZP_02411975.1| putative phage-related DNA polymerase [Burkholderia pseudomallei 14] Length = 259 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 +P+ A + + EL++ + C LC +T+ E D Sbjct: 46 EPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCERCRLCEKRTNTVFGVGDEHADW 105 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169 M++G P ++++ G+PF G+ G +LD ML+++ + R ++I+ + PPGNRN Sbjct: 106 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 165 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E+ C P + RQ+ L+ PK+++ +G D G+ +P + Sbjct: 166 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 220 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 T HP L++ K W L ++ Sbjct: 221 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 251 >gi|292490788|ref|YP_003526227.1| phage SPO1 DNA polymerase-related protein [Nitrosococcus halophilus Nc4] gi|291579383|gb|ADE13840.1| phage SPO1 DNA polymerase-related protein [Nitrosococcus halophilus Nc4] Length = 231 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 53/223 (23%), Positives = 92/223 (41%), Gaps = 9/223 (4%) Query: 39 SQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLS 98 QR+ + D A + + + A EL + + C L + Sbjct: 18 RQRQSANADRAPAVEVGGVPLGENMPTEV------APGWEELAARVAGCTACSLHCSRTQ 71 Query: 99 TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158 T+ +I+G P ++ G+PF G+ G +L+ ML+++ + R Q++I+ I Sbjct: 72 TVFGVGDREAKWLIVGEAPGADEDRQGEPFVGRAGQLLNAMLEALGLQRGQVYIANILKC 131 Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218 PP NR+ E+ C P + Q+ L+ P+I+L +G A + G Sbjct: 132 RPPKNRDPLPEEVASCEPYLRHQMALLQPRIILAVGRVAGQNLLKTSAPL-GRLRGIVHK 190 Query: 219 LCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 P + IP + T HP L++ P K+ W L K + L Sbjct: 191 Y--PDTTIPLVVTYHPAYLLRSPREKRRAWQDLRLALKVYREL 231 >gi|167824793|ref|ZP_02456264.1| phage SPO1 DNA polymerase domain protein [Burkholderia pseudomallei 9] Length = 256 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 +P+ A + + EL++ + C LC +T+ E D Sbjct: 43 EPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 102 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169 M++G P ++++ G+PF G+ G +LD ML+++ + R ++I+ + PPGNRN Sbjct: 103 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 162 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E+ C P + RQ+ L+ PK+++ +G D G+ +P + Sbjct: 163 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 217 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 T HP L++ K W L ++ Sbjct: 218 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 248 >gi|298505240|gb|ADI83963.1| uracil-DNA glycosylase [Geobacter sulfurreducens KN400] Length = 243 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 42/188 (22%), Positives = 90/188 (47%), Gaps = 5/188 (2%) Query: 71 AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130 +L +++ + H C L + + + LMIIG P +++ G+PF G Sbjct: 50 GDARETLDDIRREMGGCHRCALGAGRTNLVFGVGNPAARLMIIGEAPGRDEDLRGEPFVG 109 Query: 131 KTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 + G +L K+++++ R ++I + PP NR+ ++ E+E C ++RQ++ ++P+ + Sbjct: 110 EAGQLLTKIIEAMGFAREDVYICNVLKCRPPHNRDPASAEIEACSSFMLRQVKAVAPEAI 169 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 L +G + + G++ + IP + T+HP L++ P K++ W Sbjct: 170 LALGTFAAQTILGTK-EPISRLRGRFHDY----HGIPLMPTLHPAFLLRNPERKRDVWDD 224 Query: 251 LITLKKAL 258 + + L Sbjct: 225 VRQVMGLL 232 >gi|56751576|ref|YP_172277.1| bacteriophage-type DNA polymerase [Synechococcus elongatus PCC 6301] gi|81301352|ref|YP_401560.1| phage SPO1 DNA polymerase-related protein [Synechococcus elongatus PCC 7942] gi|56686535|dbj|BAD79757.1| DNA polymerase bacteriophage-type [Synechococcus elongatus PCC 6301] gi|81170233|gb|ABB58573.1| phage SPO1 DNA polymerase-related protein [Synechococcus elongatus PCC 7942] Length = 235 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 52/224 (23%), Positives = 87/224 (38%), Gaps = 11/224 (4%) Query: 44 KSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICAT 103 + + + P A ++ EL + C L T + Sbjct: 13 AAAEPVADAPATVDRAAIPTSASIPIPAGTFSTVEELLEPCNACQRCGLGQTRTHAVVGR 72 Query: 104 QTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM-RTQIHISMISPWHPPG 162 LM+IG P +++++ G PF GK G +LD++L ++ + ++I+ I PPG Sbjct: 73 GNPQAKLMVIGEGPGENEDLQGLPFVGKAGQLLDRILAAVSLDSNRDVYIANIVKCRPPG 132 Query: 163 NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP 222 NR + EM C P + Q+ L+ PKI+L G D + + G W Sbjct: 133 NRKPTPEEMAACVPYLQEQVRLVQPKIILLAGATAVQGLLG-DKRGITKIRGLWMEWQ-- 189 Query: 223 HSIIPTLATVHPQELIQYPLI-----KKNTWHALITLKKALKNL 261 I + HP L++ P K W + +K+ L L Sbjct: 190 --GIACMPVFHPAYLLRNPSKEQGSPKWLMWQDIQEVKRRLDEL 231 >gi|167894904|ref|ZP_02482306.1| phage SPO1 DNA polymerase domain protein [Burkholderia pseudomallei 7894] Length = 254 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 +P+ A + + EL++ + C LC +T+ E D Sbjct: 41 EPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 100 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169 M++G P ++++ G+PF G+ G +LD ML+++ + R ++I+ + PPGNRN Sbjct: 101 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 160 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E+ C P + RQ+ L+ PK+++ +G D G+ +P + Sbjct: 161 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 215 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 T HP L++ K W L ++ Sbjct: 216 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 246 >gi|157826321|ref|YP_001494041.1| N-terminus of bacteriophage-type DNA polymerase [Rickettsia akari str. Hartford] gi|157800279|gb|ABV75533.1| N-terminus of bacteriophage-type DNA polymerase [Rickettsia akari str. Hartford] Length = 329 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 58/202 (28%), Positives = 103/202 (50%), Gaps = 4/202 (1%) Query: 62 PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121 + A S+A KA ++ ELK L +F+ C L + +T+ +M+IG P ++ Sbjct: 123 DNITLARSLADKANNIAELKESLLNFNGCALKKFATNTVFGDGNLEAKIMLIGEAPGITE 182 Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMR 180 ++ G PF G++GN+LD ML +I I R +I+ W PP NR + E++IC+P + + Sbjct: 183 DLKGIPFCGESGNLLDNMLHAIGISRKNNAYITNTVFWRPPANRQPTLEEVDICKPFVEK 242 Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT--LATVHPQELI 238 I LISP +++ +G+ + ++ + P A HP L+ Sbjct: 243 HIALISPTLIILVGSTAATSLLG-KNSGITKIRQEYYFYTNKYLSAPIQTTAIFHPAYLL 301 Query: 239 QYPLIKKNTWHALITLKKALKN 260 + P+ K+ +W+ L+ +K+ L N Sbjct: 302 RQPMQKRTSWYDLLKIKEYLVN 323 >gi|152990436|ref|YP_001356158.1| uracil-DNA glycosylase [Nitratiruptor sp. SB155-2] gi|151422297|dbj|BAF69801.1| uracil-DNA glycosylase [Nitratiruptor sp. SB155-2] Length = 195 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 51/186 (27%), Positives = 94/186 (50%), Gaps = 6/186 (3%) Query: 74 ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 L L++++ H C L T + + LM IG P +++ +G+PF G+ G Sbjct: 15 PNDLEALRAIVLECHLCDLSKTRKNVVFGEGNPHAKLMFIGEGPGATEDETGRPFVGRAG 74 Query: 134 NMLDKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192 +L KM++++ EI R++++I+ I PP NR + E + C P + +QIE+I+P+IL+ Sbjct: 75 QLLTKMIENVLEIPRSEVYIANIVKCRPPNNRVPTPQEAQTCIPYLFKQIEIINPEILVA 134 Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 +G + + D + G+ + + T HP L++ P KK + L+ Sbjct: 135 LGATSYRWLTG-DNTPISKVRGQVISF----RGKKLIPTFHPSYLLRNPSKKKEAYEDLL 189 Query: 253 TLKKAL 258 +K+ L Sbjct: 190 KIKEML 195 >gi|217421553|ref|ZP_03453057.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 576] gi|217395295|gb|EEC35313.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 576] Length = 457 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 +P+ A + + EL++ + C LC +T+ E D Sbjct: 244 EPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCERCRLCEKRTNTVFGVGDEHADW 303 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169 M++G P ++++ G+PF G+ G +LD ML+++ + R ++I+ + PPGNRN Sbjct: 304 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 363 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E+ C P + RQ+ L+ PK+++ +G D G+ +P + Sbjct: 364 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 418 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 T HP L++ K W L ++ Sbjct: 419 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 449 >gi|172060990|ref|YP_001808642.1| phage SPO1 DNA polymerase-related protein [Burkholderia ambifaria MC40-6] gi|171993507|gb|ACB64426.1| phage SPO1 DNA polymerase-related protein [Burkholderia ambifaria MC40-6] Length = 345 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 56/232 (24%), Positives = 92/232 (39%), Gaps = 6/232 (2%) Query: 30 EPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHD 89 EP A + D A T P + + L + + Sbjct: 107 EPAPSAAADDMPPATEDDFAWFDATPPGEPLPPDEARPAATPVAMLDWDTLAARVADCTS 166 Query: 90 CHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-T 148 C LC +T+ D M+IG P ++++ G+PF G+ G +LD MLQS+ + R Sbjct: 167 CRLCEKRTNTVFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLLDNMLQSLALKRGE 226 Query: 149 QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQK 208 ++I+ + PPGNRN E+ C P + RQ+ L+ PK+++ +G DA Sbjct: 227 NVYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDASI 286 Query: 209 TYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 G+ +P + T HP L++ K W L + + Sbjct: 287 AS-LRGRVHTYE----GVPVIVTYHPAYLLRSLQDKSKAWADLCLARDTFQQ 333 >gi|167846322|ref|ZP_02471830.1| putative phage-related DNA polymerase [Burkholderia pseudomallei B7210] Length = 263 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 +P+ A + + EL++ + C LC +T+ E D Sbjct: 50 EPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCERCRLCEKRTNTVFGVGDEHADW 109 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169 M++G P ++++ G+PF G+ G +LD ML+++ + R ++I+ + PPGNRN Sbjct: 110 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCWPPGNRNPEPD 169 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E+ C P + RQ+ L+ PK+++ +G D G+ +P + Sbjct: 170 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 224 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 T HP L++ K W L ++ Sbjct: 225 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 255 >gi|300691643|ref|YP_003752638.1| uracil-DNA glycosylase,phage-related protein [Ralstonia solanacearum PSI07] gi|299078703|emb|CBJ51362.1| uracil-DNA glycosylase,phage-related protein [Ralstonia solanacearum PSI07] Length = 273 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 55/233 (23%), Positives = 93/233 (39%), Gaps = 8/233 (3%) Query: 29 DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFH 88 D P E A + +A IA A +L++ + Sbjct: 44 DAPAPLIEPPVAVAEVVPPVAPAAAPVAEIPADSALPRAQRIA--AFDWAQLEAAVSGCT 101 Query: 89 DCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRT 148 C LC T+ D M+IG P + ++ G+PF G+ G +LD ML++I + R Sbjct: 102 ACKLCERRTQTVFGVGDRQADWMLIGEAPGEQEDRQGEPFVGQAGKLLDSMLRAIGLSRE 161 Query: 149 Q-IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207 + + I+ + PPGNR+ E+ +C P + RQI L+ P++++ +G Sbjct: 162 RGVFIANVLKCRPPGNRDPEPDEVAMCDPYLKRQIALVKPRVIIVLGRFAAQSLLQ-TQT 220 Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 + GK + +P + T HP L++ K W L +K Sbjct: 221 PVGKLRGKVHEV----DGVPVVVTYHPAYLLRTLTDKARAWEDLCLARKVYAE 269 >gi|83748580|ref|ZP_00945600.1| Uracil DNA glycosylase superfamily protein [Ralstonia solanacearum UW551] gi|83724788|gb|EAP71946.1| Uracil DNA glycosylase superfamily protein [Ralstonia solanacearum UW551] Length = 277 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 52/241 (21%), Positives = 95/241 (39%), Gaps = 11/241 (4%) Query: 26 WVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSP-----LVQQADSIAQKACSLHEL 80 V DEP + + + S +P + + A +L Sbjct: 38 AVADEPAPFIIEPPVIEPRVVVSEAEPPPMAPPAAPVADIPVAPELPRAQRIAAFDWAQL 97 Query: 81 KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML 140 ++ + C LC T+ D M+IG P + ++ G+PF G+ G +LD ML Sbjct: 98 EAAVSGCTACKLCERRTQTVFGVGDRQADWMLIGEAPGEQEDRQGEPFVGQAGKLLDSML 157 Query: 141 QSIEIMRTQ-IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199 +++ + R + I+ + PPGNR+ E+ +C P + RQI L+ P++++ +G Sbjct: 158 RAVGLSRETGVFIANVLKCRPPGNRDPEPDEVAMCDPYLKRQIALVKPRVIIVLGRFAAQ 217 Query: 200 FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 + G+ + +P + T HP L++ K W L +K Sbjct: 218 SLLQ-TQTPVGKLRGRVHEV----DGVPVVVTYHPAYLLRTLTDKARAWEDLCLARKVYA 272 Query: 260 N 260 Sbjct: 273 E 273 >gi|53723916|ref|YP_103220.1| phage SPO1 DNA polymerase domain-containing protein [Burkholderia mallei ATCC 23344] gi|52427339|gb|AAU47932.1| phage SPO1 DNA polymerase domain protein [Burkholderia mallei ATCC 23344] Length = 220 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 +P+ A + + EL++ + C LC +T+ E D Sbjct: 7 EPVHEPALPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 66 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169 M++G P ++++ G+PF G+ G +LD ML+++ + R ++I+ + PPGNRN Sbjct: 67 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 126 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E+ C P + RQ+ L+ PK+++ +G D G+ +P + Sbjct: 127 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 181 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 T HP L++ K W L ++ Sbjct: 182 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 212 >gi|325981465|ref|YP_004293867.1| phage SPO1 DNA polymerase-like protein [Nitrosomonas sp. AL212] gi|325530984|gb|ADZ25705.1| phage SPO1 DNA polymerase-related protein [Nitrosomonas sp. AL212] Length = 251 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 6/210 (2%) Query: 53 ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMI 112 ++ ++ + +LK + C L T T+ T + + Sbjct: 33 PAPSKNEDITSSFTHKENLGQSKEIDQLKLAVSHCTACPLSKTRTHTVFGTGDKNASWLF 92 Query: 113 IGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEM 171 +G P ++ +G+PF G+ G +LD+ML +I++ R + +I+ I PP NRN S E Sbjct: 93 VGEGPGAREDETGEPFVGQAGKLLDQMLFAIQLNRRHMIYITNIVKCRPPNNRNPSTYEA 152 Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231 C P + +QI LI PKI++ +G D GK + S IP + T Sbjct: 153 AQCEPFLTQQIALIKPKIIIALGKVAAQSLLKCD-NSISSLRGKIHDY----SGIPLIVT 207 Query: 232 VHPQELIQYPLIKKNTWHALITLKKALKNL 261 HP L++ K W L + + +L Sbjct: 208 YHPAYLLRSLPEKAKAWRDLCFARSVMGSL 237 >gi|167911532|ref|ZP_02498623.1| phage SPO1 DNA polymerase domain protein [Burkholderia pseudomallei 112] Length = 261 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 +P+ A + + EL++ + C LC +T+ E D Sbjct: 48 EPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 107 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169 M++G P ++++ G+PF G+ G +LD ML+++ + R ++I+ + PPGNRN Sbjct: 108 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 167 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E+ C P + RQ+ L+ PK+++ +G D G+ +P + Sbjct: 168 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 222 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 T HP L++ K W L ++ Sbjct: 223 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 253 >gi|254197195|ref|ZP_04903617.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei S13] gi|169653936|gb|EDS86629.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei S13] Length = 455 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 +P+ A + + EL++ + C LC +T+ E D Sbjct: 242 EPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCERCRLCEKRTNTVFGVGDEHADW 301 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169 M++G P ++++ G+PF G+ G +LD ML+++ + R ++I+ + PPGNRN Sbjct: 302 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 361 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E+ C P + RQ+ L+ PK+++ +G D G+ +P + Sbjct: 362 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 416 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 T HP L++ K W L ++ Sbjct: 417 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 447 >gi|39996228|ref|NP_952179.1| phage shock protein E [Geobacter sulfurreducens PCA] gi|39982993|gb|AAR34452.1| phage SPO1 DNA polymerase-related protein [Geobacter sulfurreducens PCA] Length = 235 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 42/188 (22%), Positives = 90/188 (47%), Gaps = 5/188 (2%) Query: 71 AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130 +L +++ + H C L + + + LMIIG P +++ G+PF G Sbjct: 42 GDARETLDDIRREMGGCHRCALGAGRTNLVFGVGNPAARLMIIGEAPGRDEDLRGEPFVG 101 Query: 131 KTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 + G +L K+++++ R ++I + PP NR+ ++ E+E C ++RQ++ ++P+ + Sbjct: 102 EAGQLLTKIIEAMGFAREDVYICNVLKCRPPHNRDPASAEIEACSSFMLRQVKAVAPEAI 161 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 L +G + + G++ + IP + T+HP L++ P K++ W Sbjct: 162 LALGTFAAQTILGTK-EPISRLRGRFHDY----HGIPLMPTLHPAFLLRNPERKRDVWDD 216 Query: 251 LITLKKAL 258 + + L Sbjct: 217 VRQVMGLL 224 >gi|207723323|ref|YP_002253722.1| uracil-dna glycosylase-related protein [Ralstonia solanacearum MolK2] gi|206588521|emb|CAQ35484.1| uracil-dna glycosylase-related protein [Ralstonia solanacearum MolK2] Length = 280 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 56/243 (23%), Positives = 100/243 (41%), Gaps = 15/243 (6%) Query: 26 WVFDEPNNEATYESQRKEKSIDSAIQPITNIRH-------IHSPLVQQADSIAQKACSLH 78 V DEP + + + S +P +P + +A IA A Sbjct: 41 AVADEPAPLVIEPPVIEPRVVVSEAEPPPMAPPAASVADIPVAPELPRAQRIA--AFDWA 98 Query: 79 ELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDK 138 +L++ + C LC T+ D M+IG P + ++ G+PF G+ G +LD Sbjct: 99 QLEAAVSGCTACKLCERRTQTVFGVGDRQADWMLIGEAPGEQEDRQGEPFVGQAGKLLDS 158 Query: 139 MLQSIEIMRTQ-IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197 ML+++ + R + I+ + PPGNR+ E+ +C P + RQI L+ P++++ +G Sbjct: 159 MLRAVGLSRETGVFIANVLKCRPPGNRDPEPDEVTMCDPYLKRQIALVKPRVIIVLGRFA 218 Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKA 257 + G+ + +P + T HP L++ K W L +K Sbjct: 219 AQSLLQ-TQTPVGKLRGRVHEV----DGVPVVVTYHPAYLLRTLTDKARAWEDLCLARKV 273 Query: 258 LKN 260 Sbjct: 274 YAE 276 >gi|332297808|ref|YP_004439730.1| phage SPO1 DNA polymerase-related protein [Treponema brennaborense DSM 12168] gi|332180911|gb|AEE16599.1| phage SPO1 DNA polymerase-related protein [Treponema brennaborense DSM 12168] Length = 258 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 6/207 (2%) Query: 56 IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115 AD++ + A +L + + C LC T +T+ +M+IG Sbjct: 43 PPQPSVRAAVAADTLPETAAALERIVQKIAGCTRCQLCKTRKNTVPGIGVPNPAVMVIGE 102 Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEIC 174 P ++ SG PF G+ G +LDKML SI + R T +I+ I PPGNR+ E E C Sbjct: 103 GPGADEDASGIPFVGRAGQLLDKMLASISLSRTTNCYIANIVKCRPPGNRDPLPEESEAC 162 Query: 175 RPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHP 234 + QI L+ P +L +G + GK++ IP LAT HP Sbjct: 163 AAFLEAQISLLKPAAILAVGRVAAQNLLK-TTVGIGKLRGKFTEYN----GIPFLATYHP 217 Query: 235 QELIQYPLIKKNTWHALITLKKALKNL 261 L++ +K+ W L + L+ L Sbjct: 218 SALLRNEDLKRPAWEDLKLFRSGLQQL 244 >gi|319957234|ref|YP_004168497.1| phage spo1 DNA polymerase-related protein [Nitratifractor salsuginis DSM 16511] gi|319419638|gb|ADV46748.1| phage SPO1 DNA polymerase-related protein [Nitratifractor salsuginis DSM 16511] Length = 222 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 53/194 (27%), Positives = 92/194 (47%), Gaps = 6/194 (3%) Query: 68 DSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127 AQ L EL+ L+ H C L + + LM +G P +++ +G+P Sbjct: 33 PEPAQLPDDLEELRRLVEQCHLCDLAKSRHKVVFGEGDPHARLMFVGEGPGATEDQTGRP 92 Query: 128 FSGKTGNMLDKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186 F G+ G +L +M++++ + R +++I+ I PPGNR + E CRP +++QIE+I Sbjct: 93 FVGRAGELLTRMIENVLHLRREEVYIANIVKCRPPGNRVPTPTEAFTCRPYLLKQIEIIR 152 Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKN 246 P+I++ +G + ND + G + T HP L++ P KK Sbjct: 153 PRIIMTLGATAYR-YLTNDETPISRVRGHIIQSDH----YTLVPTFHPSYLLRNPSAKKQ 207 Query: 247 TWHALITLKKALKN 260 W L+ +K L+ Sbjct: 208 AWEDLLKVKALLEK 221 >gi|198284582|ref|YP_002220903.1| phage SPO1 DNA polymerase-like protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667172|ref|YP_002427251.1| uracil-DNA glycosylase family 4 protein [Acidithiobacillus ferrooxidans ATCC 23270] gi|198249103|gb|ACH84696.1| phage SPO1 DNA polymerase-related protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519385|gb|ACK79971.1| uracil-DNA glycosylase family 4 protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 308 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 48/228 (21%), Positives = 84/228 (36%), Gaps = 6/228 (2%) Query: 35 ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94 S S P V+ + +L +++ + C L Sbjct: 84 TALPSSGTAPIPVSGTPPPVPADQASVTAVEAHRTARIATLDWRDLSNMVSTCQACPLGQ 143 Query: 95 TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HIS 153 T + + +G P ++ G+ F G+ G +LD MLQ++ + R + +I+ Sbjct: 144 TRKHAVFGAGNPHGSWLFVGEAPGAEEDRRGEAFVGRAGQLLDNMLQAMGLSRDKDAYIA 203 Query: 154 MISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL 213 I PP NR+ E+ C P + RQI L+ P++++ +G + Q Sbjct: 204 NILKCRPPNNRDPLGPEVHACTPYLQRQIALLQPRVIVALGRFAAQGLLQVNTPL-SQLR 262 Query: 214 GKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 G IP + T HP L++ P+ K+ W L L Sbjct: 263 GT----TQHFQGIPLIVTYHPAYLLRNPIDKRKVWEDLKRALGVFAEL 306 >gi|167563217|ref|ZP_02356133.1| putative phage-related DNA polymerase [Burkholderia oklahomensis EO147] Length = 253 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 6/207 (2%) Query: 55 NIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIG 114 + A + EL++ + C LC +T+ E D M+IG Sbjct: 44 PALPDVAAKPAAASEPSVAELGWDELRARVADCRRCRLCEKRTNTVFGVGDERADWMLIG 103 Query: 115 YTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEI 173 P ++++ G+PF G+ G +LD ML+++ + R ++I+ + PPGNRN E+ Sbjct: 104 EAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPDEVAR 163 Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 C P + RQ+ L+ PK+++ +G DA G+ +P + T H Sbjct: 164 CEPYLQRQVALVKPKLIVALGRFAAQTLLKTDASIAS-MRGRVHQYE----GVPVIVTYH 218 Query: 234 PQELIQYPLIKKNTWHALITLKKALKN 260 P L++ K W L A +N Sbjct: 219 PAYLLRSLQDKAKAWSDLCLANDAYRN 245 >gi|126728290|ref|ZP_01744106.1| uracil-DNA glycosylase [Sagittula stellata E-37] gi|126711255|gb|EBA10305.1| uracil-DNA glycosylase [Sagittula stellata E-37] Length = 258 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 60/263 (22%), Positives = 111/263 (42%), Gaps = 10/263 (3%) Query: 3 SKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITN--IRHI 59 + L + + GV + + P + E K + + + Sbjct: 1 MESALDWHAARAALDWQLEMGVSETLCEAPVDRFALEDAVKAERLAPRRGAAGAAPVAEP 60 Query: 60 HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSD 119 V +A + A A L L + L ++ C L + S + + +M++G P Sbjct: 61 EVDPVAEAQAAAAAAPDLPALAAALAAYDHCELKRGARSLVFSDGAAAARVMLVGEAPGR 120 Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPII 178 +++ GKPF G+ G +LD+ML ++ + R + +I+ + PW PP NR+ E+ + P + Sbjct: 121 DEDLQGKPFVGRAGQLLDRMLAAVGLSRDESVYITNVLPWRPPQNRDPKPDEIAMMLPFL 180 Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238 + I L+ P +L+ +GN + + G W P L VHP L+ Sbjct: 181 KKHIALVDPDLLVIVGNISAQALLGRRG--ITRLRGTWQEAE----GRPALPMVHPAYLL 234 Query: 239 QYPLIKKNTWHALITLKKALKNL 261 + P K+ W+ ++ LK L+ L Sbjct: 235 RNPGFKREAWNDMLELKVKLRTL 257 >gi|114331290|ref|YP_747512.1| phage SPO1 DNA polymerase-related protein [Nitrosomonas eutropha C91] gi|114308304|gb|ABI59547.1| phage SPO1 DNA polymerase-related protein [Nitrosomonas eutropha C91] Length = 245 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 61/223 (27%), Positives = 100/223 (44%), Gaps = 6/223 (2%) Query: 40 QRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLST 99 Q +S DS P + + S + +L+ ++ S C LC T T Sbjct: 25 QPSVQSSDSKENPAAHTETAVESSIVDDRSALIARANWEQLRQMVSSCTACPLCQTRKQT 84 Query: 100 ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQ-IHISMISPW 158 + E D + IG P +++ G+PF G+ G +LD MLQ+I++ R Q ++I+ I Sbjct: 85 VFGVGDEQADWLFIGEGPGAREDLLGEPFVGQAGKLLDSMLQAIDLGREQGVYIANIVKC 144 Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218 PP NRN +E + CRP ++RQI LI P++++ +G G+ Sbjct: 145 RPPDNRNPLEMEAQQCRPYLLRQIALIQPRLIITLGKVAAQNLLA-TGDSIASLRGRLHE 203 Query: 219 LCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 IP +AT HP L++ K W L ++ ++ L Sbjct: 204 FA----GIPLIATYHPAYLLRSLTDKAKAWEDLCFARRTMQAL 242 >gi|323706586|ref|ZP_08118137.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacterium xylanolyticum LX-11] gi|323534064|gb|EGB23864.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacterium xylanolyticum LX-11] Length = 187 Score = 186 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 5/183 (2%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L EL + C L + + + +M +G P +++ G+PF GK G +L Sbjct: 6 LKELIEQCMNCTKCPLHNVRNNVVFGEGNLRSKIMFVGEGPGRDEDLQGRPFVGKAGQLL 65 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 +KML++I + R ++I+ I PP NR E++ C P + Q+ +I+PKI++ +G Sbjct: 66 NKMLEAINLKREDVYIANIVKCRPPNNRVPLQSEVDACLPYLRNQVAIIAPKIIVCLGAT 125 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 + D K G+W + +AT HP L++ P K W +++ Sbjct: 126 AAKAIIDKD-FKITAMRGQWFE----KKGVKIIATYHPAALLRDPEKKYPAWEDFKSIRD 180 Query: 257 ALK 259 L Sbjct: 181 ELD 183 >gi|166999677|ref|ZP_02265512.1| uracil-DNA glycosylase, family 4 [Burkholderia mallei PRL-20] gi|243064327|gb|EES46513.1| uracil-DNA glycosylase, family 4 [Burkholderia mallei PRL-20] Length = 461 Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 +P+ A + + EL++ + C LC +T+ E D Sbjct: 248 EPVHEPALPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 307 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169 M++G P ++++ G+PF G+ G +LD ML+++ + R ++I+ + PPGNRN Sbjct: 308 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 367 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E+ C P + RQ+ L+ PK+++ +G D G+ +P + Sbjct: 368 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 422 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 T HP L++ K W L ++ Sbjct: 423 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 453 >gi|254178558|ref|ZP_04885213.1| uracil-DNA glycosylase, family 4 [Burkholderia mallei ATCC 10399] gi|160699597|gb|EDP89567.1| uracil-DNA glycosylase, family 4 [Burkholderia mallei ATCC 10399] Length = 452 Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 +P+ A + + EL++ + C LC +T+ E D Sbjct: 239 EPVHEPALPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 298 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169 M++G P ++++ G+PF G+ G +LD ML+++ + R ++I+ + PPGNRN Sbjct: 299 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 358 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E+ C P + RQ+ L+ PK+++ +G D G+ +P + Sbjct: 359 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 413 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 T HP L++ K W L ++ Sbjct: 414 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 444 >gi|254358080|ref|ZP_04974353.1| uracil-DNA glycosylase, family 4 [Burkholderia mallei 2002721280] gi|148027207|gb|EDK85228.1| uracil-DNA glycosylase, family 4 [Burkholderia mallei 2002721280] Length = 458 Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 +P+ A + + EL++ + C LC +T+ E D Sbjct: 245 EPVHEPALPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 304 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169 M++G P ++++ G+PF G+ G +LD ML+++ + R ++I+ + PPGNRN Sbjct: 305 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 364 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E+ C P + RQ+ L+ PK+++ +G D G+ +P + Sbjct: 365 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 419 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 T HP L++ K W L ++ Sbjct: 420 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 450 >gi|121599419|ref|YP_993398.1| phage SPO1 DNA polymerase domain-containing protein [Burkholderia mallei SAVP1] gi|124385331|ref|YP_001029166.1| phage SPO1 DNA polymerase domain-containing protein [Burkholderia mallei NCTC 10229] gi|126451029|ref|YP_001080906.1| uracil-DNA glycosylase [Burkholderia mallei NCTC 10247] gi|121228229|gb|ABM50747.1| phage SPO1 DNA polymerase domain protein [Burkholderia mallei SAVP1] gi|124293351|gb|ABN02620.1| phage SPO1 DNA polymerase domain protein [Burkholderia mallei NCTC 10229] gi|126243899|gb|ABO06992.1| uracil-DNA glycosylase, family 4 [Burkholderia mallei NCTC 10247] Length = 455 Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 +P+ A + + EL++ + C LC +T+ E D Sbjct: 242 EPVHEPALPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 301 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169 M++G P ++++ G+PF G+ G +LD ML+++ + R ++I+ + PPGNRN Sbjct: 302 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 361 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E+ C P + RQ+ L+ PK+++ +G D G+ +P + Sbjct: 362 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 416 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 T HP L++ K W L ++ Sbjct: 417 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 447 >gi|134277251|ref|ZP_01763966.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 305] gi|134250901|gb|EBA50980.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 305] Length = 453 Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 +P+ A + + EL++ + C LC +T+ E D Sbjct: 240 EPVHEPALPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 299 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169 M++G P ++++ G+PF G+ G +LD ML+++ + R ++I+ + PPGNRN Sbjct: 300 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 359 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E+ C P + RQ+ L+ PK+++ +G D G+ +P + Sbjct: 360 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 414 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 T HP L++ K W L ++ Sbjct: 415 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 445 >gi|171319311|ref|ZP_02908424.1| phage SPO1 DNA polymerase-related protein [Burkholderia ambifaria MEX-5] gi|171095493|gb|EDT40460.1| phage SPO1 DNA polymerase-related protein [Burkholderia ambifaria MEX-5] Length = 229 Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 53/222 (23%), Positives = 88/222 (39%), Gaps = 6/222 (2%) Query: 40 QRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLST 99 D A P +A + L + + C LC +T Sbjct: 1 MPPATEDDFAWFDAAPPGDPLPPDESRAAATPVAMLDWDTLAARVADCTSCRLCEKRTNT 60 Query: 100 ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPW 158 + D M+IG P ++++ G+PF G+ G +LD MLQS+ + R ++I+ + Sbjct: 61 VFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLLDNMLQSLALKRGENVYIANVIKC 120 Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218 PPGNRN E+ C P + RQ+ L+ PK+++ +G DA G+ Sbjct: 121 RPPGNRNPEPDEVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDASIAS-LRGRVHT 179 Query: 219 LCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 +P + T HP L++ K W L + + Sbjct: 180 YE----GVPVIVTYHPAYLLRSLQDKSKAWADLCLARDTFQQ 217 >gi|262198188|ref|YP_003269397.1| phage SPO1 DNA polymerase-related protein [Haliangium ochraceum DSM 14365] gi|262081535|gb|ACY17504.1| phage SPO1 DNA polymerase-related protein [Haliangium ochraceum DSM 14365] Length = 380 Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 48/229 (20%), Positives = 95/229 (41%), Gaps = 11/229 (4%) Query: 33 NEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHL 92 + + +A +P+ P + +L ++++ L C L Sbjct: 153 DRDRDRTAAARPPESAAHEPLAREPAAREPAPRPQR------RTLTDVRATLGDCQRCKL 206 Query: 93 CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHI 152 S + + LM +G P ++ G+PF G G +LDKM+ ++ R ++I Sbjct: 207 ASGRENIVFGVGDPRAALMFVGEAPGFHEDRRGEPFVGNAGELLDKMIAAMGWTRDTVYI 266 Query: 153 SMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN 212 + + PP NR+ E+ C+P + QI+ ++P+IL+ +G + Sbjct: 267 ANVLKCRPPNNRDPQPDEIAACQPFLAEQIDAVAPRILVTLGRPAAH-LLLQTTAPMSAL 325 Query: 213 LGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 G++ + + T HP L++ P K++TW+ L + L+ L Sbjct: 326 RGRFQEY----RGVRVMPTFHPAFLLRRPERKRDTWNDLKLVIAELERL 370 >gi|134300898|ref|YP_001114394.1| phage SPO1 DNA polymerase-like protein [Desulfotomaculum reducens MI-1] gi|134053598|gb|ABO51569.1| phage SPO1 DNA polymerase-related protein [Desulfotomaculum reducens MI-1] Length = 187 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 4/186 (2%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 SL +L +++ C L + LM+IG P ++ G PF G+ G + Sbjct: 2 SLEQLAKDMQNCTRCGLSEGRNKLVFGVGNPKAKLMLIGEGPGKDEDEQGVPFVGRAGQL 61 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 LD++L +I++ R ++I+ I PP NR + +E + C P + RQIELI P+I++ +GN Sbjct: 62 LDRILAAIDLTREDVYIANIVKCRPPNNRVPNRVEAKACLPYLYRQIELIQPQIIVLLGN 121 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 DA + + G+W + I +AT HP +++ P ++ W ++ Sbjct: 122 TALQNLIGPDA-RITKMRGQWLESQS---GIKIIATYHPAAVLRDPNRRRPVWEDFQMVQ 177 Query: 256 KALKNL 261 + L Sbjct: 178 EEYHKL 183 >gi|126438636|ref|YP_001059495.1| uracil-DNA glycosylase [Burkholderia pseudomallei 668] gi|126218129|gb|ABN81635.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 668] Length = 455 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 +P+ A + + EL++ + C LC +T+ E D Sbjct: 242 EPVHEPALPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 301 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169 M++G P ++++ G+PF G+ G +LD ML+++ + R ++I+ + PPGNRN Sbjct: 302 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 361 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E+ C P + RQ+ L+ PK+++ +G D G+ +P + Sbjct: 362 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 416 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 T HP L++ K W L ++ Sbjct: 417 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 447 >gi|126454213|ref|YP_001066778.1| uracil-DNA glycosylase [Burkholderia pseudomallei 1106a] gi|242316127|ref|ZP_04815143.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 1106b] gi|126227855|gb|ABN91395.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 1106a] gi|242139366|gb|EES25768.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 1106b] Length = 455 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 +P+ A + + EL++ + C LC +T+ E D Sbjct: 242 EPVHEPALPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 301 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169 M++G P ++++ G+PF G+ G +LD ML+++ + R ++I+ + PPGNRN Sbjct: 302 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 361 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E+ C P + RQ+ L+ PK+++ +G D G+ +P + Sbjct: 362 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 416 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 T HP L++ K W L ++ Sbjct: 417 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 447 >gi|254189318|ref|ZP_04895829.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei Pasteur 52237] gi|157936997|gb|EDO92667.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei Pasteur 52237] Length = 476 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 +P+ A + + EL++ + C LC +T+ E D Sbjct: 263 EPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 322 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169 M++G P ++++ G+PF G+ G +LD ML+++ + R ++I+ + PPGNRN Sbjct: 323 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 382 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E+ C P + RQ+ L+ PK+++ +G D G+ +P + Sbjct: 383 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 437 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 T HP L++ K W L ++ Sbjct: 438 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 468 >gi|254297183|ref|ZP_04964636.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 406e] gi|157807234|gb|EDO84404.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 406e] Length = 464 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 +P+ A + + EL++ + C LC +T+ E D Sbjct: 251 EPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 310 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169 M++G P ++++ G+PF G+ G +LD ML+++ + R ++I+ + PPGNRN Sbjct: 311 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 370 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E+ C P + RQ+ L+ PK+++ +G D G+ +P + Sbjct: 371 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 425 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 T HP L++ K W L ++ Sbjct: 426 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 456 >gi|76811418|ref|YP_334000.1| phage SPO1 DNA polymerase domain-containing protein [Burkholderia pseudomallei 1710b] gi|254261802|ref|ZP_04952856.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 1710a] gi|76580871|gb|ABA50346.1| phage SPO1 DNA polymerase domain protein [Burkholderia pseudomallei 1710b] gi|254220491|gb|EET09875.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 1710a] Length = 468 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 +P+ A + + EL++ + C LC +T+ E D Sbjct: 255 EPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 314 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169 M++G P ++++ G+PF G+ G +LD ML+++ + R ++I+ + PPGNRN Sbjct: 315 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 374 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E+ C P + RQ+ L+ PK+++ +G D G+ +P + Sbjct: 375 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 429 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 T HP L++ K W L ++ Sbjct: 430 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 460 >gi|296134223|ref|YP_003641470.1| phage SPO1 DNA polymerase-related protein [Thermincola sp. JR] gi|296032801|gb|ADG83569.1| phage SPO1 DNA polymerase-related protein [Thermincola potens JR] Length = 197 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 5/193 (2%) Query: 69 SIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128 + + L +L L R C L + + DLM IG P ++ G PF Sbjct: 8 AAIENCSDLEQLSLLARDCCRCGLRAGCRGVVFGKGNPDADLMFIGEGPGAEEDRQGLPF 67 Query: 129 SGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188 G G +LDK++ + +++I+ I PPGNR + E + C+P + +QI LI PK Sbjct: 68 VGAAGQLLDKIILAGGWQLNEVYIANIVKCRPPGNRTPAPQEADACKPWLEKQIALIKPK 127 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW 248 I++ +G+ + + ++ G+W + I + T HP L++ P K+ W Sbjct: 128 IIVLLGSVAIQNIID-RGARITRDRGRWYE----KNGIRIMPTFHPAALLRDPAKKRPVW 182 Query: 249 HALITLKKALKNL 261 + ++ +L Sbjct: 183 EDIKKVRALYDSL 195 >gi|237812834|ref|YP_002897285.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei MSHR346] gi|237502848|gb|ACQ95166.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei MSHR346] Length = 468 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 +P+ A + + EL++ + C LC +T+ E D Sbjct: 255 EPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 314 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169 M++G P ++++ G+PF G+ G +LD ML+++ + R ++I+ + PPGNRN Sbjct: 315 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 374 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E+ C P + RQ+ L+ PK+++ +G D G+ +P + Sbjct: 375 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 429 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 T HP L++ K W L ++ Sbjct: 430 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 460 >gi|254247860|ref|ZP_04941181.1| Uracil-DNA glycosylase [Burkholderia cenocepacia PC184] gi|124872636|gb|EAY64352.1| Uracil-DNA glycosylase [Burkholderia cenocepacia PC184] Length = 343 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 92/257 (35%), Gaps = 22/257 (8%) Query: 20 ADSGVYW----VFDEPNNEATYESQRKEKSIDSAI------------QPITNIRHIHSPL 63 D+GV D P A + + Sbjct: 79 RDAGVSAHGLVEGDRPPVRAASPASTDTMPPKDDVPPAADDDFAWFDAAPPGESVPVPLA 138 Query: 64 VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123 + L + + C LC +T+ D M+IG P ++++ Sbjct: 139 ESRPAGTPVAVLDWDALAARVADCTLCRLCEKRTNTVFGVGDREADWMLIGEAPGENEDK 198 Query: 124 SGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQI 182 G+PF G+ G +LD MLQS+ + R ++I+ + PPGNRN E+ C P + RQ+ Sbjct: 199 QGEPFVGQAGKLLDNMLQSLALKRGDNVYIANVIKCRPPGNRNPEPDEVASCEPYLQRQV 258 Query: 183 ELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL 242 L+ PK+++ +G DA G+ +P + T HP L++ Sbjct: 259 ALVKPKLIVALGRFAAQTLLKTDASIAS-LRGRVHAYE----GVPVIVTYHPAYLLRSLQ 313 Query: 243 IKKNTWHALITLKKALK 259 K W L + K Sbjct: 314 DKSKAWADLCLARDTFK 330 >gi|328950429|ref|YP_004367764.1| phage SPO1 DNA polymerase-related protein [Marinithermus hydrothermalis DSM 14884] gi|328450753|gb|AEB11654.1| phage SPO1 DNA polymerase-related protein [Marinithermus hydrothermalis DSM 14884] Length = 205 Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats. Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 11/192 (5%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 +L EL + ++ C L + + LMI+G P ++ G+PF GK G + Sbjct: 2 TLEELAAKAQACTACRLAEGRHTVVFGEGDPDAQLMIVGEGPGADEDAQGRPFVGKAGQL 61 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP-IIMRQIELISPKILLFIG 194 L+++L++ I R ++I+ I PPGNRN E +IC + +QIELI P+I+ +G Sbjct: 62 LNRILEAAGIPRESVYIANIVKCRPPGNRNPLPDEAKICTGLWLSKQIELIRPQIIAPLG 121 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWH 249 + +F + G W I HP L++ P K TW Sbjct: 122 SVAAQYFLGEK-ISITKVRGNWYEW----HGIKIFPMFHPAYLLRNPSRAPGSPKALTWR 176 Query: 250 ALITLKKALKNL 261 + LKK L L Sbjct: 177 DIQELKKTLDAL 188 >gi|226198966|ref|ZP_03794529.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei Pakistan 9] gi|225929066|gb|EEH25090.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei Pakistan 9] Length = 457 Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 +P+ A + + EL++ + C LC +T+ E D Sbjct: 244 EPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 303 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169 M++G P ++++ G+PF G+ G +LD ML+++ + R ++I+ + PPGNRN Sbjct: 304 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 363 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E+ C P + RQ+ L+ PK+++ +G D G+ +P + Sbjct: 364 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 418 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 T HP L++ K W L ++ Sbjct: 419 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 449 >gi|308271358|emb|CBX27966.1| hypothetical protein N47_G32900 [uncultured Desulfobacterium sp.] Length = 228 Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 43/185 (23%), Positives = 85/185 (45%), Gaps = 5/185 (2%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 +L ++S L C L + + T L +G P +++ G+PF G+ G Sbjct: 48 DNLDSIRSELGECKRCKLSGGRTNIVFGTGNPNARLAFVGEGPGYDEDVKGEPFVGRAGQ 107 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 +L K++++I + R +++I I PP NRN E++ C P + RQ++ I+P + +G Sbjct: 108 LLTKIIEAINLTRDEVYICNIIKCRPPSNRNPEPDEIKACFPFLKRQLDAIAPDFICALG 167 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 + + + + G+ + + + T HP L++ P K++ W + L Sbjct: 168 TFAAQTLLDTN-EPISKLRGRLFDY----RGMQVMPTYHPAYLLRSPEKKRDVWEDMKKL 222 Query: 255 KKALK 259 +K Sbjct: 223 IGMMK 227 >gi|207743281|ref|YP_002259673.1| uracil-dna glycosylase-related protein [Ralstonia solanacearum IPO1609] gi|206594678|emb|CAQ61605.1| uracil-dna glycosylase-related protein [Ralstonia solanacearum IPO1609] Length = 277 Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 52/241 (21%), Positives = 95/241 (39%), Gaps = 11/241 (4%) Query: 26 WVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSP-----LVQQADSIAQKACSLHEL 80 V DEP + + + S +P + + A +L Sbjct: 38 AVADEPAPFIIEPPVIEPRVVVSEAEPPPMAPPAAPVADIPVAPELPRAQRIAAFDWAQL 97 Query: 81 KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML 140 ++ + C LC T+ D M+IG P + ++ G+PF G+ G +LD ML Sbjct: 98 EAAVSGCTACKLCERRTQTVFGVGDRQADWMLIGEAPGEQEDRQGEPFVGQAGKLLDSML 157 Query: 141 QSIEIMRTQ-IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199 +++ + R + I+ + PPGNR+ E+ +C P + RQI L+ P++++ +G Sbjct: 158 RAVGLSRETGVFIANVLKCRPPGNRDPEPDEVAMCDPYLKRQIALVKPRVIIVLGRFPAQ 217 Query: 200 FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 + G+ + +P + T HP L++ K W L +K Sbjct: 218 SLLQ-TQTPVGKLRGRVHEV----DGVPVVVTYHPAYLLRTLTDKARAWEDLCLARKVYA 272 Query: 260 N 260 Sbjct: 273 E 273 >gi|167570399|ref|ZP_02363273.1| putative phage-related DNA polymerase [Burkholderia oklahomensis C6786] Length = 311 Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 6/207 (2%) Query: 55 NIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIG 114 + A + EL++ + C LC +T+ E D M+IG Sbjct: 102 PALPDVAAKPAAASEPSVAELGWDELRARVADCRRCRLCEKRTNTVFGVGDERADWMLIG 161 Query: 115 YTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEI 173 P ++++ G+PF G+ G +LD ML+++ + R ++I+ + PPGNRN E+ Sbjct: 162 EAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPDEVAR 221 Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 C P + RQ+ L+ PK+++ +G DA G+ +P + T H Sbjct: 222 CEPYLQRQVALVKPKLIVALGRFAAQTLLKTDASIAS-MRGRVHQYE----GVPVIVTYH 276 Query: 234 PQELIQYPLIKKNTWHALITLKKALKN 260 P L++ K W L A +N Sbjct: 277 PAYLLRSLQDKAKAWSDLCLANDAYRN 303 >gi|124265496|ref|YP_001019500.1| putative DNA polymerase-like protein [Methylibium petroleiphilum PM1] gi|124258271|gb|ABM93265.1| putative DNA polymerase-related protein, bacteriophage-type [Methylibium petroleiphilum PM1] Length = 260 Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 55/252 (21%), Positives = 104/252 (41%), Gaps = 17/252 (6%) Query: 19 YADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQ-KACSL 77 A+ G+ V+ P A+ K ++ S + + + V + +A Sbjct: 11 LAEMGIR-VWQAPAAAASPVIDAKVEAAVSPVAAASPAPVVPRVAVARGARPEDVEAMDW 69 Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 L++ + C LC +T+ M++G P + ++ G+PF GK G +LD Sbjct: 70 PTLRAAVAGCTACGLCRGRTNTVFGVGHTQAHWMVVGEAPGEQEDRLGEPFVGKAGQLLD 129 Query: 138 KMLQSIEIMR----------TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP 187 MLQ++ + R Q++I+ + PP NRN E+ C P + RQ+ L+ P Sbjct: 130 HMLQALGLTRRAEGEGLQPAQQVYIANVLKCRPPMNRNPQPEEVAQCEPYLARQVALLQP 189 Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247 +++L +G + + G+ +P + T HP L++ P K Sbjct: 190 RLILAMGRFAVQSLLQ-TGEPIGRLRGRIHQYQ----GVPAIVTYHPAYLLRNPADKAKA 244 Query: 248 WHALITLKKALK 259 W L ++ ++ Sbjct: 245 WDDLCLAREVMR 256 >gi|78044945|ref|YP_359051.1| uracil-DNA glycosylase [Carboxydothermus hydrogenoformans Z-2901] gi|77997060|gb|ABB15959.1| uracil-DNA glycosylase, family 4 [Carboxydothermus hydrogenoformans Z-2901] Length = 198 Score = 184 bits (468), Expect = 7e-45, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 5/187 (2%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L LK + C+L + + + E LM++G P ++ G+PF G G Sbjct: 2 EELKALKEEALACQRCNLRAHAQRVVFGEGNEKALLMLVGEGPGAEEDRQGRPFVGAAGE 61 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 +L+K+L++ I R +++I + PP NR + E+ CR + RQIELI PKI++ +G Sbjct: 62 LLNKILEAAGISREEVYIGNVVKCRPPNNRVPTREEVAACRTFLDRQIELIKPKIIVCLG 121 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 D + + G W I + T HP L++ P K+ W + Sbjct: 122 ATAAQTLIGPD-VRITKIRGLWHE----KGEIKIMPTFHPAALLRDPTKKRPAWEDFQKV 176 Query: 255 KKALKNL 261 + L Sbjct: 177 RDLYFAL 183 >gi|310814870|ref|YP_003962834.1| phage SPO1 DNA polymerase-related protein [Ketogulonicigenium vulgare Y25] gi|308753605|gb|ADO41534.1| phage SPO1 DNA polymerase-related protein [Ketogulonicigenium vulgare Y25] Length = 263 Score = 184 bits (468), Expect = 9e-45, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 111/258 (43%), Gaps = 19/258 (7%) Query: 14 TIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQ 72 + + + G D+P + + + + + I + + + D+ A+ Sbjct: 12 EMLAWLVEMGADEAIADQPVDRYALPGESPKIAAPAPIAAPEKPKAARLGPLPEVDAPAE 71 Query: 73 KA------CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126 A +L +L S++ F C L + S + + +MI+G P ++ +G+ Sbjct: 72 AAALAASAQNLEQLASVMEGFDLCALKQGARSFVFSDGDPAARVMIVGEAPGREEDRAGR 131 Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIH------ISMISPWHPPGNRNLSNIEMEICRPIIMR 180 PF G+ G +LD+M +I + R+ I+ + PW PP NR S+ E+ + P + R Sbjct: 132 PFVGRAGQLLDRMFGAIGLSRSAPMADQAVYIANVLPWRPPENRTPSDTEIAMMLPFLQR 191 Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 IEL P+ L+ +GN + G W+ + + P L HP L++ Sbjct: 192 HIELADPEYLVLMGNTPCKALLGQAG--ILRLRGNWAEV----TGRPALPMTHPAYLLRE 245 Query: 241 PLIKKNTWHALITLKKAL 258 P K+ W L++LK L Sbjct: 246 PGAKREAWADLLSLKARL 263 >gi|53803655|ref|YP_114693.1| phage SPO1 DNA polymerase-like protein [Methylococcus capsulatus str. Bath] gi|53757416|gb|AAU91707.1| phage SPO1 DNA polymerase-related protein [Methylococcus capsulatus str. Bath] Length = 243 Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats. Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 6/216 (2%) Query: 45 SIDSAIQPITNIRHIHSPLVQQADSIAQK-ACSLHELKSLLRSFHDCHLCSTSLSTICAT 103 + S P P + L + + + C L T T+ Sbjct: 25 KLRSQPVPAAEPAADAFPSPPGRRECEGPDEENWDRLAAEVAACTRCELHLTRTQTVFGV 84 Query: 104 QTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGN 163 M+IG P + +++ G+PF G+ G +L++ML++I + R +++I+ I PP N Sbjct: 85 GNRRATWMVIGEAPGEQEDLQGEPFVGRAGQLLNEMLRAIGLKREEVYIANILKCRPPRN 144 Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH 223 R+ E C + RQI LI P+I+L G + + + G+ Sbjct: 145 RDPKPEEAAACESYLKRQIALIRPRIILAAGRIAAQNLLKST-ETIGKLRGRVHRYEN-- 201 Query: 224 SIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 IP + T HP L++ PL K+ W L+ + L Sbjct: 202 --IPLVITYHPAYLLRAPLEKRKAWQDLLLAVETLN 235 >gi|107028777|ref|YP_625872.1| phage SPO1 DNA polymerase-related protein [Burkholderia cenocepacia AU 1054] gi|116690064|ref|YP_835687.1| phage SPO1 DNA polymerase-related protein [Burkholderia cenocepacia HI2424] gi|105897941|gb|ABF80899.1| phage SPO1 DNA polymerase-related protein [Burkholderia cenocepacia AU 1054] gi|116648153|gb|ABK08794.1| phage SPO1 DNA polymerase-related protein [Burkholderia cenocepacia HI2424] Length = 346 Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 88/240 (36%), Gaps = 11/240 (4%) Query: 26 WVFDEPNNEATYESQRKEKSIDSAI-----QPITNIRHIHSPLVQQADSIAQKACSLHEL 80 P + T + + + L Sbjct: 99 ASITSPASTDTMPPKDEAPPAGDDDFAWFDAAPPGESVPVPAAESRPAGAPVAVLDWDAL 158 Query: 81 KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML 140 + + C LC +T+ D M+IG P ++++ G+PF G+ G +LD ML Sbjct: 159 AARVADCTLCRLCEKRTNTVFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLLDNML 218 Query: 141 QSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199 QS+ + R ++I+ + PPGNRN E+ C P + RQ+ L+ PK+++ +G Sbjct: 219 QSLALKRGDNVYIANVIKCRPPGNRNPEPDEVASCEPYLQRQVALVKPKLIVALGRFAAQ 278 Query: 200 FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 DA G+ +P + T HP L++ K W L + K Sbjct: 279 TLLKTDASIAS-LRGRVHAYE----GVPVIVTYHPAYLLRSLQDKSKAWADLCLARDTFK 333 >gi|83313537|ref|YP_423801.1| Uracil-DNA glycosylase [Magnetospirillum magneticum AMB-1] gi|82948378|dbj|BAE53242.1| Uracil-DNA glycosylase [Magnetospirillum magneticum AMB-1] Length = 254 Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats. Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 3/222 (1%) Query: 42 KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTIC 101 ++ + S L A +A L L+ + F L + ST+ Sbjct: 32 RQPRPHAEPMAAPPGALSASALPGTAAHLAAGCADLQALRHAMEGFEGLQLKQAASSTVF 91 Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 +M IG P ++ G PF G +G +LD+ML SI + R+ +I+ + PW PP Sbjct: 92 GDGNPESAVMCIGEAPGQEEDRRGLPFVGPSGKLLDRMLGSIGLDRSTCYITNVVPWRPP 151 Query: 162 GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221 NR + E+ +C P + R IEL+ P++L+ +G + A + G+W + Sbjct: 152 ANRKPTPDEVAVCMPFLTRHIELVDPQVLILLGGASAAAV-LAKADGINRLRGRWFEFNS 210 Query: 222 PH--SIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 P IP LAT HP L++ P K++ W L+ +++ + + Sbjct: 211 PGLPRPIPALATFHPAYLLRTPEAKRDAWRDLLMIRRRMDAV 252 >gi|114567385|ref|YP_754539.1| Uracil-DNA glycosylase-like protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338320|gb|ABI69168.1| Uracil-DNA glycosylase-like protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 233 Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats. Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 7/214 (3%) Query: 50 IQPITNIRHIHSPLVQ--QADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEG 107 + + I SP + + + + L+ L R+ ++C L S + + Sbjct: 20 QEKQVAAKEIRSPFLPGIKVEEAFPGIKEVALLEELARNCNNCRLRSGCRQVVFSDGDVK 79 Query: 108 QDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLS 167 +M IG P ++ G+PF GK G +LDK+L + EI R+Q++IS + PPGNR + Sbjct: 80 SRIMFIGEGPGKDEDEQGRPFVGKAGQLLDKILVAAEIPRSQVYISNVVKCRPPGNRLPN 139 Query: 168 NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227 E+ CR + QI ++ P I++ +G + A + GKW N + Sbjct: 140 PDEVRECRNYLEAQIRIMQPAIIVCLGAMASQVVIDPKASV-SKIRGKWFN----RQGVK 194 Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 +AT HP L++ P K+ W ++ + Sbjct: 195 IMATYHPAALLRNPSYKRPAWQDFQMIRDEYNKV 228 >gi|149194079|ref|ZP_01871177.1| Uracil-DNA glycosylase [Caminibacter mediatlanticus TB-2] gi|149136032|gb|EDM24510.1| Uracil-DNA glycosylase [Caminibacter mediatlanticus TB-2] Length = 214 Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats. Identities = 49/186 (26%), Positives = 93/186 (50%), Gaps = 6/186 (3%) Query: 74 ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 L EL+++ ++ C L T + + LM IG P + ++ +G+PF G+ G Sbjct: 34 PNELKELENICKNCTLCDLSKTRTNIVFGEGNPKAKLMFIGEGPGEMEDKTGRPFVGRAG 93 Query: 134 NMLDKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192 +L K+++++ E+ R ++I+ I PP NR + E E C+P +++QI++I+PKIL+ Sbjct: 94 KLLTKIIENVLELSREDVYIANIVKCRPPNNRVPTIEEAESCKPYLIKQIDIINPKILVC 153 Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 +G + N+ + G+ + T HP L++ P KK + + Sbjct: 154 LGKTAF-MYLMNNNIPISKIRGQIFEY----KGKKVIPTYHPSFLLRNPSAKKEAYKDFL 208 Query: 253 TLKKAL 258 +K+ L Sbjct: 209 LIKELL 214 >gi|193213467|ref|YP_001999420.1| phage SPO1 DNA polymerase-related protein [Chlorobaculum parvum NCIB 8327] gi|193086944|gb|ACF12220.1| phage SPO1 DNA polymerase-related protein [Chlorobaculum parvum NCIB 8327] Length = 207 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 5/201 (2%) Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120 P+ +Q A A L L +++ C L T S + + +IG P Sbjct: 8 DPVPEQPKQQAVPALDLGSLGKVVQECRKCRLAETRNSVVFGEGNPKARVFVIGEAPGAD 67 Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180 ++ G+PF G++G +LDK+L +I R+ ++I I PP NRN E+E C+P +M+ Sbjct: 68 EDAQGRPFVGRSGQLLDKILLAIGFERSDVYIGNIIKCRPPQNRNPLGDEIECCKPWLMQ 127 Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 Q+E+I P I+L +G N + GK + T HP L++ Sbjct: 128 QLEIIKPNIILLLGRVAANTIL-ENTLSMSAMRGKL----IRWNGFDCFVTYHPAALLRN 182 Query: 241 PLIKKNTWHALITLKKALKNL 261 P K+ W + L+ + Sbjct: 183 PNWKRLCWEDVQLLRAHYDKV 203 >gi|82703240|ref|YP_412806.1| phage SPO1 DNA polymerase-related protein [Nitrosospira multiformis ATCC 25196] gi|82411305|gb|ABB75414.1| phage SPO1 DNA polymerase-related protein [Nitrosospira multiformis ATCC 25196] Length = 271 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 61/244 (25%), Positives = 102/244 (41%), Gaps = 12/244 (4%) Query: 25 YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKAC------SLH 78 D + +Q + + + + + P + +A+K Sbjct: 29 ECTEDGNPSRTPESAQVMVAPVVAPSEFEEQVEQVCVPSANATEDVAEKRRAMILRMEWD 88 Query: 79 ELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDK 138 +LK + C LCS+ T+ D + +G P ++ G+PF G+ G +LD Sbjct: 89 QLKESVEGCVACRLCSSRTRTVFGVGDPNADWLYVGEGPGAQEDALGEPFVGQAGKLLDN 148 Query: 139 MLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197 ML +I + R + I+ I PPGNR S+ E + C P + RQIELI P++++ +G Sbjct: 149 MLMAIGLKRGRDVFIANIVKCRPPGNREPSDDEAQCCEPYLARQIELIKPRLIVALGKTA 208 Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKA 257 N DA GK H IP + T HP L++ + K W L ++ Sbjct: 209 ARNLLNTDASIGS-LRGKLH----QHEGIPVIVTYHPAYLLRTLVAKAKAWEDLCFAQRT 263 Query: 258 LKNL 261 ++ L Sbjct: 264 MQAL 267 >gi|294085230|ref|YP_003551990.1| phage SPO1 DNA polymerase-like protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292664805|gb|ADE39906.1| phage SPO1 DNA polymerase-related protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 317 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 68/308 (22%), Positives = 121/308 (39%), Gaps = 51/308 (16%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVF-------------------------------- 28 M+++ + +Q++T + A+ GV F Sbjct: 1 MSNQSAATIQQLITQLAWQAEMGVDEAFLGAEALAMPKVKLDKYLPSSIAAAPEAIATTP 60 Query: 29 ----------DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSP-LVQQADSIAQKACSL 77 AT ++ P+ P A A L Sbjct: 61 DDSARHSASVMSAPKAATLSGAMPMQTPPMQTPPMQTPPMQTPPMQTPPAQISGPDAPDL 120 Query: 78 HEL------KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 + K+ L +F C L T+ + + A G LMIIG P +++ G PF G Sbjct: 121 AAIGSLAALKAGLLAFEGCALKHTASNLVFADGNPGARLMIIGEAPGRDEDMVGLPFVGV 180 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191 +G +LDKML SI + R+ ++I+ + PW PPGNR + E + P + R ++L +P +L Sbjct: 181 SGQLLDKMLASIGLDRSHVYIANLLPWRPPGNRTPTTEETAMMLPWLRRHVQLANPDYIL 240 Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS-IIPTLATVHPQELIQYPLIKKNTWHA 250 +G + + G+W ++ + PTLA++HP L++ P K+ ++ Sbjct: 241 ILGGSAAKAVLDTK-DGILKLRGRWQDVDFGDAITRPTLASLHPAYLLRSPAQKRLSFAD 299 Query: 251 LITLKKAL 258 ++ + L Sbjct: 300 MLAVNSRL 307 >gi|254179296|ref|ZP_04885895.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 1655] gi|184209836|gb|EDU06879.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 1655] Length = 463 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 +P+ A + + EL++ + C LC +T+ E D Sbjct: 250 EPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 309 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169 M++G P ++++ G+PF G+ G +LD ML+++ + R ++I+ + PPGNRN Sbjct: 310 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 369 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E+ C P + RQ+ L+ PK+++ +G D G+ +P + Sbjct: 370 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 424 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 T HP L++ K W L ++ Sbjct: 425 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 455 >gi|170702440|ref|ZP_02893325.1| phage SPO1 DNA polymerase-related protein [Burkholderia ambifaria IOP40-10] gi|170132643|gb|EDT01086.1| phage SPO1 DNA polymerase-related protein [Burkholderia ambifaria IOP40-10] Length = 349 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 55/231 (23%), Positives = 91/231 (39%), Gaps = 6/231 (2%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P AT + D A P + + L + + C Sbjct: 112 PAPSATADDMPPATEDDFAWFDAAPPGDPLPPDEPRPAATPVAMLDWETLAARVADCTSC 171 Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQ 149 LC +T+ D M+IG P ++++ G+PF G+ G +LD MLQS+ + R Sbjct: 172 RLCEKRTNTVFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLLDNMLQSLALKRGEN 231 Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209 ++I+ + PPGNRN E+ C P + RQ+ L+ PK+++ +G DA Sbjct: 232 VYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDASIA 291 Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 G+ +P + T HP L++ K W L + + Sbjct: 292 S-LRGRVHTYE----GVPVIVTYHPAYLLRSLQDKSKAWADLCLARDTFQQ 337 >gi|313672976|ref|YP_004051087.1| phage spo1 DNA polymerase-related protein [Calditerrivibrio nitroreducens DSM 19672] gi|312939732|gb|ADR18924.1| phage SPO1 DNA polymerase-related protein [Calditerrivibrio nitroreducens DSM 19672] Length = 226 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 48/204 (23%), Positives = 92/204 (45%), Gaps = 5/204 (2%) Query: 57 RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYT 116 P + K + ++ + S C L T L+ + ++M IG Sbjct: 28 TDKSIPSPSLNLQNSSKFEQMQKIIEEVSSCFKCILGKTRLNVVPGEGNLDAEIMFIGEG 87 Query: 117 PSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP 176 P + ++ G+PF G+ G +L KM++++ R +++I+ I PP NR + E C Sbjct: 88 PGEDEDRQGRPFVGRAGQLLTKMIEAMGYKREEVYIANIVKCRPPNNRAPFDEEAFACIG 147 Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236 + +QIE+++PK+++ +G+ + N D + + G++ I + T HP Sbjct: 148 YVKKQIEIVNPKVIVTLGSTATRYLLNTDKKIST-IRGEFQEYN----GIKVMPTFHPSY 202 Query: 237 LIQYPLIKKNTWHALITLKKALKN 260 L++ +KK W L + LK Sbjct: 203 LLRNQSMKKPAWEDLKKVIAFLKK 226 >gi|134296052|ref|YP_001119787.1| phage SPO1 DNA polymerase--like protein [Burkholderia vietnamiensis G4] gi|134139209|gb|ABO54952.1| phage SPO1 DNA polymerase-related protein [Burkholderia vietnamiensis G4] Length = 342 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 57/227 (25%), Positives = 91/227 (40%), Gaps = 6/227 (2%) Query: 35 ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94 A+ D A T P +AD L + + C LC Sbjct: 109 ASASDMPLAAEDDFAWFDATPPGDPLPPAEMRADVAPVATLDWDALAARVAGCTSCRLCE 168 Query: 95 TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHIS 153 T+ D M+IG P ++++ G+PF G+ G +LD MLQS+ + R T ++I+ Sbjct: 169 KRTQTVFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLLDNMLQSLTLARGTNVYIA 228 Query: 154 MISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL 213 + PPGNRN E+ C P + RQ+ L+ PK+++ +G DA Sbjct: 229 NVIKCRPPGNRNPEPDEVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDASIAS-LR 287 Query: 214 GKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 G+ +P + T HP L++ K W L + + Sbjct: 288 GRVHAYE----GVPVIVTYHPAYLLRSLQDKSKAWADLCLARDTFRQ 330 >gi|332980856|ref|YP_004462297.1| phage SPO1 DNA polymerase-like protein [Mahella australiensis 50-1 BON] gi|332698534|gb|AEE95475.1| phage SPO1 DNA polymerase-related protein [Mahella australiensis 50-1 BON] Length = 189 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 5/182 (2%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L L + + C L + T+ LM +G P +++ G+PF G+ G +L Sbjct: 6 LKPLMEEVANCTKCPLAQSRTHTVFGEGNLNARLMFVGEGPGKDEDLQGRPFVGRAGQLL 65 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 D ML++I I R++++I+ + PP NR + E + C P + Q+ +I PKI++ +G Sbjct: 66 DNMLEAIGIKRSEVYIANVVKCRPPQNRVPTPSEAKACLPYLRNQVAIIKPKIIVCLGAT 125 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 + D K Q G+W +AT HP +++ P KK W I +K+ Sbjct: 126 AAKNLIDPD-FKITQQRGQWIE----RKGYYFIATFHPAAILRDPSKKKPAWEDFILIKE 180 Query: 257 AL 258 Sbjct: 181 KY 182 >gi|315186692|gb|EFU20451.1| phage SPO1 DNA polymerase-related protein [Spirochaeta thermophila DSM 6578] Length = 253 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 56/259 (21%), Positives = 107/259 (41%), Gaps = 18/259 (6%) Query: 2 TSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHS 61 S++ L +++ F + V+ ++ P+ + ++ P+ S Sbjct: 1 MSEQDL-YKELWE-LSFLVEDLVHGGWERPH--------PEPPTVPGEAPPLVAGSGERS 50 Query: 62 PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121 A +L L +R+ + C L T + T G +M++G P + Sbjct: 51 EGKPTGGD--DPARTLGALHEQVRACNRCDLARTRRQAVPGTGRVGLPVMVVGEAPGADE 108 Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180 ++ G+PF G+ G LDK L +I + R + I+ + PPGNR+ E+ C P + Sbjct: 109 DVKGEPFVGRAGQYLDKWLAAIGLQRGRDVFITNVVKCRPPGNRDPRPDEISACLPFLEA 168 Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 QI L+ P+ +L +G + + + G+ IP + T HP +++ Sbjct: 169 QIALVRPRAILTVGRFAASTLLG-TQEGISRLRGRVYRY----RDIPLVPTYHPSAVLRD 223 Query: 241 PLIKKNTWHALITLKKALK 259 P +++ W L L L+ Sbjct: 224 PSLRRPVWEDLKLLSSVLR 242 >gi|187924459|ref|YP_001896101.1| phage SPO1 DNA polymerase-related protein [Burkholderia phytofirmans PsJN] gi|187715653|gb|ACD16877.1| phage SPO1 DNA polymerase-related protein [Burkholderia phytofirmans PsJN] Length = 414 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 52/239 (21%), Positives = 91/239 (38%), Gaps = 16/239 (6%) Query: 29 DEPNNEATYESQRKEKSIDSAIQPIT----------NIRHIHSPLVQQADSIAQKACSLH 78 +EP + Q+ + ++ A Sbjct: 167 NEPQTPQSSRPQQPRSPEPPTFDAPPSDDFAWFDDLPTQAPADARLEAPAPPAIHTLDWD 226 Query: 79 ELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDK 138 L + + C LC +T+ G D M+IG P ++++ G+PF G+ G +LD Sbjct: 227 ALSERVAACQLCRLCEKRTNTVFGVGDRGADWMLIGEAPGENEDRLGEPFVGQAGKLLDN 286 Query: 139 MLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197 ML+S+ + R +I+ + PPGNRN E+ C P + RQ+ L+ PK+++ +G Sbjct: 287 MLRSLTLARDTNVYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVALVKPKLIVALGRFA 346 Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 +A G+ +P + T HP L++ K W L + Sbjct: 347 AQSLLKTEA-SISSLRGRVHEYE----GVPVIVTYHPAYLLRSLPDKAKAWADLCLARD 400 >gi|258517054|ref|YP_003193276.1| phage SPO1 DNA polymerase-related protein [Desulfotomaculum acetoxidans DSM 771] gi|257780759|gb|ACV64653.1| phage SPO1 DNA polymerase-related protein [Desulfotomaculum acetoxidans DSM 771] Length = 191 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 49/191 (25%), Positives = 77/191 (40%), Gaps = 6/191 (3%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 +K ++LK C L + + G +M IG P ++ G+PF G+ Sbjct: 3 EKIKLWNDLKEKCLQCTGCALSEKRTNVVFGEGYIGAGIMFIGEGPGQQEDEQGRPFVGR 62 Query: 132 TGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 G +LDKML +I + R I + PPGNR E C P + Q+ +I P+I+ Sbjct: 63 AGVLLDKMLDAIGLSRHTNAMICNVVKCRPPGNRVPDRQEAAACLPFLRAQVAIIKPRII 122 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 + +G + Q G+W +AT HP L++ P K W Sbjct: 123 VCLGATAVKHVLD-TVSGITQIRGQWYE----KKGYWMIATFHPAALLRDPAKKVLVWED 177 Query: 251 LITLKKALKNL 261 L ++ L Sbjct: 178 LKAIRAKYDEL 188 >gi|299139044|ref|ZP_07032221.1| phage SPO1 DNA polymerase-related protein [Acidobacterium sp. MP5ACTX8] gi|298599198|gb|EFI55359.1| phage SPO1 DNA polymerase-related protein [Acidobacterium sp. MP5ACTX8] Length = 332 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 49/224 (21%), Positives = 94/224 (41%), Gaps = 6/224 (2%) Query: 36 TYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHL-CS 94 + S + P +PL Q A++ +L +++ + C L + Sbjct: 106 SEPSPLNLPPELAVPMPKPVSFDQLAPLPTQILPAAERPAALEAIRADIGDCTRCPLAYA 165 Query: 95 TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154 + + A LM +G P ++ SG PF GK G +L+ M++++ + R +++I+ Sbjct: 166 GRHTIVFADGDPNAKLMFVGEGPGADEDASGLPFVGKAGQLLNNMIKAMGLQREEVYIAN 225 Query: 155 ISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLG 214 I PPGNR IE C ++RQI+++ P++++ +G + G Sbjct: 226 IVKCRPPGNRTPEPIEANTCSQFLLRQIDIVRPQVIVALGGTAATYLLGVKQSL-SSLRG 284 Query: 215 KWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 +W + + T HP L++ P K W L + + Sbjct: 285 RWHST----RGSKLVVTYHPAFLLRDPRQKGEAWKDLQMVMAEM 324 >gi|304315599|ref|YP_003850744.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777101|gb|ADL67660.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 185 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 5/185 (2%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L +L + C L + + + +M IG P ++I G+PF GK G +L Sbjct: 6 LKQLMEECMNCTKCPLHNVRNNVVFGEGNLRSKIMFIGEGPGRDEDIQGRPFVGKAGQLL 65 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 +KM+++I++ R ++I+ I PP NR E++ C P + Q+ +I+PKI++ +G Sbjct: 66 NKMIEAIDLKREDVYIANIVKCRPPNNRVPLQNEVDACLPYLRNQVAIIAPKIIVCLGAT 125 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 + K GKW + +AT HP L++ P K W ++K Sbjct: 126 AAKAIID-KNFKITVMRGKWIE----RKGVKIIATYHPAALLRDPEKKYPAWEDFKSIKN 180 Query: 257 ALKNL 261 L+ + Sbjct: 181 ELEKV 185 >gi|170733398|ref|YP_001765345.1| phage SPO1 DNA polymerase-related protein [Burkholderia cenocepacia MC0-3] gi|169816640|gb|ACA91223.1| phage SPO1 DNA polymerase-related protein [Burkholderia cenocepacia MC0-3] Length = 342 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 52/236 (22%), Positives = 86/236 (36%), Gaps = 12/236 (5%) Query: 31 PNNEATYESQRKEKSIDSAI------QPITNIRHIHSPLVQQADSIAQKACSLHELKSLL 84 P + E + L + + Sbjct: 99 PPASTDTMPPKDEAPPAGDDDFAWFDAAPPGESVPVPAAESRPAGTPVAVLDWDALAARV 158 Query: 85 RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIE 144 C LC +T+ D M+IG P ++++ G+PF G+ G +LD MLQS+ Sbjct: 159 ADCTLCRLCEKRTNTVFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLLDNMLQSLA 218 Query: 145 IMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 + R ++I+ + PPGNRN E+ C P + RQ+ L+ PK+++ +G Sbjct: 219 LKRGDNVYIANVIKCRPPGNRNPEPDEVASCEPYLQRQVALVKPKLIVALGRFAAQTLLK 278 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 DA G+ +P + T HP L++ K W L + K Sbjct: 279 TDASIAS-LRGRVHAYE----GVPVIVTYHPAYLLRSLQDKSKAWADLCLARDTFK 329 >gi|187477567|ref|YP_785591.1| uracil-DNA glycosylase [Bordetella avium 197N] gi|115422153|emb|CAJ48677.1| uracil-DNA glycosylase [Bordetella avium 197N] Length = 206 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 5/204 (2%) Query: 55 NIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIG 114 + A +A L L+ + + C LC + + M++G Sbjct: 4 ELAAPLGAGADTARRVADF--DLARLQQEVLACTACGLCQGRKHAVFGDGAQAARWMVVG 61 Query: 115 YTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEI 173 P + ++ G PF G++G +LD ML S+ + R Q I+ + PPGNRN E+ Sbjct: 62 EAPGEQEDRRGLPFVGRSGQLLDAMLASVGMSREQDVFIANVIKCRPPGNRNPKPEEIAA 121 Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP-HSIIPTLATV 232 C P +MRQI L+ P+ +L +G DA G+ L T IP + + Sbjct: 122 CSPYLMRQIALLRPERILVLGRFAAQTLLGTDA-AISSLRGRQHVLKTEAGREIPVVVSY 180 Query: 233 HPQELIQYPLIKKNTWHALITLKK 256 HP L++ P K W L ++ Sbjct: 181 HPAYLLRSPAEKARAWQDLQLARQ 204 >gi|291614685|ref|YP_003524842.1| phage SPO1 DNA polymerase-related protein [Sideroxydans lithotrophicus ES-1] gi|291584797|gb|ADE12455.1| phage SPO1 DNA polymerase-related protein [Sideroxydans lithotrophicus ES-1] Length = 245 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 51/230 (22%), Positives = 92/230 (40%), Gaps = 8/230 (3%) Query: 32 NNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLH--ELKSLLRSFHD 89 + + + + + + A +L+ +LK ++R Sbjct: 19 VRRGVPAEADVASLPAAHAETSQPALPVAEQPMLRQQTEPPPASTLNWTDLKRVVRDCSA 78 Query: 90 CHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-T 148 C L S T+ E + + +G P ++ G+PF G+ G +LD ML ++ + R Sbjct: 79 CKLRSGCTQTVFGVGDEKAEWLFVGEGPGADEDAQGEPFVGQAGKLLDNMLAALRLKRGD 138 Query: 149 QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQK 208 +++I+ I PP NR E+ C P + +QIELI PK+++ +G DA Sbjct: 139 KVYIANIVKCRPPNNRTPEPDEIATCMPYLQQQIELIKPKLIVALGKTAATSLLGRDATL 198 Query: 209 TYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 G + P + T HP L++ P K W L ++ + Sbjct: 199 GS-LRGTVHDY----HGTPLIVTYHPAYLLRSPAEKAKAWQDLCFARQRM 243 >gi|194333183|ref|YP_002015043.1| phage SPO1 DNA polymerase-like protein [Prosthecochloris aestuarii DSM 271] gi|194311001|gb|ACF45396.1| phage SPO1 DNA polymerase-related protein [Prosthecochloris aestuarii DSM 271] Length = 209 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 54/186 (29%), Positives = 83/186 (44%), Gaps = 5/186 (2%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 SL EL + ++ C L T + + +++IG P ++ G+PF G++G + Sbjct: 23 SLDELGAQSKNCTQCQLAETRQNVVFGEGNPQAKIVVIGEGPGAEEDAQGRPFVGRSGKL 82 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 LDK+LQSI R ++I I PP NRN E+E C P + Q+ELI P I+L +G Sbjct: 83 LDKILQSIGFDRNDVYICNIVKCRPPANRNPLAEEIEQCLPWLNAQLELIQPGIILLLGK 142 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 N N G + T HP L++ P K W + L+ Sbjct: 143 VAANTILQNKCSM-----GSMRGSIIRWGTYDVVVTYHPAALLRNPNWKYQCWEDVKMLR 197 Query: 256 KALKNL 261 K ++ Sbjct: 198 KHFDSM 203 >gi|188585122|ref|YP_001916667.1| phage SPO1 DNA polymerase-related protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179349809|gb|ACB84079.1| phage SPO1 DNA polymerase-related protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 195 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 58/186 (31%), Positives = 82/186 (44%), Gaps = 5/186 (2%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 L LK +CHL T + E D+M+IG P ++ +PF G G + Sbjct: 9 DLESLKKEALICKNCHLRETCNGVVFGEGDEQADIMLIGEGPGAKEDELQRPFVGPAGEL 68 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 L KML +I R ++I+ I PP NR + EM+ C PI+ +QI LI KI++ +G Sbjct: 69 LTKMLAAINFSRDDVYITNIVKCRPPNNRTPNQEEMDTCLPILRQQIRLIQSKIIVILGG 128 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 + K + G W I L T HP L++ P KK +W L LK Sbjct: 129 AALKGLID-KNMKITKARGSWLE----RKGIHILPTYHPAYLLRNPAKKKESWEDLQNLK 183 Query: 256 KALKNL 261 L Sbjct: 184 AKYMEL 189 >gi|21673047|ref|NP_661112.1| DNA polymerase [Chlorobium tepidum TLS] gi|21646115|gb|AAM71454.1| DNA polymerase, bacteriophage-type [Chlorobium tepidum TLS] Length = 208 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 5/201 (2%) Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120 P ++A L EL + C L T + + L +IG P Sbjct: 9 DPAPEEAAQPNSPLEGLGELCRITVECRKCRLAQTRKNVVFGEGNPQAGLFVIGEAPGAD 68 Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180 ++ G+PF G++G +LDK+L +I R ++I I PP NRN E++ C+P +M+ Sbjct: 69 EDAQGRPFVGRSGQLLDKILLAIGFERQDVYIGNIIKCRPPENRNPLADEIDCCKPWLMQ 128 Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 Q+ +I PK+LL +G N + Q G+ + T HP L++ Sbjct: 129 QLGIIKPKVLLLLGKVAANTIL-ENTQSMGLMRGRI----IKWKGFDCVVTYHPAALLRN 183 Query: 241 PLIKKNTWHALITLKKALKNL 261 P K+ W + L+ + Sbjct: 184 PNWKRLCWEDVQMLRAHYDKV 204 >gi|116747914|ref|YP_844601.1| phage SPO1 DNA polymerase-like protein [Syntrophobacter fumaroxidans MPOB] gi|116696978|gb|ABK16166.1| phage SPO1 DNA polymerase-related protein [Syntrophobacter fumaroxidans MPOB] Length = 264 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 48/214 (22%), Positives = 85/214 (39%), Gaps = 5/214 (2%) Query: 46 IDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQT 105 I+ ++ + + A L + L C L S + + Sbjct: 30 IEDWAAAWSDPAVGLPEPEKAIEQEPDPAGGLTVIAGELEGCRRCRLHSERTRIVFGEGS 89 Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRN 165 L+ +G P ++ G+PF G+ G +LD+M++++ R ++I + PP NR Sbjct: 90 AHAPLVFVGEGPGLEEDRQGRPFVGRAGRLLDQMIKALGFHREAVYICNVVKCRPPKNRT 149 Query: 166 LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI 225 + E+ C P ++RQIE I P+++ +G + G Sbjct: 150 PESEEIARCGPFLIRQIEAIRPRVICALGACAAQTLVG-TGSSISRLRGSVHYW----RG 204 Query: 226 IPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 IP + T HP L++ P K W LI ++ LK Sbjct: 205 IPLICTFHPAYLLRTPAQKAAAWEDLILVRDLLK 238 >gi|331000978|ref|ZP_08324615.1| uracil-DNA glycosylase, family 4 [Parasutterella excrementihominis YIT 11859] gi|329569937|gb|EGG51694.1| uracil-DNA glycosylase, family 4 [Parasutterella excrementihominis YIT 11859] Length = 324 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 2/227 (0%) Query: 33 NEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHL 92 N S R E + A + + R + +A LK L++ C + Sbjct: 98 NAPPPRSARPEPAAKPAYRSASEARGVRPEAYTEARIHQIATADWQTLKQLVQDCRACEI 157 Query: 93 CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-H 151 S+ L + LM+IG P ++ G+PF G +G +LDK+L++ ++ R + Sbjct: 158 SSSRLHPVFGQGYPPCRLMLIGEAPGAEEDRLGQPFVGPSGKLLDKILEAAKLDREKDLC 217 Query: 152 ISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQ 211 I PP N E CRP + RQIELI P++++ +G ++FF D + Sbjct: 218 IFNTLKCRPPLNATPEKAETMACRPFLERQIELIDPEVIVAMGKPAASWFF-PDLKTLNP 276 Query: 212 NLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 GK NL + T HP L++ P K+ W + L Sbjct: 277 YRGKVHNLTVQGKPRKVIVTYHPSYLLRSPQEKRKAWLDWCLILDTL 323 >gi|217970656|ref|YP_002355890.1| phage SPO1 DNA polymerase-related protein [Thauera sp. MZ1T] gi|217507983|gb|ACK54994.1| phage SPO1 DNA polymerase-related protein [Thauera sp. MZ1T] Length = 304 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 47/222 (21%), Positives = 81/222 (36%), Gaps = 6/222 (2%) Query: 40 QRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLST 99 + A A L++ +R C LC Sbjct: 86 PHRAARPQPAAASTPAAVRSAPAAPDPARGARISTLEWDALEAEIRDCKACGLCERRKQA 145 Query: 100 ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPW 158 + M++G P ++ G+PF G+ G +LD ML +I + R ++I+ Sbjct: 146 VPGVGDRQARWMLVGEAPGAEEDQRGEPFVGQAGRLLDNMLAAIGLKRGEDVYIANAVKC 205 Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218 PP NR E+ C+P + RQI L+ P++L+ +G + + GK Sbjct: 206 RPPHNRTPERGEIAACQPYLDRQIALVQPQLLVALGRPAAQALLDRE-IAISAARGKRFE 264 Query: 219 LCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 + P + T HP L++ P K W L ++ + Sbjct: 265 ----RAGTPVVVTYHPAYLLRNPQDKAKAWEDLCFARRLIAE 302 >gi|163856012|ref|YP_001630310.1| bacteriophage-related DNA polymerase [Bordetella petrii DSM 12804] gi|163259740|emb|CAP42041.1| bacteriophage-related DNA polymerase [Bordetella petrii] Length = 298 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 56/226 (24%), Positives = 88/226 (38%), Gaps = 4/226 (1%) Query: 30 EPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHD 89 P E A +P + A + + A L+ + Sbjct: 70 APVREQKPAPAGAPTPPRPAARPNVPVPAAREQAQPAAQPV-EPARDFDALREQVIQCAA 128 Query: 90 CHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQ 149 C LC+ + M++G P + ++ G PF G++G +LD ML S+ + R + Sbjct: 129 CGLCNGRRHAVFGMGGRPARWMVVGEAPGEQEDRQGLPFVGRSGQLLDAMLASVGLSREK 188 Query: 150 I-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQK 208 I+ + PPGNRN E+ C P +MRQIEL+ P+ +L +G DA Sbjct: 189 DVFIANVIKCRPPGNRNPKPEEIAACSPYLMRQIELLKPERILVLGRFAAQTLLGTDATI 248 Query: 209 TYQNLGKWSNLCTP-HSIIPTLATVHPQELIQYPLIKKNTWHALIT 253 G+ L IP + + HP L++ P K W L Sbjct: 249 GS-LRGRRHELAAEDGRKIPVVVSYHPAYLLRSPAEKARAWQDLRL 293 >gi|257457232|ref|ZP_05622407.1| DNA polymerase domain protein [Treponema vincentii ATCC 35580] gi|257445383|gb|EEV20451.1| DNA polymerase domain protein [Treponema vincentii ATCC 35580] Length = 299 Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 13/209 (6%) Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTE-------GQDLMII 113 + ADS S+ E+ + + C L T + E ++M+I Sbjct: 92 ADEDSPADSSGASFRSMQEIYAAVAQCSACVLGQTRTHPVAGEGPEELSRLTNSVEVMVI 151 Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRT-QIHISMISPWHPPGNRNLSNIEME 172 G P ++ G+PF G+ G +LDKML++I++ R +I+ + PP NR+ + E Sbjct: 152 GEGPGADEDRQGRPFVGRAGQLLDKMLEAIQLSRKTNCYITNVVKCRPPQNRDPAPEERN 211 Query: 173 ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATV 232 C + QI LI PK++L +G + + G++ + IP + T Sbjct: 212 CCAAFLDAQIRLIRPKMILVMGRIAAQHLLQ-TSDGIGKLRGRFFDYQ----GIPLMPTY 266 Query: 233 HPQELIQYPLIKKNTWHALITLKKALKNL 261 HP L++ +K+ W L + L L Sbjct: 267 HPSALLRDESLKRPAWEDLKRFRARLHEL 295 >gi|307719508|ref|YP_003875040.1| hypothetical protein STHERM_c18320 [Spirochaeta thermophila DSM 6192] gi|306533233|gb|ADN02767.1| hypothetical protein STHERM_c18320 [Spirochaeta thermophila DSM 6192] Length = 253 Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 102/259 (39%), Gaps = 18/259 (6%) Query: 2 TSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHS 61 S++ L +++ F + V+ ++ P + Sbjct: 1 MSEQDL-YKELWE-LSFLVEDLVHGGWERP----------HPAPPTVPAGAPPLVAGSGE 48 Query: 62 PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121 ++ A +L L +R+ + C L T + G +M++G P + Sbjct: 49 RSERKPTGGDDPARTLGALHEQVRACNRCDLARTRRHAVPGIGRVGLPVMVVGEAPGADE 108 Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180 ++ G+PF G+ G LDK L +I + R + I+ + PPGNR+ E+ C P + Sbjct: 109 DVKGEPFVGRAGQYLDKWLAAIGLQRGRDVFITNVVKCRPPGNRDPRPDEISACLPFLEA 168 Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 QI L+ P+ +L +G + + + G+ IP + T HP +++ Sbjct: 169 QIALVRPRAILTVGRFAASTLLG-TQEGISRLRGRVYRY----RDIPLVPTYHPSAVLRD 223 Query: 241 PLIKKNTWHALITLKKALK 259 P +++ W L L L+ Sbjct: 224 PSLRRPVWEDLKLLSSVLR 242 >gi|320449933|ref|YP_004202029.1| uracil-DNA glycosylase, family 4 [Thermus scotoductus SA-01] gi|320150102|gb|ADW21480.1| uracil-DNA glycosylase, family 4 [Thermus scotoductus SA-01] Length = 205 Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 11/192 (5%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 +L L++ ++ C L + LMI+G P + ++ +G+PF GK G + Sbjct: 2 TLELLQAQAKACTACRLAEGRTQVVFGEGNPDAQLMIVGEGPGEEEDKTGRPFVGKAGQL 61 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC-RPIIMRQIELISPKILLFIG 194 L+++L++ I R ++I+ I PPGNR E ++C +++QIELI+P+I++ +G Sbjct: 62 LNRILEAAGIPRESVYITNIVKCRPPGNRAPLPDEAKVCTDKWLLKQIELIAPQIIVPLG 121 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWH 249 FF + G+W I HP L++ P K TW Sbjct: 122 AVAAEFFLGEK-VSITKVRGQWFEW----HGIRVFPMFHPAYLLRNPSRTPGSPKHLTWL 176 Query: 250 ALITLKKALKNL 261 + +K+AL L Sbjct: 177 DIQEVKRALDAL 188 >gi|167837067|ref|ZP_02463950.1| putative phage-related DNA polymerase [Burkholderia thailandensis MSMB43] Length = 208 Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 6/185 (3%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L++ + C LC +T+ E D M++G P ++++ G+PF G+ G +L Sbjct: 21 WDALRARVADCERCRLCEKRTNTVFGVGDESADWMLVGEAPGENEDKQGEPFVGQAGKLL 80 Query: 137 DKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 D ML+++ + R ++I+ + PPGNRN E+ C P + RQ+ L+ PK+++ +G Sbjct: 81 DNMLRALALKRGENVYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVALVKPKLIVALGR 140 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 DA G+ +P + T HP L++ K W L Sbjct: 141 FAAQTLLKTDASIAS-MRGRVHRYE----GVPVIVTYHPAYLLRSLQDKAKAWSDLCLAN 195 Query: 256 KALKN 260 +N Sbjct: 196 DTYRN 200 >gi|311104684|ref|YP_003977537.1| uracil DNA glycosylase superfamily protein [Achromobacter xylosoxidans A8] gi|310759373|gb|ADP14822.1| uracil DNA glycosylase superfamily protein [Achromobacter xylosoxidans A8] Length = 333 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 3/213 (1%) Query: 48 SAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEG 107 +P+ +P + A + +L E+ + + C LC + + + Sbjct: 121 PPPRPVPKAAEEAAPPPPVPVAEAIRNATLEEMHEQVVACAACGLCKGRRNAVFGHGGQP 180 Query: 108 QDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNL 166 +++G P + ++ G+PF G++G +LD ML S+ + R + I+ + PPGNRN Sbjct: 181 TRWLVVGEAPGEQEDRQGQPFVGRSGQLLDAMLSSVSMSRERDVFITNVIKCRPPGNRNP 240 Query: 167 SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT-PHSI 225 E+ C P +MRQI L+ P+ +L +G DA G+ L T Sbjct: 241 KPEEIAACSPYLMRQIALLKPERILVLGRFAAQTLLGTDATIGS-LRGRIHQLKTDEGVE 299 Query: 226 IPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 IP + + HP L++ P K W L L Sbjct: 300 IPVVVSYHPAYLLRSPSEKARAWQDLRLTVARL 332 >gi|332968166|gb|EGK07248.1| uracil-DNA glycosylase [Desmospora sp. 8437] Length = 241 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 79/186 (42%), Gaps = 5/186 (2%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 L + C L + LM +G P ++ G+PF G+ G + Sbjct: 56 DLESVHQRYARCSRCPLHRGRTRIVLGEGNPASPLMFVGEGPGADEDRQGRPFVGRAGQL 115 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 L +ML++ EI R +I I+ I PPGNR + EM C I+ Q I PK+++ +G+ Sbjct: 116 LSRMLEAAEIPRAEIFITNIVKCRPPGNRTPQDEEMATCITILREQFVAIRPKLIVTLGS 175 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 + A + + G+W + + T HP L++ P K+ W ++ Sbjct: 176 APTRALIDP-AARITRVRGQWVE----RKGVRMMPTFHPAYLLRNPEAKREAWIDFQAIR 230 Query: 256 KALKNL 261 A + + Sbjct: 231 DAYREV 236 >gi|315121906|ref|YP_004062395.1| putative uracil-DNA glycosylase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495308|gb|ADR51907.1| putative uracil-DNA glycosylase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 260 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 179/260 (68%), Positives = 205/260 (78%), Gaps = 2/260 (0%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60 MT KR LSQE+IL ALFYADSGVYWVFD N + ++ + S QPI I + Sbjct: 1 MTYKRTLSQEKILNTALFYADSGVYWVFDHSNGKTHKSWGEEKPPLSS--QPIKEIDQTN 58 Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120 +PLV++A SIAQ A SLHELKSL+ SFHDC L +TS STICATQ G+DLMIIGYTPSDS Sbjct: 59 NPLVEKAYSIAQNARSLHELKSLISSFHDCALQNTSSSTICATQEGGKDLMIIGYTPSDS 118 Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180 DNI+G PFSGKTG++LDKMLQSI +MR Q H SMISPWHPPGNR LS IEMEICRP+IM+ Sbjct: 119 DNINGNPFSGKTGDILDKMLQSIGVMRIQTHTSMISPWHPPGNRQLSKIEMEICRPLIMK 178 Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 QIEL+SP+IL F+GNKT NFFFNND + YQNLGKW + + IPTL+TVHPQEL+QY Sbjct: 179 QIELVSPRILFFLGNKTINFFFNNDDKANYQNLGKWHKIQVQNRTIPTLSTVHPQELMQY 238 Query: 241 PLIKKNTWHALITLKKALKN 260 PLIKK WH LITLKKALKN Sbjct: 239 PLIKKTAWHTLITLKKALKN 258 >gi|303257069|ref|ZP_07343083.1| arginine biosynthesis bifunctional protein ArgJ [Burkholderiales bacterium 1_1_47] gi|302860560|gb|EFL83637.1| arginine biosynthesis bifunctional protein ArgJ [Burkholderiales bacterium 1_1_47] Length = 321 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 2/227 (0%) Query: 33 NEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHL 92 N S R E + A + + R + +A LK L++ C + Sbjct: 95 NAPPPRSARPEPAAKPAYRSASEARGVRPEAYTEARIHQIATADWQTLKQLVQDCRACEI 154 Query: 93 CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-H 151 S+ L + LM+IG P ++ G+PF G +G +LDK+L++ ++ R + Sbjct: 155 SSSRLHPVFGQGYPPCRLMLIGEAPGAEEDRLGQPFVGPSGKLLDKILEAAKLDREKDLC 214 Query: 152 ISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQ 211 I PP N E CRP + RQIELI P++++ +G ++FF D + Sbjct: 215 IFNTLKCRPPLNATPEKAETMACRPFLERQIELIDPEVIVAMGKPAASWFF-PDLKTLNP 273 Query: 212 NLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 GK NL + T HP L++ P K+ W + L Sbjct: 274 YRGKVHNLTVQGKPRKVIVTYHPSYLLRSPQEKRKAWLDWCLILDTL 320 >gi|296135025|ref|YP_003642267.1| phage SPO1 DNA polymerase-related protein [Thiomonas intermedia K12] gi|295795147|gb|ADG29937.1| phage SPO1 DNA polymerase-related protein [Thiomonas intermedia K12] Length = 288 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 61/237 (25%), Positives = 97/237 (40%), Gaps = 18/237 (7%) Query: 28 FDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKAC-------SLHEL 80 +P EA E + QP R I P + IA A L Sbjct: 35 QAQPVPEAAPEVIATPATAKPVAQPPKPNRPIPPPRPTSSIPIADAARVEAIVRMDWDGL 94 Query: 81 KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML 140 ++ ++ C L S+ + + + MIIG P ++ G+PF G G +LD ML Sbjct: 95 QAGAQACRACKLGSSRHQAVFGSGSTQARWMIIGEAPGAEEDRQGQPFVGAAGQLLDAML 154 Query: 141 QSIEIMRTQI------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 Q+I + R+ +I+ + PPGNRN E+ C P + RQ+ L+ P+++L +G Sbjct: 155 QAIGLDRSADDPERAVYIANVLKCRPPGNRNPEPEEVGQCAPWLERQVALLQPQLILALG 214 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 + + A Q G+ IP + + HP L++ P K W L Sbjct: 215 RFAAHSLLGSQA-PISQLRGQVHEFA----GIPVIVSYHPAYLLRNPADKARVWRDL 266 >gi|197104821|ref|YP_002130198.1| uracil-DNA glycosylase [Phenylobacterium zucineum HLK1] gi|196478241|gb|ACG77769.1| uracil-DNA glycosylase [Phenylobacterium zucineum HLK1] Length = 274 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 69/270 (25%), Positives = 110/270 (40%), Gaps = 13/270 (4%) Query: 1 MTSKRILSQEQILTIALFYADSGVYW-VFDEPNNEATYESQRKEKSIDSAIQPITNIRHI 59 M ++ F+A++GV + DEP + K + P + Sbjct: 1 MPPAAPSDALIAESLLAFWAEAGVDGMLLDEPFDRIEAGKILPPKPAPPLVAPAVRPGPV 60 Query: 60 HSPLVQQADSIAQKAC------SLHELKSLLRSFHDCHLC--STSLSTICATQTEGQDLM 111 SP + +IAQ + L + + +F C L + +C LM Sbjct: 61 ASPQPDVSAAIAQAQALAAQAQDMDALAAAIAAFEGCPLRFEGAASKAVCWRGEPSAPLM 120 Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEM 171 +IG P ++ G PF G+ G +LD+ML + + + I+ W PPGNR S E Sbjct: 121 VIGEGPGAEEDSQGLPFVGRAGKLLDRMLGAAGLT-GRALITNTVFWRPPGNRTPSPHEQ 179 Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS--IIPTL 229 IC P + R I L P++LL +G + D G+W + +P + Sbjct: 180 LICAPFLERAIALTQPRMLLLVGGASAKSLLKKDEGILS-LRGRWFEWRSSDGALELPAM 238 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALK 259 T+HP L++ P KK W L+TL + L Sbjct: 239 PTLHPAFLLRQPGAKKRAWSDLLTLAERLD 268 >gi|113868094|ref|YP_726583.1| bacteriophage-type DNA polymerase [Ralstonia eutropha H16] gi|113526870|emb|CAJ93215.1| Putative DNA polymerase bacteriophage-type,uracil-DNA glycosylase superfamily [Ralstonia eutropha H16] Length = 289 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 46/198 (23%), Positives = 82/198 (41%), Gaps = 6/198 (3%) Query: 60 HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSD 119 Q A + L + + C LC +T+ + M++G P + Sbjct: 88 EPGSAQADREAAIASMEWPALDAAVAGCTACGLCQHRTNTVFGVGDRQAEWMLVGEAPGE 147 Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPII 178 ++++ G+PF G+ G +LD ML ++ + R + I+ + PPGNRN E+ C P + Sbjct: 148 NEDLQGEPFVGQAGKLLDNMLGALGLARGRNVFIANVLKCRPPGNRNPEPEEVAQCEPFL 207 Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238 RQI L+ P +++ +G + G + IP + T HP L+ Sbjct: 208 RRQIALVKPSVIVVLGRFAAQSLL-RSTTPIGKLRGTVHSYE----GIPVVVTYHPAYLL 262 Query: 239 QYPLIKKNTWHALITLKK 256 + K W L ++ Sbjct: 263 RTLTDKARAWEDLCLARE 280 >gi|288574896|ref|ZP_06393253.1| phage SPO1 DNA polymerase-related protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570637|gb|EFC92194.1| phage SPO1 DNA polymerase-related protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 206 Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 49/190 (25%), Positives = 88/190 (46%), Gaps = 10/190 (5%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L L + S C LC + LM +G P + ++ SG PF G+ G +L Sbjct: 15 LARLSHEVSSCRRCDLCKERTQPVLGEGPPDAALMFVGEGPGEDEDRSGIPFVGRAGRLL 74 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 DK+L++ +I R ++I+ + PP NR E +C+ + QI +I+P+I++ +GN Sbjct: 75 DKILEAAKIDRKGVYITNVVKCRPPKNRTPMVEETMVCQRFLEAQIAVINPRIIVCLGNT 134 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK-----NTWHAL 251 +F ++ + G+W + I + HP L++ KK TW + Sbjct: 135 PMKWFLG-TSEGITKLRGQWFSW----KGIDVMPMFHPSYLLRNESRKKNSPKALTWRDI 189 Query: 252 ITLKKALKNL 261 + +++ L L Sbjct: 190 LEVRRRLDEL 199 >gi|332531590|ref|ZP_08407487.1| putative DNA polymerase-like protein [Hylemonella gracilis ATCC 19624] gi|332038953|gb|EGI75382.1| putative DNA polymerase-like protein [Hylemonella gracilis ATCC 19624] Length = 283 Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 101/270 (37%), Gaps = 32/270 (11%) Query: 19 YADSGVYWVFDEPNNEATYESQRKEKSIDSAIQ---------------------PITNIR 57 + GV P + + + + P+ Sbjct: 11 LEEMGVRVW--APRDAVSAPETAPAPPFQNLPEGSREGQAAPRPAAPRVPPTQVPVPVAM 68 Query: 58 HIHSPLVQQADSIAQ--KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115 V + + A +L++ + C LC + +T+ +I+G Sbjct: 69 VSDRAAVAPSRDLPADIAAMGWDDLEAAVAGCQACGLCKSRKNTVFGVGQRQARWLIVGE 128 Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR------TQIHISMISPWHPPGNRNLSNI 169 P +++++ G+PF G+ G +LD ML+++ R ++I+ + PPGNRN + Sbjct: 129 APGENEDLQGEPFVGQAGKLLDNMLKTLGRSRTSDDEAQSVYIANVLKCRPPGNRNPAPE 188 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPT 228 E+ C P + RQ+ L+ P+I+L +G + LG+ + +P Sbjct: 189 EVLQCEPYLRRQVALLQPRIILALGRFAVQSLLQHSVPDVATLPLGRLRGQVYRYEGVPV 248 Query: 229 LATVHPQELIQYPLIKKNTWHALITLKKAL 258 + + HP L++ P K W L + + Sbjct: 249 VVSYHPAYLLRTPQDKAKAWDDLCLAQSLM 278 >gi|170696493|ref|ZP_02887618.1| phage SPO1 DNA polymerase-related protein [Burkholderia graminis C4D1M] gi|170138596|gb|EDT06799.1| phage SPO1 DNA polymerase-related protein [Burkholderia graminis C4D1M] Length = 390 Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 55/246 (22%), Positives = 90/246 (36%), Gaps = 19/246 (7%) Query: 26 WVFDEPNNEATYESQRKEKSIDSAIQP----------ITNIRHIHSPLVQQADSIAQKAC 75 DEP A + R + P + A Sbjct: 142 AASDEP---AVAQPPRPSEPSSFDAPPDDGFAWFDDLPLHPPGEGDADAAMPALPAIDTL 198 Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 L + + C LC T+ D M+IG P ++++ G+PF G+ G + Sbjct: 199 DWDALSERVSTCERCRLCEKRTKTVFGVGDRNADWMLIGEAPGENEDRVGEPFVGQAGKL 258 Query: 136 LDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 LD ML+S+ + R +I+ + PPGNRN E+ C P + RQ+ L+ PK+++ +G Sbjct: 259 LDNMLRSLTLARDSNVYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVALVKPKLIVALG 318 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 DA G+ +P + T HP L++ K W L Sbjct: 319 RFAAQSLLKTDA-SISSLRGRVHEYE----GVPVIVTYHPAYLLRSLPDKAKAWADLCLA 373 Query: 255 KKALKN 260 + + Sbjct: 374 RDTWRE 379 >gi|167590014|ref|ZP_02382402.1| phage SPO1 DNA polymerase-related protein [Burkholderia ubonensis Bu] Length = 307 Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 54/253 (21%), Positives = 97/253 (38%), Gaps = 22/253 (8%) Query: 21 DSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSP----------------LV 64 D+G + + A ++ + + P + R + Sbjct: 29 DAGTPPLEAHAPSAAGERIASRQAARTDDVAPPADARPVEDDDFAWFDAAPPADPAPVAE 88 Query: 65 QQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNIS 124 +A L + + C LC +T+ D M++G P ++++ Sbjct: 89 LRAAETPVAELDWDALAARVADCTRCRLCEKRTNTVFGVGDREADWMLVGEAPGENEDKQ 148 Query: 125 GKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE 183 G+PF G+ G +LD MLQS+ + R ++I+ + PPGNRN E+ C P + RQ+ Sbjct: 149 GEPFVGQAGKLLDNMLQSLSLERGANVYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVA 208 Query: 184 LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI 243 L+ PK+++ +G DA G+ +P + T HP L++ Sbjct: 209 LVKPKLIVALGRFAAQTLLKTDASIAS-LRGRVHAYE----GVPVIVTYHPAYLLRSLQD 263 Query: 244 KKNTWHALITLKK 256 K W L + Sbjct: 264 KSKAWADLCLARD 276 >gi|218295021|ref|ZP_03495857.1| phage SPO1 DNA polymerase-related protein [Thermus aquaticus Y51MC23] gi|218244224|gb|EED10749.1| phage SPO1 DNA polymerase-related protein [Thermus aquaticus Y51MC23] Length = 204 Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 11/192 (5%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 +L L++ ++ C L + +LMI+G P + ++ +G PF GK G + Sbjct: 2 TLEVLEAQAKACTACRLAEGRTQVVFGEGNPDANLMIVGEGPGEEEDKTGHPFVGKAGQL 61 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC-RPIIMRQIELISPKILLFIG 194 L+++L++ I R +I+I+ I PPGNR E +IC +++QIELI+P+I++ +G Sbjct: 62 LNRILEAAGIRREEIYITNIVKCRPPGNRAPLPDEAKICTDRWLLKQIELIAPQIIVPLG 121 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWH 249 FF + G+W I HP L++ P K TW Sbjct: 122 AVAAEFFLGEK-VSITKVRGQWYEW----HGIKVFPMFHPAYLLRNPSRAPGSPKHLTWL 176 Query: 250 ALITLKKALKNL 261 + +K+AL+ L Sbjct: 177 DIQEVKRALQAL 188 >gi|117926680|ref|YP_867297.1| phage SPO1 DNA polymerase-related protein [Magnetococcus sp. MC-1] gi|117610436|gb|ABK45891.1| phage SPO1 DNA polymerase-related protein [Magnetococcus sp. MC-1] Length = 300 Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 6/226 (2%) Query: 35 ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94 A ++R A + I +P Q + A KA +L + ++ C LC Sbjct: 73 AAAPAKRPRLPQPVAPAHKPDETPIVTPP-QPLNLPAGKAAALEHIAQHCQACQRCDLCR 131 Query: 95 TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154 T + ++ +G P ++ G+PF G G +LD+M+ +I + R ++I+ Sbjct: 132 TRTQAVPGIGHPDAPVVFVGEAPGAEEDRIGQPFVGPAGQLLDRMMATIGLQREHVYIAN 191 Query: 155 ISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLG 214 + PPGNRN E+ +C+ + +Q+E+ISPK++ +G + Sbjct: 192 VVKCRPPGNRNPQTHEVALCQGYLHQQLEVISPKVIFALGRFAIQSLLGSTDSVAAIRR- 250 Query: 215 KWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 IP LA+ HP ++ P KK+ W LI L++ L+N Sbjct: 251 ----HEHSWRGIPVLASYHPAFYLRTPTRKKDGWLDLIRLQQLLEN 292 >gi|224372523|ref|YP_002606895.1| uracil-DNA glycosylase [Nautilia profundicola AmH] gi|223588852|gb|ACM92588.1| uracil-DNA glycosylase [Nautilia profundicola AmH] Length = 210 Score = 181 bits (460), Expect = 6e-44, Method: Composition-based stats. Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 6/186 (3%) Query: 74 ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 L EL+ + + C L T + DLM IG P ++ +G+PF G+ G Sbjct: 30 PKELDELEKICLNCTLCDLSKTRTHVVFGEGNPNADLMFIGEGPGAEEDKTGRPFVGRAG 89 Query: 134 NML-DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192 +L +L +E+ R ++I+ I PP NR + E E C+P +++QI++I+PKIL+ Sbjct: 90 KLLTKIILNVLELTREDVYIANIVKCRPPNNRVPTIEEAETCKPYLLKQIDIINPKILVC 149 Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 +G + N + G+ + T HP L++ P KK + + Sbjct: 150 LGKTAF-MYLMNTDMPISKVRGQIFEFKEK----KVIPTFHPSFLLRNPSAKKEAYKDFL 204 Query: 253 TLKKAL 258 +K L Sbjct: 205 LIKSML 210 >gi|226227093|ref|YP_002761199.1| putative DNA glycosylase [Gemmatimonas aurantiaca T-27] gi|226090284|dbj|BAH38729.1| putative DNA glycosylase [Gemmatimonas aurantiaca T-27] Length = 293 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 50/235 (21%), Positives = 96/235 (40%), Gaps = 10/235 (4%) Query: 30 EPNNEATYESQRKEKSIDSAIQ-----PITNIRHIHSPLVQQADSIAQKACSLHELKSLL 84 P + R +S+ I +P + +L +L + Sbjct: 47 APVKRTAPAAGRVAESVAQLPAWLEALGIPAGLEAGAPQPTSVAPDIAQLPTLEQLAQHV 106 Query: 85 RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIE 144 C L +++ + + D + +G P +++ G+PF G G +L K+L +I+ Sbjct: 107 AGCQRCALHASAKNPVPGEGNPEADFLCVGEAPGANEDAQGRPFVGDAGQLLTKILGAIQ 166 Query: 145 IMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204 + R ++I + PPGNR+ E++ C+P ++RQIEL+ PK++L +G Sbjct: 167 LSRESVYICNVLKHRPPGNRDPLPDEVQACQPYLLRQIELVRPKVILALGRFAAQTLLQ- 225 Query: 205 DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 G+ +P + T HP L++ K+ TW + ++ L Sbjct: 226 TTTSIGVLRGRIH----RFHGVPLIVTYHPAALLRNESWKRPTWEDVKLARRVLD 276 >gi|46198674|ref|YP_004341.1| uracil-DNA glycosylase [Thermus thermophilus HB27] gi|21464612|emb|CAD29336.1| uracil-DNA glycosylase [Thermus thermophilus HB27] gi|46196297|gb|AAS80714.1| uracil-DNA glycosylase [Thermus thermophilus HB27] Length = 205 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 11/192 (5%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 +L L++ ++ C L + LMI+G P + ++ +G+PF GK G + Sbjct: 2 TLELLQAQAQNCTACRLAEGRTRVVFGEGNPDAKLMIVGEGPGEEEDKTGRPFVGKAGQL 61 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC-RPIIMRQIELISPKILLFIG 194 L+++L++ I R +++I+ I PP NR E +IC +++QIELI+P+I++ +G Sbjct: 62 LNRILEAAGIPREEVYITNIVKCRPPQNRAPLPDEAKICTDKWLLKQIELIAPQIIVPLG 121 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWH 249 FF + GKW I HP L++ P K TW Sbjct: 122 AVAAEFFLGEK-VSITKVRGKWYEW----HGIKVFPMFHPAYLLRNPSRAPGSPKHLTWL 176 Query: 250 ALITLKKALKNL 261 + +K+AL L Sbjct: 177 DIQEVKRALDAL 188 >gi|147679076|ref|YP_001213291.1| uracil-DNA glycosylase [Pelotomaculum thermopropionicum SI] gi|146275173|dbj|BAF60922.1| uracil-DNA glycosylase [Pelotomaculum thermopropionicum SI] Length = 202 Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats. Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 5/188 (2%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 SL ELK++ + C L S + LM+IG P ++ G+PF GK G Sbjct: 16 NSLEELKAMAVACTRCGLRSGCSGVVFGEGNPEARLMLIGEGPGADEDRMGRPFVGKAGQ 75 Query: 135 MLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 +LDK+L++ + R +I+ + PPGNR E C P + RQIEL+SP I++ + Sbjct: 76 LLDKILEAAGLERFTHTYIANVVKCRPPGNRVPRPDEAARCLPWLYRQIELVSPGIIVLL 135 Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253 G+ + A + + G+W S I + T HP L++ K+ W Sbjct: 136 GSTALQNLIDP-AARITEMRGRWL---VSKSGIKIMPTYHPAALLRDVSKKRPVWEDFQK 191 Query: 254 LKKALKNL 261 ++ + + Sbjct: 192 VRDEYRKI 199 >gi|255262434|ref|ZP_05341776.1| uracil-DNA glycosylase [Thalassiobium sp. R2A62] gi|255104769|gb|EET47443.1| uracil-DNA glycosylase [Thalassiobium sp. R2A62] Length = 270 Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats. Identities = 59/265 (22%), Positives = 103/265 (38%), Gaps = 25/265 (9%) Query: 14 TIALFYADSGVYWV-FDEPNNEATYESQRKEKSIDSA-----------IQPITNIRHIHS 61 + + + GV D P N + + + + + Sbjct: 12 AMLGWQVELGVDEATLDAPVNRYEIPAAAPKVETQPVELPKAKATPPPAAAAPDPVALAN 71 Query: 62 PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121 V A AQ A S+ L + +F C L + ST+ +MIIG P+ + Sbjct: 72 EAVNAARLAAQNATSIETLTETVNAFEHCELKRGARSTLLGVGAASAPVMIIGEPPNRDE 131 Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQI------HISMISPWHPPGNRNLSNIEMEICR 175 + G+ F G G +LD+ML +I R ++ + PW PP + E+ + Sbjct: 132 DREGRAFVGAAGQLLDRMLAAIGRDRNATDPETGVFVASVMPWRPPNRD-PNATELAMTM 190 Query: 176 PIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 P + R +EL+ PKI++ +GN + + + G+W P L +P+ Sbjct: 191 PFLERLVELVDPKIVILMGNVSCQAALGRNG--ITRLRGQWLT----GFNRPVLPMFNPE 244 Query: 236 ELIQYPLIKKNTWHALITLKKALKN 260 L++ P K+ WH L+ +K L Sbjct: 245 FLLRTPAAKREAWHDLLMVKAKLNE 269 >gi|291296318|ref|YP_003507716.1| phage SPO1 DNA polymerase-related protein [Meiothermus ruber DSM 1279] gi|290471277|gb|ADD28696.1| phage SPO1 DNA polymerase-related protein [Meiothermus ruber DSM 1279] Length = 205 Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats. Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 11/192 (5%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 +L L + ++ C L + LMI+G P + +++ G+PF G++G + Sbjct: 2 NLELLAAQAKACTACGLARQRTHVVFGEGNPDAKLMIVGEGPGEDEDLQGRPFVGRSGQL 61 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP-IIMRQIELISPKILLFIG 194 LDK+L++ I R ++I+ I PPGNR +E + C +++QI+L+ P+I++ +G Sbjct: 62 LDKILEAAGIPRASVYIANIVKCRPPGNRAPEPLEAKTCTSLWLVKQIQLVKPQIIIPLG 121 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWH 249 FF + GK+ I HP L++ P K TW Sbjct: 122 ATALEFFAGEKL-SITKARGKFFEWQ----GIRIFPMFHPAYLLRNPSREAGSPKHLTWQ 176 Query: 250 ALITLKKALKNL 261 + +KK L L Sbjct: 177 DIQLVKKTLDEL 188 >gi|186476121|ref|YP_001857591.1| phage SPO1 DNA polymerase-like protein [Burkholderia phymatum STM815] gi|184192580|gb|ACC70545.1| phage SPO1 DNA polymerase-related protein [Burkholderia phymatum STM815] Length = 341 Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats. Identities = 48/205 (23%), Positives = 86/205 (41%), Gaps = 6/205 (2%) Query: 53 ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMI 112 + L++ + + C LC +T+ D M+ Sbjct: 129 PAGPPSDLEANTSEPVQPGIDTLDWAALEARVSACERCRLCERRTNTVFGVGDREADWML 188 Query: 113 IGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEM 171 IG P ++++ G+PF G+ G +LD ML+S+ + R T ++I+ + PPGNRN E+ Sbjct: 189 IGEAPGENEDKQGEPFVGQAGKLLDNMLRSLGLARGTNVYIANVIKCRPPGNRNPERDEV 248 Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231 C P + RQ+ L+ PK+++ +G +A G+ +P + T Sbjct: 249 ARCEPYLQRQVALVKPKLIIALGRFAAQSLLKTEA-SISSLRGRVYEYE----GVPVVVT 303 Query: 232 VHPQELIQYPLIKKNTWHALITLKK 256 HP L++ K +W L + Sbjct: 304 YHPAYLLRSLGDKAKSWQDLCLARD 328 >gi|152992742|ref|YP_001358463.1| uracil-DNA glycosylase [Sulfurovum sp. NBC37-1] gi|151424603|dbj|BAF72106.1| uracil-DNA glycosylase [Sulfurovum sp. NBC37-1] Length = 222 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 52/188 (27%), Positives = 94/188 (50%), Gaps = 6/188 (3%) Query: 74 ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 +L L+ + H C L + + D++IIG P +++ +GKPF G++G Sbjct: 39 PDTLDSLQKQAINCHLCDLSKSRQKVVFGEGNPHADILIIGEGPGATEDSTGKPFVGRSG 98 Query: 134 NMLDKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192 +L KML+++ + R ++I+ I PP NR + E C+P +++QIELI PK++L Sbjct: 99 ELLSKMLENVLGLKRADVYITNIVKCRPPNNRAPTPTEAHTCQPYLLKQIELIKPKLILT 158 Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 +G ++ +D + G H + T HP L++ P KK + L+ Sbjct: 159 LGATAYHYLTGDDT-GITKVRGSIH----KHGNATLIPTYHPSYLLRNPSAKKEVFEDLL 213 Query: 253 TLKKALKN 260 +K+ +K+ Sbjct: 214 KVKELMKS 221 >gi|295676848|ref|YP_003605372.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp. CCGE1002] gi|295436691|gb|ADG15861.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp. CCGE1002] Length = 332 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 56/242 (23%), Positives = 90/242 (37%), Gaps = 18/242 (7%) Query: 28 FDEPNNEATYESQRKEKSIDSAIQ------------PITNIRHIHSPLVQQADSIAQKAC 75 FDE + + S A P + A Sbjct: 82 FDETAARRETSQPQPDFSAPPAFDAPLDDDFAWFDDPTASTPAPAEARRAAPALPAVHTL 141 Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 L + C LC +T+ D M+IG P ++++ G+PF G+ G + Sbjct: 142 DWDALAERVAGCEACRLCEKRTNTVFGVGDREADWMLIGEAPGENEDRQGEPFVGQAGKL 201 Query: 136 LDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 LD ML S+ + R T ++I+ + PPGNRN E+ C P + RQ+ L+ PK+++ +G Sbjct: 202 LDNMLHSLALARGTNVYIANVIKCRPPGNRNPQPDEVARCEPYLQRQVSLVKPKLIVALG 261 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 DA G+ +P + T HP L++ K W L Sbjct: 262 RFAAQSLLKTDA-SISSLRGRVHTYE----GVPVIVTYHPAYLLRSLPDKAKAWTDLCLA 316 Query: 255 KK 256 + Sbjct: 317 RA 318 >gi|294339041|emb|CAZ87390.1| putative Uracil-DNA glycosylase [Thiomonas sp. 3As] Length = 286 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 12/229 (5%) Query: 35 ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKAC-SLHELKSLLRSFHDCHLC 93 AT + + +PI R S + A I A EL++ ++ C L Sbjct: 47 ATPAAAKPVAQPPKPNRPIPPPRPASSIPITDAARIEAIARMDWDELQAGAQACRACKLG 106 Query: 94 STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI--- 150 S+ + + + MIIG P ++ G+PF G G +LD MLQ+I + R+ Sbjct: 107 SSRHQAVFGSGSTQARWMIIGEAPGAEEDRQGQPFVGAAGQLLDAMLQAIGLDRSADDPE 166 Query: 151 ---HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207 +I+ + PPGNRN E+ C P + RQ+ L+ P+++L +G + + A Sbjct: 167 RAVYIANVLKCRPPGNRNPEPEEVAQCAPWLERQVALLQPQLILALGRFAAHSLLGSQA- 225 Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 Q G+ +P + + HP L++ P K W L + Sbjct: 226 PISQLRGQVHEFA----GVPVIVSYHPAYLLRNPADKARVWRDLCFARD 270 >gi|323526514|ref|YP_004228667.1| phage SPO1 DNA polymerase-like protein [Burkholderia sp. CCGE1001] gi|323383516|gb|ADX55607.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp. CCGE1001] Length = 344 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 95/238 (39%), Gaps = 16/238 (6%) Query: 34 EATYESQRKEKSIDSAIQPITNI-------RHIHSPLVQQADSIAQKA---CSLHELKSL 83 A + ++ S S+ + +H P A A A L Sbjct: 94 RAPHVAEPPATSEPSSFGAPPDDGFAWFDDLPLHPPGEAHAAVPALPAIHTLDWDALSER 153 Query: 84 LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143 + + C LC + D M+IG P ++++ G+PF G+ G +LD ML+S+ Sbjct: 154 VANCERCRLCEKRTQAVFGVGDRNADWMLIGEAPGENEDRVGEPFVGQAGKLLDNMLRSL 213 Query: 144 EIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202 + R ++I+ + PPGNRN E+ C P + RQ+EL+ PK+++ +G Sbjct: 214 TLARGANVYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVELVKPKLIVALGRFAAQSLL 273 Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 DA G+ +P + T HP L++ K W L + + Sbjct: 274 KTDA-SISSLRGRVHQYE----GVPVIVTYHPAYLLRSLPDKAKAWADLCLARDTWRE 326 >gi|325972111|ref|YP_004248302.1| phage SPO1 DNA polymerase-related protein [Spirochaeta sp. Buddy] gi|324027349|gb|ADY14108.1| phage SPO1 DNA polymerase-related protein [Spirochaeta sp. Buddy] Length = 249 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 6/185 (3%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 ++ +L++L+ C LC T + + LM+IG P ++ SGKPF GK G Sbjct: 63 NVRQLEALVALCTKCRLCETRKQVVFGEGSIPARLMVIGEGPGFEEDASGKPFVGKAGKY 122 Query: 136 LDKMLQSIEIMRTQ-IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 LD L +I + R+ ++I+ I PP NR+ E++ C P + RQI+L+ P+I+L +G Sbjct: 123 LDSWLGAIHMDRSNAVYIANIVKCRPPENRDPEVDEVQACLPYLKRQIQLVKPQIILLVG 182 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 + GK + +P + T HP +++ +K+ W L + Sbjct: 183 SVAARSLLGVSDGV-----GKLRGRFLRYEDVPVVVTYHPAAVLRNMELKRPVWDDLKKI 237 Query: 255 KKALK 259 L Sbjct: 238 AAYLD 242 >gi|239616610|ref|YP_002939932.1| phage SPO1 DNA polymerase-related protein [Kosmotoga olearia TBF 19.5.1] gi|239505441|gb|ACR78928.1| phage SPO1 DNA polymerase-related protein [Kosmotoga olearia TBF 19.5.1] Length = 207 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 8/185 (4%) Query: 82 SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 + + C L T + + + ++ +G P ++ +G+PF G+ G +L K+L+ Sbjct: 16 RKIEECNLCPLHLTRTNVVPGEGSLDSPVVFVGEGPGADEDATGRPFVGRAGKLLTKILE 75 Query: 142 SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 S+ + R ++I+ I PP NR + EM+ C P ++ Q+ +I PK+++ +G F Sbjct: 76 SVGLSREDVYITNIVKCRPPNNRTPTLQEMKACEPYLLSQLAVIKPKLIVCLGATALAAF 135 Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWHALITLKK 256 ++ + + GK + H I HP L++ P K+ TW + ++K Sbjct: 136 LESEKVQITKYRGKLFDW---HGGIKVFGMFHPSYLLRNPSTAPGSPKRLTWEDIQKVRK 192 Query: 257 ALKNL 261 + Sbjct: 193 MYDQV 197 >gi|119898004|ref|YP_933217.1| DNA-directed DNA polymerase [Azoarcus sp. BH72] gi|119670417|emb|CAL94330.1| DNA-directed DNA polymerase [Azoarcus sp. BH72] Length = 283 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 6/185 (3%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 EL++ +R+ C LC + +M +G P ++ G+PF G+ G +L Sbjct: 101 WDELEADIRACTACALCQRRKQAVPGVGDREARVMFVGEGPGAEEDQRGEPFVGQAGKLL 160 Query: 137 DKMLQSIEIMRTQ-IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 D ML +I + R + ++I+ PP NR E+ C P + RQI L+ P++L+ +G Sbjct: 161 DNMLAAIGLRRGEGVYIANSVKCRPPLNRTPEAGEIATCLPYLERQIALVQPRLLVALGR 220 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 + + + G+ + IP L T HP L++ P K W L ++ Sbjct: 221 PAAQSLLDTE-IAITKARGRAFE----RAGIPVLVTYHPAYLLRNPQDKAKAWEDLCLVR 275 Query: 256 KALKN 260 + L Sbjct: 276 RTLAQ 280 >gi|297566593|ref|YP_003685565.1| phage SPO1 DNA polymerase-like protein [Meiothermus silvanus DSM 9946] gi|296851042|gb|ADH64057.1| phage SPO1 DNA polymerase-related protein [Meiothermus silvanus DSM 9946] Length = 205 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 11/192 (5%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 +L L + + C L T + + I+G P + ++ +G+PF GK G + Sbjct: 2 NLELLAAQAQVCTACRLAKTRTKVVFGEGNPDAKVFIVGEGPGEEEDKTGRPFVGKAGQL 61 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP-IIMRQIELISPKILLFIG 194 LD++L++ I R I+IS I PP NR E++ C + +Q+ELI P+I++ +G Sbjct: 62 LDRILEAAGIPRESIYISNIVKCRPPQNRVPLPDEVKACTSLWLNKQLELIRPQIIVPLG 121 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWH 249 FF + G+W + I HP L++ P K TW Sbjct: 122 ATAAEFFLGEK-VSITKIRGQWMDW----HGILLFPMFHPAYLLRNPSRAAGSPKHLTWL 176 Query: 250 ALITLKKALKNL 261 + LK+ + +L Sbjct: 177 DIQALKQKMDSL 188 >gi|196228387|ref|ZP_03127254.1| phage SPO1 DNA polymerase-related protein [Chthoniobacter flavus Ellin428] gi|196227790|gb|EDY22293.1| phage SPO1 DNA polymerase-related protein [Chthoniobacter flavus Ellin428] Length = 302 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 47/231 (20%), Positives = 97/231 (41%), Gaps = 14/231 (6%) Query: 40 QRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCH-LCSTSLS 98 + + + +A + H + A KA L ++ + + C L + Sbjct: 65 KPASEPVKAAARVSETAPVSHYDGPRMAPLEGSKAERLAAMRGPVLACTKCPHLVKSRTQ 124 Query: 99 TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158 + +LM +G P + ++ G+PF GK G +L K+++++ R ++I+ + Sbjct: 125 VVFGVGNPEAELMFVGEAPGEDEDRQGEPFVGKAGQLLTKIIETMGFARGDVYIANVLKC 184 Query: 159 H------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN 212 PGNR EM+ C P + QI++I P++L+ +G + + Sbjct: 185 RPDMPPGMPGNRKPKVEEMQTCLPYLREQIDIIRPRLLVALGATAMEGLTGST-DSMSRL 243 Query: 213 LGKWSNLCTPHSIIPTLATVHPQELIQYPLI--KKNTWHALITLKKALKNL 261 G+W + P +AT HP L++ + K+ W ++ + + L + Sbjct: 244 RGRWHDF----HGTPLMATYHPAYLLRNQSLSEKRKVWEDMLMVLERLGKM 290 >gi|55980687|ref|YP_143984.1| uracil-DNA glycosylase [Thermus thermophilus HB8] gi|38493048|pdb|1UI0|A Chain A, Crystal Structure Of Uracil-Dna Glycosylase From Thermus Thermophilus Hb8 gi|32698481|dbj|BAC79245.1| uracil-DNA glycosylase [Thermus thermophilus] gi|55772100|dbj|BAD70541.1| uracil-DNA glycosylase [Thermus thermophilus HB8] Length = 205 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 11/192 (5%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 +L L++ ++ C L + LMI+G P + ++ +G+PF GK G + Sbjct: 2 TLELLQAQAQNCTACRLMEGRTRVVFGEGNPDAKLMIVGEGPGEEEDKTGRPFVGKAGQL 61 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC-RPIIMRQIELISPKILLFIG 194 L+++L++ I R +++I+ I PP NR E +IC +++QIELI+P+I++ +G Sbjct: 62 LNRILEAAGIPREEVYITNIVKCRPPQNRAPLPDEAKICTDKWLLKQIELIAPQIIVPLG 121 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWH 249 FF + GKW I HP L++ P K TW Sbjct: 122 AVAAEFFLGEK-VSITKVRGKWYEW----HGIKVFPMFHPAYLLRNPSRAPGSPKHLTWL 176 Query: 250 ALITLKKALKNL 261 + +K+AL L Sbjct: 177 DIQEVKRALDAL 188 >gi|189426388|ref|YP_001953565.1| phage SPO1 DNA polymerase-related protein [Geobacter lovleyi SZ] gi|189422647|gb|ACD97045.1| phage SPO1 DNA polymerase-related protein [Geobacter lovleyi SZ] Length = 249 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 102/254 (40%), Gaps = 27/254 (10%) Query: 9 QEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQAD 68 + +SGV + E + ++ +E QP+ + Sbjct: 10 YASVREYLQELEESGVDGLPFEELQQTV--NRGREPEQQRQEQPLPAVLQG--------- 58 Query: 69 SIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128 L L+ + C L + + + E L+ +G P ++ G+PF Sbjct: 59 --------LEGLRRKIGDCQRCDLAQSRTNLVFGAGPEKARLVFVGEAPGADEDRQGQPF 110 Query: 129 SGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188 G+ G +L ++++++ + RTQ++I + PP NRN E+ C P + +Q+++I P+ Sbjct: 111 VGEAGQVLTRLIEAMGLKRTQVYICNVLKCRPPANRNPHKDEIATCSPFLQQQLQIIKPE 170 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK--- 245 +++ +G + + G++ + IP + T HP L+ K+ Sbjct: 171 VIVALGTFAAQTLL-ETKEPISRMRGQFHSW----HGIPVMPTFHPSFLLHNKENKQHYW 225 Query: 246 NTWHALITLKKALK 259 + W + + + LK Sbjct: 226 DVWSDMEQVLRKLK 239 >gi|240141067|ref|YP_002965547.1| putative phage DNA polymerase [Methylobacterium extorquens AM1] gi|240011044|gb|ACS42270.1| putative phage DNA polymerase [Methylobacterium extorquens AM1] Length = 337 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 80/329 (24%), Positives = 129/329 (39%), Gaps = 71/329 (21%) Query: 1 MTSKRILSQE--QILTIALFYADSGVYWVFDE-PNNEATYE------------------- 38 MT+ + +++ F+ +GV V DE P++ Sbjct: 4 MTANHADTDARGDLISYLDFHVAAGVDAVLDEQPHDRFAEAESVRAEAALQAEPATRREP 63 Query: 39 -------------------------SQRKEKSIDSAIQPI----TNIRHIHSPLVQQADS 69 S+ ++ SA +P + +P + + Sbjct: 64 LESRREPLEPRREPLPPRREALEPRSESPQRDAPSAEEPPLAFRRELPSRDAPAREPPRT 123 Query: 70 IAQKA------------------CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLM 111 A +L EL+ LLR F C L T+ + + A +M Sbjct: 124 YGNAAGAKPGEAADDARARAAQMKTLEELEELLRGFEGCGLRFTAKNLVFADGNPQARVM 183 Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEM 171 +G P ++ GKPF G++G +LD+M+ +I + RT +IS + PW PPGNRN + E+ Sbjct: 184 FVGEAPGADEDRIGKPFMGRSGQLLDRMMAAIGLDRTSAYISNVVPWRPPGNRNPTPQEI 243 Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP-HSIIPTLA 230 ICRP + RQIEL +P IL+ +G + G++ I LA Sbjct: 244 SICRPFVERQIELANPDILVCLGAPATQTLTGTK-DGILKARGRFYPYRLGDGREIRALA 302 Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALK 259 T+HP L++ P+ K+ W LK AL Sbjct: 303 TLHPAYLLRQPVQKRLAWRDFRMLKSALD 331 >gi|223935707|ref|ZP_03627623.1| phage SPO1 DNA polymerase-related protein [bacterium Ellin514] gi|223895715|gb|EEF62160.1| phage SPO1 DNA polymerase-related protein [bacterium Ellin514] Length = 307 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 56/240 (23%), Positives = 99/240 (41%), Gaps = 16/240 (6%) Query: 30 EPNNEATYESQRKEKSIDSAIQPIT--NIRHIHSPLVQQADSIAQKACSLHELKSLLRSF 87 P + A++P I +P+ S K + +L+S S Sbjct: 58 APAVRQAVVAPVPAPVEIPAVKPAALFPISPAETPITVAPLSPEAKVAAFADLRSRAMSC 117 Query: 88 HDC-HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM 146 C HL ++ + + + LM +G P ++ G+PF GK G +L K++Q++ + Sbjct: 118 VKCAHLAASRKNVVFGVGSIDAQLMFVGEAPGADEDEQGEPFVGKAGQLLTKIIQTMGLQ 177 Query: 147 RTQIHISMISPWHPP------GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF 200 R ++I+ I P GNR ++ EM C P + QI+LI PK+L+ +G Sbjct: 178 RGDVYIANILKCRPDTPGQSAGNRKPTSEEMATCIPYLHEQIDLIRPKVLVALGATAVEG 237 Query: 201 FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP--LIKKNTWHALITLKKAL 258 + G W+ IP + T HP L++ K+ W ++ + + L Sbjct: 238 LLG-KTVGITKLRGTWNTY----RGIPLMPTYHPAYLLRNQAMSEKRRVWEDMLAVMEKL 292 >gi|169830501|ref|YP_001716483.1| phage SPO1 DNA polymerase-like protein [Candidatus Desulforudis audaxviator MP104C] gi|169637345|gb|ACA58851.1| phage SPO1 DNA polymerase-related protein [Candidatus Desulforudis audaxviator MP104C] Length = 207 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 42/190 (22%), Positives = 86/190 (45%), Gaps = 5/190 (2%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 +L +L+ ++ +C L + + + LM+IG P ++ G+PF G Sbjct: 15 DGPQALEDLREMMSDCRECGLHAGRTNLVFGEGHPRARLMLIGEGPGAEEDRLGRPFVGA 74 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191 G +LD++L + + RT+++I+ + PPGNR + E + C + +Q LI P +++ Sbjct: 75 AGRLLDRILDAAGLARTEVYIANVVKCRPPGNRVPNREEAQACLRWLRKQFSLIGPPLVV 134 Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 +G+ + G+W + + T HP L++ P K++ W Sbjct: 135 ILGSTALKNLIDP-GASITAWRGQWIV----RGRVRFMPTYHPAALLRDPGKKRDVWRDF 189 Query: 252 ITLKKALKNL 261 ++ A + + Sbjct: 190 QLIRDAYREI 199 >gi|87306738|ref|ZP_01088885.1| DNA polymerase, bacteriophage-type [Blastopirellula marina DSM 3645] gi|87290917|gb|EAQ82804.1| DNA polymerase, bacteriophage-type [Blastopirellula marina DSM 3645] Length = 282 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 75/198 (37%), Gaps = 6/198 (3%) Query: 60 HSPLVQQADSIAQKACSLHELKSLLRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPS 118 + + L L + + C L T T+ + G P Sbjct: 80 RAAPPVLNTDHGGRQQQLDVLAAEVAKCVLCEELACTRTQTVFGVGNPNARICFFGEAPG 139 Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPII 178 ++ G+PF G+ G +L +++++ R ++I PPGNRN + E C P Sbjct: 140 ADEDKQGEPFVGRAGKLLTQIIEACTFQREDVYILNTLKCRPPGNRNPTPEENANCMPYF 199 Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238 +Q+ +I P ++ +G + + G++ + +AT HP L+ Sbjct: 200 EQQLAIIQPDYIVCLGKFAAQNLLKTET-AIGKLRGQFHDY----GGAKVIATYHPAYLL 254 Query: 239 QYPLIKKNTWHALITLKK 256 + P K+ W + + + Sbjct: 255 RNPAAKREVWEDMKMMLR 272 >gi|237748493|ref|ZP_04578973.1| DNA polymerase bacteriophage-type [Oxalobacter formigenes OXCC13] gi|229379855|gb|EEO29946.1| DNA polymerase bacteriophage-type [Oxalobacter formigenes OXCC13] Length = 304 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 86/233 (36%), Gaps = 9/233 (3%) Query: 37 YESQRKEKSIDSAIQPITNIRHIHSP---LVQQADSIAQKACSLHELKSLLRSFHDCHLC 93 + ++ PI + + V +I + L + CHLC Sbjct: 66 FPETLPVEAFADDFPPIPSEMDVSPETGVPVSSPATIPAGGDTWDGLLHEINHCERCHLC 125 Query: 94 STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHI 152 + + + + +G P ++ G+PF G++G++LD M+ ++ + R ++I Sbjct: 126 KSRNKVVPGVGDQHAGWLFVGEGPGFHEDQQGEPFVGRSGHLLDAMMAAMHMKRGENVYI 185 Query: 153 SMISPWH----PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN-DAQ 207 + + +R + E C P + RQI+LI PKI++ +G N Sbjct: 186 ANVVKCRATNEFAKDRQPTEEEAAFCMPYLERQIDLIKPKIMVALGKTAACALLNTGREV 245 Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 K IP + T HP L++ P KK W L T Sbjct: 246 TLGSLRNKTHVFRVAGRRIPLIVTYHPSYLLRTPGGKKQAWQDLCTAMDIYDE 298 >gi|330817462|ref|YP_004361167.1| Phage SPO1 DNA polymerase-related protein [Burkholderia gladioli BSR3] gi|327369855|gb|AEA61211.1| Phage SPO1 DNA polymerase-related protein [Burkholderia gladioli BSR3] Length = 354 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 46/196 (23%), Positives = 83/196 (42%), Gaps = 6/196 (3%) Query: 62 PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121 A + EL++ + C LC T+ D M++G P +++ Sbjct: 155 SAQPAAALASVADLGWDELEARVADCQRCRLCEKRTQTVFGVGDREADWMLVGEAPGENE 214 Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMR 180 + G+PF G+ G +LD ML ++ + R+ +I+ + PPGNRN E+ C P + R Sbjct: 215 DKQGEPFVGQAGKLLDSMLHALSLERSNNVYIANVIKCRPPGNRNPEPDEVARCEPYLQR 274 Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 Q+ L+ PK+++ +G +D G+ +P + + HP L++ Sbjct: 275 QVALVKPKLIVALGRFAAQTLLKSDGSIAS-MRGRVHQYE----GVPVIVSYHPAYLLRS 329 Query: 241 PLIKKNTWHALITLKK 256 K W L + Sbjct: 330 LPDKSKAWADLCLARD 345 >gi|30249369|ref|NP_841439.1| putative DNA polymerase-related protein [Nitrosomonas europaea ATCC 19718] gi|30180688|emb|CAD85309.1| putative DNA polymerase-related protein, bacteriophage-type [Nitrosomonas europaea ATCC 19718] Length = 247 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 59/229 (25%), Positives = 95/229 (41%), Gaps = 6/229 (2%) Query: 34 EATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLC 93 + + S + I + S + L+ ++ C L Sbjct: 18 RPGAIAGQSPDSGKNMSDQIETAAESRPFEESEDRSTSIAHADWGRLRQMVSGCTACPLS 77 Query: 94 STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHI 152 T T+ E D + IG P ++ G+PF G+ G +LD MLQ++ + R ++I Sbjct: 78 QTRKQTVFGVGDEQADWLFIGEGPGAREDELGEPFVGQAGKLLDNMLQAVSLRRGQDVYI 137 Query: 153 SMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN 212 + I PPGNRN + E E CRP ++RQI LI P++++ +G DA Sbjct: 138 ANIVKCRPPGNRNPQDAEAEQCRPYLLRQIALIQPRLIVALGKVAAQNLLATDASIAS-L 196 Query: 213 LGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 G+ S IP + T HP L++ K W L + ++NL Sbjct: 197 RGRLHEF----SGIPLIVTYHPAYLLRSLGDKAKAWEDLCFARDTMRNL 241 >gi|254455581|ref|ZP_05069010.1| uracil-DNA glycosylase, C-terminal domain protein [Candidatus Pelagibacter sp. HTCC7211] gi|207082583|gb|EDZ60009.1| uracil-DNA glycosylase, C-terminal domain protein [Candidatus Pelagibacter sp. HTCC7211] Length = 239 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 1/192 (0%) Query: 70 IAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129 + KA L +L+S + S +C L S + + +M+IG P ++ SG F Sbjct: 45 LGNKADLLKDLQSEINSIENCSLKDNSKNIVLGDGNINSPIMLIGEAPGIEEDKSGSTFK 104 Query: 130 GKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189 G+ G +L+KML +I I R I+ S + PP +R + +E++ + I +I+PKI Sbjct: 105 GEIGELLNKMLLAIGIKRQNIYCSYAINFRPPEDRKPTTLEIKRYSVFLKEHISIINPKI 164 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249 ++ +G+ + + + + GKW + P + + +P LI++P KK +W Sbjct: 165 IILMGSSAMEAVTGINTKISSE-RGKWKETILKNKTYPVMISFNPSYLIRFPENKKYSWE 223 Query: 250 ALITLKKALKNL 261 L +KK + L Sbjct: 224 DLKKIKKKIAEL 235 >gi|312602487|ref|YP_004022332.1| uracil DNA glycosylase superfamily protein [Burkholderia rhizoxinica HKI 454] gi|312169801|emb|CBW76813.1| Uracil DNA glycosylase superfamily protein [Burkholderia rhizoxinica HKI 454] Length = 384 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 53/242 (21%), Positives = 92/242 (38%), Gaps = 16/242 (6%) Query: 26 WVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHS----------PLVQQADSIAQKAC 75 V + PN + L AD+ Sbjct: 139 AVVEVPNARRALAAPVSPAETVPTGLGDARSLQAEPMGGQGEAAAPALGVAADAQPVPML 198 Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 LK+ + C LC +T+ E D M++G P ++++ G+PF G+ G + Sbjct: 199 DWEALKARVAGCTLCRLCERRTNTVFGVGDETADWMLVGEAPGENEDKQGEPFVGQAGKL 258 Query: 136 LDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 LD ML+++++ R ++I+ + PPGNRN E+ C P + RQ+ L+ P +++ +G Sbjct: 259 LDNMLRALQMRRGDNVYIANVLKCRPPGNRNPQPDEVMRCEPYLKRQVALVKPNVIVALG 318 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 DA G+ +P + T HP L++ K W L Sbjct: 319 RFAAQSLLKTDASIAS-LRGRVHEYE----GVPVIVTYHPAYLLRSLHDKHKAWSDLCLA 373 Query: 255 KK 256 + Sbjct: 374 RA 375 >gi|71082815|ref|YP_265534.1| DNA-directed DNA polymerase [Candidatus Pelagibacter ubique HTCC1062] gi|71061928|gb|AAZ20931.1| probable DNA-directed DNA polymerase [Candidatus Pelagibacter ubique HTCC1062] Length = 243 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 61/261 (23%), Positives = 115/261 (44%), Gaps = 23/261 (8%) Query: 2 TSKRILSQEQILTIALFYADSGVYWVFDE-PNNEATYESQRKEKSIDSAIQPITNIRHIH 60 SK++++Q+ F +G ++FDE P N S +K + Sbjct: 1 MSKKVINQKTNFDS-EFLNSTGSDFIFDEKPINRLKNTSNDLKKDL-------------- 45 Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120 + K L LK + S DC+L + S I +M+IG P Sbjct: 46 ------SIQKIDKVKELANLKEQINSISDCNLKNNSKKIILGDGNINSPIMLIGEAPGVE 99 Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180 ++ +G F G+ G++L KML +I I + I+ + + PP +R ++ E++ + + Sbjct: 100 EDNAGLTFMGEVGDLLKKMLIAINIEKQNIYTTYAVNFRPPEDRKPNSTEIKRYSQFLQK 159 Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 I +I+PKI++ +G+ ++ K GKW + ++ + T +P L++ Sbjct: 160 HISIINPKIIILMGSTAMESLTGLNS-KISIERGKWKEVIVKNTSYNVIITFNPSYLLRA 218 Query: 241 PLIKKNTWHALITLKKALKNL 261 P KK++W L +K+ + L Sbjct: 219 PENKKHSWDDLKKIKQKILEL 239 >gi|237793391|ref|YP_002860943.1| uracil-DNA glycosylase [Clostridium botulinum Ba4 str. 657] gi|229263750|gb|ACQ54783.1| uracil-DNA glycosylase [Clostridium botulinum Ba4 str. 657] Length = 190 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 41/186 (22%), Positives = 74/186 (39%), Gaps = 6/186 (3%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 +L + + C L + + +M IG P ++ +G+PF GK G +L Sbjct: 4 WSQLYDECINCNKCTLVKNRTNMVFGEGNISAPIMFIGEAPGADEDRTGRPFVGKAGQLL 63 Query: 137 DKMLQSIEIMRT-QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 K L +++ R +I + P NR E C + Q+ L+ PKI++ +G Sbjct: 64 TKALLALDFKRDEHYYICNVCKCRPENNRTPKEEEAMTCLHYLRNQVALVKPKIMICLGA 123 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 + + + ++ GKW + T HP L + KK W L +++ Sbjct: 124 TALKYIMG-EQFRITRDRGKWIE----RKGYYIMVTFHPAALFRDESKKKLLWQDLKSIR 178 Query: 256 KALKNL 261 + L Sbjct: 179 EKYDEL 184 >gi|224826345|ref|ZP_03699447.1| phage SPO1 DNA polymerase-related protein [Lutiella nitroferrum 2002] gi|224601446|gb|EEG07627.1| phage SPO1 DNA polymerase-related protein [Lutiella nitroferrum 2002] Length = 284 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 6/200 (3%) Query: 63 LVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDN 122 + A+ S EL+ + C LC T T+ +IIG P + ++ Sbjct: 87 AAPTLPAPAKPVLSWDELEQTVARCSHCRLCETRTQTVFGRGNPQARWLIIGEAPGEQED 146 Query: 123 ISGKPFSGKTGNMLDKMLQSIEIM-RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ 181 GKPF G+ G +LD ML +I + ++I+ + PPGNRN S E+ C+ + +Q Sbjct: 147 KQGKPFVGRAGQLLDNMLAAIGLDSNHDVYIANVLKCRPPGNRNPSADEIVACQDYLRQQ 206 Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241 I I P ++L +G +++ + G+ +P + + HP L++ Sbjct: 207 IAHIRPTLILALGRFAAQTLLDSN-DSIARLRGRVHRYQ----DVPMIVSFHPAYLLRNL 261 Query: 242 LIKKNTWHALITLKKALKNL 261 K +W L+ ++ + L Sbjct: 262 PDKAKSWQDLVFARRTFRQL 281 >gi|328953988|ref|YP_004371322.1| phage SPO1 DNA polymerase-related protein [Desulfobacca acetoxidans DSM 11109] gi|328454312|gb|AEB10141.1| phage SPO1 DNA polymerase-related protein [Desulfobacca acetoxidans DSM 11109] Length = 251 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 48/217 (22%), Positives = 96/217 (44%), Gaps = 5/217 (2%) Query: 43 EKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICA 102 + + + +I L ++ Q+ +L E+++ L C L T + Sbjct: 36 KPIVAEPVVKSESIPAPELTLQPASEVPPQEVITLEEVRAELGDCQRCKLWRTRTHLVFG 95 Query: 103 TQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG 162 L+ IG P ++++ G+PF G+ G +L+++L +EI R +++I+ I+ PP Sbjct: 96 AGDPHARLVFIGEAPGEAEDRQGEPFVGRAGQLLNRLLSKLEISRQEVYITNINKCRPPN 155 Query: 163 NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP 222 NR E+ CRP + +Q++ I P++++ +G + A + G W Sbjct: 156 NRTPEADEIAACRPFLWKQLQAIRPQVIVTLGAVAIHALLETKAPLN-RLRGHWQQW--- 211 Query: 223 HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 I + T HP L++ P + TW + + + Sbjct: 212 -RGIAVMPTFHPSYLLRVPQERVKTWEDMQQVLALYR 247 >gi|206890143|ref|YP_002248500.1| uracil-DNA glycosylase, family 4 [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742081|gb|ACI21138.1| uracil-DNA glycosylase, family 4 [Thermodesulfovibrio yellowstonii DSM 11347] Length = 237 Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats. Identities = 42/180 (23%), Positives = 83/180 (46%) Query: 80 LKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKM 139 L ++ C L ++ + +C LM +G P +++ G+PF G+ G +L + Sbjct: 58 LNEEIKKCKKCPLSNSRKNPVCGEGNINAKLMFVGEAPGVDEDLQGRPFVGEAGKLLTSL 117 Query: 140 LQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199 ++ + R ++I+ HPP NR+ E+ C + R+IE+ISP++++ +G Sbjct: 118 IEKMGFKREDVYITNTVKCHPPMNRDPFESEISTCFDYLKREIEIISPQVIISLGKVATY 177 Query: 200 FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 + + ++ K P++ IP + T HP L++ K TW + L+ Sbjct: 178 TLMGMNGKLKDLHISKLRGKVFPYNQIPVIPTFHPAYLLRNKKDKWLTWEDAQEALRRLR 237 >gi|91762762|ref|ZP_01264727.1| probable DNA-directed DNA polymerase [Candidatus Pelagibacter ubique HTCC1002] gi|91718564|gb|EAS85214.1| probable DNA-directed DNA polymerase [Candidatus Pelagibacter ubique HTCC1002] Length = 243 Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats. Identities = 62/261 (23%), Positives = 116/261 (44%), Gaps = 23/261 (8%) Query: 2 TSKRILSQEQILTIALFYADSGVYWVFDE-PNNEATYESQRKEKSIDSAIQPITNIRHIH 60 SK++++Q+ F +G ++FDE P N S +K + Sbjct: 1 MSKKVINQKTNFDS-EFLNSTGSDFIFDEKPINRLKNTSNDLKKDL-------------- 45 Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120 + K L LK + S DC+L + S I +MIIG P Sbjct: 46 ------SIQKIDKVKELENLKEQINSISDCNLKNNSKKIILGDGNINSLIMIIGEAPGIE 99 Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180 ++ +G F G+ G++L KML +I I + I+ + + PP +R ++ E++ + + Sbjct: 100 EDNAGLTFMGEVGDLLKKMLIAINIKKQNIYATYAVNFRPPEDRKPNSTEIKRYSQFLQK 159 Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 I +I+PKI++ +G+ ++ K GKW + ++ + T +P L++ Sbjct: 160 HISIINPKIIILMGSTAMESLTGLNS-KISIERGKWKEVIIKNTSYNVIITFNPSYLLRA 218 Query: 241 PLIKKNTWHALITLKKALKNL 261 P KK++W L +K+ + +L Sbjct: 219 PENKKHSWDDLKKIKQKILDL 239 >gi|118578530|ref|YP_899780.1| phage SPO1 DNA polymerase-like protein [Pelobacter propionicus DSM 2379] gi|118501240|gb|ABK97722.1| phage SPO1 DNA polymerase-related protein [Pelobacter propionicus DSM 2379] Length = 264 Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats. Identities = 49/247 (19%), Positives = 91/247 (36%), Gaps = 18/247 (7%) Query: 7 LSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQ 66 L + +SGV + S + P SP Q Sbjct: 9 LVTASLRAYLQGLQESGVDGI---------PASLAGISPATAVEIPPDTPPEPDSPAATQ 59 Query: 67 ADSIAQKA----CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDN 122 A SL ++S L C L +T + T L+ G P ++ Sbjct: 60 APQAVAPPVVERESLEIIRSDLGECQRCKLGATRTHLVFGTGNPRARLVFAGEGPGRDED 119 Query: 123 ISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQI 182 + G+PF G+ G +L++++ ++ + R ++I + PPGNR+ E+ C ++RQ+ Sbjct: 120 LQGEPFVGEAGQVLNRIITAMGLKREDVYICNLVKCRPPGNRDPEADEIAACSTFLLRQL 179 Query: 183 ELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL 242 I+P++++ +G + + G + IP + T HP L++ Sbjct: 180 RSINPEVIVALGKFAAQTLLATK-EPISRLRGTFGEF----HGIPLMPTFHPSYLLRNRG 234 Query: 243 IKKNTWH 249 W Sbjct: 235 NSAPFWE 241 >gi|253999990|ref|YP_003052053.1| phage SPO1 DNA polymerase-like protein [Methylovorus sp. SIP3-4] gi|253986669|gb|ACT51526.1| phage SPO1 DNA polymerase-related protein [Methylovorus sp. SIP3-4] Length = 377 Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats. Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 6/202 (2%) Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120 + + Q + L+S + + C L T T+ + +I+G P Sbjct: 166 ATSLGQGRRDSIAQLDWQGLQSCVANCQACSLSRTRTQTVFGVGDPAAEWLIVGEAPGAE 225 Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIM 179 ++ G+PF G+ G +LD ML +I++ R ++I+ + PP NR+ E++ C P + Sbjct: 226 EDKRGEPFVGQAGQLLDNMLGAIQLKRGQNVYIANVLKCRPPQNRDPQGEEVQQCDPFLK 285 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 RQ+ELI PK++L +G N+DA G+ +P + T HP L++ Sbjct: 286 RQVELIKPKLILALGKFAAQSLLNSDATIGS-MRGRQHEYN----GVPVIVTYHPAYLLR 340 Query: 240 YPLIKKNTWHALITLKKALKNL 261 + K W L + ++ L Sbjct: 341 NLMDKAKAWEDLCLARATMRKL 362 >gi|20806609|ref|NP_621780.1| Uracil-DNA glycosylase [Thermoanaerobacter tengcongensis MB4] gi|20515053|gb|AAM23384.1| Uracil-DNA glycosylase [Thermoanaerobacter tengcongensis MB4] Length = 186 Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats. Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 5/185 (2%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L EL C L T + + +M +G P +++ G+PF G+ G +L Sbjct: 6 LKELYLACLHCTKCDLHKTKTNMVFGEGNLRAKVMFVGEGPGRDEDLQGRPFVGRAGQLL 65 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 +KML+ + + R +++I+ + PP NR E++ C P + Q+ +I+PKI++ +G Sbjct: 66 NKMLEDVGLKREEVYIANVVKCRPPNNRVPLQSEIDACLPYLRNQVAIIAPKIIVCLGAT 125 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 + D + T G+W + +AT HP +++ P + +K+ Sbjct: 126 AAKAIIDKDFKITT-MRGQWFE----RKGVKIIATYHPAAILRDPEKLQPAMEDFKKIKE 180 Query: 257 ALKNL 261 L L Sbjct: 181 ELDKL 185 >gi|332796184|ref|YP_004457684.1| phage SPO1 DNA polymerase-like protein [Acidianus hospitalis W1] gi|332693919|gb|AEE93386.1| phage SPO1 DNA polymerase-related protein [Acidianus hospitalis W1] Length = 207 Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats. Identities = 44/188 (23%), Positives = 81/188 (43%), Gaps = 3/188 (1%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 SL E+ +R C L T + + ++M+IG P +++ G+PF G G + Sbjct: 2 SLEEIAKQVRECTKCKLHLTRKNAVPGEGNPSAEIMLIGEAPGANEDEEGRPFVGAAGKL 61 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 L ++L SI + R + I+ + PP NR+ E+ C P + QI +I PKI++ +G Sbjct: 62 LTELLSSIGLNRKDVFITNLVKCRPPNNRDPEEDEIIACSPYLDEQIRIIKPKIIVTLGK 121 Query: 196 KTKNFFFNN---DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 + + + GK+ + I T HP + P ++ + Sbjct: 122 HSTTYILGKIGIKVKSISAVRGKFFTWNYGNVTISVFPTYHPAAALYNPSLRDELFSDFK 181 Query: 253 TLKKALKN 260 + + L + Sbjct: 182 KISERLNS 189 >gi|225181124|ref|ZP_03734570.1| phage SPO1 DNA polymerase-related protein [Dethiobacter alkaliphilus AHT 1] gi|225168093|gb|EEG76898.1| phage SPO1 DNA polymerase-related protein [Dethiobacter alkaliphilus AHT 1] Length = 222 Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 5/200 (2%) Query: 60 HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSD 119 V + ++ ++ L + C L S + + DL+ +G P Sbjct: 25 KPAKVFAPLPVVEQPQTIAALSKDVLDCAQCGLRSQATQVVFGEGNPDADLLFVGEAPGA 84 Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIM 179 ++ G+PF G+ G +L+K+L + EI R +++I+ + PP NR + E C + Sbjct: 85 EEDAQGRPFVGEAGKLLNKILAAAEISREEVYITNVVKCRPPKNRTPNPDEAAACSEHLQ 144 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 +QI L+ P+I++ +G+ + A+ G+W + +AT HP L++ Sbjct: 145 KQIALLKPRIVVCLGSLATQALIDPQARV-SAVRGRWFT----KDGLQMMATFHPAALLR 199 Query: 240 YPLIKKNTWHALITLKKALK 259 P K+ W + ++ A + Sbjct: 200 DPSRKRPVWEDIQKIRDAYR 219 >gi|161524407|ref|YP_001579419.1| phage SPO1 DNA polymerase-like protein [Burkholderia multivorans ATCC 17616] gi|189350838|ref|YP_001946466.1| bacteriophage-type DNA polymerase [Burkholderia multivorans ATCC 17616] gi|160341836|gb|ABX14922.1| phage SPO1 DNA polymerase-related protein [Burkholderia multivorans ATCC 17616] gi|189334860|dbj|BAG43930.1| bacteriophage-type DNA polymerase [Burkholderia multivorans ATCC 17616] Length = 358 Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats. Identities = 52/235 (22%), Positives = 88/235 (37%), Gaps = 6/235 (2%) Query: 23 GVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKS 82 G + D A + +A L + Sbjct: 113 GALTAIMSAPAASPSADMPPAADDDFAWFDAAPPGDSATAAEPRAAEAPVAMLDWDALAA 172 Query: 83 LLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142 + C LC +T+ D M+IG P ++++ G+PF G+ G +LD ML+S Sbjct: 173 RVADCTRCRLCEKRTNTVFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLLDNMLRS 232 Query: 143 IEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 + + R ++I+ + PPGNRN E+ C P + RQ+ L+ PK+++ +G Sbjct: 233 LSLQRGENVYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVALVKPKLIVALGRFAAQTL 292 Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 DA G+ +P + T HP L++ K W L + Sbjct: 293 LKTDASIAS-LRGRVHAYE----GVPVIVTYHPAYLLRSLPDKAKAWADLCLARD 342 >gi|238026879|ref|YP_002911110.1| phage SPO1 DNA polymerase-like protein [Burkholderia glumae BGR1] gi|237876073|gb|ACR28406.1| Phage SPO1 DNA polymerase-related protein [Burkholderia glumae BGR1] Length = 362 Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats. Identities = 50/237 (21%), Positives = 91/237 (38%), Gaps = 8/237 (3%) Query: 25 YWVFDEPNNEATYESQRKEKSIDSAIQ--PITNIRHIHSPLVQQADSIAQKACSLHELKS 82 + S P+++ H P EL++ Sbjct: 121 DTAAPAGAADQMPPDADPSLEDPSWFDLVPMSDAGHSFEPAEPAVARSPVAGLGWDELEA 180 Query: 83 LLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142 + C LC T+ D M+IG P ++++ G+PF G+ G +LD ML + Sbjct: 181 RVAECRRCRLCEKRTRTVFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLLDSMLHA 240 Query: 143 IEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 + + R ++I+ + PPGNRN E+ C P + RQ+EL+ PK+++ +G Sbjct: 241 LSLKRGENVYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVELVKPKLIVAMGRFAAQTL 300 Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 + G+ + +P + + HP L++ K W L + + Sbjct: 301 LKSTGSIAS-MRGRIHHYE----GVPVVVSYHPAYLLRSLPDKAKAWADLCLARDTI 352 >gi|327537178|gb|EGF23927.1| phage SPO1 DNA polymerase-related protein [Rhodopirellula baltica WH47] Length = 321 Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats. Identities = 52/235 (22%), Positives = 94/235 (40%), Gaps = 13/235 (5%) Query: 30 EPNNEAT-------YESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKS 82 EP +A+ E + ++ + +QP+ + P + IA++ L L S Sbjct: 87 EPPPQASAGGSSIGPEVKTPPRAPEGRLQPVESFSASDDPYPGTSLPIAERENQLTNLAS 146 Query: 83 LLRSFHDCHL-CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 ++ C L T+ G P ++ G+PF GK G +LDKM+Q Sbjct: 147 VVAGCTKCTLLAKCRTQTVFGEGNPAARFAFFGEAPGADEDRLGRPFIGKAGQLLDKMVQ 206 Query: 142 SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 + ++ R I++ PP NRN E+ CR +Q++++ P+ ++ +G + + Sbjct: 207 ACKLQREDIYLLNTVKCRPPENRNPEPTELANCREYFEQQLQILRPEYIVCLGAVSAHSL 266 Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 G+ + L HP L++ P KK W L L + Sbjct: 267 LKTKLSI-----GRLRQRFHQYHESKVLVIYHPAYLLRNPDAKKAAWADLQMLMR 316 >gi|302877854|ref|YP_003846418.1| phage SPO1 DNA polymerase-related protein [Gallionella capsiferriformans ES-2] gi|302580643|gb|ADL54654.1| phage SPO1 DNA polymerase-related protein [Gallionella capsiferriformans ES-2] Length = 324 Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats. Identities = 44/237 (18%), Positives = 88/237 (37%), Gaps = 12/237 (5%) Query: 30 EPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQK-------ACSLHELKS 82 P ++ + + + K EL+ Sbjct: 89 SPLSQDAGNAIEVQAPVVDLFASDFQFAAPGEAADNSLREFQLKNSGGLLGTTDWPELQQ 148 Query: 83 LLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142 ++ +C L + + T + +G P ++ +PF G +G +LD ML + Sbjct: 149 KVQGCTECKLRAECTQPVFGTGDPHARWLFVGEAPGAEEDELCEPFVGASGRLLDNMLLA 208 Query: 143 IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202 I + R++++++ + P +R+ E+ C P + RQI L+ P +++ +G + Sbjct: 209 IGLQRSEVYLANVIKCRPLDDRHPHVGEIAACLPYLKRQIGLLQPAVIVALGKTAASALL 268 Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 + DA G + IP + T HP L++ PL K W L + + Sbjct: 269 DTDATIAS-LRGIVHDY----KGIPLVVTYHPAYLLRSPLEKARAWQDLCLAVQTMD 320 >gi|168182317|ref|ZP_02616981.1| uracil-DNA glycosylase [Clostridium botulinum Bf] gi|182674592|gb|EDT86553.1| uracil-DNA glycosylase [Clostridium botulinum Bf] Length = 190 Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 75/186 (40%), Gaps = 6/186 (3%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 +L + + C L + + +M IG P ++ +G+PF GK G +L Sbjct: 4 WSQLYDECINCNKCTLVKNRTNMVFGEGNISAPIMFIGEAPGADEDRTGRPFVGKAGQLL 63 Query: 137 DKMLQSIEIMRT-QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 K L +++ R +I + P NR E C + Q+ L+ PKI++ +G Sbjct: 64 TKALLALDFKRDEHYYICNVCKCRPENNRTPKEEEAMTCLHYLRNQVALVKPKIMICLGA 123 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 + + + ++ GKW +AT HP L + KK W L +++ Sbjct: 124 TALKYIMG-EQFRITRDRGKWIE----RKGYYIMATFHPAALFRDESKKKLLWQDLKSIR 178 Query: 256 KALKNL 261 + L Sbjct: 179 EKYDEL 184 >gi|15639221|ref|NP_218669.1| DNA polymerase [Treponema pallidum subsp. pallidum str. Nichols] gi|189025462|ref|YP_001933234.1| DNA polymerase, bacteriophage-type [Treponema pallidum subsp. pallidum SS14] gi|3322496|gb|AAC65215.1| DNA polymerase, bacteriophage-type [Treponema pallidum subsp. pallidum str. Nichols] gi|189018037|gb|ACD70655.1| DNA polymerase, bacteriophage-type [Treponema pallidum subsp. pallidum SS14] Length = 277 Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats. Identities = 53/239 (22%), Positives = 90/239 (37%), Gaps = 15/239 (6%) Query: 32 NNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKAC--------SLHELKSL 83 + E DS I P + ++A S A + L+ Sbjct: 37 LDLFRTEGIGPRPRNDSVILP-NAACSPRNHAGKRAQSTADACVRSSDGSVYTDETLREE 95 Query: 84 LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143 + + C L + D++++G P ++ SG+PF G++G +LD ML +I Sbjct: 96 IFACRACELYQRRTHAVVGEGVADADVLVVGEAPGAEEDRSGRPFVGRSGKLLDAMLAAI 155 Query: 144 EIMRTQ-IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202 + R Q +I+ + PP NR + E C + + L P +L +G Sbjct: 156 GLSRQQNCYITNVVKCRPPRNRTPTPHETACCARFLHAHLTLHRPCAILVLGRCAAQHML 215 Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + G++ IP LAT HP L++ +K+ W L T + L L Sbjct: 216 Q-TTDGIGKLRGRFFTYQ----GIPLLATYHPSALLRDEALKRPAWEDLKTFRARLLQL 269 >gi|218960625|ref|YP_001740400.1| Uracil-DNA glycosylase [Candidatus Cloacamonas acidaminovorans] gi|167729282|emb|CAO80193.1| Uracil-DNA glycosylase [Candidatus Cloacamonas acidaminovorans] Length = 217 Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats. Identities = 63/255 (24%), Positives = 102/255 (40%), Gaps = 44/255 (17%) Query: 7 LSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQ 66 +S + F +SG+ ++ P Sbjct: 1 MSVNALRQYLEFLKNSGIKELYYPP----------------------------------- 25 Query: 67 ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126 + K L EL+ + C L ++ + M+IG P + ++I+G+ Sbjct: 26 ----SDKQKKLTELQKQYSTCTKCPLHNSRRKFVYGEGNPNAIAMLIGEGPGEQEDITGR 81 Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186 PF G G +L+KML +I + R+ ++I+ I PPGNRN + E + C P ++ QI++I Sbjct: 82 PFVGAAGQLLEKMLSAINLQRSDVYITNIVKCRPPGNRNPESEERKACLPYLLEQIQIIQ 141 Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKN 246 PKILL +G NN+ + GK IP T HP L++ KK Sbjct: 142 PKILLILGLVAAQTLLNNNNTL-GWHRGKIHYFM----DIPAFVTYHPSALLRNQEWKKP 196 Query: 247 TWHALITLKKALKNL 261 W L +K + L Sbjct: 197 AWIDLQEFQKEYEKL 211 >gi|51894053|ref|YP_076744.1| Uracil-DNA glycosylase [Symbiobacterium thermophilum IAM 14863] gi|51857742|dbj|BAD41900.1| Uracil-DNA glycosylase [Symbiobacterium thermophilum IAM 14863] Length = 206 Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats. Identities = 47/191 (24%), Positives = 83/191 (43%), Gaps = 6/191 (3%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 + ++ L +++ C L + + LM IG P ++ G+PF G+ Sbjct: 11 DRIPTMEALAEVVKGCQRCGLRAGCTQVVFGEGVWPAGLMCIGEGPGADEDRLGRPFVGR 70 Query: 132 TGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 G +LD++L+ R +I+ I PPGNR E + C P + QI L+ PKI+ Sbjct: 71 AGQLLDRILEVSGFDRKRNCYIANIVKCRPPGNRAPEPAERQACWPYLRAQIRLVRPKII 130 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 + +G + A + + G+W I + T HP L++ P KK+ W+ Sbjct: 131 VLLGATALQGIIDPSA-RITRMRGQWIERE----GIHFMPTYHPAALLRDPSKKKDVWND 185 Query: 251 LITLKKALKNL 261 + + + L Sbjct: 186 MKQVIARYREL 196 >gi|193215644|ref|YP_001996843.1| phage SPO1 DNA polymerase-like protein [Chloroherpeton thalassium ATCC 35110] gi|193089121|gb|ACF14396.1| phage SPO1 DNA polymerase-related protein [Chloroherpeton thalassium ATCC 35110] Length = 208 Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats. Identities = 52/203 (25%), Positives = 83/203 (40%), Gaps = 5/203 (2%) Query: 58 HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117 + + QK +L L + C L + E L++IG P Sbjct: 8 NAEQSEPLSPEEALQKYKTLSALYDATKDCKKCQLGELRTKYVFGEGNERAKLVLIGEAP 67 Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177 ++ G+PF G++G +L K++++I R +I+I I PP NR E+ C P Sbjct: 68 GADEDAQGRPFVGRSGQLLTKIMEAIHFSREEIYICNILKCRPPNNREPQADEVAACLPH 127 Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237 + RQ+E+I PKI+L +G N + Q GK T HP L Sbjct: 128 LYRQLEIIKPKIILALGRVAANVLL-ENKQSMSAMRGKVIKWRNSD----VFVTYHPAAL 182 Query: 238 IQYPLIKKNTWHALITLKKALKN 260 ++ P K+ W + LK+ Sbjct: 183 LRNPNWKRLCWEDVQALKRHYDE 205 >gi|32473807|ref|NP_866801.1| DNA polymerase [Rhodopirellula baltica SH 1] gi|32444343|emb|CAD74341.1| DNA polymerase, bacteriophage-type [Rhodopirellula baltica SH 1] Length = 321 Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats. Identities = 49/221 (22%), Positives = 89/221 (40%), Gaps = 6/221 (2%) Query: 37 YESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHL-CST 95 E + ++ + +QP+ + P + IA++ L L S++ C L Sbjct: 101 PEVKTPPRAPEGRLQPVESFSACDDPYPGTSLPIAERENQLTNLASVVAGCTKCTLLAKC 160 Query: 96 SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMI 155 T+ G P ++ G+PF GK G +LDKM+Q+ ++ R I++ Sbjct: 161 RTQTVFGEGNPAARFAFFGEAPGADEDRLGRPFIGKAGQLLDKMVQACKLQREDIYLLNT 220 Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK 215 PP NRN E+ CR +Q++++ P+ ++ +G + + G+ Sbjct: 221 VKCRPPENRNPEPTELANCREYFEQQLQILRPEYIVCLGAVSAHSLLKTKLSI-----GR 275 Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 + L HP L++ P KK W L L + Sbjct: 276 LRQRFHQYHESKVLVIYHPAYLLRNPDAKKAAWADLQMLMR 316 >gi|270159414|ref|ZP_06188070.1| uracil-DNA glycosylase family 4 protein [Legionella longbeachae D-4968] gi|289165775|ref|YP_003455913.1| C-terminal part of DNA polymerase, bacteriophage-type [Legionella longbeachae NSW150] gi|269987753|gb|EEZ94008.1| uracil-DNA glycosylase family 4 protein [Legionella longbeachae D-4968] gi|288858948|emb|CBJ12874.1| putative C-terminal part of DNA polymerase, bacteriophage-type [Legionella longbeachae NSW150] Length = 211 Score = 178 bits (450), Expect = 8e-43, Method: Composition-based stats. Identities = 57/186 (30%), Positives = 88/186 (47%), Gaps = 5/186 (2%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + S C L T T+ E LMI+G P ++ G PF GK G Sbjct: 28 KDLSSLAKEVSSCTRCPLHKTRTQTVFYRGHEKAKLMIVGEAPGFYEDQQGLPFVGKAGG 87 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 +L++ML+SIE++ ++I+ + PP NR+ E+ C ++RQIEL+ P ++L +G Sbjct: 88 LLNQMLRSIEMVEKDVYIANVLKCRPPDNRDPHLDEIAQCSSFLVRQIELVKPHLILALG 147 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 F N Q + IP + + HP L++ P KK T+ L+T+ Sbjct: 148 RFAGQFLLN-KPLSLKQLRNTIHHYNN----IPFIVSYHPAYLLRNPSDKKKTYIDLLTV 202 Query: 255 KKALKN 260 KK L Sbjct: 203 KKLLAE 208 >gi|255020844|ref|ZP_05292900.1| putative DNA polymerase-like protein, bacteriophage type [Acidithiobacillus caldus ATCC 51756] gi|254969635|gb|EET27141.1| putative DNA polymerase-like protein, bacteriophage type [Acidithiobacillus caldus ATCC 51756] Length = 297 Score = 178 bits (450), Expect = 8e-43, Method: Composition-based stats. Identities = 51/221 (23%), Positives = 87/221 (39%), Gaps = 7/221 (3%) Query: 35 ATYESQRKEKSIDSAIQPITNIRHIHSPL-VQQADSIAQKACSLHELKSLLRSFHDCHLC 93 + + +P+ P Q A A LK + + C L Sbjct: 74 TAALVIDPASAEEQEHEPLAVEPMEVMPADRDQVRRQAISAMDWQALKERIETCRACSLG 133 Query: 94 STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHI 152 ST + + + +G P ++ G+ F G+ G +LD ML ++ + R +++I Sbjct: 134 STRQNAVVGAGSPEGSWCFVGEAPGAEEDRRGEAFVGRGGQLLDAMLAAMSLSRAREVYI 193 Query: 153 SMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN 212 + + PP NR+ E+ C P + RQI L+ P+IL+ +G + Q Sbjct: 194 ANVLKCRPPNNRDPLGPEVRSCLPYLERQIALVQPRILVALGRFAAQSLLQ-TSTPIGQL 252 Query: 213 LGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253 G+ IP + T HP L++ PL K+ W L Sbjct: 253 RGRVWEY----RGIPLVVTYHPAYLLRNPLEKRKVWEDLKL 289 >gi|269792546|ref|YP_003317450.1| phage SPO1 DNA polymerase-like protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100181|gb|ACZ19168.1| phage SPO1 DNA polymerase-related protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 196 Score = 178 bits (450), Expect = 9e-43, Method: Composition-based stats. Identities = 46/198 (23%), Positives = 89/198 (44%), Gaps = 10/198 (5%) Query: 69 SIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128 S+ ++ L ++++ S C LCS+ + + LM +G P ++ G PF Sbjct: 2 SLEDRSLMLEQIRNRALSCERCGLCSSRTNVVFGEGVLEGGLMFVGEGPGADEDQQGVPF 61 Query: 129 SGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188 G+ G +L ++L + I R Q++I+ + PPGNR + EM C + QI L+ P+ Sbjct: 62 VGRAGQLLTQILSAAGISRDQVYITNVVKCRPPGNRVPTYEEMMACDQFLQAQILLVRPR 121 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI----- 243 +L+ +G+ + + + G+W + + HP L++ P Sbjct: 122 LLVLLGSTPTKWILK-TQEAISKLRGQWFQW----RGMEVMPMFHPSYLLRNPSNKVGSP 176 Query: 244 KKNTWHALITLKKALKNL 261 K TW + +K+ ++ Sbjct: 177 KHLTWEDIQEVKRRWDSV 194 >gi|254563580|ref|YP_003070675.1| phage DNA polymerase [Methylobacterium extorquens DM4] gi|254270858|emb|CAX26863.1| putative phage DNA polymerase [Methylobacterium extorquens DM4] Length = 344 Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 69/230 (30%), Positives = 105/230 (45%), Gaps = 2/230 (0%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P R + + A + A + +L EL+ LLR F C Sbjct: 110 PLEFRRELPSRDAPAREPPRTYGNAAGAKPGEAADDARARAAQMKTLEELEELLRGFEGC 169 Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150 L T+ + + A +M +G P ++ GKPF G++G +LD+M+ +I + RT Sbjct: 170 GLRFTAKNLVFADGNPQARVMFVGEAPGADEDRIGKPFMGRSGQLLDRMMAAIGLDRTSA 229 Query: 151 HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210 +IS + PW PPGNRN + E+ ICRP + RQIEL +P IL+ +G Sbjct: 230 YISNVVPWRPPGNRNPTPQEISICRPFVERQIELANPDILVCLGAPATQTLTGTK-DGIL 288 Query: 211 QNLGKWSNLCTP-HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 + G++ I LAT+HP L++ P+ K+ W LK AL Sbjct: 289 KARGRFYPYRLGDGREIRALATLHPAYLLRQPVQKRLAWRDFRMLKSALD 338 Score = 40.9 bits (94), Expect = 0.21, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Query: 1 MTSKRILSQE--QILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPIT 54 MT+ + +++ F+ +GV V DE ++ E++ S +P T Sbjct: 4 MTANHADTDARGDLISYLDFHVAAGVDAVLDEQPHDRFAEAESVRADAASQAEPAT 59 >gi|307729307|ref|YP_003906531.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp. CCGE1003] gi|307583842|gb|ADN57240.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp. CCGE1003] Length = 342 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 56/245 (22%), Positives = 93/245 (37%), Gaps = 19/245 (7%) Query: 26 WVFDEPNNEATYESQRKEKSIDSAIQPITNIR----------HIHSPLVQQADSIAQKA- 74 A+ + Q + + P +H P A A A Sbjct: 89 EPQRATPGTASGDPQPAQARPSADPFPFDAPPDDGFAWFDDLPLHPPGESDAAVPALPAI 148 Query: 75 --CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 L + + C LC T+ D M+IG P ++++ G+PF G+ Sbjct: 149 NTLDWDALSERVATCERCRLCEKRTKTVFGVGDREADWMLIGEAPGENEDRVGEPFVGQA 208 Query: 133 GNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191 G +LD ML+S+ + R ++I+ + PPGNRN E+ C P + RQ+ L+ PK+++ Sbjct: 209 GKLLDNMLRSLTLARGANVYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVALVKPKLIV 268 Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 +G DA G+ +P + T HP L++ K W L Sbjct: 269 ALGRFAAQSLLKTDA-SISSLRGRVHEYE----GVPVVVTYHPAYLLRSLPDKAKAWADL 323 Query: 252 ITLKK 256 + Sbjct: 324 CLARD 328 >gi|148378081|ref|YP_001252622.1| uracil-DNA glycosylase [Clostridium botulinum A str. ATCC 3502] gi|153933715|ref|YP_001382480.1| uracil-DNA glycosylase [Clostridium botulinum A str. ATCC 19397] gi|153935117|ref|YP_001386032.1| uracil-DNA glycosylase [Clostridium botulinum A str. Hall] gi|148287565|emb|CAL81629.1| putative uracil-DNA glycosylase [Clostridium botulinum A str. ATCC 3502] gi|152929759|gb|ABS35259.1| uracil-DNA glycosylase [Clostridium botulinum A str. ATCC 19397] gi|152931031|gb|ABS36530.1| uracil-DNA glycosylase [Clostridium botulinum A str. Hall] Length = 190 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 6/186 (3%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 +L + + C L + + +M IG P ++ +G+PF GK G +L Sbjct: 4 WSQLYDECINCNKCTLVKNRTNMVFGEGNISAPIMFIGEAPGADEDRTGRPFVGKAGQLL 63 Query: 137 DKMLQSIEIMRT-QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 K L +++ R +I + P NR E C P + Q+ L+ PKI++ +G Sbjct: 64 TKALLALDFKRDEHYYICNVCKCRPENNRTPKEEEAMTCLPYLRNQVALVKPKIMICLGA 123 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 + + + ++ GKW +AT HP L + KK W L +++ Sbjct: 124 TALKYIMG-EQFRITRDRGKWIE----RKGYYIMATFHPAALFRDESKKKLLWQDLKSIR 178 Query: 256 KALKNL 261 + L Sbjct: 179 EKYDEL 184 >gi|22299499|ref|NP_682746.1| hypothetical protein tll1956 [Thermosynechococcus elongatus BP-1] gi|22295682|dbj|BAC09508.1| tll1956 [Thermosynechococcus elongatus BP-1] Length = 235 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 59/238 (24%), Positives = 100/238 (42%), Gaps = 13/238 (5%) Query: 30 EPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHD 89 EP + ++S + + + P+ + PL + A +L L + Sbjct: 3 EPLQFSLFDSPTEAEPAPAT--PLDPATYDQIPLRAEVPIPAGTYRNLEALAVHCQQCQR 60 Query: 90 CHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM-RT 148 C L +T + + LMIIG P +++ SG+PF GK G +LDK+L S+ + Sbjct: 61 CGLAATRTHVVVSRGNPAAKLMIIGEGPGQAEDESGRPFVGKAGQLLDKILASVNLDSER 120 Query: 149 QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQK 208 +I I PPGNR + IE C P ++ QI L++P+I+L G + D + Sbjct: 121 DAYICNIVKCRPPGNRVPTPIEAAACIPYLLEQIRLVNPRIILLAGATAVSGLLK-DHRG 179 Query: 209 TYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWHALITLKKALKNL 261 + G+W + HP L++ K TW + ++ L+ L Sbjct: 180 ITKIRGQWIEWQGRW----CMPIFHPAYLLRNNSREPGSPKWLTWQDIQAVRDRLRQL 233 >gi|194337589|ref|YP_002019383.1| phage SPO1 DNA polymerase-related protein [Pelodictyon phaeoclathratiforme BU-1] gi|194310066|gb|ACF44766.1| phage SPO1 DNA polymerase-related protein [Pelodictyon phaeoclathratiforme BU-1] Length = 203 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 5/200 (2%) Query: 62 PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121 P V + A + L L R C L T L+ + L +IG P + Sbjct: 2 PPVSCVEEPASSSQELALLFETARKCRKCQLAETRLNFVFGEGDPAAKLAVIGEAPGAEE 61 Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ 181 + SG+PF G++G +LDK+LQ+ R +++I I PPGNRN E+E C P ++ Q Sbjct: 62 DASGRPFVGRSGQLLDKILQAAGFNRPEVYICNILKCRPPGNRNPLPDEIENCIPWLLEQ 121 Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241 +++++PK++L +G N F N LG T HP L++ P Sbjct: 122 LQIVNPKVILILGKVAANTIFENKLS-----LGSMRGKAIKWKGYDCFITYHPAALLRNP 176 Query: 242 LIKKNTWHALITLKKALKNL 261 K+ W + + + + Sbjct: 177 EWKRGCWDDIQLMMRHYATI 196 >gi|153940469|ref|YP_001389438.1| uracil-DNA glycosylase [Clostridium botulinum F str. Langeland] gi|168177407|ref|ZP_02612071.1| uracil-DNA glycosylase [Clostridium botulinum NCTC 2916] gi|170756172|ref|YP_001779700.1| uracil-DNA glycosylase [Clostridium botulinum B1 str. Okra] gi|226947298|ref|YP_002802389.1| uracil-DNA glycosylase [Clostridium botulinum A2 str. Kyoto] gi|152936365|gb|ABS41863.1| uracil-DNA glycosylase [Clostridium botulinum F str. Langeland] gi|169121384|gb|ACA45220.1| uracil-DNA glycosylase [Clostridium botulinum B1 str. Okra] gi|182671008|gb|EDT82982.1| uracil-DNA glycosylase [Clostridium botulinum NCTC 2916] gi|226842858|gb|ACO85524.1| uracil-DNA glycosylase [Clostridium botulinum A2 str. Kyoto] gi|322804346|emb|CBZ01896.1| uracil-DNA glycosylase, family 4 [Clostridium botulinum H04402 065] Length = 190 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 6/186 (3%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 +L + + C L + + +M IG P ++ +G+PF GK G +L Sbjct: 4 WSQLYDECINCNKCTLVKNRTNMVFGEGNISAPIMFIGEAPGADEDRTGRPFVGKAGQLL 63 Query: 137 DKMLQSIEIMRT-QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 K L +++ R +I + P NR E C P + Q+ L+ PKI++ +G Sbjct: 64 TKALLALDFKRDEHYYICNVCKCRPENNRTPKEEEAMTCLPYLRNQVALVKPKIMICLGA 123 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 + + + ++ GKW +AT HP L + KK W L +++ Sbjct: 124 TALKYIMG-EQFRITRDRGKWIE----RKGYYIMATFHPAALFRDESKKKLLWQDLKSIR 178 Query: 256 KALKNL 261 + L Sbjct: 179 EKYDEL 184 >gi|291059633|gb|ADD72368.1| DNA polymerase, bacteriophage-type [Treponema pallidum subsp. pallidum str. Chicago] Length = 270 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 53/239 (22%), Positives = 90/239 (37%), Gaps = 15/239 (6%) Query: 32 NNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKAC--------SLHELKSL 83 + E DS I P + ++A S A + L+ Sbjct: 30 LDLFRTEGIGPRPRNDSVILP-NAACSPRNHAGKRAQSTADACVRSSDGSVYTDETLREE 88 Query: 84 LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143 + + C L + D++++G P ++ SG+PF G++G +LD ML +I Sbjct: 89 IFACRACELYQRRTHAVVGEGVADADVLVVGEAPGAEEDRSGRPFVGRSGKLLDAMLAAI 148 Query: 144 EIMRTQ-IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202 + R Q +I+ + PP NR + E C + + L P +L +G Sbjct: 149 GLSRQQNCYITNVVKCRPPRNRTPTPHETACCARFLHAHLTLHRPCAILVLGRCAAQHML 208 Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + G++ IP LAT HP L++ +K+ W L T + L L Sbjct: 209 Q-TTDGIGKLRGRFFTYQ----GIPLLATYHPSALLRDEALKRPAWEDLKTFRARLLQL 262 >gi|170760011|ref|YP_001785403.1| uracil-DNA glycosylase [Clostridium botulinum A3 str. Loch Maree] gi|169407000|gb|ACA55411.1| uracil-DNA glycosylase [Clostridium botulinum A3 str. Loch Maree] Length = 190 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 6/186 (3%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 +L + + C L + + +M IG P ++ +G+PF GK G +L Sbjct: 4 WSQLYDECINCNKCTLVKNRTNMVFGEGNISAPIMFIGEAPGADEDRTGRPFVGKAGQLL 63 Query: 137 DKMLQSIEIMRT-QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 K L +++ R +I + P NR E C P + Q+ LI PKI++ +G Sbjct: 64 TKALLALDFKRDEHYYICNVCKCRPENNRTPKEEEAMTCLPYLRNQVALIKPKIMICLGA 123 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 + + + ++ GKW +AT HP L + KK W L +++ Sbjct: 124 TALKYIMG-EQFRITRDRGKWIE----RKGYYIMATFHPAALFRDESKKKLLWQDLKSIR 178 Query: 256 KALKNL 261 + L Sbjct: 179 EKYDEL 184 >gi|222148035|ref|YP_002548992.1| DNA polymerase [Agrobacterium vitis S4] gi|221735023|gb|ACM35986.1| DNA polymerase [Agrobacterium vitis S4] Length = 302 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 75/221 (33%), Positives = 107/221 (48%), Gaps = 1/221 (0%) Query: 39 SQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLS 98 T + + A A+ A SL ELK+ L F C+L +++ S Sbjct: 83 PALNRDRPAPRPAASTPLAIPDETAINDARFAAESARSLAELKAALEGFSSCNLKTSARS 142 Query: 99 TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158 TI A +M+IG PS D+ G FSG+TG +LD+ML +I + R + ++ PW Sbjct: 143 TIFAEGPAEAGIMVIGPIPSADDDREGLAFSGRTGALLDRMLAAIGLRRDALLLTTAIPW 202 Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218 PG+R + E ICRP I RQI L PK +L +GN T FFF A G+W + Sbjct: 203 RGPGDRMPTPAEAAICRPFIERQIALAEPKAVLLLGNFTARFFFGGTATIHS-MRGEWRD 261 Query: 219 LCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 + + +AT HPQEL+Q P K W L+ ++ L Sbjct: 262 VAAGGHGVAAMATFHPQELLQAPATKALAWRDLLAFRQRLA 302 >gi|254436695|ref|ZP_05050189.1| uracil-DNA glycosylase, family 4, putative [Octadecabacter antarcticus 307] gi|198252141|gb|EDY76455.1| uracil-DNA glycosylase, family 4, putative [Octadecabacter antarcticus 307] Length = 264 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 63/260 (24%), Positives = 120/260 (46%), Gaps = 12/260 (4%) Query: 12 ILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSI 70 + + + GV D+P + + + A + + + + + I Sbjct: 6 AKALLDWQVEMGVDEAIGDDPVDRYALQDVKPAPKAAQAPSTLPSAPPAVATAAPEINQI 65 Query: 71 AQKA------CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNIS 124 + L L++ + +F C L + + + + + T G +MII P D+ + Sbjct: 66 SAANNAANAAQDLAGLRAAMGAFEGCALKAAARNLVFSGGTAGAPVMIIADAPDRDDDRA 125 Query: 125 GKPFSGKTGNMLDKMLQSIEIMRT---QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ 181 G+ F+G+TG +LDKML +I + R+ I+ + + PW+PP NR+ + EM + P + R Sbjct: 126 GELFAGRTGALLDKMLAAIGLGRSGDAPIYAAPVLPWNPPQNRDPNADEMAMMLPFLQRH 185 Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241 I L +PK+L+ +GN N + G W+++ + +P + P L+ P Sbjct: 186 ITLAAPKVLILMGNGPCQALLNKSG--MTRLHGGWTDVQIGSASLPAIPMFAPSYLLTKP 243 Query: 242 LIKKNTWHALITLKKALKNL 261 K++ W L++LK LK+L Sbjct: 244 SAKRDAWSDLLSLKAHLKDL 263 >gi|91774769|ref|YP_544525.1| phage SPO1 DNA polymerase-related protein [Methylobacillus flagellatus KT] gi|91708756|gb|ABE48684.1| phage SPO1 DNA polymerase-related protein [Methylobacillus flagellatus KT] Length = 330 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 52/247 (21%), Positives = 90/247 (36%), Gaps = 16/247 (6%) Query: 26 WVFDEPNNEATYESQRKEKSIDSAIQPIT----------NIRHIHSPLVQQADSIAQKAC 75 V EP EA + + + Q A A Sbjct: 79 AVQAEPACEADSHEAGAIQPDPEYFEAMQTWPEFGESVVPPLIEEVSAPQGDRRTAIMAM 138 Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 L+ + C L T+ + + +G P ++ G+PF G G + Sbjct: 139 DWQALQQSVSECEACDLAQKRTQTVFGIGDPNAEWLFVGEAPGAEEDRWGEPFVGPAGQL 198 Query: 136 LDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 LD ML +I + R ++I+ + PP NR+ E+ C P + RQ+ELI PK+++ +G Sbjct: 199 LDNMLAAIALKRGENVYIANVLKCRPPANRDPQGEEVVKCDPYLKRQVELIKPKLIVALG 258 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 +D G + +P + T HP L++ K W L Sbjct: 259 KFAAQSLLASDKSIAG-LRGALHDF----HGVPVIVTYHPAYLLRNLADKAKAWDDLCFA 313 Query: 255 KKALKNL 261 ++ +++L Sbjct: 314 RETMQHL 320 >gi|78187754|ref|YP_375797.1| Phage SPO1 DNA polymerase-related protein [Chlorobium luteolum DSM 273] gi|78167656|gb|ABB24754.1| Phage SPO1 DNA polymerase-related protein [Chlorobium luteolum DSM 273] Length = 199 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 5/190 (2%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 A +L L+ C L T + + L++IG P ++ +GKPF G+ Sbjct: 5 PTAEALGALRLETLECRKCRLAETRNTVVFGEGDPESKLVVIGEGPGAEEDATGKPFVGR 64 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191 +G +L K+L +I R ++ I I PP NRN ++ E+ C P + QIE+I PK++L Sbjct: 65 SGQLLTKILAAIGFSREEVFICNIVKCRPPQNRNPAHDEIAACTPWLKSQIEIIRPKVIL 124 Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 +G N ++ GK + T HP L++ P K+ W + Sbjct: 125 LLGKVAANTILQ-NSLSMGAMRGKVLQWE----GVDCFVTYHPAALLRNPNWKRGCWEDV 179 Query: 252 ITLKKALKNL 261 L+ N+ Sbjct: 180 QLLRHHYDNI 189 >gi|282901222|ref|ZP_06309151.1| Phage SPO1 DNA polymerase-related protein [Cylindrospermopsis raciborskii CS-505] gi|281193922|gb|EFA68890.1| Phage SPO1 DNA polymerase-related protein [Cylindrospermopsis raciborskii CS-505] Length = 223 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 48/192 (25%), Positives = 79/192 (41%), Gaps = 11/192 (5%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 +++EL + H C L + +MIIG P ++ +G PF GK+G + Sbjct: 34 NVNELALQCENCHRCGLGKNRTHAVVGRGNPQAKIMIIGEAPGQHEDETGLPFVGKSGQL 93 Query: 136 LDKMLQSIE-IMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 LDK+L S+ ++I I PP NR ++ E+ CRP ++ QI LI PKI+L G Sbjct: 94 LDKILASVNLTTEQDVYICNIVKCRPPENRVPTSEEINACRPYLLEQIRLIDPKIILLTG 153 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWH 249 + + G+W + HP L++ P K W Sbjct: 154 ATAVKGVTGSKL-PITKIRGQWLEWE----GRLCMPIFHPSYLLRNPSKEQGSPKWLMWQ 208 Query: 250 ALITLKKALKNL 261 + ++ + Sbjct: 209 DIQQIRNRYDQI 220 >gi|226939479|ref|YP_002794552.1| DNA-directed DNA polymerase, bacteriophage-type [Laribacter hongkongensis HLHK9] gi|226714405|gb|ACO73543.1| Probable DNA-directed DNA polymerase, bacteriophage-type [Laribacter hongkongensis HLHK9] Length = 259 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 46/231 (19%), Positives = 79/231 (34%), Gaps = 10/231 (4%) Query: 26 WVFDEP----NNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELK 81 W +P A+ + + + L Sbjct: 16 WCLRQPESGLPARASEVMTLPQPEVLPPATGTEPAPAVVLAPPTAVMEQVTATDDWDNLS 75 Query: 82 SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 + C LC T T+ LM+IG P + +++ G+PF G G +LD ML Sbjct: 76 RQVSGCRSCRLCETRTRTVLERGNRQAPLMLIGEGPGEQEDLQGRPFVGPAGKLLDAMLT 135 Query: 142 SIEI-MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF 200 + +++ + PPGNRN EM C+ + QI L+ P++++ +G Sbjct: 136 ATGWSPEQDMYVCNVVKCRPPGNRNPQPDEMAACQAYLQTQIRLVRPRLIVALGRVAAQS 195 Query: 201 FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 + + G+ P + T HP L++ K W L Sbjct: 196 LLATELSV-ARLRGQTHQYA----GYPLVVTYHPAYLLRNLPDKARAWQDL 241 >gi|307266580|ref|ZP_07548111.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacter wiegelii Rt8.B1] gi|326391764|ref|ZP_08213285.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacter ethanolicus JW 200] gi|306918377|gb|EFN48620.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacter wiegelii Rt8.B1] gi|325992202|gb|EGD50673.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacter ethanolicus JW 200] Length = 186 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 44/185 (23%), Positives = 84/185 (45%), Gaps = 5/185 (2%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L EL C L T + + +M +G P +++ G+PF G+ G +L Sbjct: 6 LKELYLECLHCTKCDLSKTKTNMVFGEGNLRAKVMFVGEGPGRDEDLQGRPFVGRAGQLL 65 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 +KML+ + + R +++I+ + PP NR E++ C P + Q+ +I+PKI++ +G Sbjct: 66 NKMLEEVGLKREEVYIANVVKCRPPNNRVPLQSEIDACLPYLRNQVAIIAPKIIVCLGAT 125 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 + + + T G+W + +AT HP +++ P + +K+ Sbjct: 126 AAKAIIDKNFKITT-MRGQWFE----RKGVKIIATYHPAAILRDPEKLEPAMEDFKKIKE 180 Query: 257 ALKNL 261 L L Sbjct: 181 ELNKL 185 >gi|237746081|ref|ZP_04576561.1| DNA polymerase bacteriophage-type [Oxalobacter formigenes HOxBLS] gi|229377432|gb|EEO27523.1| DNA polymerase bacteriophage-type [Oxalobacter formigenes HOxBLS] Length = 317 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 52/225 (23%), Positives = 83/225 (36%), Gaps = 7/225 (3%) Query: 42 KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTIC 101 P ++ + A A S +L + CHLC T + Sbjct: 88 PPPPASGTGFPAFDVADAATASALSA-ETAAGPDSWEKLLGEIGHCERCHLCKTRNKVVP 146 Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHP 160 D + IG P ++ G+PF G++G +LD M+ ++ + R ++I+ I Sbjct: 147 GIGDREADWLFIGEGPGFHEDRQGEPFVGRSGKLLDAMMAAMRMKRGENVYIANIVKCRA 206 Query: 161 PG----NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN-DAQKTYQNLGK 215 +R + E IC P + RQI+LI PKI++ +G N + Sbjct: 207 SNESGKDRQPTEEEAAICMPYLERQIDLIRPKIMVALGKTAAVALLNTGRDVSLGSLRNR 266 Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 T IP + T HP L++ P KK W L Sbjct: 267 EHFFRTGGRKIPLVVTYHPSYLLRTPGGKKQAWQDLCRALDIYDE 311 >gi|296158932|ref|ZP_06841760.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp. Ch1-1] gi|295890807|gb|EFG70597.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp. Ch1-1] Length = 391 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 57/251 (22%), Positives = 91/251 (36%), Gaps = 24/251 (9%) Query: 25 YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSP------------------LVQQ 66 EP T R+ K + P Sbjct: 132 DAAQAEPGRAQTPAETRQPKQPQQPSRTPEPPAFDAPPEDDFAWFDDLPTHAPADAPDAA 191 Query: 67 ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126 + A L + + C LC ST+ G D M+IG P ++++ G+ Sbjct: 192 PPAPAIHTLDWDALSERVAACRLCRLCEKRRSTVFGVGDRGADWMLIGEAPGENEDRLGE 251 Query: 127 PFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELI 185 PF G+ G +LD ML+S+ + R +I+ + PPGNRN E+ C P + RQ+ L+ Sbjct: 252 PFVGQAGKLLDNMLRSLTLARDTNVYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVALV 311 Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK 245 PK+++ +G DA G+ +P + T HP L++ K Sbjct: 312 KPKLIVALGRFAAQSLLKTDA-SISSLRGRVHEYE----GVPVIVTYHPAYLLRSLPDKA 366 Query: 246 NTWHALITLKK 256 W L + Sbjct: 367 KAWADLCLARD 377 >gi|91784145|ref|YP_559351.1| Phage SPO1 DNA polymerase-related protein [Burkholderia xenovorans LB400] gi|91688099|gb|ABE31299.1| Phage SPO1 DNA polymerase-related protein [Burkholderia xenovorans LB400] Length = 401 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 52/243 (21%), Positives = 91/243 (37%), Gaps = 25/243 (10%) Query: 34 EATYESQRKEKSIDSAIQPITNIRHIHSPLVQQ-------------------ADSIAQKA 74 A ++ ++ +P + A Sbjct: 147 RAQTPAETRQPKQPQQPSRTPEPPAFDAPPEDDFAWFDDLPTHAPADAADAAPPATAIHT 206 Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L + + C LC +T+ G D M+IG P ++++ G+PF G+ G Sbjct: 207 LDWDALSERVAACRLCRLCEKRTNTVFGVGDRGADWMLIGEAPGENEDRLGEPFVGQAGK 266 Query: 135 MLDKMLQSIEIMRT-QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 +LD ML+S+ + R ++I+ + PPGNRN E+ C P + RQ+ L+ PK+++ + Sbjct: 267 LLDNMLRSLTLARDANVYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVALVKPKLIVAL 326 Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253 G DA G+ +P + T HP L++ K W L Sbjct: 327 GRFAAQSLLKTDA-SISSLRGRVHEYE----GVPVIVTYHPAYLLRSLPDKAKAWADLCL 381 Query: 254 LKK 256 + Sbjct: 382 ARD 384 >gi|217076510|ref|YP_002334226.1| uracil-DNA glycosylase [Thermosipho africanus TCF52B] gi|217036363|gb|ACJ74885.1| uracil-DNA glycosylase [Thermosipho africanus TCF52B] Length = 199 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 79/184 (42%), Gaps = 9/184 (4%) Query: 82 SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 +++ C L + + +M +G P + +++SG+PF G+ G +L K+L+ Sbjct: 12 ERIKNCKACPLHENRTNVVPGEGNLDSPIMFVGEGPGEDEDLSGRPFVGRAGQLLTKILE 71 Query: 142 SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 S+ I R ++I+ I PP NR + E IC + QIE+I+P++++ +G F Sbjct: 72 SVNIKREDVYITNIVKCRPPNNRTPTKEEASICSHYLFAQIEVINPRMIVTLGKPALELF 131 Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWHALITLKK 256 + + G I HP L++ P K TW + ++K Sbjct: 132 LG-KSVAITKVRGNEFEWK---GGIIIFPMFHPSYLLRNPSKAKGSPKDLTWQDIKRVRK 187 Query: 257 ALKN 260 Sbjct: 188 YYDQ 191 >gi|221198347|ref|ZP_03571393.1| uracil-DNA glycosylase, family 4 [Burkholderia multivorans CGD2M] gi|221208286|ref|ZP_03581290.1| uracil-DNA glycosylase, family 4 [Burkholderia multivorans CGD2] gi|221171934|gb|EEE04377.1| uracil-DNA glycosylase, family 4 [Burkholderia multivorans CGD2] gi|221182279|gb|EEE14680.1| uracil-DNA glycosylase, family 4 [Burkholderia multivorans CGD2M] Length = 358 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 49/205 (23%), Positives = 84/205 (40%), Gaps = 6/205 (2%) Query: 53 ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMI 112 + +A L + + C LC +T+ D M+ Sbjct: 143 AAPPGDSATAAEPRAAEAPVAMLDWDALAARVADCTRCRLCEKRTNTVFGVGDREADWML 202 Query: 113 IGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEM 171 IG P ++++ G+PF G+ G +LD ML+S+ + R ++I+ + PPGNRN E+ Sbjct: 203 IGEAPGENEDKQGEPFVGQAGKLLDNMLRSLSLQRGENVYIANVIKCRPPGNRNPEPDEV 262 Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231 C P + RQ+ L+ PK+++ +G DA G+ +P + T Sbjct: 263 ARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDASIAS-LRGRVHAYE----GVPVIVT 317 Query: 232 VHPQELIQYPLIKKNTWHALITLKK 256 HP L++ K W L + Sbjct: 318 YHPAYLLRSLPDKAKAWADLCLARD 342 >gi|167038549|ref|YP_001666127.1| phage SPO1 DNA polymerase-like protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256752669|ref|ZP_05493520.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacter ethanolicus CCSD1] gi|320116945|ref|YP_004187104.1| phage SPO1 DNA polymerase-like protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166857383|gb|ABY95791.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256748431|gb|EEU61484.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacter ethanolicus CCSD1] gi|319930036|gb|ADV80721.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 186 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 5/185 (2%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L EL C L T + + +M +G P +++ G+PF G+ G L Sbjct: 6 LKELYLECLHCTKCDLSKTKTNMVFGEGNLRAKVMFVGEGPGRDEDLQGRPFVGRAGQFL 65 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 +KML+ + + R +++I+ I PP NR E++ C P + Q+ +I+PK+++ +G Sbjct: 66 NKMLEDVGLKREEVYIANIVKCRPPNNRVPLQSEIDACLPYLRNQVAIIAPKMIVCLGAT 125 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 + K G+W + +AT HP +++ P + +K+ Sbjct: 126 AAKAIID-KNFKITVMRGQWFE----RKGVKIIATYHPAAILRDPEKLEPAMEDFKKIKE 180 Query: 257 ALKNL 261 L L Sbjct: 181 ELDKL 185 >gi|313201963|ref|YP_004040621.1| phage spo1 DNA polymerase-like protein [Methylovorus sp. MP688] gi|312441279|gb|ADQ85385.1| phage SPO1 DNA polymerase-related protein [Methylovorus sp. MP688] Length = 377 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 6/202 (2%) Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120 + + Q + L+S + + C L T T+ + +I+G P Sbjct: 166 ATSLGQGRRDSIAQLDWQGLQSCVANCQACSLSRTRTQTVFGVGDPAAEWLIVGEAPGAE 225 Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIM 179 ++ G+PF G+ G +LD ML +I++ R ++I+ + PP NR+ E++ C P + Sbjct: 226 EDKRGEPFVGQAGQLLDNMLGAIQLKRGQNVYIANVLKCRPPQNRDPQGEEVQQCDPFLK 285 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 RQ+ELI PK++L +G N+DA G+ +P + T HP L++ Sbjct: 286 RQVELIKPKLILALGKFAAQSLLNSDATIGS-MRGRQHEYN----GVPVIVTYHPAYLLR 340 Query: 240 YPLIKKNTWHALITLKKALKNL 261 + K W L + ++ L Sbjct: 341 NLMDKAKAWEDLCLARATMRKL 362 >gi|254415738|ref|ZP_05029496.1| uracil-DNA glycosylase, family 4 [Microcoleus chthonoplastes PCC 7420] gi|196177444|gb|EDX72450.1| uracil-DNA glycosylase, family 4 [Microcoleus chthonoplastes PCC 7420] Length = 237 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 46/219 (21%), Positives = 83/219 (37%), Gaps = 11/219 (5%) Query: 49 AIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQ 108 ++ + P + S+ L C L +T + Sbjct: 18 TSSTPSDFQPELIPTDAKVPIPPGTYDSMESLADHCNGCQRCELAATRTHAVVGRGNVHA 77 Query: 109 DLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM-RTQIHISMISPWHPPGNRNLS 167 +MIIG P +++ G PF G+ G +L+K+L ++++ ++I ++ PPGNR + Sbjct: 78 PIMIIGEAPGQNEDEQGLPFVGRAGQLLEKILAAVKLDSERDVYICNMNKCRPPGNRVPT 137 Query: 168 NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227 E+ C+P ++ QI L+ PKI+L G + G W Sbjct: 138 PDEVAACKPYLLEQIRLVDPKIILLTGATAVKGLTGEKR-GITKIRGTWMEWE----GRL 192 Query: 228 TLATVHPQELIQYPLI-----KKNTWHALITLKKALKNL 261 + HP L++ P K W + ++ L L Sbjct: 193 CMPIFHPAYLLRNPSREQGKPKWFMWQDIQAVRAKLNEL 231 >gi|167040413|ref|YP_001663398.1| phage SPO1 DNA polymerase-like protein [Thermoanaerobacter sp. X514] gi|300913700|ref|ZP_07131017.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacter sp. X561] gi|307723285|ref|YP_003903036.1| phage SPO1 DNA polymerase-like protein [Thermoanaerobacter sp. X513] gi|166854653|gb|ABY93062.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacter sp. X514] gi|300890385|gb|EFK85530.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacter sp. X561] gi|307580346|gb|ADN53745.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacter sp. X513] Length = 186 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 5/185 (2%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L EL C L T + +M +G P +++ G+PF G+ G +L Sbjct: 6 LKELYLACLYCTKCDLHKTKTHMVFGEGNLRAKVMFVGEGPGKDEDLQGRPFVGRAGQLL 65 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 +KML+ + + R +++I+ + PP NR E++ C P + Q+ +I+PKI++ +G Sbjct: 66 NKMLEDVGLKREEVYIANVVKCRPPNNRVPLQSEVDACLPYLRNQVAIIAPKIIVCLGAT 125 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 + K G+W + +AT HP +++ P + +K+ Sbjct: 126 AAKAIID-KNFKITAMRGQWFE----RKGVKIIATYHPAAILRDPEKLEPAMEDFKKIKE 180 Query: 257 ALKNL 261 L L Sbjct: 181 ELDKL 185 >gi|110597629|ref|ZP_01385914.1| phage SPO1 DNA polymerase-related protein [Chlorobium ferrooxidans DSM 13031] gi|110340749|gb|EAT59226.1| phage SPO1 DNA polymerase-related protein [Chlorobium ferrooxidans DSM 13031] Length = 218 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 5/203 (2%) Query: 58 HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117 + S A A L EL+ + C L T + + + ++++IG P Sbjct: 8 PVVSTPSGSEHPSASAAEQLAELQKAAMACRKCRLAETRRNVVVGEGSPLAEIVVIGEAP 67 Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177 ++ SG+PF G++G +L K+LQ++ R +++I I PPGNRN E+ CRP Sbjct: 68 GAEEDASGRPFVGRSGQLLTKILQAVHFEREKVYICNILKCRPPGNRNPLEDEIGFCRPW 127 Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237 + +Q++++ PKI+L +G N + GK T HP L Sbjct: 128 LQQQLQILKPKIILILGKVAANTIL-ENKLSMGMMRGKLIEW----KGFDCFVTYHPAAL 182 Query: 238 IQYPLIKKNTWHALITLKKALKN 260 ++ P K+ W + ++ K Sbjct: 183 LRNPNWKRACWEDVQMMEHHYKK 205 >gi|317052571|ref|YP_004113687.1| phage SPO1 DNA polymerase-like protein [Desulfurispirillum indicum S5] gi|316947655|gb|ADU67131.1| phage SPO1 DNA polymerase-related protein [Desulfurispirillum indicum S5] Length = 279 Score = 176 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 51/227 (22%), Positives = 95/227 (41%), Gaps = 3/227 (1%) Query: 34 EATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHL- 92 + + + S Q T P ++ S L+ L+ C L Sbjct: 33 RSLSDPGPRSASRPPVFQQTTRPAAEPPPRQTTTPAVIPSQDSWQRLEEDLKDCQACALA 92 Query: 93 CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHI 152 + + D+M+IG P ++ G+PF GK+G LD+++ ++ R +++I Sbjct: 93 RQGRKTIVMGEGNRQADIMLIGEGPGFDEDRLGRPFVGKSGQKLDQIMLAVGFQREELYI 152 Query: 153 SMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN 212 + + PPGNRN E+ IC+ + RQI L++P+ +L +G NF + + Sbjct: 153 ANVVKCRPPGNRNPEPGEISICQQFLQRQIRLVNPRFILALGKFAANFLYGESGAP--RT 210 Query: 213 LGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 LG + I + T HP L++ +++ W + L+ Sbjct: 211 LGSMREKILHYGDIQVVVTYHPSALLRNENLRRPVWDDVRVLRNLYD 257 >gi|288931880|ref|YP_003435940.1| phage SPO1 DNA polymerase-related protein [Ferroglobus placidus DSM 10642] gi|288894128|gb|ADC65665.1| phage SPO1 DNA polymerase-related protein [Ferroglobus placidus DSM 10642] Length = 198 Score = 176 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 79/187 (42%), Gaps = 3/187 (1%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 +L E+ ++ C L T + + E ++ +G P +++ G+PF G G Sbjct: 2 TLEEIHEEIKKCRKCELYKTKTNYVPGEGNEKAKIVFVGEAPGREEDLQGRPFVGAAGQY 61 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 L K L+ I R+++ I+ I PP NR+ E+E C P +++Q+ I P +++ +G Sbjct: 62 LTKTLEKCGIKRSEVFITNILKCRPPNNRDPKPEEVEKCFPYLVKQLHEIKPDVIVCLGR 121 Query: 196 KTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 + + + GK + + T HP ++ P +K+ + Sbjct: 122 HSAREILNFFGKKFKGISADRGKIFEAELDGKKVKIIPTYHPAAVLYKPQLKEYFEEDIR 181 Query: 253 TLKKALK 259 + K Sbjct: 182 KVASFFK 188 >gi|260654952|ref|ZP_05860440.1| uracil-DNA glycosylase [Jonquetella anthropi E3_33 E1] gi|260630267|gb|EEX48461.1| uracil-DNA glycosylase [Jonquetella anthropi E3_33 E1] Length = 208 Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 10/190 (5%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L +L + C LC T ST+ + LMI+G P ++ G+PF G+ G +L Sbjct: 20 LRQLNQEVGGCSRCGLCETRHSTVPGEGSGENGLMIVGEGPGADEDEQGRPFVGRAGQLL 79 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++LQ+ I R++ I+ + PP NR E+ C+ + Q+ L+ PK+++ +GN Sbjct: 80 SQILQAAGIDRSRSWITNVVKCRPPKNRTPQIEEVLACQDWLEAQLILLQPKVIVSMGNT 139 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWHAL 251 +F + + + G+W + + + HP L++ K TW + Sbjct: 140 PTKWFL-HSSMGITKLRGQWFSW----RGVDLMPMFHPSYLLREDSRSVGSPKYLTWQDI 194 Query: 252 ITLKKALKNL 261 +KK L + Sbjct: 195 QNVKKRLDEV 204 >gi|291541525|emb|CBL14635.1| uracil-DNA glycosylase, family 4 [Ruminococcus bromii L2-63] Length = 191 Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 49/188 (26%), Positives = 95/188 (50%), Gaps = 6/188 (3%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 + ELKS + H C LC T + + E ++M IG P +++++ G+PF G+ G Sbjct: 3 NTWEELKSACENCHRCELCETRTNVVVGVGNENAEVMFIGEGPGENEDLQGEPFVGRAGK 62 Query: 135 MLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 +LDKML ++++ R + +I+ + PP NR+ E E+C + Q+ +I PKI++ + Sbjct: 63 LLDKMLAAVDLDRNKNIYIANMVKCRPPKNRDPKPEEQEMCIEWLRTQVRMIKPKIIVCL 122 Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253 G +D K + G+W + + +A +HP +++ P K + + + Sbjct: 123 GRIAAARLIKSD-IKITKEHGQWIE----KNGVLMMAMLHPAAILRDPRRKPDAFDDFLK 177 Query: 254 LKKALKNL 261 L+ + + Sbjct: 178 LRDKINEV 185 >gi|125975586|ref|YP_001039496.1| phage SPO1 DNA polymerase-related protein [Clostridium thermocellum ATCC 27405] gi|256005909|ref|ZP_05430854.1| phage SPO1 DNA polymerase-related protein [Clostridium thermocellum DSM 2360] gi|281416598|ref|ZP_06247618.1| phage SPO1 DNA polymerase-related protein [Clostridium thermocellum JW20] gi|125715811|gb|ABN54303.1| phage SPO1 DNA polymerase-related protein [Clostridium thermocellum ATCC 27405] gi|255990113|gb|EEU00250.1| phage SPO1 DNA polymerase-related protein [Clostridium thermocellum DSM 2360] gi|281408000|gb|EFB38258.1| phage SPO1 DNA polymerase-related protein [Clostridium thermocellum JW20] gi|316939705|gb|ADU73739.1| phage SPO1 DNA polymerase-related protein [Clostridium thermocellum DSM 1313] Length = 189 Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 5/186 (2%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 S EL + + C L T + + +M++G P + +++ G PF G G + Sbjct: 3 SWEELIKVCSNCTKCGLSKTRTNIVIGRGNINAPMMLVGEGPGEQEDLQGLPFVGPAGKL 62 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 LD +L+++ I +I+ I PPGNR ++ E E+C P + Q+ L+ P+I++ +G Sbjct: 63 LDLLLKAMRIKEDMYYIANIVKCRPPGNRVPTDDEAEMCLPYLRNQLVLVKPRIIVCLGA 122 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 + + +A K G+W +AT HP L++ K W +K Sbjct: 123 TAMKYIIDRNA-KITNVRGQWIE----RKGYWIIATFHPAALLRDESKKVLMWEDFKKVK 177 Query: 256 KALKNL 261 + L ++ Sbjct: 178 QRLDSI 183 >gi|289208938|ref|YP_003461004.1| phage SPO1 DNA polymerase-related protein [Thioalkalivibrio sp. K90mix] gi|288944569|gb|ADC72268.1| phage SPO1 DNA polymerase-related protein [Thioalkalivibrio sp. K90mix] Length = 264 Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 53/217 (24%), Positives = 88/217 (40%), Gaps = 10/217 (4%) Query: 47 DSAIQPITNIRHIHSPLVQQADSIAQ---KACSLHELKSLLRSFHDC-HLCSTSLSTICA 102 + Q PLV AD + EL++ +R C L + T+ Sbjct: 47 AESAQAPGAPSETSEPLVSPADVPEEGGVAVLDWPELEARVRECTACAELAAQRTQTVFG 106 Query: 103 TQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPP 161 + +G P ++ G+PF G+ G +LD ML ++ + R + I+ + PP Sbjct: 107 VGDRRARWLFVGEAPGAEEDRRGEPFVGRAGQLLDSMLAALGLDRGQDVFIANVLKCRPP 166 Query: 162 GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221 NR+ S E CR + RQI L+ P++++ +G D Q LG+ Sbjct: 167 NNRDPSPDESRACRGFLDRQIALVQPEVIVALGRIAAQHLLETD-----QPLGRMRGSLH 221 Query: 222 PHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 + +P + T HP L++ P K W L + L Sbjct: 222 RYREVPLVVTYHPAYLLRKPQDKAKAWQDLQRARACL 258 >gi|119486055|ref|ZP_01620117.1| Phage SPO1 DNA polymerase-related protein [Lyngbya sp. PCC 8106] gi|119456830|gb|EAW37958.1| Phage SPO1 DNA polymerase-related protein [Lyngbya sp. PCC 8106] Length = 243 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 49/218 (22%), Positives = 86/218 (39%), Gaps = 11/218 (5%) Query: 49 AIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQ 108 A ++ P Q + +L E+ H C L + + Sbjct: 17 ATPTPSHFNRDQIPQDVQVQIPPETYQNLDEIADHCNQCHRCVLGNNRTHAVIGRGNLQA 76 Query: 109 DLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIE-IMRTQIHISMISPWHPPGNRNLS 167 +MIIG P +++ G PF G++G +LDK+L+S+ +++IS PP NR + Sbjct: 77 AIMIIGEAPGKNEDEQGLPFVGRSGQLLDKILESVGLSTEREVYISNAIRCRPPENRTPT 136 Query: 168 NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227 E+E C+P ++ QI L+ P+I+L G Q + G+W Sbjct: 137 AAEIEACKPYLLEQIRLVDPQIILLTGATAVKSLLAEK-QGITKIRGEWRQWE----GRL 191 Query: 228 TLATVHPQELIQYPLI-----KKNTWHALITLKKALKN 260 + HP L++ P + K W + ++ Sbjct: 192 CMPIFHPAYLLRNPSLEPGKPKWLMWEDIKKVRNKYDE 229 >gi|56479144|ref|YP_160733.1| DNA polymerase-related protein,bacteriophage-type [Aromatoleum aromaticum EbN1] gi|56315187|emb|CAI09832.1| DNA polymerase-related protein,bacteriophage-type [Aromatoleum aromaticum EbN1] Length = 273 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 50/224 (22%), Positives = 89/224 (39%), Gaps = 9/224 (4%) Query: 37 YESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTS 96 + ++ + S P+ + SP + + L + +R+ C LC Sbjct: 53 FSAREPQASHRPHPDPVAAAPAVDSPDERARRI---ETLDWEALDADIRACTACRLCERR 109 Query: 97 LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQ-IHISMI 155 + M +G P ++ G+PF G G +LD ML +I + R + ++I+ Sbjct: 110 RQAVPGVGDRQASWMFVGEGPGAEEDQRGEPFVGAAGKLLDAMLAAIGLKRGEGVYIANA 169 Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK 215 PP NR N E+E C P + RQI L+ P++L+ +G D G+ Sbjct: 170 VKCRPPHNRTPGNDEIEACAPYLARQIALLQPRLLVALGRPAARALLGVD-VAIGAARGQ 228 Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 +P + T HP L++ K W L ++ ++ Sbjct: 229 VF----RCRGMPVVVTYHPAYLLRNQRDKAKVWEDLCFARELME 268 >gi|221215432|ref|ZP_03588396.1| uracil-DNA glycosylase, family 4 [Burkholderia multivorans CGD1] gi|221164616|gb|EED97098.1| uracil-DNA glycosylase, family 4 [Burkholderia multivorans CGD1] Length = 358 Score = 175 bits (443), Expect = 5e-42, Method: Composition-based stats. Identities = 51/218 (23%), Positives = 86/218 (39%), Gaps = 6/218 (2%) Query: 40 QRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLST 99 D A + +A L + + C LC +T Sbjct: 130 MPPAADDDFAWFDAAPPGDSATAAEPRAAEAPVAMLDWDALAARVADCTRCRLCEKRTNT 189 Query: 100 ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPW 158 + D M+IG P ++++ G+PF G+ G +LD ML+S+ + R ++I+ + Sbjct: 190 VFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLLDNMLRSLSLQRGENVYIANVIKC 249 Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218 PPGNRN E+ C P + RQ+ L+ PK+++ +G DA G+ Sbjct: 250 RPPGNRNPEPDEVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDASIAS-LRGRVHA 308 Query: 219 LCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 +P + T HP L++ K W L + Sbjct: 309 YE----GVPVIVTYHPAYLLRSLPDKAKAWADLCLARD 342 >gi|297616747|ref|YP_003701906.1| phage SPO1 DNA polymerase-related protein [Syntrophothermus lipocalidus DSM 12680] gi|297144584|gb|ADI01341.1| phage SPO1 DNA polymerase-related protein [Syntrophothermus lipocalidus DSM 12680] Length = 228 Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 5/187 (2%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 SL EL + + C L S + + DLM++G P ++ G+PF G G Sbjct: 41 SSLEELAARAGACSRCRLRSGCRQVVFGEGDQKADLMLVGEGPGQVEDEQGRPFVGPAGQ 100 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 +LD++L++ I R +++I+ I PPGNR + E+ CR + QI L+SP+I++ +G Sbjct: 101 LLDRILEACAIRRDEVYITNIVKCRPPGNRLPNPDEVAACRGWLEAQIRLMSPRIIVCLG 160 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 A G+W + +A HP L++ P +K+ W + Sbjct: 161 LLATRTVIEAKA-TMAGIHGQWF----KRGDVWMMAVYHPAALLRDPRLKRPAWEDFKLI 215 Query: 255 KKALKNL 261 + + L Sbjct: 216 RDKYQQL 222 >gi|15922569|ref|NP_378238.1| DNA-directed DNA polymerase [Sulfolobus tokodaii str. 7] gi|15623359|dbj|BAB67347.1| 220aa long hypothetical DNA-directed DNA polymerase, bacteriophage-type [Sulfolobus tokodaii str. 7] Length = 220 Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats. Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 4/186 (2%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 SL ++K + S C L + + ++M +G P ++++ G+PF G G Sbjct: 2 DSLEKIKEEVISCKKCKLWQFRTNAVPGEGYPKAEIMFVGEAPGENEDKEGRPFVGAAGK 61 Query: 135 MLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 +L +M+ + + + R Q+ I+ + PP NR+ E+ C P + RQI++I PKI++ + Sbjct: 62 LLTQMIKEILGLERDQVFITNVVKCRPPNNRDPEEDEITACSPYLDRQIDIIMPKIIVTL 121 Query: 194 GNKTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 G + + F + + GK I T HP + P ++K Sbjct: 122 GRHSTKYIFSKMGENFSSITKVRGKSYVWKYKEKEIIVFPTYHPAAALYNPNLRKILEED 181 Query: 251 LITLKK 256 +++ Sbjct: 182 FKKIRE 187 >gi|297170986|gb|ADI22001.1| uracil-DNA glycosylase [uncultured myxobacterium HF0200_01L06] Length = 257 Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 101/263 (38%), Gaps = 16/263 (6%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEAT---YESQRKEKSIDSAIQPITNIR 57 M + +L A + + +E + + K ++ + + Sbjct: 1 MDPVQAGELRSLLASARSWLE----ECLEEGLDRIERPLPTAPAPRKPVEEEPA-LASPT 55 Query: 58 HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117 S + + Q L ++++ L C L + D++ +G P Sbjct: 56 AAQSTALPTPGPLTQTRPDLAQVRATLGECTRCALSEKRTQIVFGDGNPDADILFVGEGP 115 Query: 118 SDSDNISGKPFSGKTGNMLDKMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP 176 + +++ G PF G+ G +L +M++ + + R ++I I PPGNRN E+ CRP Sbjct: 116 GEQEDLRGLPFVGRAGELLTQMIEKGMGLARQDVYICNIVKCRPPGNRNPLPTEVNACRP 175 Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236 + QI+ ++P++++ +G + D + G W I + T+HP Sbjct: 176 FLDGQIDAVAPRVIVSLGKPAASLLLGRD-VAITRVRGTWHEY----RGIALMPTLHPAY 230 Query: 237 LIQY--PLIKKNTWHALITLKKA 257 L++ ++ W L + Sbjct: 231 LLRQYTAENRRWVWEDLKSALAR 253 >gi|38493049|pdb|1UI1|A Chain A, Crystal Structure Of Uracil-Dna Glycosylase From Thermus Thermophilus Hb8 Length = 205 Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats. Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 11/192 (5%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 +L L++ ++ C L + L I+G P + ++ +G+PF GK G + Sbjct: 2 TLELLQAQAQNCTACRLXEGRTRVVFGEGNPDAKLXIVGEGPGEEEDKTGRPFVGKAGQL 61 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC-RPIIMRQIELISPKILLFIG 194 L+++L++ I R +++I+ I PP NR E +IC +++QIELI+P+I++ +G Sbjct: 62 LNRILEAAGIPREEVYITNIVKCRPPQNRAPLPDEAKICTDKWLLKQIELIAPQIIVPLG 121 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWH 249 FF + GKW I HP L++ P K TW Sbjct: 122 AVAAEFFLGEK-VSITKVRGKWYEW----HGIKVFPXFHPAYLLRNPSRAPGSPKHLTWL 176 Query: 250 ALITLKKALKNL 261 + +K+AL L Sbjct: 177 DIQEVKRALDAL 188 >gi|218442796|ref|YP_002381116.1| phage SPO1 DNA polymerase-related protein [Cyanothece sp. PCC 7424] gi|218175154|gb|ACK73886.1| phage SPO1 DNA polymerase-related protein [Cyanothece sp. PCC 7424] Length = 209 Score = 174 bits (442), Expect = 7e-42, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 92/196 (46%), Gaps = 10/196 (5%) Query: 71 AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130 + L LK C L + + T D+M+IG P +++ +GKPF+G Sbjct: 13 SNSTSPLKTLKKTCARCTQCGLHKNRTKVVFGSGTLEADIMLIGEAPGQTEDKTGKPFTG 72 Query: 131 KTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 K G +LDKML SI + R QI+++ I PP NR + E+E CRP ++ QIE I+PK + Sbjct: 73 KAGKLLDKMLASINLERGQIYLTNIIKCRPPNNRTPTEKEIETCRPYLLAQIEFINPKFI 132 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KK 245 + G + Q GKW ++ HP L++ P + K Sbjct: 133 VLAGGSAYRGLTG-KRKPISQVRGKWFKWHNS----KCISIFHPAYLLRNPSLEKGSPKW 187 Query: 246 NTWHALITLKKALKNL 261 TW LI+LK+ L L Sbjct: 188 LTWQDLISLKRKLNKL 203 >gi|312135590|ref|YP_004002928.1| phage SPO1 DNA polymerase-like protein [Caldicellulosiruptor owensensis OL] gi|311775641|gb|ADQ05128.1| phage SPO1 DNA polymerase-related protein [Caldicellulosiruptor owensensis OL] Length = 185 Score = 174 bits (442), Expect = 7e-42, Method: Composition-based stats. Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 6/187 (3%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 + EL++ S C + + + + L+ +G P + ++ GKPF G+ G Sbjct: 3 TWEELENACISCEKCPISKNRTNVVVGDGNKNAKLVFVGEAPGEEEDKQGKPFVGRAGKF 62 Query: 136 LDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 LD L S+E+ R +I I PP NR + E + C P + QI+LISPKI++ +G Sbjct: 63 LDLALTSLELSREKDFYICNILKCRPPNNRVPTEAEAQNCLPFLRAQIKLISPKIIVCLG 122 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 + D K Q+ GKW +AT HP L++ P +++ + L ++ Sbjct: 123 ATAMKYILGKDL-KITQDRGKWFE----KGGFWIMATYHPAALLRDPGKREDFYRDLKSV 177 Query: 255 KKALKNL 261 K+ L+ L Sbjct: 178 KQKLEKL 184 >gi|145220372|ref|YP_001131081.1| phage SPO1 DNA polymerase-related protein [Prosthecochloris vibrioformis DSM 265] gi|145206536|gb|ABP37579.1| phage SPO1 DNA polymerase-related protein [Chlorobium phaeovibrioides DSM 265] Length = 191 Score = 174 bits (442), Expect = 7e-42, Method: Composition-based stats. Identities = 52/188 (27%), Positives = 83/188 (44%), Gaps = 5/188 (2%) Query: 74 ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 + SL L C L T S + LM+IG P ++ SG+PF G++G Sbjct: 3 SSSLEALAKEADKCRKCRLADTRHSVVFGEGNPEAGLMVIGEAPGADEDASGRPFIGRSG 62 Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 +L K+LQ++E R ++ I+ I PP NRN E+ C P + +Q+E+I PK++L + Sbjct: 63 QLLTKILQAVEFSRDEVFIANIVKCRPPENRNPLQDEIACCTPWLEKQLEIIRPKVILLL 122 Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253 G N + GK T HP L++ P K+ + Sbjct: 123 GKVAANTIL-VNQTALGTMRGKVLEW----KGTDCFVTYHPAALLRNPNWKRGCREDVQL 177 Query: 254 LKKALKNL 261 +++ NL Sbjct: 178 MRRHYDNL 185 >gi|320102815|ref|YP_004178406.1| phage SPO1 DNA polymerase-like protein [Isosphaera pallida ATCC 43644] gi|319750097|gb|ADV61857.1| phage SPO1 DNA polymerase-related protein [Isosphaera pallida ATCC 43644] Length = 334 Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats. Identities = 53/239 (22%), Positives = 92/239 (38%), Gaps = 13/239 (5%) Query: 26 WVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLR 85 V P +A + R +S +++ I Q++ +L L + Sbjct: 95 TVAASPVLKAPERTNRPTRSSPTSV--IATALFEEDGFATPPLPSDQRSNALTVLAEEVS 152 Query: 86 SFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML-DKMLQSI 143 S C L ++ T+ + LM IG P + ++ G PF G+ G +L D +++ + Sbjct: 153 SCQACPALVASRTQTVFGVGSPTARLMFIGEAPGEEEDAKGVPFVGRAGQLLTDMIVKGM 212 Query: 144 EIMRTQIHISMISPWHPPG----NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199 + R Q++I+ P NR E+ C + RQIE++ P+ L +G Sbjct: 213 GLTRDQVYIANACKCRPTDAEGRNRTPDPSEIRNCASYLDRQIEIVRPEFLCLLGKTAAQ 272 Query: 200 FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 Q + H + + T HP L++ P KK W L L A+ Sbjct: 273 AVLG-TPLPLAQLRKRLH----RHRGMTVVVTFHPAYLLRNPSDKKEAWEDLKMLMSAM 326 >gi|302338167|ref|YP_003803373.1| phage SPO1 DNA polymerase-related protein [Spirochaeta smaragdinae DSM 11293] gi|301635352|gb|ADK80779.1| phage SPO1 DNA polymerase-related protein [Spirochaeta smaragdinae DSM 11293] Length = 240 Score = 174 bits (442), Expect = 9e-42, Method: Composition-based stats. Identities = 52/221 (23%), Positives = 88/221 (39%), Gaps = 6/221 (2%) Query: 42 KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTIC 101 +++ S L A L E+ + S C L + Sbjct: 24 RKRRHPSLRDAGFTGLKASPALRSVPARDTDPALLLKEIAQEVSSCTACRLHEGRHHAVP 83 Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHP 160 ++IIG P ++ SG+PF G G LDK +++I + R++ I + P Sbjct: 84 GEGVVHPMVLIIGEGPGAQEDASGRPFVGPAGQYLDKWMKAIGLSRSEHLFIGNVIKCRP 143 Query: 161 PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220 PGNR+ E CRP + RQI+++ PK +L +G + +G+ Sbjct: 144 PGNRDPLPDEAAACRPFLDRQIDILRPKAILTVGRIAMQLLLDT-----TDGIGRRHGKR 198 Query: 221 TPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + IP + T HP +++ P + W L L+ L+ L Sbjct: 199 FEYRGIPLVPTYHPSGVLRNPEYRAPVWKDLKALRSLLEEL 239 >gi|37521977|ref|NP_925354.1| DNA polymerase related protein [Gloeobacter violaceus PCC 7421] gi|35212976|dbj|BAC90349.1| glr2408 [Gloeobacter violaceus PCC 7421] Length = 229 Score = 174 bits (442), Expect = 9e-42, Method: Composition-based stats. Identities = 47/217 (21%), Positives = 86/217 (39%), Gaps = 11/217 (5%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 ++ P + ++++ + C L T + L Sbjct: 14 AAPPQVQFDRIPNDAGVTIVPGTYSDFEQIRTHCNACFRCELGKTRTHAVVGRGNPQALL 73 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM-RTQIHISMISPWHPPGNRNLSNI 169 M+IG P ++++++G PF GK G +LDK+L++++ ++++ I PPGNR + Sbjct: 74 MVIGEGPGENEDLTGIPFVGKAGQLLDKILEAVQFDTEKDVYVANIVKCRPPGNRKPAPE 133 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 EM+ C + QI +I PKILL G D + + G+W + Sbjct: 134 EMKACLGYLNEQIRMIDPKILLLAGGTAVEGLTG-DKRGITKLRGQWLQWQGRW----VM 188 Query: 230 ATVHPQELIQYPLI-----KKNTWHALITLKKALKNL 261 HP L++ P K W + ++ L Sbjct: 189 PFFHPAFLLRNPSRDAGSPKWLAWQDIQQVRAKYDEL 225 >gi|325107250|ref|YP_004268318.1| phage SPO1 DNA polymerase-related protein [Planctomyces brasiliensis DSM 5305] gi|324967518|gb|ADY58296.1| phage SPO1 DNA polymerase-related protein [Planctomyces brasiliensis DSM 5305] Length = 329 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 6/183 (3%) Query: 77 LHELKSLLRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 L L + C L T T+ ++M IG P ++ G+PF G+ G + Sbjct: 141 LASLAERVAGCKRCPELARTRTQTVFGVGNPMAEVMFIGEAPGADEDKQGEPFVGRAGKL 200 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 L++++++ R +++I I PPGNRN + IE CR + QIE ++P+ ++ G Sbjct: 201 LNRIIEACGWEREELYICNILRCRPPGNRNPTPIEASHCREYLDGQIETVNPRFIVCWGT 260 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 + + GK L T HP L++ P + L L Sbjct: 261 VAAQNLLGVNT-PIGRMRGKLYEY----GRSQVLCTYHPSYLLRNPSARSLVRDDLQILL 315 Query: 256 KAL 258 K + Sbjct: 316 KEM 318 >gi|307299315|ref|ZP_07579116.1| phage SPO1 DNA polymerase-related protein [Thermotogales bacterium mesG1.Ag.4.2] gi|306915111|gb|EFN45497.1| phage SPO1 DNA polymerase-related protein [Thermotogales bacterium mesG1.Ag.4.2] Length = 205 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 8/190 (4%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L EL S + C L S+ +T+ + ++ +G P ++ SG+PF G+ G +L Sbjct: 11 LLELNSKISDCSLCPLSSSRTNTVPGEGSIETPVVFVGEGPGADEDASGRPFVGRAGELL 70 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 K+L+S+++ R I I+ I PP NR + E + C P ++ Q+ +I PK+++ +G Sbjct: 71 TKILESVKLSREDIFITNIVKCRPPKNRVPTAEEQKACSPYMLSQLAIIRPKLIVALGAT 130 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWHAL 251 ++F N + + + G+ + I A HP L++ K TW + Sbjct: 131 ALSYFVNEEGIQITKVRGRIFDWI---GGIKVFAMFHPSYLLRNASRAPGSPKSLTWEDI 187 Query: 252 ITLKKALKNL 261 ++K L Sbjct: 188 QNVRKMYDQL 197 >gi|220905704|ref|YP_002481015.1| phage SPO1 DNA polymerase-like protein [Cyanothece sp. PCC 7425] gi|219862315|gb|ACL42654.1| phage SPO1 DNA polymerase-related protein [Cyanothece sp. PCC 7425] Length = 238 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 56/223 (25%), Positives = 92/223 (41%), Gaps = 11/223 (4%) Query: 45 SIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQ 104 + A T + P Q A SL E+ H C L + + Sbjct: 14 PLPEAEIVSTPVDKEQIPSSAQVPIPAGTYTSLEEMAPHCDRCHRCDLGQSRTHAVVGRG 73 Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM-RTQIHISMISPWHPPGN 163 +MIIG P +++ +G PF GK G +L+K+L ++++ + ++I I PPGN Sbjct: 74 HPQAPIMIIGEGPGQTEDETGLPFVGKAGQLLEKILAAVQLDSQQDVYICNIVKCRPPGN 133 Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH 223 R + EM CRP ++ Q+ L+ PKI+L G D + + G+W Sbjct: 134 RVPTPEEMAACRPYLLEQLRLVDPKIILLTGATAVKGLTG-DKRGITKIRGQWLEWE--- 189 Query: 224 SIIPTLATVHPQELIQYPLI-----KKNTWHALITLKKALKNL 261 + +HP L++ P K W + T++ L L Sbjct: 190 -GRLCMPILHPAYLLRNPSKEPGSPKWLMWQDIQTVRAKLDEL 231 >gi|284052961|ref|ZP_06383171.1| phage SPO1 DNA polymerase-related protein [Arthrospira platensis str. Paraca] gi|291571857|dbj|BAI94129.1| uracil-DNA glycosylase [Arthrospira platensis NIES-39] Length = 238 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 81/206 (39%), Gaps = 11/206 (5%) Query: 62 PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121 P + +L ++ C L + +MIIG P + Sbjct: 35 PQNAKTPIPPGTYQTLAQIADHCNRCSRCELGKNRTHAVIGRGNPTAPIMIIGEAPGQHE 94 Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRT-QIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180 + G PF G++G +LD +L S+ + +++IS PP NR + E++ C+P ++ Sbjct: 95 DEQGLPFVGRSGKLLDNILDSVGLSTDTEVYISNAIRCRPPENRTPTASELQACKPYLLE 154 Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 QI LI+P+I+L G D + + G+W + HP L++ Sbjct: 155 QIRLINPQIILLTGATAVKSILG-DKRPITKIRGQWFQWE----GRQCMPIFHPAYLLRN 209 Query: 241 PLI-----KKNTWHALITLKKALKNL 261 K W + +++ L + Sbjct: 210 SSRDVGKPKWLMWQDMQVVRQRLNEI 235 >gi|319941916|ref|ZP_08016237.1| hypothetical protein HMPREF9464_01456 [Sutterella wadsworthensis 3_1_45B] gi|319804569|gb|EFW01439.1| hypothetical protein HMPREF9464_01456 [Sutterella wadsworthensis 3_1_45B] Length = 316 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 55/231 (23%), Positives = 98/231 (42%), Gaps = 7/231 (3%) Query: 37 YESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQK--ACSLHELKSLLRSFHDCHLCS 94 ++ + ++ ++ T + + P V + + K + L++L + C L + Sbjct: 73 PQAPQSARAAQTSAASPTVPQAVAQPAVGMSTELLSKIASADWQALQTLSQHCTACALSA 132 Query: 95 -TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIE-IMRTQIHI 152 + + G L+++G P +++ G PF GK+G +L ML S+ + R I Sbjct: 133 MGRQHVVFSDGGPGPKLVVVGEAPGAEEDLQGIPFVGKSGKLLTAMLDSLGLVRRRDCVI 192 Query: 153 SMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN--DAQKTY 210 + PP NRN E+ C + RQ+ELI P +L G + + Sbjct: 193 LNVLKCRPPRNRNPQPEEIVCCGHWLARQLELIKPDVLFLAGRFAISSLLKPADEMFSIS 252 Query: 211 QNLGKWSNLCTP-HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 + G+ P +P +AT HP L++ P K W L+ LK A+K Sbjct: 253 KMRGRIHLAQLPDGRQVPAVATYHPSYLLRSPAAKSKAWEDLLLLKAAMKQ 303 >gi|320106538|ref|YP_004182128.1| phage SPO1 DNA polymerase-like protein [Terriglobus saanensis SP1PR4] gi|319925059|gb|ADV82134.1| phage SPO1 DNA polymerase-related protein [Terriglobus saanensis SP1PR4] Length = 319 Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 7/209 (3%) Query: 49 AIQPITNIRHIHSPLVQQADSIAQ-KACSLHELKSLLRSFHDCHL-CSTSLSTICATQTE 106 A + I + Q ++ KA +L ++ + C L + + + A Sbjct: 109 APPDMPLISFNARAELPQHRALPDDKAATLQSVRHHIGDCTRCPLAYAGRRNIVFADGNP 168 Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL 166 LM +G P ++ SG PF GK G +L+ M+ ++ + R +++I+ I PPGNRN Sbjct: 169 NARLMFVGEGPGADEDASGVPFVGKAGQLLNNMINAMGLKREEVYIANIVKCRPPGNRNP 228 Query: 167 SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII 226 +E C ++ QI+++ P+I++ +G + G+W ++ Sbjct: 229 EPVEANTCSQFLVDQIDIVQPQIIVALGAIAATYLLGVKRPLVA-LRGQWHDV----RGS 283 Query: 227 PTLATVHPQELIQYPLIKKNTWHALITLK 255 T T HP L++ P +K W L + Sbjct: 284 KTAVTYHPAYLLRDPSMKGEAWKDLQRVM 312 >gi|289577329|ref|YP_003475956.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacter italicus Ab9] gi|297543618|ref|YP_003675920.1| phage SPO1 DNA polymerase-like protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|289527042|gb|ADD01394.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacter italicus Ab9] gi|296841393|gb|ADH59909.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 186 Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 44/185 (23%), Positives = 82/185 (44%), Gaps = 5/185 (2%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L EL C L T + + ++ +G P +++ G+PF G+ G +L Sbjct: 6 LKELYLECLHCTKCDLSKTKTNMVFGEGNLRAKVIFVGEGPGRDEDLQGRPFVGRAGQLL 65 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 +KML+ + + R +++I+ I PP NR E++ C P + Q+ +I+PKI++ +G Sbjct: 66 NKMLEEVGLKRGEVYIANIVKCRPPNNRVPLQSEVDACLPYLRNQVAIIAPKIIVCLGAT 125 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 + K G+W + +AT HP +++ P + +K+ Sbjct: 126 AAKAIID-KNFKITVMRGQWFE----RKGVKIIATYHPAAILRDPEKLEPAMEDFKKIKE 180 Query: 257 ALKNL 261 L L Sbjct: 181 ELDKL 185 >gi|154248846|ref|YP_001409671.1| phage SPO1 DNA polymerase-related protein [Fervidobacterium nodosum Rt17-B1] gi|154152782|gb|ABS60014.1| phage SPO1 DNA polymerase-related protein [Fervidobacterium nodosum Rt17-B1] Length = 202 Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 88/186 (47%), Gaps = 9/186 (4%) Query: 80 LKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKM 139 ++ +++ CHL +T+ +M +G P + ++ G+PF GK G +L K+ Sbjct: 10 IEERIKNCQSCHLHLLRKNTVPGEGNIYSPIMFVGEGPGEEEDNQGRPFVGKAGQLLTKI 69 Query: 140 LQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199 ++S+ I R ++I+ + PP NR +N+E++ C + QIE+I+P++++ +G+ Sbjct: 70 IESVNIKREDVYITNVVKCRPPNNRVPTNLEIQSCSHYLTAQIEIINPRMIIPLGSTAAT 129 Query: 200 FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK-----NTWHALITL 254 FF + + GK I HP L++ P +K TW + + Sbjct: 130 FFLG-KEEPITKIRGKKFTWKGD---IIIFPMFHPSYLLRNPSKEKGSPKDLTWQDIKEV 185 Query: 255 KKALKN 260 ++ Sbjct: 186 RRYYDQ 191 >gi|305662671|ref|YP_003858959.1| phage SPO1 DNA polymerase-related protein [Ignisphaera aggregans DSM 17230] gi|304377240|gb|ADM27079.1| phage SPO1 DNA polymerase-related protein [Ignisphaera aggregans DSM 17230] Length = 214 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 3/189 (1%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 S EL++ +R+ C L + + + +M IG P +++ G+PF G G + Sbjct: 6 SWQELENAIRNCTRCQLYRNRKNAVPGEGPKDAFVMFIGEAPGATEDEMGRPFVGAAGKL 65 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 L +++++ I R ++I+ + PP NR S+ E+E C + QI LI PKI++ +GN Sbjct: 66 LTMIMENLGISRDSVYITNVVKCRPPNNREPSDEEIEKCGIYLETQIRLIKPKIIVTLGN 125 Query: 196 KTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 F + + G+ N+ + + T+HP + P +K L Sbjct: 126 IAGKTIFFMGKERWEGIMKMRGRVYNMKIFDLTVYVIPTIHPAAGLYNPNLKNLLIQDLK 185 Query: 253 TLKKALKNL 261 +K+ + + Sbjct: 186 IVKECIDKM 194 >gi|312793048|ref|YP_004025971.1| phage SPO1 DNA polymerase-like protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312876719|ref|ZP_07736698.1| phage SPO1 DNA polymerase-related protein [Caldicellulosiruptor lactoaceticus 6A] gi|311796450|gb|EFR12800.1| phage SPO1 DNA polymerase-related protein [Caldicellulosiruptor lactoaceticus 6A] gi|312180188|gb|ADQ40358.1| phage SPO1 DNA polymerase-related protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 185 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 6/187 (3%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 + EL+S S C + + + + L+ +G P + ++ GKPF G+ G Sbjct: 3 TWEELESACLSCEKCPISKNRTNVVVGDGNKNAKLVFVGEAPGEEEDKQGKPFVGRAGKF 62 Query: 136 LDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 LD L S+E+ R +I I PP NR + +E + C P + QI+LI+PKI++ +G Sbjct: 63 LDLALTSLELSREKDFYICNILKCRPPNNRVPTEVEAQNCLPFLRAQIKLIAPKIIVCLG 122 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 + D K Q+ GKW +AT HP L++ P +++ + L ++ Sbjct: 123 ATAMKYILGKDL-KITQDRGKWFE----KGGFWIMATYHPAALLRDPGKREDFYRDLKSV 177 Query: 255 KKALKNL 261 K+ L+ + Sbjct: 178 KEKLEKI 184 >gi|113474288|ref|YP_720349.1| phage SPO1 DNA polymerase-like protein [Trichodesmium erythraeum IMS101] gi|110165336|gb|ABG49876.1| phage SPO1 DNA polymerase-related protein [Trichodesmium erythraeum IMS101] Length = 242 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 11/193 (5%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 ++ ++ C L + + ++M+IG P +++ G PF GK+G Sbjct: 46 KTMEQITFHCNQCRRCELGENRTNAVIGRGNPEAEIMVIGEAPGQNEDEQGLPFVGKSGQ 105 Query: 135 MLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 +LDK+LQS+E+ + +IS PP NR + E+ C+P ++ QI L++PKI+L Sbjct: 106 LLDKILQSVELSSDRHVYISNAIRCRPPENRTPTLKEVGACKPYLLEQIRLVNPKIILLT 165 Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTW 248 G D + + G+W + HP L++ P K W Sbjct: 166 GATAVKALTG-DKRGITKIRGQWIEWE----GRLCMPIFHPAYLLRNPSREPGKPKWLMW 220 Query: 249 HALITLKKALKNL 261 + +K+ L+ L Sbjct: 221 QDIQAVKQKLEEL 233 >gi|70606003|ref|YP_254873.1| uracil DNA glycosylase superfamily protein [Sulfolobus acidocaldarius DSM 639] gi|68566651|gb|AAY79580.1| uracil DNA glycosylase superfamily protein [Sulfolobus acidocaldarius DSM 639] Length = 213 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 39/188 (20%), Positives = 80/188 (42%), Gaps = 4/188 (2%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 L E+ + ++ C L + + +M IG P ++++ G+PF G G + Sbjct: 2 ELDEIANEIKVCRKCKLWMDRRNAVPGEGNPKAKVMFIGEAPGETEDEEGRPFVGSAGKL 61 Query: 136 LDKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 L K+++ I R ++ I+ + PP NR+ E+ C + QI LI P++++ +G Sbjct: 62 LTKLIEDTLGIKRDEVFITNVVKCRPPNNRDPEEDEITACSSYLDLQIRLIKPQVIVTLG 121 Query: 195 NKTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 + ++ N + ++ GK +I T HP + P ++ Sbjct: 122 RHSTSYILSKANIEFHSITKSRGKVYEWKIDDHVINIFPTYHPAAALYNPNLRSVLEEDF 181 Query: 252 ITLKKALK 259 ++K + Sbjct: 182 KMIRKLIN 189 >gi|222085329|ref|YP_002543859.1| DNA polymerase bacteriophage-type (uracil-DNA glycosylase) protein [Agrobacterium radiobacter K84] gi|221722777|gb|ACM25933.1| DNA polymerase bacteriophage-type (uracil-DNA glycosylase) protein [Agrobacterium radiobacter K84] Length = 255 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 82/238 (34%), Positives = 124/238 (52%), Gaps = 6/238 (2%) Query: 28 FDEPNNEATYESQRKEKSIDSAIQPITNIRH-----IHSPLVQQADSIAQKACSLHELKS 82 + P A Q + + V+QA A+ A SL ELK+ Sbjct: 15 VETPQPAARPAQQPERRQAAPKAAAPAAKPRSAPAIPDEQAVEQARFAAESARSLSELKT 74 Query: 83 LLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142 L +F+ C+L +++ STI A+ +M+IG PS D+ G PF+G+TG +LDKML + Sbjct: 75 ALEAFNSCNLKNSARSTIFASGAPEGRIMVIGPMPSADDDREGAPFAGRTGLLLDKMLAA 134 Query: 143 IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202 I + R I ++ + PW PPGNR S E+EICRP I RQI L P+ LL +GN T FF Sbjct: 135 IGLKRNDILLTNVIPWRPPGNRAPSAPEIEICRPFIERQITLAEPQALLLLGNFTARHFF 194 Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 ++ G+W ++ IP +A++HPQEL+ P+ K+ W+ L+ + + Sbjct: 195 GSNETIHG-LRGQWRDVTISGRAIPAIASLHPQELLTAPINKRLAWNDLLAFRTRIDA 251 >gi|302872283|ref|YP_003840919.1| phage SPO1 DNA polymerase-related protein [Caldicellulosiruptor obsidiansis OB47] gi|302575142|gb|ADL42933.1| phage SPO1 DNA polymerase-related protein [Caldicellulosiruptor obsidiansis OB47] Length = 185 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 6/187 (3%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 + EL++ S C + + + + L+ +G P + ++ GKPF G+ G Sbjct: 3 TWEELENACISCEKCPISKNRTNVVVGDGNKNAKLVFVGEAPGEEEDKQGKPFVGRAGKF 62 Query: 136 LDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 LD L S+E+ R +I I PP NR + +E + C P + QI+LISPKI++ +G Sbjct: 63 LDLALTSLELSREKDFYICNILKCRPPNNRVPTEVEAQNCLPFLKAQIKLISPKIIVCLG 122 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 + D K Q+ GKW +AT HP L++ P +++ + L ++ Sbjct: 123 ATAMKYILGKDL-KITQDRGKWFE----KGGFWIMATYHPAALLRDPGKREDFYRDLKSV 177 Query: 255 KKALKNL 261 K+ L+ + Sbjct: 178 KERLEKI 184 >gi|206560476|ref|YP_002231240.1| uracil DNA glycosylase superfamily protein [Burkholderia cenocepacia J2315] gi|198036517|emb|CAR52414.1| uracil DNA glycosylase superfamily protein [Burkholderia cenocepacia J2315] Length = 343 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 54/240 (22%), Positives = 89/240 (37%), Gaps = 18/240 (7%) Query: 29 DEPNNEATYESQRKEKSIDSAIQP------------ITNIRHIHSPLVQQADSIAQKACS 76 D P +A + P + A Sbjct: 92 DRPRAQAASPASTDTMPPTGDAPPAADDDFAWFDAAPPGESVPVPAAESRPAGTPVAALD 151 Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L + + C LC +T+ D M+IG P ++++ G+PF G+ G +L Sbjct: 152 WDALAARVADCTLCRLCEKRTNTVFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLL 211 Query: 137 DKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 D MLQS+ + R ++I+ + PPGNRN E+ C P + RQ+ L+ PK+++ +G Sbjct: 212 DNMLQSLSLKRGDNVYIANVIKCRPPGNRNPEPDEVASCEPYLQRQVALVKPKLIVALGR 271 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 DA G+ +P + T HP L++ K W L + Sbjct: 272 FAAQTLLKTDASIAS-LRGRVHAYE----GVPVIVTYHPAYLLRSLQDKSKAWADLCLAR 326 >gi|75907116|ref|YP_321412.1| phage SPO1 DNA polymerase-like protein [Anabaena variabilis ATCC 29413] gi|75700841|gb|ABA20517.1| Phage SPO1 DNA polymerase-related protein [Anabaena variabilis ATCC 29413] Length = 227 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 47/206 (22%), Positives = 84/206 (40%), Gaps = 11/206 (5%) Query: 62 PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121 P + ++ EL C L ST + +M++G P ++ Sbjct: 23 PTDAKIPIPPGTYTNMTELAQHCNQCQRCELGSTRTHAVVGRGNLKAPIMVVGEAPGQNE 82 Query: 122 NISGKPFSGKTGNMLDKMLQSIE-IMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180 + +G PF G++G +LDK+L S++ ++I+ I+ PP NR + EM C P ++ Sbjct: 83 DETGLPFVGRSGQLLDKILASVDLTTEHDVYIANINKCRPPDNRVPTPNEMAACLPYLLE 142 Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 QI L++PKI+L G D + + G+W + HP L++ Sbjct: 143 QIRLVNPKIILLTGATAVKGLTG-DKRGITKIRGQWIEWE----GHLCMPIFHPSYLLRN 197 Query: 241 PLI-----KKNTWHALITLKKALKNL 261 P K W + ++ + Sbjct: 198 PSKEQGSPKWLMWQDIRAVRAKYDEI 223 >gi|134094968|ref|YP_001100043.1| putative DNA polymerase-related protein, bacteriophage-type [Herminiimonas arsenicoxydans] gi|133738871|emb|CAL61918.1| Putative phage SPO1 DNA polymerase-related protein, uracil-DNA glycosylase family [Herminiimonas arsenicoxydans] Length = 283 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 50/239 (20%), Positives = 90/239 (37%), Gaps = 12/239 (5%) Query: 31 PNNEATYESQRKEK---SIDSAIQPITNIRHIHSPLVQQADSIAQKAC-SLHELKSLLRS 86 P+ + T + +A P+ + + V + S A +LKS++ S Sbjct: 44 PSMQTTAVAVTTSAWAERTPAAAVPLHAPVTLTASEVATSTSFADIVQMDWAQLKSVVAS 103 Query: 87 FHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM 146 C LC + T+ + + +G P +++ G+PF G G +LD M ++ + Sbjct: 104 CTQCGLCKSRTQTVFGVGDQKARWLFVGEGPGRNEDFQGEPFVGPAGKLLDNMFGAMGLK 163 Query: 147 R-TQIHISMISPWHPPGNRNLS----NIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 R +I+ I P E+ C P + RQI LI P +++ +G Sbjct: 164 RGENTYIANIVKCRPIDAGKHDRPPAAEEVAACIPYLERQIALIKPTVIVALGKTAAISL 223 Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 D GK ++ +P + T HP L++ K W L + + Sbjct: 224 LKLDPATPV---GKLRGTVHRYADLPLIVTYHPAYLLRNLKDKSKAWADLCLAMQTYAD 279 >gi|210620993|ref|ZP_03292378.1| hypothetical protein CLOHIR_00321 [Clostridium hiranonis DSM 13275] gi|210154977|gb|EEA85983.1| hypothetical protein CLOHIR_00321 [Clostridium hiranonis DSM 13275] Length = 194 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 47/186 (25%), Positives = 84/186 (45%), Gaps = 5/186 (2%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 S L+S ++ + C L + + +++IG P + +++SG PF G G + Sbjct: 6 SWEILESACKTCNRCRLAENRTNVVVGGGNRKAKILLIGEGPGEKEDLSGVPFVGPAGQL 65 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 LDKML I++ R ++I+ + PPGNR+ E C + Q LI P+I++ +G Sbjct: 66 LDKMLACIDLSRNDVYIANVVKCRPPGNRDPEPDEKNCCIEYLRYQFALIKPQIIVCLGR 125 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 ++ + + G W +AT HP L++ K+ + L +K Sbjct: 126 IAAQSIIDSK-FRITKEHGIWYKKKNCW----MIATYHPSALLRDAAKKRTAFEDLKEIK 180 Query: 256 KALKNL 261 K + L Sbjct: 181 KKIDEL 186 >gi|152979854|ref|YP_001353212.1| DNA polymerase bacteriophage-type [Janthinobacterium sp. Marseille] gi|151279931|gb|ABR88341.1| DNA polymerase bacteriophage-type [Janthinobacterium sp. Marseille] Length = 286 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 48/236 (20%), Positives = 85/236 (36%), Gaps = 12/236 (5%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P + Q D S ++Q A IA + +LK ++ + +C Sbjct: 53 PLRQQVVAEQSLSAWGDETPAAPVLAPAAVSAVLQPARDIA--SMGWEQLKEVVSNCTEC 110 Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQ 149 LC T+ + + +G P +++ G+PF G G +LD M ++ + R Sbjct: 111 GLCKGRTQTVFGVGDQKAKWLFVGEGPGRNEDFQGEPFVGPAGKLLDNMFIAMGLKRGEN 170 Query: 150 IHISMISPWHPPGNRN----LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 +I+ I P E + C P + RQI L++P +++ +G D Sbjct: 171 TYIANIVKCRPTDENKRDRAPVAQESDACMPYLQRQIALVNPTVIVALGKTAALSLLKLD 230 Query: 206 A-QKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 + G IP + T HP L++ K W L + + Sbjct: 231 PATPVARLRGTVHRYA----DIPVVVTYHPAYLLRTLKDKSKAWADLCLAMQTYAD 282 >gi|163783925|ref|ZP_02178897.1| predicted repair protein [Hydrogenivirga sp. 128-5-R1-1] gi|159880810|gb|EDP74342.1| predicted repair protein [Hydrogenivirga sp. 128-5-R1-1] Length = 214 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 5/182 (2%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 K L EL ++ C L + LM +G P ++ G+PF G+ Sbjct: 30 DKTKLLEELNKEIQECKKCDLYKNRKQAVLGEGNPNAKLMFVGEAPGADEDRLGRPFVGR 89 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191 G +L +++++ R + +I+ ++ PPGNR + E E C P + +QIE+I PK+L Sbjct: 90 AGQLLTRLIEATGHKREEFYIANVNKCRPPGNRTPTPWEQEACFPFLEKQIEIIDPKVLC 149 Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 +G F + G+ N + T+HP +++ P ++ + + Sbjct: 150 LLGAAAARAFLK-RPVSITKERGEVLNWE----GRKLILTLHPAYILRNPSAEELLFEDI 204 Query: 252 IT 253 Sbjct: 205 KK 206 >gi|186682234|ref|YP_001865430.1| phage SPO1 DNA polymerase-related protein [Nostoc punctiforme PCC 73102] gi|186464686|gb|ACC80487.1| phage SPO1 DNA polymerase-related protein [Nostoc punctiforme PCC 73102] Length = 227 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 11/205 (5%) Query: 62 PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121 P + ++ EL H C L T + +M+IG P ++ Sbjct: 23 PTDAKIAIAPGTYSTITELAQHCDRCHRCPLGDTRTHAVVGRGNLKAPIMVIGEAPGQNE 82 Query: 122 NISGKPFSGKTGNMLDKMLQSIE-IMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180 + +G PF G++G +L+K+L S+ ++I+ I+ PP NR + E+ C P ++ Sbjct: 83 DETGLPFVGRSGQLLEKILASVNLTTEHDVYIANINKCRPPDNRVPTPTEVAACLPYLLE 142 Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 QI L+ PKI+L G D + + G+W + HP L++ Sbjct: 143 QIRLVDPKIILLTGATAVKGITG-DKRGITKIRGQWLEWE----GRLCMPIFHPSYLLRN 197 Query: 241 PLI-----KKNTWHALITLKKALKN 260 P K W + ++ L Sbjct: 198 PSKERGAPKWLMWQDIQAVRAKLDE 222 >gi|282895506|ref|ZP_06303643.1| Phage SPO1 DNA polymerase-related protein [Raphidiopsis brookii D9] gi|281199539|gb|EFA74402.1| Phage SPO1 DNA polymerase-related protein [Raphidiopsis brookii D9] Length = 225 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 48/192 (25%), Positives = 78/192 (40%), Gaps = 11/192 (5%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 +++EL + H C L T + +MIIG P ++ +G PF GK+G + Sbjct: 36 NINELTLHCENCHRCGLGKTRTHAVVGRGNPQAKIMIIGEAPGQHEDETGLPFVGKSGQL 95 Query: 136 LDKMLQSIE-IMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 LDK+L S+ ++I I PP NR ++ E CRP ++ QI L+ PKI+L G Sbjct: 96 LDKILASVNLTTEQDVYICNIVKCRPPENRVPTSEESNACRPYLLEQIRLVDPKIILLTG 155 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWH 249 N + G+W + HP L++ K W Sbjct: 156 ATAVKGVTGNKL-PITKIRGQWLEWE----GRLCMPIFHPSYLLRNSAKGQGSPKWLMWQ 210 Query: 250 ALITLKKALKNL 261 + ++ + Sbjct: 211 DIQEIRNRYDQI 222 >gi|326204226|ref|ZP_08194086.1| phage SPO1 DNA polymerase-related protein [Clostridium papyrosolvens DSM 2782] gi|325985737|gb|EGD46573.1| phage SPO1 DNA polymerase-related protein [Clostridium papyrosolvens DSM 2782] Length = 190 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 84/186 (45%), Gaps = 5/186 (2%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 + +L S + +C L T + + +M IG P + ++I G PF G G + Sbjct: 3 NWDQLNSTCSNCRNCDLAGTRTNIVIGRGNPSAPIMFIGEGPGEQEDIQGLPFVGPAGQL 62 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 L+ +L++++ + +I+ + PP NR + E E C P + Q+ LI P+I++ +G+ Sbjct: 63 LETLLEALKFKPDEYYIANVVKCRPPNNRVPNEEEAEKCLPYLRNQVSLIRPRIIVCLGS 122 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 + D K + G+W + T HP L++ K+ + + +K Sbjct: 123 TAAKYVVARD-IKITKIRGQWIE----RKKFWIMPTFHPAALLRDQSKKELLFKDIKEVK 177 Query: 256 KALKNL 261 K + L Sbjct: 178 KKINQL 183 >gi|307596060|ref|YP_003902377.1| phage SPO1 DNA polymerase-related protein [Vulcanisaeta distributa DSM 14429] gi|307551261|gb|ADN51326.1| phage SPO1 DNA polymerase-related protein [Vulcanisaeta distributa DSM 14429] Length = 215 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 47/187 (25%), Positives = 82/187 (43%), Gaps = 6/187 (3%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 EL +L+ + C L + + +MIIG P + ++ G+PF G G +L Sbjct: 14 DELVNLMLNCTKCKLHKSRRRVVPGEGPLNAKIMIIGEAPGEREDEEGRPFVGAAGQLLT 73 Query: 138 KMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197 K+L ++ I R +++I+ + PP NR+ E+E CRP ++ QI +I P+I++ +G + Sbjct: 74 KLLNNVGIRREEVYITNVVKCRPPNNRDPEPDEIEACRPYLITQILMIRPQIIICLGRHS 133 Query: 198 KNFFFNNDAQK------TYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 GK N+ + L T HP + P ++ L Sbjct: 134 AREILTMAGYPEKSVSNISSIRGKVFNVKLGDLNVKVLPTYHPAAALYNPRLRGVIEEDL 193 Query: 252 ITLKKAL 258 +K L Sbjct: 194 RKVKTLL 200 >gi|307609081|emb|CBW98520.1| hypothetical protein LPW_03501 [Legionella pneumophila 130b] Length = 212 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 51/184 (27%), Positives = 84/184 (45%), Gaps = 5/184 (2%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + S C L T T+ + LMIIG P ++ G+PF GK G Sbjct: 29 KHLAALADEVASCVRCSLHKTRTQTVFSRGNPKAKLMIIGEAPGFYEDQKGQPFVGKAGF 88 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 +L+KM++SIE+ ++I+ + PP NR+ + E+ C + RQI+LI P ++L +G Sbjct: 89 LLNKMIRSIEMTENDVYIANVLKCRPPNNRDPALEEISQCSSFLTRQIKLIKPHLILALG 148 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 F + + N + P + + HP L++ P KK + + + Sbjct: 149 RFAGQFLLDKPLPLK-----QLRNHIHYYDNTPFIVSYHPAYLLRNPSDKKKAYIDWLAV 203 Query: 255 KKAL 258 K L Sbjct: 204 KNFL 207 >gi|313903540|ref|ZP_07836930.1| phage SPO1 DNA polymerase-related protein [Thermaerobacter subterraneus DSM 13965] gi|313466093|gb|EFR61617.1| phage SPO1 DNA polymerase-related protein [Thermaerobacter subterraneus DSM 13965] Length = 307 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 44/187 (23%), Positives = 83/187 (44%), Gaps = 6/187 (3%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 + L+ +++ C L + + LM+IG P ++ G+PF G+ G + Sbjct: 13 DMATLEQVVKGCTACGLRAGCRGVVFGDGNPSARLMLIGEGPGADEDRLGRPFVGRAGQL 72 Query: 136 LDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 LD++L + R + +I+ I PPGNR + E C P + Q+ L+ P I++ +G Sbjct: 73 LDRILAACGFDRQRHVYIANIVKCRPPGNRTPTPEERAACLPNLRAQMWLVQPVIVVLLG 132 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 + + A + + G+W + + T HP L++ P +K+ WH + Sbjct: 133 STALQALVDP-AARISRARGQWIV----RDGVWYMPTYHPAALLRNPALKRECWHDFKKV 187 Query: 255 KKALKNL 261 + L Sbjct: 188 IDKYREL 194 >gi|304319860|ref|YP_003853503.1| hypothetical protein PB2503_01417 [Parvularcula bermudensis HTCC2503] gi|303298763|gb|ADM08362.1| hypothetical protein PB2503_01417 [Parvularcula bermudensis HTCC2503] Length = 299 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 65/268 (24%), Positives = 102/268 (38%), Gaps = 25/268 (9%) Query: 7 LSQEQILTIALFYADSGVYWVFDE-------------PNNEATYESQRKEKSID----SA 49 L + L + +Y SGV P A +R+ + Sbjct: 22 LDRATALALLAWYRASGVDTAESAEPSDMRDWPTHGFPVPRALAGGERRPPLPPGNEVAP 81 Query: 50 IQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD 109 + V A ++A+ +L L + F C L + + T+ G Sbjct: 82 TAKPPSSAGGSDEAVMAATALAEATTTLPALADAIAGFDGCPLKAAARRTVVYDGVIGAR 141 Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH------ISMISPWHPPGN 163 L+IIG P ++ GKPF GK G +LD ML +I RT+ I+ W PPGN Sbjct: 142 LLIIGEGPGRDEDRIGKPFVGKAGGLLDLMLHAIGYSRTEADGRGDVLITNAVYWRPPGN 201 Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC-TP 222 R + E IC P + R I L +P++++ +GN + + A + G W + Sbjct: 202 RAPTGEEQAICLPFLRRFITLAAPEVIILMGNVSTQALY-PGAPGITRTRGSWREWPLSD 260 Query: 223 HSIIPTLATVHPQELIQYPLIKKNTWHA 250 L HP L++ P K+ W Sbjct: 261 GRQAAVLPMFHPAFLLRAPAQKRLAWAD 288 >gi|52840517|ref|YP_094316.1| bacteriophage related DNA polymerase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52627628|gb|AAU26369.1| bacteriophage related DNA polymerase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 212 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 5/184 (2%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + S C L T T+ + LMIIG P ++ G+PF GK G Sbjct: 29 KHLAALADEVASCVRCSLHKTRTQTVFSRGNPKAKLMIIGEAPGFYEDQKGQPFVGKAGL 88 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 +L+KM++SIE+ I+I+ + PP NR+ + E+ C + RQI+LI P ++L +G Sbjct: 89 LLNKMIRSIEMTENDIYIANVLKCRPPNNRDPALEEISQCSSFLTRQIQLIKPHLILALG 148 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 F + + N + P + + HP L++ P KK + + + Sbjct: 149 RFAGQFLLDKPLPLK-----QLRNHIHYYDNTPFIVSYHPAYLLRNPSDKKKAYIDWLAV 203 Query: 255 KKAL 258 K L Sbjct: 204 KNFL 207 >gi|319790238|ref|YP_004151871.1| phage SPO1 DNA polymerase-related protein [Thermovibrio ammonificans HB-1] gi|317114740|gb|ADU97230.1| phage SPO1 DNA polymerase-related protein [Thermovibrio ammonificans HB-1] Length = 235 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 51/196 (26%), Positives = 86/196 (43%), Gaps = 4/196 (2%) Query: 68 DSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127 + L ++K + C LC T + + +LM +G P + +++ G+P Sbjct: 40 ERAFDPIEELEKVKEEAQKCCKCRLCKTRHNVVFGEGDPQTNLMFVGEAPGEQEDLQGRP 99 Query: 128 FSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP 187 F G+ G +L K L + R QI+I+ + PP NR+ + E+E C P + +QIELISP Sbjct: 100 FVGRAGQLLSKFLNLYGVTRDQIYITNVLKCRPPNNRDPAPDEIEACYPFLEKQIELISP 159 Query: 188 KILLFIGNKTKNFFFN-NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKN 246 K++L +G N + + GK + + T HP L++ + Sbjct: 160 KVILCLGAFAARTILNLPERTPISRIRGKEHKTTIGGVEVTVIPTFHPAYLLRNRRGEPE 219 Query: 247 TWHAL---ITLKKALK 259 L + L LK Sbjct: 220 FQKDLELALRLAGFLK 235 >gi|254424996|ref|ZP_05038714.1| uracil-DNA glycosylase, family 4 [Synechococcus sp. PCC 7335] gi|196192485|gb|EDX87449.1| uracil-DNA glycosylase, family 4 [Synechococcus sp. PCC 7335] Length = 233 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 51/224 (22%), Positives = 90/224 (40%), Gaps = 13/224 (5%) Query: 47 DSAIQPITNIRHIHSPLVQQADSIAQKACS---LHELKSLLRSFHDCHLCSTSLSTICAT 103 S I+ + + S+ + L L +S C L T + + + Sbjct: 10 ASDIEATPTPTDFDPDKIPTSASVPIPPGTYDSLTPLAVHCKSCQRCELAQTRTNVVVSR 69 Query: 104 QTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM-RTQIHISMISPWHPPG 162 +M+IG P ++ G PF G++G +L+K+L ++ + ++I I PPG Sbjct: 70 GNPNAPIMVIGEGPGQQEDEQGLPFVGRSGQLLEKILGAVRLDTEKDVYICNIVKCRPPG 129 Query: 163 NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP 222 NRN E+ CRP I+ QI L+ PKI+L G ++ + + G W Sbjct: 130 NRNPLASEINACRPYILEQIRLVDPKIILLTGATAVKGIIPSEKRGITKIRGTWIEWE-- 187 Query: 223 HSIIPTLATVHPQELIQYPLI-----KKNTWHALITLKKALKNL 261 + +HP L++ P K W + ++ L + Sbjct: 188 --GRQCMPILHPAYLLRNPSRDPGKPKWLMWQDIQAVRAKLDEI 229 >gi|327398392|ref|YP_004339261.1| phage SPO1 DNA polymerase-like protein [Hippea maritima DSM 10411] gi|327181021|gb|AEA33202.1| phage SPO1 DNA polymerase-related protein [Hippea maritima DSM 10411] Length = 209 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 43/174 (24%), Positives = 70/174 (40%), Gaps = 5/174 (2%) Query: 87 FHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM 146 C L T + + DLM +G P +++ G+PF G+ G +L +L+ I I Sbjct: 41 CKGCELHKTRTNVVFGEGNINADLMFVGEAPGRDEDVQGRPFVGRAGRLLRDILRDIGIK 100 Query: 147 RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206 ++I+ PP NR+ E+ C + +QI LI PKI+ +G + N Sbjct: 101 PQDVYIANCLKCRPPNNRDPLPEELVACFGYLKQQISLIKPKIIATLGRYSTYELTNQKG 160 Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 GK I + HP L++ P L +K+ L+ Sbjct: 161 ALGT-LRGKVFVY----GNIKVIPLYHPAYLLRNPKAVDVFIEDLKKVKQLLEQ 209 >gi|317970146|ref|ZP_07971536.1| phage SPO1 DNA polymerase-related protein [Synechococcus sp. CB0205] Length = 199 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 15/199 (7%) Query: 73 KACSLH-ELKSLLRSFHDCHLCS---TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128 A SL +L SL S C LC + + + LM+IG P ++ G+PF Sbjct: 2 TATSLEQDLASLAESCDACRLCKLGSSRSQVVVSRGNPQARLMVIGEGPGAQEDEQGQPF 61 Query: 129 SGKTGNMLDKMLQSIEIM-RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP 187 G++G +LD+ML+S+ I ++ I PP NR + +EM C+P + RQI L+ P Sbjct: 62 VGRSGQLLDRMLESVGIDSNHDAYVCNIVKCRPPENRKPTALEMASCKPWLDRQIALVDP 121 Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI---- 243 ++L G + G+W + HP L++ P Sbjct: 122 AVILLAGATAVEGLLGIKG-GMTKIRGQWRQWEGRW----LMPVFHPSYLLRNPSKERGA 176 Query: 244 -KKNTWHALITLKKALKNL 261 K TW L +++ L L Sbjct: 177 PKWLTWQDLQDVQRRLAQL 195 >gi|282856757|ref|ZP_06266018.1| uracil-DNA glycosylase family 4 protein [Pyramidobacter piscolens W5455] gi|282585380|gb|EFB90687.1| uracil-DNA glycosylase family 4 protein [Pyramidobacter piscolens W5455] Length = 205 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 84/187 (44%), Gaps = 10/187 (5%) Query: 80 LKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKM 139 L+ C LC + + + + +M +G P + ++ SG+PF G G +L ++ Sbjct: 22 LRDAANRCEQCGLCRSRKNVVVGEGSLTSRIMFVGEGPGEVEDNSGRPFVGPAGQLLTRI 81 Query: 140 LQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199 L++ + R ++I+ I PP NR E+ C+ + QI L+ P+I++ +GN Sbjct: 82 LEAAKFSRDDVYITNIVKCRPPNNRVPEIEEVLSCQRWLEAQIALLQPQIIVCLGNTPLK 141 Query: 200 FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK-----NTWHALITL 254 +F + + + G+W + HP L++ ++ TW + + Sbjct: 142 WFLHGT-EGITKMRGRWFTW----RGAALMPMFHPSYLLRNQSRERGGPKDLTWRDIQEI 196 Query: 255 KKALKNL 261 ++ ++L Sbjct: 197 RQRYESL 203 >gi|317121114|ref|YP_004101117.1| phage SPO1 DNA polymerase-related protein [Thermaerobacter marianensis DSM 12885] gi|315591094|gb|ADU50390.1| phage SPO1 DNA polymerase-related protein [Thermaerobacter marianensis DSM 12885] Length = 333 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 43/198 (21%), Positives = 89/198 (44%), Gaps = 6/198 (3%) Query: 65 QQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNIS 124 + ++ + + L+ +++ C L + + LM+IG P ++ Sbjct: 2 ARPEAELLRIADMAALEQVVKGCTACRLRAGCRGVVFGDGNPAARLMLIGEGPGADEDRL 61 Query: 125 GKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIE 183 G+PF G+ G +LD++L + R + +I+ + PPGNR + E C P + Q+ Sbjct: 62 GRPFVGRAGQLLDRILAACGFDRQRHVYIANVVKCRPPGNRTPTPDERAACLPNLRAQMR 121 Query: 184 LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI 243 L++P I++ +G+ + A + + G+W + + T HP L++ P + Sbjct: 122 LVNPVIVVLLGSTALQALIDP-AARITRWRGQW----IHRDGVWYMPTYHPAALLRNPSL 176 Query: 244 KKNTWHALITLKKALKNL 261 K++ WH + + L Sbjct: 177 KRDCWHDFKKVIDKYREL 194 >gi|209524410|ref|ZP_03272959.1| phage SPO1 DNA polymerase-related protein [Arthrospira maxima CS-328] gi|209495201|gb|EDZ95507.1| phage SPO1 DNA polymerase-related protein [Arthrospira maxima CS-328] Length = 234 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 81/206 (39%), Gaps = 11/206 (5%) Query: 62 PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121 P +L ++ C L + +MIIG P + Sbjct: 31 PKNAHTPIPPGTYQTLAQIADHCNRCSRCQLGKNRTHAVIGRGNPTAPIMIIGEAPGQHE 90 Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRT-QIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180 + G PF G++G +LDK+L S+ + +++IS PP NR + E++ C+P ++ Sbjct: 91 DEQGLPFVGRSGQLLDKILDSVGLSTDTEVYISNAIRCRPPENRTPTASELQACKPYLLE 150 Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 QI LI+P+I+L G D + + G+W + HP L++ Sbjct: 151 QIRLINPQIILLTGATAVKSLLG-DKRPITKIRGQWFQWE----GRQCMPIFHPAYLLRN 205 Query: 241 PLI-----KKNTWHALITLKKALKNL 261 K W + +++ L + Sbjct: 206 SSRDVGKPKWLMWQDMQAVRQRLNEI 231 >gi|222529822|ref|YP_002573704.1| phage SPO1 DNA polymerase-related protein [Caldicellulosiruptor bescii DSM 6725] gi|222456669|gb|ACM60931.1| phage SPO1 DNA polymerase-related protein [Caldicellulosiruptor bescii DSM 6725] Length = 185 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 6/187 (3%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 + EL++ S C + + + + L+ +G P + ++ GKPF G+ G Sbjct: 3 TWEELENACLSCEKCPISKNRTNVVVGDGNKNAKLVFVGEAPGEEEDKQGKPFVGRAGKF 62 Query: 136 LDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 LD L S+E+ R +I I PP NR + +E + C P + QI+LISPKI++ +G Sbjct: 63 LDLALASLELSREKDFYICNILKCRPPNNRVPTELEAQNCLPFLRAQIKLISPKIIVCLG 122 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 + D K Q+ GKW +AT HP L++ P +++ + L ++ Sbjct: 123 ATAMKYILGKDL-KITQDRGKWFE----KGSFLIMATYHPAALLRDPGKREDFYRDLKSV 177 Query: 255 KKALKNL 261 K+ L+ + Sbjct: 178 KERLEKI 184 >gi|187251249|ref|YP_001875731.1| Uracil-DNA glycosylase [Elusimicrobium minutum Pei191] gi|186971409|gb|ACC98394.1| Uracil-DNA glycosylase [Elusimicrobium minutum Pei191] Length = 297 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 55/235 (23%), Positives = 93/235 (39%), Gaps = 16/235 (6%) Query: 39 SQRKEKSIDSAIQPITNIRHIHSPLVQQADSI-AQKACSLHELKSLLRSFHDCHLCSTSL 97 S S + Q + + +P + I + K L+ L + + C L T L Sbjct: 55 SAESVLSAQNNAQTLKEDSSMPAPQTPKTKKINSNKEAELNALAEQILTCKKCPLGETRL 114 Query: 98 STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP 157 + + LM IG P ++ G+PF G+ G +L KM++++ + R ++ I+ + Sbjct: 115 NAVPGEGNADAKLMFIGEGPGFDEDHQGRPFIGRAGTLLTKMIEAMGLKREEVFIANMVK 174 Query: 158 WH----------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207 H +R S E+ CR I QI LI P+ ++ +G DA Sbjct: 175 CHPMTDPSNPEKHGNDRAPSKEEIAYCRKYIEAQIALIQPEFIVALGGVAAKSLIK-DAD 233 Query: 208 KTYQNLGKWSNLCTPH----SIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 K L + +AT HP L++ P KK+ W L + K + Sbjct: 234 SLGALRNKVHTLELDNFDLEGKTKIVATYHPAALLRNPNWKKDAWADLQMVMKEM 288 >gi|302342653|ref|YP_003807182.1| phage SPO1 DNA polymerase-related protein [Desulfarculus baarsii DSM 2075] gi|301639266|gb|ADK84588.1| phage SPO1 DNA polymerase-related protein [Desulfarculus baarsii DSM 2075] Length = 236 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 51/216 (23%), Positives = 81/216 (37%), Gaps = 5/216 (2%) Query: 45 SIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQ 104 S D + + SP+ A L + + C L + Sbjct: 26 SADDLARLLALAGAAPSPVASVAAPPPDLPLELESMALAVGQCKRCPLAHGRNKAVFGQG 85 Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + LM IG P ++ G PF G G +LD ML ++ + R ++++ I PP NR Sbjct: 86 PDDARLMFIGEAPGAQEDQQGLPFVGPAGRLLDNMLAAVGLRREAVYVTNIVKCRPPNNR 145 Query: 165 NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS 224 + E+ CRP + Q + PK++ +G +DA G W Sbjct: 146 DPRPEEVAACRPWLEAQARAVGPKVICTLGRPAALAVLGSDA-PISALRGNWHEA----L 200 Query: 225 IIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 L T HP L++ P K + + L ALK+ Sbjct: 201 GARVLPTFHPAYLLRSPQRKGQAYQDMKALALALKD 236 >gi|148358472|ref|YP_001249679.1| bacteriophage-like DNA polymerase [Legionella pneumophila str. Corby] gi|296105821|ref|YP_003617521.1| DNA polymerase bacteriophage-type [Legionella pneumophila 2300/99 Alcoy] gi|148280245|gb|ABQ54333.1| bacteriophage related DNA polymerase [Legionella pneumophila str. Corby] gi|295647722|gb|ADG23569.1| DNA polymerase bacteriophage-type [Legionella pneumophila 2300/99 Alcoy] Length = 212 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 51/184 (27%), Positives = 84/184 (45%), Gaps = 5/184 (2%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + S C L T T+ + LMIIG P ++ G+PF GK G Sbjct: 29 KHLAALADEVASCVRCSLHKTRTQTVFSRGNPKAKLMIIGEAPGFYEDQKGQPFVGKAGF 88 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 +L+KM++SIE+ ++I+ + PP NR+ + E+ C + RQI+LI P ++L +G Sbjct: 89 LLNKMIRSIEMTENDVYIANVLKCRPPNNRDPALEEISQCSSFLTRQIKLIKPHLILALG 148 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 F + + N + P + + HP L++ P KK + + + Sbjct: 149 RFAGQFLLDKPLPLK-----QLRNHIHYYDNTPFIVSYHPAYLLRNPSDKKKAYIDWLAV 203 Query: 255 KKAL 258 K L Sbjct: 204 KNFL 207 >gi|302392090|ref|YP_003827910.1| phage SPO1 DNA polymerase-related protein [Acetohalobium arabaticum DSM 5501] gi|302204167|gb|ADL12845.1| phage SPO1 DNA polymerase-related protein [Acetohalobium arabaticum DSM 5501] Length = 214 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 57/185 (30%), Positives = 89/185 (48%), Gaps = 5/185 (2%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 Q+ +L E+K + C L + T+ T LM +G P ++ G+PF GK Sbjct: 21 QRFNNLDEIKEVAVECERCELHKECIQTVFGTGNSDTGLMFVGEGPGRQEDEQGEPFVGK 80 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191 G + +K+L++ EI R ++IS I PPGNRN EM+ C + ++I+LI P I++ Sbjct: 81 AGQLFNKILKAAEIKRKDVYISNIVKCRPPGNRNPKFSEMKSCLWFLAQEIKLIQPMIIV 140 Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 +G+ + D K + G W L T HP L++ KK TWH Sbjct: 141 PLGSIAVKGLLDPDG-KITELRGNWVERE----GYYLLPTFHPAALLRNEQWKKPTWHDF 195 Query: 252 ITLKK 256 + +KK Sbjct: 196 LKIKK 200 >gi|150020065|ref|YP_001305419.1| phage SPO1 DNA polymerase-related protein [Thermosipho melanesiensis BI429] gi|149792586|gb|ABR30034.1| phage SPO1 DNA polymerase-related protein [Thermosipho melanesiensis BI429] Length = 200 Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 76/184 (41%), Gaps = 9/184 (4%) Query: 82 SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 ++ C L + + ++ +G P + +++ G+PF G+ G +L K+L+ Sbjct: 12 ERIKECKACPLHENRTNVVPGEGNLDSPIVFVGEGPGEEEDLQGRPFVGRAGQLLTKILE 71 Query: 142 SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 S+ I R ++I+ I PP NR + E IC + Q+E+I+PK+++ +G F Sbjct: 72 SVNIKREDVYITNIVKCRPPNNRTPTKEEASICSHFLFAQLEIINPKMIVTLGKPALELF 131 Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWHALITLKK 256 + G I HP L++ P K TW + ++K Sbjct: 132 LGRT-VAITKVRGNEFKWR---GGIIVFPMFHPSYLLRNPSKAKGSPKDLTWQDIKRVRK 187 Query: 257 ALKN 260 Sbjct: 188 YYDQ 191 >gi|170290590|ref|YP_001737406.1| Uracil-DNA glycosylase [Candidatus Korarchaeum cryptofilum OPF8] gi|170174670|gb|ACB07723.1| Uracil-DNA glycosylase [Candidatus Korarchaeum cryptofilum OPF8] Length = 193 Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats. Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 1/185 (0%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L +L + C L + +M +G P +++ G+PF G G +L Sbjct: 3 LEDLAEEILRCEKCPLHLNRKRAVPGEGNPNSRIMFVGEAPGRNEDEMGRPFVGAAGKLL 62 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 +++L SI + R + I+ + PP NR+ E+E C P + QIELI P+IL+ +G Sbjct: 63 EELLISIGLRRQDVFITNVVKCRPPNNRDPRPEEIEACLPYLKAQIELIDPEILVPLGRH 122 Query: 197 TKNFFFNNDAQ-KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 + + + GK + +I L T+HP + P +K LK Sbjct: 123 SVGVLLGRIGEISILRVRGKVYEVEVFGAIRKVLPTLHPAAALYNPRLKPLIREDFEKLK 182 Query: 256 KALKN 260 + + Sbjct: 183 SLISS 187 >gi|332157701|ref|YP_004422980.1| hypothetical protein PNA2_0058 [Pyrococcus sp. NA2] gi|331033164|gb|AEC50976.1| hypothetical protein PNA2_0058 [Pyrococcus sp. NA2] Length = 197 Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats. Identities = 44/188 (23%), Positives = 87/188 (46%), Gaps = 3/188 (1%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 + +L+ +++ C L + + + +M +G P ++ G PF GK G +L Sbjct: 8 MKKLEERIKNCKKCPLWELRTNPVPGDGSYNAKVMFVGEAPGYWEDQMGLPFVGKAGKVL 67 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 D++L+SI + R +++I+ I PP NR+ + E++ C P + QI++I PK+++ +G Sbjct: 68 DELLKSIGLSRNEVYITNIVKCRPPNNRDPTEEEIKACSPYLDAQIDIIRPKVIVTLGRF 127 Query: 197 TKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253 + + + + GK T + + HP + P ++K Sbjct: 128 SMGYILRKYGFAVEPISKVHGKVFEARTLFGKLYIIPMYHPAVALYRPQLRKELEEDFKK 187 Query: 254 LKKALKNL 261 LK L +L Sbjct: 188 LKALLASL 195 >gi|312127133|ref|YP_003992007.1| phage SPO1 DNA polymerase-like protein [Caldicellulosiruptor hydrothermalis 108] gi|311777152|gb|ADQ06638.1| phage SPO1 DNA polymerase-related protein [Caldicellulosiruptor hydrothermalis 108] Length = 188 Score = 171 bits (434), Expect = 6e-41, Method: Composition-based stats. Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 6/187 (3%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 + EL++ S C + + + + L+ +G P + ++ GKPF G+ G Sbjct: 3 TWEELENACLSCEKCPISKNRTNVVVGDGNKNAKLVFVGEAPGEEEDKQGKPFVGRAGKF 62 Query: 136 LDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 LD L S+E+ R +I I PP NR + +E + C P + QI+LISPKI++ +G Sbjct: 63 LDLALTSLELSREKDFYICNILKCRPPNNRVPTEVEAQNCLPFLRAQIKLISPKIIVCLG 122 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 + D K Q+ GKW +AT HP L++ P +++ + L ++ Sbjct: 123 ATAMKYILGKDL-KITQDRGKWFE----KGNFLIMATYHPAALLRDPGKREDFYRDLKSV 177 Query: 255 KKALKNL 261 K+ L+ + Sbjct: 178 KERLEKI 184 >gi|54296304|ref|YP_122673.1| hypothetical protein lpp0333 [Legionella pneumophila str. Paris] gi|53750089|emb|CAH11481.1| hypothetical protein lpp0333 [Legionella pneumophila str. Paris] Length = 200 Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats. Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 5/184 (2%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + S C L T T+ + LMIIG P ++ G+PF GK G Sbjct: 17 KHLATLADEVASCVRCSLHKTRTQTVFSRGNPKAKLMIIGEAPGFYEDQKGQPFVGKAGF 76 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 +L+KM++SIE+ ++I+ + PP NR+ + E+ C + RQI+LI P ++L +G Sbjct: 77 LLNKMIRSIEMTENDVYIANVLKCRPPNNRDPALEEISQCSSFLTRQIKLIKPHLILALG 136 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 F + Q P + + HP L++ P KK + + + Sbjct: 137 RFAGQFLLD-KPLPLKQLRNHIHYYNN----TPFIVSYHPAYLLRNPSDKKKAYIDWLAV 191 Query: 255 KKAL 258 K L Sbjct: 192 KSFL 195 >gi|17230510|ref|NP_487058.1| hypothetical protein alr3018 [Nostoc sp. PCC 7120] gi|17132112|dbj|BAB74717.1| alr3018 [Nostoc sp. PCC 7120] Length = 227 Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats. Identities = 47/206 (22%), Positives = 84/206 (40%), Gaps = 11/206 (5%) Query: 62 PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121 P + ++ EL C L ST + +M++G P ++ Sbjct: 23 PKDAKIPIPPGTYTNMTELAQHCNQCQRCELGSTRTHAVVGRGNLKAPIMVVGEAPGQNE 82 Query: 122 NISGKPFSGKTGNMLDKMLQSIE-IMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180 + +G PF G++G +LDK+L S++ ++I+ I+ PP NR + EM C P ++ Sbjct: 83 DETGLPFVGRSGQLLDKILASVDLTTEHDVYIANINKCRPPDNRVPTPNEMAACLPYLLE 142 Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 QI L++PKI+L G D + + G+W + HP L++ Sbjct: 143 QIRLVNPKIILLTGATAVKGLTG-DKRGITKIRGQWIEWA----GHLCMPIFHPSYLLRN 197 Query: 241 PLI-----KKNTWHALITLKKALKNL 261 P K W + ++ + Sbjct: 198 PSKEQGSPKWLMWQDIRAVRTKYDEI 223 >gi|54293266|ref|YP_125681.1| hypothetical protein lpl0314 [Legionella pneumophila str. Lens] gi|53753098|emb|CAH14545.1| hypothetical protein lpl0314 [Legionella pneumophila str. Lens] Length = 200 Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats. Identities = 51/184 (27%), Positives = 84/184 (45%), Gaps = 5/184 (2%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + S C L T T+ + LMIIG P ++ G+PF GK G Sbjct: 17 KHLAALADEVASCVRCSLHKTRTQTVFSRGNPKAKLMIIGEAPGFYEDQKGQPFVGKAGF 76 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 +L+KM++SIE+ ++I+ + PP NR+ + E+ C + RQI+LI P ++L +G Sbjct: 77 LLNKMIRSIEMTENDVYIANVLKCRPPNNRDPALEEISQCSSFLTRQIKLIKPHLILALG 136 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 F + + N + P + + HP L++ P KK + + + Sbjct: 137 RFAGQFLLDKPLPLK-----QLRNHIHYYDNTPFIVSYHPAYLLRNPSDKKKAYIDWLAV 191 Query: 255 KKAL 258 K L Sbjct: 192 KNFL 195 >gi|325967890|ref|YP_004244082.1| uracil-DNA glycosylase [Vulcanisaeta moutnovskia 768-28] gi|323707093|gb|ADY00580.1| predicted Uracil-DNA glycosylase [Vulcanisaeta moutnovskia 768-28] Length = 214 Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats. Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 6/192 (3%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 EL L+ S C L +T + +MIIG P + ++ G+PF G G Sbjct: 11 ADYDELVQLMLSCTKCDLHTTRKRVVPGEGPLNARIMIIGEAPGEKEDEEGRPFVGAAGQ 70 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 +L K+L ++ I R +++I+ I PPGNR+ E+E C+P ++ QI +I P++++ +G Sbjct: 71 LLTKLLSNVGIRREEVYITNIVKCRPPGNRDPEPNEIEACKPYLITQIFMIKPQVIICLG 130 Query: 195 NKTKNFFFNNDAQK------TYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW 248 + GK N+ + L T HP + P ++ Sbjct: 131 RHSAREILVMAGYPEKSVSNISSIRGKVFNVRLGDLNVKVLPTYHPAAALYNPKLRGVIE 190 Query: 249 HALITLKKALKN 260 L ++ + Sbjct: 191 DDLRKIRAIINK 202 >gi|312621954|ref|YP_004023567.1| phage SPO1 DNA polymerase-like protein [Caldicellulosiruptor kronotskyensis 2002] gi|312202421|gb|ADQ45748.1| phage SPO1 DNA polymerase-related protein [Caldicellulosiruptor kronotskyensis 2002] Length = 185 Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats. Identities = 52/187 (27%), Positives = 89/187 (47%), Gaps = 6/187 (3%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 + EL+S C + + + + L+ +G P + ++ GKPF G+ G Sbjct: 3 TWEELESACLLCEKCPISKNRTNVVVGDGNKNAKLVFVGEAPGEEEDKQGKPFVGRAGKF 62 Query: 136 LDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 LD L S+E+ R +I I PP NR + +E + C P + QI+LISPKI++ +G Sbjct: 63 LDLALTSLELSREKDFYICNILKCRPPNNRVPTEVEAQNCLPFLRAQIKLISPKIIVCLG 122 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 + D K Q+ GKW +AT HP L++ P +++ + L ++ Sbjct: 123 ATAMKYILGKDL-KITQDRGKWFE----KGGFWIMATYHPAALLRDPGKREDFYRDLKSV 177 Query: 255 KKALKNL 261 K+ L+ + Sbjct: 178 KERLEKI 184 >gi|295111555|emb|CBL28305.1| uracil-DNA glycosylase, family 4 [Synergistetes bacterium SGP1] Length = 207 Score = 171 bits (433), Expect = 9e-41, Method: Composition-based stats. Identities = 43/196 (21%), Positives = 80/196 (40%), Gaps = 10/196 (5%) Query: 71 AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130 A + +L+ + + C LC +T+ ++++G P ++ G F G Sbjct: 8 AAWEAAWEDLRGRVAACRRCGLCEARTNTVFGQGAVRTPIVMVGEGPGADEDAQGLAFVG 67 Query: 131 KTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 + G +L K+L + I R + I+ + PP NR + EM C + Q+ L+ P+IL Sbjct: 68 RAGQLLTKILSAAGIDRESVFITNVVKCRPPNNRTPTQEEMLKCADFLEAQLLLLRPRIL 127 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KK 245 + +GN + ++ G+W + + HP L++ K Sbjct: 128 VCLGNTPLKWLL-RTSEGITALRGRWFDW----RGVQLFPMFHPSYLLRNDSRQKGSPKD 182 Query: 246 NTWHALITLKKALKNL 261 TW + LK L + Sbjct: 183 LTWQDVQNLKARLDEI 198 >gi|325294639|ref|YP_004281153.1| phage SPO1 DNA polymerase-related protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065087|gb|ADY73094.1| phage SPO1 DNA polymerase-related protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 222 Score = 171 bits (433), Expect = 9e-41, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 6/183 (3%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L +LK + + C LC T + + +LM IG P + +++ G+PF G+ G Sbjct: 38 KELEKLKEEVLNCCKCRLCKTRTNVVFGEGDTTTNLMFIGEAPGEQEDLQGRPFVGRAGQ 97 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 +L + L I R +I I+ + PPGNRN + E++ C P + +QIE+I PK++L +G Sbjct: 98 LLTRFLNLYGISRDKIFITNVVKCRPPGNRNPAQDEIKSCYPFLEKQIEIIKPKVILCLG 157 Query: 195 NKTKNFFFN-NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL-I 252 N + + GK I + T HP L++ + L + Sbjct: 158 AFAARTILNLPEKTPISRIRGK----EQKLGEIVVIPTFHPAYLLRNRKGEPEFQKDLEL 213 Query: 253 TLK 255 L+ Sbjct: 214 ALR 216 >gi|220929817|ref|YP_002506726.1| phage SPO1 DNA polymerase-related protein [Clostridium cellulolyticum H10] gi|220000145|gb|ACL76746.1| phage SPO1 DNA polymerase-related protein [Clostridium cellulolyticum H10] Length = 190 Score = 171 bits (433), Expect = 9e-41, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 84/186 (45%), Gaps = 5/186 (2%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 + +L S + +C L T + + +M IG P + +++ G PF G G + Sbjct: 3 NWEQLNSTCNNCRNCDLAGTRTNIVIGRGNPNAPIMFIGEGPGEQEDLRGLPFVGPAGQL 62 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 LD +L++++ + +I+ + PP NR + E E C P + Q+ LI P+I++ +G+ Sbjct: 63 LDTLLEALKFKPDEYYIANVVKCRPPNNRVPNEEEAEKCLPYLRNQVALIRPRIIVCLGS 122 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 + DA K Q G W + T HP L++ K+ + + +K Sbjct: 123 TAAKYIVARDA-KITQIRGHW----IQRKKFWIMPTFHPAALLRDQSKKELLFKDIKEVK 177 Query: 256 KALKNL 261 K + L Sbjct: 178 KKINQL 183 >gi|145592499|ref|YP_001154501.1| phage SPO1 DNA polymerase-related protein [Pyrobaculum arsenaticum DSM 13514] gi|145284267|gb|ABP51849.1| phage SPO1 DNA polymerase-related protein [Pyrobaculum arsenaticum DSM 13514] Length = 192 Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 82/179 (45%), Gaps = 3/179 (1%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 +L EL ++++ C L T + + +MI+G P S++ G+PF G G + Sbjct: 2 TLEELHEVIKNCTRCPLHKTRRNAVPGEGDIKLGIMIVGEAPGASEDEVGRPFVGAAGQL 61 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 L K L + I R ++I+ + PPGNR + E+E C P +++QI ++ PK ++ +G Sbjct: 62 LTKALAELGIQRGDVYITNVVKCRPPGNRPPAREEVEACLPYLLKQISILKPKRVVALGA 121 Query: 196 KTKNFFFNNDAQKTYQ---NLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 + ++ + GK + T HP +++ P + ++ + Sbjct: 122 VSAKTLLGLVGKEVEKVGDVRGKCYPGKIAGVQLEICVTYHPAAILRNPRLGEDFRRDI 180 >gi|119383192|ref|YP_914248.1| phage SPO1 DNA polymerase-related protein [Paracoccus denitrificans PD1222] gi|119372959|gb|ABL68552.1| phage SPO1 DNA polymerase-related protein [Paracoccus denitrificans PD1222] Length = 271 Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 70/276 (25%), Positives = 118/276 (42%), Gaps = 23/276 (8%) Query: 1 MTSKRI-----LSQEQILTIALFYADSGVYW-VFDEPNNEATYE-----SQRKEKSIDSA 49 MT+ L E L + + A+ G D P + S + A Sbjct: 1 MTADPTYRGFALDAETALALLQWQAELGADEPCLDAPLDRYAMPDRAEPSPAPATAAPQA 60 Query: 50 IQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD 109 P + +R LV +A+++A A +L EL + +F L + + Sbjct: 61 ANPRSPVRDEAEDLVARAEAMATAATTLAELAAAQEAFDGIELKKGARNFCFCDGNPAAR 120 Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI------HISMISPWHPPGN 163 +MIIG P + ++ G+PF G+ G +LD+M +I + R + +I+ + W PPGN Sbjct: 121 IMIIGEAPGEEEDRQGRPFVGRAGQLLDQMFGAIGLSREAVDAERALYITNVLTWRPPGN 180 Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH 223 R E+ + P + R +EL P++L+ +GN N + GKW+ Sbjct: 181 RRPEPAEIAMMLPFLTRHVELAQPQLLVLMGNTPCIAALNQQG--ILKLRGKWTTAF--- 235 Query: 224 SIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 +P L HP L++ PL K+ W L++L L+ Sbjct: 236 -GLPALPMAHPAYLLRTPLAKREAWADLLSLSARLE 270 >gi|331270600|ref|YP_004397092.1| uracil-DNA glycosylase [Clostridium botulinum BKT015925] gi|329127150|gb|AEB77095.1| uracil-DNA glycosylase [Clostridium botulinum BKT015925] Length = 185 Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 6/186 (3%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 +L R+ C+L ++ + LM IG P ++ +G+PF G+ G +L Sbjct: 4 WKDLYKECRACSKCNLGEVKINMVFGEGNPKAKLMFIGEAPGADEDRTGRPFVGRAGQLL 63 Query: 137 DKMLQSIEIMRT-QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 K L ++ + R +I+ I P NRN E C P + Q+ LI PKI++ +G Sbjct: 64 TKGLLALNLHRDKDYYITNICKCRPENNRNPMEDEAYACIPYLRNQVGLIKPKIIVCLGA 123 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 + N K ++ GKW N I + HP +++ K W L +K Sbjct: 124 IAGKYIIN-SGLKITRDRGKWIN----KKGIYIMPIFHPAAILRDDSKKALFWRDLKEIK 178 Query: 256 KALKNL 261 K + Sbjct: 179 KKFDEI 184 >gi|300865821|ref|ZP_07110571.1| phage SPO1 DNA polymerase-related protein [Oscillatoria sp. PCC 6506] gi|300336187|emb|CBN55726.1| phage SPO1 DNA polymerase-related protein [Oscillatoria sp. PCC 6506] Length = 229 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 45/214 (21%), Positives = 86/214 (40%), Gaps = 11/214 (5%) Query: 54 TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113 +++ P + ++ ++ H C L + + +MII Sbjct: 17 ASLQRDSIPNDAKIPIPPGTYETMEQIAEHCNRCHRCELGKNRQNAVIGRGNLQAPIMII 76 Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIE-IMRTQIHISMISPWHPPGNRNLSNIEME 172 G P +++ +G PF G++G +LDK+L+S+ + I ++ PP NR + E + Sbjct: 77 GEAPGQNEDETGLPFVGRSGQLLDKILESVGLSTERDVFICNVNKCRPPDNRTPTPKERD 136 Query: 173 ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATV 232 C+P ++ QI +++P+I+L G Q + G+W +A Sbjct: 137 ACKPYLLEQIRIVNPQIILLTGATALKGLTGEK-QAISKIRGQWIEWE----GRQCMAIF 191 Query: 233 HPQELIQYPLI-----KKNTWHALITLKKALKNL 261 HP L++ P K W + +K L Sbjct: 192 HPSYLLRNPSREPGSPKWLMWQDIQIVKAKFDEL 225 >gi|189219157|ref|YP_001939798.1| Uracil-DNA glycosylase [Methylacidiphilum infernorum V4] gi|189186015|gb|ACD83200.1| Uracil-DNA glycosylase [Methylacidiphilum infernorum V4] Length = 276 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 13/193 (6%) Query: 75 CSLHELKSLLRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 L LK + + +C L S T+ T +LM +G P +++ G+PF G G Sbjct: 74 KELSLLKEKVEACRNCPHLVSFRTQTVFGTGNPYAELMFVGEAPGAEEDLQGEPFVGPAG 133 Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPP------GNRNLSNIEMEICRPIIMRQIELISP 187 +L KM++++ + R Q++I+ + P GNR + EM C P ++ Q++LI+P Sbjct: 134 QLLTKMIRAMGLSREQVYIANVLKCRPDIPKGQKGNRKPTTEEMSTCLPYLLSQLKLINP 193 Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL--IKK 245 K+++ +G K + G+ + + T HP L+ P K+ Sbjct: 194 KVIVALGATAYEGLTGKVGIKISEVRGRCFSFN----GATLIPTYHPSFLLHNPSLTNKR 249 Query: 246 NTWHALITLKKAL 258 W L+T L Sbjct: 250 KVWEDLLTAMGKL 262 >gi|14591260|ref|NP_143337.1| hypothetical protein PH1472 [Pyrococcus horikoshii OT3] gi|3257896|dbj|BAA30579.1| 197aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 197 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 44/195 (22%), Positives = 89/195 (45%), Gaps = 3/195 (1%) Query: 69 SIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128 S+ K + +L+ +R C L + + + +M +G P ++ G PF Sbjct: 3 SVPSKEELMKKLEEKIRKCKKCPLWEVRTNPVPGDGSYDTKIMFVGEAPGYWEDQMGLPF 62 Query: 129 SGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188 GK G +LD++L+ I + R++++I+ I PP NR+ + E++ C P + QI++I PK Sbjct: 63 VGKAGKVLDELLKLIGLKRSEVYITNIVKCRPPNNRDPTEEEIKACAPYLDAQIDIIKPK 122 Query: 189 ILLFIGNKTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK 245 +++ +G + + + + + G+ T I + HP + P +++ Sbjct: 123 VIVTLGRFSTAYIMKKYGFNVEPISKIHGRVFEARTLFGKIYIVPMYHPAVALYRPQLRR 182 Query: 246 NTWHALITLKKALKN 260 LK L + Sbjct: 183 ELEEDFKKLKSLLSS 197 >gi|157363942|ref|YP_001470709.1| phage SPO1 DNA polymerase-related protein [Thermotoga lettingae TMO] gi|157314546|gb|ABV33645.1| phage SPO1 DNA polymerase-related protein [Thermotoga lettingae TMO] Length = 194 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 43/185 (23%), Positives = 79/185 (42%), Gaps = 9/185 (4%) Query: 81 KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML 140 S + C L +T + + +M +G P + ++ +G+PF G+ G +L K+L Sbjct: 11 ASRIEKCTSCPLFNTRTNVVVGEGNLYAPIMFVGEGPGEEEDKTGRPFVGRAGQLLTKIL 70 Query: 141 QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF 200 +S+ I R ++I I PP NR E + C +M QI ++ P I++ +G+ +F Sbjct: 71 ESVNIDREDVYICNIVKCRPPENRVPKAEEQKACGHYLMAQIMIVDPAIIVPLGSTALSF 130 Query: 201 FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWHALITLK 255 F + + GK + HP L++ P K TW + ++ Sbjct: 131 FLGQN-VSITEFRGKELDWKAGK---KLFPMFHPSYLLRNPSKAKGSPKDLTWQDIKKVR 186 Query: 256 KALKN 260 + Sbjct: 187 EFFDQ 191 >gi|255527794|ref|ZP_05394645.1| phage SPO1 DNA polymerase-related protein [Clostridium carboxidivorans P7] gi|255508507|gb|EET84896.1| phage SPO1 DNA polymerase-related protein [Clostridium carboxidivorans P7] Length = 190 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 45/186 (24%), Positives = 77/186 (41%), Gaps = 6/186 (3%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 EL + C L + + + ++ +G P ++ G PF G+ G +L Sbjct: 4 WRELYEECLQCNKCDLGNKRTNMVFGDGNSRGKIVFVGEAPGADEDRIGLPFVGRAGQLL 63 Query: 137 DKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 K L +++++R +I + P NR E E C P + Q+ LI PKI++ +G Sbjct: 64 TKGLTALDLIRENDYYICNVCKCRPDNNRVPYENEAEACLPYLRNQVALIKPKIIVCLGA 123 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 + ND + ++ GKW +AT HP L + K W L ++K Sbjct: 124 TAMKYILGND-FRITRDRGKWIE----RKGCYIIATFHPAALFRDENKKVLFWEDLKSVK 178 Query: 256 KALKNL 261 K + Sbjct: 179 KKYDEI 184 >gi|160931927|ref|ZP_02079320.1| hypothetical protein CLOLEP_00759 [Clostridium leptum DSM 753] gi|156869264|gb|EDO62636.1| hypothetical protein CLOLEP_00759 [Clostridium leptum DSM 753] Length = 193 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 6/188 (3%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 + + L+ H C LC + + E ++M IG P +++++ G+PF G+ G Sbjct: 3 ETWNSLQEACLQCHKCGLCEGRHNVVFGIGVETAEVMFIGEGPGENEDLQGEPFVGRGGQ 62 Query: 135 MLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 +LDKML ++++ R + +I+ I PP NR+ E E C + Q LI PKI++ + Sbjct: 63 LLDKMLAAVDLSREKNIYIANIVKCRPPQNRDPLPEEQEACIDWLRNQTALIRPKIIVCL 122 Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253 G D + T K + + + +AT+HP L++ P K + + Sbjct: 123 GRIAAAKIIKPDIKIT-----KEHGVFFEKNGVVMMATLHPAALLRNPSQKPGAFDDFLK 177 Query: 254 LKKALKNL 261 L++ + L Sbjct: 178 LREKIHEL 185 >gi|254252036|ref|ZP_04945354.1| hypothetical protein BDAG_01247 [Burkholderia dolosa AUO158] gi|124894645|gb|EAY68525.1| hypothetical protein BDAG_01247 [Burkholderia dolosa AUO158] Length = 348 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 55/250 (22%), Positives = 91/250 (36%), Gaps = 23/250 (9%) Query: 29 DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSP-----------------LVQQADSIA 71 D P A + + T ++ Sbjct: 92 DAPRVAANDPADSDRAPVLRDPPASTPQTPPTPDDDFAWFDAAPPSAAVPAAAPRSAETP 151 Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 A L + + C LC +T+ D M+IG P ++++ G+PF G+ Sbjct: 152 VAALDWDALAARVADCTRCRLCEKRTNTVFGVGDRDADWMLIGEAPGENEDKQGEPFVGQ 211 Query: 132 TGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 G +LD MLQS+ + R + I+ + PPGNRN E+ C P + RQ+ L+ PK++ Sbjct: 212 AGKLLDNMLQSLSLRRGDNVFIANVIKCRPPGNRNPEPDEVARCEPYLQRQVALVKPKLI 271 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 + +G DA G+ +P + T HP L++ K W Sbjct: 272 VALGRFAAQTLLKTDASIAS-LRGRVHAYE----GVPVIVTYHPAYLLRSLPDKAKAWAD 326 Query: 251 LITLKKALKN 260 L + +N Sbjct: 327 LCLARDTFRN 336 >gi|312143585|ref|YP_003995031.1| phage SPO1 DNA polymerase-related protein [Halanaerobium sp. 'sapolanicus'] gi|311904236|gb|ADQ14677.1| phage SPO1 DNA polymerase-related protein [Halanaerobium sp. 'sapolanicus'] Length = 210 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 54/184 (29%), Positives = 90/184 (48%), Gaps = 5/184 (2%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 +LK C L + + +M+IG P +++ +PF G+ G ++D Sbjct: 23 QKLKEKALKCTRCQLREGCSNVVMGEGNLDNKIMLIGEGPGATEDRMARPFVGRAGKLMD 82 Query: 138 KMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197 K+LQS+ + R +I+I+ + PP NR E++ C I+ +IELI PK+++ +G+ Sbjct: 83 KILQSVNLKRDEIYITNVVKCRPPDNRVPYKKEVKACSAILKAEIELIEPKVVVTLGSTA 142 Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKA 257 NF N + + GKW I LAT HP L++ +KK +WH +KKA Sbjct: 143 TNFLLNPE-DSITKMRGKW----LKRGDIYFLATFHPAYLLRNENMKKYSWHDFKLIKKA 197 Query: 258 LKNL 261 + Sbjct: 198 ADRI 201 >gi|189485553|ref|YP_001956494.1| uracil-DNA glycosylase [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287512|dbj|BAG14033.1| uracil-DNA glycosylase [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 253 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 15/202 (7%) Query: 68 DSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127 I+ L EL+ + C L L+ + + DL+ +G P ++ GKP Sbjct: 53 AEISSSGEELGELREKVSFCKKCPLGEKRLNAVFGCGSPDADLVFVGEGPGYDEDHIGKP 112 Query: 128 FSGKTGNMLDKMLQSIEIMRTQIHISMISPWH----------PPGNRNLSNIEMEICRPI 177 F G+ G +L K+++++ R ++I+ I H +R + EMEICRP Sbjct: 113 FVGRAGQLLTKIIEAMGQARESVYIANIVKCHAMIDPSNPEKRSNDRPPTLEEMEICRPY 172 Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237 + Q+E+I PKI++ +G + N + + G I + T HP L Sbjct: 173 LDMQLEIIKPKIIVTLGASSTKGLLN-SIESISRIRGSVREY----KGIKLIPTFHPAAL 227 Query: 238 IQYPLIKKNTWHALITLKKALK 259 ++ +KK W + + L Sbjct: 228 LRNQDLKKFVWEDMKKVMHYLD 249 >gi|220931987|ref|YP_002508895.1| Uracil-DNA glycosylase [Halothermothrix orenii H 168] gi|219993297|gb|ACL69900.1| Uracil-DNA glycosylase [Halothermothrix orenii H 168] Length = 210 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 81/185 (43%), Gaps = 8/185 (4%) Query: 80 LKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKM 139 LK C L + + +M +G P ++ GKPF GK G +L K+ Sbjct: 25 LKEKALKCDRCQLRQGCTQVVMGYGPIDRKIMFVGEGPGADEDRLGKPFVGKAGKLLTKI 84 Query: 140 LQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199 L S+ + R ++I+ I PP NR + E E C PI+ +I+LI P +++ +G+ Sbjct: 85 LNSVGLEREDVYITNIVKCRPPNNRQPTRSEAEACSPILKAEIKLIDPLVIVPLGSVALK 144 Query: 200 FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK--- 256 + A + GKW + T HP L++ P +KK W ++K Sbjct: 145 NLVDEKASIM-RTRGKWKKI----GKYYFFPTFHPAFLLRNPKMKKLVWRDFKVIRKAVD 199 Query: 257 ALKNL 261 +K L Sbjct: 200 RIKEL 204 >gi|253680837|ref|ZP_04861640.1| uracil-DNA glycosylase [Clostridium botulinum D str. 1873] gi|253562686|gb|EES92132.1| uracil-DNA glycosylase [Clostridium botulinum D str. 1873] Length = 185 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 6/186 (3%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 +L + C+L + ++ + LM IG P ++ +G+PF G+ G +L Sbjct: 4 WKDLYKKCKDCSKCNLSNGKINMVFGEGNPKAKLMFIGEAPGADEDKTGRPFVGRAGQLL 63 Query: 137 DKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 K L ++ + R +I+ I P NRN E C P + Q+ LI PKI++ +G Sbjct: 64 TKGLLALNLHREQDYYITNICKCRPENNRNPMEHEACACIPYLRNQVALIKPKIIICLGA 123 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 + N++ + ++ GKW I + HP +++ K W L +K Sbjct: 124 IAGKYIINSNL-RITRDRGKWIE----KKGIYIMPIFHPAAILRDNSKKSLFWRDLKEIK 178 Query: 256 KALKNL 261 + + Sbjct: 179 RKFDEI 184 >gi|14520900|ref|NP_126375.1| hypothetical protein PAB0474 [Pyrococcus abyssi GE5] gi|5458117|emb|CAB49606.1| Thermostable uracil-DNA glycosylase [Pyrococcus abyssi GE5] Length = 196 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 44/195 (22%), Positives = 89/195 (45%), Gaps = 3/195 (1%) Query: 70 IAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129 +A K + +L+ +R+ C L + + + +M +G P ++ G PF Sbjct: 1 MASKEELMKKLEEKIRNCKKCPLWQLRTNPVPGDGSYDAKVMFVGEAPGYWEDQQGLPFV 60 Query: 130 GKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189 GK G +LD++L+ I + R +++I+ I PP NR+ + E++ C P + QI++I P+I Sbjct: 61 GKAGKVLDELLKGIGLNRREVYITNIVKCRPPNNRDPTEEEIKACAPYLDAQIDIIRPRI 120 Query: 190 LLFIGNKTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKN 246 ++ +G + + + + GK T + + HP + P ++K Sbjct: 121 IVTLGRFSMGYILRKYGFQVEPISKIHGKVFEARTLFGKVYIVPMYHPAVALYRPQLRKE 180 Query: 247 TWHALITLKKALKNL 261 LK ++ + Sbjct: 181 LEEDFRKLKDLIEKV 195 >gi|114798144|ref|YP_760609.1| uracil-DNA glycosylase [Hyphomonas neptunium ATCC 15444] gi|114738318|gb|ABI76443.1| uracil-DNA glycosylase, family 4 [Hyphomonas neptunium ATCC 15444] Length = 246 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 62/223 (27%), Positives = 108/223 (48%), Gaps = 4/223 (1%) Query: 41 RKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI 100 + ++++ A R + + V++A++IA +L EL + F L ++ +T+ Sbjct: 25 EQAQALEPAPLRKRGARTV-ADWVREAETIAAGCANLDELTAAAGQFSGSPLRASCENTV 83 Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH-ISMISPWH 159 T G L++IG P ++ GKPF GK G +LDKML +I R + I+ ++ W Sbjct: 84 VYDGTPGASLLVIGEGPGAQEDRQGKPFVGKAGQLLDKMLAAIGRNRAENALITNVNYWR 143 Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 PPGNR+ E+ +CRP + R IE+ P++++ G + + G Sbjct: 144 PPGNRSPEADELAVCRPFVDRFIEVSRPRLIVAAGGIPAVSLLGSREGIM-KLRGNEYCY 202 Query: 220 CTPHS-IIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 TP +P + +HP L++ P K W L+ ++K L L Sbjct: 203 TTPGGYRVPLIPMLHPAYLLRRPQDKSRAWRDLLLIEKRLGEL 245 >gi|87302163|ref|ZP_01084988.1| hypothetical protein WH5701_08179 [Synechococcus sp. WH 5701] gi|87283088|gb|EAQ75044.1| hypothetical protein WH5701_08179 [Synechococcus sp. WH 5701] Length = 218 Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 50/206 (24%), Positives = 81/206 (39%), Gaps = 11/206 (5%) Query: 62 PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121 + A + +L +L C L + + LM+IG P + Sbjct: 4 DPGTAGQATALREGALQQLAGGCAECRRCSLADGRQQVVVSRGDPHAALMVIGEGPGAQE 63 Query: 122 NISGKPFSGKTGNMLDKMLQSIEIM-RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180 + SG PF G+ G +LD+ML S+ I +I + PP NR + EM C P +++ Sbjct: 64 DASGSPFVGRAGQLLDRMLASVGIDSNRDAYICNVVKCRPPENRKPTPQEMAACLPWLLQ 123 Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 Q+EL+ P+++L G + G+W L HP L++ Sbjct: 124 QVELVQPQVVLLAGATAVEGVLGIKG-GITRLRGQWRTWQGRW----CLPIFHPSYLLRN 178 Query: 241 PLI-----KKNTWHALITLKKALKNL 261 P K +TW L ++ L L Sbjct: 179 PSREPETPKWHTWQDLKAVRSRLDQL 204 >gi|78066821|ref|YP_369590.1| Phage SPO1 DNA polymerase-related protein [Burkholderia sp. 383] gi|77967566|gb|ABB08946.1| Phage SPO1 DNA polymerase-related protein [Burkholderia sp. 383] Length = 336 Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 53/233 (22%), Positives = 93/233 (39%), Gaps = 20/233 (8%) Query: 25 YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLL 84 P++ A +++ P+ R + +P+ + Sbjct: 107 DMPPAGPDDFAWFDAAPP-----GDPVPVAESRPVGTPVAALDWDALAA---------RV 152 Query: 85 RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIE 144 C LC +T+ D M+IG P ++++ G+PF G+ G +LD MLQS+ Sbjct: 153 SDCTLCRLCEKRTNTVFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLLDNMLQSLS 212 Query: 145 IMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 + R ++I+ + PPGNRN E+ C P + RQ+ L+ PK+++ +G Sbjct: 213 LKRGDNVYIANVIKCRPPGNRNPEPDEVASCEPYLQRQVALVKPKLIVALGRFAAQTLLK 272 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 DA G+ +P + T HP L++ K W L + Sbjct: 273 TDASIAS-LRGRVHAYE----GVPVIVTYHPAYLLRSLQDKSKAWADLCLARD 320 >gi|254293439|ref|YP_003059462.1| phage SPO1 DNA polymerase-related protein [Hirschia baltica ATCC 49814] gi|254041970|gb|ACT58765.1| phage SPO1 DNA polymerase-related protein [Hirschia baltica ATCC 49814] Length = 268 Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 72/264 (27%), Positives = 116/264 (43%), Gaps = 13/264 (4%) Query: 8 SQEQIL--TIALFYADSGVYWVFDEPNNEA-----TYESQRKEKSIDSAIQPITNIRHIH 60 S E++ ++ ++ D+GV D+P + T ++ + R + Sbjct: 4 SPEELALKSLHEWWIDAGV--PPDQPISLKKKTAPTAATKTPAPISKAEKSAPAQPRRLR 61 Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120 + + A +A A ++ +LK + F C L +T+ ST+ D+MII P Sbjct: 62 TDQILAAQKLADHALTIEDLKKSVNDFTGCDLRTTARSTVLCDGNINADMMIICGAPDRE 121 Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIM 179 ++ SG+P +G G +LDKM +I R +I+ + PWH G RN + E ICRP + Sbjct: 122 EDKSGRPAAGANGQLLDKMFAAINFTRQDNLYIASLMPWHMLGERNPDDQEWAICRPFLQ 181 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP--HSIIPTLATVHPQEL 237 RQIEL+SPKI++ IG + N + G+ IP P L Sbjct: 182 RQIELVSPKIIVTIGKMSSQILLN-KTDNIAKLRGQEFQYKQESLSQEIPCFPLFAPSYL 240 Query: 238 IQYPLIKKNTWHALITLKKALKNL 261 P K TW L ++K + L Sbjct: 241 RVRPAEKAKTWKDLQLIRKRAEQL 264 >gi|298492683|ref|YP_003722860.1| phage SPO1 DNA polymerase-like protein ['Nostoc azollae' 0708] gi|298234601|gb|ADI65737.1| phage SPO1 DNA polymerase-related protein ['Nostoc azollae' 0708] Length = 226 Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 49/206 (23%), Positives = 82/206 (39%), Gaps = 11/206 (5%) Query: 62 PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121 P + + ++ EL + C L + +MIIG P S+ Sbjct: 22 PTDAKIPIPSGTYANMPELAQHCNNCRRCGLGDNRTHAVVGRGNLQAKIMIIGEAPGQSE 81 Query: 122 NISGKPFSGKTGNMLDKMLQSIE-IMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180 + +G PF GK+G +L+K+L S+ ++I I+ PP NR + EM C+P ++ Sbjct: 82 DETGLPFVGKSGQLLEKILASVNLSTEEDVYIGNINKCRPPENRVPTAEEMAACKPYLLE 141 Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 QI L+ PKI+L G + Q + G+W + HP L++ Sbjct: 142 QIRLVDPKIILLTGATAVKGITGSK-QGITKIRGQWLESE----GRLCMPIFHPSYLLRN 196 Query: 241 PLI-----KKNTWHALITLKKALKNL 261 P K W + +K + Sbjct: 197 PSREKGSPKWLMWQDIQAVKAKYDEI 222 >gi|167646129|ref|YP_001683792.1| phage SPO1 DNA polymerase-like protein [Caulobacter sp. K31] gi|167348559|gb|ABZ71294.1| phage SPO1 DNA polymerase-related protein [Caulobacter sp. K31] Length = 272 Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 63/264 (23%), Positives = 113/264 (42%), Gaps = 13/264 (4%) Query: 7 LSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPITNIRHIH----- 60 + + ++ F+AD+GV + D+P + + + A + + Sbjct: 5 VDPRAVESLLAFWADAGVEASYADDPIDRLAQGAAMLRARKEPAPVAVAPVVTPVLGRGP 64 Query: 61 --SPLVQQADSIAQKACSLHELKSLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTP 117 + +A ++A L L + + +F C L + + + LMIIG P Sbjct: 65 DLGAAIAEAKALAAACADLPALAAAIAAFDGCPLKTQGARQAVVSRGPADAPLMIIGEAP 124 Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177 +++ G PF G+ G +LD+ML++ + + ++ W PPGNR + E +C P Sbjct: 125 GADEDLQGAPFVGRAGQLLDRMLKAAGL-LDRAFVTNTVFWRPPGNRTPTPQEQAVCAPF 183 Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS--IIPTLATVHPQ 235 + R I L+ PKILL +G + D G+W + +P L T+HP Sbjct: 184 LERAIALVQPKILLLVGGASAKSLLRRDEGILS-LRGRWFEWTSSDGQNELPALPTLHPA 242 Query: 236 ELIQYPLIKKNTWHALITLKKALK 259 L++ P KK W ++ L + L Sbjct: 243 FLLRQPAAKKKAWTDMLMLSERLD 266 >gi|296535656|ref|ZP_06897832.1| uracil-DNA glycosylase [Roseomonas cervicalis ATCC 49957] gi|296264007|gb|EFH10456.1| uracil-DNA glycosylase [Roseomonas cervicalis ATCC 49957] Length = 287 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 60/241 (24%), Positives = 106/241 (43%), Gaps = 15/241 (6%) Query: 25 YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLL 84 P ++ A P +I + L A +A + +++S Sbjct: 46 DVAPGAPMLPDAAAVIAACDALYIAAPPAAHIPLARAALAAAAPDLAALRAVIEQIES-- 103 Query: 85 RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIE 144 L T+ + + A + LM+IG P ++ GKPF G +G +LD+ML SI Sbjct: 104 ------PLRDTATNLVFADGSPESGLMLIGEAPGGDEDRQGKPFVGVSGQLLDRMLASIG 157 Query: 145 IMR------TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTK 198 + R +I+ I PW PPGNR ++ E+ + P+++R I L+ P+ ++ +G Sbjct: 158 LDRGQAAPGQGFYITNILPWRPPGNRTPTDAEIALFLPVVLRHIALVRPRHVVLLGGTAA 217 Query: 199 NFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 + + G+W +L +P L T+HP L++ P K+ W L+ L++ L Sbjct: 218 KALLRAK-EGITRLRGRWHDLPQEAGGLPALPTLHPAYLLRNPAAKREAWADLLMLRRTL 276 Query: 259 K 259 Sbjct: 277 D 277 >gi|227826496|ref|YP_002828275.1| phage SPO1 DNA polymerase-related protein [Sulfolobus islandicus M.14.25] gi|229583658|ref|YP_002842159.1| phage SPO1 DNA polymerase-related protein [Sulfolobus islandicus M.16.27] gi|227458291|gb|ACP36977.1| phage SPO1 DNA polymerase-related protein [Sulfolobus islandicus M.14.25] gi|228018707|gb|ACP54114.1| phage SPO1 DNA polymerase-related protein [Sulfolobus islandicus M.16.27] Length = 216 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 4/190 (2%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 +L + +R C L + + ++M IG P ++++I GKPF G G Sbjct: 2 DTLDLIAEEVRKCQKCRLWKYRKNAVPGEGNNKAEIMFIGEAPGENEDIEGKPFVGAAGK 61 Query: 135 MLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 +L +++ + + + R + I+ + PP NR+ E+ C P + RQIELI P+I++ + Sbjct: 62 LLTRLINEVLGLSRDDVFITNLVKCRPPNNRDPEEDEIIACSPYLHRQIELIRPRIIITL 121 Query: 194 GNKTKNFFFNNDAQKT---YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 G + ++ F K + GK+ I T HP + P I+K Sbjct: 122 GRHSTSYLFQIMNIKMESIGKVRGKFYTWNEYGYKILVFPTYHPAAALYNPPIRKILEED 181 Query: 251 LITLKKALKN 260 +K+AL + Sbjct: 182 FRKVKEALSS 191 >gi|227829105|ref|YP_002830884.1| phage SPO1 DNA polymerase-related protein [Sulfolobus islandicus L.S.2.15] gi|229577905|ref|YP_002836303.1| phage SPO1 DNA polymerase-related protein [Sulfolobus islandicus Y.G.57.14] gi|229580806|ref|YP_002839205.1| phage SPO1 DNA polymerase-related protein [Sulfolobus islandicus Y.N.15.51] gi|238618564|ref|YP_002913389.1| phage SPO1 DNA polymerase-related protein [Sulfolobus islandicus M.16.4] gi|284996491|ref|YP_003418258.1| phage SPO1 DNA polymerase-related protein [Sulfolobus islandicus L.D.8.5] gi|227455552|gb|ACP34239.1| phage SPO1 DNA polymerase-related protein [Sulfolobus islandicus L.S.2.15] gi|228008619|gb|ACP44381.1| phage SPO1 DNA polymerase-related protein [Sulfolobus islandicus Y.G.57.14] gi|228011522|gb|ACP47283.1| phage SPO1 DNA polymerase-related protein [Sulfolobus islandicus Y.N.15.51] gi|238379633|gb|ACR40721.1| phage SPO1 DNA polymerase-related protein [Sulfolobus islandicus M.16.4] gi|284444386|gb|ADB85888.1| phage SPO1 DNA polymerase-related protein [Sulfolobus islandicus L.D.8.5] gi|323473573|gb|ADX84179.1| phage SPO1 DNA polymerase-related protein [Sulfolobus islandicus REY15A] gi|323476220|gb|ADX81458.1| phage SPO1 DNA polymerase-related protein [Sulfolobus islandicus HVE10/4] Length = 216 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 4/190 (2%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 +L + +R C L + + ++M IG P ++++I GKPF G G Sbjct: 2 DTLDLIAEEVRKCQKCRLWKYRKNAVPGEGNNKAEIMFIGEAPGENEDIEGKPFVGAAGK 61 Query: 135 MLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 +L +++ + + + R + I+ + PP NR+ E+ C P + RQIELI P+I++ + Sbjct: 62 LLTRLINEVLGLSRDDVFITNLVKCRPPNNRDPEEDEIIACSPYLHRQIELIRPRIIITL 121 Query: 194 GNKTKNFFFNNDAQKT---YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 G + ++ F K + GK+ I T HP + P I+K Sbjct: 122 GRHSTSYLFQIMNIKMESIGKVRGKFYTWNEYGYKILVFPTYHPAAALYNPPIRKILEED 181 Query: 251 LITLKKALKN 260 +K+AL + Sbjct: 182 FRKVKEALSS 191 >gi|254495599|ref|ZP_05108521.1| bacteriophage related DNA polymerase [Legionella drancourtii LLAP12] gi|254355169|gb|EET13782.1| bacteriophage related DNA polymerase [Legionella drancourtii LLAP12] Length = 198 Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 54/184 (29%), Positives = 83/184 (45%), Gaps = 5/184 (2%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L L + + C L T T+ + LMIIG P ++ G PF GK G +L Sbjct: 16 LSALAKEVAACTRCPLHQTRKQTVFFRGSPQAKLMIIGEAPGFYEDQQGLPFVGKAGGLL 75 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++MLQS+E+ +I+ + PP NR+ E+ C + RQIEL+ P ++L +G Sbjct: 76 NQMLQSVELFEQDFYIANVLKCRPPNNRDPQAAEIRQCSAYLSRQIELLQPSLILALGRF 135 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 F N Q P + + HP L++ P KK T+ L+ +KK Sbjct: 136 AGQFLLN-KPLALKQLRNNVHYY----KNTPFIVSYHPAYLLRKPADKKKTYLDLLAVKK 190 Query: 257 ALKN 260 L+ Sbjct: 191 FLQQ 194 >gi|74317741|ref|YP_315481.1| putative phage DNA polymerase [Thiobacillus denitrificans ATCC 25259] gi|74057236|gb|AAZ97676.1| putative phage DNA polymerase [Thiobacillus denitrificans ATCC 25259] Length = 213 Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats. Identities = 53/205 (25%), Positives = 86/205 (41%), Gaps = 6/205 (2%) Query: 58 HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117 L A C +L + C L +T + D +++G P Sbjct: 14 APAWRLRDTASEARAPVCGWEQLSDAVAHCTRCRLAATRTQGVLGVGDREADWLVVGEAP 73 Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRP 176 ++ G+PF GK G +LD ML SI I R ++I+ + PPGNR+ E+ C P Sbjct: 74 GADEDRLGEPFVGKAGKLLDAMLASIGIARGDNVYITNVLKSRPPGNRDPEADEVAACMP 133 Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236 ++ QI+L+ PK++L +G DA G+ + IP + T HP Sbjct: 134 YLLAQIDLVKPKLILALGRFAAQSLLATDAALGS-LRGRVHSFQN----IPLVVTYHPAY 188 Query: 237 LIQYPLIKKNTWHALITLKKALKNL 261 L++ K W L ++ ++ L Sbjct: 189 LLRNLPDKARAWEDLCLARRTIQRL 213 >gi|315426239|dbj|BAJ47882.1| DNA polymerase bacteriophage-type [Candidatus Caldiarchaeum subterraneum] gi|315427880|dbj|BAJ49472.1| DNA polymerase bacteriophage-type [Candidatus Caldiarchaeum subterraneum] Length = 196 Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 80/186 (43%), Gaps = 7/186 (3%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L + +R+ C L + + +LM IG P + +++ G+PF G++G +L Sbjct: 5 LDAIAEEVRACRLCPLWRGRRNAVPGEGNPRAELMFIGEGPGEEEDLQGRPFVGRSGRLL 64 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP-IIMRQIELISPKILLFIGN 195 + L+ I R + I+ + PP NR + E + C + RQIE ++P++++ +G+ Sbjct: 65 TEALEKAGIRREDVFITNVVKCRPPENREPTPEERQTCTNKYLFRQIETVNPRLIVLLGS 124 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 + GK T HP + P ++N + + + Sbjct: 125 VAVQTLLGISSV--TAVRGKAFE----KMGRRFFCTYHPAAALYNPGNRENFFSDIKKAR 178 Query: 256 KALKNL 261 + L++L Sbjct: 179 ELLESL 184 >gi|146297378|ref|YP_001181149.1| phage SPO1 DNA polymerase-related protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410954|gb|ABP67958.1| phage SPO1 DNA polymerase-related protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 187 Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 6/187 (3%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 + EL+ S C + + + + LM IG P + ++ GKPF G+ G + Sbjct: 3 TWEELERSCLSCTKCPISKDRTNVVIGDGNKNAKLMFIGEAPGEEEDKQGKPFVGRAGKL 62 Query: 136 LDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 LD L ++E+ R +I I PP NR + E + C P + Q++L+ PKI++ +G Sbjct: 63 LDLALDALELSRENDFYICNILKCRPPNNRVPTEYEAQNCLPYLRAQVKLVQPKIIVCLG 122 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 + + K Q+ GKW +AT HP L++ P +++ + L ++ Sbjct: 123 ATAMKYILGRNL-KITQDRGKWF----QKGEFHIMATYHPAALLRDPSKREDFYRDLKSV 177 Query: 255 KKALKNL 261 K+ LK + Sbjct: 178 KEKLKEM 184 >gi|332709104|ref|ZP_08429072.1| uracil-DNA glycosylase, family 4 [Lyngbya majuscula 3L] gi|332352110|gb|EGJ31682.1| uracil-DNA glycosylase, family 4 [Lyngbya majuscula 3L] Length = 231 Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats. Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 10/219 (4%) Query: 49 AIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQ 108 N++ P + A ++ L +S C L +T + Sbjct: 16 TPSKPNNVQRDLIPTDAKIPIPAGTYDTMESLTEHCQSCQRCELGATRTKAVIGRGNPKA 75 Query: 109 DLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM-RTQIHISMISPWHPPGNRNLS 167 +MIIG P ++ +G PF G+ G +L+K+L S++I ++I + PPGNR + Sbjct: 76 LIMIIGEGPGKQEDETGMPFVGRAGKLLEKILASVKIDTEQDVYICNMVKCRPPGNRTPT 135 Query: 168 NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227 E+E C+P ++ QI L+ P+I+LF G N Q + G W Sbjct: 136 PNEIEACKPYLLEQIRLVEPQIILFTGATAVKGLTGNK-QGITKIRGTWMEWEGHK---W 191 Query: 228 TLATVHPQELIQYP-----LIKKNTWHALITLKKALKNL 261 + +HP L++ P K W + ++ L + Sbjct: 192 CMPILHPAYLLRNPKRDPGSPKWMMWQDIQKVRAKLDEI 230 >gi|312880146|ref|ZP_07739946.1| phage SPO1 DNA polymerase-related protein [Aminomonas paucivorans DSM 12260] gi|310783437|gb|EFQ23835.1| phage SPO1 DNA polymerase-related protein [Aminomonas paucivorans DSM 12260] Length = 228 Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats. Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 10/190 (5%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L E + + C L T ++ L+ +G P ++ G PF G+ G +L Sbjct: 30 LEEARHRVERCLRCPLGKTRNKSVFGEGNLWGKLLFVGEGPGADEDEQGMPFVGRAGQLL 89 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++LQ+ I R ++I+ + PPGNR + EM C + QI L P +L+ +GN Sbjct: 90 TQILQAAGIRREDVYITNVVKCRPPGNRVPTFEEMMACDEYLQTQIALGRPSLLVLLGNT 149 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWHAL 251 + + + G+W + + L HP L++YP K TW + Sbjct: 150 PTKWILK-TTEGISKLRGRWFSW----KGMSVLPMFHPSYLLRYPSSTEGSPKHLTWLDI 204 Query: 252 ITLKKALKNL 261 +K+ + Sbjct: 205 QEVKRKWDEV 214 >gi|187777334|ref|ZP_02993807.1| hypothetical protein CLOSPO_00886 [Clostridium sporogenes ATCC 15579] gi|187774262|gb|EDU38064.1| hypothetical protein CLOSPO_00886 [Clostridium sporogenes ATCC 15579] Length = 193 Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats. Identities = 45/186 (24%), Positives = 76/186 (40%), Gaps = 6/186 (3%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 +L + + + C L + + ++ IG P ++ +GKPF GK G +L Sbjct: 7 WSQLYNECINCNKCPLVKDRTNMVFGEGYINAPIIFIGEAPGADEDRTGKPFVGKAGQLL 66 Query: 137 DKMLQSIEIMRT-QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 K L ++E R +I + P NR E C P + Q+ L+ PKI++ +G Sbjct: 67 TKALLALEFKRDEHYYICNVCKCRPENNRTPKEEEARECLPFLRNQVALVKPKIIVCLGA 126 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 + + + ++ GKW +AT HP L + KK W L ++K Sbjct: 127 TPLKYIIG-EQFRITRDRGKWIE----RKGYHIMATFHPAALFRDESKKKLFWQDLKSIK 181 Query: 256 KALKNL 261 L Sbjct: 182 VKYDEL 187 >gi|308751050|gb|ADO44533.1| phage SPO1 DNA polymerase-related protein [Hydrogenobacter thermophilus TK-6] Length = 219 Score = 168 bits (425), Expect = 7e-40, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 2/191 (1%) Query: 68 DSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127 S K LHEL L C L S + ++ +G P + ++ KP Sbjct: 27 KSKPDKRRMLHELYETLSKEKKCILYEGSSGYVFGDGNPDSAVVFVGEAPGEEEDKQKKP 86 Query: 128 FSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP 187 F GK G L+ LQ + + R ++I+ + PPGNR + EM C P + ++IE+I P Sbjct: 87 FVGKAGKYLNAKLQEVGMRREDVYITNVVKSRPPGNRKPTKEEMLSCLPYLRKEIEIIKP 146 Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247 K+++ +G+ A + G+ I L T HP +++ P + Sbjct: 147 KLIVCLGSTALEGLLG-KALPITKYRGQVFEYPYS-RNIKVLLTYHPAYVLRNPSADREF 204 Query: 248 WHALITLKKAL 258 + +K L Sbjct: 205 MEDMKKVKALL 215 >gi|158337182|ref|YP_001518357.1| DNA polymerase bacteriophage-type [Acaryochloris marina MBIC11017] gi|158307423|gb|ABW29040.1| DNA polymerase bacteriophage-type, putative [Acaryochloris marina MBIC11017] Length = 232 Score = 168 bits (425), Expect = 7e-40, Method: Composition-based stats. Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 14/221 (6%) Query: 47 DSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTE 106 ++ + +T+ SP V +L EL + + C L + + + Sbjct: 16 ETVSEAVTHEEISASPQVPIPKGFY---QNLQELTTHCQQCQRCDLAPSRTHVVVSRGNP 72 Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM-RTQIHISMISPWHPPGNRN 165 ++IIG P ++ +G PF G+ G +LDK+L S+++ + ++I I PPGNR Sbjct: 73 EAPILIIGEGPGQHEDETGLPFVGRAGQLLDKILASVKLDSQNDVYICNIVKCRPPGNRT 132 Query: 166 LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI 225 + E C+P ++ QI L++PKI+L G D + + G+W Sbjct: 133 PTPDESAACKPYLLEQIRLVNPKIILLTGATAVRGLTG-DKRGITKIRGQWLAWQN---- 187 Query: 226 IPTLATVHPQELIQYPL-----IKKNTWHALITLKKALKNL 261 + +HP L++ P K W + ++ L L Sbjct: 188 YLCMPILHPAYLLRNPSPEPGKPKWLMWQDIQAVRAKLDEL 228 >gi|318041681|ref|ZP_07973637.1| hypothetical protein SCB01_08212 [Synechococcus sp. CB0101] Length = 214 Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats. Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 8/207 (3%) Query: 62 PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121 P S A+ L ++ + C L + + + LM+IG P + Sbjct: 5 PPQASRLSAAELEQELDQVAAACDGCRRCGLGHSRTQVVVSRGNPRAPLMVIGEGPGAQE 64 Query: 122 NISGKPFSGKTGNMLDKMLQSIEIM-RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180 + GKPF G++G +LD+ML+S+ I ++ I PP NR + +EM CRP + + Sbjct: 65 DEQGKPFVGRSGQLLDRMLESVGIDSNRDAYVCNIVKCRPPENRKPTGLEMAACRPWLDQ 124 Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH-SIIPTLATVHPQELIQ 239 QI+L+ P ++L G + G+W + +HP L++ Sbjct: 125 QIQLVDPPVILLAGATAVEGLLGIKG-GITKLRGQWRKGEGGSLEGRWLMPILHPSYLLR 183 Query: 240 YPLI-----KKNTWHALITLKKALKNL 261 K TWH L +++ L L Sbjct: 184 NASKERGSPKWLTWHDLQDVQRRLAQL 210 >gi|319943628|ref|ZP_08017909.1| arginine biosynthesis ArgJ [Lautropia mirabilis ATCC 51599] gi|319742861|gb|EFV95267.1| arginine biosynthesis ArgJ [Lautropia mirabilis ATCC 51599] Length = 409 Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats. Identities = 45/213 (21%), Positives = 79/213 (37%), Gaps = 4/213 (1%) Query: 50 IQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQ- 108 +P+ + A L+ + C L T +T+ Q Sbjct: 191 PEPMLPAEPEPESAPLSHPDL-PPAQRWIRLREDVDGCRRCRLAETRTNTVFGRGRPQQA 249 Query: 109 DLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRT-QIHISMISPWHPPGNRNLS 167 M+IG P ++ G+ F G+ G +LD ML + I + + I+ + PP NRN Sbjct: 250 RWMLIGEGPGAEEDKQGEAFVGQAGKLLDAMLDAAGIDPSADVFIANVLKCRPPNNRNPE 309 Query: 168 NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227 E+ C + QI L+ P +L +G + + + K ++ +P Sbjct: 310 PDEVAACEGYLYEQIRLVQPDCILLLGRFAAQSVL-HSELQIGRLRNKLHHITLDGRQVP 368 Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 + T HP L++ K W L A++ Sbjct: 369 VVVTYHPAYLLRNQRDKLKGWEDLCLALSAMEA 401 >gi|315426164|dbj|BAJ47808.1| DNA polymerase bacteriophage-type [Candidatus Caldiarchaeum subterraneum] Length = 200 Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 79/186 (42%), Gaps = 7/186 (3%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L + +R+ C L + + +LM IG P + +++ G+PF G++G +L Sbjct: 9 LDAIAEEVRACRLCPLWRGRRNAVPGEGNPRAELMFIGEGPGEEEDLQGRPFVGRSGRLL 68 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP-IIMRQIELISPKILLFIGN 195 + L+ I R + I+ + PP NR + E + C + RQIE ++P++++ +G+ Sbjct: 69 TEALEKAGIRREDVFITNVVKCRPPENREPTPEERQTCTNKYLFRQIEAVNPRLIVLLGS 128 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 + GK T HP + P ++ + + + Sbjct: 129 VAVQTLLGISSV--TAVRGKAFE----KMGRRFFCTYHPAAALYNPGNRETFFSDIKKAR 182 Query: 256 KALKNL 261 + L++L Sbjct: 183 ELLESL 188 >gi|119356182|ref|YP_910826.1| phage SPO1 DNA polymerase-related protein [Chlorobium phaeobacteroides DSM 266] gi|119353531|gb|ABL64402.1| phage SPO1 DNA polymerase-related protein [Chlorobium phaeobacteroides DSM 266] Length = 223 Score = 168 bits (424), Expect = 9e-40, Method: Composition-based stats. Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 5/205 (2%) Query: 57 RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYT 116 L L L ++S C L ++ + + L++IG Sbjct: 7 SDHDDTLPSVQSEAGAPFRDLIGLSLAVKSCTKCRLSASRKNVVFGEGDPRAALVVIGEA 66 Query: 117 PSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP 176 P ++ G+PF G++G +LDK+LQ+++ R ++ I I PP NRN E+E C P Sbjct: 67 PGADEDSQGRPFVGRSGQLLDKILQAVQFKREEVFICNILKCRPPQNRNPLADEIECCMP 126 Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236 ++ Q+EL++PK++L +G N ++ G+ + T HP Sbjct: 127 WLLLQLELLNPKLILLLGKVAANTILQ-NSLSMGAMRGRI----VKWKAYDCMVTYHPAA 181 Query: 237 LIQYPLIKKNTWHALITLKKALKNL 261 L++ P KK W + +++ L Sbjct: 182 LLRNPGWKKACWEDVQMMRQHYDKL 206 >gi|154499968|ref|ZP_02038006.1| hypothetical protein BACCAP_03625 [Bacteroides capillosus ATCC 29799] gi|150271566|gb|EDM98823.1| hypothetical protein BACCAP_03625 [Bacteroides capillosus ATCC 29799] Length = 188 Score = 168 bits (424), Expect = 9e-40, Method: Composition-based stats. Identities = 48/187 (25%), Positives = 90/187 (48%), Gaps = 5/187 (2%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 + L++ C L T + + T ++M IG P + +++ G+PF G+ G Sbjct: 2 KNWEALQAECMDCRKCALAETRHNVVFGTGNPNAEVMFIGEGPGEQEDLKGEPFVGRAGK 61 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 +LD ML+ I++ R++I+I+ + PP NR+ N+E E C + Q+ +I PKI++ +G Sbjct: 62 LLDDMLEIIDLDRSKIYITNMVKCRPPQNRDPLNVEQEACIGYLRNQVAIIRPKIIVCLG 121 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 D K + G+W + + A HP L++ P + + L +L Sbjct: 122 RIAAMKLIKED-FKITKEHGQWVE----KAGVQMTAMYHPAALLRNPGWRPAAFEDLKSL 176 Query: 255 KKALKNL 261 + +K + Sbjct: 177 QAKIKEI 183 >gi|327400521|ref|YP_004341360.1| phage SPO1 DNA polymerase-like protein [Archaeoglobus veneficus SNP6] gi|327316029|gb|AEA46645.1| phage SPO1 DNA polymerase-related protein [Archaeoglobus veneficus SNP6] Length = 202 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 41/189 (21%), Positives = 89/189 (47%), Gaps = 3/189 (1%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 SL ++++ +RS C+L T + + +++ +G P ++ G+PF G G Sbjct: 2 ESLEDIEAEIRSCKKCNLWKTKTNYVPGEGNPKAEVVFVGEAPGREEDRQGRPFVGNAGK 61 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 +L +M++ + + R + I I PP NR+ E+E C P ++RQ+++I P I++ +G Sbjct: 62 ILTEMIEKLGLRREDVFIGNILKCRPPNNRDPLPEEIEACSPYLIRQLDVIKPSIIVCLG 121 Query: 195 NKTKNFF---FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 + +F F + + + G+ + + +A HP ++ P +++ Sbjct: 122 RHSASFLFNFFGIEFRGISKERGRVKEVERWGKKVRLIAIYHPAAILYRPQLREMFEEDF 181 Query: 252 ITLKKALKN 260 + L+ Sbjct: 182 AVIAGLLRE 190 >gi|300853380|ref|YP_003778364.1| putative phage related DNA polymerase [Clostridium ljungdahlii DSM 13528] gi|300433495|gb|ADK13262.1| predicted phage related DNA polymerase [Clostridium ljungdahlii DSM 13528] Length = 192 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 43/186 (23%), Positives = 75/186 (40%), Gaps = 6/186 (3%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 EL S C L + + +M IG P ++ +G PF G+ G +L Sbjct: 4 WKELYEECLSCSKCSLGDNRTNMVFGDGNPKAHIMFIGEAPGADEDRTGIPFVGRAGQLL 63 Query: 137 DKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 K L ++++ R +I I P NR E + C P + Q+ L+ PKI++ +G Sbjct: 64 TKALLALDLHRERDYYICNICKCRPKNNRTPYEEEEKACIPYLRNQVALVRPKIIVCLGA 123 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 + + ++ GKW AT HP +++ K W L ++K Sbjct: 124 TAMGCILGKEW-RITRDRGKWIE----RKGFYMTATFHPSAVLRDANKKAAFWEDLKSIK 178 Query: 256 KALKNL 261 + + + Sbjct: 179 EKNEEI 184 >gi|261367056|ref|ZP_05979939.1| uracil-DNA glycosylase [Subdoligranulum variabile DSM 15176] gi|282571175|gb|EFB76710.1| uracil-DNA glycosylase [Subdoligranulum variabile DSM 15176] Length = 188 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 87/187 (46%), Gaps = 6/187 (3%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 L L+ + C LC + + +++ +G P +++ G+PF G++G + Sbjct: 2 DLQTLQQECLACRRCGLCESRTHVVFGQGVPNAEVLFVGEGPGANEDAQGQPFVGRSGQL 61 Query: 136 LDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 LD L+++++ R + +I+ I PP NR+ E C P + +Q +L+ PKI++ +G Sbjct: 62 LDHYLEAVDLNREKNVYIANIVKCRPPQNRDPLPEESAACLPWLRQQFQLLRPKIIVCLG 121 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 ++ GK+ + +AT HP L++YP+ K + + L Sbjct: 122 RIAAQQLI-EPGFSVTRDHGKFFD----KHGTLFMATYHPAALLRYPVNKPAVFGDFVAL 176 Query: 255 KKALKNL 261 ++ + + Sbjct: 177 REKIAQV 183 >gi|195953859|ref|YP_002122149.1| phage SPO1 DNA polymerase-related protein [Hydrogenobaculum sp. Y04AAS1] gi|195933471|gb|ACG58171.1| phage SPO1 DNA polymerase-related protein [Hydrogenobaculum sp. Y04AAS1] Length = 245 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 42/192 (21%), Positives = 76/192 (39%), Gaps = 5/192 (2%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L + C L + +M +G P +++ GKPF GK G Sbjct: 53 RQLKAFYETCKDCKKCKLSEQRTQVVFGDGNPDTGIMFVGEGPGADEDVEGKPFVGKAGK 112 Query: 135 MLDKMLQSIEIMRTQ-IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 +L + L+ + ++R + +I+ + PPGNR EM C I+ +++LI PK+++ + Sbjct: 113 LLTQELERVGLLRQRDYYITNVVKCRPPGNRTPEEQEMITCSYILKEEMKLIKPKLVIAL 172 Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTP----HSIIPTLATVHPQELIQYPLIKKNTWH 249 G + G + + T HP L++ P KN Sbjct: 173 GRTAAVGLSGIKQISPTKVRGSFISANLKSPVLAPGTKIFVTYHPSYLLRNPNELKNFRE 232 Query: 250 ALITLKKALKNL 261 +I +K + +L Sbjct: 233 DIIKIKSLVDSL 244 >gi|257094232|ref|YP_003167873.1| phage SPO1 DNA polymerase-like protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046756|gb|ACV35944.1| phage SPO1 DNA polymerase-related protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 287 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 49/238 (20%), Positives = 87/238 (36%), Gaps = 5/238 (2%) Query: 26 WVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLR 85 + D ++ + + + + + EL + Sbjct: 41 VLADATRAGLHQQAVEQARPLPGGASADVPSAARTERTERTERAEQIARLGWDELAESVA 100 Query: 86 SFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI 145 + C LC + G D + IG P ++ G+PF G G +LD ML +I++ Sbjct: 101 ACRACGLCEQRRQAVLGVGDHGADWLFIGEGPGAEEDARGEPFVGPAGKLLDAMLAAIDL 160 Query: 146 MR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204 R ++I+ PP NR +EM C P + RQIELI P++++ +G + + Sbjct: 161 RRGADVYIANAVKCRPPSNRTPEAVEMVACAPYLRRQIELIQPRLIVLLGRAAAHALLGD 220 Query: 205 DAQKTYQNLGKWSNLCTPHSI---IPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 G+ IP + T HP L++ K W L + ++ Sbjct: 221 VGSLAS-LRGRPLEYREGAGGRVAIPVVVTYHPAYLLRTLPDKAKAWEDLCRARTVMR 277 >gi|57642078|ref|YP_184556.1| Uracil-DNA glycosylase [Thermococcus kodakarensis KOD1] gi|57160402|dbj|BAD86332.1| Uracil-DNA glycosylase [Thermococcus kodakarensis KOD1] Length = 196 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 45/188 (23%), Positives = 90/188 (47%), Gaps = 3/188 (1%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 + +L+ +R+ C L + + + + +M +G P ++ G PF G+ G +L Sbjct: 9 MKKLEEKIRNCQKCPLGTLRTNAVPGAGSYDAKVMFVGEAPGYWEDQKGLPFVGRAGKLL 68 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 D++L I + R +++I+ I PP NR+ + E++ C P + RQI++I PK+++ +G Sbjct: 69 DELLAEIGLSRDEVYITNIVKCRPPENRDPTEEEIKACSPYLDRQIDIIRPKVIIPLGRY 128 Query: 197 TKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253 + N+ + + + GK T I + HP + P +++ Sbjct: 129 SMNYLLRKFGFEPEPISRIHGKTFEAHTLFGKIIIMPMYHPAAALYKPPLREELRKDFQK 188 Query: 254 LKKALKNL 261 LK L+N+ Sbjct: 189 LKSLLENI 196 >gi|153956358|ref|YP_001397123.1| Phage-related DNA polymerase [Clostridium kluyveri DSM 555] gi|146349216|gb|EDK35752.1| Phage-related DNA polymerase [Clostridium kluyveri DSM 555] Length = 192 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 6/186 (3%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 EL + + C L + ++ + DL+ IG P ++ G PF GK G +L Sbjct: 4 WRELYEQCINCNKCGLGDSRINMVFGDGNPKADLVFIGEAPGADEDRIGLPFVGKAGKLL 63 Query: 137 DKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 K L+S+++ R +I I P NR E + C P + Q+ LI PKI++ +G Sbjct: 64 TKALESLDLYRKKDYYICNICKCRPKNNRTPYEDEEKACLPYLRNQVALIKPKIIVCLGA 123 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 D + ++ GKW AT HP +++ K W L ++ Sbjct: 124 TAMGCILGKDW-RITRDRGKWVE----RKGFYITATFHPSAILRDENKKPLFWQDLKNIR 178 Query: 256 KALKNL 261 + + + Sbjct: 179 RKYEEI 184 >gi|156937095|ref|YP_001434891.1| phage SPO1 DNA polymerase-related protein [Ignicoccus hospitalis KIN4/I] gi|156566079|gb|ABU81484.1| phage SPO1 DNA polymerase-related protein [Ignicoccus hospitalis KIN4/I] Length = 191 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 76/177 (42%), Gaps = 3/177 (1%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L E+ ++ C LC + + EG +++ +G P ++ G+PF G+ G +L Sbjct: 3 LREVAEKVKGCCKCDLCKVRKNPVPGEGDEGAEVVFVGEAPGKEEDEEGRPFVGRAGRLL 62 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 + I + +I+ + PPGNR + E+E C+P ++ ++ I PK+++ +G Sbjct: 63 RSTISQIGFK--KYYITNVVKCRPPGNRTPTEEEVEACKPYLIEELNCIRPKLVVALGRT 120 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253 GK + + L T HP +++ P +K+ L Sbjct: 121 AAEALLGLKGPLKG-VRGKVLVASAGGARVKVLVTYHPAAVLRNPKLKEQFVSDLKK 176 >gi|188997005|ref|YP_001931256.1| phage SPO1 DNA polymerase-related protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188932072|gb|ACD66702.1| phage SPO1 DNA polymerase-related protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 217 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 44/195 (22%), Positives = 86/195 (44%), Gaps = 5/195 (2%) Query: 60 HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSD 119 L Q++ + K L+++ ++ C L + + + +M IG P + Sbjct: 22 KPILNQKSSNQIDKIEELNKIYEEIKVCTKCDLHKSRTNPVLGEGNINAKIMFIGEAPGE 81 Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIM 179 ++ G+PF G+ G +L K +++ +R +++I+ I+ PP NR + E E C P ++ Sbjct: 82 EEDKQGRPFVGRAGKLLTKCIENAGHIREEVYIANINKCRPPNNRTPTIEEQEACIPFLL 141 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 RQIE+I+PK+L +G F K + G T HP +++ Sbjct: 142 RQIEIINPKVLCLLGATAYRGIFK-KEAKITKERGSILEFMGK----KVYITYHPAYVLR 196 Query: 240 YPLIKKNTWHALITL 254 P ++ + + Sbjct: 197 NPKEEETFCQDIKNV 211 >gi|219856673|ref|YP_002473795.1| hypothetical protein CKR_3330 [Clostridium kluyveri NBRC 12016] gi|219570397|dbj|BAH08381.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 196 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 6/186 (3%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 EL + + C L + ++ + DL+ IG P ++ G PF GK G +L Sbjct: 8 WRELYEQCINCNKCGLGDSRINMVFGDGNPKADLVFIGEAPGADEDRIGLPFVGKAGKLL 67 Query: 137 DKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 K L+S+++ R +I I P NR E + C P + Q+ LI PKI++ +G Sbjct: 68 TKALESLDLYRKKDYYICNICKCRPKNNRTPYEDEEKACLPYLRNQVALIKPKIIVCLGA 127 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 D + ++ GKW AT HP +++ K W L ++ Sbjct: 128 TAMGCILGKDW-RITRDRGKWVE----RKGFYITATFHPSAILRDENKKPLFWQDLKNIR 182 Query: 256 KALKNL 261 + + + Sbjct: 183 RKYEEI 188 >gi|225849400|ref|YP_002729564.1| uracil-DNA glycosylase [Sulfurihydrogenibium azorense Az-Fu1] gi|225644302|gb|ACN99352.1| uracil-DNA glycosylase family 4 protein [Sulfurihydrogenibium azorense Az-Fu1] Length = 211 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 80/185 (43%), Gaps = 5/185 (2%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 +K L+++ +++ C L + +M IG P + ++ G+PF G+ Sbjct: 28 EKIKLLNQINQEIQNCTKCDLHKNRKQAVLGEGNPNSPIMFIGEAPGEEEDKQGRPFVGR 87 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191 G +L K +++ R+ ++I+ I+ PP NR + E E C P + RQIE+I+P +L Sbjct: 88 AGQLLTKAIETAGYKRSDVYIANINKCRPPNNRTPTIEEQEACFPYLKRQIEIINPSVLC 147 Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 +G F + K + G + T HP +++ P + + + Sbjct: 148 LLGATAYRGIFKRET-KITKERGSILDYEGK----KVYITYHPAFVLRNPREEPTFFEDI 202 Query: 252 ITLKK 256 + Sbjct: 203 KKALE 207 >gi|18977757|ref|NP_579114.1| DNA polymerase [Pyrococcus furiosus DSM 3638] gi|18893498|gb|AAL81509.1| DNA polymerase, bacteriophage-type [Pyrococcus furiosus DSM 3638] Length = 196 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 3/188 (1%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 + +L+ + + C L + + +M IG P ++ G PF GK G +L Sbjct: 7 MKKLEEKILTCKKCPLWRLRTNPVPGYGNYDAKIMFIGEAPGYWEDQKGLPFVGKAGKVL 66 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 D++L I + R ++I+ + PP NR+ + E++ C P + +QI++I PK+++ +G Sbjct: 67 DELLDGIGLTREDVYITNVVKCRPPNNRDPTEEEIKACSPYLDQQIDIIKPKVIVTLGRH 126 Query: 197 TKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253 + N+ D + + GK T + T HP + P +K+ Sbjct: 127 STNYILKKFGFDLEPISKIHGKVFKAKTLFGTLYIFPTYHPAVALYRPQLKEELKQDFDI 186 Query: 254 LKKALKNL 261 LK L+ L Sbjct: 187 LKSLLEKL 194 >gi|317133620|ref|YP_004092934.1| phage SPO1 DNA polymerase-related protein [Ethanoligenens harbinense YUAN-3] gi|315471599|gb|ADU28203.1| phage SPO1 DNA polymerase-related protein [Ethanoligenens harbinense YUAN-3] Length = 192 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 5/188 (2%) Query: 74 ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 S EL++ ++ C L + T + +++ IG P +++ G+PF G+ G Sbjct: 2 PESWDELEAACKACTACGLAEKRTQVVFGTGSREAEVLFIGEGPGQQEDLKGEPFVGRAG 61 Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 +LDKML ++ + R++I+I+ I PP NR+ E + C P + Q +L++PKI++ + Sbjct: 62 QLLDKMLVAVGLDRSKIYIANIVKCRPPQNRDPLPEEQDACLPWLRAQTKLLAPKIIICV 121 Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253 G D K + G+W + +AT+HP L++ P K + + Sbjct: 122 GRIAGMKLMKPDL-KITREHGQWF----QRGHVLMMATLHPAALLRNPNQKPEAFKDFLA 176 Query: 254 LKKALKNL 261 L+ +K + Sbjct: 177 LRDKIKEI 184 >gi|288817443|ref|YP_003431790.1| phage SPO1 DNA polymerase-related protein [Hydrogenobacter thermophilus TK-6] gi|288786842|dbj|BAI68589.1| phage SPO1 DNA polymerase-related protein [Hydrogenobacter thermophilus TK-6] Length = 185 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 2/182 (1%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 LHEL L C L S + ++ +G P + ++ KPF GK G L Sbjct: 2 LHELYETLSKEKKCILYEGSSGYVFGDGNPDSAVVFVGEAPGEEEDKQKKPFVGKAGKYL 61 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 + LQ + + R ++I+ + PPGNR + EM C P + ++IE+I PK+++ +G+ Sbjct: 62 NAKLQEVGMRREDVYITNVVKSRPPGNRKPTKEEMLSCLPYLRKEIEIIKPKLIVCLGST 121 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 A + G+ I L T HP +++ P + + +K Sbjct: 122 ALEGLLG-KALPITKYRGQVFEYPYS-RNIKVLLTYHPAYVLRNPSADREFMEDMKKVKA 179 Query: 257 AL 258 L Sbjct: 180 LL 181 >gi|229816615|ref|ZP_04446913.1| hypothetical protein COLINT_03672 [Collinsella intestinalis DSM 13280] gi|229807821|gb|EEP43625.1| hypothetical protein COLINT_03672 [Collinsella intestinalis DSM 13280] Length = 226 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 42/185 (22%), Positives = 79/185 (42%), Gaps = 5/185 (2%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 SL E++S++ C L T + + +M +G P ++++ G+PF G+ G Sbjct: 18 SLDEIRSVMGDCRACQLYQTRTNIVFGVGNPRARVMFVGEAPGKNEDLQGEPFVGRAGEN 77 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 L+++L + R I+I+ + PP NRN E+ C P + QI I P +++ +GN Sbjct: 78 LNRILSLAGLEREDIYIANVLKCRPPQNRNPQADEVLACSPYLREQIRSIWPDVIVTLGN 137 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 +F + + G++ + + T HP ++ P + L Sbjct: 138 PASHFVLKTE-VGITKLRGRFHQM----GHFTVMPTFHPAAALRNPAWQALLEEDFRMLG 192 Query: 256 KALKN 260 L Sbjct: 193 AYLAE 197 >gi|262276833|ref|ZP_06054626.1| uracil DNA glycosylase superfamily [alpha proteobacterium HIMB114] gi|262223936|gb|EEY74395.1| uracil DNA glycosylase superfamily [alpha proteobacterium HIMB114] Length = 217 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 59/193 (30%), Positives = 103/193 (53%), Gaps = 2/193 (1%) Query: 68 DSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127 I+ +L++LK + + D + + + +MIIG P SD I+GKP Sbjct: 23 KKISNSCLTLNDLKKKINNLKDFYNKKQ-DQIVFSDGNSKSKIMIIGDAPGVSDEINGKP 81 Query: 128 FSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP 187 FSG++G +LDKML +I + R +++++ I + N+ L +E++ R II I++I+P Sbjct: 82 FSGESGELLDKMLMAINLDRNKVYLTNIINFRLQDNKKLGPVEIKNYRSIIFDHIKIINP 141 Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247 KI+ +G+ T NFFF N ++ G W+ + ++ L + HP L++ P KK + Sbjct: 142 KIIFILGSVTFNFFFKNTQSL-TKSRGHWNKIKISNNEYDCLPSYHPAFLLRQPSQKKAS 200 Query: 248 WHALITLKKALKN 260 W L LK+ + Sbjct: 201 WEDLKNLKQKIIE 213 >gi|167769246|ref|ZP_02441299.1| hypothetical protein ANACOL_00569 [Anaerotruncus colihominis DSM 17241] gi|167668886|gb|EDS13016.1| hypothetical protein ANACOL_00569 [Anaerotruncus colihominis DSM 17241] Length = 188 Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats. Identities = 50/188 (26%), Positives = 90/188 (47%), Gaps = 6/188 (3%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 S L+S + C LC T S + ++ +M IG P +++++ G+PF G+ G Sbjct: 3 ESFQALQSAALACQGCKLCQTRHSVVFGAGSQHAKIMFIGEGPGENEDLQGEPFVGRAGQ 62 Query: 135 MLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 +LDK+L + + R +I+ + PP NR+ E+E C P + QIE I PKI++ + Sbjct: 63 LLDKILTHVGLSRQNDVYITNMVKCRPPKNRDPERDEVEACMPYLRAQIEFIRPKIIVCL 122 Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253 G + + + + G++ + + + T HP L++ P+ K I Sbjct: 123 GRVAACALIDPNFKV-TRQHGEFFD----KDGLMMMGTFHPAALLRNPVNKPGALDDFIN 177 Query: 254 LKKALKNL 261 L+ L +L Sbjct: 178 LRARLDSL 185 >gi|212224669|ref|YP_002307905.1| Uracil-DNA glycosylase [Thermococcus onnurineus NA1] gi|212009626|gb|ACJ17008.1| Uracil-DNA glycosylase [Thermococcus onnurineus NA1] Length = 195 Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 87/183 (47%), Gaps = 3/183 (1%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 +++L+ ++S C L + + + + +M +G P ++ G PF G+ G +L Sbjct: 7 MNKLEEKIKSCRKCPLGELRTNAVPGSGSYNAKVMFVGEAPGYWEDQKGLPFVGRAGKVL 66 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 D++L I + R +++I+ I PP NR+ + E++ C P + RQI++I PK+++ +G Sbjct: 67 DELLAEIGLDRDEVYITNIVKCRPPDNRDPTEDEIKACSPYLDRQIDIIRPKVIVPLGRH 126 Query: 197 TKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253 + + + + + GK T I + HP + P +K+ Sbjct: 127 SMRYILEKFGFEVEPISKIHGKAFEAHTLFGKIVIMPMYHPAVALYRPALKEELRKDFQK 186 Query: 254 LKK 256 L++ Sbjct: 187 LRE 189 >gi|15899042|ref|NP_343647.1| DNA polymerase phage SPO1 N-terminal domain-containing protein [Sulfolobus solfataricus P2] gi|284175291|ref|ZP_06389260.1| DNA polymerase phage SPO1 N-terminal domain-containing protein [Sulfolobus solfataricus 98/2] gi|13815575|gb|AAK42437.1| DNA polymerase phage SPO1 N-terminal domain homolog [Sulfolobus solfataricus P2] gi|261600789|gb|ACX90392.1| phage SPO1 DNA polymerase-related protein [Sulfolobus solfataricus 98/2] Length = 216 Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats. Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 4/190 (2%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 +L + +R C L + + ++M IG P ++++I GKPF G G Sbjct: 2 DNLDLIADEVRKCQKCKLWKFRKNAVPGEGNSKAEIMFIGEAPGENEDIEGKPFVGVAGK 61 Query: 135 MLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 +L +++ + + + R + I+ + PP NR+ E+ C P + RQIE I P I++ + Sbjct: 62 LLTRLINEILGLSREDVFITNLVKCRPPNNRDPEEDEILACSPYLTRQIESIRPHIIITL 121 Query: 194 GNKTKNFFFNNDAQKT---YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 G + ++ F K + GK+ I T HP + P I+K Sbjct: 122 GRHSTSYLFKKMNMKMESIGKVRGKFYTWNIYGYKILVFPTYHPAAALYNPPIRKVLEED 181 Query: 251 LITLKKALKN 260 +K+AL + Sbjct: 182 FRKVKEALSS 191 >gi|126460679|ref|YP_001056957.1| phage SPO1 DNA polymerase-related protein [Pyrobaculum calidifontis JCM 11548] gi|126250400|gb|ABO09491.1| phage SPO1 DNA polymerase-related protein [Pyrobaculum calidifontis JCM 11548] Length = 194 Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 83/182 (45%), Gaps = 3/182 (1%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 +L +L ++ C L T + + + +MI+G P S++ G+PF G G++ Sbjct: 3 TLEQLHEEIKRCTRCPLHKTRRNAVPGEGSGRLGIMIVGEAPGSSEDEQGRPFVGAAGSL 62 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 L+K L ++ + R ++I+ + PPGNR + E+ C P ++RQIE++ P+ ++ +G Sbjct: 63 LNKTLSTLGVERGDLYITNVVKCRPPGNRTPTREEVAACLPYLLRQIEILRPRRIIALGA 122 Query: 196 KTKNFFFNNDAQKTYQ---NLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 + ++ + GK + T HP +++ P ++ L Sbjct: 123 VSAGALLGLIGRQVERVGDVRGKCFRGKVAGVDVEICVTYHPAAVLRNPRLRGTFAEDLA 182 Query: 253 TL 254 Sbjct: 183 AF 184 >gi|15606784|ref|NP_214164.1| N-terminus of phage SPO1 DNA polymerase [Aquifex aeolicus VF5] gi|2984015|gb|AAC07559.1| N-terminus of phage SPO1 DNA polymerase [Aquifex aeolicus VF5] Length = 195 Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 78/183 (42%), Gaps = 3/183 (1%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L L + C L + + L+ +G P + ++ GKPF G+ G +L Sbjct: 12 LKNLYEEWKDCTRCDLHKSRTRVVPGDGNPYSLLVFVGEAPGEEEDRQGKPFVGRAGQLL 71 Query: 137 DKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 +++++ + + R ++I+ + PP NR + IEM C P + ++IE+I PK++ +G Sbjct: 72 NRLIEEVLGMKREDVYITNVCKCRPPQNRKPTPIEMRACFPYLKKEIEIIQPKVICCLGA 131 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 + + + G+ I T HP +++ P + LK Sbjct: 132 TAGEGILG-KSLRITKVRGQVFPYPYNPR-IKVFLTYHPAYVLRNPKEETTIIKDFEKLK 189 Query: 256 KAL 258 + L Sbjct: 190 ELL 192 >gi|300311462|ref|YP_003775554.1| uracil-DNA glycosylase [Herbaspirillum seropedicae SmR1] gi|300074247|gb|ADJ63646.1| uracil-DNA glycosylase protein [Herbaspirillum seropedicae SmR1] Length = 340 Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats. Identities = 52/222 (23%), Positives = 85/222 (38%), Gaps = 12/222 (5%) Query: 47 DSAIQPITNIRHIHSPLVQQADSIAQKAC--SLHELKSLLRSFHDCHLCSTSLSTICATQ 104 ++++P+ + D + + +LK + C LC T+ Sbjct: 120 AASLEPVLIPEGEDDEPMPAVDPVIARIKQMDWPQLKEQVADCRRCGLCQGRKKTVFGVG 179 Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPG- 162 E + IG P +++I G+PF G G +LD ML S+ + R +I+ I P Sbjct: 180 DEKAKWLFIGEGPGRNEDIQGEPFVGPAGKLLDNMLVSMGVKRGDNAYIANIVKCRPTDE 239 Query: 163 ---NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSN 218 +R S E+ C P + RQIELI P +L+ +G D + G Sbjct: 240 NGRDRPPSPQEVASCLPYLQRQIELIQPTVLVALGKTAAISLLGLDPTTPVARLRGTVHR 299 Query: 219 LCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 +P + T HP L++ K TW L + Sbjct: 300 YQ----ELPLVVTYHPAYLLRSLQDKSKTWADLCLAMSTYQA 337 >gi|332527846|ref|ZP_08403884.1| putative DNA polymerase-like protein [Rubrivivax benzoatilyticus JA2] gi|332112241|gb|EGJ12217.1| putative DNA polymerase-like protein [Rubrivivax benzoatilyticus JA2] Length = 227 Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats. Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 12/188 (6%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 L+ + C L + T+ MI+G P + +++ G+PF G G + Sbjct: 37 DWQPLREAVAGCTACALAQSRTQTVFGVGHPQAHWMIVGEAPGEQEDLRGEPFVGAAGQL 96 Query: 136 LDKMLQSIEIMR-------TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188 LD ML+++ + R +++I+ PP NRN + E++ C P ++RQIEL+ P+ Sbjct: 97 LDAMLRALALSRAADGDPAQRVYIANTLKCRPPRNRNPAPDELQRCEPFLVRQIELVKPR 156 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW 248 I+L +G ++ + G+ +P + T HP L++ K W Sbjct: 157 IILAMGRFAVQALL-RSSEPIGKLRGRVHRYQ----GVPLVVTYHPAYLLRNLPDKARAW 211 Query: 249 HALITLKK 256 L Sbjct: 212 DDLCLAAA 219 >gi|218883592|ref|YP_002427974.1| predicted Uracil-DNA glycosylase [Desulfurococcus kamchatkensis 1221n] gi|218765208|gb|ACL10607.1| predicted Uracil-DNA glycosylase [Desulfurococcus kamchatkensis 1221n] Length = 216 Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 78/186 (41%), Gaps = 3/186 (1%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L + + + C L + + +M IG P + ++ +G+PF G G Sbjct: 2 SEWDSLVNSILNCKRCRLSQYRRNPVPGEGNVNAGVMFIGEAPGEKEDETGRPFVGAAGK 61 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 +L ++++S R ++I+ I PPGNR+ + E+E C P +++QIELI P++++ +G Sbjct: 62 LLIELIESTGFKRGDVYITNIVKCRPPGNRDPEDDEIEACLPYLLKQIELIKPRLIVALG 121 Query: 195 NKTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 F G+ N + + T HP + P +K Sbjct: 122 RHAARTLFRLGGLKWVNMSMMHGRPYNAVINGLQVVIIPTFHPAAALYNPGLKDELRRDF 181 Query: 252 ITLKKA 257 + K Sbjct: 182 EEVIKK 187 >gi|320535746|ref|ZP_08035831.1| uracil-DNA glycosylase, family 4 [Treponema phagedenis F0421] gi|320147402|gb|EFW38933.1| uracil-DNA glycosylase, family 4 [Treponema phagedenis F0421] Length = 265 Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats. Identities = 61/268 (22%), Positives = 107/268 (39%), Gaps = 21/268 (7%) Query: 7 LSQEQILTIALFYADS-----GVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHS 61 ++ + L + F+ S G Y + +E E E + A H Sbjct: 1 MTATEKLILYRFFKTSADYLRG-YALSEEEPVFVDTEIAPAEAAQQDAAPAQNPSTEPHV 59 Query: 62 PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTE-------GQDLMIIG 114 Q + ++ ++ + + C L +T + + E ++M+IG Sbjct: 60 LFQQAGQD--SRFSTMADIAQAVHACRGCGLAATRIHAVPGEGPEELSRLQNSVEVMVIG 117 Query: 115 YTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRT-QIHISMISPWHPPGNRNLSNIEMEI 173 P ++ +G+PF GK G +LDKML++I++ R +I+ I PP NR+ + E Sbjct: 118 EGPGADEDKTGRPFVGKAGQLLDKMLEAIQLSRKTNCYITNIVKCRPPQNRDPAPAECAA 177 Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 C + QI L P +L G N + + G++ + IP LAT H Sbjct: 178 CAQFLEAQIRLQKPLAILVFGRCAAQ-LLLNTTEGIGKLRGRFFDYN----GIPLLATYH 232 Query: 234 PQELIQYPLIKKNTWHALITLKKALKNL 261 P L++ +K+ W L + L L Sbjct: 233 PSALLRDESLKRPAWEDLKKFRTQLLQL 260 >gi|86609842|ref|YP_478604.1| uracil-DNA glycosylase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558384|gb|ABD03341.1| uracil-DNA glycosylase, family 4 [Synechococcus sp. JA-2-3B'a(2-13)] Length = 206 Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats. Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 11/193 (5%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L +LK C L ++ + ++IIG P +S+++ G PF GK+G Sbjct: 9 RDLEQLKQHCLVCQRCDLAASRTHVVVHRGNPKARILIIGEGPGESEDLQGLPFVGKSGQ 68 Query: 135 MLDKMLQSIEI-MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 +LDK+L S+ + +I + PP NR + EM+ CRP ++ QI L+ P I+L Sbjct: 69 LLDKILASVGLDPEQDTYICNVVKCRPPNNRVPTQEEMDACRPYLLEQIRLVDPWIILLT 128 Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTW 248 G + + G+W + HP L++ P K W Sbjct: 129 GATSVRSLLGEKR-GITKIRGEWIQWQGRW----CMPIFHPAYLLRNPDRTPGSPKWLMW 183 Query: 249 HALITLKKALKNL 261 + +K+ L Sbjct: 184 QDIQAVKQKYLEL 196 >gi|254451188|ref|ZP_05064625.1| uracil-DNA glycosylase, C-terminal domain protein [Octadecabacter antarcticus 238] gi|198265594|gb|EDY89864.1| uracil-DNA glycosylase, C-terminal domain protein [Octadecabacter antarcticus 238] Length = 264 Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats. Identities = 61/260 (23%), Positives = 114/260 (43%), Gaps = 12/260 (4%) Query: 12 ILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSI 70 + + + G DEP + + + A + + + + D I Sbjct: 6 AKALLDWQVEMGCDEAIGDEPVDRYALKDVKPAPKPVQAPSTLASAPPPVATPAPEVDQI 65 Query: 71 AQKACSLHEL------KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNIS 124 + + + ++ + +F C L + + + + G +MII P D+ + Sbjct: 66 SAARDAANAAQDLAALRAAMATFEGCALKPVARNLVFSGGIAGAPVMIIADAPDRDDDRA 125 Query: 125 GKPFSGKTGNMLDKMLQSIEIMRT---QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ 181 G+ F+G+TG +LDKML +I + R+ I+ + + PW+PP NR+ EM + P + R Sbjct: 126 GEMFAGRTGALLDKMLAAIGLGRSGDAPIYAAPVLPWNPPQNRDPDAEEMAMMLPFLQRH 185 Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241 I L +PKIL+ +GN + G W+++ + +P + P L+ P Sbjct: 186 ITLAAPKILILMGNGPCQALLGRSG--MTRLHGSWADVQIGSASLPAIPMFAPSYLLTTP 243 Query: 242 LIKKNTWHALITLKKALKNL 261 K+ W L++LK LK+L Sbjct: 244 SAKREAWGDLLSLKARLKDL 263 >gi|119719708|ref|YP_920203.1| phage SPO1 DNA polymerase-related protein [Thermofilum pendens Hrk 5] gi|119524828|gb|ABL78200.1| phage SPO1 DNA polymerase-related protein [Thermofilum pendens Hrk 5] Length = 217 Score = 164 bits (416), Expect = 7e-39, Method: Composition-based stats. Identities = 36/188 (19%), Positives = 75/188 (39%), Gaps = 3/188 (1%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 +L E+ + C L + T+ ++ IG P ++++ G+PF G G Sbjct: 18 RALEEIAGEIAKCEKCPLSRSRTHTVPGEGNPCSGVVFIGEAPGRNEDLQGRPFVGAAGA 77 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 +L +++ + R ++ I+ + PP NR E+ C P ++ Q+ I P++++ +G Sbjct: 78 LLTELISLAGLSREEVFITNVVKCRPPNNREPREEEIAACLPYLLAQLRAIKPRLIVTLG 137 Query: 195 NKTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 + GK + + T+HP + P ++K Sbjct: 138 KHSTKTILRMRGMSVDSIMSVRGKAYTVNAEWGQVTVFPTLHPAAALYNPAMRKVLEEDF 197 Query: 252 ITLKKALK 259 L+ L+ Sbjct: 198 RFLRGLLE 205 >gi|108803352|ref|YP_643289.1| phage SPO1 DNA polymerase-like protein [Rubrobacter xylanophilus DSM 9941] gi|108764595|gb|ABG03477.1| phage SPO1 DNA polymerase-related protein [Rubrobacter xylanophilus DSM 9941] Length = 216 Score = 164 bits (416), Expect = 9e-39, Method: Composition-based stats. Identities = 45/195 (23%), Positives = 85/195 (43%), Gaps = 17/195 (8%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 + L EL + C L + +T+ T LM++G P ++++ +G PF G+ Sbjct: 13 NREERLAELARQVSVCTRCDLSRSRTNTVFGTGDPYSPLMLVGEGPGENEDATGLPFVGR 72 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIEL 184 G +LD +L ++ + R Q++I+ I NR E+ C P + QIE Sbjct: 73 AGKLLDNILAAVNLSREQVYITNIVKCRAAVEENGRLRNRQPRAAEINACNPYLQAQIEA 132 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP--- 241 + P+I+L +G + D + ++ G+W + I +AT HP +++ Sbjct: 133 VRPEIILCLGGPAAKTIIDRD-FRITRDRGRWYEV----GGIRAMATFHPAYILRQSGEE 187 Query: 242 --LIKKNTWHALITL 254 K+ W + + Sbjct: 188 LARTKRLVWKDIQNV 202 >gi|206901596|ref|YP_002251107.1| DNA polymerase, bacteriophage-type [Dictyoglomus thermophilum H-6-12] gi|206740699|gb|ACI19757.1| DNA polymerase, bacteriophage-type [Dictyoglomus thermophilum H-6-12] Length = 210 Score = 164 bits (416), Expect = 9e-39, Method: Composition-based stats. Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 5/187 (2%) Query: 73 KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 K L L+ + +C L + + +M IG P ++ G+PF G Sbjct: 6 KIDELEILRREAENCKNCSLWQQRTNLVFGEGNPNSSIMFIGEAPGFHEDQQGRPFVGAA 65 Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192 G +L ++++S+ + R I+I+ + PP NR E++ C P + RQIE+I+PK++ Sbjct: 66 GRLLTELIESMGLKREDIYIANVLKCRPPNNREPLPEEIKACFPFLRRQIEIINPKVICT 125 Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 +G + + + GK + I T HP + + + +N Sbjct: 126 LGRYAAYAILGH-SVNISNSHGK--DYVVDGKRI--FVTYHPAAALYHGKLLENIRKDFE 180 Query: 253 TLKKALK 259 LK+ + Sbjct: 181 KLKELYE 187 >gi|189345810|ref|YP_001942339.1| phage SPO1 DNA polymerase-related protein [Chlorobium limicola DSM 245] gi|189339957|gb|ACD89360.1| phage SPO1 DNA polymerase-related protein [Chlorobium limicola DSM 245] Length = 211 Score = 164 bits (416), Expect = 9e-39, Method: Composition-based stats. Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 5/202 (2%) Query: 60 HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSD 119 + L +A + +LH L R+ C L ST + + L++IG P Sbjct: 8 ENELQSEAAGGEKTLTALHSLYERSRTCTKCRLASTRTNFVFGEGNPHARLVVIGEAPGA 67 Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIM 179 ++ G+PF G++G +LDK+LQ+++ R ++ I I PP NRN E+ C P ++ Sbjct: 68 DEDALGRPFVGRSGQLLDKILQAVQFRREEVFICNIIKCRPPQNRNPLQDEIASCMPWLL 127 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 Q++L+ P +LL +G N N GK +AT HP L++ Sbjct: 128 DQLDLLKPSMLLLLGRVAANTILQNTLSL-GAMRGKI----IRWKQFDCVATYHPAALLR 182 Query: 240 YPLIKKNTWHALITLKKALKNL 261 P K+ W + ++ + L Sbjct: 183 NPNWKRGCWEDVQMMRHHYEML 204 >gi|313114128|ref|ZP_07799680.1| uracil-DNA glycosylase, family 4 [Faecalibacterium cf. prausnitzii KLE1255] gi|310623537|gb|EFQ06940.1| uracil-DNA glycosylase, family 4 [Faecalibacterium cf. prausnitzii KLE1255] Length = 191 Score = 164 bits (416), Expect = 9e-39, Method: Composition-based stats. Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 6/185 (3%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 L+S + C LC T + + E +++ +G P +++ G PF G++G + Sbjct: 2 DWETLRSSCLACTRCELCKTRTNVVFGQGVEDAEVLFVGEGPGQNEDEQGLPFVGRSGQL 61 Query: 136 LDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 LDK L +I++ R +I+ I PP NR+ E E C P + Q L+ PKI++ +G Sbjct: 62 LDKYLFAIDLDRTKNCYIANIVKCRPPQNRDPQPAESEACMPWLREQFRLLKPKIVVCLG 121 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 + G+ I + T HP L++ P K + L Sbjct: 122 RIAAQRMI-RKDFSVTKEHGQLYE----KGGILFMGTFHPAALLRSPQNKPAAFADFTAL 176 Query: 255 KKALK 259 + ++ Sbjct: 177 RDNIE 181 >gi|296125284|ref|YP_003632536.1| phage SPO1 DNA polymerase-related protein [Brachyspira murdochii DSM 12563] gi|296017100|gb|ADG70337.1| phage SPO1 DNA polymerase-related protein [Brachyspira murdochii DSM 12563] Length = 252 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 44/221 (19%), Positives = 91/221 (41%), Gaps = 4/221 (1%) Query: 43 EKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCH-LCSTSLSTIC 101 + ++I + ++ I K L ++ + + C LC++ L+ + Sbjct: 31 RNPKKAQQAVKKEEKNITNKGIELMKEI--KNEDLKKIYNEVEKCMKCEALCNSRLNVVF 88 Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E D++ +G P ++ G PF G+ G +LDK ++ + I + + +I PP Sbjct: 89 GRGDEEPDIVFVGEAPGADEDKQGLPFVGRGGKLLDKWIEKMNINKEKYYIMNALKCRPP 148 Query: 162 GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND-AQKTYQNLGKWSNLC 220 NR+ E CR +RQ+++++PKI+ +G + D + K Sbjct: 149 ENRDPLPEEKANCRDFFVRQLQILNPKIICALGRHGFGNLIDFDLKTPFGKARNKVHYYS 208 Query: 221 TPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 +P +AT HP +++ + L + L+ + Sbjct: 209 NNGKDVPVIATYHPAYILRNQKEEDKVISDLEFMLSELEKI 249 >gi|222099134|ref|YP_002533702.1| Phage SPO1 DNA polymerase-related protein [Thermotoga neapolitana DSM 4359] gi|221571524|gb|ACM22336.1| Phage SPO1 DNA polymerase-related protein [Thermotoga neapolitana DSM 4359] Length = 192 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 80/186 (43%), Gaps = 5/186 (2%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 + +K + C L T + + ++ +G P + ++ +G+PF G+ G +L Sbjct: 9 METVKERVERCTACPLHLTRTNVVVGEGNLDTKIVFVGEGPGEEEDKTGRPFVGRAGMLL 68 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++L + I R ++I + PP NR + EM C ++ QIE+I+P +++ +G Sbjct: 69 TELLNEVGIKREDVYICNVVKCRPPNNRTPTTEEMFACGHFLLAQIEIINPSVVVALGAT 128 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL--IKKNTWHALITL 254 +FF + + G + + T HP L++ ++K L Sbjct: 129 ALSFFMDGKKVSITKVRGNPMDWL---GGKKIVPTFHPSYLLRNRSKELRKIVLEDLEKA 185 Query: 255 KKALKN 260 K +K Sbjct: 186 KSFIKE 191 >gi|284162809|ref|YP_003401432.1| phage SPO1 DNA polymerase-related protein [Archaeoglobus profundus DSM 5631] gi|284012806|gb|ADB58759.1| phage SPO1 DNA polymerase-related protein [Archaeoglobus profundus DSM 5631] Length = 199 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 87/187 (46%), Gaps = 3/187 (1%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L +++ +R C L + + ++ IG P +++ G+PF GK G L Sbjct: 3 LEDVEGEIRKCRKCKLWKYKTNYVPGEGNPNAKIVFIGEAPGKEEDLQGRPFVGKAGKYL 62 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++L+ + + R+ ++I+ + PP NR+ E+E C+P ++RQ+E+I P +++ +G Sbjct: 63 TEVLKKLGVERSDVYITNVLKCRPPNNRDPKPEEIEACKPHLLRQLEIIKPDVIVCLGRF 122 Query: 197 TKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253 + + + ++ GK ++ ++ + T HP +++ + L Sbjct: 123 SSDVILNEFGIGFRGISRDRGKVFDVEKWGKVVKIIPTYHPAAVLRNKSLADYFESDLKK 182 Query: 254 LKKALKN 260 + LK Sbjct: 183 AVEVLKK 189 >gi|254168341|ref|ZP_04875186.1| uracil-DNA glycosylase, family 4 [Aciduliprofundum boonei T469] gi|289595797|ref|YP_003482493.1| phage SPO1 DNA polymerase-related protein [Aciduliprofundum boonei T469] gi|197622622|gb|EDY35192.1| uracil-DNA glycosylase, family 4 [Aciduliprofundum boonei T469] gi|289533584|gb|ADD07931.1| phage SPO1 DNA polymerase-related protein [Aciduliprofundum boonei T469] Length = 191 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 46/187 (24%), Positives = 86/187 (45%), Gaps = 8/187 (4%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 SL +++ ++ C L T + + + +M +G P ++ G+PF G G Sbjct: 10 DSLEKIEKEIKECKKCPLYKTRKNAVPGEGGFQRRIMFVGEAPGRREDELGRPFVGAAGK 69 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 LD++L SI + R ++I+ I PPGNR+ ++ E+++C P + RQI ++ P+I+ +G Sbjct: 70 FLDELLASIGLSRKDVYITNIVKCRPPGNRDPTDEEIKLCSPYLDRQIAIMKPRIICPLG 129 Query: 195 NKTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 + + + K + GK I L HP + + +K + + Sbjct: 130 RFSAKYILEKFGFEMGKISKIQGKVFE-----GNILILPMYHPAAALYHQNLKSELYKSF 184 Query: 252 ITLKKAL 258 LK L Sbjct: 185 EVLKSLL 191 >gi|118445103|ref|YP_879168.1| phage SPO1 DNA polymerase-related protein [Clostridium novyi NT] gi|118135559|gb|ABK62603.1| phage SPO1 DNA polymerase-related protein [Clostridium novyi NT] Length = 190 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 79/186 (42%), Gaps = 6/186 (3%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 EL H+C L + +LM IG P ++ +GKPF GK G +L Sbjct: 9 WRELYKECIECHNCELGDKRTHMVFGEGNPKANLMFIGEAPGADEDRTGKPFVGKAGQLL 68 Query: 137 DKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 K L ++++ R +I+ I P NRN + E C + Q+ LI PKI++ +G Sbjct: 69 TKGLMALDLYRDRDYYITNICKCRPENNRNPMDHEAYACIQYLRNQVALIKPKIIVCLGA 128 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 + + + D + ++ GKW + + HP +++ K W L +K Sbjct: 129 VSGKYIIDKDL-RITRDRGKWIE----KKGVYIMPIFHPAAILRDDNKKPLFWGDLKEIK 183 Query: 256 KALKNL 261 + + Sbjct: 184 RKYLEI 189 >gi|320100863|ref|YP_004176455.1| phage SPO1 DNA polymerase-like protein [Desulfurococcus mucosus DSM 2162] gi|319753215|gb|ADV64973.1| phage SPO1 DNA polymerase-related protein [Desulfurococcus mucosus DSM 2162] Length = 216 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 81/190 (42%), Gaps = 4/190 (2%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L + + S C L + + +M++G P + ++ +G+PF G G Sbjct: 2 DEWGSLVNSILSCKRCRLSEHRKNPVPGEGDTNSRVMLVGEAPGEREDETGRPFVGAAGK 61 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 +L ++++SI R ++I+ + PP NR+ + E++ C P +++QIEL+ P++++ +G Sbjct: 62 LLTELIESIGFKRESLYITNVVKCRPPNNRDPEDDEIKACLPYLLKQIELLKPRVIVALG 121 Query: 195 NKTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 F GK N + T HP + P +K Sbjct: 122 RHAARTLFELGGLKWVNMSSMHGKAFNAVINGVHTVIIPTFHPAAALYNPGLKDELRKDF 181 Query: 252 I-TLKKALKN 260 ++K ++ Sbjct: 182 EGVIRKHIEE 191 >gi|294054594|ref|YP_003548252.1| phage SPO1 DNA polymerase-related protein [Coraliomargarita akajimensis DSM 45221] gi|293613927|gb|ADE54082.1| phage SPO1 DNA polymerase-related protein [Coraliomargarita akajimensis DSM 45221] Length = 349 Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 97/244 (39%), Gaps = 16/244 (6%) Query: 26 WVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACS-LHELKSLL 84 VF S+ + +A+ + P + D A S L L+ + Sbjct: 95 AVFQSLIKSTQSSSEIPASAEPTAVLKPQVVHAAQLPPPPKIDLPEGDAKSQLAWLRERV 154 Query: 85 RSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142 C+ L + + D+ G P + I+G+PF GK G +L K++ + Sbjct: 155 EQCETCNSNLNLDGR-IVFGEGSPNADIFFCGEAPGADEEIAGQPFVGKAGQLLTKIISA 213 Query: 143 IEIMRTQIHISMISPWH-----PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197 + + R ++I I W P GNR + EM C P + Q+E+I PK+++ +GN Sbjct: 214 MGLSREDVYIGNILKWRPQHDKPYGNRPPTEDEMNFCLPYLKAQLEIIQPKVIVALGNTA 273 Query: 198 KNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI--KKNTWHALITL 254 + D + Q G W + + T HP L++ + K+ W ++ + Sbjct: 274 VSGLLGQDPNRRLGQVRGNWHDFN----GTDLMITFHPSYLLRNDTMKTKRLVWEDMLKV 329 Query: 255 KKAL 258 + + Sbjct: 330 MERI 333 >gi|210631731|ref|ZP_03296973.1| hypothetical protein COLSTE_00858 [Collinsella stercoris DSM 13279] gi|210159851|gb|EEA90822.1| hypothetical protein COLSTE_00858 [Collinsella stercoris DSM 13279] Length = 235 Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 5/184 (2%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 SL E++S+L C LC T + + +M +G P ++++ G+PF G+ G Sbjct: 18 SLEEIRSVLGECRLCELCQTRTNIVFGVGNPHARVMFVGEAPGKNEDLRGEPFVGRAGEN 77 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 L+ +L + R I+I+ + PPGNRN E+ C P + QI I P I++ +GN Sbjct: 78 LNGILSLAGLKREDIYIANVLKCRPPGNRNPKADEVLACSPFLREQIRSIWPDIIVTLGN 137 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 +F + + G++ + + T HP ++ P ++ L Sbjct: 138 PATHFVLKTE-VGITKLRGRFHEM----GHFVVMPTFHPAAALRNPAWQELLEADFRMLG 192 Query: 256 KALK 259 L+ Sbjct: 193 DYLE 196 >gi|86606890|ref|YP_475653.1| uracil-DNA glycosylase [Synechococcus sp. JA-3-3Ab] gi|86555432|gb|ABD00390.1| uracil-DNA glycosylase, family 4 [Synechococcus sp. JA-3-3Ab] Length = 206 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 48/193 (24%), Positives = 81/193 (41%), Gaps = 11/193 (5%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L +L+ R C L + + ++IIG P + +++ G PF GK+G Sbjct: 9 RELEQLEQHCRVCQRCELAANRTHVVVHRGNPKARILIIGEGPGEQEDLQGLPFVGKSGQ 68 Query: 135 MLDKMLQSIEIM-RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 +LDK+L S+ + +I + PP NR + EM+ CRP ++ QI L+ P I+L Sbjct: 69 LLDKILASVGLDSERDTYICNVVKCRPPNNRVPTQEEMDACRPYLLEQIRLVDPWIILLT 128 Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTW 248 G + D + + G+W + HP L++ P K W Sbjct: 129 GATSVRSLLG-DKRGITKIRGEWIQWQGRW----CMPIFHPAYLLRNPDRTPGSPKWLMW 183 Query: 249 HALITLKKALKNL 261 + +K+ L Sbjct: 184 QDIQAVKQKYLEL 196 >gi|254168263|ref|ZP_04875109.1| uracil-DNA glycosylase, family 4 [Aciduliprofundum boonei T469] gi|197622772|gb|EDY35341.1| uracil-DNA glycosylase, family 4 [Aciduliprofundum boonei T469] Length = 191 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 46/187 (24%), Positives = 86/187 (45%), Gaps = 8/187 (4%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 SL +++ ++ C L T + + + +M +G P ++ G+PF G G Sbjct: 10 DSLEKIEKEIKECKKCPLYKTRKNAVPGEGGFQRRIMFVGEAPGRREDELGRPFVGSAGK 69 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 LD++L SI + R ++I+ I PPGNR+ ++ E+++C P + RQI ++ P+I+ +G Sbjct: 70 FLDELLASIGLSRKDVYITNIVKCRPPGNRDPTDEEIKLCSPYLDRQIAIMKPRIICPLG 129 Query: 195 NKTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 + + + K + GK I L HP + + +K + + Sbjct: 130 RFSAKYILEKFGFEIGKISKIQGKVFE-----GNILILPMYHPAAALYHQNLKTELYKSF 184 Query: 252 ITLKKAL 258 LK L Sbjct: 185 EVLKSLL 191 >gi|315231723|ref|YP_004072159.1| uracil-DNA glycosylase [Thermococcus barophilus MP] gi|315184751|gb|ADT84936.1| uracil-DNA glycosylase [Thermococcus barophilus MP] Length = 194 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 46/187 (24%), Positives = 89/187 (47%), Gaps = 3/187 (1%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 + +L+ +R+ C L + + + + + +M +G P ++ G PF G+ G +L Sbjct: 7 MKKLEERIRNCKKCPLSALRTNAVPGSGSYDAKVMFVGEAPGYWEDQKGLPFVGRAGKVL 66 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 D++L I + R ++I+ I PP NR+ + E++ C P + RQI++I PKI++ +G Sbjct: 67 DELLSEIGLKREDVYITNIVKCRPPNNRDPNEDEIKACSPYLDRQIDIIRPKIIVPLGRH 126 Query: 197 TKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253 + ++ +A+ + GK T + + HP + P +K+ Sbjct: 127 SMSYILRKFGFEAEPISRIHGKTFEARTLFGKVIIMPMYHPAVALYRPQLKEELRKDFKK 186 Query: 254 LKKALKN 260 LK L N Sbjct: 187 LKNVLMN 193 >gi|255070667|ref|XP_002507415.1| predicted protein [Micromonas sp. RCC299] gi|226522690|gb|ACO68673.1| predicted protein [Micromonas sp. RCC299] Length = 248 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 51/241 (21%), Positives = 94/241 (39%), Gaps = 11/241 (4%) Query: 28 FDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQ-ADSIAQKACSLHELKSLLRS 86 P A+ +S ++ P R + + AD+ + SL EL LRS Sbjct: 5 LALPRALASALPLGNHRSSPRSVPPRAPPRWVRPRALASDADARSPSFSSLDELAHHLRS 64 Query: 87 FHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIE-I 145 L S + +MIIG P ++ G PF G+ G +LD++ S+ Sbjct: 65 LTGDPLESDGGRIVTFRGDTNARVMIIGEAPGAEEDKLGVPFVGRAGKLLDEIFASVTLS 124 Query: 146 MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 +++ + P NR+ + E+E R + +I L+ P I++ G + + Sbjct: 125 TDRHCYVTNVVKRRPLNNRDPTAREIEWYRGYLREEIRLLDPAIIVCTGRHSMRTLLGKN 184 Query: 206 AQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWHALITLKKALKN 260 + + G+W ++ + HP L++ P K TW + +K+ + Sbjct: 185 CEGITKIRGRWFDV----DGRVVMPMFHPSYLLRNPQKTPGSPKALTWDDIREVKRKVDE 240 Query: 261 L 261 L Sbjct: 241 L 241 >gi|294101873|ref|YP_003553731.1| phage SPO1 DNA polymerase-related protein [Aminobacterium colombiense DSM 12261] gi|293616853|gb|ADE57007.1| phage SPO1 DNA polymerase-related protein [Aminobacterium colombiense DSM 12261] Length = 212 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 15/208 (7%) Query: 59 IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPS 118 +++A +A EL + S C L T +ST+ LM++G P Sbjct: 9 PTGEDIKEAQKLA-----WKELIQQISSCGKCGLHKTRVSTVPGEGNTKTHLMLVGEGPG 63 Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPII 178 + ++ GKPF GK G +L K+L++ I R ++I+ + PP NR + EM C + Sbjct: 64 EEEDEQGKPFVGKAGQLLTKILKAAGISRKDVYITNVVKCRPPHNRVPAIEEMMTCNMYL 123 Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238 QI LI P I+L +GN +F ++ G+W I + HP L+ Sbjct: 124 EAQIALIRPSIILCLGNTPTKWFLK-TSEGISNLRGRWF----KWRGIDLMPIFHPSYLL 178 Query: 239 QYPLIKK-----NTWHALITLKKALKNL 261 + KK TW + +K+ L L Sbjct: 179 RNESRKKGSPKDLTWQDIRAVKEKLDQL 206 >gi|160945470|ref|ZP_02092696.1| hypothetical protein FAEPRAM212_02996 [Faecalibacterium prausnitzii M21/2] gi|158443201|gb|EDP20206.1| hypothetical protein FAEPRAM212_02996 [Faecalibacterium prausnitzii M21/2] Length = 193 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 46/187 (24%), Positives = 81/187 (43%), Gaps = 6/187 (3%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 + LK+ + C LC+T + + +++ +G P S++ G PF G++G + Sbjct: 5 DMDTLKAECLACTRCELCATRTNVVFGQGVPDAEVLFVGEGPGQSEDEQGLPFVGRSGQL 64 Query: 136 LDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 LDK L +I++ R +I+ I PP NR+ E E C P + Q L+ PKI++ +G Sbjct: 65 LDKYLFAIDLDRKKNCYIANIVKCRPPQNRDPLPAESEACMPWLREQFRLLHPKIVVCLG 124 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 D + G+ I + T HP L++ P K + L Sbjct: 125 RVAAQRMIRQDFSV-TREHGQIIE----KGGILFMGTFHPAALLRQPQNKPEAFADFTVL 179 Query: 255 KKALKNL 261 + + + Sbjct: 180 RDTIAAV 186 >gi|295105370|emb|CBL02914.1| uracil-DNA glycosylase, family 4 [Faecalibacterium prausnitzii SL3/3] Length = 190 Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 46/187 (24%), Positives = 81/187 (43%), Gaps = 6/187 (3%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 + LK+ + C LC+T + + +++ +G P S++ G PF G++G + Sbjct: 2 DMDTLKAECLACTRCELCATRTNVVFGQGVPDAEVLFVGEGPGQSEDEQGLPFVGRSGQL 61 Query: 136 LDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 LDK L +I++ R +I+ I PP NR+ E E C P + Q L+ PKI++ +G Sbjct: 62 LDKYLFAIDLDRKKNCYIANIVKCRPPQNRDPLPAESEACMPWLREQFRLLHPKIVVCLG 121 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 D + G+ I + T HP L++ P K + L Sbjct: 122 RVAAQRMIRQDFSV-TREHGQIIE----KGGILFMGTFHPAALLRQPQNKPEAFADFTVL 176 Query: 255 KKALKNL 261 + + + Sbjct: 177 RDTIAAV 183 >gi|159042210|ref|YP_001541462.1| phage SPO1 DNA polymerase-related protein [Caldivirga maquilingensis IC-167] gi|157921045|gb|ABW02472.1| phage SPO1 DNA polymerase-related protein [Caldivirga maquilingensis IC-167] Length = 209 Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 79/182 (43%), Gaps = 3/182 (1%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L E+ S + + C L + + ++M+IG P ++ +G+PF G G Sbjct: 11 DELAEINSEVSNCRKCPLYLSRKKAVPGEGNPRAEVMLIGEAPGRVEDETGRPFVGAAGK 70 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 +LD++L I + R ++I+ + PP NR+ + E+ C+P ++RQI ++ P+ ++ +G Sbjct: 71 LLDELLHEIGVDRGNLYITNVVKCRPPNNRDPTEEEINACKPYLIRQIAVVRPRKIITLG 130 Query: 195 NKTKNFFFNNDAQKTY---QNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 + + + + GK + T HP + P ++ L Sbjct: 131 RHSTRVILSLNGLGFSELAKVRGKVFKVNIAGVNADVYPTYHPAAALYNPSVRNLIKEDL 190 Query: 252 IT 253 Sbjct: 191 AK 192 >gi|295317544|gb|ADF97921.1| uracil-DNA glycosylase [Clostridium botulinum F str. 230613] Length = 174 Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 6/169 (3%) Query: 94 STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRT-QIHI 152 + + +M IG P ++ +G+PF GK G +L K L +++ R +I Sbjct: 5 KNRTNMVFGEGNISAPIMFIGEAPGADEDRTGRPFVGKAGQLLTKALLALDFKRDEHYYI 64 Query: 153 SMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN 212 + P NR E C P + Q+ L+ PKI++ +G + + + ++ Sbjct: 65 CNVCKCRPENNRTPKEEEAMTCLPYLRNQVALVKPKIMICLGATALKYIMG-EQFRITRD 123 Query: 213 LGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 GKW +AT HP L + KK W L ++++ L Sbjct: 124 RGKWIE----RKGYYIMATFHPAALFRDESKKKLLWQDLKSIREKYDEL 168 >gi|297527109|ref|YP_003669133.1| phage SPO1 DNA polymerase-related protein [Staphylothermus hellenicus DSM 12710] gi|297256025|gb|ADI32234.1| phage SPO1 DNA polymerase-related protein [Staphylothermus hellenicus DSM 12710] Length = 212 Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats. Identities = 44/188 (23%), Positives = 87/188 (46%), Gaps = 3/188 (1%) Query: 74 ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 L L ++ C L + + + D+M +G P ++ +G+PF G G Sbjct: 6 CNELARLAEEIKKCRKCTLYLSRKNAVPGEGPCNADVMFVGEAPGSKEDETGRPFVGAAG 65 Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 +L ++L+ I + R+ ++I+ + PP NR+ + E+E C P ++RQI++I PKI++ + Sbjct: 66 KLLMQLLELIGLKRSDVYITNVVKCRPPNNRDPTPEEIEACSPYLIRQIKIIKPKIIVAL 125 Query: 194 GNKTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 G + F F + GK + + +AT HP + P ++ + + Sbjct: 126 GRHSARFLFSRAGLKWSNMRRMHGKVFSARIDGVEVKIMATYHPAAALYSPKLRPDLEND 185 Query: 251 LITLKKAL 258 L+ + Sbjct: 186 FRVLESLI 193 >gi|146304819|ref|YP_001192135.1| phage SPO1 DNA polymerase-like protein [Metallosphaera sedula DSM 5348] gi|145703069|gb|ABP96211.1| phage SPO1 DNA polymerase-related protein [Metallosphaera sedula DSM 5348] Length = 211 Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 4/184 (2%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 SL ++ + + + H C L T + D++ +G P ++ +G+PF G G Sbjct: 2 SSLQDISNQVIACHKCSLSRTRTHAVPGEGNPTSDVVFVGEAPGAKEDETGRPFVGSAGQ 61 Query: 135 MLDKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 +L ++++ R++I+I+ I PP NR+ E+E C P ++ QI LI PK+++ + Sbjct: 62 LLTELIRKYLRRDRSEIYITNIVKCRPPNNRDPEKEEIEACSPYLLTQIRLIKPKVIVTL 121 Query: 194 GNKTK---NFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 G + + GK +L + + T HP + P +K++ Sbjct: 122 GRHSTGFFQTLAGLPLTPISRCHGKPFHLDLGYGTVTVFPTYHPAAALYNPPLKRDLEED 181 Query: 251 LITL 254 L Sbjct: 182 FQRL 185 >gi|225849981|ref|YP_002730215.1| uracil-DNA glycosylase family 4 protein [Persephonella marina EX-H1] gi|225645579|gb|ACO03765.1| uracil-DNA glycosylase family 4 protein [Persephonella marina EX-H1] Length = 216 Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats. Identities = 45/185 (24%), Positives = 80/185 (43%), Gaps = 5/185 (2%) Query: 69 SIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128 I +K + ++ +++ +C L + + LM IG P ++ G+PF Sbjct: 29 DIKEKEKLMSQINEQIQNCTNCDLYKSRTQAVLGEGNLNAKLMFIGEAPGGEEDKQGRPF 88 Query: 129 SGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188 G+ G +L K++++ R +I+ I PPGNR + EME C P + +QIE+I PK Sbjct: 89 VGRAGKLLTKLIEAAGYRREDFYIANICKCRPPGNRTPTPWEMERCFPYLKKQIEIIDPK 148 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW 248 +L +G F N + + G N T HP +++ P + + Sbjct: 149 VLCLLGATAGRAFLNRN-VAITKERGSIINWE----GRILYLTFHPAYVLRNPDAEITLF 203 Query: 249 HALIT 253 + Sbjct: 204 EDIKK 208 >gi|240103871|ref|YP_002960180.1| Uracil-DNA glycosylase [Thermococcus gammatolerans EJ3] gi|239911425|gb|ACS34316.1| Uracil-DNA glycosylase [Thermococcus gammatolerans EJ3] Length = 196 Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats. Identities = 43/188 (22%), Positives = 86/188 (45%), Gaps = 3/188 (1%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 + +L+ +R+ C L + + + + +M +G P ++ G PF G+ G +L Sbjct: 9 MRKLEEKIRNCRKCPLGQLRTNAVPGSGSYDAKVMFVGEAPGYWEDQKGLPFVGRAGKVL 68 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 D++L+ I + R ++I+ I PP NR+ + E+ C P + QI++I PK+++ +G Sbjct: 69 DELLEGIGLSRDDVYITNIVKCRPPENRDPTEEEIRACSPYLDMQIDIIRPKVIVPLGRH 128 Query: 197 TKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253 + + + + + GK T I + HP + P +++ Sbjct: 129 SMGYLLRKFGFEPEPISKIHGKVFRANTLFGRIIIMPMYHPAAALYKPPLREELRKDFEK 188 Query: 254 LKKALKNL 261 L+K L L Sbjct: 189 LRKILNEL 196 >gi|48425936|pdb|1VK2|A Chain A, Crystal Structure Of Uracil-Dna Glycosylase (Tm0511) From Thermotoga Maritima At 1.90 A Resolution Length = 204 Score = 162 bits (409), Expect = 5e-38, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 75/181 (41%), Gaps = 5/181 (2%) Query: 82 SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 ++ C L + + ++ +G P + ++ +G+PF G+ G +L ++L+ Sbjct: 25 ERVKKCTACPLHLNRTNVVVGEGNLDTRIVFVGEGPGEEEDKTGRPFVGRAGXLLTELLR 84 Query: 142 SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 I R ++I + PP NR + E C ++ QIE+I+P +++ +G +FF Sbjct: 85 ESGIRREDVYICNVVKCRPPNNRTPTPEEQAACGHFLLAQIEIINPDVIVALGATALSFF 144 Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI--KKNTWHALITLKKALK 259 + + G + + T HP L++ ++ + K +K Sbjct: 145 VDGKKVSITKVRGNPIDWL---GGKKVIPTFHPSYLLRNRSNELRRIVLEDIEKAKSFIK 201 Query: 260 N 260 Sbjct: 202 K 202 >gi|242398863|ref|YP_002994287.1| Uracil-DNA glycosylase [Thermococcus sibiricus MM 739] gi|242265256|gb|ACS89938.1| Uracil-DNA glycosylase [Thermococcus sibiricus MM 739] Length = 194 Score = 162 bits (409), Expect = 5e-38, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 88/191 (46%), Gaps = 3/191 (1%) Query: 73 KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 K+ S+ L+ + C L + + + + +M +G P ++ G PF G+ Sbjct: 4 KSESMKRLEERIIKCRKCPLGELRTNAVPGSGSYESKVMFVGEGPGYWEDQEGLPFVGRA 63 Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192 G +LD++L+SI + R +++I+ I PP NR+ + E++ C P + QI+LI PKI++ Sbjct: 64 GKVLDELLESIGLTRDKVYITNIVKCRPPNNRDPTEEEVKACSPYLDMQIDLIRPKIIVP 123 Query: 193 IGNKTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249 +G + + D + + GK T I + HP + P +K+ Sbjct: 124 LGRHSMAYILRKFGFDPEPISKIHGKTFEARTLFGKIVIMPVYHPAVALYRPQLKEELQQ 183 Query: 250 ALITLKKALKN 260 LK +N Sbjct: 184 DFKKLKDFYRN 194 >gi|15643277|ref|NP_228321.1| hypothetical protein TM0511 [Thermotoga maritima MSB8] gi|31615491|pdb|1L9G|A Chain A, Crystal Structure Of Uracil-Dna Glycosylase From T. Maritima gi|4981023|gb|AAD35596.1|AE001727_8 conserved hypothetical protein [Thermotoga maritima MSB8] Length = 192 Score = 162 bits (409), Expect = 5e-38, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 75/181 (41%), Gaps = 5/181 (2%) Query: 82 SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 ++ C L + + ++ +G P + ++ +G+PF G+ G +L ++L+ Sbjct: 13 ERVKKCTACPLHLNRTNVVVGEGNLDTRIVFVGEGPGEEEDKTGRPFVGRAGMLLTELLR 72 Query: 142 SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 I R ++I + PP NR + E C ++ QIE+I+P +++ +G +FF Sbjct: 73 ESGIRREDVYICNVVKCRPPNNRTPTPEEQAACGHFLLAQIEIINPDVIVALGATALSFF 132 Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI--KKNTWHALITLKKALK 259 + + G + + T HP L++ ++ + K +K Sbjct: 133 VDGKKVSITKVRGNPIDWL---GGKKVIPTFHPSYLLRNRSNELRRIVLEDIEKAKSFIK 189 Query: 260 N 260 Sbjct: 190 K 190 >gi|148269551|ref|YP_001244011.1| phage SPO1 DNA polymerase-related protein [Thermotoga petrophila RKU-1] gi|170288227|ref|YP_001738465.1| phage SPO1 DNA polymerase-related protein [Thermotoga sp. RQ2] gi|281411730|ref|YP_003345809.1| phage SPO1 DNA polymerase-related protein [Thermotoga naphthophila RKU-10] gi|147735095|gb|ABQ46435.1| phage SPO1 DNA polymerase-related protein [Thermotoga petrophila RKU-1] gi|170175730|gb|ACB08782.1| phage SPO1 DNA polymerase-related protein [Thermotoga sp. RQ2] gi|281372833|gb|ADA66395.1| phage SPO1 DNA polymerase-related protein [Thermotoga naphthophila RKU-10] Length = 193 Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 74/181 (40%), Gaps = 5/181 (2%) Query: 82 SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 ++ C L + + ++ +G P + ++ +G+PF G+ G +L ++L+ Sbjct: 13 ERVKKCTACPLHLNRTNVVVGEGNLDTRIVFVGEGPGEEEDKTGRPFVGRAGMLLTELLR 72 Query: 142 SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 I R ++I + PP NR + E C ++ QIE+I+P +++ +G +F Sbjct: 73 ESGIRREDVYICNVVKCRPPNNRTPTPEEQAACGHFLLAQIEIINPDVIVALGATALSFL 132 Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI--KKNTWHALITLKKALK 259 + + G + + T HP L++ +K + K +K Sbjct: 133 MDGKKVSITKIRGNPIDWLAGK---KVIPTFHPSYLLRNRSNELRKIVLEDIEKAKSFIK 189 Query: 260 N 260 Sbjct: 190 K 190 >gi|11499858|ref|NP_071102.1| DNA polymerase [Archaeoglobus fulgidus DSM 4304] gi|2648243|gb|AAB88977.1| DNA polymerase, bacteriophage-type [Archaeoglobus fulgidus DSM 4304] Length = 199 Score = 161 bits (408), Expect = 6e-38, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 84/183 (45%), Gaps = 3/183 (1%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 SL ++ + S C L T + + E +++ +G P +++ G+PF G G Sbjct: 2 ESLDDIVREIMSCRKCDLHKTKTNYVPGVGNEKAEIVFVGEAPGRDEDLKGEPFVGAAGK 61 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 +L +ML SI + R ++I+ + PP NR+ + E+E C ++RQ+E I P +++ +G Sbjct: 62 LLTEMLASIGLRREDVYITNVLKCRPPNNRDPTPEEVEKCGDYLVRQLEAIRPNVIVCLG 121 Query: 195 NKTKNF---FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 F F+ + + GK + + +A HP ++ P +++ Sbjct: 122 RFAAQFIFNLFDLEFTTISRVKGKVYEVERWGKKVKVIAIYHPAAVLYRPQLREEYESDF 181 Query: 252 ITL 254 + Sbjct: 182 KKI 184 >gi|218516704|ref|ZP_03513544.1| probable DNA-directed DNA polymerase protein (uracil-DNA glycosylase) [Rhizobium etli 8C-3] Length = 183 Score = 161 bits (408), Expect = 7e-38, Method: Composition-based stats. Identities = 66/179 (36%), Positives = 105/179 (58%), Gaps = 1/179 (0%) Query: 83 LLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142 + +F+ C+L ++ STI A+ +M+IG PS D+ G PFSGK+G + DKML + Sbjct: 1 AIEAFNGCNLKHSARSTIFASGDAESGIMVIGSAPSAEDDREGLPFSGKSGQLFDKMLAA 60 Query: 143 IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202 I + R+ + ++ + PW PPGNR S E++ICRP I RQI L P+ +L +GN FF Sbjct: 61 IGLNRSSVLLTQVIPWRPPGNRAASAAEIDICRPFIERQIALAEPQAILLLGNFAARFFL 120 Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + G+W ++ IP +A++HPQ+L+ P+ K+ W+ L+ + LK+L Sbjct: 121 GENDTIHG-LRGRWKDIVIADRAIPAIASLHPQDLLTAPVNKRLAWNDLLAFQAKLKSL 178 >gi|303242850|ref|ZP_07329314.1| phage SPO1 DNA polymerase-related protein [Acetivibrio cellulolyticus CD2] gi|302589596|gb|EFL59380.1| phage SPO1 DNA polymerase-related protein [Acetivibrio cellulolyticus CD2] Length = 189 Score = 161 bits (408), Expect = 7e-38, Method: Composition-based stats. Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 5/186 (2%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 + EL + ++C L + + L++IG P + +++ G PF G G + Sbjct: 3 NWEELINSCTGCYNCQLGRKRNNIVIGRGNRNASLLMIGEGPGEQEDLQGLPFVGAAGKL 62 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 LD +L++ I Q +I+ + PPGNR ++ E E C P + Q+ LI PKI++ +G Sbjct: 63 LDLLLKAQMIKEDQYYIANVVKCRPPGNRVPTDEEAEKCLPYLRNQVYLIKPKIIVCLGA 122 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 + + +A + Q G+W + T HP L++ K W + +K Sbjct: 123 TAMKYVVDKNA-RITQIRGQWIE----RKGYWIMPTFHPAALLRDESKKILMWEDIKKVK 177 Query: 256 KALKNL 261 + + L Sbjct: 178 QRMDCL 183 >gi|126466206|ref|YP_001041315.1| phage SPO1 DNA polymerase-related protein [Staphylothermus marinus F1] gi|126015029|gb|ABN70407.1| phage SPO1 DNA polymerase-related protein [Staphylothermus marinus F1] Length = 212 Score = 161 bits (408), Expect = 7e-38, Method: Composition-based stats. Identities = 43/195 (22%), Positives = 89/195 (45%), Gaps = 3/195 (1%) Query: 70 IAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129 + L +L ++ C L + + + ++M +G P ++ G+PF Sbjct: 2 ASNDCAELTKLAEEIKKCQKCPLHLSRKNAVPGEGPCNAEIMFVGEAPGSKEDEIGRPFV 61 Query: 130 GKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189 G G +L ++L+ I + R ++I+ + PP NR+ + E+E C P ++RQI++I PKI Sbjct: 62 GAAGKLLTQLLELIGLKRPDVYITNVVKCRPPNNRDPTPEEIEACSPYLIRQIKIIKPKI 121 Query: 190 LLFIGNKTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKN 246 ++ +G + F F GK + + +AT HP + P ++ Sbjct: 122 IVALGRHSARFLFSRAGLKWSNMKAMHGKVFSARIDGVEVKIMATYHPAAALYSPKLRPE 181 Query: 247 TWHALITLKKALKNL 261 + L++ ++++ Sbjct: 182 LENDFHVLERLIQDI 196 >gi|332295615|ref|YP_004437538.1| phage SPO1 DNA polymerase-related protein [Thermodesulfobium narugense DSM 14796] gi|332178718|gb|AEE14407.1| phage SPO1 DNA polymerase-related protein [Thermodesulfobium narugense DSM 14796] Length = 209 Score = 161 bits (408), Expect = 7e-38, Method: Composition-based stats. Identities = 46/189 (24%), Positives = 89/189 (47%), Gaps = 10/189 (5%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L ++ ++ C L T ++ + D+M+IG P ++++I G PF GK G +L Sbjct: 25 LSDILIEAKNCKKCKLSETRINVVFGEGPMNPDIMVIGEGPGETEDIQGLPFVGKAGQLL 84 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 K+ +S+ + R I+I+ + PPGNRN E+E CRP + QI++++PKI++ +G Sbjct: 85 TKIFESVSLNRKDIYITNVVKCRPPGNRNPLPEEIEQCRPFLDAQIKILNPKIIILLGAV 144 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWHAL 251 + + G+ + + HP L++ + TW + Sbjct: 145 ACKTILK-NFSSITKIRGEIILQDNRYY----IPMFHPSYLLRNASRSIGSPRWLTWKDI 199 Query: 252 ITLKKALKN 260 +K+ ++ Sbjct: 200 QKVKQFIEE 208 >gi|168187460|ref|ZP_02622095.1| uracil-DNA glycosylase family 4 protein [Clostridium botulinum C str. Eklund] gi|169294650|gb|EDS76783.1| uracil-DNA glycosylase family 4 protein [Clostridium botulinum C str. Eklund] Length = 185 Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 77/186 (41%), Gaps = 6/186 (3%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 EL H C+L + + LM IG P ++ +G+PF G+ GN+L Sbjct: 4 WRELYKECVECHKCNLVEGRNNMVFGEGNPKAKLMFIGEAPGADEDRTGRPFVGRAGNLL 63 Query: 137 DKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 K L ++++ R +I+ I P NRN E C + Q+ LI P+I++ +G Sbjct: 64 TKGLMALDLHREKDYYITNICKCRPENNRNPMEHEAYACIQYLRNQVALIKPEIIVCLGA 123 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 + + D + ++ G W I + HP +++ K W L +K Sbjct: 124 VAGKYIIDKDL-RITRDRGMWVE----KKGIYIMPIFHPAAILRDDKKKVMFWKDLKEIK 178 Query: 256 KALKNL 261 + + Sbjct: 179 RKYLEI 184 >gi|119872232|ref|YP_930239.1| phage SPO1 DNA polymerase-related protein [Pyrobaculum islandicum DSM 4184] gi|119673640|gb|ABL87896.1| phage SPO1 DNA polymerase-related protein [Pyrobaculum islandicum DSM 4184] Length = 193 Score = 161 bits (407), Expect = 8e-38, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 79/179 (44%), Gaps = 3/179 (1%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 L +L ++ C L + + + +MI+G P S++ G+PF G G + Sbjct: 2 DLEDLNEKIKRCTRCPLHLYRKNAVPGEGSLKLGIMIVGEAPGASEDEEGRPFVGVAGQL 61 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 L K L + I R ++I+ + PPGNR + E+E C P +++QI ++ PK ++ +G Sbjct: 62 LTKTLAKLGISRDDVYITNVVKCRPPGNRTPTREEIEACLPYLLQQIVILKPKRIVALGL 121 Query: 196 KTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 + + K GK + T HP +++ P +++ + L Sbjct: 122 ISGKTLLKLVGREVDKIGNVRGKCFRGQVAGVNLEICLTYHPAAVLRNPHLREVFENDL 180 >gi|268679863|ref|YP_003304294.1| phage SPO1 DNA polymerase-related protein [Sulfurospirillum deleyianum DSM 6946] gi|268617894|gb|ACZ12259.1| phage SPO1 DNA polymerase-related protein [Sulfurospirillum deleyianum DSM 6946] Length = 220 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 51/189 (26%), Positives = 94/189 (49%), Gaps = 5/189 (2%) Query: 71 AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130 + +C+L ELK+ + H C L + + I +M IG PS S++ +G FSG Sbjct: 36 SALSCNLEELKATVAQCHLCALSKSRKNIIFGAGNLKAKVMFIGDNPSVSEDETGMLFSG 95 Query: 131 KTGNMLDKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189 K+G +L KM++++ I + +++++ I P NR + E+ C+P +M+QI+LI PKI Sbjct: 96 KSGELLAKMIENVLLIPKEEVYVTHILKCKTPENRVPTPEEVACCKPYMMQQIQLIQPKI 155 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249 ++ +G+ + + G + + T HP L++ P KK + Sbjct: 156 IVTLGSTSFHHLTGEYETPMDTIRGSVLHF----GEAKLIPTFHPNFLLRNPSAKKEVYA 211 Query: 250 ALITLKKAL 258 L+ ++ L Sbjct: 212 DLLKVRSML 220 >gi|206896457|ref|YP_002247082.1| DNA polymerase, bacteriophage-type [Coprothermobacter proteolyticus DSM 5265] gi|206739074|gb|ACI18152.1| DNA polymerase, bacteriophage-type [Coprothermobacter proteolyticus DSM 5265] Length = 186 Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 74/183 (40%), Gaps = 4/183 (2%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 EL+ + C LC T + + + L ++G P +++ G PF G+ G +L Sbjct: 6 WKELEQFALNCKACELCKTRRNVVFGSGDPNSRLWLVGEAPGSNEDEQGLPFVGQAGAIL 65 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 D L+ R + I+ + PP N + + + C PI+ Q+ + PK +L +G Sbjct: 66 DTFLEKNGFKRHSLFITNVIKCRPPNNADPTEDQKSNCFPILAAQLAIGKPKYILALGRH 125 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 F + + G+ + T HP +++ P + + H + + + Sbjct: 126 AAEAFVPKPFRSIKEIRGQV----VLSGETKVVVTYHPAAVLRNPRLGEIVEHDIQMMSR 181 Query: 257 ALK 259 + Sbjct: 182 LIA 184 >gi|139439476|ref|ZP_01772908.1| Hypothetical protein COLAER_01933 [Collinsella aerofaciens ATCC 25986] gi|133775029|gb|EBA38849.1| Hypothetical protein COLAER_01933 [Collinsella aerofaciens ATCC 25986] Length = 206 Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 44/189 (23%), Positives = 83/189 (43%), Gaps = 5/189 (2%) Query: 71 AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130 A + +L E++++L H C L + + + +M IG P ++++ G+PF G Sbjct: 13 APREVALEEIEAVLGDCHLCQLYQSRHNIVFGVGNPRARVMFIGEAPGRNEDLQGEPFVG 72 Query: 131 KTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 G L+ +L + R ++I+ + PPGNRN E+ C P + QI I P I+ Sbjct: 73 AAGEDLNGILSLAGLKREDVYIANVLKCRPPGNRNPRPEEVLACSPFLREQIRSIWPDII 132 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 + +GN +F + + G++ + + T HP ++ P ++ Sbjct: 133 VTLGNPATHFVLKTE-IGITKLRGRFHQM----GHFVVMPTFHPAAALRNPAWQELLEED 187 Query: 251 LITLKKALK 259 L L+ Sbjct: 188 FKMLGDYLE 196 >gi|225619055|ref|YP_002720281.1| uracil-DNA glycosylase [Brachyspira hyodysenteriae WA1] gi|225213874|gb|ACN82608.1| uracil-DNA glycosylase [Brachyspira hyodysenteriae WA1] Length = 249 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 42/191 (21%), Positives = 81/191 (42%), Gaps = 2/191 (1%) Query: 73 KACSLHELKSLLRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 K L ++ S + C LC++ L+ + E D++ +G P ++ G PF G+ Sbjct: 56 KNEELKKIYSEVEKCMKCEALCNSRLNVVFGRGDEEPDIVFVGEAPGADEDKQGLPFVGR 115 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191 G +LDK ++ + I + +I PP NR+ E CR + Q+++++PKI+ Sbjct: 116 GGKLLDKWIERMNINNKKYYIMNALKCRPPENRDPLPEEKSNCRDYFVNQLKILNPKIIC 175 Query: 192 FIGNKTKNFFFNND-AQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 +G + D + K +P +AT HP +++ + Sbjct: 176 ALGRHGFGNLIDFDLKTPFGKARNKVHYYNNNGKDVPVIATYHPAYILRNQKEEDKVIAD 235 Query: 251 LITLKKALKNL 261 L + L+ + Sbjct: 236 LEFMLNELEKI 246 >gi|269986729|gb|EEZ93009.1| phage SPO1 DNA polymerase-related protein [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 189 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 1/187 (0%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 SL+++ + C LC + + E D+++IG P ++++ G+PF G +G Sbjct: 2 ESLNDISKEIVKCTLCELCLKRTNAVPGEGNEKADIVVIGEAPGKNEDLQGRPFIGMSGK 61 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 L K L+S+ I R + I+ PP NR E++ CR ++RQ+ I+PK++L +G Sbjct: 62 FLTKNLESLNIKRDSVFITNAVKCRPPNNRKPKKEELDKCRSYLVRQLSSINPKLILALG 121 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 + + + GK ++ L T HP +++P +K L Sbjct: 122 TSAATS-LGIEFKHLSEIKGKVIDISLNGKKFKCLVTFHPSFPMRFPSARKAFLSDLSMA 180 Query: 255 KKALKNL 261 KNL Sbjct: 181 FNLYKNL 187 >gi|15896249|ref|NP_349598.1| Uracil-DNA glycosylase [Clostridium acetobutylicum ATCC 824] gi|15026053|gb|AAK80938.1|AE007796_8 Uracil-DNA glycosylase [Clostridium acetobutylicum ATCC 824] gi|325510404|gb|ADZ22040.1| Uracil-DNA glycosylase [Clostridium acetobutylicum EA 2018] Length = 206 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 49/207 (23%), Positives = 76/207 (36%), Gaps = 26/207 (12%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 EL + C L + + LM +G P ++ G+PF G+ G +L Sbjct: 4 WRELYNECIECQKCRLGENRTNMVFGEGNPEAKLMFVGEAPGADEDRLGRPFVGRAGQLL 63 Query: 137 DKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 K L ++ + R +I+ + P NR E E C P + Q LI PKIL+ +G+ Sbjct: 64 TKGLTALNLSRDRDYYIANVCKCRPEKNRTPYEDEAEACMPYLRNQFALIKPKILVCLGS 123 Query: 196 KTKNFFF---------------------NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHP 234 F N + ++ GKW + I +AT HP Sbjct: 124 TAMKFIMEPALNKILQQNNTIEEENLIWKNGQMRITRDRGKWLKV----KGIYMMATFHP 179 Query: 235 QELIQYPLIKKNTWHALITLKKALKNL 261 L + K W L +K +L Sbjct: 180 AALFRDENKKTAFWEDLKLIKAKYVDL 206 >gi|289548718|ref|YP_003473706.1| phage SPO1 DNA polymerase-related protein [Thermocrinis albus DSM 14484] gi|289182335|gb|ADC89579.1| phage SPO1 DNA polymerase-related protein [Thermocrinis albus DSM 14484] Length = 217 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 81/190 (42%), Gaps = 2/190 (1%) Query: 71 AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130 ++K +L EL + + C S + ++ +G P + ++ +PF G Sbjct: 29 SEKKMALAELYRTMEAEGRCVRYEGSNGYVLGEGNPCSPVIFVGEAPGEEEDRQRRPFVG 88 Query: 131 KTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 + G L+ L+ + + R ++I+ + PPGNR + E+ C + ++IE+I PK++ Sbjct: 89 RAGQYLNAKLEEVGLRRQDVYITNVVKSRPPGNRTPTAQEIASCVSYLRKEIEIIKPKVI 148 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 + +G+ + G+ S I L T HP +++ P + Sbjct: 149 VCLGSTALEGVMGRK-MPVTKARGQIFTYPF-DSGIKVLLTYHPAYVLRNPSADREFTQD 206 Query: 251 LITLKKALKN 260 L L + L + Sbjct: 207 LKKLLEILSS 216 >gi|302348684|ref|YP_003816322.1| Uracil-DNA glycosylase [Acidilobus saccharovorans 345-15] gi|302329096|gb|ADL19291.1| Uracil-DNA glycosylase [Acidilobus saccharovorans 345-15] Length = 213 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 36/190 (18%), Positives = 76/190 (40%), Gaps = 3/190 (1%) Query: 66 QADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISG 125 S+ K S ++ +R+ C L + + +M++G P +++ G Sbjct: 2 SPVSLDNKKASYDDIAERVRNCKACPLHRLRTNAVPGEGNLSAKIMLVGEAPGKNEDEQG 61 Query: 126 KPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELI 185 +PF G G +L +L+ + R ++I+ + PP NR + E+ C + +I L+ Sbjct: 62 RPFVGAAGQLLSSLLEQAGLRRQDVYITNVVKCRPPNNRTPTEDEVAACIGFLKEEISLV 121 Query: 186 SPKILLFIGNKTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL 242 PK+++ +GN + + G+ + + + T HP + P Sbjct: 122 RPKVIVALGNTAGSALMSLAGKQWRGVTAERGRKVKVSIGGVELTVIPTYHPAAALYKPD 181 Query: 243 IKKNTWHALI 252 +K + Sbjct: 182 LKDYLAKDIK 191 >gi|332654096|ref|ZP_08419840.1| arginine biosynthesis bifunctional protein ArgJ [Ruminococcaceae bacterium D16] gi|332517182|gb|EGJ46787.1| arginine biosynthesis bifunctional protein ArgJ [Ruminococcaceae bacterium D16] Length = 188 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 6/187 (3%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 EL+ S C L T + + T ++M+IG P +++++ G PF G+ G + Sbjct: 2 DWKELEQECLSCQKCALSQTRHNVVFGTGPRDAEVMLIGEGPGENEDLQGLPFVGRGGKL 61 Query: 136 LDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 LD ML+ I++ R + +I+ + PP NR+ N E + C + Q+ LI PKI++ +G Sbjct: 62 LDDMLEVIDLSREKNVYIANMVKCRPPQNRDPLNTEQDACIGYLRNQVALIRPKIIVCLG 121 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 D K + G+W S + +A HP +++ P + T+ L L Sbjct: 122 RIAAMRLIKPD-FKITKEHGQWFE----KSGVQMMALFHPAAILRDPRRRPETFEDLKRL 176 Query: 255 KKALKNL 261 + ++ + Sbjct: 177 QAKIQEI 183 >gi|294505841|ref|YP_003569899.1| DNA polymerase-related protein,bacteriophage-type [Salinibacter ruber M8] gi|294342169|emb|CBH22947.1| DNA polymerase-related protein,bacteriophage-type [Salinibacter ruber M8] Length = 287 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 5/213 (2%) Query: 49 AIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQ 108 + + + D+ + A +L E++ + + + Sbjct: 76 PAEDPSLPPPERIEALIPDDAPYKDADTLEEVEQYFADNVLVPIDEDRENPVFGVGDPEA 135 Query: 109 DLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSN 168 DL+IIG P +++ G+PF G+ G +LDK+L +I R ++I+ I PP NRN + Sbjct: 136 DLVIIGEAPGRNEDEEGEPFVGRAGQLLDKILDAINFEREDVYITNILKSRPPRNRNPKS 195 Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT 228 E++ P++ +QI L+ PKI+L +G N + +L + IP Sbjct: 196 EEIDAHLPVLYKQIALLRPKIILTVGKVAGNTLLDR-----SSSLSNLRDQEHDFYGIPL 250 Query: 229 LATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 +AT HP L++ K+ TW + L+ L Sbjct: 251 MATYHPAALLRNSQWKRPTWEDVKLLRTRYDQL 283 >gi|126180274|ref|YP_001048239.1| phage SPO1 DNA polymerase-related protein [Methanoculleus marisnigri JR1] gi|125863068|gb|ABN58257.1| phage SPO1 DNA polymerase-related protein [Methanoculleus marisnigri JR1] Length = 219 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 43/193 (22%), Positives = 85/193 (44%), Gaps = 3/193 (1%) Query: 71 AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130 A ++ EL +++ C L + + DLM+IG P ++++G+PF G Sbjct: 19 AGGEAAIEELAAVIGECRKCLLWENTHHAVPGEGNPRADLMLIGEAPGKQEDLTGRPFVG 78 Query: 131 KTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 + G +L+ +L I + R + I+ I PPGNR+ E+ C P + QI +I PK++ Sbjct: 79 RAGKLLEGLLSGIGLSRDDVFIANIVKHRPPGNRDPGEEEIRACTPYLEEQIRIIGPKVI 138 Query: 191 LFIGNKTKN---FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247 + +G + F + + + G + + T+HP + P +++ Sbjct: 139 VMLGRHSSRYILSFLPVEFDRITEIRGTVYPGLLFGHPVRLIPTLHPAAALYNPRYRESL 198 Query: 248 WHALITLKKALKN 260 + + + L Sbjct: 199 EEDFLIIGRELAE 211 >gi|295100441|emb|CBK97986.1| uracil-DNA glycosylase, family 4 [Faecalibacterium prausnitzii L2-6] Length = 188 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 47/187 (25%), Positives = 82/187 (43%), Gaps = 6/187 (3%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 LK+ + C L +T + + E +++ +G P S++ G PF G++G + Sbjct: 2 DWETLKTDCLACQRCPLHTTRHNVVFGQGVENAEVLFVGEGPGQSEDEQGLPFVGRSGQL 61 Query: 136 LDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 LDK L +I++ R + +I+ I PP NR+ E E C P + Q L+ PKI++ +G Sbjct: 62 LDKYLFAIDLDRASNCYIANIVKCRPPQNRDPLPAESEACMPWLREQFRLLRPKIVVCLG 121 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 D T K + I + T HP L++ P K + + L Sbjct: 122 RIAAQRMIRADFSVT-----KEHGTFIEKNGILFMGTFHPAALLRQPQNKPEAFGDFVAL 176 Query: 255 KKALKNL 261 + + + Sbjct: 177 RDKIHEV 183 >gi|83816180|ref|YP_444183.1| uracil-DNA glycosylase [Salinibacter ruber DSM 13855] gi|83757574|gb|ABC45687.1| uracil-DNA glycosylase, family 4 [Salinibacter ruber DSM 13855] Length = 287 Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats. Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 5/213 (2%) Query: 49 AIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQ 108 + + + D+ + A +L E++ + + + Sbjct: 76 PAEDPSLPPPERIEALIPDDAPYKDADTLEEVEQYFADNVLVPIDEDRENPVFGVGDPEA 135 Query: 109 DLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSN 168 DL+IIG P +++ G+PF G+ G +LDK+L +I R ++I+ I PP NRN + Sbjct: 136 DLVIIGEAPGRNEDEEGEPFVGRAGQLLDKILDAINFEREDVYITNILKSRPPRNRNPKS 195 Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT 228 E++ P++ +QI L+ PKI+L +G N + +L + IP Sbjct: 196 EEIDAHLPVLYKQIALLRPKIILTVGKVAGNTLLDR-----SSSLSNLRDQEHDFYGIPL 250 Query: 229 LATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 +AT HP L++ K+ TW + L+ L Sbjct: 251 MATYHPAALLRNSQWKRPTWEDVKLLRTRYDQL 283 >gi|163782570|ref|ZP_02177567.1| N-terminus of phage SPO1 DNA polymerase [Hydrogenivirga sp. 128-5-R1-1] gi|159882143|gb|EDP75650.1| N-terminus of phage SPO1 DNA polymerase [Hydrogenivirga sp. 128-5-R1-1] Length = 220 Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 73/178 (41%), Gaps = 3/178 (1%) Query: 82 SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 + C L + ++ +G P + ++ G+PF G+ G L+K ++ Sbjct: 43 DSFKDCAKCELHRNRTQVVFGDGNPYSPVVFVGEAPGEDEDRQGRPFVGRAGKYLNKKIE 102 Query: 142 SI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF 200 + + R +++I+ + PPGNR + E+ C P + ++I++I PK++ +G Sbjct: 103 EVLGLRREEVYITNVCKCRPPGNRKPTPAEISACFPYLKKEIDIIKPKVICCLGATAGEG 162 Query: 201 FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 + GK I L T HP +++ P + LK+ + Sbjct: 163 ILG-KKLSITKVRGKNVPYPYDP-SITVLLTYHPAYILRNPRADGEFTEDMERLKELI 218 >gi|300871218|ref|YP_003786091.1| uracil DNA glycosylase [Brachyspira pilosicoli 95/1000] gi|300688919|gb|ADK31590.1| uracil DNA glycosylase [Brachyspira pilosicoli 95/1000] Length = 236 Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats. Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 6/190 (3%) Query: 73 KACSLHELKSLLRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 K L +L + C LCST + + E D++ +G P ++ G PF G+ Sbjct: 51 KNEELKKLYQTITKCMKCEALCSTRKNVVFGRGDEKPDIVFVGEAPGADEDKLGFPFVGR 110 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191 G +LDK ++ + I +I PP NR+ E + CR +Q+E+++PKI+ Sbjct: 111 AGKLLDKWIEKLNIS--NYYIMNALKCRPPENRDPLLEEKDNCREFFTKQLEILNPKIIC 168 Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 +G + + D + GK N ++ IP +AT HP +++ + L Sbjct: 169 ALGRHGFSNLVDFDLKT---PFGKVRNNIHYYNNIPVIATYHPAYILRNQKEEIKVIEDL 225 Query: 252 ITLKKALKNL 261 + + L+ L Sbjct: 226 EFMMRELEKL 235 >gi|254432687|ref|ZP_05046390.1| bacteriophage-type DNA polymerase N-terminal domain protein [Cyanobium sp. PCC 7001] gi|197627140|gb|EDY39699.1| bacteriophage-type DNA polymerase N-terminal domain protein [Cyanobium sp. PCC 7001] Length = 243 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 53/237 (22%), Positives = 88/237 (37%), Gaps = 12/237 (5%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P T E+ + + + + + L + + + C Sbjct: 2 PPPPTTGETGQPDLFGPLTPSAGPSAGPASGSGLPAV----EPDLDLAGVAAACAACRRC 57 Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM-RTQ 149 L +T + + LM+IG P ++ SG+PF G+ G +LD+ML S+ I Sbjct: 58 GLAATRQHVVVSRGDPAARLMVIGEGPGAQEDASGQPFVGRAGQLLDQMLASVGIDSNRD 117 Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209 +I + PP NR + EM CRP + RQI+L P ++L G Sbjct: 118 AYICNVVKCRPPENRKPTPAEMAACRPWLDRQIQLNDPAVILLAGATAMEGVLGVKG-GI 176 Query: 210 YQNLGKWSNLCTPHS-IIPTLATVHPQELIQYPLI-----KKNTWHALITLKKALKN 260 + G+W P + HP L++ P K TW L +++ L Sbjct: 177 TRLRGQWRQGSGPVLAGRWLMPIFHPSYLLRNPSRQSGSPKWLTWQDLQDVRRRLDQ 233 >gi|116327183|ref|YP_796903.1| Uracil-DNA glycosylase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116332165|ref|YP_801883.1| Uracil-DNA glycosylase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116119927|gb|ABJ77970.1| Uracil-DNA glycosylase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125854|gb|ABJ77125.1| Uracil-DNA glycosylase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 202 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 45/198 (22%), Positives = 91/198 (45%), Gaps = 16/198 (8%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 +K L ++S + + C L +T T+ ++ IG P ++++G+PF G+ Sbjct: 5 EKLRRLDLIQSEVFACKLCKLHTTRTRTVFGEGNPDSKVVFIGEGPGKQEDLTGRPFVGR 64 Query: 132 TGNMLDKMLQS-IEIMRTQIHISMISPWHP------PGNRNLSNIEMEICRPIIMRQIEL 184 G +L ++++ +++ R ++I+ I P +R + E C P ++RQ+E+ Sbjct: 65 AGELLTRIIEKGMKVPRESVYIANIVKCRPTVDMKFEKDRPPEDEETRACAPYLLRQLEI 124 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL-- 242 I PK+++ +GN + F N + + G W IP + T HP +I+ Sbjct: 125 IQPKVIVTLGNPSTRFILNTK-EGITKLRGTWGTFF----GIPVMPTYHPSFVIRNGGEN 179 Query: 243 --IKKNTWHALITLKKAL 258 +K+ W + + L Sbjct: 180 SPLKREVWEDIKKVMDLL 197 >gi|217967775|ref|YP_002353281.1| phage SPO1 DNA polymerase-related protein [Dictyoglomus turgidum DSM 6724] gi|217336874|gb|ACK42667.1| phage SPO1 DNA polymerase-related protein [Dictyoglomus turgidum DSM 6724] Length = 210 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 75/190 (39%), Gaps = 5/190 (2%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 K L L+ +C L + + +M +G P ++ GKPF G Sbjct: 5 NKVGKLEILRREAEGCRNCSLWQERTNLVFGEGNPDAFIMFVGEAPGFHEDQQGKPFVGA 64 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191 G +L ++++SI + R ++I+ + PP NR E+ +C P + +QIE+I+PKI+ Sbjct: 65 AGKLLTELIESIGLKREDVYIANVLKCRPPNNREPLPEEIRVCFPFLRQQIEIINPKIIC 124 Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 +G + + T HP + + + +N Sbjct: 125 TLGRYAAYAILGHSVNISTS-----HGKDYYVDGRRVFVTYHPAAALYHGKLLENIKKDF 179 Query: 252 ITLKKALKNL 261 LK+ + + Sbjct: 180 EKLKELYEAV 189 >gi|113955244|ref|YP_730877.1| uracil-DNA glycosylase [Synechococcus sp. CC9311] gi|113882595|gb|ABI47553.1| Uracil-DNA glycosylase [Synechococcus sp. CC9311] Length = 201 Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 46/190 (24%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 SL +LK+ C L + + LM+IG P ++ G+PF G++G + Sbjct: 4 SLEDLKASCLQCQRCDLAKERKHVVVSRGHPSARLMVIGEAPGADEDAQGRPFVGRSGRL 63 Query: 136 LDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 LD L + + + +I + PPGNR + E++ CRP + RQI ++P+IL +G Sbjct: 64 LDACLTEVGLDQADDTYICNLIKCRPPGNRRPTPAELKACRPWLDRQILEVNPEILFILG 123 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK-----NTWH 249 + G W+ + + HP L++ P + Sbjct: 124 ATATATLLECRT-PISRLRGHWTEWKGRC----VMPSFHPSYLLRNPSREPGKPHSLFMA 178 Query: 250 ALITLKKALK 259 L +K AL Sbjct: 179 DLTHVKHALN 188 >gi|254172784|ref|ZP_04879458.1| uracil-DNA glycosylase [Thermococcus sp. AM4] gi|214032940|gb|EEB73768.1| uracil-DNA glycosylase [Thermococcus sp. AM4] Length = 194 Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 43/188 (22%), Positives = 84/188 (44%), Gaps = 3/188 (1%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 + +L+ +R+ C L + + + + +M +G P ++ G PF G+ G +L Sbjct: 7 MKKLEERIRNCRKCPLGQLRTNAVPGSGSYDAKVMFVGEAPGYWEDQKGLPFVGRAGKVL 66 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 D++L I + R ++I+ I PP NRN + E+ C P + QI++I P++++ +G Sbjct: 67 DELLAGIGLSRDDVYITNIVKCRPPENRNPTEEEIRACSPYLDMQIDIIRPRVIVPLGRH 126 Query: 197 TKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253 + + + + + GK T I + HP + P +++ Sbjct: 127 SMGYILRKFGFEPEPISKIHGKVFRANTLFGRILIMPMYHPAAALYKPPLREELRKDFEK 186 Query: 254 LKKALKNL 261 L K L L Sbjct: 187 LGKILNEL 194 >gi|254443722|ref|ZP_05057198.1| uracil-DNA glycosylase, family 4, putative [Verrucomicrobiae bacterium DG1235] gi|198258030|gb|EDY82338.1| uracil-DNA glycosylase, family 4, putative [Verrucomicrobiae bacterium DG1235] Length = 305 Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats. Identities = 57/276 (20%), Positives = 102/276 (36%), Gaps = 26/276 (9%) Query: 3 SKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKS-------IDSAIQPITN 55 S+ +S I + D GV E + E R + D++ + Sbjct: 21 SRVNVSDSAIQALRKRSVDKGVDTSTREAVLSSIPERVRSADAKDFDKVFTDTSTETKRA 80 Query: 56 IRHIHSPLVQQADSI----AQKACSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQD 109 P + +A + K L+ + C L + + D Sbjct: 81 ASQSGGPKLPRAPLVNLVKGDKQAQWEALREQVMGCVVCKGRLKEG-KKLVFGSGNLDAD 139 Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP-----PGNR 164 + G P D +G PFSG G++L KM+ ++ + R ++I+ I W P G R Sbjct: 140 IFFCGEAPGIEDEDTGVPFSGPAGDLLGKMIGAMGLKRGDVYIADIMNWRPEASTERGKR 199 Query: 165 NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQ-NLGKWSNLCTPH 223 + EM C P + Q+E++ PK+++ +G K + G+W+ Sbjct: 200 PPTVEEMNFCMPYLKGQLEIVQPKLIVALGATAVKGLLGAANVKNLRDVKGQWTEFA--- 256 Query: 224 SIIPTLATVHPQELIQYPLI--KKNTWHALITLKKA 257 +P L T HP LI+ K++ W + + + Sbjct: 257 -GVPMLPTYHPSYLIRNDTKRDKRSAWEDWLKVMEK 291 >gi|330837396|ref|YP_004412037.1| phage SPO1 DNA polymerase-related protein [Spirochaeta coccoides DSM 17374] gi|329749299|gb|AEC02655.1| phage SPO1 DNA polymerase-related protein [Spirochaeta coccoides DSM 17374] Length = 289 Score = 158 bits (400), Expect = 6e-37, Method: Composition-based stats. Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 8/187 (4%) Query: 73 KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD-LMIIGYTPSDSDNISGKPFSGK 131 +CSL EL +L+ S +C LC T T+ E +M+IG P +++SG+PF GK Sbjct: 95 SSCSLKELSTLVSSCKNCRLCETRTYTVFGEGQEEHPVVMVIGEGPGRDEDLSGRPFVGK 154 Query: 132 TGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 G +D+ I + R +I+ I PPGNR+ E++ C P + RQI L+ P+++ Sbjct: 155 GGQYMDRWFAPIGVSRQTNAYIANIVKCRPPGNRDPLPDEVQACIPYLRRQIALVQPRVI 214 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL-IKKNTWH 249 L G + G + IP + T HP +++ ++ W Sbjct: 215 LLAGAVAAHAILETKEGV-----GALRGRTFSYMNIPVIVTYHPAGVLRNLDRLRAPVWE 269 Query: 250 ALITLKK 256 + L Sbjct: 270 DMKRLAS 276 >gi|329902871|ref|ZP_08273281.1| putative DNA polymerase-like protein, bacteriophage-type protein [Oxalobacteraceae bacterium IMCC9480] gi|327548581|gb|EGF33241.1| putative DNA polymerase-like protein, bacteriophage-type protein [Oxalobacteraceae bacterium IMCC9480] Length = 289 Score = 158 bits (400), Expect = 6e-37, Method: Composition-based stats. Identities = 47/197 (23%), Positives = 80/197 (40%), Gaps = 8/197 (4%) Query: 69 SIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128 + A S EL+ + S C LC + + + +G P ++ G+PF Sbjct: 90 AAAIARMSWQELELAVASCTRCALCKNRKQAVLGAGDQKPGWLFVGEGPGHVEDQQGEPF 149 Query: 129 SGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPG----NRNLSNIEMEICRPIIMRQIE 183 G G +LD ML ++++ R +++ P G +R S E CRP + RQI Sbjct: 150 VGPAGKLLDNMLLALDLPRGENNYLANAVKCRPVGADGKDRPPSADESAACRPYLERQIA 209 Query: 184 LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI 243 L+ P +++ +G D + + IP + T HP L++ PL Sbjct: 210 LLQPAVIVALGKVAALSLLGGDPKIAVAA---LREHTHRYGSIPVVVTYHPAYLLRKPLD 266 Query: 244 KKNTWHALITLKKALKN 260 K +W L +A + Sbjct: 267 KAKSWRDLCLAAQAYAS 283 >gi|221195029|ref|ZP_03568085.1| uracil-DNA glycosylase, family 4 [Atopobium rimae ATCC 49626] gi|221184932|gb|EEE17323.1| uracil-DNA glycosylase, family 4 [Atopobium rimae ATCC 49626] Length = 226 Score = 158 bits (399), Expect = 8e-37, Method: Composition-based stats. Identities = 48/188 (25%), Positives = 78/188 (41%), Gaps = 5/188 (2%) Query: 73 KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 + +L E++ +R C LC + + +M IG P ++++ G+PF G Sbjct: 10 SSVTLEEVREQMRDCRLCRLCEGRNTIVFGDGNPHARVMFIGEGPGKNEDLGGRPFIGAA 69 Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192 G LD L + + R I I+ + PP NRN E+E C P + Q+ I P ++ Sbjct: 70 GKKLDGYLAAAGLSRDDIFITNVVKCRPPSNRNPRPEEIEACAPYLRNQVRAIWPDAIVC 129 Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 +GN F + G+ T H + L T HP I +P + L Sbjct: 130 LGNFASQFIL-RTEKGVTSLRGRL--YQTGHFV--VLPTFHPAATIYHPAWEPLLTDDLR 184 Query: 253 TLKKALKN 260 L + L+ Sbjct: 185 LLGQWLQE 192 >gi|187735611|ref|YP_001877723.1| phage SPO1 DNA polymerase-related protein [Akkermansia muciniphila ATCC BAA-835] gi|187425663|gb|ACD04942.1| phage SPO1 DNA polymerase-related protein [Akkermansia muciniphila ATCC BAA-835] Length = 305 Score = 157 bits (398), Expect = 9e-37, Method: Composition-based stats. Identities = 51/220 (23%), Positives = 92/220 (41%), Gaps = 14/220 (6%) Query: 49 AIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFH-DCHLCSTSLSTICATQTEG 107 +P P L L++L +++ L S + + AT Sbjct: 76 KPEPPELFPQNREPASAITLPEGTMEDKLQYLRNLAQNWKPARELNSLRDTMVFATGNPH 135 Query: 108 QDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP------P 161 LM+IG P + + +PF G+ G L+++L+++ + R ++IS I + P Sbjct: 136 TKLMLIGEAPGYYEEVQQEPFVGRAGEKLNQILRAMGLSRDMVYISNIVKFRPALPNQRT 195 Query: 162 GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221 NR + E+E C PIIM +I +I PK+++ +G G++ +L Sbjct: 196 NNRAPTPEEIEACLPIIMHEIRVIQPKMIVALGGTAAVGLLGEQGSV-SSMRGRFHDLN- 253 Query: 222 PHSIIPTLATVHPQELIQ--YPLIKKNTWHALITLKKALK 259 IP T HP L++ P K+ W ++ + + L Sbjct: 254 ---GIPVRVTYHPSYLLRSDSPREKRKVWEDMLAVMERLD 290 >gi|45656446|ref|YP_000532.1| uracil-DNA glycosylase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|294828371|ref|NP_713848.2| uracil-DNA glycosylase [Leptospira interrogans serovar Lai str. 56601] gi|45599681|gb|AAS69169.1| uracil-DNA glycosylase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|293386223|gb|AAN50866.2| uracil-DNA glycosylase [Leptospira interrogans serovar Lai str. 56601] Length = 218 Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 16/198 (8%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 +K L ++S + + C L +T T+ +L+ IG P ++++G+PF GK Sbjct: 20 EKLKRLGLMQSEVSACKLCKLETTRTQTVFGEGNPDAELVFIGEGPGKQEDLTGRPFVGK 79 Query: 132 TGNMLDKMLQS-IEIMRTQIHISMISPWHP------PGNRNLSNIEMEICRPIIMRQIEL 184 G +L ++++ + + R ++I+ I P +R E C P ++RQ+E+ Sbjct: 80 AGELLTRIIEKGMGVPRESVYIANIVKCRPTVDMKFEKDRPPEEEETRACAPYLLRQLEI 139 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL-- 242 I PK ++ +GN + F N + + G W IP + T HP +I+ Sbjct: 140 IQPKAIVTLGNPSTRFILNTK-EGITKLRGTW----GSFFGIPVMPTYHPSFVIRNGGEN 194 Query: 243 --IKKNTWHALITLKKAL 258 +K++ W + + L Sbjct: 195 SPLKRDVWEDIKKVMDLL 212 >gi|182415672|ref|YP_001820738.1| phage SPO1 DNA polymerase-related protein [Opitutus terrae PB90-1] gi|177842886|gb|ACB77138.1| phage SPO1 DNA polymerase-related protein [Opitutus terrae PB90-1] Length = 327 Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 47/243 (19%), Positives = 91/243 (37%), Gaps = 23/243 (9%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRS---F 87 + T +++ P+ I +P KA L+ + + Sbjct: 76 EPDRGTVTPPVGDRAPAETEAPVARAATIPAPKPFTLPE-GDKAARFAALREHVLADAVC 134 Query: 88 HDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR 147 C + + +M +G P + I G+PF G G +L KM+ ++ + R Sbjct: 135 --CAHVRPGKKVVLGVGSLEAKIMFVGEAPGAEEEIQGEPFVGPAGQLLTKMIGAMGLRR 192 Query: 148 TQIHISMISPWHP----------PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197 +++I I W P GNR + EM C P + QIE+++P++L+ +G+ Sbjct: 193 DEVYIGNIMNWRPEMPVSASGVQYGNRPPNGEEMNYCLPYLRAQIEIVNPEVLVALGSTA 252 Query: 198 KNFFFNN-DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI--KKNTWHALITL 254 + + G+W P + T HP +++ K+ W L+ + Sbjct: 253 AQGLLGIGSFKALGEVRGRWHTFADK----PLMVTYHPSYILRNQSNRSKRMIWEDLLKV 308 Query: 255 KKA 257 + Sbjct: 309 MER 311 >gi|40063236|gb|AAR38063.1| phage SPO1 DNA polymerase-related protein [uncultured marine bacterium 577] Length = 236 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 52/212 (24%), Positives = 90/212 (42%), Gaps = 8/212 (3%) Query: 52 PITNIRHIHSPLVQQADSIAQKA--CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD 109 P+ + S V + + + +L+ + C L T+ + D Sbjct: 25 PVNILAKTPSSSVTKKEDRGSQILRSDWVQLEENVVGCTSCSLFQDRTKTVFGAGDKNAD 84 Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSN 168 + IG PS ++ G+P G +G +LD ML+++ + R I+I+ P G+R+ N Sbjct: 85 WLFIGDVPSTEEDTQGEPLIGLSGELLDNMLEAVSLKRGGNIYIANTVKCRPSGDRSPDN 144 Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT 228 E + C P ++RQIELI PK+++ +G A G+ S IP Sbjct: 145 SEEQQCEPFLIRQIELIKPKLIIVLGEIAAQNLLGTSATIDS-LRGRLHEY----SSIPL 199 Query: 229 LATVHPQELIQYPLIKKNTWHALITLKKALKN 260 + T HP L+Q K+ W L + ++ Sbjct: 200 IVTYHPAYLLQIQSDKEKVWQDLCFARNIMQK 231 >gi|41615161|ref|NP_963659.1| hypothetical protein NEQ372 [Nanoarchaeum equitans Kin4-M] gi|40068885|gb|AAR39220.1| NEQ372 [Nanoarchaeum equitans Kin4-M] Length = 198 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 3/188 (1%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 EL+ + + C L + + + + D++ IG P + ++ GKPF G+ G + Sbjct: 2 DWEELEKQILNCKKCPLYKYARNKVIGDGNKNSDIVFIGEAPGEEEDKQGKPFVGRAGQL 61 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 L+K+L+ I + R QI+I+ + PP NR+ E+E C+P ++ Q++LI P ++ +G Sbjct: 62 LNKLLEKIGLTRDQIYITNVLKCRPPNNRDPKEEEIEACKPYLVIQLDLIKPTYIVTLGR 121 Query: 196 KTKNF---FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 F + GK + + I+ T+HP + + Sbjct: 122 FATKEIFDLFGLKFSSITKVRGKPYYVRRWNKIVTIFPTLHPAAALYHTKYLPIIEQDFE 181 Query: 253 TLKKALKN 260 LK+ + N Sbjct: 182 KLKEIISN 189 >gi|28210008|ref|NP_780952.1| DNA polymerase [Clostridium tetani E88] gi|28202443|gb|AAO34889.1| DNA polymerase, bacteriophage-type [Clostridium tetani E88] Length = 188 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 6/186 (3%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 EL + + + C L + D+M IG P ++ +G+PF G+ G L Sbjct: 4 WKELHNNCLACNKCDLSKNRTHMVFGEGNSKADIMFIGEAPGGDEDKTGRPFVGRAGQFL 63 Query: 137 DKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 KML S++++R +I I P NRN E++ C P + Q L+ P+I++ +G Sbjct: 64 TKMLNSLDLIRERDYYICNICKCRPENNRNPKEDEIKACIPYLRNQFALVQPRIIVCLGA 123 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 N ++ + ++ GKW AT HP +++ K+ + L +K Sbjct: 124 IATNQIISDQW-RITRDRGKW----IKRKGCFITATFHPAAVLRDEGKKQYIFRDLQEVK 178 Query: 256 KALKNL 261 KA ++L Sbjct: 179 KAYESL 184 >gi|296241955|ref|YP_003649442.1| phage SPO1 DNA polymerase-like protein [Thermosphaera aggregans DSM 11486] gi|296094539|gb|ADG90490.1| phage SPO1 DNA polymerase-related protein [Thermosphaera aggregans DSM 11486] Length = 202 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 79/183 (43%), Gaps = 4/183 (2%) Query: 83 LLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142 +++ C L ++T+ +++IG P ++ G PF G G +L+ +L++ Sbjct: 13 EIQNCKKCRLHENRINTVPGEGPLTAKVVLIGEAPGRKEDEVGSPFVGPAGRLLNTLLEN 72 Query: 143 IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202 + R ++ I+ I PPGNR E+ C + RQ+ LI P++L+ +GN + Sbjct: 73 SGLKREEVFITNIVKCRPPGNRKPRRDEISQCLGYLGRQLRLIKPRVLILLGNTAAETIY 132 Query: 203 ---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL-ITLKKAL 258 + ++ GK + ++ T HP + P ++ +K + Sbjct: 133 GLSGVEWHGMMRDHGKIFEINVYGVKTISIPTFHPAAALYNPRLRTILLEDFTKVVKPVI 192 Query: 259 KNL 261 + L Sbjct: 193 EEL 195 >gi|294102554|ref|YP_003554412.1| phage SPO1 DNA polymerase-related protein [Aminobacterium colombiense DSM 12261] gi|293617534|gb|ADE57688.1| phage SPO1 DNA polymerase-related protein [Aminobacterium colombiense DSM 12261] Length = 189 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 43/185 (23%), Positives = 79/185 (42%), Gaps = 6/185 (3%) Query: 80 LKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKM 139 L+ + C LC + +M++G P +++ +G+PF G++GN+L ++ Sbjct: 6 LRQRIEVCEKCELCGMRQQPVIGEGLAECRVMLVGEAPGATEDETGRPFVGRSGNLLCQL 65 Query: 140 LQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199 ++ + R I+ + PP NR + E++ CRP + QI L+SP +++ GN Sbjct: 66 IEEAGLSREFFFITNMVKCRPPENRKPTKDELDACRPFLEEQIRLLSPLLIVTAGNTPTQ 125 Query: 200 FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK-----NTWHALITL 254 +F N G++ I HP L++ +K T L + Sbjct: 126 WFLNTRKGV-TALRGQYYPWDFEGRKIKIRPLFHPSYLLRNRSREKGRPLHQTLCDLREI 184 Query: 255 KKALK 259 LK Sbjct: 185 ASFLK 189 >gi|257438681|ref|ZP_05614436.1| uracil-DNA glycosylase [Faecalibacterium prausnitzii A2-165] gi|257198865|gb|EEU97149.1| uracil-DNA glycosylase [Faecalibacterium prausnitzii A2-165] Length = 188 Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 44/187 (23%), Positives = 81/187 (43%), Gaps = 6/187 (3%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 LK+ + C LC+ + + +++ +G P S++ G PF G++G + Sbjct: 2 DWDTLKAECLACRRCELCTDRTHVVFGQGVQTAEVLFVGEGPGQSEDEQGLPFVGRSGQL 61 Query: 136 LDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 LDK L +I++ R +I+ I PP NR+ E E C P + Q +L+ PKI++ +G Sbjct: 62 LDKYLFAIDLDRSKNCYIANIVKCRPPQNRDPLPTESEACMPWLREQFKLLQPKIVVCLG 121 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 D T K + + + T HP L++ K + + L Sbjct: 122 RIASQRMIRTDFSVT-----KEHGTFVQKNGVWFMGTFHPAALLRQAQNKPAAFADFVAL 176 Query: 255 KKALKNL 261 ++ + + Sbjct: 177 REKIHEV 183 >gi|269925911|ref|YP_003322534.1| phage SPO1 DNA polymerase-related protein [Thermobaculum terrenum ATCC BAA-798] gi|269789571|gb|ACZ41712.1| phage SPO1 DNA polymerase-related protein [Thermobaculum terrenum ATCC BAA-798] Length = 219 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 44/188 (23%), Positives = 84/188 (44%), Gaps = 6/188 (3%) Query: 73 KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 + SL + S +R C L +T + + +M IG P +++ G+PF G Sbjct: 8 REDSLELIASEVRKCTKCPLSATRTNAVPGEGNPSAQIMFIGEGPGFNEDRQGRPFVGAA 67 Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192 G L+++LQS+ + R + I+ + PPGNR+ E++ C + RQIELI P +++ Sbjct: 68 GAFLNELLQSVGLRREDVFITNVVKCRPPGNRDPLPEEIQACSCYLDRQIELIKPAVIVT 127 Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 +G + +F N+ + + + HP + P +K+ + Sbjct: 128 LGRYSMARYFPNERIS------RIHGQPRRIGDLTVVPLFHPAAALHQPALKETSISDFK 181 Query: 253 TLKKALKN 260 + K ++ Sbjct: 182 KIPKIVEE 189 >gi|257792514|ref|YP_003183120.1| phage SPO1 DNA polymerase-like protein [Eggerthella lenta DSM 2243] gi|317490382|ref|ZP_07948866.1| uracil-DNA glycosylase, family 4 [Eggerthella sp. 1_3_56FAA] gi|325833538|ref|ZP_08165987.1| uracil-DNA glycosylase A [Eggerthella sp. HGA1] gi|257476411|gb|ACV56731.1| phage SPO1 DNA polymerase-related protein [Eggerthella lenta DSM 2243] gi|316910517|gb|EFV32142.1| uracil-DNA glycosylase, family 4 [Eggerthella sp. 1_3_56FAA] gi|325485462|gb|EGC87931.1| uracil-DNA glycosylase A [Eggerthella sp. HGA1] Length = 211 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 76/183 (41%), Gaps = 5/183 (2%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L E+++ + C L T+ +MIIG P ++++ G+PF G G L Sbjct: 8 LDEIRAQVEGCRKCPLADGRTQTVFGVGNPEARVMIIGEAPGKNEDLQGEPFVGAAGKYL 67 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 +++L ++R + I+ + PPGNR+ E+E+C P + Q I P+ L+ +GN Sbjct: 68 NELLAVAGLVREDVFIANVLKCRPPGNRDPRPEEIELCTPYLREQTRTIDPEFLVTLGNF 127 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 + F D T + HP + ++ + TL + Sbjct: 128 STKFILKTDIGIT-----RLHGTVQRAGKFKVFPIFHPAAALYDGSKREALENDFATLGE 182 Query: 257 ALK 259 L+ Sbjct: 183 LLR 185 >gi|171186390|ref|YP_001795309.1| phage SPO1 DNA polymerase-related protein [Thermoproteus neutrophilus V24Sta] gi|170935602|gb|ACB40863.1| phage SPO1 DNA polymerase-related protein [Thermoproteus neutrophilus V24Sta] Length = 190 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 77/178 (43%), Gaps = 3/178 (1%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 + L +R C L + + +M++G P +++ G+PF G G++L Sbjct: 1 MEALHDAIRRCTKCPLHLHRRNAVPGEGRARLGVMVVGEAPGAAEDAEGRPFVGAAGSLL 60 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 K L + + R ++I+ + PP NR + E+E C P +++QIEL+ P+ +L +G Sbjct: 61 TKTLAKLGVSRDDLYITNVVKCRPPNNRTPTREEVEACLPYLLKQIELVKPRRVLALGLV 120 Query: 197 TKNFFFNNDAQKTYQ---NLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 + ++ + G+ + T HP +++ P ++ L Sbjct: 121 SAKALLGLIGREVEKVGEVRGRCFPGRISGVELEVCVTYHPAAVLRNPNLRGRFEGDL 178 >gi|221632240|ref|YP_002521461.1| phage DNA polymerase-like protein [Thermomicrobium roseum DSM 5159] gi|221155463|gb|ACM04590.1| phage DNA polymerase-related protein [Thermomicrobium roseum DSM 5159] Length = 230 Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 75/184 (40%), Gaps = 6/184 (3%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L + +R C L T + ++M IG P ++ G+PF G G L Sbjct: 29 LESIAERVRHCTRCDLWRTRTQAVPGEGDPHAEVMFIGEAPGYHEDRQGRPFVGAAGQFL 88 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 +++L + R Q++I+ + PPGNR+ E+ C P + QI +I P +++ +G Sbjct: 89 NELLGRAGLRREQVYITNVVKCRPPGNRDPLPDEIAACAPYLDEQIAVIRPSVIVTLGRY 148 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 + +F N+ + + + HP + P +K+ L++ Sbjct: 149 SMARWFPNEKIS------RIHGKPRRFGDVVVVPMYHPAAALHQPALKELVEKDFDALRE 202 Query: 257 ALKN 260 + Sbjct: 203 IIAQ 206 >gi|325283880|ref|YP_004256421.1| phage SPO1 DNA polymerase-related protein [Deinococcus proteolyticus MRP] gi|324315689|gb|ADY26804.1| phage SPO1 DNA polymerase-related protein [Deinococcus proteolyticus MRP] Length = 224 Score = 155 bits (391), Expect = 6e-36, Method: Composition-based stats. Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 9/204 (4%) Query: 64 VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123 + + D A +L EL+ + C L + L + A T DL+IIG P ++ Sbjct: 3 IPERDLWAPDLRALDELERENKGCTACPLRAGCLQVVVADGTPAADLLIIGEGPGGDEDR 62 Query: 124 SGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP-IIMRQI 182 +G+PF G+ G +LD++L ++++ R +I+ I PP NR + E++ C + RQ+ Sbjct: 63 TGRPFVGRAGQLLDRILAAVDLRREDTYITNIVKCRPPANRAPTPPEIQTCTELWLNRQL 122 Query: 183 ELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS--IIPTLATVHPQELIQY 240 L+ P++++ +GN Q + G+W P S + HP L++ Sbjct: 123 ALLRPRVIVTMGNTPTRHLLG-TQQGITRLRGQWHPYRLPGSDATAALMPMFHPAYLLRN 181 Query: 241 PLI-----KKNTWHALITLKKALK 259 K TW ++ + L+ Sbjct: 182 DTRVKGGPKSLTWGDILEVAGVLR 205 >gi|320334828|ref|YP_004171539.1| phage SPO1 DNA polymerase-like protein [Deinococcus maricopensis DSM 21211] gi|319756117|gb|ADV67874.1| phage SPO1 DNA polymerase-related protein [Deinococcus maricopensis DSM 21211] Length = 216 Score = 155 bits (391), Expect = 7e-36, Method: Composition-based stats. Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 9/193 (4%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 ++ +L++ R C L +T + A L+I+G P ++ G+PF G+ G Sbjct: 5 RAIADLEATARGCTACRLRATCTQVVVADGNPDAPLLILGEGPGGDEDRLGRPFVGRAGQ 64 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP-IIMRQIELISPKILLFI 193 +LDK+L ++ + R +IS I PP NR E+E+C + Q+ L+ P++++ + Sbjct: 65 LLDKILGAVGLTRDDAYISNIVKCRPPANRTPEPDEIEVCTRLWLSGQLALLRPRVIVTL 124 Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS--IIPTLATVHPQELIQYPLI-----KKN 246 GN + + G+W P L HP L++ K Sbjct: 125 GNVPTQYMLG-TRTGITRTRGQWYTYAQAERLWTAPLLPMFHPAYLLRNDTRAPGGPKSL 183 Query: 247 TWHALITLKKALK 259 TW + +K AL Sbjct: 184 TWRDIQAVKAALD 196 >gi|148239810|ref|YP_001225197.1| Uracil-DNA glycosylase [Synechococcus sp. WH 7803] gi|147848349|emb|CAK23900.1| Uracil-DNA glycosylase [Synechococcus sp. WH 7803] Length = 191 Score = 155 bits (391), Expect = 7e-36, Method: Composition-based stats. Identities = 47/193 (24%), Positives = 80/193 (41%), Gaps = 11/193 (5%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 +L LKS + C L + G DLM+IG P ++ G PF G++G Sbjct: 2 NALDALKSQCAACQCCDLAYHRNQVVVGRGNPGADLMLIGEAPGADEDSQGLPFVGRSGR 61 Query: 135 MLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 +L ++L++ E+ Q HI + PP NR ++ E++ CRP + QI L++P ++L Sbjct: 62 LLSELLEAAELDEEQDLHICNVIKCRPPNNRKPTSNEIKQCRPWLEEQIALVNPSLVLLA 121 Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTW 248 G + + G+W + HP L+++ + T Sbjct: 122 GATALQALLGIKS-GISKLRGQWHEQEGKA----FMPVFHPSYLLRFGSREEGSPRALTL 176 Query: 249 HALITLKKALKNL 261 K+ L L Sbjct: 177 QDFQEAKRRLSAL 189 >gi|18312072|ref|NP_558739.1| uracil DNA glycosylase (PA-UDGa) [Pyrobaculum aerophilum str. IM2] gi|18159500|gb|AAL62921.1| uracil DNA glycosylase (Pa-UDGa) [Pyrobaculum aerophilum str. IM2] Length = 196 Score = 155 bits (391), Expect = 7e-36, Method: Composition-based stats. Identities = 40/182 (21%), Positives = 78/182 (42%), Gaps = 3/182 (1%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 L +L L+++ C L + + +MI+G P S++ +G+PF G G + Sbjct: 2 DLQKLHELIKNCDKCPLHKYRKNAVPGEGEMKLGVMIVGEAPGASEDEAGRPFVGAAGQL 61 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 L + L + + R + I+ + PP NR + E+E C P +++QI ++ P+ ++ +G Sbjct: 62 LTEALSRLGVRRGDVFITNVVKCRPPNNRTPNREEVEACLPYLIQQIGILKPRRIIALGL 121 Query: 196 KTKNF---FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 + A+K GK + T HP +++ P ++ L Sbjct: 122 ISAKALMELMGRRAEKLGDVKGKCYQGRIAGVQVELCITYHPAAVLRKPALRGEFQKDLA 181 Query: 253 TL 254 Sbjct: 182 MF 183 >gi|288573334|ref|ZP_06391691.1| phage SPO1 DNA polymerase-related protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569075|gb|EFC90632.1| phage SPO1 DNA polymerase-related protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 192 Score = 154 bits (390), Expect = 8e-36, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 81/190 (42%), Gaps = 6/190 (3%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 S +L+ + + C L T + + E ++++G P ++ +G+PF G++G Sbjct: 2 SWSKLREAVGTCRGCSLWETRNNAVFGEGPEDSPVLLVGEAPGAEEDSTGRPFVGRSGRF 61 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 L ++ + R + IS I PPGNRN E+ C + + L+ P++++ +GN Sbjct: 62 LSDLMAEAGLRREDLFISNIVHCRPPGNRNPKKGEIRACLQWLEDIVGLLRPQVVVTVGN 121 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK-----NTWHA 250 + + G++ + + HP L++ ++ +T Sbjct: 122 VPSQTIIDTK-EGISTLRGRFHHGRLGGMDLTIRPIFHPAYLLRNRSREEGSPVSSTLED 180 Query: 251 LITLKKALKN 260 L TL ++N Sbjct: 181 LRTLVDFVRN 190 >gi|302036861|ref|YP_003797183.1| uracil-DNA glycosylase [Candidatus Nitrospira defluvii] gi|190343276|gb|ACE75664.1| uracil-DNA glycosylase family 4 [Candidatus Nitrospira defluvii] gi|300604925|emb|CBK41258.1| Uracil-DNA glycosylase [Candidatus Nitrospira defluvii] Length = 223 Score = 154 bits (390), Expect = 8e-36, Method: Composition-based stats. Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 6/191 (3%) Query: 70 IAQKACSLHELKSLLRSFHDCHLCS-TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128 ++ +L EL L + C L + +M +G P ++ G+PF Sbjct: 1 MSSSPTTLQELAESLHNCQRCPLAKLGRHQVVFGVGNPHASVMFVGEAPGFHEDQKGEPF 60 Query: 129 SGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188 G G +L+ +L+S + R I+I+ + PP NR+ E+E C+P +++QI +I PK Sbjct: 61 VGAAGQLLNDLLESAGLSRADIYIANVIKCRPPNNRDPEPQEVETCKPFLLQQIAMIRPK 120 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW 248 ++ +GN + G+ L +HP + + + Sbjct: 121 LVCSLGNWATQTLL-ERKVGITRVRGQAFYL----KEFVLFPLLHPAAALHQGTMLQPLR 175 Query: 249 HALITLKKALK 259 LK+ L Sbjct: 176 EDFQKLKEFLD 186 >gi|71483038|gb|AAZ32472.1| uracyl DNA glycosylase [uncultured euryarchaeote Alv-FOS1] Length = 196 Score = 154 bits (390), Expect = 8e-36, Method: Composition-based stats. Identities = 44/187 (23%), Positives = 79/187 (42%), Gaps = 8/187 (4%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 ++ +R C L T + + + +M +G P ++I G+PF G G LD Sbjct: 13 KDIDEQIRKCQKCELWKTRKNAVPGEGGFRKKVMFVGEAPGKWEDIKGRPFVGAAGKYLD 72 Query: 138 KMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197 ++L SI + R + I+ I PP NR+ ++ E+ C P + QIE ++P+I+ +G + Sbjct: 73 ELLSSIGLSRDDVFITNIVKCRPPNNRDPTSEEISACAPYLEWQIETMAPRIICPLGRFS 132 Query: 198 KNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 F + GK I + HP + + K + L Sbjct: 133 AKFILEKFGFTMKSISAAQGKIH-----RGTITIIPMYHPAAALYHGKWKAELEKSFTVL 187 Query: 255 KKALKNL 261 K+ L+ + Sbjct: 188 KEELEGI 194 >gi|148254428|ref|YP_001239013.1| putative Uracil-DNA glycosylase [Bradyrhizobium sp. BTAi1] gi|146406601|gb|ABQ35107.1| Putative Uracil-DNA glycosylase [Bradyrhizobium sp. BTAi1] Length = 496 Score = 154 bits (390), Expect = 9e-36, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 87/242 (35%), Gaps = 17/242 (7%) Query: 27 VFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQ-KACSLHELKSLLR 85 + + + + I P A++ A L L+ Sbjct: 244 LIAAAGRRMSAMIAEPGTAPHKPQKRIEEPAMTRKPTAPAAETSPDVAAADLETLREEAA 303 Query: 86 SFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI 145 + C L + T+ + LM++G P D ++++G PF G G MLD+ LQ I Sbjct: 304 ACRACPLWKDATQTVFGEGPDHAPLMLVGEQPGDKEDLAGHPFVGPAGQMLDRALQEAGI 363 Query: 146 MRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTK 198 R++++++ ++ + E++ CR R++ + P +++ +G Sbjct: 364 DRSKVYVTNAVKHFKFVPRGKIRLHQKPATPEIKACRQWYERELATVRPALVVALGATAA 423 Query: 199 NFFFNNDAQKTYQNLGKWSNLCTPHSII--PTLATVHPQELIQYPLIKKNTWH------A 250 F +N G +L ++I + TVHP L++ P Sbjct: 424 QSVFG-KITPVTKNRGHVVDLPEGPNMIATKAMVTVHPSYLLRLPDADAKAREYELFVKD 482 Query: 251 LI 252 L Sbjct: 483 LK 484 >gi|256826607|ref|YP_003150566.1| uracil-DNA glycosylase, family 4 [Cryptobacterium curtum DSM 15641] gi|256582750|gb|ACU93884.1| uracil-DNA glycosylase, family 4 [Cryptobacterium curtum DSM 15641] Length = 195 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 41/188 (21%), Positives = 73/188 (38%), Gaps = 5/188 (2%) Query: 73 KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 SL L+ + + H C L + + ++IIG P ++++ G+PF G Sbjct: 4 TPQSLESLRRQVEACHACPLWQGRTNVVFGAGNPQARILIIGEAPGKNEDLQGEPFVGAA 63 Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192 G LD +L+ ++ R + I+ + PP NRN E+ C P + Q I+P+ ++ Sbjct: 64 GKKLDALLEIADLARDDVFIANVLKCRPPSNRNPLPEEITACAPFLREQTRTINPEFIVT 123 Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 +GN + F T + HP I ++ Sbjct: 124 LGNFSTKFVLKTQLGIT-----RLHGQLQHAGRFKVFPIYHPAAAIYDRTKQQALEDDFR 178 Query: 253 TLKKALKN 260 TL + +K Sbjct: 179 TLGRLVKE 186 >gi|115523840|ref|YP_780751.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas palustris BisA53] gi|115517787|gb|ABJ05771.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas palustris BisA53] Length = 480 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 84/235 (35%), Gaps = 17/235 (7%) Query: 39 SQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLS 98 +Q + + + R Q A + SL L++ C L + Sbjct: 246 AQAERDKNAMIAEAPRDPRSSQQRREQPMSKSASQRDSLTTLRAEAAECRACPLWKDATQ 305 Query: 99 TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158 T+ +M++G P D ++++G PF G G MLD+ L I R +++++ Sbjct: 306 TVFGEGPSHASVMLVGEQPGDKEDLAGHPFVGPAGQMLDRALAEAGIDRGKVYVTNAVKH 365 Query: 159 HPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQ 211 ++ + E++ CR R++ L+ P +++ +G + Sbjct: 366 FKFVPRGKIRLHQKPTTPEIKTCRQWYERELALVRPTLVVALGATAAQSVLG-RITPINK 424 Query: 212 NLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW------HALITLKKALKN 260 + G+ L TVHP L++ P + L + LK Sbjct: 425 SRGRLIEKEGEAQ---VLVTVHPSYLLRLPDEEAKAREYERFVEDLKIVAAHLKK 476 >gi|124026991|ref|YP_001012311.1| Uracil-DNA glycosylase [Hyperthermus butylicus DSM 5456] gi|123977685|gb|ABM79966.1| predicted Uracil-DNA glycosylase [Hyperthermus butylicus DSM 5456] Length = 221 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 41/189 (21%), Positives = 83/189 (43%), Gaps = 8/189 (4%) Query: 80 LKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKM 139 L + + C L + + +M+IG P ++++ G+PF G G +L+K+ Sbjct: 10 LVEEIMNCTKCRLHQYRRNPVPGEGPLNAKVMVIGEAPGRNEDLQGRPFVGAAGQLLNKL 69 Query: 140 LQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199 L+ + R Q++I+ I PPGNR+ E++ C P ++ QI L+ PK+++ +G + Sbjct: 70 LELAGLKREQVYITNIVKCRPPGNRDPQEDEVKACLPYLLHQIRLVKPKLIIAVGRHSAR 129 Query: 200 FFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI---- 252 + + GK + + T HP + P +++ Sbjct: 130 TLLELAGLQWRSMSEQHGKTYHGEIGGVKLMITVTYHPAAALYKPPLRQKLEDDFRGPIA 189 Query: 253 -TLKKALKN 260 +++AL+ Sbjct: 190 AAVREALRE 198 >gi|94985656|ref|YP_605020.1| phage SPO1 DNA polymerase-related protein [Deinococcus geothermalis DSM 11300] gi|94555937|gb|ABF45851.1| uracil-DNA glycosylase [Deinococcus geothermalis DSM 11300] Length = 230 Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 46/204 (22%), Positives = 80/204 (39%), Gaps = 12/204 (5%) Query: 67 ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126 A A +L L+ +S C L + + L+IIG P ++ G+ Sbjct: 5 AGRQAADVIALEALEQQAKSCAACKLRPGCTQVVVSDGDPAAPLVIIGEGPGGDEDRLGR 64 Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP-IIMRQIELI 185 PF G+ G +LD++L ++ + R + + I PPGNR E IC + Q+ L+ Sbjct: 65 PFVGRAGQLLDRILAAVNLTRQDAYFTNIVKCRPPGNRAPEPDETAICTELWLEPQLALL 124 Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT-----PHSIIPTLATVHPQELIQY 240 P+++L +GN + Q + G+W + HP L++ Sbjct: 125 RPRVILSLGNTPTQYLLG-TRQGITRTRGQWYPYRHATAQGGSYQALLMPMFHPAYLLRN 183 Query: 241 PLI-----KKNTWHALITLKKALK 259 K TW + + L+ Sbjct: 184 DTRAPGGPKSLTWRDIREVAAVLR 207 >gi|298246517|ref|ZP_06970323.1| phage SPO1 DNA polymerase-related protein [Ktedonobacter racemifer DSM 44963] gi|297553998|gb|EFH87863.1| phage SPO1 DNA polymerase-related protein [Ktedonobacter racemifer DSM 44963] Length = 213 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 74/178 (41%), Gaps = 5/178 (2%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L E+ + + C+LC + + ++ IG P ++ G+PF G G L Sbjct: 7 LREVAVEVSTCSKCNLCKGRTRAVPGEGSTSAKILFIGEGPGYHEDQQGRPFVGPAGQFL 66 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 D++L SI + R+ + I+ + PP NR+ E+ C + RQIE + P++++ +G Sbjct: 67 DELLASINLKRSDVFITNVVKCRPPQNRDPQPDEIAACNNYLDRQIEALKPRVIVTLGRF 126 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 + FF N+ + + +A HP + +K + Sbjct: 127 SMAKFFGNEKISVIHGRAR-----KKDAGYICIAMYHPAAGLHQASLKDVIREDFKKI 179 >gi|328954809|ref|YP_004372142.1| phage SPO1 DNA polymerase-related protein [Coriobacterium glomerans PW2] gi|328455133|gb|AEB06327.1| phage SPO1 DNA polymerase-related protein [Coriobacterium glomerans PW2] Length = 222 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 80/184 (43%), Gaps = 5/184 (2%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 L E++++L C L T + T E ++ IG P ++++ G+PF G G Sbjct: 18 ELREVRAVLGECRRCQLAQTRTKIVFGTGDENARVLFIGEAPGKNEDLQGEPFVGAAGKN 77 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 LD +L + R +++I+ + PPGNR+ E+ C P + QI I P +++ +GN Sbjct: 78 LDGILSLAGLRREEVYIANVLKCRPPGNRDPRPEEVLACAPFLREQIRSIWPDVIVTMGN 137 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 +F + + G++ + + T HP ++ P + L Sbjct: 138 PATHFILKTE-IGITRLRGRFHQM----GRFAVMPTFHPAAALRNPAWQDLIEADFNMLG 192 Query: 256 KALK 259 L+ Sbjct: 193 DYLR 196 >gi|295106610|emb|CBL04153.1| uracil-DNA glycosylase, family 4 [Gordonibacter pamelaeae 7-10-1-b] Length = 226 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 77/184 (41%), Gaps = 5/184 (2%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L ++++ + + C L T+ ++I+G P ++++ G+PF GK G L Sbjct: 8 LEDIRAQVEACRKCPLADGRTQTVFGVGNPSARVLIVGEAPGKNEDLQGEPFVGKAGQYL 67 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 +++L + R + I+ + PPGNR+ E+E+C P + Q I P+ ++ +GN Sbjct: 68 NELLAIAGLAREHVFIANVLKCRPPGNRDPRPEEIELCTPYLREQTRTIDPEFIVTLGNF 127 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 + F + T + HP I ++ + TL + Sbjct: 128 STKFILKTEIGIT-----RLHGTLQRAGKFKVFPIFHPAAAIYDGSKREALENDFATLGE 182 Query: 257 ALKN 260 L+ Sbjct: 183 LLRA 186 >gi|71483068|gb|AAZ32501.1| uracil DNA glycosylase [uncultured euryarchaeote Alv-FOS4] Length = 196 Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 77/187 (41%), Gaps = 8/187 (4%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 L +R C L T + + +M +G P ++I G+PF G G LD Sbjct: 13 DSLDDKIRECKKCGLWKTRTHAVPGEGGFRKKVMFVGEAPGKWEDIKGRPFVGAAGKYLD 72 Query: 138 KMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197 ++L +I + R ++I+ I PP NR+ ++ E+ C P + QIE + P+++ +G + Sbjct: 73 ELLATIGLSRDDVYITNIVKCRPPNNRDPTDEEIRACAPYLEWQIEHMRPRVICPLGRFS 132 Query: 198 KNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 F + GK I + HP + + K A TL Sbjct: 133 AKFILEKFGFTMKSITAAQGKIY-----RGDIIIIPMFHPAAALYHGKWKPELEKAFATL 187 Query: 255 KKALKNL 261 K L ++ Sbjct: 188 KSVLDDM 194 >gi|260221974|emb|CBA31074.1| hypothetical protein Csp_C26730 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 286 Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 50/233 (21%), Positives = 86/233 (36%), Gaps = 7/233 (3%) Query: 32 NNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCH 91 A QR + A +P+ A A A + L + C Sbjct: 52 VRPAPLTEQRPSAPVPMASRPVPVQVAAVESA-APAQPSALAALDWNGLADTAAACESCG 110 Query: 92 LCSTSLS-TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR--- 147 LC+ T+ Q D M++G P + ++ + + F G +LD ML+++ R Sbjct: 111 LCAGRKHATLQPAQQAQADWMVVGDPPEEDEDSAAQAFVEAPGLLLDNMLKAVGAGRSGS 170 Query: 148 --TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 + + + PP RN ++ C + R+IEL+ PK++ +G + Sbjct: 171 GPQGAYATNVVKCRPPHGRNPQPADLAQCAAYLQREIELVQPKVIFAVGRFAIQTLLSEH 230 Query: 206 AQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 Q LGK + IP + + P+ L++ K W L AL Sbjct: 231 GALATQPLGKLRGSVYRYRGIPVVVSYPPKLLLRNSADKAKAWADLCLAMDAL 283 >gi|149921262|ref|ZP_01909718.1| phage SPO1 DNA polymerase-related protein [Plesiocystis pacifica SIR-1] gi|149817922|gb|EDM77384.1| phage SPO1 DNA polymerase-related protein [Plesiocystis pacifica SIR-1] Length = 464 Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 5/209 (2%) Query: 34 EATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSL-LRSFHDCHL 92 E ++ + QP N L +QA+ A L L+ + C L Sbjct: 197 RRGPERGAPSQAPGARSQPDANANANKGTLRRQAEQW-PAAKKLAYLRDRSVGDCRRCRL 255 Query: 93 CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHI 152 T + + D+M +G P ++ G+PF G G LD L + + R++++I Sbjct: 256 AETRRNLVFGVGNPDADMMFVGEAPGAEEDRRGEPFVGAAGQRLDAWLHELGLQRSEVYI 315 Query: 153 SMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN 212 + + PPGNR+ +E++ C P + QI I P++L+ +G + K YQ Sbjct: 316 ANVLKCRPPGNRDPHPVEIQRCSPFLHAQIRAIQPRVLVALGRFAG-CLLLDRQLKMYQM 374 Query: 213 LGKWSNLCTPHSI--IPTLATVHPQELIQ 239 G P + P + T HP +++ Sbjct: 375 RGSVHRYREPKTGTEFPLVVTYHPSYVLR 403 >gi|116754774|ref|YP_843892.1| phage SPO1 DNA polymerase-related protein [Methanosaeta thermophila PT] gi|116666225|gb|ABK15252.1| phage SPO1 DNA polymerase-related protein [Methanosaeta thermophila PT] Length = 184 Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 79/183 (43%), Gaps = 9/183 (4%) Query: 74 ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 A L EL + C L T + + E +M+IG P +++++G+PF G+ G Sbjct: 3 ANDLRELACEIVRCERCGLSKTRRNAVPGEGPEDARIMMIGEAPGAAEDLAGRPFVGRAG 62 Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 +L++ L + R +I I+ I PPGNR S E+ C P + +QIE++ P + + Sbjct: 63 AILNRALNLAGLDRDEIFITNIVKCRPPGNRQPSADEIRACMPYLRKQIEMVRPSAICLL 122 Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253 GN G+ + L T HP +++ + L+ Sbjct: 123 GNVPARAILGVQGV--TALRGRVFDDLY-------LITFHPAAVLRNMGRMELFVSDLVR 173 Query: 254 LKK 256 L++ Sbjct: 174 LRE 176 >gi|297623507|ref|YP_003704941.1| phage SPO1 DNA polymerase-like protein [Truepera radiovictrix DSM 17093] gi|297164687|gb|ADI14398.1| phage SPO1 DNA polymerase-related protein [Truepera radiovictrix DSM 17093] Length = 219 Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats. Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 11/194 (5%) Query: 74 ACSLHELKSLLRS-FHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 +L +L+ R+ L S + + D++I+G P + +++ G+PF G+ Sbjct: 13 PMTLSDLEQQARNTPKPAALAELSDNLVFGEGNPDADVVIVGEAPGEDEDLLGRPFVGRA 72 Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192 G +LD++L+S I R ++I+ I + PPGNRN E+E P+++ Q+ LI P+I+ Sbjct: 73 GQLLDRILESAHIEREDVYITNILKYRPPGNRNPKPEEIEASAPLLLEQLRLIRPQIIAT 132 Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNT 247 +GN +F + + G+W + + HP L++ P K Sbjct: 133 LGNFPTQYFAGTK-EGITKTRGRWFSW----HGVRVFPMFHPAYLLRNPSRERGSPKWLM 187 Query: 248 WHALITLKKALKNL 261 W + LK A+ L Sbjct: 188 WQDIRALKAAIDEL 201 >gi|302334972|ref|YP_003800179.1| phage SPO1 DNA polymerase-related protein [Olsenella uli DSM 7084] gi|301318812|gb|ADK67299.1| phage SPO1 DNA polymerase-related protein [Olsenella uli DSM 7084] Length = 203 Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats. Identities = 47/185 (25%), Positives = 78/185 (42%), Gaps = 5/185 (2%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 SL E++SL+ + C L T + + +MIIG P ++++ G+PF G G Sbjct: 18 SLEEIRSLMGNCQLCELGQTRSNLVFGVGDPHARVMIIGEGPGKNEDLQGEPFVGAAGKK 77 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 LD +L + + R +++I+ + PP NRN E+E C P + Q+ I P ++ +GN Sbjct: 78 LDALLGNAGLTRDEVYIANVVKCRPPSNRNPRPAEIEACSPFLREQVRSIWPDAIICLGN 137 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 + D G+ L T HP I + + L L Sbjct: 138 FASQWVLKTDRGVMS-LRGRLHQQ----GHFVVLPTFHPAACIYHSEWQPLLEEDLRLLG 192 Query: 256 KALKN 260 L+ Sbjct: 193 AWLRE 197 >gi|218782236|ref|YP_002433554.1| phage SPO1 DNA polymerase-related protein [Desulfatibacillum alkenivorans AK-01] gi|218763620|gb|ACL06086.1| phage SPO1 DNA polymerase-related protein [Desulfatibacillum alkenivorans AK-01] Length = 235 Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 75/181 (41%), Gaps = 5/181 (2%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 L++ S DC L + + LM+ G P ++ +G PF G+ G +LD Sbjct: 55 AGLEAEALSCTDCPLHKERIKGVFGQGDPEAALMLAGIAPGMEESKAGLPFQGEVGGLLD 114 Query: 138 KMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197 +L+++ + R +++ + P + + C +Q+E + P+++ G T Sbjct: 115 NILKAMGMTRDDVYLCNLVKCPVPDGELPDPMCLRACSRFFRKQVEAVRPQVICAFGQIT 174 Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKA 257 D + G+ + + T HP+EL+ P K+ WH + + +A Sbjct: 175 AEAILKQDL-PYSRVRGQLQPY----LGMRVMPTFHPRELLTAPQKKRAVWHDMQAIMRA 229 Query: 258 L 258 + Sbjct: 230 I 230 >gi|218460666|ref|ZP_03500757.1| putative uracil DNA glycosylase protein [Rhizobium etli Kim 5] Length = 329 Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats. Identities = 41/239 (17%), Positives = 95/239 (39%), Gaps = 17/239 (7%) Query: 35 ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94 A+ ES+ +E + A Q + + + A +L L++ C L + Sbjct: 93 ASAESKVREMAAREATQSLPFHDRLQQAARNLSAEPELPAGTLEALRAEAAVCTRCPLHA 152 Query: 95 TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154 + T+ D+M +G P D ++I+G+PF G G + D+++ I R+ ++++ Sbjct: 153 NATQTVFGEGPRDADVMFVGEQPGDQEDIAGRPFVGPAGRLFDQVIGEAGIDRSTLYVTN 212 Query: 155 ISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207 ++ + E++ CR + ++ L+ PK+++ +G + + Sbjct: 213 AVKHFKYEPRGKRRVHQKPNMGEVKHCRWWLDLELALVKPKLIVAMGATALAALTDVKGR 272 Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK------KNTWHALITLKKALKN 260 G+ + TVHP L++ P + ++ +++ +K Sbjct: 273 LQ-DVRGRAMAIE---GGRTLFVTVHPSYLLRIPDERLKAEEMARFREDMLEIQRLMKA 327 >gi|257785043|ref|YP_003180260.1| phage SPO1 DNA polymerase-like protein [Atopobium parvulum DSM 20469] gi|257473550|gb|ACV51669.1| phage SPO1 DNA polymerase-related protein [Atopobium parvulum DSM 20469] Length = 221 Score = 151 bits (382), Expect = 7e-35, Method: Composition-based stats. Identities = 52/217 (23%), Positives = 86/217 (39%), Gaps = 7/217 (3%) Query: 46 IDSAIQPITNIRHIHSPLVQQADSI--AQKACSLHELKSLLRSFHDCHLCSTSLSTICAT 103 S P + V+ + Q +L E+ + C L T + + Sbjct: 2 AASPASPKNALGRKRMSNVEYSKIAYSKQAGQTLDEICEQIADCKKCPLWETRTNIVFGG 61 Query: 104 QTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGN 163 +MI+G P ++++SG+PF G +G LD +L+ + + + IS + PP N Sbjct: 62 PNPTARIMIVGEAPGKNEDLSGQPFVGTSGKKLDALLEEVGLSHQDVFISNVVKCRPPSN 121 Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH 223 RN E+E C P + QI I P +++ +GN F + D + GK+ + Sbjct: 122 RNPKVAEVEECSPYLRDQIRAIKPDVIVCLGNFATQFVMHTDKGV-TELRGKFYQI---- 176 Query: 224 SIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 L T+HP I + L L LK Sbjct: 177 GAFSVLPTMHPASTIYRKEWAQFLKDDLQLLADWLKK 213 >gi|118431039|ref|NP_147220.2| uracil-DNA glycosylase [Aeropyrum pernix K1] gi|116062365|dbj|BAA79385.2| uracil-DNA glycosylase [Aeropyrum pernix K1] Length = 227 Score = 151 bits (382), Expect = 7e-35, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 75/178 (42%), Gaps = 3/178 (1%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L +L+ +R C L +T + +M++G P ++ G+PF G G +L Sbjct: 6 LRQLEEEVRRCTRCPLHATRTHAVPGEGPGEAGVMVVGEAPGRMEDRLGRPFVGPAGKLL 65 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 D +L+ + R +++I+ + PPGNR+ E+E C P ++ QI LI P++++ +G Sbjct: 66 DSLLELAGLSRGEVYITNVVKCRPPGNRDPREEEIEACLPYLVEQISLIRPRLVIAVGRH 125 Query: 197 TKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 F + G+ + T HP + P ++ Sbjct: 126 AGRTLFRLAGLRWPGLARARGRVWRGRIGGVELLIAVTYHPAAALYNPGLRGELERDF 183 >gi|300087337|ref|YP_003757859.1| phage SPO1 DNA polymerase-like protein [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527070|gb|ADJ25538.1| phage SPO1 DNA polymerase-related protein [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 214 Score = 151 bits (381), Expect = 9e-35, Method: Composition-based stats. Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 6/187 (3%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 SL ++ + S C L S + ++M IG P +++ +G+PF G G Sbjct: 7 ASLEDIAREIGSCEACGLASGRNQAVPGEGHAETEIMFIGEAPGFNEDRTGRPFCGAAGQ 66 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 L +M++SI + R Q++I+ I PPGNR+ E+ CR + RQ+ I P++++ +G Sbjct: 67 FLTQMIESIGLNRNQVYITNIVKCRPPGNRDPLPEEITACRHWLDRQLAAIRPRVVVTLG 126 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 + + FF + + G+W + LA HP + ++ + L Sbjct: 127 RYSMSRFF--PGKTISRIHGQW----EKQGDLVCLAMYHPAAALHQGSLRATILADMARL 180 Query: 255 KKALKNL 261 + +K L Sbjct: 181 PEIIKEL 187 >gi|15806754|ref|NP_295474.1| DNA polymerase-like protein [Deinococcus radiodurans R1] gi|6459521|gb|AAF11304.1|AE002016_6 DNA polymerase-related protein [Deinococcus radiodurans R1] Length = 237 Score = 151 bits (381), Expect = 9e-35, Method: Composition-based stats. Identities = 45/210 (21%), Positives = 87/210 (41%), Gaps = 10/210 (4%) Query: 58 HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117 + QA A L L+ R C L ++ + + L+I+G P Sbjct: 6 PPPRHPLHQAADPPDPAA-LLALEDRNRGCAACPLRVSASQVVVSDGDPRAPLLIVGEGP 64 Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP- 176 ++ G+PF G+ G +LD++L + + R + +++ ++ P NR +E C Sbjct: 65 GAEEDRDGRPFVGQAGQLLDRILAAASLAREEAYLTNVTKCRAPNNRTPLPLETATCTGL 124 Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP--TLATVHP 234 + Q+ L+ P+++L +GN F + + G+W P P + +HP Sbjct: 125 WLEPQLALLRPRVVLSLGNTATQFLLG-TPRGITRLRGQWFTYRHPAWPQPALLMPLLHP 183 Query: 235 QELIQYPLI-----KKNTWHALITLKKALK 259 L++ P+ K TW + + L+ Sbjct: 184 AYLLRNPVRTPGGPKSLTWRDIREVAAVLR 213 >gi|84622266|ref|YP_449638.1| DNA polymerase related protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84366206|dbj|BAE67364.1| DNA polymerase related protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 482 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 90/267 (33%), Gaps = 37/267 (13%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60 M K + + ++ ++GV E E R+ A QP T Sbjct: 225 MPQKYWKNLPEAASLPELIREAGVRV---REMAERAPEPVRRRVPAAPAPQPDTTTH--- 278 Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120 SL +L+S R C L + T+ + +M+IG P D Sbjct: 279 ---------------SLAQLRSAARDCRRCELWQPATQTVFGEGPDDASVMVIGEQPGDE 323 Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEI 173 +++SG+PF G G + L + + R + +++ +RN ++ Sbjct: 324 EDLSGRPFVGPAGRLFTMALGELGVDRQRFYVTNAVKHFRFEQRGKRRLHRNPERAHLQA 383 Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 C + + + P ++ +G + Q G+W L P L TVH Sbjct: 384 CSGWLQAERTQLRPAQIVCLGATAAQAVLGRSGFRLMQERGQWQRL---DDGTPVLTTVH 440 Query: 234 PQELIQYPLIK------KNTWHALITL 254 P +++ P + L L Sbjct: 441 PSWVLRQPSTDAREEGYRGFVEDLRQL 467 >gi|188578772|ref|YP_001915701.1| uracil DNA glycosylase superfamily protein [Xanthomonas oryzae pv. oryzae PXO99A] gi|188523224|gb|ACD61169.1| uracil DNA glycosylase superfamily protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 477 Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 90/267 (33%), Gaps = 37/267 (13%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60 M K + + ++ ++GV E E R+ A QP T Sbjct: 220 MPQKYWKNLPEAASLPELIREAGVRV---REMAERAPEPVRRRVPAAPAPQPDTTTH--- 273 Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120 SL +L+S R C L + T+ + +M+IG P D Sbjct: 274 ---------------SLAQLRSAARDCRRCELWQPATQTVFGEGPDDASVMVIGEQPGDE 318 Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEI 173 +++SG+PF G G + L + + R + +++ +RN ++ Sbjct: 319 EDLSGRPFVGPAGRLFTMALGELGVDRQRFYVTNAVKHFRFEQRGKRRLHRNPERAHLQA 378 Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 C + + + P ++ +G + Q G+W L P L TVH Sbjct: 379 CSGWLQAERTQLRPAQIVCLGATAAQAVLGRSGFRLMQERGQWQRL---DDGTPVLTTVH 435 Query: 234 PQELIQYPLIK------KNTWHALITL 254 P +++ P + L L Sbjct: 436 PSWVLRQPSTDAREEGYRGFVEDLRQL 462 >gi|192290395|ref|YP_001991000.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas palustris TIE-1] gi|192284144|gb|ACF00525.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas palustris TIE-1] Length = 495 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 42/231 (18%), Positives = 88/231 (38%), Gaps = 20/231 (8%) Query: 37 YESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTS 96 ++RK ++ +A P + +A+ KA +L L+ + C L + Sbjct: 262 EHAERKAHAMVAAEATAPRKPQRQEPPMTRAE---PKADTLAHLREEAKDCRACDLWKDA 318 Query: 97 LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156 T+ + +M++G P D ++++GKPF G G MLD+ L + R++ +++ Sbjct: 319 TQTVFGEGPQHATVMLVGEQPGDKEDLAGKPFVGPAGQMLDRALAEAGVDRSKTYVTNAV 378 Query: 157 PWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209 ++ + E++ CR R++ + P +++ +G Sbjct: 379 KHFKFVPRGKIRLHQKPATPEIKACRQWYERELAAVQPLLVVAMGATAAQSVLG-RITPI 437 Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW------HALITL 254 + G+ + L TVHP L++ P L + Sbjct: 438 NKTRGRLID---RDDGPQVLVTVHPSYLLRLPDADAKAREYARFVEDLKLI 485 >gi|167043274|gb|ABZ07980.1| putative Uracil DNA glycosylase superfamily protein [uncultured marine crenarchaeote HF4000_ANIW141M12] Length = 191 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 79/185 (42%), Gaps = 6/185 (3%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L ++ +++ C LC T + + + D++ IG P ++++ G+PF G G L Sbjct: 7 LEIIQEKVKTCEKCDLCITRKNAVPGKGNQNADIVFIGEAPGKNEDLRGEPFIGTAGKKL 66 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 D L+++ + R ++I+ I PP NR +++E +C + ++ +I+PKI+ +G+ Sbjct: 67 DDALKNVGLTRNSVYITNIVKCRPPKNRIPNDLEKIMCSNYLEGELAIINPKIICLLGST 126 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 K T HP I + K + + L K Sbjct: 127 AFYSILGGKEIS------KHHGKFVSKDNRMYFVTFHPAAAIYNQKLGKVFKNDIKKLMK 180 Query: 257 ALKNL 261 L+ L Sbjct: 181 ELQKL 185 >gi|316935046|ref|YP_004110028.1| phage SPO1 DNA polymerase-like protein [Rhodopseudomonas palustris DX-1] gi|315602760|gb|ADU45295.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas palustris DX-1] Length = 517 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 40/232 (17%), Positives = 81/232 (34%), Gaps = 17/232 (7%) Query: 42 KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTIC 101 E+ + + Q KA +L L+ + C L + T+ Sbjct: 286 AERKAHAMVAAEATAPRKPQRQEQPMTRAKPKADTLAHLREEAKDCRACDLWKDATQTVF 345 Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 + +M++G P D ++++GKPF G G MLD+ L + R++ +++ Sbjct: 346 GEGPQHATVMLVGEQPGDKEDLAGKPFVGPAGQMLDRALAEAGVDRSKTYVTNAVKHFKF 405 Query: 162 G-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLG 214 ++ + E++ CR R++ + P +++ +G G Sbjct: 406 VPRGKIRLHQKPNTPEIKACRQWYERELAAVQPLLVVAMGATAAQSVLGKVTPINAN-RG 464 Query: 215 KWSNLCTPHSIIPTLATVHPQELIQYPLIKKN------TWHALITLKKALKN 260 + L TVHP L++ P + L + L+ Sbjct: 465 HLID---RDDGPQVLVTVHPSYLLRLPDAEAKEREYARFVDDLKIVAAHLRK 513 >gi|88808859|ref|ZP_01124368.1| phage SPO1 DNA polymerase-related protein [Synechococcus sp. WH 7805] gi|88786801|gb|EAR17959.1| phage SPO1 DNA polymerase-related protein [Synechococcus sp. WH 7805] Length = 191 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 45/190 (23%), Positives = 76/190 (40%), Gaps = 11/190 (5%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 +L L S + C L + G DLM+IG P ++ G PF G++G Sbjct: 2 KALDALNSQCAACRRCDLAHHRQKAVVGRGNPGSDLMLIGEAPGADEDSLGLPFVGRSGR 61 Query: 135 MLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 +L +L+ E+ Q +I + PP NR + E+ CRP + Q+EL++P ++L Sbjct: 62 LLSALLKEAELDEDQDLYICNVIKCRPPNNRKPTLEEIRQCRPWLEEQLELVNPSLVLMA 121 Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK-----KNTW 248 G + + G+W + HP L+++ + T Sbjct: 122 GATALKALLGIKS-GISKLRGQWHEQE----GRAFMPVFHPSYLLRFQSREAGSPQALTL 176 Query: 249 HALITLKKAL 258 L K+ L Sbjct: 177 QDLQEAKRRL 186 >gi|330834083|ref|YP_004408811.1| phage SPO1 DNA polymerase-related protein [Metallosphaera cuprina Ar-4] gi|329566222|gb|AEB94327.1| phage SPO1 DNA polymerase-related protein [Metallosphaera cuprina Ar-4] Length = 206 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 81/186 (43%), Gaps = 4/186 (2%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 + ++++ + + CHL T + +++++G P ++ +G+PF G G +L Sbjct: 1 MQDIRNQVINCKKCHLHKTRTYAVPGEGNTNSEIVLVGEAPGAKEDRTGRPFVGAAGQLL 60 Query: 137 DKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 D+++Q I R + I+ + PP NR+ S E+ C P ++ QI LI PKI++ +G Sbjct: 61 DELIQRYLRIERDSVFITNLVKCRPPNNRDPSEDEIVTCSPYLLAQINLIKPKIIVTLGR 120 Query: 196 KTK---NFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 + + + + GK + + + HP + +K Sbjct: 121 HSTRFFQNLAKVEEESISKCHGKPFYINLSFGTVRVFPSYHPAAALYNRSLKSELEKDFQ 180 Query: 253 TLKKAL 258 L + + Sbjct: 181 LLSRLI 186 >gi|162146549|ref|YP_001601008.1| uracil-DNA glycosylase [Gluconacetobacter diazotrophicus PAl 5] gi|161785124|emb|CAP54669.1| putative uracil-DNA glycosylase [Gluconacetobacter diazotrophicus PAl 5] Length = 309 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 69/269 (25%), Positives = 113/269 (42%), Gaps = 20/269 (7%) Query: 11 QILTIALFYADSGVYWVFD-EPNNEATYESQRKEK---SIDSAIQPITNIRHIHSPLVQQ 66 L + YA+ G FD P + + P R V+ Sbjct: 37 DALALLQLYAEWGADVAFDDSPTDRLAARPPPPARAGIPPARDDAPSPPARPAGRAAVEP 96 Query: 67 ADSI-------------AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113 D + A A +L L + L +F C L T+ T+ G L++I Sbjct: 97 DDGLTLVERAIRQARDAAAAAENLPALHAALAAFGGCALRDTATHTVVPEGPAGARLLLI 156 Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173 G P +++ SG F+G G +LD+ML SI + RT + ++ + PW PPG R S E++I Sbjct: 157 GEPPDAAEDRSGTAFAGPAGQILDRMLTSIGLARTDMLLAPVIPWRPPGERPPSAAELQI 216 Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI--IPTLAT 231 C P + R I L +P+ ++ +GN + + G+W ++ P IP L Sbjct: 217 CAPFLHRLIVLANPRRIILMGNTPAR-LLTGEQGGIARLRGRWRDVAIPGLGRAIPILPM 275 Query: 232 VHPQELIQYPLIKKNTWHALITLKKALKN 260 HP +L P +++ W ++ L+ L Sbjct: 276 RHPSQLGASPAARRDAWKDIVLLRTTLDQ 304 >gi|209543453|ref|YP_002275682.1| phage SPO1 DNA polymerase-like protein [Gluconacetobacter diazotrophicus PAl 5] gi|209531130|gb|ACI51067.1| phage SPO1 DNA polymerase-related protein [Gluconacetobacter diazotrophicus PAl 5] Length = 274 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 68/269 (25%), Positives = 112/269 (41%), Gaps = 20/269 (7%) Query: 11 QILTIALFYADSGVYWVFDEPNNEATYESQRKEK----SIDSAIQPITNIRHIHSPLVQQ 66 L + YA+ G FD+ + P R V+ Sbjct: 2 DALALLQLYAEWGADVAFDDSPTDHLAARPPPPARAGIPPARDDAPSPPARPAGRAAVEP 61 Query: 67 ADSI-------------AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113 D + A A +L L + L +F C L T+ T+ G L++I Sbjct: 62 DDGLTLVERAIRQARDAAAAAENLPALHAALAAFGGCALRDTATHTVVPEGPAGARLLLI 121 Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173 G P +++ SG F+G G +LD+ML SI + RT + ++ + PW PPG R S E++I Sbjct: 122 GEPPDAAEDRSGTAFAGPAGQILDRMLTSIGLARTDMLLAPVIPWRPPGERPPSAAELQI 181 Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI--IPTLAT 231 C P + R I L +P+ ++ +GN + + G+W ++ P IP L Sbjct: 182 CAPFLHRLIVLANPRRIILMGNTPAR-LLTGEQGGIARLRGRWRDVAIPGLGRAIPILPM 240 Query: 232 VHPQELIQYPLIKKNTWHALITLKKALKN 260 HP +L P +++ W ++ L+ L Sbjct: 241 RHPSQLGASPAARRDAWKDIVLLRTTLDQ 269 >gi|39934868|ref|NP_947144.1| Uracil-DNA glycosylase:Phage SPO1 DNA polymerase-like protein [Rhodopseudomonas palustris CGA009] gi|39648718|emb|CAE27240.1| Uracil-DNA glycosylase:Phage SPO1 DNA polymerase-related protein [Rhodopseudomonas palustris CGA009] Length = 495 Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 87/231 (37%), Gaps = 20/231 (8%) Query: 37 YESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTS 96 ++RK ++ +A P + +A+ KA +L L+ + C L + Sbjct: 262 EHAERKAHAMVAAEATAPRKPQRQEPPMTRAE---PKADTLAHLREEAKDCRACDLWKDA 318 Query: 97 LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156 T+ + +M++G P D ++++G+PF G G MLD+ L + R++ +++ Sbjct: 319 TQTVFGEGPQHATVMLVGEQPGDKEDLAGQPFVGPAGQMLDRALAEAGVDRSKTYVTNAV 378 Query: 157 PWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209 ++ + E++ CR R++ + P +++ +G Sbjct: 379 KHFKFVPRGKIRLHQKPATPEIKACRQWYERELAAVQPLLVVAMGATAAQSVLG-RITPI 437 Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW------HALITL 254 + G + L TVHP L++ P L + Sbjct: 438 NKTRGHLID---RDDGPQVLVTVHPSYLLRLPDADAKAREYARFVEDLKLI 485 >gi|260654357|ref|ZP_05859847.1| uracil-DNA glycosylase [Jonquetella anthropi E3_33 E1] gi|260630990|gb|EEX49184.1| uracil-DNA glycosylase [Jonquetella anthropi E3_33 E1] Length = 195 Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 72/183 (39%), Gaps = 6/183 (3%) Query: 80 LKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKM 139 L L C L + + + + + ++++G P +++ SG PF G +G +L ++ Sbjct: 2 LARELAGCSRCGLRAGAKAPVFGSGPRESRVVLVGEAPGAAEDESGIPFVGASGRLLSQL 61 Query: 140 LQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199 L+ + R ++ I+ PP NR E+ C + RQ+E+I P ++ +GN Sbjct: 62 LEESGLRRDELFITNAVKCRPPDNRTPQKDELSCCLCWLRRQLEMIRPDGIITVGNVPSR 121 Query: 200 FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK-----NTWHALITL 254 + G++ +L HP L++ + T L + Sbjct: 122 ALLG-RREGVTALRGRFYSLEIGGRTAWVRPIFHPAYLLRNRTRRPGSPILLTLEDLKDV 180 Query: 255 KKA 257 Sbjct: 181 ACR 183 >gi|258646788|ref|ZP_05734257.1| uracil-DNA glycosylase, family 4 [Dialister invisus DSM 15470] gi|260404216|gb|EEW97763.1| uracil-DNA glycosylase, family 4 [Dialister invisus DSM 15470] Length = 248 Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats. Identities = 49/188 (26%), Positives = 81/188 (43%), Gaps = 12/188 (6%) Query: 80 LKSLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDK 138 L++ + C LC + +T LMI+G P ++ G P G +G +LDK Sbjct: 33 LENAIHRCRLCPLCNEGGRGPVLSTGPVDAPLMIVGEGPGGVEDEYGGPLVGPSGQLLDK 92 Query: 139 MLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC-RPIIMRQIELISPKILLFIGNKT 197 L S+ I R ++++ I P GNR + E C R + +I L+ PK+++ +G Sbjct: 93 ALLSVGITRDHVYVTNIVKCRPRGNRTPTIAEGNECGRRWLAEEIRLLQPKVIIALGKVA 152 Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP-----LIKKNTWHALI 252 FF +DA ++ G W + IP + T HP L++ K ++ L Sbjct: 153 LRFFLGHDA-GIIRSRGHWIDY----KGIPVMPTFHPAYLLRQTGEGLKEAKWQVYYDLK 207 Query: 253 TLKKALKN 260 K Sbjct: 208 AAKDRAAE 215 >gi|325926412|ref|ZP_08187737.1| uracil-DNA glycosylase, family 4 [Xanthomonas perforans 91-118] gi|325543201|gb|EGD14639.1| uracil-DNA glycosylase, family 4 [Xanthomonas perforans 91-118] Length = 478 Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 93/267 (34%), Gaps = 38/267 (14%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60 M K + + + ++GV A + + + +A P+ ++ Sbjct: 225 MPQKYWKNLPEATLLPELIREAGVRV-----REMAERAPEPVRRRVPAAPAPLPDVAT-- 277 Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120 SL +L++ R C L + T+ + +M+IG P D Sbjct: 278 --------------QSLAQLRTAARDCRRCELWQPATQTVFGEGPDDASVMVIGEQPGDE 323 Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEI 173 +++SG+PF G G + + L + + R + +++ +RN ++ Sbjct: 324 EDLSGRPFVGPAGRLFNMALGELGVDREKFYVTNAVKHFRFEQRGKRRLHRNPERTHVQA 383 Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 C + + + P ++ +G + + + G+W L P L TVH Sbjct: 384 CSGWLQAERAQLRPAQIVCLGATAAQAILGSSFRLM-RERGQWHRL---DDGTPVLTTVH 439 Query: 234 PQELIQYPLIK------KNTWHALITL 254 P +++ P + L L Sbjct: 440 PSWVLRQPSTDAREEGYRGFVEDLRRL 466 >gi|320162563|ref|YP_004175788.1| uracil-DNA glycosylase [Anaerolinea thermophila UNI-1] gi|319996417|dbj|BAJ65188.1| uracil-DNA glycosylase [Anaerolinea thermophila UNI-1] Length = 217 Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats. Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 6/184 (3%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L E+ + C L + + ++M+IG P +N G+PF G G L Sbjct: 7 LKEIAQQVSECKRCQLHYSRKKAVPGEGPAQAEIMMIGEGPGFYENEQGRPFVGAAGKFL 66 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 D++L+ I R + I+ + PPGNR+ E+E C + RQIE ISPK+++ +G Sbjct: 67 DELLEKCGIARKDVFITNVVKCRPPGNRDPQPEELEACNAYLERQIEAISPKVIVTLGRF 126 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 + F W N + HP + P +K + L + Sbjct: 127 SMAKFLPGVKISEVHGQSFWRN------GRLIVPMFHPAAALHQPSLKASVERDFARLSE 180 Query: 257 ALKN 260 ++ Sbjct: 181 YVQA 184 >gi|289524505|ref|ZP_06441359.1| uracil-DNA glycosylase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289502255|gb|EFD23419.1| uracil-DNA glycosylase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 146 Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 4/150 (2%) Query: 88 HDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR 147 C L ++ ++ +LM +G P +++ G PF GK G +L+++ + I R Sbjct: 1 RKCPLSENRTQSVFGEGSKKTELMFVGEGPGADEDLQGLPFVGKAGQLLNQIFAAAGIDR 60 Query: 148 TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207 ++++I+ + PP NR + E C + QI L+ PKIL+ +GN + + Sbjct: 61 SEVYITNVVKCRPPQNRVPTVEECSACNDYLFAQISLVQPKILVTLGNTPTKWLLKTTHE 120 Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237 Q GK + I + HP L Sbjct: 121 GITQLRGKCFDWY----GIKLMPMFHPSYL 146 >gi|260436026|ref|ZP_05789996.1| uracil-DNA glycosylase [Synechococcus sp. WH 8109] gi|260413900|gb|EEX07196.1| uracil-DNA glycosylase [Synechococcus sp. WH 8109] Length = 187 Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats. Identities = 41/189 (21%), Positives = 75/189 (39%), Gaps = 12/189 (6%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 +L L + C L +T + + + DLM+IG P ++ G PF G++G Sbjct: 2 TLSSL-EACSACTACDLATTRHTVVMSRGNPKADLMLIGEAPGAQEDSQGVPFVGRSGRA 60 Query: 136 LDKMLQSIEI-MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 LD++L+ +++ ++I PP NR E+ CR + Q+E + P +++ G Sbjct: 61 LDQLLRDVDLDPEHDLYICNAIKCRPPNNRRPKKAELAACRAWLDLQLETVDPTVIVLTG 120 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK-----NTWH 249 Q G+W + + HP L++ P T Sbjct: 121 ATAVEAILGIKG-GMTQLRGQWQSWNERA----VMPIFHPSYLLRNPSKAAGAPLDLTRQ 175 Query: 250 ALITLKKAL 258 L +++ L Sbjct: 176 DLDAVRRRL 184 >gi|209550293|ref|YP_002282210.1| phage SPO1 DNA polymerase-related protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536049|gb|ACI55984.1| phage SPO1 DNA polymerase-related protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 484 Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats. Identities = 41/239 (17%), Positives = 95/239 (39%), Gaps = 17/239 (7%) Query: 35 ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94 A+ ESQ + + A Q + + A +L L + + C L + Sbjct: 248 ASAESQVRAMAAREATQSLPFHDRLQEAARNLPIEPEAPAGTLEALSAEAGACTRCPLHA 307 Query: 95 TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154 + T+ ++M +G P D ++I+G+PF G G +LD+++ + I R+ ++++ Sbjct: 308 KATQTVFGEGPRDAEVMFVGEQPGDQEDIAGRPFVGPAGKLLDQVIADVGIDRSALYVTN 367 Query: 155 ISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207 ++ + E++ CR + ++ L+ PK+++ +G + + Sbjct: 368 AVKHFKYEPRGKRRIHQKPNMGEVKHCRWWLDLELALVKPKLIVAMGATALAALTDVKER 427 Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH------ALITLKKALKN 260 GK + TVHP L++ P + ++ +++ + + Sbjct: 428 LQ-DVRGKAMAIE---GGRTLFVTVHPSYLLRIPDERLKAEEMVRFRNDMLEIQRLMAS 482 >gi|110635173|ref|YP_675381.1| phage SPO1 DNA polymerase-related protein [Mesorhizobium sp. BNC1] gi|110286157|gb|ABG64216.1| phage SPO1 DNA polymerase-related protein [Chelativorans sp. BNC1] Length = 206 Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 74/200 (37%), Gaps = 17/200 (8%) Query: 73 KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 K +L ++ + C L + T+ ++ +G P D +++ G+PF G Sbjct: 10 KLKTLDAVREDAQDCTRCDLYKNATQTVFGEGGNQARVVFVGEQPGDKEDVEGRPFVGPA 69 Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELI 185 G M D +L+ + I R + +++ + + E+ CR + +++ LI Sbjct: 70 GRMFDAILEEVGIDRKKTYVTNAVKHFKFELRGKRRIHSKPNAGEIRACRWWLDQELTLI 129 Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-- 243 P + + +G G + +P TVHP L++ P Sbjct: 130 QPDVAVALGATAARALVGKAVPVMT-LRGTITE---SAEGVPVFITVHPSSLLRVPDEMD 185 Query: 244 KKNTW----HALITLKKALK 259 ++ + +K +K Sbjct: 186 RRRARELFAEDMRKVKALMK 205 >gi|85716683|ref|ZP_01047652.1| phage SPO1 DNA polymerase-related protein [Nitrobacter sp. Nb-311A] gi|85696523|gb|EAQ34412.1| phage SPO1 DNA polymerase-related protein [Nitrobacter sp. Nb-311A] Length = 236 Score = 148 bits (373), Expect = 8e-34, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 76/201 (37%), Gaps = 17/201 (8%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 SL L++ C L + + +M++G P D ++++GKPF G Sbjct: 35 APPPSLAGLRAQAAGCRACPLWKDATQIVFGEGPAHAQIMLMGEQPGDREDLAGKPFVGP 94 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIEL 184 G MLD+ L+ I R +++++ ++ + E+ CR R++ Sbjct: 95 AGQMLDRALKEAGIDRKKVYVTNAVKHFKFVPRGKIRLHQKPNTPEIRACRQWYERELAT 154 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK 244 I+P +++ +G+ F ++ G ++ L TVHP L++ P Sbjct: 155 INPALVVAMGSTAAQSVFG-KITPINKSRGHLIDMK---DGRKALVTVHPSYLLRLPDQD 210 Query: 245 KNTWH------ALITLKKALK 259 L L+ Sbjct: 211 SRAREYERFVDDLKIAATQLQ 231 >gi|78212827|ref|YP_381606.1| phage SPO1 DNA polymerase-related protein [Synechococcus sp. CC9605] gi|78197286|gb|ABB35051.1| phage SPO1 DNA polymerase-related protein [Synechococcus sp. CC9605] Length = 187 Score = 148 bits (373), Expect = 8e-34, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 73/183 (39%), Gaps = 11/183 (6%) Query: 82 SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 + C L S+ + + + DLM+IG P ++ G PF G++G LD++L+ Sbjct: 7 EACSACTACDLASSRQTVVISRGNPKADLMLIGEAPGAQEDAQGVPFVGRSGCALDQLLR 66 Query: 142 SIEI-MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF 200 +++ ++I PP NR E+ CR + Q+E + PK+++ G Sbjct: 67 DVDLDPEHDLYICNAIKCRPPNNRRPKKTELAACRAWLDLQLEAVDPKVIVLTGATAVEA 126 Query: 201 FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK-----NTWHALITLK 255 + G+W + + HP L++ P T L ++ Sbjct: 127 ILGIKG-GMTRLRGEWQSWN----GREVMPIFHPSYLLRNPSKAAGAPLDLTRQDLSAVR 181 Query: 256 KAL 258 + L Sbjct: 182 RRL 184 >gi|33865707|ref|NP_897266.1| Uracil-DNA glycosylase [Synechococcus sp. WH 8102] gi|33632877|emb|CAE07688.1| Uracil-DNA glycosylase [Synechococcus sp. WH 8102] Length = 187 Score = 148 bits (373), Expect = 8e-34, Method: Composition-based stats. Identities = 43/186 (23%), Positives = 78/186 (41%), Gaps = 12/186 (6%) Query: 79 ELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDK 138 EL+ C L T + + LM+IG P ++ G+PF G++G +LD+ Sbjct: 5 ELRD-CEQCTGCDLALTRERVVISRGAATAPLMLIGEAPGAREDALGQPFVGRSGQLLDR 63 Query: 139 MLQSIEI-MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197 +LQ + + + ++I PP NR E+ CRP + QI+ ++P++++ +G Sbjct: 64 LLQDVGLNPESDLYICNAVKCRPPQNRRPKRAELTACRPWLDHQIDQVNPRVIVLLGATA 123 Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK-----KNTWHALI 252 Q G+W + + HP L++ P T L Sbjct: 124 VESLLGIKG-GMTQLRGQWLSWDGRD----VMPIFHPSYLLRNPSKASDAPTALTRSDLS 178 Query: 253 TLKKAL 258 T+++ L Sbjct: 179 TVQQRL 184 >gi|94496521|ref|ZP_01303097.1| Uracil-DNA glycosylase superfamily protein [Sphingomonas sp. SKA58] gi|94423881|gb|EAT08906.1| Uracil-DNA glycosylase superfamily protein [Sphingomonas sp. SKA58] Length = 476 Score = 148 bits (373), Expect = 8e-34, Method: Composition-based stats. Identities = 40/243 (16%), Positives = 82/243 (33%), Gaps = 20/243 (8%) Query: 32 NNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCH 91 + R+ I SA + + + ++ C Sbjct: 240 PDLVAGAQAREAAMIASAPRAPAQPGGGKAGKAGAGGNSGTA---WAAVREEALGCTRCP 296 Query: 92 LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH 151 L + T+ LM IG P D ++ +G+PF G G +LD+ L + R + + Sbjct: 297 LHQGATQTVFGEGPLDAPLMFIGEQPGDQEDQAGRPFVGPAGQLLDQALIEAGVDRARAY 356 Query: 152 ISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204 ++ ++ E++ CR + ++++++ P++++ +G Sbjct: 357 VTNAVKHFKFEARGKRRIHQTPDAGEVQACRWWLTQELDIVRPRLIVALGATAARAMLG- 415 Query: 205 DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW------HALITLKKAL 258 A + G L TVHP L++ P K L + + + Sbjct: 416 KAVTISRTRGSAITLDNGAEG---WVTVHPSYLLRVPDEAKKAEERARFVEDLRVIGERV 472 Query: 259 KNL 261 K L Sbjct: 473 KAL 475 >gi|268323165|emb|CBH36753.1| conserved hypothetical protein, uracil-DNA glycosylase superfamily [uncultured archaeon] Length = 195 Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 82/182 (45%), Gaps = 3/182 (1%) Query: 80 LKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKM 139 ++ ++ C L T + + ++ +G P ++++ GKPF GK G +LD++ Sbjct: 10 IEKEIKDCKRCELWKTRTNPVVGEGALSARILFVGEAPGYNEDLKGKPFVGKAGKVLDEL 69 Query: 140 LQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199 L+SI R I+I+ + PPGNRN E+ C P + Q+ELI P ++ +GN + Sbjct: 70 LESIGWQRANIYITNVLKCRPPGNRNPLTDEIRACTPFLDAQLELIEPAVIATLGNFSLA 129 Query: 200 FF---FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 + F +K + G + T I + HP + P +K+ L Sbjct: 130 YIFAKFQLKPEKIGEIHGNVFTVSTIAGIKRIIPLYHPAVVTYNPKMKEVLIDDFKVLAN 189 Query: 257 AL 258 + Sbjct: 190 TI 191 >gi|269925234|ref|YP_003321857.1| phage SPO1 DNA polymerase-related protein [Thermobaculum terrenum ATCC BAA-798] gi|269788894|gb|ACZ41035.1| phage SPO1 DNA polymerase-related protein [Thermobaculum terrenum ATCC BAA-798] Length = 206 Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats. Identities = 41/195 (21%), Positives = 72/195 (36%), Gaps = 19/195 (9%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 L ++ C L T + G +M +G P + ++ +G PF G+ G + Sbjct: 11 ELDRVREEALFCQRCTLWQTRTQVVFGAGKAGSKIMFVGEAPGEDEDRTGTPFVGRAGIL 70 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPK 188 LD++L+ I R +I+ I P NR E+ C P + +I L+ P Sbjct: 71 LDQLLEEAGIGRESTYITNIIRCRPTAVTQGKITNRAPRAGEVSACEPWMWLEIHLVKPS 130 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--------Y 240 +++ +G + + + G I +AT+HP L++ Y Sbjct: 131 VIVCVGAPAAKTLIDKNFRL-SDQRGDVYE---KEDGIRYIATLHPAYLLRLLSTDTEAY 186 Query: 241 PLIKKNTWHALITLK 255 K L K Sbjct: 187 QRAKGLVLQDLKKAK 201 >gi|146339650|ref|YP_001204698.1| putative Uracil-DNA glycosylase [Bradyrhizobium sp. ORS278] gi|146192456|emb|CAL76461.1| Putative Uracil-DNA glycosylase [Bradyrhizobium sp. ORS278] Length = 493 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 45/231 (19%), Positives = 90/231 (38%), Gaps = 19/231 (8%) Query: 35 ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94 A ++ + +T H+P + + + +A L L+ + C L Sbjct: 257 ADEGTEPHKPQKRVEETAMTRKPKAHAPAAETSRDV--EAVDLQTLREEAAACRACPLWK 314 Query: 95 TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154 + T+ E LM++G P D ++++G PF G G MLD+ L I R++++++ Sbjct: 315 DATQTVFGEGPEHAPLMLVGEQPGDKEDLAGHPFVGPAGQMLDRALAEAGIDRSKVYVTN 374 Query: 155 ISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207 ++ + E++ CRP R++ + P +++ +G F Sbjct: 375 AVKHFKFVPRGKIRLHQKPATPEIKACRPWYERELAAVQPALVVAMGASAAQAVFG-KIT 433 Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH------ALI 252 + +N G +L + TVHP L++ P + L Sbjct: 434 QVTKNRGHIVDLPEGAQ---AMITVHPSYLLRLPDAEAKAREYELFVKDLK 481 >gi|27378134|ref|NP_769663.1| hypothetical protein bll3023 [Bradyrhizobium japonicum USDA 110] gi|27351281|dbj|BAC48288.1| bll3023 [Bradyrhizobium japonicum USDA 110] Length = 469 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 41/205 (20%), Positives = 79/205 (38%), Gaps = 17/205 (8%) Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120 SP + A L L+ C L + T+ + +M++G P D Sbjct: 256 SPRPEAIMGHKAAANDLEALREEAAHCRACPLYKDATQTVFGEGPKDATIMLVGEQPGDK 315 Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEI 173 ++++G PF G G MLD+ L+ + R +++++ ++ + E++ Sbjct: 316 EDLAGHPFVGPAGQMLDRALEEAGVDRKKVYVTNAVKHFKFVPRGKIRLHQKPATPEIKA 375 Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 CRP R++ I P++++ +G F + G+ +L L TVH Sbjct: 376 CRPWYEREVAAIQPELIVAMGATAAQSVFG-KITPIGKTRGRLIDLP---DGRKALVTVH 431 Query: 234 PQELIQYPLIKKNTW------HALI 252 P L++ P + L Sbjct: 432 PSYLLRLPDPEAKVLEYQRFVEDLK 456 >gi|158424630|ref|YP_001525922.1| phage SPO1 DNA polymerase-related protein [Azorhizobium caulinodans ORS 571] gi|158331519|dbj|BAF89004.1| phage SPO1 DNA polymerase-related protein [Azorhizobium caulinodans ORS 571] Length = 472 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 88/237 (37%), Gaps = 18/237 (7%) Query: 36 TYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCST 95 E+ I + +++A A++A L L++ C L + Sbjct: 240 APLIADAERRAGEMIAHAATPANPRPHRLEKAALDAEQADGLEALRAQALGCRACPLWAP 299 Query: 96 SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMI 155 + T+ +M +G P D +++ G+PF G G + D+ LQ + R + +++ Sbjct: 300 ATQTVFGEGPTDAPVMFVGEQPGDQEDLDGRPFVGPAGRLFDQALQDAGLERARAYVTNA 359 Query: 156 SPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQK 208 +++ + +E+ C + R+I L+ P++++ +G A + Sbjct: 360 VKHFKFEPRGKRRLHQSPNPVEIRACNTWLAREIALVRPRLVVALGASAAQAVSG-RAVR 418 Query: 209 TYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH------ALITLKKALK 259 ++ G+ L L +VHP L++ P + L L Sbjct: 419 VGESRGRIMPLEGRD----ALVSVHPSYLLRLPDAEARAREYDRFVADLRLAAPYLA 471 >gi|297568259|ref|YP_003689603.1| phage SPO1 DNA polymerase-related protein [Desulfurivibrio alkaliphilus AHT2] gi|296924174|gb|ADH84984.1| phage SPO1 DNA polymerase-related protein [Desulfurivibrio alkaliphilus AHT2] Length = 277 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 93/262 (35%), Gaps = 17/262 (6%) Query: 11 QILTIALFYADSGVYWVFDEP--NNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQAD 68 + + L + + GV P Q ++ + + + P ++ Sbjct: 20 DLQGLVLLHRELGVDAYPASPGLLRLLQPSCQGRQGRDSAKTGELGAAKSPAPPARPRSS 79 Query: 69 SIAQKAC---SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISG 125 A+ L L + L+ C I + L++I P ++ +G Sbjct: 80 KSAEAEREVPDLTVLAAQLQDCRQCPHHQWRQKVIFGQGSAEARLLLIAGYPGAAEEGAG 139 Query: 126 KPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW-------HPPGNRNLSNIEMEICRPII 178 P G G +LD+ML +I++ R QI+++ + + C P + Sbjct: 140 LPCQGAAGELLDRMLAAIQLSRRQIYLTTLVKCIPEAARQAATSPAPPEPAAISACLPFL 199 Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238 +QI I P ++ +G + Q G++ IP + T+ P L+ Sbjct: 200 QQQIAAIRPALICTLGPLPAQALL-RTGKHLLQLRGRFHQY----RDIPLMPTLAPDFLL 254 Query: 239 QYPLIKKNTWHALITLKKALKN 260 P +KK W L ++K L+ Sbjct: 255 HNPEMKKYAWQDLQLIQKFLQK 276 >gi|147918737|ref|YP_687540.1| uracil-DNA glycosylase superfamily protein [uncultured methanogenic archaeon RC-I] gi|110622936|emb|CAJ38214.1| predicted uracil-DNA glycosylase superfamily protein [uncultured methanogenic archaeon RC-I] Length = 185 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 5/176 (2%) Query: 82 SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 + C L + + + + +M+IG P +++ GKPF G G +L+ +L+ Sbjct: 12 DDVLKCPRCDLSLSRTNVVIGSGPLDARIMLIGEAPGRNEDKQGKPFVGAAGKVLNLVLE 71 Query: 142 SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 S I R ++I+ + PP NR E+E C + +Q+E+ISPK+++ +G + Sbjct: 72 SAGIRRDDVYIANVVKCRPPENRVPKKDEIEACSVYLKKQLEVISPKVVVLLGKTAAESY 131 Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKA 257 G+ H + T HP +I +K ++KA Sbjct: 132 LGRKVVM-----GEEHGKPFKHEDRTVVITYHPAAIIYNRKLKDALESDFKVIRKA 182 >gi|190892718|ref|YP_001979260.1| uracil DNA glycosylase [Rhizobium etli CIAT 652] gi|190697997|gb|ACE92082.1| putative uracil DNA glycosylase protein [Rhizobium etli CIAT 652] Length = 484 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 39/237 (16%), Positives = 91/237 (38%), Gaps = 17/237 (7%) Query: 35 ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94 A+ ES+ +E + A + + + A +L L++ C L + Sbjct: 248 ASAESKVREMAAREATRSLPFHDRLQQAARNLPTEPEAPAGTLEALRAQASVCTRCPLHA 307 Query: 95 TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154 + T+ +M +G P D ++I+G+PF G G + D+++ I R+ ++++ Sbjct: 308 NATQTVFGEGPRDAAVMFVGEQPGDQEDIAGRPFVGPAGRLFDQVMAEAGIDRSMVYVTN 367 Query: 155 ISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207 ++ + E++ CR + ++ L+ PK+++ +G + + Sbjct: 368 SVKHFKYEPRGKRRIHQKPTMGEVKHCRWWLDLELALVEPKLIVAMGATALAALTDVKGR 427 Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK------KNTWHALITLKKAL 258 GK + TVHP L++ P + ++ ++ + Sbjct: 428 LQ-DVRGKAMAIE---GGRTLFVTVHPSYLLRIPDERLKAEEMARFRQDMLEIQGLM 480 >gi|83590984|ref|YP_430993.1| phage SPO1 DNA polymerase-related protein [Moorella thermoacetica ATCC 39073] gi|83573898|gb|ABC20450.1| phage SPO1 DNA polymerase-related protein [Moorella thermoacetica ATCC 39073] Length = 191 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 5/186 (2%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 L LK+ + C L + + + + G LM++G ++ G+PF+G G + Sbjct: 2 DLKGLKAKSPACRGCSLRTGTRQVVSGSGNPGAGLMLVGEGLGAREDRVGRPFAGAAGQL 61 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 L ++L++ R +++I+ I PPGNR + E+E CRP++ I+ + P+I++ +G Sbjct: 62 LGRLLKAAGFRREEVYITNIVKCRPPGNRMPESAEVEACRPLLDAAIDFVRPQIIVCLGA 121 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 + G+W I L T HP L++ L+ Sbjct: 122 LATRTLVAP-GASITRLRGRWIE----KDGIRYLPTFHPAALLRDGGKIPLVEEDFRKLR 176 Query: 256 KALKNL 261 A + L Sbjct: 177 AAYQAL 182 >gi|209884314|ref|YP_002288171.1| transcriptional regulator, Fis family [Oligotropha carboxidovorans OM5] gi|209872510|gb|ACI92306.1| transcriptional regulator, Fis family [Oligotropha carboxidovorans OM5] Length = 209 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 43/200 (21%), Positives = 80/200 (40%), Gaps = 17/200 (8%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 +L +L+ CHL + T+ +M +G P D ++++G+PF G G Sbjct: 14 ENLADLREEAAHCRACHLYKNATQTVFGEGAAHAAVMFVGEQPGDKEDLAGRPFVGPAGQ 73 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISP 187 +LD+ L+ I R + +I+ ++ + E++ CRP R++ + P Sbjct: 74 VLDRGLKEAGIARNKTYITNAVKHFKFVPRGKIRLHQKPTTPEIKACRPWYERELATVKP 133 Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIK- 244 +++ +G F +N G+ +L L TVHP L++ P K Sbjct: 134 ALVVAMGATAAQCVFG-KITPIGKNRGRLFDLAEDA---KALVTVHPSYLLRLPDPDSKE 189 Query: 245 ---KNTWHALITLKKALKNL 261 K L L+ + Sbjct: 190 REYKQFVSDLKLAASYLREI 209 >gi|327192707|gb|EGE59644.1| putative uracil DNA glycosylase protein [Rhizobium etli CNPAF512] Length = 484 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 40/237 (16%), Positives = 93/237 (39%), Gaps = 17/237 (7%) Query: 35 ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94 A+ ES+ +E + A Q + + + A +L L++ C L + Sbjct: 248 ASAESKVREMAAREATQSLPFHDRLQQASHNRTREPEAPAGTLEALRAEAAVCTRCPLHA 307 Query: 95 TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154 + T+ +M +G P D ++I+G+PF G G + D+++ I R+ ++++ Sbjct: 308 KATQTVFGEGPRDAAVMFVGEQPGDQEDIAGRPFVGPAGKLFDQVIAEAGIDRSTLYVTN 367 Query: 155 ISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207 ++ + E++ CR + ++ L+ PK+++ +G + + Sbjct: 368 SVKHFKYEPRGKRRIHQKPTMGEVKHCRWWLDLELTLVEPKLIVAMGATALAALTDMKDR 427 Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK------KNTWHALITLKKAL 258 GK + TVHP L++ P + ++ +++ + Sbjct: 428 LQ-DVRGKAMAIE---GGRTLFVTVHPSYLLRIPDERLKAEEMARFRQDMLEIQRLM 480 >gi|319780107|ref|YP_004139583.1| phage SPO1 DNA polymerase-related protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317165995|gb|ADV09533.1| phage SPO1 DNA polymerase-related protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 485 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 38/239 (15%), Positives = 88/239 (36%), Gaps = 17/239 (7%) Query: 35 ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94 A ++ + + P Q ++ A ++ EL+ + C L Sbjct: 251 ADKAAKDMIAKMPTTPAPHHAKVQARHWPKQPVEAPEDDASTIPELREAAKGCRRCPLWR 310 Query: 95 TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154 + T+ + ++ +G P D ++++GKPF G G + D +L + R +++++ Sbjct: 311 DATQTVFGEGPDNAKVIFVGEQPGDQEDLAGKPFVGPAGKVFDAILDDAGVDRQKVYVTN 370 Query: 155 ISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207 + ++ E++ CR I ++ ELI P + + +G A Sbjct: 371 AVKHFKFEPRGKRRIHSKPNSGEIQACRWWIDQEFELIKPNLAVALGATAAMSLLG-KAI 429 Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIK----KNTWHALITLKKALKN 260 + G+ + T+HP ++ + P K + + +K+ + Sbjct: 430 PVTKMRGQVIE---REDGLRVFITIHPSFILRIREPADKEAERERFLQDMKLVKRLMAA 485 >gi|327311693|ref|YP_004338590.1| phage SPO1 DNA polymerase-like protein [Thermoproteus uzoniensis 768-20] gi|326948172|gb|AEA13278.1| phage SPO1 DNA polymerase-related protein [Thermoproteus uzoniensis 768-20] Length = 198 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 4/182 (2%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L E+ +R C L T + + +MI+G P + ++ G+PF G G +L Sbjct: 5 LLEIAERIRGCTRCRLHETRRLAVPGEGRAEKGIMIVGEAPGEKEDEEGRPFVGPAGRLL 64 Query: 137 DKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 +L I R + I+ + PPGNR E+ C P ++ QI I P++++ +G Sbjct: 65 TSILTRYGIDRGRDVFITNVVKCRPPGNREPLEDEIAACTPYLVEQIAAIRPRLIVALGV 124 Query: 196 KTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 + K GK + T HP + P ++ L Sbjct: 125 HSARTLMSFAGRRVAKITDVRGKCFKVRIAGVETTLCVTYHPAAALYNPRLRTTLEEDLR 184 Query: 253 TL 254 Sbjct: 185 RF 186 >gi|332284994|ref|YP_004416905.1| uracil-DNA glycosylase [Pusillimonas sp. T7-7] gi|330428947|gb|AEC20281.1| uracil-DNA glycosylase [Pusillimonas sp. T7-7] Length = 286 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 52/223 (23%), Positives = 84/223 (37%), Gaps = 8/223 (3%) Query: 40 QRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLST 99 Q + + + QP SP + + + L S + C L Sbjct: 63 QATRELLRTPPQPKAKQPAPESPEMPRLPV----PETWEALISHIAGCQACGLHVGRSHA 118 Query: 100 ICATQTEG-QDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISP 157 + E + +++G P D+ +G PF GK G +L ML SI++ + + Sbjct: 119 VSGAGAEHMPEWLVVGEAPGSVDDRTGLPFQGKAGQLLQAMLASIQVTEQTPVFFTNVIK 178 Query: 158 WHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS 217 P GNR + E+E C P + RQI L+ P +L +G+ GK Sbjct: 179 CRPLGNRTPTQDEIEACMPYLQRQIALLKPHRILALGSLAAQAVLGLQNDLEA-LRGKVH 237 Query: 218 NLCTP-HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 + + IP + T HP L+ P K + W L + L Sbjct: 238 AMRSEADQDIPVVVTYHPTALLLRPQHKPDAWRDLNLARTLLA 280 >gi|167045662|gb|ABZ10310.1| putative Uracil DNA glycosylase superfamily protein [uncultured marine crenarchaeote HF4000_APKG10L15] Length = 191 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 85/186 (45%), Gaps = 6/186 (3%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 SL ++ ++ C+LC T + + + D++ IG P +++ G+PF G G Sbjct: 6 SLKIIQEKVKICKKCNLCFTRKNAVPGKGNQNADIVFIGEAPGKNEDQHGEPFIGTAGKK 65 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 L+ L+++ + R ++I+ I PP NR ++IE +C + +I +I+PKI+ +GN Sbjct: 66 LNDALENVGLTRNSVYITNIVKCRPPNNRVPNDIEKAMCSNYLEDEIAIINPKIICLLGN 125 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 ++ +N GK+ T HP I + K + + L Sbjct: 126 TPFYSILG--GKEISKNHGKFVYKDNRMY----FVTFHPAATIYNQKLGKVFKNDIRKLM 179 Query: 256 KALKNL 261 K L+ L Sbjct: 180 KELQKL 185 >gi|159900927|ref|YP_001547174.1| phage SPO1 DNA polymerase-related protein [Herpetosiphon aurantiacus ATCC 23779] gi|159893966|gb|ABX07046.1| phage SPO1 DNA polymerase-related protein [Herpetosiphon aurantiacus ATCC 23779] Length = 220 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 79/180 (43%), Gaps = 4/180 (2%) Query: 82 SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 + C LC T + + ++++IG P ++ G+PF G +G++L++ L Sbjct: 13 EEVAQCTACPLCRTRTNAVPGEGPANAEILLIGEGPGQREDALGRPFVGPSGDLLEQWLA 72 Query: 142 SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 I + R Q+ I+ + PPGNR+ E+ C + RQI ++PK++ +G + N F Sbjct: 73 EIGLTREQVFIANVVKCRPPGNRDPEPSEIAACAHFLDRQIAALAPKLIATLGRHSMNKF 132 Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 F K + G + + L HP +++ + + + + + L Sbjct: 133 F--PGGKITKIHG-IRGVKRQGQTV-FLPLFHPAYVLRNMNAMPDAIADIKLIPRLIARL 188 >gi|284047489|ref|YP_003397828.1| phage SPO1 DNA polymerase-related protein [Acidaminococcus fermentans DSM 20731] gi|283951710|gb|ADB46513.1| phage SPO1 DNA polymerase-related protein [Acidaminococcus fermentans DSM 20731] Length = 215 Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 10/195 (5%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 + A + ELK L C L + + LMI+G P ++ G P G Sbjct: 2 EPAKTFDELKKQLEDCAACPLRKDCQAPVGWFGNLESPLMIVGEGPGGVEDDYGCPLIGP 61 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP-IIMRQIELISPKIL 190 +G +LDK L S+ I R +I+ + + P GNR + E C + ++I L+ PK++ Sbjct: 62 SGQLLDKALWSVRITRDRIYTTNVIKCRPRGNRTPTVEEGSFCARLWLEQEIRLLRPKVI 121 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ-----YPLIKK 245 L +G+ +F +A + + G+W IP LAT HP L++ K Sbjct: 122 LALGSVALRYFKGPEA-RITRERGQWFTT---GEGIPCLATFHPSYLLRLTGQAQIAAKW 177 Query: 246 NTWHALITLKKALKN 260 + +H L +K ++ Sbjct: 178 DVFHDLEAVKAKVEE 192 >gi|294666301|ref|ZP_06731551.1| uracil DNA glycosylase superfamily protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292603952|gb|EFF47353.1| uracil DNA glycosylase superfamily protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 478 Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 92/267 (34%), Gaps = 38/267 (14%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60 M K + + + ++GV A + + + +A P+ + Sbjct: 225 MPQKYWKNLPEAALLPELIREAGVRV-----REMAERAPEPVRRRVPAAPAPLPEVAT-- 277 Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120 SL +L++ R C L + T+ + +M+IG P D Sbjct: 278 --------------QSLAQLRTAARDCRRCELWQPATQTVFGEGPDDASVMVIGEQPGDE 323 Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEI 173 +++SG+PF G G + + L + + R + +++ +RN ++ Sbjct: 324 EDLSGRPFVGPAGRLFNMALGELGVDREKFYVTNAVKHFRFEQRGKRRLHRNPERTHVQA 383 Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 C + + + P ++ +G + + Q G+W L P L TVH Sbjct: 384 CSGWLQAERAQLRPAQIVCLGATAAQAVLGSRFRLMQQ-RGQWQRL---DDGTPVLTTVH 439 Query: 234 PQELIQYPLIK------KNTWHALITL 254 P +++ P + L L Sbjct: 440 PSWVLRQPSTDAREEGYRGFVEDLRRL 466 >gi|160902797|ref|YP_001568378.1| phage SPO1 DNA polymerase-related protein [Petrotoga mobilis SJ95] gi|160360441|gb|ABX32055.1| phage SPO1 DNA polymerase-related protein [Petrotoga mobilis SJ95] Length = 226 Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 45/196 (22%), Positives = 86/196 (43%), Gaps = 11/196 (5%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 +K ++ + + C L T +T+ + +M +G P ++ G+PF G+ Sbjct: 8 EKQKNIEMIAKRIEVCEKCPLNLTRTNTVPGSGNVDSPIMFVGEGPGADEDALGEPFVGR 67 Query: 132 TGNMLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 G +L+KML + ++ R + I+ I PP NR + E++ C+ + QI +I PKI+ Sbjct: 68 AGQLLEKMLKEYAKLERNDVFITNIVKCRPPQNRVPTQEEVKSCQSYLDGQIIVIKPKII 127 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KK 245 + +GN +F Q+ G++ N + I T HP L++ K Sbjct: 128 VTLGNTPLYYFTGESK--ITQSRGRFFNW---YGDIKIFPTFHPSYLLRNQSSTKGSPKW 182 Query: 246 NTWHALITLKKALKNL 261 + + + + L Sbjct: 183 YAYLDMRIIGIMYRAL 198 >gi|294625714|ref|ZP_06704335.1| DNA polymerase related protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600018|gb|EFF44134.1| DNA polymerase related protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 478 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 92/267 (34%), Gaps = 38/267 (14%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60 M K + + + D+GV A + + + +A P+ + Sbjct: 225 MPQKYWKNLPEATLLPELIRDAGVRV-----REMAERAPEPVRRRVPAAPAPLPEVAT-- 277 Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120 SL +L++ R C L + T+ + +M+IG P D Sbjct: 278 --------------QSLAQLRTAARDCRRCELWQPATQTVFGEGPDDASVMVIGEQPGDE 323 Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEI 173 +++SG+PF G G + + L + + R + +++ +RN ++ Sbjct: 324 EDLSGRPFVGPAGRLFNMALGELGVDREKFYVTNAVKHFRFEQRGKRRLHRNPERTHVQA 383 Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 C + + + P ++ +G + + Q G+W L P L TVH Sbjct: 384 CSGWLQAERAQLRPAQVVCLGATAAQAVLGSRFRLMQQ-RGQWQRL---DDGTPVLITVH 439 Query: 234 PQELIQYPLIK------KNTWHALITL 254 P +++ P + L L Sbjct: 440 PSWVLRQPSTDAREEGYRGFVEDLRRL 466 >gi|87125791|ref|ZP_01081634.1| Uracil-DNA glycosylase [Synechococcus sp. RS9917] gi|86166600|gb|EAQ67864.1| Uracil-DNA glycosylase [Synechococcus sp. RS9917] Length = 341 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 87/230 (37%), Gaps = 13/230 (5%) Query: 37 YESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHE--LKSLLRSFHDCHLCS 94 ++++ + + R + A + ++ L + R C L Sbjct: 105 EPARQEPFGAECWLADPEGNRLLLLSTAASATKAHSNDDTTNDTTLATACRQCQACDLAG 164 Query: 95 TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HIS 153 + + + + LM+IG P S++ G+PF G++G +LD++L+ +I Sbjct: 165 SRRQVVISRGSAAAPLMLIGEAPGASEDAEGRPFVGRSGRLLDQLLRETGFNPDHDLYIC 224 Query: 154 MISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL 213 PPGNR E+ CRP + +QI L++P ++ +G+ Sbjct: 225 NAVKCRPPGNRKPKRQELAACRPWLEQQIALVNPAVVALLGSTALAAVLEERG-PITGLR 283 Query: 214 GKWSNLCTPHSIIPTLATVHPQELIQYPLIKK-----NTWHALITLKKAL 258 G+W + HP L++ P + T L +++ L Sbjct: 284 GQWIERDGRAW----MPLFHPSYLLRNPSTQPGRPLDLTRSDLRQIRERL 329 >gi|223939226|ref|ZP_03631107.1| phage SPO1 DNA polymerase-related protein [bacterium Ellin514] gi|223892058|gb|EEF58538.1| phage SPO1 DNA polymerase-related protein [bacterium Ellin514] Length = 201 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 51/205 (24%), Positives = 81/205 (39%), Gaps = 9/205 (4%) Query: 60 HSPLVQQADSIAQK--ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117 ++Q A A+ L L S +R C L + + +MIIG P Sbjct: 3 SRSVIQSAPGPAKSKVVKELESLDSKIRVCTACPLYKSRTLAVPGEGKFNSKVMIIGEAP 62 Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP- 176 +++++G+PF G +G LD +L+ E R+ I+ I PP NR E+E C Sbjct: 63 GRNEDLTGRPFVGSSGKFLDHVLEGSEFDRSDFFITNICKCRPPSNRTPKTGEIETCTSL 122 Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236 + RQIELI+P+I++ +G + + H L T HP Sbjct: 123 YLYRQIELINPRIIVLLGGVAVKKMLGKKTVEEARCG------IVEHEGRKFLVTYHPAV 176 Query: 237 LIQYPLIKKNTWHALITLKKALKNL 261 + + LK +K L Sbjct: 177 RFYREELAEKIKEDFALLKSEMKKL 201 >gi|269836973|ref|YP_003319201.1| phage SPO1 DNA polymerase-like protein [Sphaerobacter thermophilus DSM 20745] gi|269786236|gb|ACZ38379.1| phage SPO1 DNA polymerase-related protein [Sphaerobacter thermophilus DSM 20745] Length = 202 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 75/184 (40%), Gaps = 6/184 (3%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 SL + + +R C L + + ++M IG P ++ G PF G G Sbjct: 3 ASLDTIAARVRVCTQCELHRMRTNAVPGNGNPNAEVMFIGEGPGWHEDRQGLPFVGAAGQ 62 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 L++MLQSI + R ++ I+ I PPGNR+ E+ C + QI I PK+++ +G Sbjct: 63 FLNEMLQSIGLSRDEVFITNIVKCRPPGNRDPLPDEIAACSAYLDAQIAAIKPKVIVTLG 122 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 + +F N+ + + + HP + ++ + L Sbjct: 123 RFSMARWFPNERIS------RIHGQPRRFGDVVVVPMYHPAAALHQSSLRATIEADMAKL 176 Query: 255 KKAL 258 + L Sbjct: 177 PQIL 180 >gi|58039995|ref|YP_191959.1| bacteriophage-type DNA polymerase [Gluconobacter oxydans 621H] gi|58002409|gb|AAW61303.1| Bacteriophage-type DNA polymerase [Gluconobacter oxydans 621H] Length = 281 Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 71/279 (25%), Positives = 122/279 (43%), Gaps = 21/279 (7%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSID--------SAIQ 51 MT + ++S+ ++L + G + P + + + R S+ +A + Sbjct: 1 MTPQPVVSRAELLAALQLQYEWGADEALCELPVDRLSEAAPRLPASMPQREGEGQRTAAR 60 Query: 52 PITNIRHIHSPLVQQADSIA---------QKACSLHELKSLLRSFHDCHLCSTSLSTICA 102 P+ + P + +A +KA L L L + D L T+ + Sbjct: 61 PLPEMWDGTRPAGAKVTGVATGSLSLQALEKAPDLPTLMRLTEAPDDLFLARTATHRLEP 120 Query: 103 TQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG 162 E M+IG P ++ SG F+G+ G +L+KML+S + R QI ++ PW PPG Sbjct: 121 VFVEDAPFMLIGEAPDADEDRSGTLFAGEAGALLEKMLRSAGLERGQISMAPALPWRPPG 180 Query: 163 NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP 222 R S+ EM+ C P+++R I L P+ L+ +G DA + GKW+ + P Sbjct: 181 GRTPSDTEMQACHPLLLRTIALCRPRFLVTMGVTPLKMLLGPDAAV-GRLRGKWTEVSVP 239 Query: 223 H--SIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 + +P L HP +L ++N W L+ L + L Sbjct: 240 GLATPVPLLPMRHPLQLRASAAARRNAWQDLLILMEKLA 278 >gi|325919263|ref|ZP_08181307.1| uracil-DNA glycosylase, family 4 [Xanthomonas gardneri ATCC 19865] gi|325550268|gb|EGD21078.1| uracil-DNA glycosylase, family 4 [Xanthomonas gardneri ATCC 19865] Length = 479 Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 44/237 (18%), Positives = 78/237 (32%), Gaps = 17/237 (7%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P E R+ + V A SL +L+ R C Sbjct: 234 PEASLLPELIREAGVRVREMAERAPEPVRRRVPVAPAPIPEVATQSLAQLRVAARDCRRC 293 Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150 L + T+ +M+IG P D +++SG+PF G G + + L I I R + Sbjct: 294 ALWQPATQTVFGEGPNDASVMVIGEQPGDEEDLSGRPFVGPAGRLFNMALGEIGIDRATV 353 Query: 151 HISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 +++ +RN ++ C + + + P ++ +G Sbjct: 354 YVTNAVKHFRFEQRGKRRLHRNPERAHVQACSGWLHAERAQLRPAQIVCLGATAAQAVLG 413 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK------KNTWHALITL 254 + + G+W L P L TVHP +++ P + L L Sbjct: 414 -SGFRLMRERGQWQRL---DDGTPVLTTVHPSWVLRQPTTAAREEGYRGFVEDLRQL 466 >gi|86358569|ref|YP_470461.1| putative uracil DNA glycosylase protein [Rhizobium etli CFN 42] gi|86282671|gb|ABC91734.1| putative uracil DNA glycosylase protein [Rhizobium etli CFN 42] Length = 484 Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 39/239 (16%), Positives = 90/239 (37%), Gaps = 17/239 (7%) Query: 35 ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94 A+ ES+ + + A Q + + A +L L++ C L + Sbjct: 248 ASAESKVRAMAAREATQSLPFHERLQQAARNLPAEPELPAGTLEALRAEAAVCMRCPLHA 307 Query: 95 TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154 + T+ +M +G P D ++I+G+PF G G + D+++ I R+ ++++ Sbjct: 308 NATQTVFGEGPRDAAVMFVGEQPGDQEDIAGRPFVGPAGKLFDQVIAEAGIDRSMLYVTN 367 Query: 155 ISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207 ++ + E++ CR + ++ L+ PK+++ +G + + Sbjct: 368 AVKHFKYEPRGKRRIHQKPTMGEVKQCRWWLDLELALVKPKLIVAMGATALAALTDVTGR 427 Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH------ALITLKKALKN 260 GK + VHP L++ P + ++ ++ +K Sbjct: 428 LQ-DVRGKAMAIE---GGRTLFVIVHPSYLLRIPDERLKAEEMLRFRQDMMEIRGLMKA 482 >gi|73748279|ref|YP_307518.1| putative uracil-DNA glycosylase [Dehalococcoides sp. CBDB1] gi|73659995|emb|CAI82602.1| putative uracil-DNA glycosylase [Dehalococcoides sp. CBDB1] Length = 206 Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 6/190 (3%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 K L + + C+L +T ++ +M IG P +++ G+PF G Sbjct: 3 DKEELLKGIYIEIARCVRCNLHTTRTCSVPGEGNADAKIMFIGEAPGFNEDQQGRPFVGA 62 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191 G L +++ SI + R ++I+ + PPGNR+ E+ C + RQIE+I PKI++ Sbjct: 63 AGKFLTELICSIGLTREDVYITNVVKDRPPGNRDPLPDEISACCNFLDRQIEIIKPKIIV 122 Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 +G + +F K I HP + ++K + Sbjct: 123 TLGRFSMARYFTGITIS------KIHGQPMRRDGIIYYPMYHPAAALHQGGLRKEIEQDM 176 Query: 252 ITLKKALKNL 261 + + + L+ L Sbjct: 177 LRIPRLLEEL 186 >gi|307293602|ref|ZP_07573446.1| phage SPO1 DNA polymerase-related protein [Sphingobium chlorophenolicum L-1] gi|306879753|gb|EFN10970.1| phage SPO1 DNA polymerase-related protein [Sphingobium chlorophenolicum L-1] Length = 465 Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats. Identities = 42/245 (17%), Positives = 83/245 (33%), Gaps = 12/245 (4%) Query: 24 VYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSL 83 + + E + + + + + A A + L+ Sbjct: 218 IGAMLSEMPRKYWRNLPEAALIPELVAGAQAREAAMIATPARPAARRGNAAPAWQALRDE 277 Query: 84 LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143 C L + T+ LM IG P D ++++G+PF G G + D+ L+ Sbjct: 278 AMGCTRCPLYRDTTQTVFGEGPVDAPLMFIGEQPGDQEDLAGRPFVGPAGQLFDRALEEA 337 Query: 144 EIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 I R Q +++ ++ E++ CR + +++ELI P+I++ +G Sbjct: 338 GIDRRQAYVTNAVKHFKHERRGKRRIHQTPETPEIQACRWWLTQELELIRPRIIVALGAT 397 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 A + G L TVHP L++ P + + Sbjct: 398 AGRALLG-KAVTISRVRGAPIALEGGAQG---WITVHPSYLLRVPDEARKAEE-RKRFVE 452 Query: 257 ALKNL 261 L+ + Sbjct: 453 ELREI 457 >gi|282163588|ref|YP_003355973.1| uracil-DNA glycosylase [Methanocella paludicola SANAE] gi|282155902|dbj|BAI60990.1| uracil-DNA glycosylase [Methanocella paludicola SANAE] Length = 182 Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 71/179 (39%), Gaps = 5/179 (2%) Query: 82 SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 + C L + + + + +M+IG P +++ G+PF G G L+++L+ Sbjct: 9 DDVLHCPRCDLKLSRTNVVVGSGPINAKIMLIGEAPGKNEDKQGQPFVGAAGRNLNELLE 68 Query: 142 SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 I R ++I+ I PP NR + E+E C P + +QIE+I PK ++ +G Sbjct: 69 EAGIDRKDVYITNIVKCRPPENRPPFDYEVEACHPYLQKQIEVIGPKGIVLLGKTAAETM 128 Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 + GK L T HP +I +K + L Sbjct: 129 LGRKVEM-----GKEHGTVVEKDGHRYLITYHPAAMIYKRTLKDTLVEDYKKISALLAE 182 >gi|78049381|ref|YP_365556.1| uracil DNA glycosylase superfamily protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78037811|emb|CAJ25556.1| uracil DNA glycosylase superfamily protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 478 Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 93/267 (34%), Gaps = 38/267 (14%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60 M K + + + ++GV A + + + +A P+ ++ Sbjct: 225 MPQKYWKNLPEATLLPELIREAGVRV-----REMAERAPEPVRRRVPAAPAPLPDVVT-- 277 Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120 SL +L++ R C L + T+ + +M+IG P D Sbjct: 278 --------------QSLAQLRTAARDCRRCELWQPATQTVFGEGPDDASVMVIGEQPGDE 323 Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEI 173 +++SG+PF G G + + L + + R + +++ +RN ++ Sbjct: 324 EDLSGRPFVGPAGRLFNMALGELGVDREKFYVTNAVKHFRFEQRGKRRLHRNPERTHVQA 383 Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 C + + + P ++ +G + + + G+W L P L TVH Sbjct: 384 CSGWLQAERAQLRPAQIVCLGATAAQAVLGSSFRLM-RERGQWQRL---DDGTPVLTTVH 439 Query: 234 PQELIQYPLIK------KNTWHALITL 254 P +++ P + L L Sbjct: 440 PSWVLRQPSTDAREEGYRGFVEDLRRL 466 >gi|77462785|ref|YP_352289.1| putative uracil-DNA glycosylase [Rhodobacter sphaeroides 2.4.1] gi|77387203|gb|ABA78388.1| putative uracil-DNA glycosylase [Rhodobacter sphaeroides 2.4.1] Length = 474 Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats. Identities = 39/241 (16%), Positives = 83/241 (34%), Gaps = 17/241 (7%) Query: 34 EATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLC 93 E E Q + A + + A +L E K+ C L Sbjct: 237 ERAAEMQAAAPTEPPARTAAVARQRAAAAGGPAAAGDGSAPGTLAEAKTAAEGCRRCGLW 296 Query: 94 STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHIS 153 + + + +MI+G P D ++++G+PF G G + D+ + + R ++++ Sbjct: 297 ANATQVVFGEGPATARMMIVGEQPGDREDLAGRPFVGPAGQLFDEEAAAAGLDRGSVYVT 356 Query: 154 MISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206 ++ E+ CR + + +L+ P++++ +G Sbjct: 357 NAVKHFKFAPRGKRRIHQKPDAGEVTACRWWLDLERDLVRPRLIVAMGATALASLTG-SG 415 Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP------LIKKNTWHALITLKKALKN 260 + G L P TVHP +++ P ++ L ++ L+ Sbjct: 416 AGILKRRGSVERL---DDGTPVFVTVHPSYILRLPDEAARVEERRRFRDDLQAARQLLER 472 Query: 261 L 261 L Sbjct: 473 L 473 >gi|270307805|ref|YP_003329863.1| uracil DNA glycosylase superfamily, DNA polymerase bacteriophage-type [Dehalococcoides sp. VS] gi|270153697|gb|ACZ61535.1| uracil DNA glycosylase superfamily, DNA polymerase bacteriophage-type [Dehalococcoides sp. VS] Length = 206 Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats. Identities = 44/190 (23%), Positives = 78/190 (41%), Gaps = 6/190 (3%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 K L + S + C L +T ++ +M IG P +++ G+PF G Sbjct: 3 DKEELLKGVYSEITRCVRCKLHTTRTRSVPGEGNADAKIMFIGEAPGFNEDQQGRPFVGA 62 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191 G L +++ SI + R ++I+ + PPGNR+ E+ CR + RQIE+I PKI++ Sbjct: 63 AGKFLTELIHSIGLTREDVYITNVVKDRPPGNRDPLPDEISACRNFLDRQIEIIKPKIIV 122 Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 +G + +F K I HP + ++K + Sbjct: 123 TLGRYSMARYFTGITIS------KIHGQPMRRDGIIYYPMYHPAAALHQGGLRKEIEQDM 176 Query: 252 ITLKKALKNL 261 + + + L Sbjct: 177 LRIPGLVAEL 186 >gi|166713584|ref|ZP_02244791.1| DNA polymerase related protein [Xanthomonas oryzae pv. oryzicola BLS256] Length = 481 Score = 145 bits (365), Expect = 6e-33, Method: Composition-based stats. Identities = 44/237 (18%), Positives = 79/237 (33%), Gaps = 17/237 (7%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P E R+ + A SL +L+S R C Sbjct: 234 PEAALLPELIREAGVRVREMAERAPAPVRRRVPAAPAPQPDTTTHSLAQLRSAARDCRRC 293 Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150 L + T+ + +M+IG P D +++SG+PF G G + L + + R + Sbjct: 294 ELWQPATQTVFGEGPDDASVMVIGEQPGDEEDLSGRPFVGPAGRLFTMALGELGVDRQRF 353 Query: 151 HISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 +++ +RN ++ C + + + P ++ +G Sbjct: 354 YVTNAVKHFRFEQRGKRRLHRNPERAHVQACSGWLQAERTQLRPAQIVCLGATAAQAVLG 413 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK------KNTWHALITL 254 + Q G+W L P LATVHP +++ P + L L Sbjct: 414 -SGFRLMQERGQWQRL---DDGTPILATVHPSWVLRQPSTDAREEGYRGFVEDLRQL 466 >gi|116253162|ref|YP_769000.1| helicase/glycosylase [Rhizobium leguminosarum bv. viciae 3841] gi|115257810|emb|CAK08908.1| putative helicase/glycosylase [Rhizobium leguminosarum bv. viciae 3841] Length = 484 Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats. Identities = 42/237 (17%), Positives = 96/237 (40%), Gaps = 17/237 (7%) Query: 35 ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94 A+ ES+ + + A Q + + A +L L++ C L + Sbjct: 248 ASAESKVRAMAAREATQSLPFHDRLQEAARGIPAEPEAPAGTLEALRAEAAGCTRCPLHA 307 Query: 95 TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154 + T+ ++M++G P D ++I+G+PF G G +LD+++ I R+ ++++ Sbjct: 308 KATQTVFGEGPLDAEVMLVGEQPGDQEDIAGRPFVGPAGRLLDQVITEAGIDRSMLYVTN 367 Query: 155 ISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207 ++ + E++ CR + ++ LI PK+++ +G + + Sbjct: 368 AVKHFKYEPRGKRRIHQKPNMGEVKHCRWWLNLEMALIKPKLVVAMGATALAALTDTKQR 427 Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK------KNTWHALITLKKAL 258 GK + + TVHP L++ P + ++T+++ + Sbjct: 428 LQ-DVRGKAIAIDERRT---LFVTVHPSYLLRIPDERLKADELARFREDMLTIQRLM 480 >gi|289662533|ref|ZP_06484114.1| uracil DNA glycosylase superfamily protein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 481 Score = 145 bits (365), Expect = 8e-33, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 81/237 (34%), Gaps = 17/237 (7%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P E R+ + V A +L +L+S R C Sbjct: 234 PEAALLPELIREAGVRVREMAERAPEPVRRRVPVAPAPMPDVATQNLAQLRSAARDCRRC 293 Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150 L + T+ + +M+IG P D +++SG+PF G G + + L + + R + Sbjct: 294 ELWQPATQTVFGEGPDDASVMVIGEQPGDEEDLSGRPFVGPAGRLFNMALGELGVDRERF 353 Query: 151 HISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 +++ +RN ++ C + + + P ++ +G Sbjct: 354 YVTNAVKHFRFEQRGKRRLHRNPERTHVQACSGWLQAERAQLRPAQIICLGATAAQAVLG 413 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK------KNTWHALITL 254 + + Q G+W L P L TVHP +++ P + L L Sbjct: 414 SSFRLM-QERGQWQRLE---DGTPVLTTVHPSWVLRQPSTDAREEGYRGFVEDLRRL 466 >gi|91976376|ref|YP_569035.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas palustris BisB5] gi|91682832|gb|ABE39134.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas palustris BisB5] Length = 480 Score = 145 bits (365), Expect = 8e-33, Method: Composition-based stats. Identities = 42/231 (18%), Positives = 79/231 (34%), Gaps = 24/231 (10%) Query: 35 ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94 A + + +A + S + D L L+ R C L Sbjct: 250 AERAAHAMIAAEATAPKKPQRQEQPMSRAGHEGDR-------LETLREQARDCRACDLWK 302 Query: 95 TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154 + T+ +M++G P D ++++G PF G G MLD+ L I R + +++ Sbjct: 303 DATQTVFGEGPPHASVMLVGEQPGDKEDLAGHPFVGPAGQMLDRALAEAGIDRAETYVTN 362 Query: 155 ISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207 ++ + E++ CRP R++ + P++++ +G Sbjct: 363 AVKHFKFVPRGKIRLHQKPAMPEIKACRPWYERELAAVRPQLVVAMGATAAQSVLG-RIT 421 Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH------ALI 252 +N G + L TVHP L++ P L Sbjct: 422 PINKNRGHLID---RDGGPQVLVTVHPSYLLRLPDDDAKAREYARFVDDLK 469 >gi|289669765|ref|ZP_06490840.1| uracil DNA glycosylase superfamily protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 481 Score = 144 bits (364), Expect = 8e-33, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 81/237 (34%), Gaps = 17/237 (7%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P E R+ + V A +L +L+S R C Sbjct: 234 PEAALLPELIREAGVRVREMAERAPEPVRRRVPVAPAPMPDVATQNLAQLRSAARDCRRC 293 Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150 L + T+ + +M+IG P D +++SG+PF G G + + L + + R + Sbjct: 294 ELWQPATQTVFGEGPDDASVMVIGEQPGDEEDLSGRPFVGPAGRLFNMALGELGVDRERF 353 Query: 151 HISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 +++ +RN ++ C + + + P ++ +G Sbjct: 354 YVTNAVKHFRFEQRGKRRLHRNPERTHVQACSGWLQAERAQLRPAQIICLGATAAQAVLG 413 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK------KNTWHALITL 254 + + Q G+W L P L TVHP +++ P + L L Sbjct: 414 SSFRLM-QERGQWQRLE---DGTPVLTTVHPSWVLRQPSTDAREEGYRGFVEDLRRL 466 >gi|147669059|ref|YP_001213877.1| phage SPO1 DNA polymerase-related protein [Dehalococcoides sp. BAV1] gi|146270007|gb|ABQ16999.1| phage SPO1 DNA polymerase-related protein [Dehalococcoides sp. BAV1] Length = 206 Score = 144 bits (364), Expect = 9e-33, Method: Composition-based stats. Identities = 43/190 (22%), Positives = 78/190 (41%), Gaps = 6/190 (3%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 K L + + C+L +T ++ +M IG P +++ G+PF G Sbjct: 3 DKEELLKGIYIEIARCVRCNLHTTRTCSVPGEGNADAKIMFIGEAPGFNEDQQGRPFVGA 62 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191 G L +++ SI + R ++I+ + PPGNR+ E+ C + RQIE+I PKI++ Sbjct: 63 AGKFLTELICSIGLTREDVYITNVVKDRPPGNRDPLPDEISACCNFLDRQIEIIKPKIIV 122 Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 +G + +F K I HP + ++K + Sbjct: 123 TLGRFSMARYFTGITIS------KIHGQPMRRDGIIYYPMYHPAAALHQGGLRKEIEQDM 176 Query: 252 ITLKKALKNL 261 + + L+ L Sbjct: 177 LRIPGLLEEL 186 >gi|148242559|ref|YP_001227716.1| Uracil-DNA glycosylase [Synechococcus sp. RCC307] gi|147850869|emb|CAK28363.1| Uracil-DNA glycosylase [Synechococcus sp. RCC307] Length = 194 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 39/192 (20%), Positives = 79/192 (41%), Gaps = 11/192 (5%) Query: 74 ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 + S L + C L +T + + +++IG P ++ G+PF G+ G Sbjct: 2 SSSWPHLSAACHGCERCELATTRHNVVVGRGNPQARVLLIGEAPGQQEDEQGEPFVGRAG 61 Query: 134 NMLDKMLQSIEIM-RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192 +L+K+L + R ++I+ + PP NR + E+E C P + +Q+EL+ P +++ Sbjct: 62 QLLEKLLGEAGLDSRRDLYIANVIKCRPPQNRKPTRTEIERCLPWLYQQLELLDPPLVVL 121 Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNT 247 G + G+W L HP L+++ ++ T Sbjct: 122 AGATALQAVLGIKG-GISKLRGQWIEQQGRAY----LPVFHPSYLLRFGSRAPGAPQELT 176 Query: 248 WHALITLKKALK 259 + +++ L Sbjct: 177 LADMQDVRRRLD 188 >gi|94970381|ref|YP_592429.1| phage SPO1 DNA polymerase-related protein [Candidatus Koribacter versatilis Ellin345] gi|94552431|gb|ABF42355.1| phage SPO1 DNA polymerase-related protein [Candidatus Koribacter versatilis Ellin345] Length = 217 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 43/215 (20%), Positives = 83/215 (38%), Gaps = 17/215 (7%) Query: 58 HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117 + VQ + K SL L + +C L T T+ ++ +G P Sbjct: 2 PMRRKPVQSELPLLMKPRSLEALAHDAKDCRNCDLWKTGTQTVFGEGGAHARVVFVGEQP 61 Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPG----NRNLSNIE 170 D +++ G+PF G GN+L+ L+ I R +++++ W P G ++ + E Sbjct: 62 GDKEDLEGRPFVGPAGNLLNTALEQAGINRNEVYVTNAVKHFKWEPRGKRRLHKKPNAAE 121 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230 + CR + +I I P+I++ +G + + + G + LA Sbjct: 122 VAACRSWMDGEIAAIQPEIIVCLGATAAQAMLG-RSFRVTKQRG---EFLPGPNGASVLA 177 Query: 231 TVHPQELIQYP------LIKKNTWHALITLKKALK 259 TVHP +++ P + L + + Sbjct: 178 TVHPSSILRAPDEDARHEEMRLFVDDLRKVAARMN 212 >gi|75676446|ref|YP_318867.1| phage SPO1 DNA polymerase-related protein [Nitrobacter winogradskyi Nb-255] gi|74421316|gb|ABA05515.1| phage SPO1 DNA polymerase-related protein [Nitrobacter winogradskyi Nb-255] Length = 225 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 43/223 (19%), Positives = 83/223 (37%), Gaps = 17/223 (7%) Query: 50 IQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD 109 I + Q + SL L+ C L + T+ Sbjct: 2 IATEATMPRKPQKREQPMARQSSAHDSLPSLREEAAGCRACPLWKDATQTVFGEGLAHAQ 61 Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG------- 162 +M++G P D ++++GKPF G G MLD+ L+ I RT+++++ Sbjct: 62 VMLVGEQPGDKEDLAGKPFIGPAGQMLDRALKEAGIDRTKVYVTNAVKHFKFVPRGKIRL 121 Query: 163 NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP 222 ++ + E+ CRP R++ ++P +++ +G+ F ++ G+ ++ Sbjct: 122 HQKPNTPEIRACRPWYERELAAVNPALVVAMGSTAAQSVFG-KITPINKSRGRLIDMK-- 178 Query: 223 HSIIPTLATVHPQELIQYPLIKKNTWH------ALITLKKALK 259 L TVHP L++ P L L+ Sbjct: 179 -DGRKALVTVHPSYLLRLPDQDDRAREYKRFVDDLKIAATHLQ 220 >gi|302382564|ref|YP_003818387.1| phage SPO1 DNA polymerase-related protein [Brevundimonas subvibrioides ATCC 15264] gi|302193192|gb|ADL00764.1| phage SPO1 DNA polymerase-related protein [Brevundimonas subvibrioides ATCC 15264] Length = 481 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 84/237 (35%), Gaps = 17/237 (7%) Query: 35 ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94 A+ + + + + Q L EL+ ++ C L Sbjct: 249 ASRDRTETMVDSAPTLPNAKLASAVAPDVRGGGLDDQQIVGDLGELRQAIQGCRRCPLWR 308 Query: 95 TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154 + +C G LMI+G P D ++++G PF G G +LD L+ I R+ ++++ Sbjct: 309 DATQGVCGVGPVGARLMIVGEQPGDQEDLAGLPFVGPAGQVLDAALEEAGIDRSDVYVTN 368 Query: 155 ISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207 ++ + E+ CR + ++ L+ P + L +G N Sbjct: 369 AVKHFKHEPRGKRRLHKTPNAGEVTACRWWLDQERTLVRPSLTLTLGATAAFAVLNQKVA 428 Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH------ALITLKKAL 258 + G+ L + TVHP L++ P + L+ ++ L Sbjct: 429 VM-KTRGEPLPLP---DGSRAMVTVHPSYLLRLPDEEARVRERAAFVRDLVKVRALL 481 >gi|289432328|ref|YP_003462201.1| phage SPO1 DNA polymerase-related protein [Dehalococcoides sp. GT] gi|288946048|gb|ADC73745.1| phage SPO1 DNA polymerase-related protein [Dehalococcoides sp. GT] Length = 206 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 43/190 (22%), Positives = 78/190 (41%), Gaps = 6/190 (3%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 K L + + C+L +T ++ +M IG P +++ G+PF G Sbjct: 3 DKEELLKGIYIEIARCVRCNLHTTRTCSVPGEGNADAKIMFIGEAPGFNEDQQGRPFVGA 62 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191 G L +++ SI + R ++I+ + PPGNR+ E+ C + RQIE+I PKI++ Sbjct: 63 AGKFLTELICSIGLTREDVYITNVVKDRPPGNRDPLPDEISACCNFLDRQIEIIKPKIIV 122 Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 +G + +F K I HP + ++K + Sbjct: 123 TLGRFSMARYFTGITIS------KIHGQPMRRDGIIYYPMYHPAAALHQGGLRKEIEQDM 176 Query: 252 ITLKKALKNL 261 + + L+ L Sbjct: 177 LRIPGLLEEL 186 >gi|116070628|ref|ZP_01467897.1| Phage SPO1 DNA polymerase-related protein [Synechococcus sp. BL107] gi|116066033|gb|EAU71790.1| Phage SPO1 DNA polymerase-related protein [Synechococcus sp. BL107] Length = 187 Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 66/183 (36%), Gaps = 11/183 (6%) Query: 82 SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 C L T + LM+IG P ++ SG PF G++G LD++L Sbjct: 7 DACLRCSACELARTRQQVVVCRGNPSAPLMLIGEAPGAQEDQSGVPFVGRSGQALDRLLI 66 Query: 142 SIEIM-RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF 200 ++I PP NR E+ CRP + +QI ++P +++ G Sbjct: 67 EAGFNIEQDLYICNAVKCRPPNNRRPKKNELAACRPWLDKQIAEVNPAVIVLTGATAVQA 126 Query: 201 FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK-----KNTWHALITLK 255 + G+W + HP L+++ K + T L ++ Sbjct: 127 VL-EKKAAMTELRGQWQTWQ----GRSVMPIFHPAYLLRHASSKEGGPVELTRQDLSAVR 181 Query: 256 KAL 258 L Sbjct: 182 TKL 184 >gi|153005432|ref|YP_001379757.1| phage SPO1 DNA polymerase-like protein [Anaeromyxobacter sp. Fw109-5] gi|152029005|gb|ABS26773.1| phage SPO1 DNA polymerase-related protein [Anaeromyxobacter sp. Fw109-5] Length = 260 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 40/238 (16%), Positives = 88/238 (36%), Gaps = 17/238 (7%) Query: 36 TYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCST 95 + ++ + A A + SL L+ R C L Sbjct: 18 SVPPAPAQRMAERAGGAPRPTAAEPRSRGASAVAPVPADASLASLREAARGCRACPLWER 77 Query: 96 SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMI 155 + T+ +++++G P + ++++G PF G G +LDK L + I R +++++ Sbjct: 78 ATQTVFGEGPSRAEVVLVGEQPGNEEDLAGLPFVGPAGRLLDKALAAAGIDRRRVYVTNA 137 Query: 156 SPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQK 208 ++ + E+ CRP + ++ L+ P+ ++ +G + Sbjct: 138 VKHFKWEPRGKRRIHQKPNAGEVRACRPWLDAELRLVRPRAVVCLGATAAQALLG-KGFR 196 Query: 209 TYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT------WHALITLKKALKN 260 ++ G LATVHP +++ P + L + +AL++ Sbjct: 197 VTRSRG---EPLASPLAPIVLATVHPSAILRAPDDETRAAELSRFVEDLRRVAEALRS 251 >gi|188993245|ref|YP_001905255.1| Uracil DNA glycosylase superfamily protein,probable [Xanthomonas campestris pv. campestris str. B100] gi|167735005|emb|CAP53217.1| Uracil DNA glycosylase superfamily protein,probable [Xanthomonas campestris pv. campestris] Length = 472 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 45/234 (19%), Positives = 82/234 (35%), Gaps = 17/234 (7%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P E R+ + A A A SL +L+ R C Sbjct: 234 PEATLLPELIREAGVRVREMAERAPEPVRRRVPATPAALPAVAAQSLAQLRVAARDCRRC 293 Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150 L + T+ + +M+IG P D +++SG+PF G G + ++ L + I R + Sbjct: 294 DLWQPATQTVFGEGPDDAAVMVIGEQPGDEEDLSGRPFVGPAGRLFNQALGELGIDRQRF 353 Query: 151 HISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 +++ +RN ++ C + + + P ++ +G Sbjct: 354 YVTNAVKHFRFEQRGKRRLHRNPERSHVQACNGWLQAERAQLRPAQIVCLGATAAQAVLG 413 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY--PLIK----KNTWHAL 251 + Q G+W L P LATVHP +++ P + + L Sbjct: 414 P-GFRLMQERGQWQRL---DDGTPVLATVHPSWVLRQGTPSAREAGYRGFVADL 463 >gi|284044347|ref|YP_003394687.1| phage SPO1 DNA polymerase-related protein [Conexibacter woesei DSM 14684] gi|283948568|gb|ADB51312.1| phage SPO1 DNA polymerase-related protein [Conexibacter woesei DSM 14684] Length = 254 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 47/191 (24%), Positives = 80/191 (41%), Gaps = 1/191 (0%) Query: 69 SIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128 + A++ L E+ + C L T + + DLM +G P +++ G PF Sbjct: 3 TAAERRERLKEVWREASTCTLCALSETRQTVVFGAGNADADLMFVGEAPGANEDRGGLPF 62 Query: 129 SGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188 G+ G +LDK+LQ + + R + I+ + PPGNR+ E+ CR + RQ+ELI PK Sbjct: 63 IGQAGRLLDKLLQEVGLERADVFIANVLKCRPPGNRDPRPTEIATCRDYLHRQVELIEPK 122 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW 248 ++ +GN + +D + G+ + HP + P + Sbjct: 123 VICTLGNFSTK-LLRDDPTGISRVHGQPEVHVLGRRAVRIFPIFHPAAALYTPSMLDTLR 181 Query: 249 HALITLKKALK 259 L L Sbjct: 182 ADFAQLPGLLA 192 >gi|320355015|ref|YP_004196354.1| Uracil-DNA glycosylase superfamily [Desulfobulbus propionicus DSM 2032] gi|320123517|gb|ADW19063.1| Uracil-DNA glycosylase superfamily [Desulfobulbus propionicus DSM 2032] Length = 315 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 92/269 (34%), Gaps = 21/269 (7%) Query: 8 SQEQILTI-------ALFYADSGVYWVFDEP-------NNEATYESQRKEKSIDSAIQPI 53 + +L + + G+ P +A Q+K + Sbjct: 38 DRAALLALGEGVRTLLRLHQQMGISHYPLTPGLGTFVRAKQARPNEQKKRMRPPAPTAAP 97 Query: 54 TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113 + + ++ L L+ + C L + + A T L++I Sbjct: 98 VGKKTAPAATATAGQPPPTESDRLSVLRRDIEVCRLCPLAADRWGVVFAAGTAPARLLVI 157 Query: 114 GYTPSDSDNISGKP-FSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEME 172 G S F G+ ML M+++I + I ++ +L + Sbjct: 158 GGHSRQEGEYSPTILFGGQEDVMLWNMMRAIGLGSGDIVVTNAIKC--CPKADLPPESLH 215 Query: 173 ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS---IIPTL 229 C + R+I L+ P+++L +G + + + + G++ + IP + Sbjct: 216 ACTVHLRREIALVQPRVILAMGEEAAHAVLG-TGEPISRLRGRFHAARQDDANGVPIPVM 274 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKAL 258 T HP+ L+ P +K+ W L +++ L Sbjct: 275 VTFHPRFLLAQPAMKQAAWQDLQMIQRRL 303 >gi|33240466|ref|NP_875408.1| Uracil-DNA glycosylase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237994|gb|AAQ00061.1| Uracil-DNA glycosylase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 202 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 75/181 (41%), Gaps = 11/181 (6%) Query: 87 FHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI- 145 H C L + + + +LM+IG P ++ +G PF G++G +L+ +L++ Sbjct: 12 CHSCGLDKDTCRIVVSRGDPTSNLMLIGEAPGAKEDETGIPFVGRSGKLLNILLENEGFD 71 Query: 146 MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 + I + PP NR + E++ P + +QI+L+ P I++ IG+ Sbjct: 72 YEKDVFICNLLKSRPPNNRTPTRQEIQNHIPWLYQQIKLVDPLIIVLIGSSALRAILGIK 131 Query: 206 AQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK-----KNTWHALITLKKALKN 260 + K G W N I + HP L++ P T L + + L Sbjct: 132 S-KISDLRGTWHNWN----GIYAMPIFHPSYLLRNPSKTIGGPYNLTCLDLREVNRKLVE 186 Query: 261 L 261 L Sbjct: 187 L 187 >gi|307321350|ref|ZP_07600749.1| phage SPO1 DNA polymerase-related protein [Sinorhizobium meliloti AK83] gi|306892995|gb|EFN23782.1| phage SPO1 DNA polymerase-related protein [Sinorhizobium meliloti AK83] Length = 213 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 75/200 (37%), Gaps = 17/200 (8%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 +A ++ L+ C L + + ++ +G P D ++++G+PF G Sbjct: 17 AEATTIASLRRQAEGCERCDLYKNATQLVFGEGPVDARVVFVGEQPGDREDLAGRPFVGP 76 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIEL 184 G +LD+ L I R++ +++ + + E++ C + +++ Sbjct: 77 AGRILDECLHEAGIDRSECYLTNAVKHFKFEQRGKRRMHSRPNAGEIQACAWWLGAELDE 136 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ----- 239 + P+I++ +G + +N G+ L T+HP L++ Sbjct: 137 LRPEIVVALGATALMSLLG-RSVGVTRNRGQLLTAP---GGFSVLVTIHPSYLLRIRGRS 192 Query: 240 YPLIKK-NTWHALITLKKAL 258 P ++ L + + Sbjct: 193 DPEAERARFVDDLAKVATRI 212 >gi|269216098|ref|ZP_06159952.1| uracil-DNA glycosylase, family 4 [Slackia exigua ATCC 700122] gi|269130357|gb|EEZ61435.1| uracil-DNA glycosylase, family 4 [Slackia exigua ATCC 700122] Length = 211 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 70/184 (38%), Gaps = 5/184 (2%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L E+ + + C L + + +M++G P ++++ GKPF G G L Sbjct: 23 LEEISDAVWACRRCELAEGRTNAVPGFGNASARIMLVGEAPGRNEDLQGKPFVGAAGKYL 82 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++L + R ++ I+ + PP NRN E+E+C P + Q+ I P+ L+ +GN Sbjct: 83 TELLGYAGLTREEVFIANVLKCRPPSNRNPRPEEIEVCTPFLRDQVRTIEPEYLVTMGNF 142 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 + F + G HP I + L + Sbjct: 143 STKFVL-RTERGITGLRGSVHVT----GPFKVFPVFHPAAAIYDRSKRDVLEADFRALGR 197 Query: 257 ALKN 260 L N Sbjct: 198 LLGN 201 >gi|72381948|ref|YP_291303.1| phage SPO1 DNA polymerase-related protein [Prochlorococcus marinus str. NATL2A] gi|72001798|gb|AAZ57600.1| phage SPO1 DNA polymerase-related protein [Prochlorococcus marinus str. NATL2A] Length = 187 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 77/177 (43%), Gaps = 11/177 (6%) Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM-RTQ 149 L ++ + + LMIIG P + G+PF G++G +LDK+LQ+ I Sbjct: 16 DLDNSINKIVVSRGNPFAKLMIIGEAPGAKEEEIGEPFVGRSGKLLDKLLQNAGIDINQD 75 Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209 ++ + PP NR + IE++ P + +QI+L++P +++ +G + Sbjct: 76 VYFCNVIKCRPPKNRRPTKIEIQENLPWLYQQIKLVNPSVIVLVGATALEAILKIKS-PI 134 Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK-----NTWHALITLKKALKNL 261 G+W + + HP L++ P ++ T + +K+ + L Sbjct: 135 SILRGEWIDWEGK----LVMPVFHPSYLLRNPSKEEGKPMSLTKSDFLKIKEKIDFL 187 >gi|51245612|ref|YP_065496.1| DNA polymerase [Desulfotalea psychrophila LSv54] gi|50876649|emb|CAG36489.1| related to DNA polymerase, bacteriophage-type [Desulfotalea psychrophila LSv54] Length = 269 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 43/264 (16%), Positives = 100/264 (37%), Gaps = 9/264 (3%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEP--NNEATYESQRKEKSIDSAIQPITNIRH 58 M+ K I++ + + ++ G+ D + Y+++ Q ++ Sbjct: 1 MSKKEIIT--DLYNLLQYHEILGIKEYPDREGLQDFLAYQAEAPATIPSPPPQAVSRPPK 58 Query: 59 IH--SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY- 115 P+ A + + A + E L + +C L + + + + L+++G Sbjct: 59 AREYRPVTPIATVVKEPAPTKTEGTDLKKLCANCGLQTRQQAFVAGKGGKQVRLLVVGGW 118 Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICR 175 ++ + F + ML +M ++++ + ++ + +++ C Sbjct: 119 RIDGNETLRSAVFGAEEDLMLARMFAAMKLPAANVFVTNLVKCALRVGDRPEAADIDSCL 178 Query: 176 PIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT-PHSIIPTLATVHP 234 ++ RQIEL+ P+++ +G GK+ + IP LAT HP Sbjct: 179 RLLHRQIELLQPEMVCVMGTLAARKVLG-KPHSLSHLRGKFYQIELLKGQTIPVLATYHP 237 Query: 235 QELIQYPLIKKNTWHALITLKKAL 258 L++ +K+ TW L + L Sbjct: 238 SYLLKNDEMKRPTWEDLQKVATRL 261 >gi|23011683|ref|ZP_00051971.1| COG1573: Uracil-DNA glycosylase [Magnetospirillum magnetotacticum MS-1] Length = 152 Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 55/151 (36%), Positives = 80/151 (52%), Gaps = 2/151 (1%) Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170 M +G P ++ GKPF G++G +LD+M+ +I + RT ++S I PW PPGNRN + E Sbjct: 1 MFVGEAPGADEDRIGKPFMGRSGQLLDRMMAAIGLDRTTSYVSNIVPWRPPGNRNPTPQE 60 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP-HSIIPTL 229 + ICRP I RQIEL +P IL+ +G + G++ I L Sbjct: 61 VSICRPFIERQIELANPDILVCLGAPATQTLTGTK-DGILKARGRFYPYRLGDGREIRAL 119 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 AT+HP L++ P+ K+ W LK AL Sbjct: 120 ATLHPAYLLRQPVQKRLAWRDFRMLKAALDA 150 >gi|78184753|ref|YP_377188.1| Phage SPO1 DNA polymerase-related protein [Synechococcus sp. CC9902] gi|78169047|gb|ABB26144.1| Phage SPO1 DNA polymerase-related protein [Synechococcus sp. CC9902] Length = 187 Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 67/183 (36%), Gaps = 11/183 (6%) Query: 82 SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 C L +T + LM+IG P ++ +G PF G++G LD++L Sbjct: 7 DACLRCSACELATTRQKVVVYRGNPKAPLMLIGEAPGAQEDQTGLPFKGRSGQALDRLLI 66 Query: 142 SIEIM-RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF 200 ++I PP NR E+ CRP + +QI ++P +++ G Sbjct: 67 EAGFNIEKDLYICNAVKCRPPNNRRPKKTELTACRPWLDKQIAEVNPAVIVLTGATAVQA 126 Query: 201 FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK-----KNTWHALITLK 255 + GKW + HP L+++ K + T L ++ Sbjct: 127 LLELKT-AMTELRGKWQTWQ----GRSVMPIFHPAYLLRHASAKEGGPVELTRQDLSAVR 181 Query: 256 KAL 258 L Sbjct: 182 TKL 184 >gi|124025440|ref|YP_001014556.1| Uracil-DNA glycosylase [Prochlorococcus marinus str. NATL1A] gi|123960508|gb|ABM75291.1| Uracil-DNA glycosylase [Prochlorococcus marinus str. NATL1A] Length = 187 Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 77/177 (43%), Gaps = 11/177 (6%) Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM-RTQ 149 L ++ + + LMIIG P + G+PF G++G +LDK+LQ+ I Sbjct: 16 DLDNSINKIVVSRGNPFAKLMIIGEAPGAKEEEIGEPFVGRSGKLLDKLLQNAGIDINQD 75 Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209 ++ + PP NR + IE++ P + +QI+L++P +++ +G + Sbjct: 76 VYFCNVVKCRPPKNRRPTKIEIQENLPWLYQQIKLVNPSVIVLVGATALEAILKIKS-PI 134 Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK-----NTWHALITLKKALKNL 261 G+W + + HP L++ P ++ T + +K+ + L Sbjct: 135 SILRGEWIDWEGK----LVMPVFHPSYLLRNPSKEEGKPMSLTKSDFLKIKEKIDFL 187 >gi|299134859|ref|ZP_07028051.1| phage SPO1 DNA polymerase-related protein [Afipia sp. 1NLS2] gi|298590669|gb|EFI50872.1| phage SPO1 DNA polymerase-related protein [Afipia sp. 1NLS2] Length = 217 Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 76/197 (38%), Gaps = 17/197 (8%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 SL +L+ CHL + T+ +M++G P D ++++GKPF G G Sbjct: 18 ESLADLREEAAHCRACHLYKDATQTVFGEGAAHAPIMLVGEQPGDKEDLAGKPFVGPAGQ 77 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISP 187 +L + L +I R +++I+ ++ + E+ CR R++ + P Sbjct: 78 VLARGLDEAKIPRNKVYITNAVKHFKFVLRGKVRLHQKPNTSEIRACRQWYERELLAVKP 137 Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247 +++ +G F +N G + +L L TVHP L++ P Sbjct: 138 ALVVAMGATAAQCVFG-KITPIGKNRGHFLDLTED---TKALVTVHPSYLLRLPDADAKA 193 Query: 248 WH------ALITLKKAL 258 L + + Sbjct: 194 REYAHFVSDLKLAFEYI 210 >gi|294010642|ref|YP_003544102.1| DNA polymerase bacteriophage-type [Sphingobium japonicum UT26S] gi|292673972|dbj|BAI95490.1| DNA polymerase bacteriophage-type [Sphingobium japonicum UT26S] Length = 464 Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 80/233 (34%), Gaps = 11/233 (4%) Query: 24 VYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSL 83 V + E + + + + + + + A + L+ Sbjct: 217 VGAMLSEMPRKYWRNLPEAALIPELVAGAQSREAAMIATPPKPSARQGNAAAAWSALREE 276 Query: 84 LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143 C L + T+ LM IG P D ++++G+PF G G + D L+ Sbjct: 277 AMGCTRCPLYRDTTQTVFGEGPVDAPLMFIGEQPGDQEDLAGRPFVGPAGQLFDYALEEA 336 Query: 144 EIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 I R + +I+ ++ E++ CR + +++EL+ P+I++ +G Sbjct: 337 GIDRRRAYITNAVKHFKHERRGKRRIHQTPETPEIQACRWWLTQELELVRPRIIVALGAT 396 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249 A + G L + TVHP L++ P + Sbjct: 397 AGRALLG-KAVTISRVRGAPIALESGAQG---WITVHPSYLLRVPDEARKMEE 445 >gi|82702415|ref|YP_411981.1| phage SPO1 DNA polymerase-related protein [Nitrosospira multiformis ATCC 25196] gi|82410480|gb|ABB74589.1| phage SPO1 DNA polymerase-related protein [Nitrosospira multiformis ATCC 25196] Length = 209 Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 84/212 (39%), Gaps = 16/212 (7%) Query: 60 HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSD 119 PL + ++ L+ + CHL + T+ +M++G P D Sbjct: 2 KMPLPDTSHPAEHAGNTVASLRKAATNCRACHLWEHATQTVFGEGPSHASIMLVGEQPGD 61 Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEME 172 ++ +G PF G G++L L ++ I R +++++ ++ + E+ Sbjct: 62 REDATGHPFVGPAGSILSHALTAVGISREEVYVTNAVKHFKFELRGKRRMHKKPIDTEIV 121 Query: 173 ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATV 232 C + R+IELI+P++++ +G A N GK + + L TV Sbjct: 122 ACHAWLQREIELITPRLIIALGATAARSLLG-RATPVKVNRGKLLEYA---TGVSLLITV 177 Query: 233 HPQELIQYPLIKKN-----TWHALITLKKALK 259 HP L++ P K+ + L K L Sbjct: 178 HPSFLLRMPEENKDEEYEHFVNDLNLAKPFLD 209 >gi|325915940|ref|ZP_08178236.1| uracil-DNA glycosylase, family 4 [Xanthomonas vesicatoria ATCC 35937] gi|325537907|gb|EGD09607.1| uracil-DNA glycosylase, family 4 [Xanthomonas vesicatoria ATCC 35937] Length = 479 Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 83/242 (34%), Gaps = 25/242 (10%) Query: 26 WVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLR 85 + E EA + + ++ + +P V SL +L++ R Sbjct: 237 ALLPELIREAGVRVREMAERAPEPVRRRVPMTPAPTPDVAT--------QSLAQLRTAAR 288 Query: 86 SFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI 145 C L + T+ + +M+IG P D +++SG+PF G G + L + + Sbjct: 289 DCRRCELWQPATQTVFGEGPDDASVMVIGEQPGDEEDLSGRPFVGPAGRLFTMALGELGV 348 Query: 146 MRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTK 198 R +++ +RN ++ C + + + P ++ +G Sbjct: 349 DRQAFYVTNAVKHFRFEQRGKRRLHRNPERAHVQACSGWLQAERAQLRPAQIVCLGATAA 408 Query: 199 NFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI------KKNTWHALI 252 + Q G+W L P LATVHP +++ + L Sbjct: 409 QAVLG-SGFRLMQQRGQWQRL---DDGTPVLATVHPSWVLRQGSEVAREEGYRGFVQDLR 464 Query: 253 TL 254 L Sbjct: 465 QL 466 >gi|21244429|ref|NP_644011.1| DNA polymerase-like protein [Xanthomonas axonopodis pv. citri str. 306] gi|21110092|gb|AAM38547.1| DNA polymerase related protein [Xanthomonas axonopodis pv. citri str. 306] Length = 478 Score = 141 bits (356), Expect = 7e-32, Method: Composition-based stats. Identities = 42/237 (17%), Positives = 79/237 (33%), Gaps = 17/237 (7%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P E R + A SL +L++ R C Sbjct: 234 PEATLLPELIRDAGMRVREMAERAPEPVRRRVPAAPAPLPEAATQSLAQLRTAARDCRRC 293 Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150 L + T+ ++ +M+IG P D +++SG+PF G G + + L + + R Sbjct: 294 ELWQPATQTVFGEGSDDASVMVIGEQPGDEEDLSGRPFVGPAGRLFNMALGELGVDRETF 353 Query: 151 HISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 +++ +RN ++ C + + + P ++ +G Sbjct: 354 YVTNAVKHFRFEQRGKRRLHRNPERTHVQACSGWLQAERAHLRPAQIVCLGATAAQAVLG 413 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK------KNTWHALITL 254 + + Q G+W L P L TVHP +++ P + L L Sbjct: 414 SRFRLMQQ-RGQWQRL---DDGTPVLTTVHPSWVLRQPSTDAREEGYRGFVEDLRQL 466 >gi|16265025|ref|NP_437817.1| putative DNA polymerase related protein [Sinorhizobium meliloti 1021] gi|15141164|emb|CAC49677.1| putative DNA polymerase related protein [Sinorhizobium meliloti 1021] Length = 213 Score = 141 bits (356), Expect = 8e-32, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 76/200 (38%), Gaps = 17/200 (8%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 +A ++ L+ C L + + ++++G P D ++++G+PF G Sbjct: 17 AEATTIASLRRQAEGCERCDLYKNATQLVFGEGPVDARVVLVGEQPGDREDLAGRPFVGP 76 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIEL 184 G +LD+ L I R++ +++ + + E++ C + +++ Sbjct: 77 AGRILDECLHEAGIDRSECYLTNAVKHFKFEQRGKRRMHSRPNAGEIQACAWWLGAELDE 136 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ----- 239 + P+I++ +G + +N G+ L T+HP L++ Sbjct: 137 LRPEIVVALGATALMSLLG-RSVGVTRNRGQLLTAP---GGFSVLVTIHPSYLLRIRGRS 192 Query: 240 YPLIKK-NTWHALITLKKAL 258 P ++ L + + Sbjct: 193 DPEAERARFVDDLAKVATRI 212 >gi|150376548|ref|YP_001313144.1| phage SPO1 DNA polymerase-like protein [Sinorhizobium medicae WSM419] gi|150031095|gb|ABR63211.1| phage SPO1 DNA polymerase-related protein [Sinorhizobium medicae WSM419] Length = 213 Score = 141 bits (355), Expect = 9e-32, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 75/200 (37%), Gaps = 17/200 (8%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 +A ++ L+ C L + + ++++G P D ++++G+PF G Sbjct: 17 AEAPTIASLRREAEGCERCDLYKNATQLVFGEGPTDARVVLVGEQPGDREDLAGRPFVGP 76 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIEL 184 G +LD+ + I R++ +++ + + E++ C + +I+ Sbjct: 77 AGRLLDECMHEAGIDRSECYLTNAVKHFKFEPRGKRRLHSRPNAGEVQACAWWLGAEIDE 136 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ----- 239 + P+I++ +G +N G+ L T+HP L++ Sbjct: 137 LRPEIVVALGATALMSLLG-RGVGVTKNRGQ---FVPAPGGFSVLVTIHPSYLLRIRGRG 192 Query: 240 YPLIKK-NTWHALITLKKAL 258 P ++ L + + Sbjct: 193 DPEAERARFVDDLAKVAVRI 212 >gi|260463163|ref|ZP_05811365.1| phage SPO1 DNA polymerase-related protein [Mesorhizobium opportunistum WSM2075] gi|259031013|gb|EEW32287.1| phage SPO1 DNA polymerase-related protein [Mesorhizobium opportunistum WSM2075] Length = 226 Score = 141 bits (355), Expect = 9e-32, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 86/224 (38%), Gaps = 19/224 (8%) Query: 52 PITNIRHIHSPLVQQADSIAQK--ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD 109 P V +A+ I+ + A S+ EL+ C L + T+ + Sbjct: 7 PRNAKMPARRVSVPRAELISDETDANSIPELRDAAEGCRRCPLWRNATQTVFGEGPDNAK 66 Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG------- 162 ++ +G P D ++++GKPF G G + D +L ++ R +++++ Sbjct: 67 VIFVGEQPGDQEDLAGKPFVGPAGRVFDAILVDADVDRQKVYVTNAVKHFKFEPRGKRRI 126 Query: 163 NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP 222 + + E++ CR + ++ +LI P + + +G A + G+ Sbjct: 127 HSKPNAGEVQACRWWLDQEFDLIKPNLAVALGATAALSLLG-KATPVMKMRGQVIE---R 182 Query: 223 HSIIPTLATVHPQELI--QYPLIK----KNTWHALITLKKALKN 260 + T+HP ++ + P K + + +K+ + Sbjct: 183 EDGLRVFITIHPSFILRIREPADKEAERERFLKDMREVKRLMAA 226 >gi|292492113|ref|YP_003527552.1| phage SPO1 DNA polymerase-related protein [Nitrosococcus halophilus Nc4] gi|291580708|gb|ADE15165.1| phage SPO1 DNA polymerase-related protein [Nitrosococcus halophilus Nc4] Length = 194 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 56/193 (29%), Positives = 91/193 (47%), Gaps = 6/193 (3%) Query: 68 DSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127 D +K +L+ELK L + + + + ++MIIG P + +G+P Sbjct: 6 DEQLEKVATLNELKQLCEHYLGSEVSKGEK-FVFGEGSPQAEVMIIGEAPGVQEAKTGRP 64 Query: 128 FSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP 187 F G G +L+ +L I + R QI+IS I HP GNR E++ P ++RQIEL+ P Sbjct: 65 FVGNAGKLLNTLLNQIGLEREQIYISNILKTHPSGNRKPYRGEIKKELPFLLRQIELLRP 124 Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247 K+L+ +G ++ A K + G W + +PT T HP ++ KK Sbjct: 125 KLLVLLGATALQALYDPKA-KITELRGNWIEV----KNLPTFVTYHPAAALRDETKKKTL 179 Query: 248 WHALITLKKALKN 260 H L++ L + Sbjct: 180 EHDFSKLQERLAS 192 >gi|325293540|ref|YP_004279404.1| DNA polymerase bacteriophage-type [Agrobacterium sp. H13-3] gi|325061393|gb|ADY65084.1| putative DNA polymerase bacteriophage-type [Agrobacterium sp. H13-3] Length = 481 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 44/231 (19%), Positives = 91/231 (39%), Gaps = 14/231 (6%) Query: 37 YESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTS 96 E++ E + +A QP + + + + +L L C L + Sbjct: 252 AEARVLEMAAKAASQPQPFHHRLQAAASAREEPPPAPDGTLASLAQEAGQCTRCALHCKA 311 Query: 97 LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156 T+ E +MI+G P D ++++GKPF G G + D+ L I R +++++ Sbjct: 312 TQTVFGMGPEDAKVMIVGEQPGDHEDLAGKPFVGPAGQLFDRTLVEAGIDRKKLYVTNAV 371 Query: 157 PWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209 ++ E++ CR + ++IEL+ PK+++ +G +K Sbjct: 372 KHFKYEARGKRRIHQRPDAGEVQQCRWWLNKEIELVRPKLIVAMGATALYALTGGK-EKV 430 Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQYP-LIKKNTWHALITLKKALK 259 + G+ + + TVHP L++ P +K + + + Sbjct: 431 SEVRGRPIPMQEERT---LFVTVHPSYLLRLPDSQQKEAE--MQNFRNEID 476 >gi|295695673|ref|YP_003588911.1| phage SPO1 DNA polymerase-related protein [Bacillus tusciae DSM 2912] gi|295411275|gb|ADG05767.1| phage SPO1 DNA polymerase-related protein [Bacillus tusciae DSM 2912] Length = 193 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 77/182 (42%), Gaps = 5/182 (2%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 +L++L+S +S C L + + T G ++++G P ++ G PF G+ G Sbjct: 5 QNLNQLESAFKSCRRCGLRGGCSQVVVSRGTPG-PVVLVGEAPGADEDAQGFPFVGRAGQ 63 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 +LD+ML+ +++I+ PPGNR + EM CRP +M Q ++ P+I++ +G Sbjct: 64 LLDRMLKEAGFDPARLYITNAVKCRPPGNRKPAPEEMVACRPYLMAQFAVLQPEIVVTMG 123 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT---WHAL 251 + ++ + HP +++ P + W + Sbjct: 124 ATAIQAVLGRT-IPVGRASTRFYHARHREREFLVAPCYHPSAILRDPRKYPDAVARWVDI 182 Query: 252 IT 253 Sbjct: 183 RK 184 >gi|329114631|ref|ZP_08243390.1| Phage SPO1 DNA Polymerase-Related Protein [Acetobacter pomorum DM001] gi|326696111|gb|EGE47793.1| Phage SPO1 DNA Polymerase-Related Protein [Acetobacter pomorum DM001] Length = 420 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 42/200 (21%), Positives = 74/200 (37%), Gaps = 17/200 (8%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 +A SL L + C L + T+ E LM +G P D ++++G+PF G Sbjct: 220 AQAASLASLSAEAMDCRACSLWQPAKRTVFGEGVENTPLMFVGEQPGDQEDLAGRPFVGP 279 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISP-----WH--PPGNRNLSNIEMEICRPIIMRQIEL 184 G + DK L+ I+R I+++ W ++ +E CR + + L Sbjct: 280 AGQVFDKALEEAGILRNHIYVTNAVKHFRFTWRNTRRLHQKPDQESVEACRIWLDAERRL 339 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK 244 + PK+++ +G + + L S L TVHP L++ P + Sbjct: 340 VQPKLIVMLGVTAAQSLLK-RPVTISRERSRIFQLNEQCSG---LVTVHPSYLLRLPNEE 395 Query: 245 KNTW------HALITLKKAL 258 L + Sbjct: 396 AKAREYARFVEDLRLAHSFI 415 >gi|329889045|ref|ZP_08267388.1| uracil-DNA glycosylase, family 4 family protein [Brevundimonas diminuta ATCC 11568] gi|328844346|gb|EGF93910.1| uracil-DNA glycosylase, family 4 family protein [Brevundimonas diminuta ATCC 11568] Length = 475 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 87/235 (37%), Gaps = 17/235 (7%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P A + + SA +P + + +P V +A + L EL ++ C Sbjct: 239 PELTAAASVRTEAMVTQSAPKPNERFQRVRAPSVDRAPTDDLVPGDLDELARGVQGCRRC 298 Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150 L + +C + LM++G P D +++ G+PF+G G +LD + + R + Sbjct: 299 PLWRDATQGVCGEGPKRAALMVVGEQPGDQEDLVGRPFTGPAGRLLDAAFEEAGLHRRDL 358 Query: 151 HISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 +++ +R S E++ CR + + L+ P+++L +G Sbjct: 359 YLTNAVKHFKHEPRGKRRLHRTPSPSEVQACRWWLDHERRLVKPRLILALGATAGLAVLG 418 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP------LIKKNTWHALI 252 + G+ T TVHP L++ P + L Sbjct: 419 RKPAVQAE-RGRV---ITADDGARVFLTVHPAYLLRLPVPAARDSERAKFLADLR 469 >gi|171910613|ref|ZP_02926083.1| phage SPO1 DNA polymerase-related protein [Verrucomicrobium spinosum DSM 4136] Length = 476 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 88/245 (35%), Gaps = 22/245 (8%) Query: 34 EATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKA-----CSLHELKSLLRSFH 88 ++ P + S +Q A A L L+ + Sbjct: 235 WRNLPEAAIIPTLLEQASPRVEVMMERSHALQSQLKEAHPADVPNTNDLEVLRDAAATCK 294 Query: 89 DCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRT 148 C L + T+ +++ +G P D ++++GKPF G G +LD+ LQ I R Sbjct: 295 ACPLYKDATQTVFGEGHVSAEIVFLGEQPGDQEDLAGKPFVGPAGRLLDQALQEAGIDRE 354 Query: 149 QIHISMIS---PWHPPG----NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 +++ W G ++ E+ C+P ++ +I P+IL+ +G Sbjct: 355 TCYVTNAVKHFKWKRQGKRRLHQTPVQAEIHACKPWWRAELAIIKPRILVCLGATAARTV 414 Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH------ALITLK 255 A K G++ TL TVHP L++ P + L + Sbjct: 415 L-EHAVKIGDVRGEFMETTWCE---KTLVTVHPSSLLRQPDPEIRAEEMARFVADLKLVA 470 Query: 256 KALKN 260 +AL + Sbjct: 471 RALAS 475 >gi|330507398|ref|YP_004383826.1| uracil DNA glycosylase [Methanosaeta concilii GP-6] gi|328928206|gb|AEB68008.1| uracil DNA glycosylase [Methanosaeta concilii GP-6] Length = 192 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 40/188 (21%), Positives = 78/188 (41%), Gaps = 11/188 (5%) Query: 74 ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 L L+ + S C L + T+ + ++M++G P +++ G PF G+ G Sbjct: 7 PPDLILLQEKIASCDLCPLSLSRNLTVPGSGPSKAEIMLVGEAPGREEDLKGLPFVGRAG 66 Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 +LD+ L + R + I+ + PP NR + E+E+C P + Q++ I P+I+ + Sbjct: 67 RLLDEALNEAGLKREDVFITSVIKCRPPQNRKPNKKEIELCLPYLEDQMDAIRPRIICLM 126 Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253 GN G+ + L T HP +++ + + L Sbjct: 127 GNTAIQA--VLGVVGVTVLRGRILSD-------RFLVTYHPAAVLRNRNLMADFVSDLRE 177 Query: 254 LKKALKNL 261 +++L Sbjct: 178 --AKIQSL 183 >gi|190572663|ref|YP_001970508.1| putative uracil DNA glycosylase [Stenotrophomonas maltophilia K279a] gi|190010585|emb|CAQ44194.1| putative uracil DNA glycosylase [Stenotrophomonas maltophilia K279a] Length = 486 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 85/218 (38%), Gaps = 17/218 (7%) Query: 53 ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMI 112 P+ A + SL L+ + C L T+ T+ +M+ Sbjct: 268 PAQAPQRRIPMRGDAAAARPDTASLQTLRQQASACRQCPLWETATQTVFGQGPADARVMV 327 Query: 113 IGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRN 165 IG P D++++ G+PF+G G +LD+ L + I R ++++ ++ Sbjct: 328 IGEQPGDTEDLRGQPFAGPAGQLLDRALAELGIDRATLYLTNAVKHFHHERRGKVRLHKR 387 Query: 166 LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI 225 + ++ CRP +M +I + P++++ +G F D ++ G+W L Sbjct: 388 PESRHIQACRPWLMGEIARVRPQLIVCLGATAAASVFGRDFNL-SRDRGRWHTLEEGTRG 446 Query: 226 IPTLATVHPQELIQYPLIKK------NTWHALITLKKA 257 ATVHP +++ + L L + Sbjct: 447 Y---ATVHPAWVLRQGDGARRERAYALFRDDLAQLLQK 481 >gi|332703223|ref|ZP_08423311.1| phage SPO1 DNA polymerase-related protein [Desulfovibrio africanus str. Walvis Bay] gi|332553372|gb|EGJ50416.1| phage SPO1 DNA polymerase-related protein [Desulfovibrio africanus str. Walvis Bay] Length = 189 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 6/187 (3%) Query: 74 ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 + L EL +R C L + +++G P ++ G+PF G+TG Sbjct: 7 SARLDELAEGIRICERCPLHLGRRHAVPGEGGFRLHCLLVGEAPGQREDEVGRPFIGRTG 66 Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP-IIMRQIELISPKILLF 192 LD+ L + R I+ PPGNR +EM+ICR ++ QI+ + P++++ Sbjct: 67 AFLDRFLVPFGLSRDDFFITSSVKCRPPGNRAPKPLEMDICREAWLLPQIQALKPRLVVL 126 Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 +GN + GK HS + L T HP +++P +++ Sbjct: 127 MGNAPIRSLLGVRT-PMNELHGKLR----QHSGLSMLPTYHPTAAMRFPAVRRLAEADWE 181 Query: 253 TLKKALK 259 T++ L+ Sbjct: 182 TIRTLLR 188 >gi|94265274|ref|ZP_01289033.1| Phage SPO1 DNA polymerase-related protein [delta proteobacterium MLMS-1] gi|93454255|gb|EAT04571.1| Phage SPO1 DNA polymerase-related protein [delta proteobacterium MLMS-1] Length = 276 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 54/248 (21%), Positives = 96/248 (38%), Gaps = 14/248 (5%) Query: 19 YADSGVYWVFDEPNNEATYE-------SQRKEKSIDSAIQPITNIRHIHSPLVQQADSIA 71 + + GV T + ++K +A R + Q + Sbjct: 33 HQELGVDAYPPSARPLLTATGPGENHRAAAEQKGHQAASATPPPERAEQAGPAQAPAAAR 92 Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 Q L + +R+ + C L I L+I+ P ++ +G P G+ Sbjct: 93 QPRPELAAVAGRIRACNRCPL--QRPRIIVGQGNPEARLLIVAPPPGPAEEAAGLPCQGE 150 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191 G +LDKML +I + R+ ++++ + PP R + E CRP ++ QI I P +L Sbjct: 151 AGALLDKMLAAIGLARSTVYLTTVVKCDPPDCRPPTPEESRQCRPWLLEQIAAIRPTLLC 210 Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 +G + + Q G++ + I + T+ P L+ P +KK WH L Sbjct: 211 TMGQEAAQSLLKSSRNL-LQLRGRFHD----CQGIALMPTLAPDFLLPNPEMKKAAWHDL 265 Query: 252 ITLKKALK 259 + K L Sbjct: 266 QLIAKRLA 273 >gi|258542770|ref|YP_003188203.1| phage SPO1 DNA polymerase-related protein [Acetobacter pasteurianus IFO 3283-01] gi|256633848|dbj|BAH99823.1| phage SPO1 DNA polymerase-related protein [Acetobacter pasteurianus IFO 3283-01] gi|256636907|dbj|BAI02876.1| phage SPO1 DNA polymerase-related protein [Acetobacter pasteurianus IFO 3283-03] gi|256639960|dbj|BAI05922.1| phage SPO1 DNA polymerase-related protein [Acetobacter pasteurianus IFO 3283-07] gi|256643016|dbj|BAI08971.1| phage SPO1 DNA polymerase-related protein [Acetobacter pasteurianus IFO 3283-22] gi|256646071|dbj|BAI12019.1| phage SPO1 DNA polymerase-related protein [Acetobacter pasteurianus IFO 3283-26] gi|256649124|dbj|BAI15065.1| phage SPO1 DNA polymerase-related protein [Acetobacter pasteurianus IFO 3283-32] gi|256652111|dbj|BAI18045.1| phage SPO1 DNA polymerase-related protein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655168|dbj|BAI21095.1| phage SPO1 DNA polymerase-related protein [Acetobacter pasteurianus IFO 3283-12] Length = 417 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 39/200 (19%), Positives = 75/200 (37%), Gaps = 17/200 (8%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 +A SL L + C L + T+ E LM +G P D ++++G+PF G Sbjct: 220 AQASSLASLSAEAMDCRACSLWQPANRTVFGEGVENTPLMFVGEQPGDQEDLAGRPFVGP 279 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIEL 184 G + D+ L+ I+R ++++ ++ +E CR + + +L Sbjct: 280 AGQVFDRALEEAGILRNHVYVTNAVKHFRFTWKNNRRLHQKPDQESVEACRIWLDAERKL 339 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK 244 + PK+++ +G + + L S L TVHP L++ P + Sbjct: 340 VHPKLIVMLGVTAAQSLLK-RPVTISRERSRIFQLDEQCSG---LVTVHPSYLLRLPNEE 395 Query: 245 KNTW------HALITLKKAL 258 L + + Sbjct: 396 AKAREYTRFVEDLRLAQSFI 415 >gi|254521313|ref|ZP_05133368.1| uracil DNA glycosylase superfamily protein [Stenotrophomonas sp. SKA14] gi|219718904|gb|EED37429.1| uracil DNA glycosylase superfamily protein [Stenotrophomonas sp. SKA14] Length = 472 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 88/218 (40%), Gaps = 17/218 (7%) Query: 53 ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMI 112 + P+ + + + + SL L+ + C L T+ T+ +M+ Sbjct: 254 PSQAPQRRIPMREDSATSSTDTRSLQNLRQQASACRQCPLWETATQTVFGQGPADARVMV 313 Query: 113 IGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRN 165 IG P D++++ G PF+G G +LD+ L + I R ++++ ++ Sbjct: 314 IGEQPGDTEDLRGLPFAGPAGQLLDRALAELGIDRATLYLTNAVKHFHHERRGKIRLHKR 373 Query: 166 LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI 225 + ++ CRP +M +I + P++++ +G F D ++ G+W L Sbjct: 374 PESRHIQACRPWLMGEIARVRPQVIVCLGATAAASVFGRDFNL-SRDRGRWHTLEDGTQS 432 Query: 226 IPTLATVHPQELIQY------PLIKKNTWHALITLKKA 257 ATVHP +++ + L L++ Sbjct: 433 Y---ATVHPAWVLRQGDDVRREAAYRLFRDDLARLQQK 467 >gi|116074927|ref|ZP_01472188.1| phage SPO1 DNA polymerase-related protein [Synechococcus sp. RS9916] gi|116068149|gb|EAU73902.1| phage SPO1 DNA polymerase-related protein [Synechococcus sp. RS9916] Length = 201 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 68/183 (37%), Gaps = 11/183 (6%) Query: 82 SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 C L + + + +M+IG P S++ G PF G++G +LD++L Sbjct: 12 EACGGCCRCSLSTQRQQVVVSRGNPNAQVMLIGEAPGASEDAQGLPFVGRSGQLLDQLLV 71 Query: 142 SIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF 200 + + I+ + PP NR S E+ CRP I QI ++ P +++ +G + Sbjct: 72 QAGLSPDRDLFITNVVKCRPPDNRKPSAKELSACRPWIEEQIAIVDPTVVILVGATAVSA 131 Query: 201 FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK-----NTWHALITLK 255 G W L HP L++ P T L ++ Sbjct: 132 MLGLKQAMRS-LRGVWIEQDQRSW----LPIFHPSYLLRNPSRDPGKPVSLTLEDLCQVR 186 Query: 256 KAL 258 L Sbjct: 187 DRL 189 >gi|239815784|ref|YP_002944694.1| phage SPO1 DNA polymerase-related protein [Variovorax paradoxus S110] gi|239802361|gb|ACS19428.1| phage SPO1 DNA polymerase-related protein [Variovorax paradoxus S110] Length = 237 Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 + +L L + +C L + + ++ G LM++G P D +++ G+PF G Sbjct: 6 EATAALKALSVATDACRECPLGAHATQSVFGEGPVGAALMVVGEQPGDKEDLVGRPFVGP 65 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIEL 184 G + D+ + + R +++++ ++ E++ C + ++EL Sbjct: 66 AGKLFDRAVAELGWSREKLYVTNAVKHFKYEPRGKRRMHKTPGQREVDACHHWLESEMEL 125 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ-YPLI 243 + P+ + +G + G+W + + L T+HP L++ PL Sbjct: 126 VQPRACIALGGTAARSLLGRPVAVM-KERGQW--VEDAATGRRVLVTLHPSALLRGDPLQ 182 Query: 244 KKNTWHALIT 253 ++ W A + Sbjct: 183 REAAWEAWLK 192 >gi|329850866|ref|ZP_08265711.1| uracil DNA glycosylase superfamily protein [Asticcacaulis biprosthecum C19] gi|328841181|gb|EGF90752.1| uracil DNA glycosylase superfamily protein [Asticcacaulis biprosthecum C19] Length = 278 Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats. Identities = 62/277 (22%), Positives = 115/277 (41%), Gaps = 26/277 (9%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPITNIRHI 59 M L ++I + F D + + + P N E++ +++ I Sbjct: 1 MFPSDDL-AKEIESYLGFLIDHELEESYANAPLNRTLSENKSPNPRAAASVTQIRVTPVA 59 Query: 60 HSPL--------------------VQQADSIAQKACSLHELKSLLRSFHDCHL-CSTSLS 98 +P + +A A A SL EL + L +F L + Sbjct: 60 SAPQGGSLNALKPQNLAGLDTGAVLHEAKQRAGSARSLDELYAELEAFQHMPLRHEGATQ 119 Query: 99 TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158 + T DL+++G P ++ SG+ F+GK G ++DK LQ+ ++ + ++ W Sbjct: 120 LVKFRGTADPDLIVVGECPDAEEDASGQAFAGKPGALIDKALQAAGVVE-RTLLTPCVFW 178 Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218 P G R L++ ++ + P + I L SPK +L +G + N D + + G+ Sbjct: 179 RPAGGRPLTDEDVSLTAPFMHALIRLASPKAILLLGAGAVSVVLNLDQRL-SELRGRVVG 237 Query: 219 LCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 + +P++A+ P L++ PL K W L+ LK Sbjct: 238 YHGEPN-VPSMASYPPNFLLRQPLAKGLFWRDLLQLK 273 >gi|282857034|ref|ZP_06266285.1| uracil-DNA glycosylase [Pyramidobacter piscolens W5455] gi|282585195|gb|EFB90512.1| uracil-DNA glycosylase [Pyramidobacter piscolens W5455] Length = 201 Score = 138 bits (348), Expect = 6e-31, Method: Composition-based stats. Identities = 45/196 (22%), Positives = 79/196 (40%), Gaps = 14/196 (7%) Query: 77 LHELKSLLRSFHDCHLCS--------TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128 L L + +C L ++ + E LMI+G P + +G+PF Sbjct: 4 LSALHRRVCQCRNCPLGQADGVREDGSAFYHVPGEGPENASLMIVGEAPGAEEERTGRPF 63 Query: 129 SGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188 G++G +L ++L + E+ R +I I+ I PP NRN E+ C P + Q E I P+ Sbjct: 64 VGRSGRLLTEILAAAELKREEIFITSICKCRPPKNRNPLKTEIAACLPWLTDQFEAIRPR 123 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT- 247 ++L +GN G++ + HP L++ P + + Sbjct: 124 LVLAVGNVPSQTLLGVKTGING-LRGRFHQFTWNGRRMTLRPLFHPAYLLRNPRRVEGSP 182 Query: 248 WH----ALITLKKALK 259 W L+ ++ L Sbjct: 183 WDKMLRDLVEARRFLA 198 >gi|296117296|ref|ZP_06835886.1| phage SPO1 DNA polymerase-related protein [Gluconacetobacter hansenii ATCC 23769] gi|295976062|gb|EFG82850.1| phage SPO1 DNA polymerase-related protein [Gluconacetobacter hansenii ATCC 23769] Length = 292 Score = 138 bits (348), Expect = 6e-31, Method: Composition-based stats. Identities = 60/284 (21%), Positives = 107/284 (37%), Gaps = 35/284 (12%) Query: 11 QILTIALFYADSGVYWVFDE-PNNE---------------------ATYESQRKEKSIDS 48 L++ Y + G P + + S Sbjct: 3 DSLSLLQLYVEWGADEALSPVPVDRLAQPQAKPPPPIQRARDEEHHFSRSPPSAPAVRPS 62 Query: 49 AIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQ 108 P + A A +A ++ EL + +F C L T+ T+ G Sbjct: 63 RPAPPPSAATTAELAAADARDRAARATTVEELHIAMATFGQCALRDTATHTVTPQGRPGA 122 Query: 109 DLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSN 168 +M++G P ++ G F G+TG + D+M SI + R + ++ + W PPG R S Sbjct: 123 HVMVVGEAPDADEDRGGMAFCGETGKLTDRMFGSIGLSRDDLFLAPVIAWRPPGGRPPSA 182 Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP------ 222 +E++ C P + R I L P+ L+ +GN + + G+W ++ P Sbjct: 183 MELKSCLPFLQRLIVLARPRRLILMGNIPV-ALLTGERITAARARGRWRDITVPENLSAT 241 Query: 223 ------HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 +IP L H Q+L P +++ W ++ L+K L+ Sbjct: 242 GNNSAVPHVIPALPMRHAQQLRASPTARRDAWKDMLELRKTLQE 285 >gi|294630778|ref|ZP_06709338.1| uracil-DNA glycosylase, family 4 [Streptomyces sp. e14] gi|292834111|gb|EFF92460.1| uracil-DNA glycosylase, family 4 [Streptomyces sp. e14] Length = 216 Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 63/193 (32%), Gaps = 10/193 (5%) Query: 56 IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115 A+ L L+ C L + T+ +M++G Sbjct: 2 PTTHAPEDAYTAEPFVPADADLAALREAAAGCRGCPLHRDATQTVFGAGDTTARVMLVGE 61 Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSN------- 168 P D ++ G+PF G G +LD+ L I + +++ Sbjct: 62 QPGDQEDRQGRPFVGPAGKLLDRALAEAGIDPGEAYVTNAVKHFKFTRAEPRKRRIHKAP 121 Query: 169 --IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII 226 EM C P + ++ L+ P++++ +G + + + G Sbjct: 122 TLREMTACGPWLAAELALVEPELIVVLGATAGKALLGSSFRV-TEVRGTVLEHEIHGRPE 180 Query: 227 PTLATVHPQELIQ 239 + TVHP +++ Sbjct: 181 RLVPTVHPSSVLR 193 >gi|332187341|ref|ZP_08389079.1| uracil-DNA glycosylase, 4 family protein [Sphingomonas sp. S17] gi|332012502|gb|EGI54569.1| uracil-DNA glycosylase, 4 family protein [Sphingomonas sp. S17] Length = 465 Score = 138 bits (347), Expect = 7e-31, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 77/250 (30%), Gaps = 19/250 (7%) Query: 24 VYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQAD--SIAQKACSLHELK 81 + + E + + + L+ Sbjct: 219 IGAMLKEMPRKYWKNMPETALVPQLIAGAQARETGMIDTAKVDVRSGRGGNAQAAWAALR 278 Query: 82 SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 C L + + T+ LM +G P D ++++G+PF G G + D+ + Sbjct: 279 DEAMGCTRCPLHAPATQTVFGEGPVDASLMFVGEQPGDQEDLAGRPFVGPAGQVFDRAVA 338 Query: 142 SIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 I R +++ + + + E++ CR + ++ LI PK+ + +G Sbjct: 339 EAGIDRATAYVTNAVKHFKFEPRGKRRIHSSPNAGEIQACRWWVEQERLLIQPKVTVALG 398 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKK----NTW 248 F + GK L + TVHP L++ P K+ Sbjct: 399 ATAARSLFG-KVMTIGRERGKALTLPDGGT---AFITVHPSYLLRLPDPAAKEVEYTRFV 454 Query: 249 HALITLKKAL 258 L AL Sbjct: 455 EDLKLAANAL 464 >gi|309790323|ref|ZP_07684890.1| phage SPO1 DNA polymerase-related protein [Oscillochloris trichoides DG6] gi|308227657|gb|EFO81318.1| phage SPO1 DNA polymerase-related protein [Oscillochloris trichoides DG6] Length = 210 Score = 138 bits (347), Expect = 8e-31, Method: Composition-based stats. Identities = 38/189 (20%), Positives = 75/189 (39%), Gaps = 7/189 (3%) Query: 73 KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 A ++ + +R+ C L + + +M+IG P ++ G+PF G + Sbjct: 2 SAETIQLIAQEVRTCTLCGLANGRTRAVPGEGPADARIMVIGEGPGFHEDRQGRPFVGPS 61 Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC-RPIIMRQIELISPKILL 191 G LD +L + R + I+ + PP NR+ E+ IC + RQI I P +++ Sbjct: 62 GKFLDDLLAMAGLSRETVFIANVVKCRPPQNRDPQPDEIAICTEHYLYRQIVAIDPPVIV 121 Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 +G + + ++ + G+ N+ + +HP + P + Sbjct: 122 TLGRFSMS--LFMPGERIMRVHGQPRNI----DGRLVVPMLHPAAALHQPQNRPLIEADF 175 Query: 252 ITLKKALKN 260 L + L Sbjct: 176 RRLPEILAQ 184 >gi|162450005|ref|YP_001612372.1| putative DNA polymerase related protein [Sorangium cellulosum 'So ce 56'] gi|161160587|emb|CAN91892.1| putative DNA polymerase related protein [Sorangium cellulosum 'So ce 56'] Length = 220 Score = 138 bits (347), Expect = 8e-31, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 79/207 (38%), Gaps = 17/207 (8%) Query: 65 QQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNIS 124 A ++ SL L+ C L T+ D++++G P D ++++ Sbjct: 17 ATAAALVPSPPSLPSLREAAARCRACPLWERGTQTVFGEGAARSDVLLVGEQPGDKEDLA 76 Query: 125 GKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPI 177 GKPF G G +LD+ L++ I R + +++ + + E+ C P Sbjct: 77 GKPFVGPAGQLLDRALEAAGIERRRAYVTNVVKHFKWEPRGKRRIHMKPDAREIRACLPW 136 Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237 + +I ++ P I++ +G + + G+ LATVHP + Sbjct: 137 LAAEIAVVQPAIVVCLGATAAQALLGGSFRV-TRERGRI---VASPLAPRVLATVHPASI 192 Query: 238 IQYPLI--KK----NTWHALITLKKAL 258 ++ P ++ L +AL Sbjct: 193 LRAPDEATRRAELSRFIEDLTVAARAL 219 >gi|110634843|ref|YP_675051.1| phage SPO1 DNA polymerase-related protein [Mesorhizobium sp. BNC1] gi|110285827|gb|ABG63886.1| phage SPO1 DNA polymerase-related protein [Chelativorans sp. BNC1] Length = 476 Score = 138 bits (347), Expect = 8e-31, Method: Composition-based stats. Identities = 37/239 (15%), Positives = 82/239 (34%), Gaps = 18/239 (7%) Query: 32 NNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCH 91 + R + +A + + + + + + L L+ ++S C Sbjct: 239 PDMVRAAGARVAEMETTAPETPPRFAERLAERMASISAQSGELLPLDVLREEIQSCRLCP 298 Query: 92 LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH 151 L + + ++M +G P D ++++G+PF G G + ++ L I R + + Sbjct: 299 LHGPATQAVPGEGAPEAEIMFVGEQPGDQEDLAGRPFVGPAGQVFERALLEAGIARQKTY 358 Query: 152 ISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204 ++ + S E+ CR + R+I + PK+++ +G Sbjct: 359 VTNAVKHFKFEPRGKRRVHMKPSGGEVSKCRFWLDREISAVKPKLVVALGATAMLGLTG- 417 Query: 205 DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK------NTWHALITLKKA 257 + G+ L TVHP L++ P ++ L + Sbjct: 418 RPVPVTKARGQV----IAADSFSILVTVHPSYLLRLPEKERAEAEYERFVEDLRKARDW 472 >gi|190895487|ref|YP_001985779.1| DNA-directed DNA polymerase protein [Rhizobium etli CIAT 652] gi|190699432|gb|ACE93516.1| probable DNA-directed DNA polymerase protein [Rhizobium etli CIAT 652] Length = 213 Score = 138 bits (347), Expect = 9e-31, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 77/199 (38%), Gaps = 17/199 (8%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 A S+ EL+ C L + T+ +++I+G P D ++I+G+PF G Sbjct: 16 ADADSIDELRHQAEGCTRCDLYRNATQTVFGEGPNKAEIVIVGEQPGDREDITGRPFVGP 75 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIEL 184 G++LD L+ + R + +++ + + E+ C + ++ + Sbjct: 76 AGHLLDHCLEEAGVDRQRCYVTNAVKHFKFTPRGKRRLHAKPNAGEIRRCAWWLGAELNI 135 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL-- 242 + PK+++ +G A+ G P + P L T+HP L++ Sbjct: 136 LQPKLIVTLGASALYALLGPKAKL-TPERGHILQ---PRNHPPILVTIHPSFLLRIRDEA 191 Query: 243 ----IKKNTWHALITLKKA 257 ++ L + + Sbjct: 192 EKHRQRQAFVSDLHKVAEF 210 >gi|54024698|ref|YP_118940.1| hypothetical protein nfa27290 [Nocardia farcinica IFM 10152] gi|54016206|dbj|BAD57576.1| hypothetical protein [Nocardia farcinica IFM 10152] Length = 211 Score = 138 bits (347), Expect = 9e-31, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 75/195 (38%), Gaps = 13/195 (6%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 L L++ ++ C L + + + ++G P D ++++G PF G Sbjct: 14 PADADLDTLRTAVQGCRGCELYRGATQAVFGEGPAHAPVFVVGEQPGDREDVAGHPFVGP 73 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIEL 184 G +LDK L +I R ++++ ++ E+ C P + +++ Sbjct: 74 AGRLLDKALTEADIDREAVYLTNAVKHFKFEERGKRRIHKQPGRTEVVACSPWLTAELDA 133 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK 244 + P++++ +G + + G+ +ATVHP +++ P + Sbjct: 134 VRPQLVVCLGAVAAKAVLGPSFKV-SERRGEVVEA----GEHRVIATVHPSSVLRAPD-R 187 Query: 245 KNTWHALITLKKALK 259 + + + ++ Sbjct: 188 AAAYADFLADLRKVR 202 >gi|89899005|ref|YP_521476.1| phage SPO1 DNA polymerase-like protein [Rhodoferax ferrireducens T118] gi|89343742|gb|ABD67945.1| phage SPO1 DNA polymerase-related protein [Rhodoferax ferrireducens T118] Length = 296 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 93/251 (37%), Gaps = 20/251 (7%) Query: 29 DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKA---CSLHELKSLLR 85 + P+N + + +A + + + + L + Sbjct: 43 EAPSNAIENVATNITTTGATAQKILKTSAPPETRGTATGSGVPATDVAGLDWPALTQAIA 102 Query: 86 SFHDCHLCSTSLSTICA--TQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143 + C LC + + A D +++G P D+D +G PF+G G +LD ML+++ Sbjct: 103 TCQACPLCIGRRTAVQAAPDAPRLADWLLVGEPPDDADEQAGAPFAGAAGQLLDNMLKAL 162 Query: 144 EIMRT--------------QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189 + R +++ I P RN + E+ C + R++ L+ PK+ Sbjct: 163 GLSRHAGSGVAAPAAQATTAAYVTPIVKCRPAQTRNPTQAELASCENYLRREVALVQPKV 222 Query: 190 LLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW 248 +L +G + LG+ + IP + + P L++ P K W Sbjct: 223 ILALGRFAAQGLLQGSLPGLAGTPLGQLRGQIYRYQGIPVIVSYPPSYLLRSPQHKARAW 282 Query: 249 HALITLKKALK 259 L ++AL+ Sbjct: 283 VDLCQAQEALR 293 >gi|329765399|ref|ZP_08256979.1| uracil-DNA glycosylase-like protein [Candidatus Nitrosoarchaeum limnia SFB1] gi|329138305|gb|EGG42561.1| uracil-DNA glycosylase-like protein [Candidatus Nitrosoarchaeum limnia SFB1] Length = 197 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 78/184 (42%), Gaps = 6/184 (3%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 ++ + + C L T +++ D++ +G P +++ G+PF G G L Sbjct: 6 EAIRQKVIACTKCDLSKTRTNSVPGKGNFQSDVIFVGEAPGRNEDKKGEPFVGIAGQRLS 65 Query: 138 KMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197 L+S + R I+I+ + PP NR + +E+++C + ++I +I PKI+ +GN Sbjct: 66 AALESAGVSRESIYITNVVKCRPPNNRIPTIMELDMCHDYLQKEIAIIKPKIICILGNTA 125 Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKA 257 N + + GK L TVHP I + +I L Sbjct: 126 FNSILG--GSEITKYRGKI---VKKDKEFYFL-TVHPAATIYNQELITVLKEDIIKLFDL 179 Query: 258 LKNL 261 ++ L Sbjct: 180 IREL 183 >gi|21233093|ref|NP_639010.1| DNA polymerase related protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770033|ref|YP_244795.1| DNA polymerase related protein [Xanthomonas campestris pv. campestris str. 8004] gi|21114947|gb|AAM42934.1| DNA polymerase related protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575365|gb|AAY50775.1| DNA polymerase related protein [Xanthomonas campestris pv. campestris str. 8004] Length = 425 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 45/234 (19%), Positives = 82/234 (35%), Gaps = 17/234 (7%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P E R+ + A A A SL +L+ R C Sbjct: 187 PEATLLPELIREAGVRVREMAERAPEPVRRRVPAAPAALPAVAAQSLAQLRVAARDCRRC 246 Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150 L + T+ + +M+IG P D +++SG+PF G G + ++ L + I R + Sbjct: 247 DLWQPATQTVFGEGPDDAAVMVIGEQPGDEEDLSGRPFVGPAGRLFNQALGELGIDRQRF 306 Query: 151 HISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 +++ +RN ++ C + + + P ++ +G Sbjct: 307 YVTNAVKHFRFEQRGKRRLHRNPERSHVQACNGWLQAERAQLRPAQIVCLGATAAQAVLG 366 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY--PLIK----KNTWHAL 251 + Q G+W L P LATVHP +++ P + + L Sbjct: 367 P-GFRLMQERGQWQRL---DDGTPVLATVHPSWVLRQGTPSARDAGYRGFVADL 416 >gi|307309406|ref|ZP_07589065.1| phage SPO1 DNA polymerase-related protein [Sinorhizobium meliloti BL225C] gi|306900136|gb|EFN30755.1| phage SPO1 DNA polymerase-related protein [Sinorhizobium meliloti BL225C] Length = 213 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 80/216 (37%), Gaps = 18/216 (8%) Query: 56 IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115 + A A+ A ++ L+ C L + + ++++G Sbjct: 2 PKQPAKLGPALAGEHAE-ATTIASLRRQAERCERCDLYKDATQLVFGEGPVDARVVLVGE 60 Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSN 168 P D ++++G+PF G G +LD+ L I R++ +++ + + Sbjct: 61 QPGDREDLAGRPFVGPAGRILDECLHEAGIDRSECYLTNAVKHFKFEQRGKRRLHSRPNA 120 Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT 228 E++ C + +++ + P+I++ +G + +N G L T Sbjct: 121 GEIQACAWWLGAELDELRPEIVVALGATALMSLLG-RSVGVTRNRG---ELLTAPGGFSV 176 Query: 229 LATVHPQELIQ-----YPLIKK-NTWHALITLKKAL 258 L T+HP L++ P ++ L + + Sbjct: 177 LVTIHPSYLLRIRGRSDPEAERARFVGDLAKVAARI 212 >gi|327194181|gb|EGE61045.1| DNA-directed DNA polymerase protein [Rhizobium etli CNPAF512] Length = 218 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 73/199 (36%), Gaps = 17/199 (8%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 A S+ +L+ C L + + + ++ ++G P D ++I+G+PF G Sbjct: 21 ADAESIADLRRQAEGCTRCDLYRNATQLVFGEGPDKAEVALVGEQPGDREDITGRPFVGP 80 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIEL 184 G++LD+ L+ + R + +++ + + E+ C + ++ + Sbjct: 81 AGHLLDQCLEEAGLDRQRCYVTNAVKHFKFTPRGKRRLHAKPNAGEIRRCAWWLGAELNI 140 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ----- 239 + PK+++ +G + G P L T+HP L++ Sbjct: 141 LQPKLVVALGATALYALLGPKVKL-TPERGHILQPTNRP---PVLVTIHPSYLLRIRDEA 196 Query: 240 -YPLIKKNTWHALITLKKA 257 ++ L + Sbjct: 197 EQHRQRRQFVSDLHKAAEF 215 >gi|116620515|ref|YP_822671.1| Fis family transcriptional regulator [Candidatus Solibacter usitatus Ellin6076] gi|116223677|gb|ABJ82386.1| transcriptional regulator, Fis family [Candidatus Solibacter usitatus Ellin6076] Length = 204 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 77/206 (37%), Gaps = 17/206 (8%) Query: 67 ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126 A ++ S L CHL + T+ LM++G P + ++++G Sbjct: 3 ASALIPVKLSWQSLHDAAGGCKACHLWEHATQTVFGEGKSHAPLMLVGEQPGNEEDLAGH 62 Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIM 179 PF G G +LD L++ I R Q +++ + + + E+ C P + Sbjct: 63 PFVGPAGRLLDDALEAAGIDRKQAYVTNVVKHFKWEPRGKRRIHAKPTTAEITACIPWLT 122 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 ++EL+ P+IL+ +G + + GK +ATVHP +++ Sbjct: 123 AELELVKPRILICLGATAAQALLGRTFRV-TKQRGKLVESKLAP---YVMATVHPSSILR 178 Query: 240 YPLIKKN------TWHALITLKKALK 259 P L + K L Sbjct: 179 APDADARHAEMQSFIADLKSAAKILA 204 >gi|13474291|ref|NP_105859.1| hypothetical protein mll5147 [Mesorhizobium loti MAFF303099] gi|14025043|dbj|BAB51645.1| mll5147 [Mesorhizobium loti MAFF303099] Length = 223 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 36/224 (16%), Positives = 82/224 (36%), Gaps = 17/224 (7%) Query: 48 SAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEG 107 +AI P + S+ EL+ + C L + T+ + Sbjct: 2 TAILPHRTQTSAGRASRARQALDEHFDGSISELREAAKGCRRCPLWRDATQTVFGEGPDN 61 Query: 108 QDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG----- 162 ++ +G P D ++++GKPF G G + D +L E+ R +++++ Sbjct: 62 AKVIFVGEQPGDQEDLAGKPFVGPAGKVFDAILDEAEVDRLKVYVTNAVKHFKFEPRGKR 121 Query: 163 --NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220 + + E++ CR + R+ LI P++ + +G A + G+ Sbjct: 122 RIHSKPNAGEVQACRWWLDREFALIKPELAVALGATAALSLLG-KAIPVTKMRGQVIE-- 178 Query: 221 TPHSIIPTLATVHPQELIQ------YPLIKKNTWHALITLKKAL 258 + T+HP +++ ++ + +K+ + Sbjct: 179 -REDGLRVFITIHPSFILRIHEPVDKEAERERFLRDMREVKRLM 221 >gi|257063504|ref|YP_003143176.1| uracil-DNA glycosylase, family 4 [Slackia heliotrinireducens DSM 20476] gi|256791157|gb|ACV21827.1| uracil-DNA glycosylase, family 4 [Slackia heliotrinireducens DSM 20476] Length = 213 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 5/180 (2%) Query: 82 SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 +R+ C+LC + + G +M+IG P ++++ GKPF G GN L ++L Sbjct: 28 DAVRACRKCYLCEGRTNAVPGFGNAGARIMLIGEAPGKNEDLQGKPFVGAAGNYLTELLG 87 Query: 142 SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 + R ++ I+ I PP NRN E+ C P + Q+ I P+ ++ +GN F Sbjct: 88 YAGLTREEVFIANILKCRPPSNRNPQPDEIFECTPYLRDQVRAIMPEYIVTMGNFATKFI 147 Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 D G L HP I ++ + L + L N+ Sbjct: 148 LRTDR-GITGLRGNL----QKTGQFSVLPVFHPAAAIYDRTKREVLEADFVYLGRLLGNV 202 >gi|56552010|ref|YP_162849.1| phage SPO1 DNA polymerase-related protein [Zymomonas mobilis subsp. mobilis ZM4] gi|241761912|ref|ZP_04759997.1| phage SPO1 DNA polymerase-related protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|56543584|gb|AAV89738.1| phage SPO1 DNA polymerase-related protein [Zymomonas mobilis subsp. mobilis ZM4] gi|241373592|gb|EER63164.1| phage SPO1 DNA polymerase-related protein [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 206 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 82/207 (39%), Gaps = 16/207 (7%) Query: 67 ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126 +++ +KA S +L L C L + +C + ++ +G P D ++++G+ Sbjct: 2 SEAAVKKAPSWEDLTEALHHCTRCALYQKATQVVCGEGSHTSPVIFVGEQPGDQEDLAGR 61 Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIM 179 PF G G + D+++ SI R +I+++ ++ + E++ CR + Sbjct: 62 PFVGPAGQVFDEVMASIGWPREEIYLTNAVKHFKFWLKGERRIHQTPAPEEVDCCRYWLR 121 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 ++ L+ P++ + +G GK L + P + T HP +++ Sbjct: 122 QEWRLLKPRLTIALGGTAVLALTGKKQTLGS-LRGKI--LTLGKAAAPFIVTYHPSYILR 178 Query: 240 YPLI--KKNTW----HALITLKKALKN 260 ++ + L + L Sbjct: 179 QASEEGRQRAYQAMQQDLTIARNFLAA 205 >gi|15889460|ref|NP_355141.1| hypothetical protein Atu2180 [Agrobacterium tumefaciens str. C58] gi|15157326|gb|AAK87926.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 481 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 45/210 (21%), Positives = 87/210 (41%), Gaps = 11/210 (5%) Query: 37 YESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTS 96 E++ E + +A QP + + + +L L R C L + Sbjct: 252 AEARVLEMAAKAASQPQPFHHRLQAAASAREMPQPVSDGTLQSLAREARQCTRCALHCKA 311 Query: 97 LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156 T+ E D+MI+G P D+++++GKPF G G + D+ L+ I R +++++ Sbjct: 312 TQTVFGEGPEDADIMIVGEQPGDNEDLAGKPFIGPAGQLFDRTLREIGAERKKLYVTNAV 371 Query: 157 PWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209 ++ + E+E CR + R+I L+ PK+++ +G +K Sbjct: 372 KHFKYETRGKRRIHQRPNAGEVEQCRWWLNREIALVRPKLIVAMGATALYALTGGK-EKV 430 Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 + G+ + TVHP L++ Sbjct: 431 SEIRGRPLPME---EGRTLFVTVHPSYLLR 457 >gi|114766766|ref|ZP_01445703.1| putative uracil-DNA glycosylase [Pelagibaca bermudensis HTCC2601] gi|114541023|gb|EAU44080.1| putative uracil-DNA glycosylase [Roseovarius sp. HTCC2601] Length = 316 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 85/223 (38%), Gaps = 12/223 (5%) Query: 27 VFDEP-NNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLR 85 + + P E E+Q + +++ A + IR +A L + L Sbjct: 69 LPEAPLIPELIAEAQSRAQAMADAAPSLPPIRAERITERLRAPEAPAPVGDREALLTGLA 128 Query: 86 SFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI 145 C L + + LMI+G P D ++++G+PF G G + D + + + Sbjct: 129 GCRRCPLWQNATQPVAGEGPLDAALMIVGEQPGDQEDLAGRPFVGPAGQLFDAVAERAGL 188 Query: 146 MRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTK 198 R + +++ +++ ++ E+ CR + + +L+ PK+++ +G Sbjct: 189 ARDRAYVTNAVKHFKFAPRGKRRLHQSPNSGEIAHCRWWLDMERQLVRPKLIVAMGASAA 248 Query: 199 NFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241 D ++ G P + T HP L++ P Sbjct: 249 ESLTG-DGRRIGTRRGTL---EQAPDGTPVMVTWHPSYLLRLP 287 >gi|74317499|ref|YP_315239.1| putative phage DNA polymerase [Thiobacillus denitrificans ATCC 25259] gi|74056994|gb|AAZ97434.1| putative phage DNA polymerase [Thiobacillus denitrificans ATCC 25259] Length = 235 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 77/205 (37%), Gaps = 11/205 (5%) Query: 43 EKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICA 102 + +A + A K S+ L+ R C L + T+ Sbjct: 7 RPARRAAHPEEAQMAEADDETPPTAAPFVPKTRSIDALRRAARGCRGCALYRNATQTVFG 66 Query: 103 TQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH--- 159 ++++G P + +++ G+PF G G +LD+ L + I R +++ + Sbjct: 67 EGASHARVLLVGEQPGNDEDLEGRPFVGSAGRVLDEGLAAAGIDRAATYVTNVVKHFKWE 126 Query: 160 ----PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK 215 + + E++ C P + R+I L+ P +++ +G D + + G+ Sbjct: 127 PSGKRRMHSKPNLREIDACFPWLEREIALLRPHLIVCLGATAAQALLGRDFRV-TRQRGQ 185 Query: 216 WSNLCTPHSIIPTLATVHPQELIQY 240 +AT+HP +++ Sbjct: 186 LVASPLAPH---VVATIHPSAILRQ 207 >gi|5932364|gb|AAD56917.1|AF180145_9 hypothetical protein; zm12orf4 [Zymomonas mobilis subsp. mobilis ZM4] Length = 206 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 83/207 (40%), Gaps = 16/207 (7%) Query: 67 ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126 +++ +KA S +L L H C L + +C + ++ +G P D ++++G+ Sbjct: 2 SEAAVKKAPSWEDLTEALHHCHSCALYQKATQVVCGEGSHTSPVIFVGEQPGDQEDLAGR 61 Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIM 179 PF G G + D+++ SI R +I+++ ++ + E++ CR + Sbjct: 62 PFVGPAGQVFDEVMASIGWPREEIYLTNAVKHFKFWLKGERRIHQTPAPEEVDCCRYWLR 121 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 ++ L+ P++ + +G GK L + P + T HP +++ Sbjct: 122 QEWRLLKPRLTIALGGTAVLALTGKKQTLGS-LRGKI--LTLGKAAAPFIVTYHPSYILR 178 Query: 240 YPLI--KKNTW----HALITLKKALKN 260 ++ + L + L Sbjct: 179 QASEEGRQRAYQAMQQDLTIARNFLAA 205 >gi|260752452|ref|YP_003225345.1| phage SPO1 DNA polymerase-related protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258551815|gb|ACV74761.1| phage SPO1 DNA polymerase-related protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 206 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 82/207 (39%), Gaps = 16/207 (7%) Query: 67 ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126 +++ +KA S +L L C L + +C + ++ +G P D ++++G+ Sbjct: 2 SEAAVKKAPSWEDLTEALHHCTRCALYQKATQVVCGEGSHTSPVIFVGEQPGDQEDLAGR 61 Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIM 179 PF G G + D+++ SI + +I+++ ++ + E++ CR + Sbjct: 62 PFVGPAGQVFDEVMASIGWPKEEIYLTNAVKHFKFWLKGERRIHQTPAPEEVDCCRYWLR 121 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 ++ L+ P++ + +G GK L + P + T HP +++ Sbjct: 122 QEWRLLKPRLTIALGGTAVLALTGKKQTLGS-LRGKI--LTLGKAAAPFIVTYHPSYILR 178 Query: 240 YPLI--KKNTW----HALITLKKALKN 260 ++ + L + L Sbjct: 179 QASEEGRQRAYQAMQQDLTMARNFLAA 205 >gi|225164210|ref|ZP_03726485.1| phage SPO1 DNA polymerase-related protein [Opitutaceae bacterium TAV2] gi|224801184|gb|EEG19505.1| phage SPO1 DNA polymerase-related protein [Opitutaceae bacterium TAV2] Length = 310 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 48/226 (21%), Positives = 80/226 (35%), Gaps = 23/226 (10%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCH-LCSTSLSTICATQTEGQD 109 + + P KA LK L+ + C + T Sbjct: 75 RSAQSAAASLPPPPVVTLPDGDKATRWACLKDLVTNHPICRANVRPGTLPVLGVGTLDAK 134 Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP-------- 161 +M +G P + + G+PF G G +L +M+ + + R ++I I W P Sbjct: 135 IMFVGEAPGAEEEVRGEPFVGPAGQLLTRMIAGMGLKREDVYIGNIMNWRPQIPTPPGCE 194 Query: 162 --GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN-NDAQKTYQNLGKWSN 218 GNR S EME C P Q+ +++P IL+ +G + + Q G+W Sbjct: 195 QIGNRPPSQAEMEFCLPFFRAQVAIVNPDILVALGKTAAQGMLGLGNVKTLGQVRGRWHT 254 Query: 219 LCTPHSIIPTLATVHPQELIQYPLI-------KKNTWHALITLKKA 257 P + T HP L+ K+ W L+ + + Sbjct: 255 FDGK----PLMVTYHPSYLLHQSDQSARAKQSKRMIWEDLLQVMER 296 >gi|163746768|ref|ZP_02154125.1| uracil-DNA glycosylase, putative [Oceanibulbus indolifex HEL-45] gi|161379882|gb|EDQ04294.1| uracil-DNA glycosylase, putative [Oceanibulbus indolifex HEL-45] Length = 476 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 72/185 (38%), Gaps = 13/185 (7%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 + EL + +R+ C L + + DLM++G P D ++++G+PF G G M Sbjct: 282 MEELPAAIRACTRCPLHCHATQAVPGEGPTRADLMVVGEQPGDQEDLAGRPFVGPAGQMF 341 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKI 189 D++ + R +++ ++ E++ CR + ++ + PK+ Sbjct: 342 DRVASEAGLDREAAYVTNAVKHFKFTARGKRRIHQRPETSEIDQCRWWVNAEVAQVQPKL 401 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKKNT 247 +L +G + G IP L T+HP L++ P +++ Sbjct: 402 ILAMGATAAQSLTG-SGAGILKRRGTI---EAGPEGIPVLITLHPSYLLRVPDPALREEA 457 Query: 248 WHALI 252 Sbjct: 458 EAQFR 462 >gi|256371255|ref|YP_003109079.1| phage SPO1 DNA polymerase-related protein [Acidimicrobium ferrooxidans DSM 10331] gi|256007839|gb|ACU53406.1| phage SPO1 DNA polymerase-related protein [Acidimicrobium ferrooxidans DSM 10331] Length = 189 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 39/166 (23%), Positives = 73/166 (43%), Gaps = 6/166 (3%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L++ +R+ H C L + + L+++G P ++ G+PF G++G Sbjct: 4 PELEALEAEVRACHACRLSAGRHQAVPGEGAAPAPLLVVGEGPGAREDELGRPFVGRSGQ 63 Query: 135 MLDKMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 +LD +L + R+ ++I+ PPGNR E+E CR + RQI L+ P +++ + Sbjct: 64 LLDALLADETGLDRSGLYIANTVKCRPPGNRTPRPDEVEACRGFLARQIHLVDPVVIVAL 123 Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 G +F + G+ + T HP ++ Sbjct: 124 GQSAAAWFLGP-GARVGALRGQVLEWE----GRALVVTYHPSAALR 164 >gi|258541499|ref|YP_003186932.1| bacteriophage-type DNA polymerase [Acetobacter pasteurianus IFO 3283-01] gi|256632577|dbj|BAH98552.1| bacteriophage-type DNA polymerase [Acetobacter pasteurianus IFO 3283-01] gi|256635634|dbj|BAI01603.1| bacteriophage-type DNA polymerase [Acetobacter pasteurianus IFO 3283-03] gi|256638689|dbj|BAI04651.1| bacteriophage-type DNA polymerase [Acetobacter pasteurianus IFO 3283-07] gi|256641743|dbj|BAI07698.1| bacteriophage-type DNA polymerase [Acetobacter pasteurianus IFO 3283-22] gi|256644798|dbj|BAI10746.1| bacteriophage-type DNA polymerase [Acetobacter pasteurianus IFO 3283-26] gi|256647853|dbj|BAI13794.1| bacteriophage-type DNA polymerase [Acetobacter pasteurianus IFO 3283-32] gi|256650906|dbj|BAI16840.1| bacteriophage-type DNA polymerase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256653897|dbj|BAI19824.1| bacteriophage-type DNA polymerase [Acetobacter pasteurianus IFO 3283-12] Length = 284 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 67/281 (23%), Positives = 107/281 (38%), Gaps = 32/281 (11%) Query: 9 QEQILTIALFYADSGVY-WVFDEPNNEATYESQ-------------------------RK 42 E L++ Y + GV V D P + + R Sbjct: 2 MEAALSLLRLYTEWGVDVAVTDAPVDHRHAGAGLVLPPLRGKTPPQAPPYIPPQPGTGRT 61 Query: 43 EKSIDSAIQPITNIRHIHS--PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI 100 P S V+QA +A A + EL + SF C L ++ T+ Sbjct: 62 PAPAAVTQNPAQQPPVPTSFADTVEQAQRLAAAANTPEELFEAMDSFTACPLRGAAMHTL 121 Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160 + LM+IG P + ++ SG+ F+G G MLD ML + + R+Q+ ++ PW P Sbjct: 122 MPSGPRNAPLMLIGEAPDEDEDRSGQVFAGLCGTMLDTMLAPLPLERSQLALATALPWRP 181 Query: 161 PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220 G + ++ ICRP + R I L +P+ LL G W N+ Sbjct: 182 AGGTPPTEMDQRICRPFLERAITLFAPQRLLLCGRLPARMLLGKTTDL---PRRNWQNIT 238 Query: 221 TPHS-IIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 P +P + HP +L P ++ W L+T+ L+ Sbjct: 239 LPGLPPLPVMFMRHPLQLRASPAARREIWTTLMTVMDTLRQ 279 >gi|302389751|ref|YP_003825572.1| phage SPO1 DNA polymerase-related protein [Thermosediminibacter oceani DSM 16646] gi|302200379|gb|ADL07949.1| phage SPO1 DNA polymerase-related protein [Thermosediminibacter oceani DSM 16646] Length = 252 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 17/205 (8%) Query: 68 DSIAQKACSLHELKSLLR----SFHDCHLC--STSLSTICATQTEGQDLMIIGYTPSDSD 121 D Q A LK+ + +C L + LM+IG P + Sbjct: 48 DKGEQSAKMRDFLKNEVLKLLYECGECPLHLAECHTQKVPGDGDWNSPLMLIGEGPGFEE 107 Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ 181 + GKPF G+ G +L +L + I R +++I+ + PP NR + E++ C+ I+ + Sbjct: 108 DKQGKPFVGRAGQLLTAILNKLNIDRKKVYITNVVKCRPPMNRTPQSKEIKACKRILELE 167 Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241 +E I+PK+++ +G+ N+F Q+ G+W + T HP +++ Sbjct: 168 LEFIAPKVIITLGSVPLNYF--KPNSSIMQSRGQW----IYKRGFWIMPTFHPAYILRQG 221 Query: 242 LI-----KKNTWHALITLKKALKNL 261 K W + ++ L Sbjct: 222 GETLKRVKWQVWGDFNKAIEKVREL 246 >gi|163739158|ref|ZP_02146570.1| uracil-DNA glycosylase, putative [Phaeobacter gallaeciensis BS107] gi|161387558|gb|EDQ11915.1| uracil-DNA glycosylase, putative [Phaeobacter gallaeciensis BS107] Length = 481 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 78/235 (33%), Gaps = 16/235 (6%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKA---CSLHELKSLLRSF 87 P A E + A+ QA EL + + S Sbjct: 233 PEAAAIPELIATAPARARAMAEAAPTLPPLRAARVQARLPEANPHWQGPAAELPAAINSC 292 Query: 88 HDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR 147 C L + + DLMI+G P D +++ G+PF G G + D++ + R Sbjct: 293 TRCPLHGPATQAVPGEGPTDADLMIVGEQPGDQEDLVGRPFVGPAGQLFDQLATEAGLPR 352 Query: 148 TQIHISMISPW-------HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF 200 +++ ++ + E+ C+ + +++ + PK +L +G Sbjct: 353 EAAYVTNAVKHFKFLPRGRKRLHQQPNGSEIRHCQVWLRAELDQVRPKRILALGATAAEA 412 Query: 201 FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL--IKKNTWHALIT 253 + Q G P L T+HP L++ P +++ L Sbjct: 413 LLG-SGKDILQRRGTI---ERRVDGTPVLITLHPSYLLRVPDRYLRERATEDLRA 463 >gi|108762098|ref|YP_630262.1| uracil-DNA glycosylase [Myxococcus xanthus DK 1622] gi|108465978|gb|ABF91163.1| uracil-DNA glycosylase, family 4 [Myxococcus xanthus DK 1622] Length = 231 Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 43/223 (19%), Positives = 86/223 (38%), Gaps = 21/223 (9%) Query: 56 IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQT----EGQDLM 111 + A + ++ + +L+ C L T T+ G +M Sbjct: 3 AMPKRPSVQTTAAPLIPESPTYDKLRKAAAGCQACPLWRTGTQTVFGEPEGQPRPGPRVM 62 Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPGNRNLSN 168 ++G P D ++ +G+PF G +G +LD+ L++ I R Q++++ W G R + Sbjct: 63 LVGEQPGDQEDRAGRPFVGPSGRLLDEALEAAGIDRAQVYVTNTVKHFKWTGQGPRRIHA 122 Query: 169 I----EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS 224 E+ C P + +I + P +L+ +G A + Q+ G+ Sbjct: 123 KPTTTEIRACLPWLEAEIRVFRPDVLVCLGATAAQALLG-KAFRVTQSRGQPMASEWARV 181 Query: 225 IIPTLATVHPQELIQYPLIKKN------TWHALITLKKALKNL 261 +ATVHP +++ P + L + + + L Sbjct: 182 ---VVATVHPSSILRAPDPRAKEAALEAFVDDLRQVARIIHGL 221 >gi|209546253|ref|YP_002278143.1| phage SPO1 DNA polymerase-related protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539110|gb|ACI59043.1| phage SPO1 DNA polymerase-related protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 213 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 82/212 (38%), Gaps = 18/212 (8%) Query: 59 IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPS 118 + S A +A+ A S+ EL+ C L + + +++++G P Sbjct: 4 VASAGPALALDVAE-AESIAELRHQAEGCTRCDLYRNATQIVFGEGPGKAEIVLVGEQPG 62 Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEM 171 D ++++G+PF G G +LD+ L+ + R + +++ + + E+ Sbjct: 63 DQEDLAGRPFVGPAGRLLDRCLEEAGLDRRRCYVTNAVKHFKFTQRGKRRLHAKPNAGEI 122 Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231 + C + +I ++ PK+++ +G + G P + P L T Sbjct: 123 KRCAWWLGAEINILKPKLVVTLGASALYALLGPKVKL-TPERGHILQ---PANHPPVLVT 178 Query: 232 VHPQELIQ------YPLIKKNTWHALITLKKA 257 +HP L++ ++++ L Sbjct: 179 IHPSYLLRIRDEAEQQRLRQDFVSDLHKAAAF 210 >gi|57234761|ref|YP_181181.1| uracil-DNA glycosylase, putative [Dehalococcoides ethenogenes 195] gi|57225209|gb|AAW40266.1| uracil-DNA glycosylase, putative [Dehalococcoides ethenogenes 195] Length = 189 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 6/171 (3%) Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150 +L +T + +M IG P +++ G+PF G G L +++ SI + R + Sbjct: 5 NLHTTRTHAVPGEGNADAKIMFIGEAPGFNEDQQGRPFVGAAGKFLTELIHSIGLRREDV 64 Query: 151 HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210 +I+ + PPGNR+ E+ CR + RQIE+I PKI++ +G + +F Sbjct: 65 YITNVVKDRPPGNRDPLPDEISACRNFLDRQIEIIKPKIIVTLGRYSMARYFTGSTIS-- 122 Query: 211 QNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + + HP + ++K ++ + L+ L Sbjct: 123 ----RIHGKPMRRDGVIYYPMYHPAAALHQGGLRKEIEQDMLRIPGLLEEL 169 >gi|33863050|ref|NP_894610.1| Uracil-DNA glycosylase [Prochlorococcus marinus str. MIT 9313] gi|33634967|emb|CAE20953.1| Uracil-DNA glycosylase [Prochlorococcus marinus str. MIT 9313] Length = 207 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 76/180 (42%), Gaps = 11/180 (6%) Query: 85 RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIE 144 C L + + LM+IG P ++ GKPF G++G ++D++++S+ Sbjct: 13 NGCGSCDLPVNQPQVVVSRGNPHASLMLIGEAPGAREDELGKPFVGRSGQLIDRLMESVG 72 Query: 145 IMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 + +I + PP NR + +E+ CRP + +QIEL+ P ++ G+ Sbjct: 73 LDPQTDAYICNVVKCRPPKNRRPTLVEIASCRPWLQQQIELVDPCVIALAGSTAVEAILG 132 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL-----IKKNTWHALITLKKAL 258 + G+W + + +HP L++ P T L+ +++ L Sbjct: 133 IKG-GITRLRGQWQHWQ----GRLLMPLLHPAYLLRNPSPVDGAPVALTRGDLLEVRQRL 187 >gi|254776520|ref|ZP_05218036.1| hypothetical protein MaviaA2_17874 [Mycobacterium avium subsp. avium ATCC 25291] Length = 221 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 43/220 (19%), Positives = 83/220 (37%), Gaps = 21/220 (9%) Query: 59 IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPS 118 + AD + + LK + C L + + T+ G +M++G P Sbjct: 2 TATSKAPGADRYLPEQRDIEALKHAAETCRGCSLFADATQTVFGNGHPGAPIMLVGEQPG 61 Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG--------NRNLSNIE 170 D ++ +G PF G G +L + LQ I + + ++ E Sbjct: 62 DQEDRAGAPFVGPAGRLLARALQDAGIDPGLTYQTNAVKHFKFTRKDGKRRIHQKPGRTE 121 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP--- 227 + CRP ++ +IE + P+I++ +G + + Q G+ L +IP Sbjct: 122 IVACRPWLITEIEAVHPRIIVCLGATAAQSLLGTSFRVSTQ-RGQPLKLPASPEVIPDVS 180 Query: 228 ----TLATVHPQELIQYPLIK-----KNTWHALITLKKAL 258 +ATVHP +++ + + L + + AL Sbjct: 181 PEPVLVATVHPSSVLRDRSERHDEVYRLFVDDLRSARSAL 220 >gi|21233304|ref|NP_639221.1| DNA polymerase-related protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770264|ref|YP_245026.1| DNA polymerase-related protein [Xanthomonas campestris pv. campestris str. 8004] gi|188993464|ref|YP_001905474.1| putative phage-related protein [Xanthomonas campestris pv. campestris str. B100] gi|21115573|gb|AAM43495.1| DNA polymerase-related protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575596|gb|AAY51006.1| DNA polymerase-related protein [Xanthomonas campestris pv. campestris str. 8004] gi|167735224|emb|CAP53436.1| putative phage-related protein [Xanthomonas campestris pv. campestris] Length = 219 Score = 136 bits (341), Expect = 4e-30, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 82/218 (37%), Gaps = 18/218 (8%) Query: 56 IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115 +PL + D++ + +L L++ + C L + + LMIIG Sbjct: 7 PSAPTTPLAKPVDTV--PSGTLTALRAQAQDCRRCDLWKPATQVVFGAGPARAPLMIIGE 64 Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSN 168 P D ++ G+PF G G +L ++ + +++ ++ + Sbjct: 65 QPGDQEDQQGRPFVGPAGQLLGTLMADAGLDPAMAYVTNTVKHFKFVPRGKRRLHQRATA 124 Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT 228 E CRP + ++ + P+I+L +G F +A + G+W L Sbjct: 125 GEQAACRPWLAAELLRVRPRIVLALGAMAAQTLFG-NAFRLTTERGQWRALDGR---TTA 180 Query: 229 LATVHPQELIQ-----YPLIKKNTWHALITLKKALKNL 261 LA+ HP +++ + L + AL NL Sbjct: 181 LASWHPSAILRMREPDRTATRALLREDLAQVAAALDNL 218 >gi|41409354|ref|NP_962190.1| hypothetical protein MAP3256c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398174|gb|AAS05804.1| hypothetical protein MAP_3256c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 221 Score = 136 bits (341), Expect = 4e-30, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 82/220 (37%), Gaps = 21/220 (9%) Query: 59 IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPS 118 + AD + + LK + C L + + T+ G +M++G P Sbjct: 2 TATSKAPGADRYLPEQRDIEALKHAAETCRGCSLFADATQTVFGNGHPGAPIMLVGEQPG 61 Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG--------NRNLSNIE 170 D ++ +G PF G G +L + L I + + ++ E Sbjct: 62 DQEDRAGAPFVGPAGRLLARALHDAGIDPGLTYQTNAVKHFKFTRKDGKRRIHQKPGRTE 121 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP--- 227 + CRP ++ +IE + P++++ +G + + Q G+ L +IP Sbjct: 122 IVACRPWLIAEIEAVHPRVIVCLGATAAQSLLGTSFRVSTQ-RGQPLKLPASPEVIPDVA 180 Query: 228 ----TLATVHPQELIQYPLIK-----KNTWHALITLKKAL 258 +ATVHP +++ + + L + + AL Sbjct: 181 PEPVLVATVHPSSVLRDRSERHDEVYRLFVDDLRSARSAL 220 >gi|218679206|ref|ZP_03527103.1| phage SPO1 DNA polymerase-related protein [Rhizobium etli CIAT 894] Length = 209 Score = 136 bits (341), Expect = 5e-30, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 75/198 (37%), Gaps = 17/198 (8%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 A S+ L+ C L + + +++++G P D +++SGKPF G Sbjct: 16 ADATSIAGLRHQAEGCTRCDLYRNATQIVFGEGAGQAEIVLVGEQPGDREDLSGKPFVGP 75 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIEL 184 G +LD+ L+ + R + +++ + + E+ C + ++ + Sbjct: 76 AGRLLDQCLEEAGLDRERCYVTNAVKHFKFTSRGKRRLHAKPNAGEIRRCAWWLGAELNI 135 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ----- 239 I PK+++ +G + T + P P L T+HP L++ Sbjct: 136 IKPKLVVTLGASALYALLGPKVKLTPERGHILHPANRP----PVLVTIHPSYLLRIRDEA 191 Query: 240 -YPLIKKNTWHALITLKK 256 ++++ L + Sbjct: 192 EQRRLRRDFVSDLHMAAE 209 >gi|329115091|ref|ZP_08243846.1| Phage SPO1 DNA Polymerase-Related Protein [Acetobacter pomorum DM001] gi|326695534|gb|EGE47220.1| Phage SPO1 DNA Polymerase-Related Protein [Acetobacter pomorum DM001] Length = 284 Score = 136 bits (341), Expect = 5e-30, Method: Composition-based stats. Identities = 61/281 (21%), Positives = 102/281 (36%), Gaps = 32/281 (11%) Query: 9 QEQILTIALFYADSGVYWVFDE---------------PNNEATYESQRKEKSIDSAIQPI 53 E L++ Y + GV + P T + Sbjct: 2 MEAALSLLRLYTEWGVDVAVTDAAVDHRHAGAGLVLPPLRGKTPQQAPPYTPPQLGTGRT 61 Query: 54 TNIRHIH-------------SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI 100 + V+QA +A A + EL + SF C L ++ T+ Sbjct: 62 PAPATTAQRPPQQQPGPTSFADTVEQAQRLAAAATTPEELFQAMDSFMACPLRGAAMHTL 121 Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160 LM+IG P + ++ SG+ F+G G +LD ML + + R+Q+ ++ PW P Sbjct: 122 MPAGPHHAPLMLIGEAPDEDEDRSGQVFAGLCGTLLDTMLAPLPLERSQLALATALPWRP 181 Query: 161 PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220 G + ++ ICRP + R I L +P+ LL G W + Sbjct: 182 AGGTAPTEMDQRICRPFLERAITLFAPQRLLLCGRLPARMLLGKTTDL---PRRNWQEIT 238 Query: 221 TPHSI-IPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 P +P + HP +L P ++ W L+T+ L+ Sbjct: 239 LPGLPALPVMVMRHPLQLRASPAARREIWATLMTVMDTLRQ 279 >gi|323135754|ref|ZP_08070837.1| Uracil-DNA glycosylase superfamily [Methylocystis sp. ATCC 49242] gi|322398845|gb|EFY01364.1| Uracil-DNA glycosylase superfamily [Methylocystis sp. ATCC 49242] Length = 281 Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 96/274 (35%), Gaps = 22/274 (8%) Query: 8 SQEQILTIALFYADSGVYWVFD-EPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQ 66 ++E +L + +Y +SG + D P++ ++ + R + Sbjct: 9 TREALLALLDWYVESGADFALDDSPHDRYADSARAPTAVSEPPPPSRAVERGEPRAPLTP 68 Query: 67 ADSIAQK--------------------ACSLHELKSLLRSFHDCHLCSTSLSTICATQTE 106 A A+ A L +L + L F + + Sbjct: 69 APRRARPETLIAPPDEAARAAEATAAAARDLDDLAARLADFPHAPFRDMARHFLFGAGAP 128 Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL 166 G LM P ++ G FSG+ +LD ML +I + R ++ +SPW PPG++ L Sbjct: 129 GARLMAFDAAPGATEESGGAAFSGERAKLLDNMLAAIGLDRGSARLAYVSPWRPPGDKAL 188 Query: 167 SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII 226 + EM + P R +EL P++LL G + + GK ++ Sbjct: 189 TPQEMAVFAPFARRHVELARPEVLLLFGEAPARIML-ETGEPLAKLRGKCFDVRCGDHAA 247 Query: 227 PTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 +++ +K W L L++ Sbjct: 248 RAFVFSSLDAMLKSAGLKPAAWRDLRAAAALLRS 281 >gi|209967194|ref|YP_002300109.1| Uracil DNA glycosylase superfamily [Rhodospirillum centenum SW] gi|209960660|gb|ACJ01297.1| Uracil DNA glycosylase superfamily [Rhodospirillum centenum SW] Length = 230 Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 79/214 (36%), Gaps = 17/214 (7%) Query: 59 IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPS 118 A A ++ L+ C L T T+ E L+++G P Sbjct: 2 PPRAPPDTAARFLPPARTIPALREAAAGCTACPLHETGTRTVFGEGPERARLVLVGEQPG 61 Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPGNRNLSNI----EM 171 D ++ G+PF G G ++D L + I RT I+++ W G+R L E+ Sbjct: 62 DREDAQGRPFVGPAGQLMDLALNAAGIDRTGIYVTNAVKHFKWVQRGHRRLHEKPGRLEI 121 Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231 C P + +I I+P+ ++ +G + + G++ I AT Sbjct: 122 LACLPWLENEIAAIAPEGIVCLGATAAQALIGRTFKV-TEERGQFLRTPLAGWIT---AT 177 Query: 232 VHPQELIQ--YPLIKKNTWH----ALITLKKALK 259 VHP L++ ++ + L + L Sbjct: 178 VHPSSLLRIEDRETQRAAYERFVDDLARIADRLA 211 >gi|332557671|ref|ZP_08411993.1| phage SPO1 DNA polymerase-related protein [Rhodobacter sphaeroides WS8N] gi|332275383|gb|EGJ20698.1| phage SPO1 DNA polymerase-related protein [Rhodobacter sphaeroides WS8N] Length = 485 Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats. Identities = 41/241 (17%), Positives = 84/241 (34%), Gaps = 17/241 (7%) Query: 34 EATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLC 93 E E Q + A + + A S SL E K+ C L Sbjct: 248 ERAAEMQAAAPTEPPARTAAVARQRAAAAGGPPAASDGSAPGSLAEAKTAAEGCRRCGLW 307 Query: 94 STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHIS 153 + + + +MI+G P D ++++G+PF G G + D+ + + R ++++ Sbjct: 308 ANATQVVFGEGPATARMMIVGEQPGDREDLAGRPFVGPAGQLFDEEAAAAGLDRGSVYVT 367 Query: 154 MISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206 ++ E+ CR + + +L+ P++++ +G Sbjct: 368 NAVKHFKFTPRGKRRIHQKPDAGEVTACRWWLDLERDLVRPRLIVAMGATALASLTG-SG 426 Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL------IKKNTWHALITLKKALKN 260 + G L P TVHP +++ P ++ L ++ L+ Sbjct: 427 AGILKRRGSVERL---DDGTPLFVTVHPSYILRLPDEAARAEERRRFRADLEEARQLLER 483 Query: 261 L 261 L Sbjct: 484 L 484 >gi|118575792|ref|YP_875535.1| uracil-DNA glycosylase [Cenarchaeum symbiosum A] gi|118194313|gb|ABK77231.1| uracil-DNA glycosylase [Cenarchaeum symbiosum A] Length = 216 Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 71/182 (39%), Gaps = 6/182 (3%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L + + + C LC + + T +++G P +++ GKPF G G +L Sbjct: 38 LGGIAARVSVCTRCGLCEGRTNAVPGTGPASARAILVGEAPGREEDLQGKPFVGGAGRVL 97 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 DK L+ I R+ ++I+ + PP NR S+ E + C + +I +I+P+I+ +G Sbjct: 98 DKELERAGIPRSTVYITNVVKCRPPKNRVPSDEERDACIEYLKEEISVINPRIVCILGAT 157 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 G N L ++HP + + + L Sbjct: 158 ALRSLLGLGG--ITGIRGTIINQDNTDY----LVSLHPAATMYRRDLLPAFRRDMKKLAG 211 Query: 257 AL 258 + Sbjct: 212 MI 213 >gi|171913025|ref|ZP_02928495.1| phage SPO1 DNA polymerase-related protein [Verrucomicrobium spinosum DSM 4136] Length = 315 Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats. Identities = 45/233 (19%), Positives = 91/233 (39%), Gaps = 37/233 (15%) Query: 40 QRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLST 99 +R S S + P R + KA SL L+ ++ Sbjct: 85 ERISLSAPSPLTPQAQTRDEMLAHLALEAENNDKARSLGTLRDIM--------------- 129 Query: 100 ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH 159 + AT T +++ +G P + +PF G G +L K++Q++ + R ++I+ I + Sbjct: 130 VFATGTPDAEIVFVGEAPGAEEEKMREPFVGPAGQLLTKIIQAMGLRRNDVYITNICKFR 189 Query: 160 PP---------GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210 P NR S EM C+ ++ ++E+I PK+++ +G+ Sbjct: 190 PKIDDGRFQGAKNRAPSVGEMLSCQQFVLAELEIIKPKVIVALGSTAATGL--GIEGTVG 247 Query: 211 QNLGKWSNLCTPHSIIPTLATVHPQELIQYP-------LIKKNTWHALITLKK 256 + G++ + P + T HP L++ K+ W ++ + + Sbjct: 248 RLRGQFHDF----RGTPIMVTYHPSYLLRREQEDGGGIAEKRLVWEDMMKVMQ 296 >gi|116255511|ref|YP_771344.1| putative uracil-DNA glycosylase [Rhizobium leguminosarum bv. viciae 3841] gi|115260159|emb|CAK03262.1| putative uracil-DNA glycosylase [Rhizobium leguminosarum bv. viciae 3841] Length = 213 Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 75/199 (37%), Gaps = 17/199 (8%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 A S+ EL+ C L + + +++++G P D ++++G+PF G Sbjct: 16 ADADSIAELRHQAEGCTRCDLFRNATQVVFGEGLVKSEIVLVGEQPGDQEDLTGRPFVGP 75 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIEL 184 G +LD+ L+ + R + +++ + + E+ C + ++ + Sbjct: 76 AGRLLDRCLEEAGLDRQRCYVTNAVKHFKFTPRGKRRLHAKPNAGEIRRCAWWLGAELNI 135 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ----- 239 + PK+++ +G +A+ T + P P L T+HP L++ Sbjct: 136 LQPKLVVALGASALYALLGPNAKLTPERGHILHPTNRP----PVLVTIHPSYLLRIRDEQ 191 Query: 240 -YPLIKKNTWHALITLKKA 257 ++ L Sbjct: 192 EQHRQRREFVSDLHKAAAF 210 >gi|163846564|ref|YP_001634608.1| phage SPO1 DNA polymerase-like protein [Chloroflexus aurantiacus J-10-fl] gi|222524355|ref|YP_002568826.1| phage SPO1 DNA polymerase-related protein [Chloroflexus sp. Y-400-fl] gi|163667853|gb|ABY34219.1| phage SPO1 DNA polymerase-related protein [Chloroflexus aurantiacus J-10-fl] gi|222448234|gb|ACM52500.1| phage SPO1 DNA polymerase-related protein [Chloroflexus sp. Y-400-fl] Length = 210 Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 72/186 (38%), Gaps = 7/186 (3%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 +L + ++ C+L + +M+IG P ++ G+PF G +G Sbjct: 6 TLFAIAQEVQHCTACNLHKGRTRAVPGEGPANARIMLIGEGPGYHEDRQGRPFVGPSGQF 65 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP-IIMRQIELISPKILLFIG 194 L +L + R +++I+ + PP NR+ E+ C +MRQI I P +++ +G Sbjct: 66 LTDLLALAGLRRDEVYIANVVKCRPPQNRDPEPEEIATCTKLFLMRQIAAIDPAVIVTLG 125 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 + F ++ + G+ + + +HP + P + L Sbjct: 126 RFSMGLFL--PGERISRIHGQPRYVQ----GRLIVPMIHPAAALHQPQNRPLLEADFRRL 179 Query: 255 KKALKN 260 L Sbjct: 180 PDILAE 185 >gi|315636217|ref|ZP_07891471.1| uracil-DNA glycosylase [Arcobacter butzleri JV22] gi|315479578|gb|EFU70257.1| uracil-DNA glycosylase [Arcobacter butzleri JV22] Length = 222 Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats. Identities = 43/189 (22%), Positives = 89/189 (47%), Gaps = 8/189 (4%) Query: 74 ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 + ELK+ + + C LC + + +M I P+ S++ G + G +G Sbjct: 40 PNDIKELKNSVEHCYLCELCKVRKNVLFGYGNINSKIMFICDEPTKSEDELGSFYVGNSG 99 Query: 134 NMLDKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192 +L KM++++ I + ++I+ + S+ + C +++QIELI PK+++ Sbjct: 100 ELLSKMIENVLNIKKEDVYITTLVKCKSLNGATNSS--FDTCNDYLLKQIELIKPKLIVS 157 Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 +G KT + + +Q GK N I +A P L++ P +KK+ ++ ++ Sbjct: 158 LGEKT-YSYLMKNGDNFFQIRGKMLNFN----SIALMAVYSPTFLLRNPSLKKDAYYDML 212 Query: 253 TLKKALKNL 261 +K ++ L Sbjct: 213 KIKSFMEEL 221 >gi|241666692|ref|YP_002984776.1| phage SPO1 DNA polymerase-related protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862149|gb|ACS59814.1| phage SPO1 DNA polymerase-related protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 213 Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats. Identities = 34/199 (17%), Positives = 76/199 (38%), Gaps = 17/199 (8%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 A S+ EL C L + + + ++++IG P D ++++G+PF G Sbjct: 16 ANADSIAELWHQAEDCTRCDLYRNATQIVFGEGSGKAEIVLIGEQPGDQEDLTGRPFVGP 75 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIEL 184 G +LD+ L+ + R + +++ + + E+ C + ++ + Sbjct: 76 AGRLLDRCLEEAGLDRQRCYVTNAVKHFKFTPRGKRRLHAKPNAGEIRRCAWWLGAELNI 135 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ----- 239 + PK+++ +G A+ T + P P L T+HP L++ Sbjct: 136 LQPKLVVTLGASALYALLGPKAKLTPERGHILHPTNHP----PVLVTIHPSYLLRIRNEA 191 Query: 240 -YPLIKKNTWHALITLKKA 257 +++ L + Sbjct: 192 DRDQQRRDFVSDLHKAAEF 210 >gi|163742352|ref|ZP_02149739.1| Uracil-DNA glycosylase superfamily protein [Phaeobacter gallaeciensis 2.10] gi|161384302|gb|EDQ08684.1| Uracil-DNA glycosylase superfamily protein [Phaeobacter gallaeciensis 2.10] Length = 481 Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 79/235 (33%), Gaps = 16/235 (6%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKA---CSLHELKSLLRSF 87 P A E + A+ QA EL + + S Sbjct: 233 PEAAAIPELIATAPARARAMAEAAPTLPPLRAARVQARLPEANPHWQGPAAELPAAINSC 292 Query: 88 HDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR 147 C L + + DLMI+G P D +++ G+PF G G + D++ + R Sbjct: 293 TLCPLYGPATQAVPGEGPTDADLMIVGEQPGDQEDLVGRPFVGPAGQLFDQLATEAGLPR 352 Query: 148 TQIHISMISPW-------HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF 200 +++ ++ + E+ C+ + +++ + PK++L +G Sbjct: 353 EAAYVTNAVKHFKFLPRGRKRLHQQPNGSEIRHCQVWLRAELDQVRPKLILALGATAAEA 412 Query: 201 FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL--IKKNTWHALIT 253 + Q G P L T+HP L++ P +++ L Sbjct: 413 LLG-SGKHILQRRGTI---ERRVDGTPVLITLHPSYLLRVPDRYLRERATEDLRA 463 >gi|161528564|ref|YP_001582390.1| phage SPO1 DNA polymerase-related protein [Nitrosopumilus maritimus SCM1] gi|160339865|gb|ABX12952.1| phage SPO1 DNA polymerase-related protein [Nitrosopumilus maritimus SCM1] Length = 196 Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 72/187 (38%), Gaps = 6/187 (3%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L +K + C L T +++ D++ +G P +++ +G+PF G G Sbjct: 2 NQLETIKQNVIKCTKCDLYKTRTNSVPGKGNFQSDVIFVGEAPGRNEDKNGEPFVGAAGK 61 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 L L+ + R ++I+ + PP NR + E + C+ + +I +I PKI+ +G Sbjct: 62 KLSAALEGAGVSREDVYITNVVKCRPPNNRVPNTNERDTCKEYLKNEILIIKPKIICVLG 121 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 N N + + GK T+HP I + + L Sbjct: 122 NTAFNSVLG--GSEITKFRGKL----VRKDNQLYFLTIHPAATIYNQELISTLNEDIKKL 175 Query: 255 KKALKNL 261 + L Sbjct: 176 FNLITEL 182 >gi|118463844|ref|YP_883243.1| uracil DNA glycosylase superfamily protein [Mycobacterium avium 104] gi|118165131|gb|ABK66028.1| uracil DNA glycosylase superfamily protein [Mycobacterium avium 104] Length = 221 Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 82/220 (37%), Gaps = 21/220 (9%) Query: 59 IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPS 118 + AD + + LK + C L + + T+ G +M++G P Sbjct: 2 TATSKAPGADRYLPEQRDIEALKHAAETCRGCSLFADATQTVFGNGHPGAPIMLVGEQPG 61 Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG--------NRNLSNIE 170 D ++ +G PF G G +L + L I + + ++ E Sbjct: 62 DQEDRAGAPFVGPAGRLLARALHDAGIDPGLTYQTNAVKHFKFTRKDGKRRIHQKPGRTE 121 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP--- 227 + CRP ++ +IE + P++++ +G + + Q G+ L +IP Sbjct: 122 IVACRPWLIAEIEAVHPRVIVCLGATAAQSLLGTSFRVSAQ-RGQPLKLPASPEVIPDVA 180 Query: 228 ----TLATVHPQELIQYPLIK-----KNTWHALITLKKAL 258 +ATVHP +++ + + L + + AL Sbjct: 181 PEPVLVATVHPSSVLRDRSERHDEVYRLFVDDLRSARSAL 220 >gi|241518598|ref|YP_002979226.1| phage SPO1 DNA polymerase-related protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863011|gb|ACS60675.1| phage SPO1 DNA polymerase-related protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 220 Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 78/219 (35%), Gaps = 19/219 (8%) Query: 57 RHIHSPLVQQADSIAQKA--CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIG 114 P I A L L + C L + T+ + ++++G Sbjct: 4 ASATRPTRLPPAFIEPHAEGKDLSALHGQAETCERCDLFKNATQTVFGEGSTDARVILVG 63 Query: 115 YTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLS 167 P D ++I+G+PF G G +LD+ L I R+ +++ + + Sbjct: 64 EQPGDKEDIAGRPFVGPAGRLLDECLHEAGIDRSLCYVTNAVKHFKFEQRGKRRIHSKPN 123 Query: 168 NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227 E++ C + +++ + P +++ +G T + SN+ + P Sbjct: 124 AGEIQRCAWWLGGELDFLRPSLVVALGATALYTLMGRSVGLTKER----SNILQAANATP 179 Query: 228 TLATVHPQELIQ------YPLIKKNTWHALITLKKALKN 260 L T+HP L++ ++ L + L + Sbjct: 180 LLVTIHPSYLLRIRDHDDRANEQRRFVDDLRLIHDYLSD 218 >gi|197123093|ref|YP_002135044.1| phage SPO1 DNA polymerase-related protein [Anaeromyxobacter sp. K] gi|196172942|gb|ACG73915.1| phage SPO1 DNA polymerase-related protein [Anaeromyxobacter sp. K] Length = 224 Score = 134 bits (338), Expect = 9e-30, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 76/215 (35%), Gaps = 17/215 (7%) Query: 58 HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117 P A + +L L+ C L T+ G +M++G P Sbjct: 2 PRRPPPGGTAAPLVPARATLPALRRAAAGCTACPLWERGTQTVFGAGPPGATVMLVGEQP 61 Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRNLSNIE 170 + ++ +G+PF G G +LD+ L + + R +++ ++ + E Sbjct: 62 GNDEDRAGEPFVGPAGRLLDRALAAAGLDRRDAYVTNAVKHFKWEPRGKRRIHQKPNAGE 121 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230 + C P + +I + P+ ++ +G + + G+ +A Sbjct: 122 VRACLPWLEAEIAAVRPRAVVCLGATAAQALLG-RGFRLTERRGQPVPSPLAEV---VIA 177 Query: 231 TVHPQELIQYP--LIKKNTW----HALITLKKALK 259 T+HP +++ P ++ L + L+ Sbjct: 178 TLHPSAVLRAPDDAARREALAGLVADLARVAALLR 212 >gi|126461677|ref|YP_001042791.1| phage SPO1 DNA polymerase-related protein [Rhodobacter sphaeroides ATCC 17029] gi|126103341|gb|ABN76019.1| phage SPO1 DNA polymerase-related protein [Rhodobacter sphaeroides ATCC 17029] Length = 485 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 40/241 (16%), Positives = 84/241 (34%), Gaps = 17/241 (7%) Query: 34 EATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLC 93 E E Q + A + + A S SL E K+ C L Sbjct: 248 ERAAEMQAAAPTEPPARTAAVARQRAAAAGGPPAASDGSAPGSLAEAKTAAEGCRRCGLW 307 Query: 94 STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHIS 153 + + + +M++G P D ++++G+PF G G + D+ + + R ++++ Sbjct: 308 ANATQVVFGEGPATARMMVVGEQPGDREDLAGRPFVGPAGQLFDEEAAAAGLDRGSVYVT 367 Query: 154 MISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206 ++ E+ CR + + +L+ P++++ +G Sbjct: 368 NAVKHFKFTPRGKRRIHQKPDAGEVTACRWWLDLERDLVRPRLIVAMGATALASLTG-SG 426 Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL------IKKNTWHALITLKKALKN 260 + G L P TVHP +++ P ++ L ++ L+ Sbjct: 427 AGILKRRGSLERL---DDGTPLFVTVHPSYILRLPDEAARAEERRRFRADLEEARQLLER 483 Query: 261 L 261 L Sbjct: 484 L 484 >gi|332701477|ref|ZP_08421565.1| phage SPO1 DNA polymerase-related protein [Desulfovibrio africanus str. Walvis Bay] gi|332551626|gb|EGJ48670.1| phage SPO1 DNA polymerase-related protein [Desulfovibrio africanus str. Walvis Bay] Length = 219 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 70/171 (40%), Gaps = 11/171 (6%) Query: 80 LKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKM 139 L C L + T+ LM++G P D ++ G+PF G G +LD+ Sbjct: 32 LVREAAHCTRCDLYKAATRTVFGEGPVEARLMLVGEIPGDMEDRRGRPFVGPAGRLLDRA 91 Query: 140 LQSIEIMRTQIHISMISPW-------HPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192 L+ + R+ ++++ +R S E+ C + R++ L+ P+ ++ Sbjct: 92 LEEAGVDRSTVYLTNSVKHFKFELTGRRRQHRAPSVSEINACHYWLDRELALVKPRTVVA 151 Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI 243 +G F + Q GK+++L + T+HP +++ P Sbjct: 152 LGGTAARAVFG-KPVRVLQVRGKFADLEP---GRQAMVTIHPSAILRMPEE 198 >gi|121533311|ref|ZP_01665139.1| phage SPO1 DNA polymerase-related protein [Thermosinus carboxydivorans Nor1] gi|121307870|gb|EAX48784.1| phage SPO1 DNA polymerase-related protein [Thermosinus carboxydivorans Nor1] Length = 231 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 88/191 (46%), Gaps = 11/191 (5%) Query: 78 HELKSLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 EL++ L + + C LC + T LM++G P ++ G P G +G +L Sbjct: 12 AELEAALLACNQCALCREGNRGPTSYNGTPDSPLMLVGEGPGGVEDEYGVPLVGPSGQLL 71 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC-RPIIMRQIELISPKILLFIGN 195 D+ L S+ I R +I+ + + P GNR + E ++C + +I L+ PKI++ +G+ Sbjct: 72 DRALASVGITRDRIYTTNVVKCRPRGNRTPTVEEGQVCASRWLDAEITLVKPKIIIALGS 131 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWHA 250 + + +A + ++ G+W IP +AT HP L++ K ++ Sbjct: 132 VALKYLYEPNA-RITKDRGRWFMTKY---GIPAIATYHPAYLLRLTGQDLVRAKWEVYYD 187 Query: 251 LITLKKALKNL 261 L + L L Sbjct: 188 LKAAVERLAEL 198 >gi|182680237|ref|YP_001834383.1| phage SPO1 DNA polymerase-related protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182636120|gb|ACB96894.1| phage SPO1 DNA polymerase-related protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 211 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 78/199 (39%), Gaps = 16/199 (8%) Query: 74 ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 SL L+ R+ C L + T+ + L+I+G P D +++ G PF G G Sbjct: 17 PKSLEALREAARTCQRCPLWKHATQTVFGEGPKDARLLIVGEQPGDKEDLQGHPFVGPAG 76 Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELIS 186 +LDK L + I R +++++ ++ + E++ CR + + L+ Sbjct: 77 LLLDKALGEVGIDRRRVYVTNAVKHFKFEPRGKRRMHKTPTTTEIKACRFWLEGEFALLE 136 Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ-----YP 241 PK++L +G + + + + G+ L T HP +++ Sbjct: 137 PKLVLALGATALHGLLGH-VARIGEMRGEPIPF---GDNAKLLVTTHPSAILRMKEPMRA 192 Query: 242 LIKKNTWHALITLKKALKN 260 + + L + L+ Sbjct: 193 QNYADFLNDLKRIPALLEE 211 >gi|254822543|ref|ZP_05227544.1| hypothetical protein MintA_21619 [Mycobacterium intracellulare ATCC 13950] Length = 219 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 81/219 (36%), Gaps = 19/219 (8%) Query: 59 IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPS 118 + AD + + L+S + H C L + T+ G +M++G P Sbjct: 2 TATAKAPGADRYLPEERDIDALRSAAETCHGCALFEDATQTVFGNGHPGAPIMLVGEQPG 61 Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG--------NRNLSNIE 170 D ++ +G+PF G G +L + L+ I + + ++ E Sbjct: 62 DQEDRAGEPFVGPAGRLLARALEDAGIDPVLTYQTNAVKHFKFTRKGGKRRIHQKPGRTE 121 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP--- 227 + CRP ++ +IE + P++++ +G + + G+ L I Sbjct: 122 VVACRPWLIAEIEAVQPEVIVCLGATAAQSLLGTTFRV-SEQRGRELKLPESVDIARTPE 180 Query: 228 --TLATVHPQELIQYPLIKKN-----TWHALITLKKALK 259 +ATVHP +++ +++ L + L Sbjct: 181 PIVVATVHPSSVLRDRSDRRDEVYQSFVDDLRIARSGLA 219 >gi|193084356|gb|ACF10013.1| phage SPO1 DNA polymerase-related protein [uncultured marine crenarchaeote SAT1000-49-D2] Length = 180 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 6/178 (3%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L ++ +++ C LC T + + + D++ IG P ++++ G+PF G G L Sbjct: 7 LEIIQEKVKTCEKCDLCITRKNAVPGKGNQNADIIFIGEAPGKNEDLHGEPFIGTAGKKL 66 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 D L++ + R ++I+ I PP NR +++E C + +I +I+PKI+ +GN Sbjct: 67 DDALKNAGLTRNSVYITNIVKCRPPKNRIPNDVEKSTCNEYLKAEIAIINPKIICLLGNT 126 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 ++ +N GK+ + T HP I + + + L Sbjct: 127 PYYSILG--GKEISKNHGKFISKDNRMY----FVTFHPAATIYNQKLVNVFKNDISKL 178 >gi|159903330|ref|YP_001550674.1| Uracil-DNA glycosylase [Prochlorococcus marinus str. MIT 9211] gi|159888506|gb|ABX08720.1| Uracil-DNA glycosylase [Prochlorococcus marinus str. MIT 9211] Length = 191 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 41/176 (23%), Positives = 72/176 (40%), Gaps = 11/176 (6%) Query: 90 CHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQ 149 C+ + LM++G P + + GKPF G++G +LD +L+ + I + Sbjct: 16 CNCLEPCSKVVVGRGNPSAHLMLVGEAPGAKEELLGKPFVGRSGKVLDNLLEVVGIDHQK 75 Query: 150 I-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQK 208 +I + PP NR + E+ P ++ QI+L+ P +++ G F K Sbjct: 76 DIYICNVMKSRPPNNRRPTRAEIAKHLPWLVHQIKLVKPFVIVLAGATALETFLEIKT-K 134 Query: 209 TYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK-----NTWHALITLKKALK 259 G W N I + HP L++ P K T L ++K ++ Sbjct: 135 ITVLRGTWQNW----RGIAVMPIFHPSYLLRNPSNAKGSPLELTRSDLFEVRKRME 186 >gi|157737025|ref|YP_001489708.1| hypothetical protein Abu_0774 [Arcobacter butzleri RM4018] gi|157698879|gb|ABV67039.1| conserved hypothetical protein [Arcobacter butzleri RM4018] Length = 222 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 43/189 (22%), Positives = 89/189 (47%), Gaps = 8/189 (4%) Query: 74 ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 + ELK+ + + C LC + + +M I P+ S++ G + G +G Sbjct: 40 PNDIKELKNSVEHCYLCELCKVRKNVLFGYGNINSKIMFICDEPTKSEDELGSFYVGNSG 99 Query: 134 NMLDKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192 +L KM++++ I + ++I+ + S+ + C +++QIELI PK+++ Sbjct: 100 ELLSKMIENVLNIKKEDVYITTLVKCKSLNGATNSS--FDTCNDYLLKQIELIKPKLIVS 157 Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 +G KT + + +Q GK N I +A P L++ P +KK+ ++ ++ Sbjct: 158 LGEKT-YSYLMKNGDNFFQIRGKMLNFN----SIALIAVYSPTFLLRNPSLKKDAYYDML 212 Query: 253 TLKKALKNL 261 +K ++ L Sbjct: 213 KIKSFMEEL 221 >gi|197104365|ref|YP_002129742.1| phage SPO1 DNA polymerase-related protein [Phenylobacterium zucineum HLK1] gi|196477785|gb|ACG77313.1| phage SPO1 DNA polymerase-related protein [Phenylobacterium zucineum HLK1] Length = 477 Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 38/222 (17%), Positives = 78/222 (35%), Gaps = 15/222 (6%) Query: 47 DSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTE 106 + +P I + + A Q +L E+ + ++ C L + + Sbjct: 256 QAPTEPDRRIVRAAARASRDAPYDGQPPATLEEVAAGVQVCRRCDLYRDATQGVPGEGPR 315 Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG---- 162 LM +G P D ++++G+PF G G +LDK L I R + ++ Sbjct: 316 QARLMFVGEQPGDQEDLAGRPFVGPAGGVLDKALAEAGIPRAETFVTNAVKHFKHEPRGK 375 Query: 163 ---NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 ++ E+ CR + + ++ P++++ +G F + + L Sbjct: 376 RRLHKTPDAGEVSACRWWLDAERRIVQPRVVVALGATAALAVFG-KPTPIGKFRQQAIQL 434 Query: 220 CTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + T HP L++ P + L +L Sbjct: 435 PDQAQG---VVTYHPSYLLRVPDAEAKA----KAYAMFLDDL 469 >gi|219849325|ref|YP_002463758.1| phage SPO1 DNA polymerase-related protein [Chloroflexus aggregans DSM 9485] gi|219543584|gb|ACL25322.1| phage SPO1 DNA polymerase-related protein [Chloroflexus aggregans DSM 9485] Length = 210 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 73/185 (39%), Gaps = 7/185 (3%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L + ++ C+L + +M IG P ++ G+PF G +G L Sbjct: 7 LFTIAEEVQRCTACNLHRGRTRAVPGEGPANARVMFIGEGPGYHEDRQGRPFVGPSGQFL 66 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP-IIMRQIELISPKILLFIGN 195 + +L + R +++I+ + PP NR+ E+ C +MRQI I P +++ +G Sbjct: 67 NDLLALAGLRRDEVYIANVVKCRPPQNRDPEPDEIATCTRLFLMRQIAAIDPIVIVTLGR 126 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 + F ++ + G+ ++ + +HP + P + L Sbjct: 127 FSMGLFL--PGERISRIHGQPRSVN----GRLIVPMIHPAAALHQPQNRPLLEEDFRRLP 180 Query: 256 KALKN 260 + + Sbjct: 181 AIIAD 185 >gi|168700619|ref|ZP_02732896.1| DNA polymerase, bacteriophage-type [Gemmata obscuriglobus UQM 2246] Length = 253 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 51/262 (19%), Positives = 92/262 (35%), Gaps = 22/262 (8%) Query: 2 TSKRILSQ-EQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60 S + +Q+ +GV + + R E + P + Sbjct: 1 MSDGPIDLVQQLRAHLHSLGAAGVLFAPRGEPLVIARPAPRAEVVPAEEVAPAEDPLETR 60 Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPSD 119 L L + + + C L ST L + T ++ +G P Sbjct: 61 RRA-------------LATLAAEVSNCDKCSELFSTRLRAVFGTGPLDPEVAFVGEAPGY 107 Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIM 179 ++ G+PF GK G +L +++ + ++ Q ++ I PP R + E CR I Sbjct: 108 EEDAQGEPFVGKGGQLLRRIIAACQLPSAQEYLLNIIKCRPPRTRPPTMAECGNCRDIFR 167 Query: 180 RQIELISPKILLFIGNKTKNFFFNN-DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238 RQ EL+ PK L+ +G A G+ +P + T HP ++ Sbjct: 168 RQFELVRPKYLVALGLTASRLLSGKVSATALGALRGQVHQY----RGVPLICTHHPNDID 223 Query: 239 QY--PLIKKNTWHALITLKKAL 258 +K+ TW + L + + Sbjct: 224 ADGTGRLKRETWDDMKLLLRTM 245 >gi|227819345|ref|YP_002823316.1| DNA-directed DNA polymerase [Sinorhizobium fredii NGR234] gi|227338344|gb|ACP22563.1| putative DNA-directed DNA polymerase protein [Sinorhizobium fredii NGR234] Length = 232 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 73/175 (41%), Gaps = 11/175 (6%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 +A S+ L+ C L + + ++++G P D ++++G+PF G Sbjct: 36 AEAPSIAALRKQAEGCERCDLYKNATQLVFGEGPGKARVVLVGEQPGDREDLAGRPFVGP 95 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIEL 184 G +LD+ L I R+ +++ + + E++ C + +++ Sbjct: 96 AGRILDECLHEAGIDRSSCYLTNAVKHFKFEQRGKRRLHSRPNAGEVQRCSWWLGAELDK 155 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 + PK+++ +G + A+ +N G +L + L T+HP L++ Sbjct: 156 LHPKVVVALGATALSSLLGRRARVM-KNRG---DLIPTPAGYSVLITIHPSYLLR 206 >gi|296272664|ref|YP_003655295.1| uracil-DNA glycosylase superfamily [Arcobacter nitrofigilis DSM 7299] gi|296096838|gb|ADG92788.1| Uracil-DNA glycosylase superfamily [Arcobacter nitrofigilis DSM 7299] Length = 222 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 37/189 (19%), Positives = 87/189 (46%), Gaps = 7/189 (3%) Query: 74 ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 + +L+ L+++ H C L + + + ++M + +P+ S++ + GK+G Sbjct: 40 PDDIKQLEELVKNCHLCQLSKYRENVLFGSGNINSNIMFLKESPTISEDEVDAFYVGKSG 99 Query: 134 NMLDKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192 +L M++ + ++ ++I+ I N + + C+ + +QIEL+ PK+L+ Sbjct: 100 ELLKNMIEKVLKVPCETVYITNIVKC-ISPNSEIKAEHVNNCKAYLDKQIELVKPKLLVI 158 Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 +G F +D + GK P++ + + T P L++ P K + L+ Sbjct: 159 LGESVYRHF-TSDNTAFSEIRGKV----IPNNDLDIICTYEPSFLLRNPSSKGEAYEDLL 213 Query: 253 TLKKALKNL 261 +K ++ + Sbjct: 214 KIKAIMEQM 222 >gi|254486783|ref|ZP_05099988.1| putative DNA polymerase related protein [Roseobacter sp. GAI101] gi|214043652|gb|EEB84290.1| putative DNA polymerase related protein [Roseobacter sp. GAI101] Length = 473 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 77/203 (37%), Gaps = 14/203 (6%) Query: 52 PITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLM 111 P + + + Q A + L + + + C L T+ + DLM Sbjct: 260 PPARMAQVQA---QLAAHHSAWDGPSDALPAAIAACTRCPLHCTATQAVVGEGPMDADLM 316 Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NR 164 I+G P D +++SG+PF G G + D++ + R++ +++ ++ Sbjct: 317 IVGEQPGDQEDLSGRPFVGPAGQLFDQIAVQAGLDRSRAYVTNAVKHFKFTPRGKKRIHQ 376 Query: 165 NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS 224 + E++ CR + ++ + PK++L +G + GK Sbjct: 377 RPNTSEIDHCRWWLDAEVAQVKPKLILGMGATAAEGLTGRRDAILAR-RGKVEEAP---D 432 Query: 225 IIPTLATVHPQELIQYPLIKKNT 247 P L T+HP L++ P Sbjct: 433 GTPVLLTLHPSYLLRLPDRAAKA 455 >gi|114328194|ref|YP_745351.1| uracil DNA glycosylase superfamily protein [Granulibacter bethesdensis CGDNIH1] gi|114316368|gb|ABI62428.1| uracil DNA glycosylase superfamily protein [Granulibacter bethesdensis CGDNIH1] Length = 488 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 39/236 (16%), Positives = 82/236 (34%), Gaps = 18/236 (7%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQ-KACSLHELKSLLRSFHD 89 P+ A E++ + P I + + +L E + Sbjct: 238 PDMLADAEARVQRMHQAGTTAPRPGAAAISARYRASMPVATEVSPETLDEARQAALQCRR 297 Query: 90 CHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQ 149 C LC + T+ G LMI+G P D +++ G+PF G G +L ++ + + + Sbjct: 298 CSLCEAATRTVWGEGDVGASLMIVGEQPGDREDLEGRPFVGPAGQVLRDLMGKVGMAAAE 357 Query: 150 IHISMISPW-------HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202 + ++ +++ E+E CR + ++ L+ P++ L +G Sbjct: 358 VWLTNAVKHFKFLPRGRHRLHQSPDRKEIEACRWWLDLELSLVRPRLTLALGASATFALT 417 Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL------IKKNTWHALI 252 + + G P L + HP +++ P ++ L Sbjct: 418 G-NRAAMTRRRGMV---EQGLHGGPVLISWHPSFILRLPNPQESEKARRELEQDLR 469 >gi|120404181|ref|YP_954010.1| phage SPO1 DNA polymerase--like protein [Mycobacterium vanbaalenii PYR-1] gi|119956999|gb|ABM14004.1| phage SPO1 DNA polymerase-related protein [Mycobacterium vanbaalenii PYR-1] Length = 217 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 82/216 (37%), Gaps = 20/216 (9%) Query: 64 VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123 + A + L L + +S C L + + + G +M++G P D +++ Sbjct: 3 IVGAAEFVPQTRELSTLAAAAQSCRGCDLFENASRAVFGSGPVGARMMLVGEQPGDREDV 62 Query: 124 SGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP---------GNRNLSNIEMEIC 174 +G+PF G G +LDK L + R ++++ ++ S E+ C Sbjct: 63 AGEPFVGPAGRLLDKALDEAGLPRAPVYLTNAVKHFKFVPAERGTRRIHKTPSRTEVVAC 122 Query: 175 RPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL-----CTPHSIIPTL 229 RP ++ +++ + P +++ +G N + T G+ +L + Sbjct: 123 RPWLIAEMQAVEPAVVVLLGATAAKSLLGNAFRLTAH-RGEVLSLPAETKPVGGRDAKVV 181 Query: 230 ATVHPQELIQYPLIKKN-----TWHALITLKKALKN 260 TVHP +++ P + L + L Sbjct: 182 VTVHPSSVLRGPSQAREESFRSLVSDLRFAGELLDA 217 >gi|254477893|ref|ZP_05091278.1| putative DNA polymerase related protein [Ruegeria sp. R11] gi|214028478|gb|EEB69314.1| putative DNA polymerase related protein [Ruegeria sp. R11] Length = 474 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 71/191 (37%), Gaps = 13/191 (6%) Query: 79 ELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDK 138 +L S + + C L + + + +LM +G P D +++ G+PF G G + D Sbjct: 284 DLPSAISACTRCPLHKPATQAVAGEGPQSAELMFVGEQPGDHEDLVGRPFVGPAGQLFDL 343 Query: 139 MLQSIEIMRTQIHISMISPW-------HPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191 ++ + R + ++ ++ S E+ C P + +I + P++++ Sbjct: 344 LMAEAGLKREEAFVTNAVKHFKFLPRGRKRLHQKPSQDEIATCNPWLRAEIAQVQPRLIV 403 Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKKNTWH 249 +G + G+ +P L T+HP L++ K Sbjct: 404 AMGASAAQALLG-SGKAITDRRGRV---EWRADGLPVLITLHPSFLLRLSDAAAVKQARA 459 Query: 250 ALITLKKALKN 260 ++ + + Sbjct: 460 DMLADLRRAAD 470 >gi|221638650|ref|YP_002524912.1| Phage SPO1 DNA polymerase-related protein [Rhodobacter sphaeroides KD131] gi|221159431|gb|ACM00411.1| Phage SPO1 DNA polymerase-related protein [Rhodobacter sphaeroides KD131] Length = 485 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 40/241 (16%), Positives = 83/241 (34%), Gaps = 17/241 (7%) Query: 34 EATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLC 93 E E Q + A + + A SL E K+ C L Sbjct: 248 ERAAEMQAAALTEPPARTAAVARQRAAAAGGPVAAGDGSAPGSLAEAKTAAEGCRRCGLW 307 Query: 94 STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHIS 153 + + + +MI+G P D ++++G+PF G G + D+ + + R ++++ Sbjct: 308 ANATQVVFGEGPATARMMIVGEQPGDREDLAGRPFVGPAGQLFDEEAAAAGLDRQAVYVT 367 Query: 154 MISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206 ++ E+ CR + + +L+ P++++ +G Sbjct: 368 NAVKHFKFAPRGKRRIHQKPDAGEVTACRWWLDLERDLVRPRLIVAMGATALASLTG-SG 426 Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL------IKKNTWHALITLKKALKN 260 + G L P TVHP +++ P ++ L ++ L+ Sbjct: 427 AGILKRRGSVERL---DDGTPLFVTVHPSYILRLPDEAARAEERRRFRADLEAARQLLER 483 Query: 261 L 261 L Sbjct: 484 L 484 >gi|307328601|ref|ZP_07607774.1| phage SPO1 DNA polymerase-related protein [Streptomyces violaceusniger Tu 4113] gi|306885713|gb|EFN16726.1| phage SPO1 DNA polymerase-related protein [Streptomyces violaceusniger Tu 4113] Length = 219 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 74/217 (34%), Gaps = 17/217 (7%) Query: 57 RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYT 116 A + A L L+ C L + T+ M++G Sbjct: 4 TKSPEDAYTAAPFVPDGA-DLGALREAAAGCRGCPLHRDATQTVFGAGDPDARAMLVGEQ 62 Query: 117 PSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSN-------- 168 P D ++ GKPF G G +LD+ L I + +I+ Sbjct: 63 PGDQEDRQGKPFVGPAGKVLDRALDEAGIDPDETYITNAVKHFKFTYVPERGKRRIHKPP 122 Query: 169 --IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS-NLCTPHSI 225 E+ C P + ++ELI P++++ +G + + T Q + + P Sbjct: 123 SLRELAACGPWLAAEVELIGPEVIVALGATAGKALLGSSFRVTQQRGTRLEGDASGPARG 182 Query: 226 IPTLATVHPQELIQYPLIKKNTWH----ALITLKKAL 258 + T+HP +++ ++ + L +AL Sbjct: 183 ALIVPTIHPSAVLRA-DDREAAYEGLVADLRVAAEAL 218 >gi|302553346|ref|ZP_07305688.1| uracil DNA glycosylase superfamily protein [Streptomyces viridochromogenes DSM 40736] gi|302470964|gb|EFL34057.1| uracil DNA glycosylase superfamily protein [Streptomyces viridochromogenes DSM 40736] Length = 216 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 77/216 (35%), Gaps = 13/216 (6%) Query: 56 IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115 +R S A+ L L+ C L + T+ + +M++G Sbjct: 2 VRAQASEDAYTAEPFVPGGGGLSALRRAAAECRGCPLHRDATQTVFGSGDADARVMLVGE 61 Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG---------NRNL 166 P D ++ G+PF G G +LD+ L+ I + +++ ++ Sbjct: 62 QPGDQEDRQGEPFVGPAGRVLDRALEEAGIDPAEAYVTNAVKHFKFTQAEPRKRRIHKAP 121 Query: 167 SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII 226 S EM C P + ++ ++ P++++ +G + + Q G Sbjct: 122 SLREMTACGPWLAAELAVVEPELIVVLGATAGKALLGSSFRV-TQVRGTVLEEEIHGRAE 180 Query: 227 PTLATVHPQELIQYPLIKKNTW---HALITLKKALK 259 + TVHP +++ + L +AL+ Sbjct: 181 RLVPTVHPSSVLRADDREAAYRGLVSDLRVAAQALR 216 >gi|300114529|ref|YP_003761104.1| phage SPO1 DNA polymerase-like protein [Nitrosococcus watsonii C-113] gi|299540466|gb|ADJ28783.1| phage SPO1 DNA polymerase-related protein [Nitrosococcus watsonii C-113] Length = 189 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 55/193 (28%), Positives = 92/193 (47%), Gaps = 6/193 (3%) Query: 68 DSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127 D + +KA +LHEL + ++ + +MIIG P + +G+P Sbjct: 2 DDLLKKAATLHELAQYCNRYLGPNVVKGEK-LVFGEGPSSAKIMIIGEAPGVQEAKTGQP 60 Query: 128 FSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP 187 F G +G +L K+L I + R QI+IS I HPPGNR E++ P ++RQIEL+ P Sbjct: 61 FVGSSGQLLTKLLHQIGLKREQIYISNILKTHPPGNRKPHRSEIKRELPFLLRQIELLQP 120 Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247 ++L+ +G + +A K + G+W + +PT T HP ++ K Sbjct: 121 QLLVLLGATALQALLDPNA-KITKLRGQWLEI----KNLPTFVTYHPAAALRDETKKAAL 175 Query: 248 WHALITLKKALKN 260 +L+ L++ Sbjct: 176 AQDFASLQGYLES 188 >gi|241205676|ref|YP_002976772.1| phage SPO1 DNA polymerase-related protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859566|gb|ACS57233.1| phage SPO1 DNA polymerase-related protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 484 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 96/237 (40%), Gaps = 17/237 (7%) Query: 35 ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94 A+ ES+ + + A Q + + A +L L + + C L + Sbjct: 248 ASAESKVRAMAAREATQSLPFHDRLQEAARSIPAEPEAPAGTLEALGAEAAACTRCPLHA 307 Query: 95 TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154 + T+ ++M +G P D ++ISG+PF G G +LD+++ I R+ ++++ Sbjct: 308 KATQTVFGEGPRDAEVMFVGEQPGDQEDISGRPFVGPAGRLLDQVISEAGIDRSTLYVTN 367 Query: 155 ISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207 ++ + E++ CR + ++ LI PK+++ +G + + + Sbjct: 368 AVKHFKYEPRGKRRIHQKPNMGEVKHCRWWLNLEMALIKPKLVVAMGATALSALTDTKQR 427 Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK------KNTWHALITLKKAL 258 GK + + TVHP L++ P + ++T+++ + Sbjct: 428 LQ-DVRGKAIAIDERRT---LFVTVHPSYLLRIPDERLKAEELARFREDMLTVQRLM 480 >gi|119898540|ref|YP_933753.1| putative DNA polymerase related protein [Azoarcus sp. BH72] gi|119670953|emb|CAL94866.1| putative DNA polymerase related protein [Azoarcus sp. BH72] Length = 216 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 76/209 (36%), Gaps = 18/209 (8%) Query: 59 IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPS 118 + A Q +L EL++ + C L + T+ + +M++G P Sbjct: 2 PPAQPKPTAAPFVQPDATLAELRAAAGACTGCDLYRDATQTVFGEGPDDAPVMLVGEQPG 61 Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM------ISPWHPPGNRNLSNI--E 170 D+++ G PF G G +LD+ L I R++ +++ + + E Sbjct: 62 DAEDRQGHPFVGPAGKLLDRALTDAGIDRSRSYVTNAVKHFKWIFTRGHKRLHQTPRTVE 121 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230 ++ C P + +I + P++L+ +G + G +A Sbjct: 122 VQACAPWLEAEIARVKPQVLILLGATAAKSLLG-SGFRVTAQRGVPQPSPLAP---RVVA 177 Query: 231 TVHPQELIQ--YPLIKKNTW----HALIT 253 T+HP L++ ++ + L Sbjct: 178 TIHPSALLRMANAEQRERAYAAFVADLRA 206 >gi|307721220|ref|YP_003892360.1| Uracil-DNA glycosylase superfamily [Sulfurimonas autotrophica DSM 16294] gi|306979313|gb|ADN09348.1| Uracil-DNA glycosylase superfamily [Sulfurimonas autotrophica DSM 16294] Length = 223 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 82/190 (43%), Gaps = 7/190 (3%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 +K +L L + S H C L + ++ ++ L+II Y+ S + + S ++G+ Sbjct: 40 EKPNTLEALAQNIASCHLCDLSKSRTQSMSGYGSKDAKLVIIDYSVSQAQDSSNSYYAGR 99 Query: 132 TGNMLDKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 +G L M++ + + I+++ P + S E C+ + Q++ I PK++ Sbjct: 100 SGETLKNMIEKVLHLSIDDIYLTHAVKCKPLQSNKPSPSEYNSCKNYLFSQLDFIKPKVI 159 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 + +G + G + + HPQ L++ P +KK T + Sbjct: 160 VTLGEDAYTHITGDT--NFENVRGHVIDY----KEYKLIPIYHPQYLLRNPHLKKITLND 213 Query: 251 LITLKKALKN 260 L T+K L++ Sbjct: 214 LKTIKSCLQD 223 >gi|78777161|ref|YP_393476.1| uracil-DNA glycosylase superfamily protein [Sulfurimonas denitrificans DSM 1251] gi|78497701|gb|ABB44241.1| Uracil-DNA glycosylase superfamily [Sulfurimonas denitrificans DSM 1251] Length = 219 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 84/188 (44%), Gaps = 6/188 (3%) Query: 73 KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 K +++EL + + + C L + ++ D+MII Y+ S ++ + + G++ Sbjct: 37 KPLTINELSKEVSTCYLCDLSKSRTQSMSGYGNSNADVMIIDYSVSLGEDNTNSYYCGRS 96 Query: 133 GNMLDKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191 G++L M++++ E+ ++ + P ++ S E + C+ + QIE + PK+++ Sbjct: 97 GDILKNMIENVLELKIEDVYFTHAIKCKPLNSKTPSESEWDSCKNYLFSQIEFVKPKVVV 156 Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 +G ++ G + + HP L++ P KK ++ L Sbjct: 157 TLGKDA-YAKVTSENDNFQNVRGHVIDF----KSYKLVPIYHPNYLLRNPDDKKIAFNDL 211 Query: 252 ITLKKALK 259 T+K LK Sbjct: 212 KTIKSLLK 219 >gi|222102769|ref|YP_002539808.1| hypothetical protein Avi_7466 [Agrobacterium vitis S4] gi|221739370|gb|ACM40103.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 492 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 39/235 (16%), Positives = 94/235 (40%), Gaps = 14/235 (5%) Query: 35 ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94 A E++ + + A +P+ + + + +A ++ L+ R + C L Sbjct: 259 AGAEAKLIDMAQRQASEPLPFHHRLQDAAARVPAAPVAEADTIDALRQEARRCNRCDLSC 318 Query: 95 TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154 + T+ +M++G P D ++++G+PF G G + D+ L + R ++++ Sbjct: 319 RATQTVFGEGPVDAKIMVVGEQPGDQEDLAGRPFVGPAGRVFDEALAQAGMDRRALYVTN 378 Query: 155 ISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207 ++ + E++ CR + ++IE++ PK+++ +G + Sbjct: 379 AVKHFKYEPRGKRRIHQRPNIAEVQQCRWWLTQEIEMVKPKLIVAMGAIALFS-LTDRKD 437 Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTWHALITLKKALKNL 261 + + TVHP L++ P K+N L ++ + + Sbjct: 438 RLEDVRSRP---IVMDDTRHLFVTVHPSYLLRIPDEIKRN--EELARFREDISQI 487 >gi|300787076|ref|YP_003767367.1| uracil-DNA glycosylase [Amycolatopsis mediterranei U32] gi|299796590|gb|ADJ46965.1| uracil-DNA glycosylase [Amycolatopsis mediterranei U32] Length = 210 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 76/197 (38%), Gaps = 15/197 (7%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 L L+S C L + T+ T ++++G P D ++++G+PF G G + Sbjct: 14 DLDRLRSAASGCQACPLYQDATQTVFGEGTARAKVLVVGEQPGDKEDLAGEPFVGPAGKL 73 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPG---------NRNLSNIEMEICRPIIMRQIELIS 186 LD+ + R ++++ ++ E+ CRP ++ ++ + Sbjct: 74 LDRAFEEAGFDRRSLYVTNAVKHFKFKRDERGKRRIHQKPGRTEVVACRPWLLAELRSVR 133 Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII--PTLATVHPQELIQYPLIK 244 P+++L +G + T G+ + + +ATVHP +++ P Sbjct: 134 PELVLLLGATAAQSLLGPKFRLTAH-RGEPLEPPEELAGLVPAAMATVHPSAVLRAPDRD 192 Query: 245 ---KNTWHALITLKKAL 258 + L K L Sbjct: 193 EAYASFVADLQAAAKLL 209 >gi|86360506|ref|YP_472394.1| DNA-directed DNA polymerase protein [Rhizobium etli CFN 42] gi|86284608|gb|ABC93667.1| probable DNA-directed DNA polymerase protein [Rhizobium etli CFN 42] Length = 213 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 73/183 (39%), Gaps = 12/183 (6%) Query: 64 VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123 A +A A S+ EL+ C L + + +++++G P D ++I Sbjct: 9 PALALEVAD-AESIAELRHQAEDCTRCDLYRNATQIVFGEGPGKAEIVLVGEQPGDREDI 67 Query: 124 SGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRP 176 +G+PF G G++LD L + R + +++ + + E+ C Sbjct: 68 TGRPFVGPAGHLLDLCLNEAGLDRQRCYVTNAVKHFKFTPRGKRRLHAKPNAGEIRRCAW 127 Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236 + ++ ++ PK+++ +G A+ G P + P L T+HP Sbjct: 128 WLGAELNILQPKLVVALGASALYALLGPKAKL-TPERGHILQ---PANHPPVLVTIHPSY 183 Query: 237 LIQ 239 L++ Sbjct: 184 LLR 186 >gi|55379408|ref|YP_137258.1| uracil DNA glycosylase superfamily protein [Haloarcula marismortui ATCC 43049] gi|55232133|gb|AAV47552.1| uracil DNA glycosylase superfamily protein [Haloarcula marismortui ATCC 43049] Length = 195 Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 2/172 (1%) Query: 87 FHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI 145 C LC + + DL+ +G P +++ G+PF G++G++LD L+ + Sbjct: 12 CERCDDLCGSRSRIVNGVGPADADLLFVGEAPGANEDEQGEPFVGRSGDVLDAGLRDAGL 71 Query: 146 MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 R + I+ PP NR+ N E+ CR + +I+ + P++++ +G D Sbjct: 72 DRGDVRITNCVRCRPPDNRDPRNGELANCRDYLETEIDRVDPEVVVTLGKVPAEHLLERD 131 Query: 206 AQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKA 257 T + G ++ L +VHP + P K+ AL T + Sbjct: 132 VAVTGEA-GDVFDVAIAGQPRRVLVSVHPAATLYDPSQKETFEAALTTAAEF 182 >gi|114705234|ref|ZP_01438142.1| Uracil-DNA glycosylase:Phage SPO1 DNA polymerase-related protein [Fulvimarina pelagi HTCC2506] gi|114540019|gb|EAU43139.1| Uracil-DNA glycosylase:Phage SPO1 DNA polymerase-related protein [Fulvimarina pelagi HTCC2506] Length = 501 Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 43/257 (16%), Positives = 95/257 (36%), Gaps = 21/257 (8%) Query: 22 SGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLV----QQADSIAQKACSL 77 +G A + + + + + + P++ +A++ + ++ Sbjct: 245 AGAEAAQRRMIETAPSLPSLRHEKMTERREAVMGLDSADEPMLGLDGDEANTGSNLPKTI 304 Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 + + S C L + T+ E ++ +G P D ++I+G+PF G G + D Sbjct: 305 EDARRAAASCQACPLWEPATQTVFGKGPEDAPVIFVGEQPGDQEDIAGEPFVGPAGKVFD 364 Query: 138 KMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKIL 190 + L S + R Q +++ + + E++ CR + + EL+ PK++ Sbjct: 365 EALLSAGVDRKQAYVTNAVKHFKFTPRGKRRIHAKPNMGEIKTCRWWLDLERELVKPKLI 424 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI------K 244 + +G + K NL I L TVHP +++ P + Sbjct: 425 VALGATAAQAVLG-KTVTIRDSRSKLINLT---DEIRFLVTVHPSYILRLPDAAAQERER 480 Query: 245 KNTWHALITLKKALKNL 261 + + + K + L Sbjct: 481 QAFRADMGLVLKTVPEL 497 >gi|327539936|gb|EGF26537.1| Uracil DNA glycosylase superfamily protein [Rhodopirellula baltica WH47] Length = 496 Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 81/206 (39%), Gaps = 17/206 (8%) Query: 69 SIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128 S + + S+ L+ C L + T+ L+++G P D ++++G+PF Sbjct: 294 STGESSQSIARLREAAAVCQGCDLHGPATQTVFGVGNPNAKLVLVGEQPGDREDLAGEPF 353 Query: 129 SGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQ 181 G G +L + L + + +++I+ + + E+ CRP + + Sbjct: 354 VGPAGQLLRETLNDVGLDPAELYITNSVKHFKFKPTGKRRLHVKPAAREVAACRPWLEAE 413 Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241 +++I PK+++ +G + ++ G+ T+AT HP +++ P Sbjct: 414 LDVIRPKMVVALGATAAGVVLGP-GFRLLKSRGQVQR---SDHAKWTIATYHPSAILRVP 469 Query: 242 LI------KKNTWHALITLKKALKNL 261 ++ L + + L Sbjct: 470 NEATRETMRQAFLEDLHFAAEHYRML 495 >gi|126730048|ref|ZP_01745860.1| Uracil-DNA glycosylase superfamily protein [Sagittula stellata E-37] gi|126709428|gb|EBA08482.1| Uracil-DNA glycosylase superfamily protein [Sagittula stellata E-37] Length = 488 Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 92/245 (37%), Gaps = 20/245 (8%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLH---ELKSLLRSF 87 P + E + + +A+ A++A L + L+S Sbjct: 233 PEAQLIPELLAQADARATAMAADAPTLAPARAAPILDRLRAEQAAKLDTQDAFLTALKSC 292 Query: 88 HDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR 147 C L ++ + E LM +G P D+++++G+PF+G G M DK LQ I R Sbjct: 293 RRCPLWESATQPVAGEGPEDAALMFVGEQPGDTEDLTGRPFTGPAGQMFDKALQVNGIRR 352 Query: 148 TQIHISMIS---PWHPPG----NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF 200 + ++ + P G ++N E+ C+ + +I+ ++P++++ +G Sbjct: 353 QEAFVTNAVKHFKFRPRGKRRLHQNPDRDEIAHCKWWLDLEIQRVAPRLIVVMGGTALQS 412 Query: 201 FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH------ALITL 254 + + G+ P L TVHP +++ P + L Sbjct: 413 LTGSREGL-LKRRGR---FEHTPEDTPILVTVHPSYILRLPDERLRAEETARFLADLALA 468 Query: 255 KKALK 259 + L Sbjct: 469 ARWLA 473 >gi|146278297|ref|YP_001168456.1| phage SPO1 DNA polymerase-related protein [Rhodobacter sphaeroides ATCC 17025] gi|145556538|gb|ABP71151.1| phage SPO1 DNA polymerase-related protein [Rhodobacter sphaeroides ATCC 17025] Length = 485 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 35/237 (14%), Positives = 83/237 (35%), Gaps = 13/237 (5%) Query: 21 DSG-VYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHE 79 ++G + + A + + R + + + A L + Sbjct: 235 EAGLIPDLIRGAAGRAAAMQAAAPTEPPARTAAMARQREAAAGGSARRAGAGEPAA-LPQ 293 Query: 80 LKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKM 139 K+ + C L + + + +M++G P D ++++G+PF G G +LD+ Sbjct: 294 AKAEAEACRRCGLWAHATQVVFGEGPPRARMMMVGEQPGDCEDLAGRPFVGPAGQLLDEE 353 Query: 140 LQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLF 192 + + R+ ++++ ++ E+ CR + + +L+ P++++ Sbjct: 354 ATAAGLDRSTLYVTNAVKHFKFSARGKRRIHQKPDAGEVTACRWWLDLERDLVRPRLIVA 413 Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249 +G + G L P TVHP +++ P T Sbjct: 414 MGATALASLTG-TGAGILRRRGTVERLE---DGTPVFVTVHPSYILRLPDAAAQTEE 466 >gi|218673831|ref|ZP_03523500.1| probable DNA-directed DNA polymerase protein [Rhizobium etli GR56] Length = 213 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 74/182 (40%), Gaps = 11/182 (6%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 A S+ +L+ C L + + ++ +++++G P D ++I+G+PF G Sbjct: 16 ADADSIAKLRHQAEGCTRCDLYRNATQIVFGEGSDKAEIVLVGEQPGDREDIAGRPFVGP 75 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIEL 184 G +LD L+ + R + +++ + + E+ C + ++ + Sbjct: 76 AGRLLDHCLEEAGLDRGRCYVTNAVKHFKFTPRGKRRLHAKPNAGEIRRCAWWLGAELNI 135 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK 244 + PK+++ +G A+ G P + P L T+HP L++ K Sbjct: 136 LQPKLVVALGASALYALLGPKAKL-TPERGHILQ---PRNHPPVLVTIHPSFLLRIRDEK 191 Query: 245 KN 246 + Sbjct: 192 EK 193 >gi|83943534|ref|ZP_00955993.1| putative uracil-DNA glycosylase [Sulfitobacter sp. EE-36] gi|83845766|gb|EAP83644.1| putative uracil-DNA glycosylase [Sulfitobacter sp. EE-36] Length = 473 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 68/179 (37%), Gaps = 13/179 (7%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 L + + C L + + DLMI+G P D +++SG+PF G G + D Sbjct: 283 DALAKDIAACTRCPLHCNATQAVPGEGPMDADLMIVGEQPGDQEDLSGRPFVGPAGQLFD 342 Query: 138 KMLQSIEIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 + + R + ++ ++ + E++ CR + +I + PK++ Sbjct: 343 HIAGRAGLQRDKAFVTNAVKHFKFTPRGKRRMHQRPNASEIQHCRWWLDAEIAQVKPKLI 402 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKKNT 247 L +G T + G + P L T+HP L++ P K + Sbjct: 403 LGMGATAAEGLTGRRDTITAR-RGTVEQTPS---GTPVLLTLHPSYLLRLPDPQAKADA 457 >gi|58039251|ref|YP_191215.1| DNA polymerase related protein [Gluconobacter oxydans 621H] gi|58001665|gb|AAW60559.1| DNA polymerase related protein [Gluconobacter oxydans 621H] Length = 499 Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 85/216 (39%), Gaps = 8/216 (3%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P A E++ + + + + A+ + A +L +L + +R+ C Sbjct: 255 PQLVAGAEARVRTMAEQELQPAPAFHERLRAREQLPAEPMPDVAENLEDLAAQVRTCTAC 314 Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150 L ++ + +M++G P D ++++G+PF G G +L + L + R + Sbjct: 315 PLHCSATQAVVGEGPADARIMVVGEQPGDQEDLAGRPFVGPAGQLLHEALGEAGVDRGAL 374 Query: 151 HISMISPW-------HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 +++ ++N + CRP + ++I LI PK+++ +G + Sbjct: 375 YLTNAVKHFRFRLQGRRRIHQNPDAGHVAACRPWLEQEIALIRPKLIVSLGATALRA-LD 433 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 G + + + LA HP L++ Sbjct: 434 GPGMAMSDVRGTSWTVGRGENAVRRLALAHPSWLLR 469 >gi|21222880|ref|NP_628659.1| DNA polymerase-like protein [Streptomyces coelicolor A3(2)] gi|256786009|ref|ZP_05524440.1| DNA polymerase related protein [Streptomyces lividans TK24] gi|289769904|ref|ZP_06529282.1| uracil DNA glycosylase superfamily protein [Streptomyces lividans TK24] gi|7242712|emb|CAB77286.1| putative DNA polymerase related protein [Streptomyces coelicolor A3(2)] gi|289700103|gb|EFD67532.1| uracil DNA glycosylase superfamily protein [Streptomyces lividans TK24] Length = 212 Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 67/195 (34%), Gaps = 13/195 (6%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L L++ C L + T+ +M++G P D ++ GKPF G G++L Sbjct: 19 LPALRAAAAECRGCPLHRDATQTVFGAGKASARVMLVGEQPGDQEDRQGKPFVGPAGHLL 78 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSN---------IEMEICRPIIMRQIELISP 187 D+ L + +++ E C P + +++ + P Sbjct: 79 DRALAEAGLDPADAYVTNAVKHFKFTRAEPRKRRIHKAPTLRETAACGPWLAAELDRVEP 138 Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK--- 244 ++++ +G + + + G + TVHP +++ + Sbjct: 139 ELIVVLGATAGKALLGSSFRV-TRVRGTVLEEEIHGRPQRLVPTVHPSAVLRADDREAAY 197 Query: 245 KNTWHALITLKKALK 259 + L +AL Sbjct: 198 RGLLSDLEVAARALA 212 >gi|220917884|ref|YP_002493188.1| phage SPO1 DNA polymerase-related protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219955738|gb|ACL66122.1| phage SPO1 DNA polymerase-related protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 224 Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 76/213 (35%), Gaps = 13/213 (6%) Query: 58 HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117 +P A + +L L+ C L T+ +M++G P Sbjct: 2 PRRAPPGGTAAPLVPARATLPALRRAAAGCTACPLWERGTQTVFGAGRTRATVMLVGEQP 61 Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRNLSNIE 170 + ++ +G+PF G G +LD+ L + + R +++ ++ + E Sbjct: 62 GNDEDRAGEPFVGPAGRLLDRALAAAGLDRRDAYVTNAVKHFKWEPRGKRRIHQKPNAAE 121 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230 + C P + +I + P+ L+ +G + + G+ +A Sbjct: 122 VRACLPWLEAEIAAVRPRALVCLGATAAQALLG-RGFRLTERRGQPVPSPLAEV---VIA 177 Query: 231 TVHPQELIQYP--LIKKNTWHALITLKKALKNL 261 T+HP +++ P ++ L+ + L Sbjct: 178 TLHPSAVLRAPDDAARREALAGLVADLARVAEL 210 >gi|254457996|ref|ZP_05071423.1| uracil-DNA glycosylase superfamily protein [Campylobacterales bacterium GD 1] gi|207085389|gb|EDZ62674.1| uracil-DNA glycosylase superfamily protein [Campylobacterales bacterium GD 1] Length = 218 Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats. Identities = 41/188 (21%), Positives = 85/188 (45%), Gaps = 6/188 (3%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 ++ +L+EL + S H C L + ++ +LMI+ ++ S SD+ + +SG+ Sbjct: 36 EEPKTLNELSQNISSCHLCDLSKSRQQSMSGYGNPNAELMIVDFSVSMSDDSNNGYYSGR 95 Query: 132 TGNMLDKMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 +G L M++ I + ++ + P + S E + C+ + QI+ + PK++ Sbjct: 96 SGESLTNMIEKVIGLKTDDVYFTHAIKCKPLNSNVPSASEWDSCKSYLFTQIDFVKPKVI 155 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 + +G + F ++ G + + HPQ L++ P +K+ T + Sbjct: 156 VTLGEEA-YFKLTSEESDFQNVRGHVIDF----KKYKLIPIYHPQFLLRNPELKRITLND 210 Query: 251 LITLKKAL 258 L T+K L Sbjct: 211 LKTIKSCL 218 >gi|32472802|ref|NP_865796.1| DNA polymerase related protein [Rhodopirellula baltica SH 1] gi|32444039|emb|CAD73481.1| putative DNA polymerase related protein [Rhodopirellula baltica SH 1] Length = 496 Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 80/206 (38%), Gaps = 17/206 (8%) Query: 69 SIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128 S + + S+ L+ C L + T+ L+++G P D ++++G+PF Sbjct: 294 STGESSQSIARLREAAAVCQGCDLHGPATQTVFGVGNPNAKLVLVGEQPGDREDLAGEPF 353 Query: 129 SGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQ 181 G G +L + L + + +++I+ + + E+ CRP + + Sbjct: 354 VGPAGQLLRETLNDVGLDPAELYITNSVKHFKFKPTGKRRLHVKPAAREVAACRPWLEAE 413 Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241 +++I PK+++ +G + ++ G+ I AT HP +++ P Sbjct: 414 LDVIRPKMVVALGATAAGVLLGP-GFRLLKSRGQVQRSDHAKWTI---ATYHPSAILRVP 469 Query: 242 LI------KKNTWHALITLKKALKNL 261 ++ L + + L Sbjct: 470 NEATRETMRQAFLDDLHFAAEHYRML 495 >gi|296116415|ref|ZP_06835029.1| Uracil-DNA glycosylase superfamily protein [Gluconacetobacter hansenii ATCC 23769] gi|295977008|gb|EFG83772.1| Uracil-DNA glycosylase superfamily protein [Gluconacetobacter hansenii ATCC 23769] Length = 408 Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats. Identities = 41/255 (16%), Positives = 89/255 (34%), Gaps = 29/255 (11%) Query: 18 FYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSI-AQKACS 76 ++ G E + ++ A + SP + A+ + ++ + Sbjct: 167 WHVQMG------ERVMRWDGTTLHPGTPLEGA-----DPASFPSPALPLAEGMDIERITA 215 Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L + RS C + + T+ T LM +G P D ++++G+PF G G + Sbjct: 216 LPAVAEAARSCLTCAMAHHATQTVFGEGTTTASLMFVGEQPGDQEDLAGRPFVGPAGQLF 275 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKI 189 D+ L + I R ++++ ++ E+ C P + + ++ P++ Sbjct: 276 DRALHEVGIARDDVYVTNTVKHFKFFNRNGRRIHQKAGMEEIRACAPWLHAERRMVRPRL 335 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK---- 245 L+ +G + + + + L L TVHP L++ P Sbjct: 336 LVMLGATAASAILQ-RSVVIGRERSRPITLDDGTCG---LVTVHPSFLLRQPTEDARSRE 391 Query: 246 --NTWHALITLKKAL 258 L + + Sbjct: 392 YLRFIEDLRLARSLI 406 >gi|239834976|ref|ZP_04683304.1| Uracil-DNA glycosylase superfamily [Ochrobactrum intermedium LMG 3301] gi|239823039|gb|EEQ94608.1| Uracil-DNA glycosylase superfamily [Ochrobactrum intermedium LMG 3301] Length = 477 Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats. Identities = 40/239 (16%), Positives = 88/239 (36%), Gaps = 17/239 (7%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P+ ES+ + + P I + + ++ E ++ C Sbjct: 238 PDMLRDAESRVERMRAAAETSPAAGAVAISTRYRAAMPQTPEFPQTMVEARAAAGHCRRC 297 Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150 LC + T+ E +LMI+G P D +++ G+PF G G++L + + + Q Sbjct: 298 GLCEAATQTVWGEGPEDAELMIVGEQPGDREDLEGRPFVGPAGHLLREAMVAAGAEVRQT 357 Query: 151 HISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 ++ ++N E+ CR + ++ I P++++ +G + Sbjct: 358 WLTNAVKHFKFMPRGKRRLHQNPDRQEILHCRWWLGLELAFIRPRMVVALGASAAFALTD 417 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ------YPLIKKNTWHALITLKK 256 N+A T + G+ P L + HP +++ ++ +I + Sbjct: 418 NNAPLTSR-RGQ---AEIGLHGGPVLISWHPSYILRLNDSVARERARRELIEDIIQAAR 472 >gi|331696452|ref|YP_004332691.1| phage SPO1 DNA polymerase-like protein [Pseudonocardia dioxanivorans CB1190] gi|326951141|gb|AEA24838.1| phage SPO1 DNA polymerase-related protein [Pseudonocardia dioxanivorans CB1190] Length = 194 Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 69/180 (38%), Gaps = 13/180 (7%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 L L+ + DC L + + + LM++G P D ++ G PF G G + Sbjct: 4 DLDALRDAVTRCTDCELHADATHAVFGAGPASAWLMLVGEQPGDREDREGAPFVGPAGRL 63 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPK 188 LD L+ + R +++++ + ++ + + CR ++ ++ P+ Sbjct: 64 LDTALERAGVDRDEVYVTNVVKHFRFEREGKRRLHKTPAVRHVRACRHWFDDELAVVGPR 123 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ-YPLIKKNT 247 +++ +G D + + G+ + T+HP +++ P + Sbjct: 124 VVVTLGATAAKALVGPD-VRISEERGEVREWQ----GRSLVPTIHPSAILRGSPEARDAA 178 >gi|254168174|ref|ZP_04875021.1| uracil-DNA glycosylase, family 4, putative [Aciduliprofundum boonei T469] gi|197622940|gb|EDY35508.1| uracil-DNA glycosylase, family 4, putative [Aciduliprofundum boonei T469] Length = 252 Score = 131 bits (330), Expect = 8e-29, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 74/177 (41%), Gaps = 4/177 (2%) Query: 73 KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 K + EL +R C L +T + + LM+I P + ++ +GK F G + Sbjct: 6 KKKRMKELNEEIRKCERCKLYATRKNAVVGEGNLDAKLMLIAQAPGEKEDETGKMFVGPS 65 Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192 G +LD++L+ + R +++++ + P R E+ C + ++IE+++P+IL+ Sbjct: 66 GKILDELLEIAGLKREEVYMTNLIKCFLPNCRKRREGEISACSYFLDKEIEIVNPEILVP 125 Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249 +G + F T GK I HP L+ +K Sbjct: 126 LGYFATRYIFQKYNIDTSLIYGKL----IWTGEIKIYPLEHPSTLLYDESKRKILEE 178 >gi|260428590|ref|ZP_05782569.1| uracil-DNA glycosylase superfamily protein [Citreicella sp. SE45] gi|260423082|gb|EEX16333.1| uracil-DNA glycosylase superfamily protein [Citreicella sp. SE45] Length = 471 Score = 131 bits (330), Expect = 8e-29, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 76/195 (38%), Gaps = 11/195 (5%) Query: 54 TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113 + + + + + A+ +L + L + C L + + LMI+ Sbjct: 257 PTVAPLRAERIGERLRAARVPEPGDDLAAGLAACRRCPLWQNATQPVPGEGPLDAPLMIV 316 Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNL 166 G P D +++ G+PF G G + D++ + R + +++ +++ Sbjct: 317 GEQPGDLEDLEGRPFVGPAGQLFDEVAARAGLDRARAYVTNAVKHFKFAARGKRRIHQSP 376 Query: 167 SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII 226 + E++ CR + + + P+++L +G + + + G + Sbjct: 377 TQGEIQHCRWWLDLERAQVKPRLILAMGATALDSLTGDRRGLLTRRGG----VEQTAEGT 432 Query: 227 PTLATVHPQELIQYP 241 P L TVHP L++ P Sbjct: 433 PVLVTVHPSYLLRLP 447 >gi|148927323|ref|ZP_01810888.1| phage SPO1 DNA polymerase-related protein [candidate division TM7 genomosp. GTL1] gi|147887279|gb|EDK72738.1| phage SPO1 DNA polymerase-related protein [candidate division TM7 genomosp. GTL1] Length = 207 Score = 131 bits (330), Expect = 8e-29, Method: Composition-based stats. Identities = 44/201 (21%), Positives = 86/201 (42%), Gaps = 3/201 (1%) Query: 60 HSPLVQQADSIAQKACSLHELKSLLRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPS 118 + S++ K L ++++ + + + C L T+ + + ++ IG P Sbjct: 2 KQAPAAKDHSLSDKRALLDQIRTDILAANVCPHLAKTATNLVMGDGNLDAKIVFIGEAPG 61 Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPII 178 ++ G PF G G LD+ML S + R ++I+ I + PP NR+ S E P + Sbjct: 62 KKEDEQGLPFVGAAGRFLDEMLASANLKREDVYITNIVKYRPPNNRDPSPEEKRAFWPYV 121 Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238 RQ+++I P++++ +G + FF QK G + I + HP + Sbjct: 122 ARQLKVIGPEVIVTLGRHSMEFFL--PGQKISVVHGDPKRVTFGKEKIVVVPLFHPAAAL 179 Query: 239 QYPLIKKNTWHALITLKKALK 259 +++ L K ++ Sbjct: 180 YNGGMRQTLIDDFSRLPKIVE 200 >gi|332799272|ref|YP_004460771.1| phage SPO1 DNA polymerase-like protein [Tepidanaerobacter sp. Re1] gi|332697007|gb|AEE91464.1| phage SPO1 DNA polymerase-related protein [Tepidanaerobacter sp. Re1] Length = 253 Score = 131 bits (329), Expect = 9e-29, Method: Composition-based stats. Identities = 39/189 (20%), Positives = 75/189 (39%), Gaps = 13/189 (6%) Query: 80 LKSLLRSFHDCHLC--STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 +K + + C L + L++IG P ++ G+PF G+ G +L Sbjct: 63 IKEHINTCQSCLLYAQENHTHKVAGEGALNSPLVLIGEGPGFDEDKQGRPFVGRAGQLLT 122 Query: 138 KMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197 +L ++I R +++I+ + PP NR E++ C + ++ LI PK+++ +G Sbjct: 123 TILNKMDIRREKVYITNVIKCRPPQNRTPLQKEIKACSKNLELELSLIQPKVIIALGAVP 182 Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWHALI 252 N+F + G+W N + T HP +++ K W Sbjct: 183 LNYF--KSGSSIMRERGQWINS----RDYWIMPTFHPAYILRQHGKTLNKVKWLVWQDFN 236 Query: 253 TLKKALKNL 261 K + Sbjct: 237 EAVAKAKEM 245 >gi|182415860|ref|YP_001820926.1| phage SPO1 DNA polymerase-related protein [Opitutus terrae PB90-1] gi|177843074|gb|ACB77326.1| phage SPO1 DNA polymerase-related protein [Opitutus terrae PB90-1] Length = 202 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 39/197 (19%), Positives = 82/197 (41%), Gaps = 16/197 (8%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 +L ++++ R C L T T+ G ++++G P D ++I+G+PF G G Sbjct: 7 RTLEKVRAQARDCTRCPLYKTGTQTVFGEGRVGARMLMVGEQPGDQEDIAGRPFVGPAGQ 66 Query: 135 MLDKMLQSIEIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISP 187 +L++ L+ I R ++ ++ ++ + E+ CRP + ++EL+ P Sbjct: 67 LLNRALEEAGIDRDEVFVTNAVKHFKWVRAGKRRLHKKPNAAEINACRPWLEAELELVQP 126 Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247 +++ +G + Q G+ LAT+HP +++ P ++ Sbjct: 127 DLIVALGATAAQTLMG-RQFRVTQQHGQVLAAPCAKG---FLATIHPSAVLRTPPPDRDA 182 Query: 248 -----WHALITLKKALK 259 L + LK Sbjct: 183 AYAGLVSDLKAAVRFLK 199 >gi|152965489|ref|YP_001361273.1| phage SPO1 DNA polymerase-related protein [Kineococcus radiotolerans SRS30216] gi|151360006|gb|ABS03009.1| phage SPO1 DNA polymerase-related protein [Kineococcus radiotolerans SRS30216] Length = 229 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 34/228 (14%), Positives = 74/228 (32%), Gaps = 15/228 (6%) Query: 45 SIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQ 104 + I + + A L +L+ C L + + + Sbjct: 2 PVSRPPDSIGGVTPASTQSRPGAAQWVPPGADLEQLRRAAPDCRGCELWEPATQVVFSAG 61 Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP-WHPPGN 163 ++++G P D ++ G PF G G +L K + I +++ + Sbjct: 62 APDARMVLVGEQPGDQEDRRGVPFVGPAGRLLQKAVAEAGIDLATTYVTNAVKHFRFTQE 121 Query: 164 RNLSNIEME--------ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK 215 CRP + ++ + P++++ +G + ++ G+ Sbjct: 122 APGKRRIHASPDVAHVTACRPWLAAELVQVDPEVVVCLGATAAKALL-PKDFRVTKHRGQ 180 Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLIKKNT-----WHALITLKKAL 258 L T L T+HP +++ P +++ L T AL Sbjct: 181 LFTLPTSLGEKRFLGTIHPSAVLRTPEAERDAAYAALVADLRTAATAL 228 >gi|85708488|ref|ZP_01039554.1| Uracil-DNA glycosylase:Phage SPO1 DNA polymerase-related protein [Erythrobacter sp. NAP1] gi|85690022|gb|EAQ30025.1| Uracil-DNA glycosylase:Phage SPO1 DNA polymerase-related protein [Erythrobacter sp. NAP1] Length = 478 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 40/232 (17%), Positives = 78/232 (33%), Gaps = 17/232 (7%) Query: 42 KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTIC 101 E + + R + + SL ++ + + DC + I Sbjct: 250 PEAELIPDLIAGAQAREAGMVAAGE-REVKTIPESLAAVEQGIAACRDCPIADCGTRAIM 308 Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 LMI+G P D ++ G+PF G G +LD+ L I R+ +++ Sbjct: 309 GEGAADAPLMIVGEQPGDQEDQQGRPFVGPAGQLLDQCLDHAGIDRSTAYVTNAVKHFKF 368 Query: 162 G-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLG 214 ++ + E++ CR + + L+ P+++L +G + G Sbjct: 369 KWKGKRRIHQTPTAKEVDTCRWWLEAERSLVKPRVVLALGASAARGLLGRTVSV-GKERG 427 Query: 215 KWSNLCTPHSIIPTLATVHPQELIQ-----YPLIKKNTWHALITLKKALKNL 261 + L TVHP L++ + L ++ L L Sbjct: 428 RPIPLEDGSE---LWVTVHPSYLLRLEGEACDEQGQLFARDLAAVRARLAEL 476 >gi|113866662|ref|YP_725151.1| Uracil-DNA glycosylase [Ralstonia eutropha H16] gi|113525438|emb|CAJ91783.1| Uracil-DNA glycosylase [Ralstonia eutropha H16] Length = 234 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 35/227 (15%), Positives = 77/227 (33%), Gaps = 23/227 (10%) Query: 28 FDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSF 87 P T +++R + D T+ + + + + L Sbjct: 1 MRHPRPWPTLKNRRPKLPPDE-----TDSSTARRAPMPEHRKLPVS-------RDELNQC 48 Query: 88 HDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR 147 C L + + +M++G P +++ G PF G G++LD+ L S + R Sbjct: 49 RRCPLWRNATQGVPGAGAAHARIMLVGEQPGAQEDLQGSPFVGPAGHLLDEALASAGLDR 108 Query: 148 TQIHISMISP-----WHPPGNRNLSN--IEMEICRPIIMRQIELISPKILLFIGNKTKNF 200 ++ ++ W + S E+E C + R++E + P++++ +G Sbjct: 109 DKLFMTNAVKHFKFEWRGKRRLHKSPAQQEIEACSLWLERELEKVGPRVVVALGATAARA 168 Query: 201 FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247 + + H +AT HP ++ + Sbjct: 169 VLGRKSVSLAGMM----ETPVEHEGRLVIATYHPSFALRQRTDEARA 211 >gi|149184846|ref|ZP_01863164.1| Uracil-DNA glycosylase:Phage SPO1 DNA polymerase-related protein [Erythrobacter sp. SD-21] gi|148832166|gb|EDL50599.1| Uracil-DNA glycosylase:Phage SPO1 DNA polymerase-related protein [Erythrobacter sp. SD-21] Length = 478 Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 75/207 (36%), Gaps = 16/207 (7%) Query: 67 ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126 A ++ +L + + C + + + LMI+G P D ++ +G+ Sbjct: 275 ALEFEERPDTLAAIDKAIHGCRKCPIGQLDNHAVMGEGPQDAALMIVGEQPGDQEDQTGR 334 Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIM 179 PF G G +LD L+ + I R +++ ++N E++ CR I Sbjct: 335 PFVGPAGQLLDAHLEKVGIDRRAAYVTNAVKHFKYVQRGKRRLHQNPGAKEIDTCRWWIE 394 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 + E++ PK++L +G + G L T HP L++ Sbjct: 395 SEREIVKPKLVLAMGASAARSVLG-KTVSISRVRGAPIALENGSE---LWVTAHPSYLLR 450 Query: 240 -----YPLIKKNTWHALITLKKALKNL 261 + L +++ L+ L Sbjct: 451 LEGPAREEQARLFDADLAAVRQRLEEL 477 >gi|295690482|ref|YP_003594175.1| phage SPO1 DNA polymerase-like protein [Caulobacter segnis ATCC 21756] gi|295432385|gb|ADG11557.1| phage SPO1 DNA polymerase-related protein [Caulobacter segnis ATCC 21756] Length = 475 Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 41/244 (16%), Positives = 80/244 (32%), Gaps = 18/244 (7%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P AT + + P + ++A + E+++ ++ C Sbjct: 236 PELIATAQDRAAAMVAAPTRAPSDRVLKAALRHAREASYGQGAPTTSEEVEAGVQVCRRC 295 Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150 L + + LM +G P D ++++G+PF G G + DK L + R Q Sbjct: 296 DLWRDATQGVPGEGPRPAPLMFVGEQPGDQEDLAGRPFVGPAGQVFDKALAEAGVSRDQA 355 Query: 151 HISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 ++ ++ E+ CR + + ++ P++++ +G Sbjct: 356 FVTNAVKHFKHEVRGKRRIHQTPDRGEVTACRWWLDAERRIVRPRVIVMLGATAALGVVG 415 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI--KKNTW----HALITLKKA 257 N GK L + T HP L++ P K + L Sbjct: 416 -KPTPIGANRGKALQLPDQAQG---VVTYHPSFLLRVPDADTKAKAYAEFVEDLRM-AGK 470 Query: 258 LKNL 261 L L Sbjct: 471 LAGL 474 >gi|77164595|ref|YP_343120.1| Phage SPO1 DNA polymerase-related protein [Nitrosococcus oceani ATCC 19707] gi|254433152|ref|ZP_05046660.1| uracil-DNA glycosylase, family 4 [Nitrosococcus oceani AFC27] gi|76882909|gb|ABA57590.1| Phage SPO1 DNA polymerase-related protein [Nitrosococcus oceani ATCC 19707] gi|207089485|gb|EDZ66756.1| uracil-DNA glycosylase, family 4 [Nitrosococcus oceani AFC27] Length = 189 Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 6/193 (3%) Query: 68 DSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127 D +KA +L ELK + + ++MIIG P + +G+P Sbjct: 2 DDFLEKAVTLQELKWHCERSLGPEVPKGEK-LVFGEGPSPAEIMIIGEAPGVQEAKTGRP 60 Query: 128 FSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP 187 F G +G +L ++L I + R ++IS I HPPGNR E++ P ++RQIEL+ P Sbjct: 61 FVGSSGKLLTQLLHQIGLKREHVYISNILKTHPPGNRKPYRSEIKRELPFLLRQIELLQP 120 Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247 ++L+ +G + A K G+W + +PT T HP ++ K Sbjct: 121 QLLILLGATALQALLDPKA-KITALRGQWVEV----KKLPTFVTYHPAAALRDETKKTAL 175 Query: 248 WHALITLKKALKN 260 L++ L++ Sbjct: 176 EQDFAVLQRHLES 188 >gi|156743997|ref|YP_001434126.1| phage SPO1 DNA polymerase-like protein [Roseiflexus castenholzii DSM 13941] gi|156235325|gb|ABU60108.1| phage SPO1 DNA polymerase-related protein [Roseiflexus castenholzii DSM 13941] Length = 212 Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 75/188 (39%), Gaps = 6/188 (3%) Query: 73 KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 A L ++ +R+ C L +++ + +M IG P ++ G+PF G Sbjct: 3 AANMLQQIADEVRACTACRLHQSAMRAVPGEGPADAKVMFIGEAPGFHEDRQGRPFVGAA 62 Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192 G L+++L + R+++ I+ + PP NR+ E+ C + RQI ++P +++ Sbjct: 63 GQFLEELLGLAGLRRSEVFIANVIKHRPPDNRDPLPDEIAACSQFLERQIAALNPLVIVT 122 Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 +G + +F + +W + +HP + P + Sbjct: 123 LGRFSMARWFPGEKISRIHGQPRWIE------GRMIIPMMHPAAALHQPQYRALIEDDFR 176 Query: 253 TLKKALKN 260 L + + Sbjct: 177 RLPEFIAQ 184 >gi|58038622|ref|YP_190586.1| DNA polymerase related protein [Gluconobacter oxydans 621H] gi|58001036|gb|AAW59930.1| DNA polymerase related protein [Gluconobacter oxydans 621H] Length = 421 Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 41/241 (17%), Positives = 81/241 (33%), Gaps = 18/241 (7%) Query: 33 NEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSI-AQKACSLHELKSLLRSFHDCH 91 + A + +P+ D+ + SL L+ C Sbjct: 184 DSADPAEVVAAARNIATAGAGNEWWEGIAPVRLHPDAADIASSPSLASLRGKAIDCRMCD 243 Query: 92 LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH 151 LC+ + T+ ++ +G P D +++ G+PF G G + D+ L+ R Q Sbjct: 244 LCAPATRTVSGEGNPEARIIFVGEQPGDQEDLQGRPFVGPAGQLFDRALKEAGGNRAQAW 303 Query: 152 ISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204 I+ ++ E+ C P + + ++++PK+ + +G + Sbjct: 304 ITNAVKHFKFVPRGNRRIHQKPDAAEITACSPWLATERKVLAPKVTVMLGVTGASAVLGR 363 Query: 205 DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH------ALITLKKAL 258 + + + I L TVHP L++ P + T L AL Sbjct: 364 QVTV---SRERSRPIPLADGSI-GLVTVHPSYLLRLPDEESKTREYTKFVTDLRMAISAL 419 Query: 259 K 259 Sbjct: 420 A 420 >gi|186474189|ref|YP_001861531.1| phage SPO1 DNA polymerase-related protein [Burkholderia phymatum STM815] gi|184196521|gb|ACC74485.1| phage SPO1 DNA polymerase-related protein [Burkholderia phymatum STM815] Length = 244 Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 34/224 (15%), Positives = 79/224 (35%), Gaps = 18/224 (8%) Query: 27 VFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRS 86 + P + +++ + + + Q+ L E Sbjct: 1 MQRAPPTDDAMSTRKTSPRSPGKTGEADDGKTKPAAKDSPLVEPHQQPARLAE------- 53 Query: 87 FHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM 146 C L S + + T + +M++G P D +++ G PF G G +LD L+ + Sbjct: 54 CRRCALWSRATQAVGGTGPKHAPIMMVGEQPGDKEDLQGMPFVGPAGELLDDALKDAGVD 113 Query: 147 RTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199 R ++++ ++ + E++ C + R++ + P++L+ +G Sbjct: 114 RRDVYVTNAVKHFKWEPRGKRRMHKTPAQREVDACHYWLERELASVGPRVLVALGATALK 173 Query: 200 FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI 243 ++ + +GK H + T HP ++ P Sbjct: 174 AILDDRDARLQAVVGKVLE----HGGRHVVPTYHPSFALRAPDE 213 >gi|124023137|ref|YP_001017444.1| uracil-DNA glycosylase [Prochlorococcus marinus str. MIT 9303] gi|123963423|gb|ABM78179.1| Uracil-DNA glycosylase [Prochlorococcus marinus str. MIT 9303] Length = 183 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 76/183 (41%), Gaps = 11/183 (6%) Query: 85 RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIE 144 C + + + LM+IG P ++ GKPF G++G +LD++++S+ Sbjct: 5 NGCGACVMPVQQAQVVVSRGNPQACLMVIGEAPGAREDELGKPFVGRSGQLLDRLMESVG 64 Query: 145 IMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 + +I + PP NR + E+ RP + +QIEL+ P ++ G+ Sbjct: 65 LDPVVDAYICNVVKCRPPKNRRPTLAEIASYRPWLEQQIELVDPYVIALAGSTAVEAILG 124 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL-----IKKNTWHALITLKKAL 258 + G+W + + +HP L++ P T L++++ L Sbjct: 125 FKG-GITKLRGQWQHW----HGRLLMPLLHPAYLLRNPSPVDGAPIALTRGDLMSIRHRL 179 Query: 259 KNL 261 N+ Sbjct: 180 SNV 182 >gi|323141535|ref|ZP_08076421.1| putative uracil-DNA glycosylase A [Phascolarctobacterium sp. YIT 12067] gi|322413994|gb|EFY04827.1| putative uracil-DNA glycosylase A [Phascolarctobacterium sp. YIT 12067] Length = 217 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 35/170 (20%), Positives = 75/170 (44%), Gaps = 5/170 (2%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 ++ L EL+ L + C L +++ + ++ +G P ++ G P G Sbjct: 3 DESMDLSELEGELANCQACPLRQDAIAPVSWYGNPESPIVFVGEGPGQVEDDYGCPLIGP 62 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC-RPIIMRQIELISPKIL 190 +G +LDK L + ++ R ++ + + P NR E + C + + R++E+I PK++ Sbjct: 63 SGQLLDKALWAAKMTRDRVLTTNVIKCRPKNNRTPDIAEADFCAKQWLQRELEIIQPKVI 122 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 + +G+ + + ++ G W +AT HP L++ Sbjct: 123 VALGSVALHC-LGRPDMRITRDRGMWFRTE---QGFDCIATYHPAYLLRQ 168 >gi|269926975|ref|YP_003323598.1| phage SPO1 DNA polymerase-related protein [Thermobaculum terrenum ATCC BAA-798] gi|269790635|gb|ACZ42776.1| phage SPO1 DNA polymerase-related protein [Thermobaculum terrenum ATCC BAA-798] Length = 201 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 16/198 (8%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 L ++ L+S C L S + I +LMIIG +PS+ D +GKPFSG +G + Sbjct: 6 DLQQIAQDLQSCQRCDLYLYSRTAIPGNGDSQANLMIIGESPSEYDESTGKPFSGPSGRV 65 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPK 188 LD L+ + + R ++ ++ + NR E + C + +I +I PK Sbjct: 66 LDSWLRKLGLTREEVWLTNVVKHRSVDLKDPRRRNRAPIASEYKACSHWLRLEISIIRPK 125 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL--IQYPLIKK- 245 I++ +G K ++ GK P+ I + T H + ++ PL+++ Sbjct: 126 IIVALGASAGKALLG-SGFKISRDRGK--TFPGPYDSI-VVPTYHTAYILKLKSPLLEQV 181 Query: 246 --NTWHALITLKKALKNL 261 L T+K+ L L Sbjct: 182 SSQVEQDLDTIKRLLSQL 199 >gi|218462023|ref|ZP_03502114.1| probable DNA-directed DNA polymerase protein (uracil-DNA glycosylase) [Rhizobium etli Kim 5] Length = 155 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 60/151 (39%), Positives = 92/151 (60%), Gaps = 1/151 (0%) Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170 M+IG PS D+ G PFSGK+G + DKML +I + R+ + ++ + PW PPGNR S E Sbjct: 1 MVIGSAPSAEDDREGLPFSGKSGQLFDKMLAAIGLDRSSVLLTQVIPWRPPGNRAASAAE 60 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230 ++ICRP I RQI L P+++L +GN FFF + G+W ++ IP +A Sbjct: 61 IDICRPFIERQIALAEPQVILLLGNFAARFFFGENDTIHG-LRGRWKDIVIADRAIPAIA 119 Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALKNL 261 ++HPQ+L+ P+ K+ W+ L+ + LK+L Sbjct: 120 SLHPQDLLTAPVNKRLAWNDLLAFQAKLKSL 150 >gi|90420004|ref|ZP_01227913.1| uracil-DNA glycosylase [Aurantimonas manganoxydans SI85-9A1] gi|90336045|gb|EAS49793.1| uracil-DNA glycosylase [Aurantimonas manganoxydans SI85-9A1] Length = 487 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 92/262 (35%), Gaps = 22/262 (8%) Query: 17 LFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIA----Q 72 ++A+ +P + R+ + + + R + ++ D +A Sbjct: 229 KYWANM-PETALIKPLIAGAEAASRRMIETAPTLPSLRHERQKERDMAREPDLMARTSDA 287 Query: 73 KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 + S+ + C L + T+ E ++ +G P D ++I+G+PF G Sbjct: 288 RPTSIAAAREAASHCRACPLWEPATQTVFGRGPEDAPVIFVGEQPGDQEDIAGEPFIGPA 347 Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELI 185 G + D L I R++ +++ + + E+ CR + + ELI Sbjct: 348 GKVFDAALGEAGIDRSRAYVTNAVKHFKFAPRGKRRIHAKPNGGEVRACRWWLDIERELI 407 Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-- 243 PK+++ +G + +L L TVHP +++ P Sbjct: 408 RPKLIVALGATAASAVLG-KTVTIRDARSTLIDL---DEGTRALVTVHPSYILRLPDKVT 463 Query: 244 ----KKNTWHALITLKKALKNL 261 ++ + + + + L Sbjct: 464 QDRERRAFHADMALVLQTVPEL 485 >gi|119387332|ref|YP_918366.1| uracil-DNA glycosylase superfamily protein [Paracoccus denitrificans PD1222] gi|119377907|gb|ABL72670.1| Uracil-DNA glycosylase superfamily [Paracoccus denitrificans PD1222] Length = 479 Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 83/223 (37%), Gaps = 11/223 (4%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P A E++ + A P + + + +L + + C Sbjct: 237 PAMLADAEARVERMRAAGASIPRPGAGPVSTRYRNAMPQAVEPPATLDQARQAALQCRRC 296 Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150 LC + T+ +MI+G P D ++++G+PF+G G +L M+ + QI Sbjct: 297 KLCEAATQTVWGEGAADAAVMIVGEQPGDHEDLTGRPFAGPAGQLLRGMIADAGLDGAQI 356 Query: 151 HISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 ++ +RN + E+ CR + ++ + P++ L +G Sbjct: 357 WLTNAVKHFKFAPRGKRRLHRNPARDEIRHCRWWLGLELAFVRPRVTLALGASAAFA-LT 415 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKN 246 +D + ++ G T P L + HP +++ P + Sbjct: 416 DDDRPMHRRRGTV---ETGLHGGPVLISWHPAHILRLPDPDRR 455 >gi|312602706|ref|YP_004022551.1| uracil DNA glycosylase superfamily protein [Burkholderia rhizoxinica HKI 454] gi|312170020|emb|CBW77032.1| Uracil DNA glycosylase superfamily protein [Burkholderia rhizoxinica HKI 454] Length = 274 Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 63/167 (37%), Gaps = 11/167 (6%) Query: 84 LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143 L C L + + +M++G P D ++ G+PF G G +LD L+ Sbjct: 84 LDDCRRCALWHDASQPVPGEGPAHAPIMMVGEQPGDQEDRQGRPFVGPAGVLLDDALREA 143 Query: 144 EIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 + R ++++ ++ + E+E C + R+ + ++P +++ +G Sbjct: 144 GVARDDVYVTNAVKHFKWEPRGKRRMHKTPAQREIEACHYWLDREFDTVAPAVVVALGAT 203 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI 243 + ++LG+ + T HP ++ P Sbjct: 204 ALKAVLQDRTVTLQRSLGQTIEY----GGHFVIPTYHPSFALRAPDE 246 >gi|85373904|ref|YP_457966.1| Uracil-DNA glycosylase:Phage SPO1 DNA polymerase-related protein [Erythrobacter litoralis HTCC2594] gi|84786987|gb|ABC63169.1| Uracil-DNA glycosylase:Phage SPO1 DNA polymerase-related protein [Erythrobacter litoralis HTCC2594] Length = 476 Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 76/207 (36%), Gaps = 16/207 (7%) Query: 67 ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126 + + + +L + + + C + + + LMI+G P D ++ +G+ Sbjct: 273 SRELEDRPETLEAIDRAIHACRQCPIGELDNQAVMGEGPQAAALMIVGEQPGDQEDKAGR 332 Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIM 179 PF G G +LD+ L+ I R +++ +++ + E++ CR I Sbjct: 333 PFVGPAGQLLDRHLEKAGIERRGAYVTNTVKHFKFAQRGKRRLHQSPTAKEIDTCRWWIE 392 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 + L+ PKI+L +G + G+ L T HP L++ Sbjct: 393 SERALVKPKIVLALGASAARGMLG-KTVSISKVRGEPIALEDGSE---LWVTAHPSYLLR 448 Query: 240 -----YPLIKKNTWHALITLKKALKNL 261 K L +K+ L L Sbjct: 449 LDGEAAEKQAKLFDADLAAVKERLGEL 475 >gi|76800697|ref|YP_325705.1| uracil-DNA glycosylase-like protein [Natronomonas pharaonis DSM 2160] gi|76556562|emb|CAI48133.1| uracil-DNA glycosylase homolog [Natronomonas pharaonis DSM 2160] Length = 194 Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 71/165 (43%), Gaps = 2/165 (1%) Query: 84 LRSFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142 + C LC++ + DL+ +G P ++++ G+PF G++G++LD+ L+ Sbjct: 7 VTDCRRCSELCASRSRIVNGVGPTDADLLFVGEAPGETEDEVGEPFVGRSGDVLDEGLRD 66 Query: 143 IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202 + R I I+ PP NR+ + E CRP + +I + P +++ +G Sbjct: 67 RGLSRRDIRITNCVRCRPPDNRDPTAEERSNCRPYLDAEIAAVDPDVVVALGKVPAEHLL 126 Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247 + + + G + + L VHP + P ++ Sbjct: 127 D-RSVAVTEAAGAIYDARIDGTARRVLVCVHPAATLYDPSQREQF 170 >gi|16126572|ref|NP_421136.1| phage SPO1 DNA polymerase-like protein [Caulobacter crescentus CB15] gi|221235354|ref|YP_002517791.1| uracil DNA glycosylase superfamily protein [Caulobacter crescentus NA1000] gi|13423858|gb|AAK24304.1| phage SPO1 DNA polymerase-related protein [Caulobacter crescentus CB15] gi|220964527|gb|ACL95883.1| uracil DNA glycosylase superfamily protein [Caulobacter crescentus NA1000] Length = 479 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 38/248 (15%), Positives = 80/248 (32%), Gaps = 24/248 (9%) Query: 27 VFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRS 86 + + + A + P + + A A +L +++ + Sbjct: 238 LIEAAQDRAAAMVTTPPRP------PSERVLKAAQRHARDAPYNAGAPTTLDAVRAGVSV 291 Query: 87 FHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM 146 C L + + LM +G P D ++++G P G G + D+ L + + Sbjct: 292 CRRCDLWREATQGVPGDGAPSAPLMFVGEQPGDQEDLAGSPLVGPAGQIFDRALAEVSVR 351 Query: 147 RTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199 R Q +++ ++ + E+ CR + + L+ P +++ +G Sbjct: 352 REQTYVTNAVKHFKHELNGKRRLHKTPTQGEVSACRWWLDAERRLVRPTVIVMLGATAAF 411 Query: 200 FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK------KNTWHALIT 253 + G+ L L T HP L++ P ++ L Sbjct: 412 GVMG-RPTPVRETRGRPLPLPDGVQG---LVTFHPSYLLRLPDAAARENAYRSFVDDLR- 466 Query: 254 LKKALKNL 261 L L L Sbjct: 467 LAGRLAGL 474 >gi|111020972|ref|YP_703944.1| DNA polymerase [Rhodococcus jostii RHA1] gi|110820502|gb|ABG95786.1| possible DNA polymerase [Rhodococcus jostii RHA1] Length = 216 Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 72/199 (36%), Gaps = 13/199 (6%) Query: 60 HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSD 119 A L L H C L + T+ +M++G P D Sbjct: 2 SRATKPSAAPFVPDTDDLEALSHAADGCHGCDLYRDAEQTVFGAGRRSARMMLVGEQPGD 61 Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH---------PPGNRNLSNIE 170 ++ +G+PF G G +L+K L + I R +++ ++ + E Sbjct: 62 QEDRAGEPFVGPAGKLLNKALDAAGINRDLTYVTNAVKHFKFVPAERGTRRIHKKPNRTE 121 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP---HSIIP 227 + CRP ++ ++ + P +L+ +G + T G+ +L Sbjct: 122 IVACRPWLIAELAAVQPDVLVCLGATAAQALLGPSFRLTEH-RGELLHLDGEVDVDMDPD 180 Query: 228 TLATVHPQELIQYPLIKKN 246 AT+HP +++ P ++ Sbjct: 181 VFATIHPSAVLRGPSDDRD 199 >gi|312897619|ref|ZP_07757036.1| uracil-DNA glycosylase, family 4 [Megasphaera micronuciformis F0359] gi|310621252|gb|EFQ04795.1| uracil-DNA glycosylase, family 4 [Megasphaera micronuciformis F0359] Length = 216 Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats. Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 12/183 (6%) Query: 82 SLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML 140 + L CHLC + + E LM +G P ++ G P G +G +LDK L Sbjct: 8 AALTDCTACHLCREGNRGPTQWSGPEDSPLMFVGEGPGGVEDEYGVPLVGPSGKLLDKAL 67 Query: 141 QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP-IIMRQIELISPKILLFIGNKTKN 199 S+ + R +I+++ I P NR + E C + +IE + P +++ +G Sbjct: 68 WSVGLTRDRIYVTNIVKCRPHNNRTPTLDEGRFCADLHLRAEIEAVKPAVIVCLGKVAFQ 127 Query: 200 FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWHALITL 254 +F+ + +N GKW + IP + T HP L++ K ++ L + Sbjct: 128 YFYGSAGSIM-RNRGKWLDYE----KIPVMPTYHPAFLLRQTGKELVESKWQVYYDLKSA 182 Query: 255 KKA 257 + Sbjct: 183 VEK 185 >gi|254167986|ref|ZP_04874834.1| uracil-DNA glycosylase, family 4, putative [Aciduliprofundum boonei T469] gi|289595947|ref|YP_003482643.1| phage SPO1 DNA polymerase-related protein [Aciduliprofundum boonei T469] gi|197623029|gb|EDY35596.1| uracil-DNA glycosylase, family 4, putative [Aciduliprofundum boonei T469] gi|289533734|gb|ADD08081.1| phage SPO1 DNA polymerase-related protein [Aciduliprofundum boonei T469] Length = 249 Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 75/182 (41%), Gaps = 4/182 (2%) Query: 73 KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 K + EL +R C L +T + + LM+I P + ++ +GK F G + Sbjct: 3 KKERMKELNEEIRKCERCKLYATRKNAVVGEGNLDAKLMLIAQAPGEKEDETGKMFVGPS 62 Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192 G +LD++L+ + R +++++ + P R E+ C + ++IE+++P+IL+ Sbjct: 63 GKILDELLEIAGLKREEVYMTNLIKCFLPNYRKPKEGEISACSYFLDKEIEIVNPEILVP 122 Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 +G + F + GK I HP L+ ++ Sbjct: 123 LGYFATRYIFQKYNVNSPPIYGKL----IWTGEIKIYPLEHPSTLLYDDSKREILEEHYR 178 Query: 253 TL 254 L Sbjct: 179 KL 180 >gi|257055335|ref|YP_003133167.1| uracil-DNA glycosylase, family 4 [Saccharomonospora viridis DSM 43017] gi|256585207|gb|ACU96340.1| uracil-DNA glycosylase, family 4 [Saccharomonospora viridis DSM 43017] Length = 211 Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 83/206 (40%), Gaps = 15/206 (7%) Query: 67 ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126 A+ + ++ L+ C L + + T+ + L+++G P D ++ G+ Sbjct: 7 AEHYLPRERAVTSLRQAAAGCRGCDLFTDATQTVFGEGADRARLVLVGEMPGDREDREGR 66 Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPW---------HPPGNRNLSNIEMEICRPI 177 PF G +GN+LD+ L I R ++++ ++ + ++ C+P Sbjct: 67 PFVGPSGNLLDRALGEAGIDRDTVYVTNAVKHFRFTREGNRRRRLHKKPTRSQITACKPW 126 Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237 ++ +++ + P ++ +G F+ D + + G+ L +ATVHP + Sbjct: 127 LLAELDAVRPDVVGLLGATAAQALFDADFRVSAH-RGEVLKLPGLDDPPLAVATVHPSAV 185 Query: 238 IQYPLIKK-----NTWHALITLKKAL 258 ++ + L + AL Sbjct: 186 LRARDSDRERAYAEFVADLRVVAAAL 211 >gi|330994445|ref|ZP_08318370.1| DNA polymerase [Gluconacetobacter sp. SXCC-1] gi|329758445|gb|EGG74964.1| DNA polymerase [Gluconacetobacter sp. SXCC-1] Length = 415 Score = 128 bits (321), Expect = 9e-28, Method: Composition-based stats. Identities = 37/226 (16%), Positives = 73/226 (32%), Gaps = 17/226 (7%) Query: 46 IDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQT 105 ++P+ L D + SL R+ C + + T+ Sbjct: 189 PADPLRPLALNTLPPPALPLVTDLDIGQITSLRAAYLAARTCLICPMARHATQTVFGEGE 248 Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH------ 159 +M +G P D ++ +G+PF G G + D+ L I R +++ Sbjct: 249 PTARMMFVGEQPGDREDQAGRPFVGPAGQLFDRALAEAGIDRADAYVTNTVKHFKFIRRG 308 Query: 160 -PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218 + E+ C P + + +I P++L+ +G + + + Sbjct: 309 TRRIHEKAGREEIAACAPWLAAERRIIRPRVLVMLGATAASALLG-RSVTIGHERSRPIP 367 Query: 219 LCTPHSIIPTLATVHPQELIQYPLIKKNTWH------ALITLKKAL 258 + + + TVHP L++ P T L L Sbjct: 368 MEDGSTG---VVTVHPSYLLRLPDADARTREYDRFVADLRLAASHL 410 >gi|294496120|ref|YP_003542613.1| phage SPO1 DNA polymerase-related protein [Methanohalophilus mahii DSM 5219] gi|292667119|gb|ADE36968.1| phage SPO1 DNA polymerase-related protein [Methanohalophilus mahii DSM 5219] Length = 178 Score = 128 bits (321), Expect = 9e-28, Method: Composition-based stats. Identities = 38/173 (21%), Positives = 76/173 (43%), Gaps = 12/173 (6%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 S +L+ + S C L +++ + + ++ IG P ++ SG PF G+ G Sbjct: 3 DSFEDLEEEINSCTACQLHDSAIHKVIMKGGQNPKVLFIGEAPGKKEDASGIPFCGRAGK 62 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 +LD M++ +++ ++ + PP NR E+ CR +QIE++ P +++ +G Sbjct: 63 ILDGMIEDMDLQQSDWAVINTVKCRPPNNRRPRKEELAACRAFFEQQIEMLEPDVIILLG 122 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI----QYPLI 243 N + F N + G+ ++ + + HP LI + P Sbjct: 123 NTAEEAFLGNRQLQW----GECRDIDGKN----VVKFYHPAALIYTKSRQPEQ 167 >gi|83954916|ref|ZP_00963594.1| putative uracil-DNA glycosylase [Sulfitobacter sp. NAS-14.1] gi|83840642|gb|EAP79814.1| putative uracil-DNA glycosylase [Sulfitobacter sp. NAS-14.1] Length = 473 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 69/179 (38%), Gaps = 13/179 (7%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 L + + C L + + +LMI+G P D +++SG+PF G G + D Sbjct: 283 DALAKDIAACARCPLHCNATQAVPGEGPMDAELMIVGEQPGDQEDLSGRPFIGPAGQLFD 342 Query: 138 KMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKIL 190 ++ + R + ++ ++ + E++ CR + +I + PK++ Sbjct: 343 QIAGRAGLARDKAFVTNAVKHFKFTPRGKRRLHQRPNASEVQHCRWWLDAEIAQVKPKLI 402 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKKNT 247 L +G T + G S P L T+HP L++ P K + Sbjct: 403 LGMGATAAEGLTGRRDAITAR-RGTV---EQSPSGTPVLLTLHPSYLLRLPDPQAKADA 457 >gi|332185098|ref|ZP_08386847.1| hypothetical protein SUS17_137 [Sphingomonas sp. S17] gi|332014822|gb|EGI56878.1| hypothetical protein SUS17_137 [Sphingomonas sp. S17] Length = 258 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 95/262 (36%), Gaps = 21/262 (8%) Query: 6 ILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQ 65 L ++ ++ D+GV + ++ + E R + H +P++ Sbjct: 11 PLDSALAASLLEWWHDAGVDLLVEDEPRDWMAEPIRPVSFAPPSAPQSPAAPHPLAPILT 70 Query: 66 QADSIAQKACSLHE-----LKSLL--RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPS 118 A AQ +L L S+ L +T LM++ P Sbjct: 71 PA--AAQLPDTLTAFLEWRLSDAAPEASWDGISLTAT--------GPADATLMVLVDCPD 120 Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPII 178 D +G+ SG G + D+ML +I R +H++ + P R +++E + Sbjct: 121 RDDGEAGQILSGAPGRLFDRMLAAIGQSRETVHLASVCARRPLAGRTPADLESRLAEI-A 179 Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238 + LI P+ LL +GN + G + + +A+ HP+ LI Sbjct: 180 RHHVGLIRPRGLLLLGNAASRAVLGTEL---TSARGHLHAVDHKNGKSQAVASFHPRFLI 236 Query: 239 QYPLIKKNTWHALITLKKALKN 260 + P+ K +W L L L Sbjct: 237 EKPMAKAESWKDLQLLMGDLAE 258 >gi|296268510|ref|YP_003651142.1| phage SPO1 DNA polymerase-related protein [Thermobispora bispora DSM 43833] gi|296091297|gb|ADG87249.1| phage SPO1 DNA polymerase-related protein [Thermobispora bispora DSM 43833] Length = 208 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 72/202 (35%), Gaps = 15/202 (7%) Query: 68 DSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127 + SL L+ R C L + T+ T M +G P D ++ G P Sbjct: 8 RFLPDGEPSLPALREAARRCQGCSLYRNATQTVFGTGPPDATFMFVGEQPGDQEDRQGAP 67 Query: 128 FSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMR 180 F G G +L + ++ I R +++++ + S E+ CRP + Sbjct: 68 FVGPAGRVLARAIEEAGIDRDRVYLTNAVKHFKFQTRGKRRIHERPSAAEIAACRPWLTA 127 Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 ++ ++ P + + +G A + + G +AT+HP +++ Sbjct: 128 ELRVVDPVVTVVLGATAARALLGP-AFRVTRRRG---EPIPRGVGSYYVATIHPSAVLRA 183 Query: 241 PL-IKKNTWHALIT---LKKAL 258 P + + + + L Sbjct: 184 PSGQRGPAYEGFLADVRVAARL 205 >gi|91779684|ref|YP_554892.1| Phage SPO1 DNA polymerase-related protein [Burkholderia xenovorans LB400] gi|91692344|gb|ABE35542.1| Phage SPO1 DNA polymerase-related protein [Burkholderia xenovorans LB400] Length = 214 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 78/199 (39%), Gaps = 20/199 (10%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 Q+ +L E C L + + +M++G P D++++ G+PF G Sbjct: 24 QQPATLDE-------CRRCTLWRNATQAVPGEGPRRASIMLVGEQPGDAEDLQGRPFVGP 76 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIEL 184 G +LDK L+ + R ++++ ++ E+E C + +++ Sbjct: 77 AGALLDKALEEAGLKRKDVYVTNAVKHFKWTPRGKRRMHKTPGQREIEACGYWLEQELRT 136 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPL 242 + ++++ +G ++ + LGK H +AT HP ++ P Sbjct: 137 VRARVIVALGATALKAVLDDSHARLQDALGK----TIGHGEHLVVATYHPSFALRAPDPE 192 Query: 243 IKKNTWHALITLKKALKNL 261 +++ + ++ + L Sbjct: 193 TRRHVYDTIVAALQTADKL 211 >gi|194288723|ref|YP_002004630.1| uracil-DNA glycosylase [Cupriavidus taiwanensis LMG 19424] gi|193222558|emb|CAQ68561.1| putative Uracil-DNA glycosylase [Cupriavidus taiwanensis LMG 19424] Length = 202 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 65/174 (37%), Gaps = 11/174 (6%) Query: 81 KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML 140 + L C L + + T +M++G P +++ G PF G G++LD+ L Sbjct: 11 RGELNECRRCPLWRNATQGVPGTGAAHARIMLVGEQPGSQEDLQGSPFVGPAGHLLDEAL 70 Query: 141 QSIEIMRTQIHISMISP-----WHPPGNRNLSN--IEMEICRPIIMRQIELISPKILLFI 193 Q+ + R ++ ++ W + S E+E C + R++E + P +++ + Sbjct: 71 QAAGLDRDKLFMTNAVKHFKFEWRGKRRLHKSPAQQEIEACNLWLERELEKVHPTVVVAL 130 Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247 G + + H +AT HP ++ + Sbjct: 131 GATAARAVLGRKSVTLAGMM----ETPVEHEGRLVIATYHPSFALRQRSDEARA 180 >gi|315500110|ref|YP_004088913.1| uracil-DNA glycosylase superfamily [Asticcacaulis excentricus CB 48] gi|315418122|gb|ADU14762.1| Uracil-DNA glycosylase superfamily [Asticcacaulis excentricus CB 48] Length = 280 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 52/270 (19%), Positives = 102/270 (37%), Gaps = 32/270 (11%) Query: 9 QEQILTIALFYADSGVYWVFDE-PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQA 67 ++ + F D + +++ P N E++ + + + N+ +PL A Sbjct: 12 MRELESYLSFLKDHELDDIYNAQPINRLLAENKSRSVTATA-----QNVSATVTPLPSAA 66 Query: 68 DSIAQKACSL----------------------HELKSLLRSFHDCHLC-STSLSTICATQ 104 A + SL L + + +F D L I Sbjct: 67 RVNALRPESLRHFDVERAVTAAAAIAASAATVEALYAAVDAFPDVPLRYEGGKGLIRGRG 126 Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 D++I+G P ++ + F GK G++ D L ++ + + + W P G R Sbjct: 127 ALPADVLIVGDVPDADEDEAQAAFQGKPGHLTDAALSALGLNARTLRLPG-LFWRPAGGR 185 Query: 165 NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC-TPH 223 ++ ++ + P + R IEL +PK+L+ G +++ + GK +L + Sbjct: 186 PATDEDIRLTSPFLRRLIELSAPKVLILCGATAVRSVLDSNDSVQ-KLRGKAHHLTLSGG 244 Query: 224 SIIPTLATVHPQELIQYPLIKKNTWHALIT 253 S + T P L++ PL KK W + Sbjct: 245 SSLRVFVTFPPALLLRQPLAKKAFWSDFLL 274 >gi|225575388|ref|ZP_03783998.1| hypothetical protein RUMHYD_03478 [Blautia hydrogenotrophica DSM 10507] gi|225037333|gb|EEG47579.1| hypothetical protein RUMHYD_03478 [Blautia hydrogenotrophica DSM 10507] Length = 158 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 5/161 (3%) Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160 +M+I P ++ G PF G++G +LD++L+S+ + R +I+I+ I+ HP Sbjct: 1 MGRGDLNSRIMLIAEAPGRMEDEKGIPFVGRSGEILDELLKSVSLSRDEIYITNINKCHP 60 Query: 161 PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220 PGNR+ E + C P + + LI PKI++ +G + + G W Sbjct: 61 PGNRDPEEAEQQACMPFLKYETALIRPKIMVCLGRIAARKVIA-TGFRISREHGTWIE-- 117 Query: 221 TPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 A HP L++ P + T +K+ L+ L Sbjct: 118 --RKGFFLTAVYHPSALLRDPSKVEETRRDFQEIKRKLEEL 156 >gi|148556998|ref|YP_001264580.1| uracil-DNA glycosylase superfamily protein [Sphingomonas wittichii RW1] gi|148502188|gb|ABQ70442.1| Uracil-DNA glycosylase superfamily [Sphingomonas wittichii RW1] Length = 261 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 105/255 (41%), Gaps = 10/255 (3%) Query: 8 SQEQILTIALFYADSGVYWVFDE-PNNEATYESQRKEKSIDSAIQPIT---NIRHIHSPL 63 S +I ++ ++ D+G+ + DE P + + + + P Sbjct: 12 STAEITSLMGWWEDAGLDVLVDEAPRDWLARVVPPVARPVAAVAAPAPVPAQPTVAAPIP 71 Query: 64 VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123 Q A A +L +S L + + + ++ I A+ LM++ P D Sbjct: 72 AQPAARAAAFPDTLDGFQSWLATSDEITMPMSAR--IAASGDPATGLMVLVDLPEAEDPA 129 Query: 124 SGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE 183 +G+ SG G++ DKML ++ R +++S ++P P G + + + + Sbjct: 130 NGRLLSGPAGDLFDKMLGAMGRDRQSLYLSAMAPGRPSGGFVD-PTQGALFGRLARHHVL 188 Query: 184 LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI 243 L P+ LL +G + F N + G+ ++ P + +AT HP+ L+Q+P Sbjct: 189 LAQPRALLLMGEQPSRTFLNL---GFVEARGRVHDVQLPGGAVNAVATFHPRTLLQHPQQ 245 Query: 244 KKNTWHALITLKKAL 258 K+ W L L K L Sbjct: 246 KRRAWEDLQLLMKLL 260 >gi|162148935|ref|YP_001603396.1| uracil-DNA glycosylase [Gluconacetobacter diazotrophicus PAl 5] gi|161787512|emb|CAP57108.1| Uracil-DNA glycosylase [Gluconacetobacter diazotrophicus PAl 5] Length = 433 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 41/241 (17%), Positives = 80/241 (33%), Gaps = 17/241 (7%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P +S + + L + SL L + R C Sbjct: 190 PPGTDPSALPTDRESWEGTGLTLRPADLPRPALRLTEGLDIARIDSLPALIAAARDCLIC 249 Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150 + + T+ + G LM++G P D ++ G+PF G G +LD+ L I R + Sbjct: 250 PMARQTTQTVFSDGRPGAALMLVGEQPGDQEDRVGRPFVGPAGQLLDRTLHEAGITRDAV 309 Query: 151 HISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 +++ + + + C P + + +++P++L+ +G Sbjct: 310 YVTNAVKHFRFQRRGTRRLHEKPTVENVTACAPWLAAERRIVAPRVLVMLGATAAGAVLG 369 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH------ALITLKKA 257 + + + L + L TVHP L++ P T L + Sbjct: 370 -RSVTIGRERSRPIPLADGSTG---LVTVHPSFLLRQPDEDARTREYARFVADLRLARDL 425 Query: 258 L 258 L Sbjct: 426 L 426 >gi|239834563|ref|ZP_04682891.1| uracil-DNA glycosylase, family 4 [Ochrobactrum intermedium LMG 3301] gi|239822626|gb|EEQ94195.1| uracil-DNA glycosylase, family 4 [Ochrobactrum intermedium LMG 3301] Length = 209 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 73/183 (39%), Gaps = 12/183 (6%) Query: 64 VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123 A +I+ + +L ++ + ++ C L + T+ G + + P D ++I Sbjct: 2 TSPAPAISHRQPTLEQVCAEAQTCRRCELYKDATQTVFGEGPVGAGIFFVAEQPGDKEDI 61 Query: 124 SGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRP 176 G+P G G + D L + I R + +I+ ++ S +E CR Sbjct: 62 EGRPLIGPAGQVFDACLAEVGIKRERCYITNAVKHFRHIQRGKRRLHQRPSTSHIEACRW 121 Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236 + ++IE +SP I++ +G F+ K G+ H T+HP Sbjct: 122 WLEQEIEQVSPHIIVALGAVAARAVFD-KPVKIAAVRGRCLQHENRH----VFVTIHPSY 176 Query: 237 LIQ 239 L++ Sbjct: 177 LLR 179 >gi|330813682|ref|YP_004357921.1| uracil-DNA glycosylase, family 4 [Candidatus Pelagibacter sp. IMCC9063] gi|327486777|gb|AEA81182.1| uracil-DNA glycosylase, family 4 [Candidatus Pelagibacter sp. IMCC9063] Length = 227 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 2/167 (1%) Query: 95 TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154 T+ I + + +M++G PS D + + FS +G +L KML +I I +Q++++ Sbjct: 61 TNKKIILSNKNYKSKIMVLGDMPSQKDIDNNELFSDDSGELLTKMLGAISIDSSQVYLAN 120 Query: 155 ISPWHPPGNR-NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL 213 I P++ + R I+ I I+P +L +G+ F + +N Sbjct: 121 IIPFYLTKEEGKNIKKYNSLLRKIVHEHISTINPGTILLLGSFALQTLFGEE-YSIAKNR 179 Query: 214 GKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 G+W + ++ I + + HP L++ P KK +W L L+K L N Sbjct: 180 GQWLSYSAANNSINIIPSFHPTFLLKQPSQKKKSWEDLQKLQKKLNN 226 >gi|254467751|ref|ZP_05081158.1| putative DNA polymerase related protein [Rhodobacterales bacterium Y4I] gi|206684188|gb|EDZ44674.1| putative DNA polymerase related protein [Rhodobacterales bacterium Y4I] Length = 488 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 77/219 (35%), Gaps = 17/219 (7%) Query: 52 PITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLM 111 + R + + A L + L C L + + + LM Sbjct: 260 TLPPARTARVQAAAEQAAAEHWAGPQDGLAAALAGCTRCPLHCAATQAVPGEGPQDAALM 319 Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW-------HPPGNR 164 ++G P D ++++G+PF G G +LD + + R ++++ ++ Sbjct: 320 LVGEQPGDREDLTGRPFVGPAGQLLDAVAAEAGVAREAVYLTNAVKHFKFRPQGRRRMHQ 379 Query: 165 NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS 224 E++ CR + +++L+ P++++ +G Q + G T Sbjct: 380 RPDAGEVQRCRWWLDAEVKLVRPRLIVAMGATAALALTGRGEQLMAR-RGTV---ETSRQ 435 Query: 225 IIPTLATVHPQELIQYPLIKKNTWH------ALITLKKA 257 +P L T+HP +++ P L + Sbjct: 436 GMPVLLTLHPAHILRTPDPAAQARLRGLLRGDLAAARDR 474 >gi|170690548|ref|ZP_02881715.1| phage SPO1 DNA polymerase-related protein [Burkholderia graminis C4D1M] gi|170144983|gb|EDT13144.1| phage SPO1 DNA polymerase-related protein [Burkholderia graminis C4D1M] Length = 224 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 73/202 (36%), Gaps = 11/202 (5%) Query: 48 SAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEG 107 T R P + + A + + L C L + + + Sbjct: 1 MVTTKRTPKRTPKRPSSSEGEEPAAPEVDPDQHPATLDDCRRCPLWANATQGVPGAGPRR 60 Query: 108 QDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------P 160 +M++G P D +++ G PF G G +LD L + R +++++ Sbjct: 61 APIMMVGEQPGDKEDLQGLPFVGPAGALLDDALVEAGVGRKEVYVTNAVKHFKWTPRGKR 120 Query: 161 PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220 ++ E++ CR + +++E + +++ +G + + ++GK Sbjct: 121 RMHKTPGQREVDACRYWLDQELESVGAHVIVALGATALKAVLEDPKSRLQDSIGKVIE-- 178 Query: 221 TPHSIIPTLATVHPQELIQYPL 242 H +AT HP ++ P Sbjct: 179 --HGDRLVVATYHPSFALRAPD 198 >gi|296161715|ref|ZP_06844518.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp. Ch1-1] gi|295888029|gb|EFG67844.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp. Ch1-1] Length = 214 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 34/199 (17%), Positives = 80/199 (40%), Gaps = 20/199 (10%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 Q+ SL E C L + + + +M++G P D++++ G+PF G Sbjct: 24 QQPSSLDE-------CRRCALWRNATQAVPGEGPQRASIMLVGEQPGDAEDLQGRPFVGP 76 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIEL 184 G +LDK L+ + R ++++ ++ E+E C + +++ Sbjct: 77 AGALLDKALEEAGLKRKDVYVTNAVKHFKWTPRGKRRMHKTPGQREIEACGYWLEQELRA 136 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPL 242 + ++++ +G ++ + +LGK H +AT HP ++ P Sbjct: 137 VGARVIVALGATALKAVLDDSHARLQDSLGK----TIGHGEHLVVATYHPSFALRAPDPE 192 Query: 243 IKKNTWHALITLKKALKNL 261 +++ + ++ + L Sbjct: 193 TRRHVYDTIVAALQTADKL 211 >gi|118473024|ref|YP_884681.1| uracil DNA glycosylase superfamily protein [Mycobacterium smegmatis str. MC2 155] gi|118174311|gb|ABK75207.1| uracil DNA glycosylase superfamily protein [Mycobacterium smegmatis str. MC2 155] Length = 209 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 75/171 (43%), Gaps = 10/171 (5%) Query: 86 SFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI 145 C L + + +M+IG P D ++++G PF G G +LD+ L++ +I Sbjct: 23 ECRGCGLYRDATQAVFGAGGRSARIMMIGEQPGDKEDLAGLPFVGPAGRLLDRALEAADI 82 Query: 146 MRTQIHISMISPWHPPG---------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 R ++++ ++ S E+ CRP ++ ++ + P +++ +G Sbjct: 83 DRDALYVTNAVKHFKFTRAAGGKRRIHKTPSRTEVVACRPWLIAEMTSVEPDVVVLLGAT 142 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247 ND + Q+ G+ ++ +ATVHP L++ P ++ + Sbjct: 143 AAKALLGNDFRV-TQHRGEVLHVDDVPGDPALVATVHPSSLLRGPKEERES 192 >gi|319791380|ref|YP_004153020.1| phage spo1 DNA polymerase-related protein [Variovorax paradoxus EPS] gi|315593843|gb|ADU34909.1| phage SPO1 DNA polymerase-related protein [Variovorax paradoxus EPS] Length = 228 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 74/193 (38%), Gaps = 18/193 (9%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L +L + +C L + ++ LM++G P D ++++G+PF G G + Sbjct: 15 LRKLGDATDACRECPLGERATQSVFGEGPVHARLMVVGEQPGDKEDLAGRPFVGPAGRLF 74 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKI 189 D+ + + R +++++ ++ + E + C + +I L+ P Sbjct: 75 DRAVAELGWSRDRLYVTNAVKHFKYELRGKRRIHKTPAQREADACHHWLESEIALVEPVA 134 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ-YPLIKKNTW 248 LL +G + G+W + L T+HP L++ P + W Sbjct: 135 LLALGAVAARSLLGRHVAVMSE-RGRWHE---DAAGRRVLVTLHPSALLRGDPEQRDAAW 190 Query: 249 HALITLKKALKNL 261 K L +L Sbjct: 191 ------KAWLDDL 197 >gi|170734559|ref|YP_001773673.1| phage SPO1 DNA polymerase-related protein [Burkholderia cenocepacia MC0-3] gi|169820597|gb|ACA95178.1| phage SPO1 DNA polymerase-related protein [Burkholderia cenocepacia MC0-3] Length = 223 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 69/191 (36%), Gaps = 18/191 (9%) Query: 57 RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYT 116 + P Q +L + C L + + +M++G Sbjct: 4 KTPDRPAPTQQPPDDDAPATLD-------ACRRCALWEHATQPVPGAGPVDAPIMLVGEQ 56 Query: 117 PSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPGNRNLS----NI 169 P D ++ +G PF G G MLD+ L I R Q++++ W P G R L Sbjct: 57 PGDQEDRAGLPFVGAAGRMLDRALDEAGIERAQVYLTNAVKHFKWEPRGKRRLHKTPAQR 116 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E+ C + R+++ + P++++ +G ++ + + Sbjct: 117 EVAACHYWLERELQAVQPRLVVALGATALRAVLQDNDATLERTRAPVRT----EDGRLVV 172 Query: 230 ATVHPQELIQY 240 AT HP +++ Sbjct: 173 ATYHPSYVLRT 183 >gi|307729968|ref|YP_003907192.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp. CCGE1003] gi|307584503|gb|ADN57901.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp. CCGE1003] Length = 490 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 85/224 (37%), Gaps = 17/224 (7%) Query: 46 IDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQT 105 S + + + + + A+ A L E S L + C L + + Sbjct: 259 ARSGARRLAQASGVAAFNGKAISVEAEVAQPLREQPSSLDACRRCDLWRHATQAVGGVGP 318 Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPG 162 +M+IG P D +++SG+PF G G +L+ + + R Q++++ W P G Sbjct: 319 RDARIMVIGEQPGDHEDLSGQPFVGPAGQLLNSAITQAGLRREQLYLTNAVKHFKWEPRG 378 Query: 163 NRNLS----NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218 R L EM+ C + +++E + P +++ +G N + G Sbjct: 379 KRRLHKTAAQREMQACSHWLTQELETVRPSVVVTLGTTALNALLGEKSSLQDYLHGP-FE 437 Query: 219 LCTPHSIIPTLATVHPQELIQYPLIKKNTWHA--LITLKKALKN 260 L +AT HP ++ + ++ ++ AL Sbjct: 438 LEGGWG----IATYHPSFALRQQS---DAARDKVMVAIRNALSE 474 >gi|158421875|ref|YP_001523167.1| phage SPO1 DNA polymerase-related protein [Azorhizobium caulinodans ORS 571] gi|158328764|dbj|BAF86249.1| phage SPO1 DNA polymerase-related protein [Azorhizobium caulinodans ORS 571] Length = 197 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 71/184 (38%), Gaps = 17/184 (9%) Query: 86 SFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI 145 + C L + T+ LM++G P D ++ G PF G G +LD+ L++ I Sbjct: 16 NCIRCPLYRDATQTVFGEGAADAPLMLVGEQPGDQEDRKGHPFVGPAGGVLDRALEAAGI 75 Query: 146 MRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTK 198 R ++++ ++ + E+ CR + R++ L+ P +++ +G Sbjct: 76 ARGAVYVTNAVKHFKFERRGKRRLHKGPNAGEIAACRWWLDRELALVRPSLVVALGASAA 135 Query: 199 NFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW------HALI 252 + A + G+ + L T HP +++ P + L+ Sbjct: 136 HALLG-RAVTISRTRGRVMEASGD---VRLLVTTHPSAILRVPDAEARAKAFDALVADLV 191 Query: 253 TLKK 256 ++ Sbjct: 192 VARE 195 >gi|255261284|ref|ZP_05340626.1| uracil-DNA glycosylase superfamily protein [Thalassiobium sp. R2A62] gi|255103619|gb|EET46293.1| uracil-DNA glycosylase superfamily protein [Thalassiobium sp. R2A62] Length = 475 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 71/169 (42%), Gaps = 11/169 (6%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 L + +R+ C L + + + LMI+G P D +++ G+PF G G + D Sbjct: 277 AGLPAAIRNCARCELACHATQAVLGEGPKTAPLMIVGEQPGDKEDLQGRPFVGPAGQLFD 336 Query: 138 KMLQSIEIMRTQIHISMISPW-------HPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 ++ + + + R+Q +++ ++ + E++ CR + ++ ++P+++ Sbjct: 337 EIAEEVGLDRSQAYVTNAVKHFKFKAQGRRRIHQRPNRSEIDQCRWWLDAEVRRVAPRLI 396 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 + +G + + G P L T+HP +++ Sbjct: 397 VAMGATAAEALTG-NGDAILKRRGTV---QIADGHPPVLITLHPSYILR 441 >gi|108799959|ref|YP_640156.1| phage SPO1 DNA polymerase-related protein [Mycobacterium sp. MCS] gi|119869069|ref|YP_939021.1| phage SPO1 DNA polymerase-related protein [Mycobacterium sp. KMS] gi|108770378|gb|ABG09100.1| phage SPO1 DNA polymerase-related protein [Mycobacterium sp. MCS] gi|119695158|gb|ABL92231.1| phage SPO1 DNA polymerase-related protein [Mycobacterium sp. KMS] Length = 230 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 81/218 (37%), Gaps = 21/218 (9%) Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120 V A+ + L +++ C L + + + +M +G P D Sbjct: 2 PTKVPGAEDFVPDTRDVSILADAVQACRGCELYRDATQGVFGQGSANATVMFVGEQPGDQ 61 Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG---------NRNLSNIEM 171 ++ +G+PF G G +LDK L S I R ++++ ++ S E+ Sbjct: 62 EDRAGEPFVGPAGRLLDKALVSAGIDRDGVYVTNAVKHFKFTLPERGKRRIHKTPSRTEV 121 Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS------NLCTPHSI 225 CRP ++ +++ + P++++ +G ND + T G+ H Sbjct: 122 VACRPWLLAELDAVRPEVVVLLGATAAKALLGNDFRLTAH-RGEVLALPPVTEPADLHVD 180 Query: 226 IPTLATVHPQELIQYPLIKKN-----TWHALITLKKAL 258 + T HP +++ P + L + + + Sbjct: 181 PAVVVTAHPSSVLRGPAENRQQAFDALVEDLRVVARLM 218 >gi|87200055|ref|YP_497312.1| uracil-DNA glycosylase superfamily protein [Novosphingobium aromaticivorans DSM 12444] gi|87135736|gb|ABD26478.1| Uracil-DNA glycosylase superfamily [Novosphingobium aromaticivorans DSM 12444] Length = 476 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 78/250 (31%), Gaps = 19/250 (7%) Query: 24 VYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSL 83 V + E + + + + Q + + S+ + + Sbjct: 231 VGAMLKEMPRKYWKNMPEAALIPELIAGAQSREARMVQAGEQ---DLGETPVSIDAIGAA 287 Query: 84 LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143 + + C + + LMIIG P + + G+PF G G +L L+ Sbjct: 288 ILACRRCDIGCNGTRAVMGEGPHDAALMIIGEQPGEQEEAQGRPFVGPAGQLLRTHLEHA 347 Query: 144 EIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 I + +++ ++N S E+++CR + + L+ P+++L +G Sbjct: 348 GIPAERAYVTNAVKHFKFMPQGKRRLHQNPSAREIDVCRWWLEGERGLVRPRLILALGAS 407 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ-----YPLIKKNTWHAL 251 + G L T HP L++ + + L Sbjct: 408 AARSLLGRTVSVQ-KVRGAPHVL---DDGSELWITTHPSYLLRLDDGGRSEEEARFSNDL 463 Query: 252 ITLKKALKNL 261 + L + Sbjct: 464 QKVAARLSQI 473 >gi|115360375|ref|YP_777512.1| phage SPO1 DNA polymerase-related protein [Burkholderia ambifaria AMMD] gi|115285703|gb|ABI91178.1| phage SPO1 DNA polymerase-related protein [Burkholderia ambifaria AMMD] Length = 217 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 67/179 (37%), Gaps = 11/179 (6%) Query: 69 SIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128 + A+ A + + L + C L + + +M++G P D ++ +G PF Sbjct: 5 APAKPAAPHDQAPATLDACRRCGLWEHATQPVPGAGPTDARIMLVGEQPGDQEDRTGIPF 64 Query: 129 SGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQ 181 G G MLD+ L I R ++++ ++ + E+ C + R+ Sbjct: 65 VGAAGRMLDRALDEAGIERASVYVTNAVKHFKWEPRGKRRMHKTPAQREVAACHYWLERE 124 Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 + + P++++ +G ++ + +AT HP +++ Sbjct: 125 LAALGPRVIVALGATALRAVLQDNNATLERTRQPVR----SPDGCLVVATYHPSYVLRT 179 >gi|304393847|ref|ZP_07375772.1| uracil-DNA glycosylase:Phage SPO1 DNA polymerase-related protein [Ahrensia sp. R2A130] gi|303294046|gb|EFL88421.1| uracil-DNA glycosylase:Phage SPO1 DNA polymerase-related protein [Ahrensia sp. R2A130] Length = 516 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 37/248 (14%), Positives = 88/248 (35%), Gaps = 29/248 (11%) Query: 27 VFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRS 86 + + + + + A+ + + + A L L +L++ Sbjct: 253 LIKSARERENMMVESEPTAPNPALMRNREMPVPTDGFIHELPPQAPL-NDLGSLNDMLKN 311 Query: 87 FHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM 146 C L + T+C T+ +M++G P D++++ G+ F G G +L+ + + I Sbjct: 312 CRACPLWQPATQTVCGAGTQRASIMLVGEQPGDNEDLQGQAFIGPAGKILEAAFEEVGID 371 Query: 147 RTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199 R ++ ++N S E++ C + R++ L+ P++++ +G Sbjct: 372 RADTWLTNAVKHFKFEPRGKRRIHQNPSVGEIDHCSWWLQRELALVQPRVVVALGASAVR 431 Query: 200 FFFNNDAQKTYQNLGKWSNLCT--------------------PHSIIPTLATVHPQELIQ 239 K G + L + + + +AT HP +++ Sbjct: 432 GLTG-KTHKLGDLRGNATPLASLMKKGRELPLELSGLGGNGANDTGVQLVATYHPSYILR 490 Query: 240 YPLIKKNT 247 P + Sbjct: 491 VPNEQARA 498 >gi|258405319|ref|YP_003198061.1| phage SPO1 DNA polymerase-like protein [Desulfohalobium retbaense DSM 5692] gi|257797546|gb|ACV68483.1| phage SPO1 DNA polymerase-related protein [Desulfohalobium retbaense DSM 5692] Length = 258 Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 67/174 (38%), Gaps = 3/174 (1%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L L+ + + C L T + + LMI+ P D ++ G+ F G +G + Sbjct: 5 LERLRDQITACRRCDLAETRTNALPGAGNIHARLMIVAQAPGDQEDREGRHFIGPSGRVF 64 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 D++L + R ++ ++ + P NR E+ C P + ++I+++ IL+ +G Sbjct: 65 DRLLDQAGVARAELFLTNLLKCRLPKNRRPKQREIIACLPFLEQEIDIVEADILVPLGFY 124 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTP---HSIIPTLATVHPQELIQYPLIKKNT 247 + + Q + + HP L+ P ++ Sbjct: 125 ATRAVLDLNVLPFPQAKAESPESFGRVQWNGRKKVFPLPHPAALLYNPAFEEAA 178 >gi|172065650|ref|YP_001816362.1| phage SPO1 DNA polymerase-related protein [Burkholderia ambifaria MC40-6] gi|171997892|gb|ACB68809.1| phage SPO1 DNA polymerase-related protein [Burkholderia ambifaria MC40-6] Length = 217 Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 66/170 (38%), Gaps = 11/170 (6%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 E + L + C L + + +M++G P D ++ +G PF G G MLD Sbjct: 14 DEAPATLDACRRCGLWEHATQPVPGAGPTDARIMLVGEQPGDQEDRTGIPFVGAAGRMLD 73 Query: 138 KMLQSIEIMRTQIHISMIS---PWHPPGNRNLS----NIEMEICRPIIMRQIELISPKIL 190 + L I R ++++ W P G R L E+ CR + R++ + P+++ Sbjct: 74 RALDEAGIERASVYVTNAVKHFKWEPRGKRRLHKTPAQREVAACRYWLERELAALGPRVI 133 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 + +G ++ + +AT HP +++ Sbjct: 134 VALGATALRAVLQDNDATLERTRQPVR----SPDGCLVVATYHPSYVLRT 179 >gi|325109833|ref|YP_004270901.1| phage SPO1 DNA polymerase-related protein [Planctomyces brasiliensis DSM 5305] gi|324970101|gb|ADY60879.1| phage SPO1 DNA polymerase-related protein [Planctomyces brasiliensis DSM 5305] Length = 461 Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 88/227 (38%), Gaps = 11/227 (4%) Query: 35 ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94 E++ + + A + ++ L + A + +L L++ C L Sbjct: 226 TLPEAELIPELLAEAEARVKDMVSRQEGLHKSAADFLPEVRTLQNLRAQAAVCTGCELHG 285 Query: 95 TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154 + T+ +E L +G P D ++++G+PF G G +L +M+Q + ++++++ Sbjct: 286 PATQTVFGMGSEHARLAFVGEQPGDEEDLAGEPFVGPAGRLLREMMQQTNVDPSEVYLTN 345 Query: 155 ISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207 ++ + E+ C+P + +++ + P LL +G + D + Sbjct: 346 TVKHFKYVQTGPRRLHKKPGSREITACKPWLEAELQYLKPAGLLLLGATSAQAVLGRDFR 405 Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 GK I AT HP +++ P + L L Sbjct: 406 L-SDQRGKTVESRWCRHTI---ATWHPAAILRAPTPARQKEMQLQLL 448 >gi|269837406|ref|YP_003319634.1| phage SPO1 DNA polymerase-like protein [Sphaerobacter thermophilus DSM 20745] gi|269786669|gb|ACZ38812.1| phage SPO1 DNA polymerase-related protein [Sphaerobacter thermophilus DSM 20745] Length = 209 Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 82/202 (40%), Gaps = 16/202 (7%) Query: 68 DSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127 + IA ++ + +++ + + + + DL++IG P + G P Sbjct: 5 EEIAARSRRMEQIRRAMLAAPEFATYCNEKRPVFGEGALTADLVLIGEAPGGCEERLGHP 64 Query: 128 FSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG--------NRNLSNIEMEICRPIIM 179 F G G +L + L I R + I+ + P NR + E+E RP ++ Sbjct: 65 FVGPAGQVLTEALAQAGIDREDLWITNVVKCRPTMEGVGGRLRNRTPTPAEVEWFRPWLL 124 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 R++++I P+ ++ +G + + A + + G W + + +PTL T HP L++ Sbjct: 125 RELDVIDPRAIVCLGATAGSAVL-HRALRITRERGIWFD---GPNGLPTLVTYHPAYLLR 180 Query: 240 YPLIKK----NTWHALITLKKA 257 + L T + Sbjct: 181 RTQDRDDRFGEFIDDLRTAGER 202 >gi|134291140|ref|YP_001114909.1| phage SPO1 DNA polymerase-related protein [Burkholderia vietnamiensis G4] gi|134134329|gb|ABO58654.1| phage SPO1 DNA polymerase-related protein [Burkholderia vietnamiensis G4] Length = 239 Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 76/199 (38%), Gaps = 13/199 (6%) Query: 49 AIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQ 108 + + P AD+ A + + L + C L + + Sbjct: 9 PTHAAQHAKPSQRPQPDPADTHGGDAD--DDAPATLDACRRCGLWEHATQPVPGAGPADA 66 Query: 109 DLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPGNRN 165 +M++G P D ++ +G PF G G MLD+ L I R +++++ W P G R Sbjct: 67 RIMLVGEQPGDQEDRTGVPFVGAAGRMLDRALDEAGIDRARVYVTNAVKHFKWEPRGKRR 126 Query: 166 LS----NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221 L E+ CR + R++E ++P++++ +G ++ + Sbjct: 127 LHKTPAQREVAACRYWLERELETLAPRVIVALGATALRAVLQDNDATLERARQPLR---- 182 Query: 222 PHSIIPTLATVHPQELIQY 240 +AT HP +++ Sbjct: 183 SPGGRLVVATHHPSYVLRT 201 >gi|110677624|ref|YP_680631.1| uracil-DNA glycosylase, putative [Roseobacter denitrificans OCh 114] gi|109453740|gb|ABG29945.1| uracil-DNA glycosylase, putative [Roseobacter denitrificans OCh 114] Length = 479 Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 72/209 (34%), Gaps = 11/209 (5%) Query: 38 ESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL 97 S + + P I + QQA + L + C L T+ Sbjct: 243 ASAPERARQMALAAPTLPPTRISAIQAQQAAHESVWDGPPGSLPKAIAGCTRCPLHKTAT 302 Query: 98 STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP 157 + LMI+G P D +++ G+PF G G + D + + R ++ I+ Sbjct: 303 QAVPGEGPLDARLMIVGEQPGDQEDLIGRPFVGPAGQLFDSIAADAGLDRGKVFITNAVK 362 Query: 158 W-------HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210 ++ + E+ C+ + ++ ++P L+ T + Sbjct: 363 HFKFTPRGRKRIHQRPNQGEVAHCKWWLDAELREVAP-DLVVAMGATAAAALTGSGKAIS 421 Query: 211 QNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 G+ T + IP L T HP L++ Sbjct: 422 ARRGRI---ETGEAGIPVLITWHPSYLLR 447 >gi|126435587|ref|YP_001071278.1| phage SPO1 DNA polymerase-related protein [Mycobacterium sp. JLS] gi|126235387|gb|ABN98787.1| phage SPO1 DNA polymerase-related protein [Mycobacterium sp. JLS] Length = 229 Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 83/219 (37%), Gaps = 21/219 (9%) Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120 V A+ + L +++ C L + + + +M +G P D Sbjct: 2 PTKVPGAEDFVPDTRDVSILADAVQACRGCELYRDATQGVFGQGSADATVMFVGEQPGDR 61 Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG---------NRNLSNIEM 171 ++ +G+PF G G +LDK L S I R ++++ ++ S E+ Sbjct: 62 EDRAGEPFVGPAGRLLDKALVSAGIDRDGVYVTNAVKHFKFTLPERGKRRIHKTPSRTEV 121 Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS------NLCTPHSI 225 CRP ++ +++ + P++++ +G ND + T + G+ Sbjct: 122 VACRPWLLAELDAVRPEVVVLLGATAAKALLGNDFRLTAR-RGEVLALPPVTEPADLDVD 180 Query: 226 IPTLATVHPQELIQYPLIKKN-----TWHALITLKKALK 259 +AT HP +++ P + L + + ++ Sbjct: 181 PAVVATAHPSSVLRGPAENRQQAFDALVEDLRVVARLMR 219 >gi|158522520|ref|YP_001530390.1| uracil-DNA glycosylase superfamily protein [Desulfococcus oleovorans Hxd3] gi|158511346|gb|ABW68313.1| Uracil-DNA glycosylase superfamily [Desulfococcus oleovorans Hxd3] Length = 227 Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 71/174 (40%), Gaps = 9/174 (5%) Query: 85 RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIE 144 + C L S S + LM++ +P +G PFSG G + ++L +++ Sbjct: 63 QGCDQCPLASAGPSPVHGRGPSLARLMVVSDSP----LGAGDPFSGNEGELFTRILLAMK 118 Query: 145 IMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204 + ++ ++ + P N + + CR + +I + P ++ +G Sbjct: 119 LAPDRVFVTAMVRCPVPENAKPAPRALVACRAFLEEEIRKVKPTVIWVMGETAAQALLGA 178 Query: 205 DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 D G++ + IP + T HP++++ P +K+ W + + K L Sbjct: 179 DDPL-DHLRGRFHDYQN----IPVMPTWHPRDILSDPSLKRPVWDDVQQIMKFL 227 >gi|84515694|ref|ZP_01003055.1| hypothetical protein SKA53_13631 [Loktanella vestfoldensis SKA53] gi|84510136|gb|EAQ06592.1| hypothetical protein SKA53_13631 [Loktanella vestfoldensis SKA53] Length = 475 Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 75/216 (34%), Gaps = 11/216 (5%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P E++ + + + + SL + + C Sbjct: 238 PAMLKDAEARVQRMRAAGSTPARPGAAAVSTRYRAAMPQAVNLPDSLDQAREAALQCRRC 297 Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150 LC + T+ T +G LMI+G P D +++ GKPF G G +L + + + + Sbjct: 298 TLCEKATQTVWGTGAQGAALMIVGEQPGDREDLEGKPFVGPAGQILQQAMAAAGVDPAAT 357 Query: 151 HISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 ++ +++ E++ CR + ++ + PK+ + +G Sbjct: 358 WLTNAVKHFKFTARGKRRMHQSPDRAEIDHCRWWLGLELGFVQPKLTVALGATAAYALTG 417 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 +A G+ P L T HP +++ Sbjct: 418 -NAAPMADRQGRIEQGLHNG---PVLVTWHPSYILR 449 >gi|296169122|ref|ZP_06850781.1| family 4 uracil-DNA glycosylase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896242|gb|EFG75904.1| family 4 uracil-DNA glycosylase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 220 Score = 125 bits (313), Expect = 7e-27, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 77/203 (37%), Gaps = 18/203 (8%) Query: 67 ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126 AD L L++ C L + + T+ G +M++G P D ++ +G+ Sbjct: 9 ADRYLPAERGLDALRAAAECCRGCQLFADATQTVFGRGRAGAPIMLVGEQPGDREDRAGE 68 Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG--------NRNLSNIEMEICRPII 178 PF G G +LD+ L+ I + + ++ E+ CRP + Sbjct: 69 PFVGPAGRLLDRALEEAGIDPACTYETNAVKHFKFTRKGGKRRIHQKPGRTEVVACRPWL 128 Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP----TLATVHP 234 + +IE + P++++ +G A + G+ L + + +ATVHP Sbjct: 129 IAEIEAVRPRVIVCLGATAAQSLLGA-AFRVSAERGRQLRLPAALADVEPEPVVVATVHP 187 Query: 235 QELIQYPLIK-----KNTWHALI 252 +++ + + L Sbjct: 188 SAVLRDRSDRHDEAYRLFVDDLR 210 >gi|227498884|ref|ZP_03929024.1| uracil-DNA glycosylase [Acidaminococcus sp. D21] gi|226904336|gb|EEH90254.1| uracil-DNA glycosylase [Acidaminococcus sp. D21] Length = 212 Score = 125 bits (313), Expect = 7e-27, Method: Composition-based stats. Identities = 43/189 (22%), Positives = 77/189 (40%), Gaps = 10/189 (5%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L+ + C L ++ + L+I+G P ++ G P G +G Sbjct: 2 EELDILQRKMEDCTACPLRGDCIAPVGWFGDPHSPLVIVGEGPGGVEDDYGCPLIGPSGQ 61 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPII-MRQIELISPKILLFI 193 +LDK L S++I R + + + P NR + E C I ++ LI+PK+++ + Sbjct: 62 LLDKALWSVKITRDHVLTTNVIKCRPRNNRTPTPEEAAFCAHRILDEELRLIAPKVIIAL 121 Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ-----YPLIKKNTW 248 G +F +A + + G+W + +AT HP L++ K + Sbjct: 122 GGVALKYFKGPEA-RITKERGQWFRT---NQGFDAIATFHPSYLLRLSGKAQIDAKWQVF 177 Query: 249 HALITLKKA 257 H L K Sbjct: 178 HDLEAAKAK 186 >gi|110667342|ref|YP_657153.1| uracil-DNA glycosylase-like protein [Haloquadratum walsbyi DSM 16790] gi|109625089|emb|CAJ51508.1| uracil-DNA glycosylase homolog [Haloquadratum walsbyi DSM 16790] Length = 232 Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 74/185 (40%), Gaps = 4/185 (2%) Query: 60 HSPLVQQADSIAQKACSLHELKSLLRSFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPS 118 S + A A +++ L + + C L + + +L+ IG P Sbjct: 11 TSSDLNTATDAPGSASTVNGLD--VTACKRCQGLVESRSQIVNGVGPADAELVFIGEAPG 68 Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPII 178 +++ G+PF G++G++LD L + R I I+ PP NRN + E+ CR + Sbjct: 69 ANEDEYGEPFVGRSGDVLDDALNEAGVSRDSIRITNCVRCRPPENRNPTTEELSNCRRYL 128 Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238 ++ ++P +++ +G + T G +++ + +VHP + Sbjct: 129 EHELSALNPAVIVTLGKVPSEHLLDRQIAVTTAA-GDVTDVRLGDQSYRVIISVHPAATL 187 Query: 239 QYPLI 243 Sbjct: 188 YDQSQ 192 >gi|107022916|ref|YP_621243.1| phage SPO1 DNA polymerase-related protein [Burkholderia cenocepacia AU 1054] gi|116686841|ref|YP_840088.1| phage SPO1 DNA polymerase-related protein [Burkholderia cenocepacia HI2424] gi|105893105|gb|ABF76270.1| phage SPO1 DNA polymerase-related protein [Burkholderia cenocepacia AU 1054] gi|116652556|gb|ABK13195.1| phage SPO1 DNA polymerase-related protein [Burkholderia cenocepacia HI2424] Length = 223 Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 67/191 (35%), Gaps = 18/191 (9%) Query: 57 RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYT 116 + + +L + C L + + +M++G Sbjct: 4 KTPDRQAPTRQPPDDDAPATLD-------ACRRCALWEHATQPVPGAGPVDAPIMLVGEQ 56 Query: 117 PSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPGNRNLS----NI 169 P D ++ +G PF G G MLD+ L I R ++++ W P G R L Sbjct: 57 PGDQEDRAGLPFVGAAGRMLDRALDEAGIERAHVYLTNAVKHFKWEPRGKRRLHKTPAQR 116 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E+ C + R+++ + P++++ +G ++ + + Sbjct: 117 EVAACHYWLERELQAVQPRVVVALGATALRAVLQDNDATLERTRAPVRT----EDGRLVV 172 Query: 230 ATVHPQELIQY 240 AT HP +++ Sbjct: 173 ATYHPSYVLRT 183 >gi|237756256|ref|ZP_04584815.1| uracil-DNA glycosylase, family 4 [Sulfurihydrogenibium yellowstonense SS-5] gi|237691575|gb|EEP60624.1| uracil-DNA glycosylase, family 4 [Sulfurihydrogenibium yellowstonense SS-5] Length = 161 Score = 124 bits (312), Expect = 9e-27, Method: Composition-based stats. Identities = 38/140 (27%), Positives = 68/140 (48%) Query: 60 HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSD 119 L Q++ + K L+++ + C L + + +M IG P + Sbjct: 22 KPILNQKSSNQIDKIEELNKIFEETKVCTKCDLHKNRTNPVLGEGNINAKIMFIGEAPGE 81 Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIM 179 ++ G+PF GK G +L K +++ R +++I+ I+ PP NR + E E C P ++ Sbjct: 82 EEDKQGRPFVGKAGKLLTKCIENAGYRREEVYIANINKCRPPNNRTPTIEEQEACIPYLL 141 Query: 180 RQIELISPKILLFIGNKTKN 199 RQIE+I+PK+L +G Sbjct: 142 RQIEIINPKVLCLLGATAYR 161 >gi|221198651|ref|ZP_03571696.1| uracil-DNA glycosylase, family 4 [Burkholderia multivorans CGD2M] gi|221207882|ref|ZP_03580889.1| uracil-DNA glycosylase, family 4 [Burkholderia multivorans CGD2] gi|221172379|gb|EEE04819.1| uracil-DNA glycosylase, family 4 [Burkholderia multivorans CGD2] gi|221181102|gb|EEE13504.1| uracil-DNA glycosylase, family 4 [Burkholderia multivorans CGD2M] Length = 258 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 78/198 (39%), Gaps = 12/198 (6%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELK-SLLRSFHDCHLCSTSLSTICATQTEGQD 109 + + +A S + + + + + L + C L + + T Sbjct: 27 ARAPRAGMRSAGAMTRAASASGADDTPDDQRPATLDACRRCGLWEHATQPVPGTGPRHAS 86 Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPGNRNL 166 ++++G P D ++ +G PF G G++LD+ L + I R ++++ W P G R L Sbjct: 87 IVLVGEQPGDQEDRTGVPFVGAAGHVLDRALDAAGIDRRSVYLTNAVKHFKWEPRGKRRL 146 Query: 167 S----NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP 222 E+ CR + R++E + P++++ +G ++ + Sbjct: 147 HKTPAQREITACRYWLDRELESVHPRVIVALGGTALRAVLQDNDATLQRTPTPTRTAQ-- 204 Query: 223 HSIIPTLATVHPQELIQY 240 +AT HP +++ Sbjct: 205 --GYLVVATYHPSYVLRT 220 >gi|302543469|ref|ZP_07295811.1| uracil-DNA glycosylase, family 4 [Streptomyces hygroscopicus ATCC 53653] gi|302461087|gb|EFL24180.1| uracil-DNA glycosylase, family 4 [Streptomyces himastatinicus ATCC 53653] Length = 216 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 73/217 (33%), Gaps = 16/217 (7%) Query: 56 IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115 + A L L+ C L + T+ ++++G Sbjct: 3 PGTAPEDAYTAEPFVPGGAG-LDALREAAAGCRGCPLHREASQTVFGAGAPDARVVLVGE 61 Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG----------NRN 165 P D ++ G+PF G G +L + L + + +I+ ++ Sbjct: 62 QPGDQEDRQGRPFVGPAGKVLTRALDEAGVDPDETYITNAVKHFKFTVVPERGKRRIHKP 121 Query: 166 LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI 225 S EM CRP + ++ +I P++++ +G + + G Sbjct: 122 PSLREMTACRPWLAAEVHVIDPEVIVALGATAGKALLGPSFRV-TKQRGMLLPCPALD-G 179 Query: 226 IPTLATVHPQELIQYPLIK---KNTWHALITLKKALK 259 LAT+HP +++ + + L + + L+ Sbjct: 180 HEMLATIHPSAVLRADDREAVYRGLVSDLRVVAETLR 216 >gi|78779060|ref|YP_397172.1| phage SPO1 DNA polymerase-related protein [Prochlorococcus marinus str. MIT 9312] gi|78712559|gb|ABB49736.1| phage SPO1 DNA polymerase-related protein [Prochlorococcus marinus str. MIT 9312] Length = 167 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 11/168 (6%) Query: 97 LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI-MRTQIHISMI 155 + + DL+IIG P +++ GKP+ GK+G +L+++L I + ++ + Sbjct: 2 KRLVIGRGSVFADLLIIGEAPGAQEDLEGKPYVGKSGKLLNELLIKAGIDYKEDVYFCNV 61 Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK 215 PP NR + E+ I +P +++QI+L+ PK +L G+ G+ Sbjct: 62 IKCRPPNNRKPTAREINIHKPWLLQQIKLVDPKFILLTGSTAMRAILEVK-DPISNLRGQ 120 Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLIK-----KNTWHALITLKKAL 258 W + HP L+++P + T L L L Sbjct: 121 W----IKKDGREIMVIFHPSYLLRFPSKEINKPYHLTLKDLENLGGKL 164 >gi|326333079|ref|ZP_08199329.1| uracil-DNA glycosylase, family 4 [Nocardioidaceae bacterium Broad-1] gi|325949131|gb|EGD41221.1| uracil-DNA glycosylase, family 4 [Nocardioidaceae bacterium Broad-1] Length = 210 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 81/210 (38%), Gaps = 16/210 (7%) Query: 66 QADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISG 125 A ++ +L EL+S ++ C L + + LM++G P D ++ G Sbjct: 2 SAAEWVPESPTLAELRSAVQDCRGCELYRDATQGVMGEGPTPAPLMLLGEQPGDREDREG 61 Query: 126 KPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPII 178 +PF G G +L + L I + + + +++ ++ ++ C P + Sbjct: 62 EPFVGPAGGILHEALADAGIDPEATYTTNVVKHFRHRLSGKRRIHQSPTSKQVGACAPWL 121 Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC----TPHSIIPTLATVHP 234 +++L+ P ++ +G F + + + G + T LAT HP Sbjct: 122 AAELDLVRPTGVVLLGGTAGKALFGSSFRV-GEARGHLLDWPEAITTATLDPWVLATTHP 180 Query: 235 QELIQYPLIKKNTWH----ALITLKKALKN 260 +++ ++ T+ L ALK Sbjct: 181 SAVLRAEDERQATYDGLVADLKVAAAALKK 210 >gi|323527938|ref|YP_004230090.1| phage SPO1 DNA polymerase-like protein [Burkholderia sp. CCGE1001] gi|323384940|gb|ADX57030.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp. CCGE1001] Length = 228 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 73/199 (36%), Gaps = 11/199 (5%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 + + + + AQ + + L C L + + + + Sbjct: 8 SKRASKQTTKPTSQTEGEIPAQAEVDPDQQPATLDDCRRCPLWANATQGVPGAGPRRAPI 67 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGN 163 M++G P D +++ G PF G G +LD L + R ++++ + Sbjct: 68 MMVGEQPGDKEDLQGLPFVGPAGALLDDALVEAGVGRKDVYVTNAVKHFKWTPRGKRRMH 127 Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH 223 + + E++ CR + +++E + ++++ +G + + +GK H Sbjct: 128 KTPAQREVDACRYWLDQELESVGAQVIVALGATALKAVLEDPKSRLQDAIGKVIE----H 183 Query: 224 SIIPTLATVHPQELIQYPL 242 +AT HP ++ P Sbjct: 184 GDRLVVATYHPSFALRAPD 202 >gi|290955519|ref|YP_003486701.1| DNA polymerase related protein [Streptomyces scabiei 87.22] gi|260645045|emb|CBG68131.1| putative DNA polymerase related protein [Streptomyces scabiei 87.22] Length = 227 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 67/171 (39%), Gaps = 13/171 (7%) Query: 81 KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML 140 + C L + T+ L+++G P D ++ G+PF G G +L + L Sbjct: 31 RRAAADCRGCPLWEHATQTVFGKGDAAARLLLVGEQPGDREDRQGEPFVGPAGRLLRRAL 90 Query: 141 QSIEIMRTQIHISMISPW----------HPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 + I +++ ++ E+ CRP ++ ++ L+ P+++ Sbjct: 91 EEAGIDMDTAYVTNAVKHFKSTRPPGGGRRRIHQAPDLREVAACRPWLLAELRLVRPEVV 150 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS--IIPTLATVHPQELIQ 239 + +G + ++ G +L + + +AT+HP +++ Sbjct: 151 VVLGATAGRALLGPSFRV-TRDRGALLSLPSEGTEAGPRVVATLHPSAVLR 200 >gi|209545310|ref|YP_002277539.1| Uracil-DNA glycosylase superfamily [Gluconacetobacter diazotrophicus PAl 5] gi|209532987|gb|ACI52924.1| Uracil-DNA glycosylase superfamily [Gluconacetobacter diazotrophicus PAl 5] Length = 428 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 42/241 (17%), Positives = 81/241 (33%), Gaps = 17/241 (7%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P A +S + + L + SL L + R C Sbjct: 185 PPGTAPSALPTDRESWEGTGLTLRPADLPRPALRLTEGLDIARIDSLPALIAAARDCLIC 244 Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150 + + T+ + G LM++G P D ++ G+PF G G +LD+ L I R + Sbjct: 245 AMARQTTQTVFSDGRPGAALMLVGEQPGDQEDRVGRPFVGPAGQLLDRALHEARITRDAV 304 Query: 151 HISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 +++ + + + C P + + +++P++L+ +G Sbjct: 305 YVTNAVKHFRFQRRGTRRLHEKPTVENVTACAPWLAAERRIVAPRVLVMLGATAAGAVLG 364 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH------ALITLKKA 257 + + + L + L TVHP L++ P T L + Sbjct: 365 -RSVTIGRERSRPIPLADGSTG---LVTVHPSFLLRQPDEDARTREYARFVADLRLARDL 420 Query: 258 L 258 L Sbjct: 421 L 421 >gi|326387893|ref|ZP_08209499.1| uracil-DNA glycosylase superfamily protein [Novosphingobium nitrogenifigens DSM 19370] gi|326207939|gb|EGD58750.1| uracil-DNA glycosylase superfamily protein [Novosphingobium nitrogenifigens DSM 19370] Length = 475 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 34/248 (13%), Positives = 78/248 (31%), Gaps = 19/248 (7%) Query: 24 VYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSL 83 V + E + + + A +L +L++ Sbjct: 234 VGAMVKEMPRRYWKNLPEAALIPELVATAQAREAAMVALGGNDAP---PAPETLADLEAA 290 Query: 84 LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143 + + C + + + +MI+G P D + G+PF G G +L + Sbjct: 291 VGACRRCAIGCNGTRAVAGEGPDRARVMIVGEQPGDCEERDGRPFIGPAGQVLRSCADAA 350 Query: 144 EIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 + + ++ ++N S E++ CR + + +++P+++L +G Sbjct: 351 GLDLASVRLTNAVRHFRFVARGKVRLHQNPSAREIDTCRWWLDAERRIVAPRLVLALGAS 410 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ-----YPLIKKNTWHAL 251 + G + L L T HP L++ ++ L Sbjct: 411 AARAVLGRTVAVQ-KERGVFLPL---DDGADLLITAHPSYLLRLGDKARAEEERRFTADL 466 Query: 252 ITLKKALK 259 L + + Sbjct: 467 AMLARRIA 474 >gi|170744654|ref|YP_001773309.1| uracil-DNA glycosylase superfamily protein [Methylobacterium sp. 4-46] gi|168198928|gb|ACA20875.1| Uracil-DNA glycosylase superfamily [Methylobacterium sp. 4-46] Length = 493 Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 79/233 (33%), Gaps = 18/233 (7%) Query: 41 RKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI 100 + + + I+ + +P AQ L L +L+R L + + Sbjct: 263 NARRRVAAMIEREPAMPRKRTPTRALDAMAAQGPEDLEALNALIRRSE--PLVPGATQAV 320 Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160 G + +G P D ++ G+PF G G +L + ++ + R +++ Sbjct: 321 LGEGPVGAAIAFVGEQPGDQEDRLGRPFVGPAGQLLTRAMEEAGLARGSCYLTNAVKHFK 380 Query: 161 PG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL 213 ++ + E+ R + R++ + P++++ +G A + Sbjct: 381 FEERGKRRIHQKPTAGEVAHGRWWLDRELGFVHPRLVVALGATAVLALTG-KAIPITRAR 439 Query: 214 GKWSNLCTPHSIIPTLATVHPQELIQYP-LIKKNTW----HALITLKKALKNL 261 G TVHP L++ P K + L ++ + L Sbjct: 440 G---PARFDGKPYAGFVTVHPSYLLRLPEEAKAEAYAGFVDDLRRVRMLAQEL 489 >gi|86157607|ref|YP_464392.1| phage SPO1 DNA polymerase-like protein [Anaeromyxobacter dehalogenans 2CP-C] gi|85774118|gb|ABC80955.1| phage SPO1 DNA polymerase-related protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 224 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 74/188 (39%), Gaps = 11/188 (5%) Query: 58 HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117 +P A + + +L L+ C L T+ +M++G P Sbjct: 2 PRRAPPGGTAAPLVPRRATLPALRRAAAGCTACPLWERGTQTVFGAGAPRATVMLVGEQP 61 Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRNLSNIE 170 + ++ +G+PF G G +LD+ L + + R +++ ++ S E Sbjct: 62 GNDEDRAGEPFVGPAGRLLDRALAAAGLDRRDAYVTNAVKHFKWEPRGKRRIHQKPSAGE 121 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230 + C P + ++ + P+ ++ +G + + G+ + +P + I +A Sbjct: 122 VRACLPWLEAELAAVRPRAVVCLGATAAQALLG-RGFRLTERRGQ--PVPSPLAEI-VVA 177 Query: 231 TVHPQELI 238 T+HP ++ Sbjct: 178 TLHPSAVL 185 >gi|163733270|ref|ZP_02140714.1| uracil-DNA glycosylase, putative [Roseobacter litoralis Och 149] gi|161393805|gb|EDQ18130.1| uracil-DNA glycosylase, putative [Roseobacter litoralis Och 149] Length = 477 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 72/209 (34%), Gaps = 11/209 (5%) Query: 38 ESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL 97 + + + P I + QQA + L + C L T+ Sbjct: 243 ATAPERARQMALAAPTLPPARIGAIQAQQASYESVWDGPPGSLPQAIAGCTRCPLHKTAT 302 Query: 98 STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP 157 + LMI+G P D +++ G+PF G G + D++ + + R Q+ I+ Sbjct: 303 QAVPGEGPIDARLMIVGEQPGDQEDLIGRPFVGPAGQLFDRIAADVGLDRGQVFITNAVK 362 Query: 158 W-------HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210 ++ + E+ C+ + ++ ++P L+ T + Sbjct: 363 HFKFVPRGRKRIHQRPNQGEVAHCKWWLDAELRQVAP-DLVVAMGATAAAALTGSGKAIS 421 Query: 211 QNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 G+ + I L T HP L++ Sbjct: 422 ARRGRI---EIGQAGISVLITWHPSYLLR 447 >gi|157413095|ref|YP_001483961.1| Uracil-DNA glycosylase [Prochlorococcus marinus str. MIT 9215] gi|157387670|gb|ABV50375.1| Uracil-DNA glycosylase [Prochlorococcus marinus str. MIT 9215] Length = 167 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 38/168 (22%), Positives = 70/168 (41%), Gaps = 11/168 (6%) Query: 97 LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI-MRTQIHISMI 155 + + DL+IIG P +++ GKP+ GK+G +L ++L I ++ + Sbjct: 2 KRLVIGRGSVFADLLIIGEAPGAQEDLEGKPYVGKSGKLLKELLIKAGIDYEADVYFCNV 61 Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK 215 PP NR + E++I +P +++QI+L+ PK +L G+ G+ Sbjct: 62 IKCRPPNNRKPTTGEIKIHKPWLLQQIKLVDPKFILLTGSTAMRAILEVK-DSISNLRGQ 120 Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLIK-----KNTWHALITLKKAL 258 W + HP L+++P + T L + L Sbjct: 121 W----IKKDGREIMVIFHPSYLLRFPSKEINKPYHLTLKDLENVSGKL 164 >gi|254255279|ref|ZP_04948595.1| Uracil-DNA glycosylase [Burkholderia dolosa AUO158] gi|124901016|gb|EAY71766.1| Uracil-DNA glycosylase [Burkholderia dolosa AUO158] Length = 220 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 74/194 (38%), Gaps = 11/194 (5%) Query: 57 RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYT 116 R + + +S + + L + C L + + + +M++G Sbjct: 6 RTVKPTSAAERESPRVPDVDPDQQPATLDACRRCPLWANATQGVPGVGPRHAPIMMVGEQ 65 Query: 117 PSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPGNRNLS----NI 169 P D +++ G PF G G +LD L I R ++++ W P G R L Sbjct: 66 PGDKEDLQGLPFVGPAGALLDDALAEAGIGRGDVYVTNAVKHFKWTPRGKRRLHKTPAQR 125 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E++ CR + ++++ + +++ +G + + +GK H + Sbjct: 126 EVDACRYWLDKELDGVGAHVVVALGATALKAVLEDPKSRLQDAIGKV----VRHGDRFVV 181 Query: 230 ATVHPQELIQYPLI 243 AT HP ++ P Sbjct: 182 ATYHPSFALRAPDA 195 >gi|123968265|ref|YP_001009123.1| Uracil-DNA glycosylase [Prochlorococcus marinus str. AS9601] gi|123198375|gb|ABM70016.1| Uracil-DNA glycosylase [Prochlorococcus marinus str. AS9601] Length = 167 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 37/168 (22%), Positives = 71/168 (42%), Gaps = 11/168 (6%) Query: 97 LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI-MRTQIHISMI 155 + + DL++IG P +++ GKP+ GK+G +L+++L I + ++ + Sbjct: 2 KRLVIGRGSVFADLLVIGEAPGAQEDLEGKPYVGKSGKLLNELLIQAGIDYKKDVYFCNV 61 Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK 215 PP NR + E+ I +P +++QI+L+ PK +L G+ G+ Sbjct: 62 IKCRPPNNRKPTAREINIHKPWLLQQIKLVDPKFILLTGSTAMRAILEVK-DPISNLRGQ 120 Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLIK-----KNTWHALITLKKAL 258 W + HP L+++P + T L + L Sbjct: 121 W----IKKDGREIMVIFHPSYLLRFPSKEINKPYHLTLKDLENVSGKL 164 >gi|53723251|ref|YP_112236.1| DNA glycosylase [Burkholderia pseudomallei K96243] gi|126442562|ref|YP_001064135.1| uracil-DNA glycosylase [Burkholderia pseudomallei 668] gi|237507691|ref|ZP_04520406.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei MSHR346] gi|52213665|emb|CAH39719.1| putative DNA glycosylase [Burkholderia pseudomallei K96243] gi|126222053|gb|ABN85558.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 668] gi|234999896|gb|EEP49320.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei MSHR346] Length = 218 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 80/206 (38%), Gaps = 20/206 (9%) Query: 53 ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMI 112 + R HSP ++A +L + C L + + +M+ Sbjct: 2 ARDARAAHSPRRRRAADDDDAPQTLD-------ACRRCGLWEHATQAVPGAGPPRAAIML 54 Query: 113 IGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRN 165 +G P + ++ G PF G G +L++ L + + R ++++ ++ Sbjct: 55 VGEQPGNQEDREGAPFVGPAGRVLERALAAAGLDRASVYVTNAVKHFKWAPRGKRRMHKT 114 Query: 166 LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI 225 + E++ CR + R+++ + P++++ +G ++ + +G + Sbjct: 115 PAQQEIDACRYWLERELDALGPRVVVALGAIALKAVLDDRHARLQSAMG----VVQSAGG 170 Query: 226 IPTLATVHPQELIQ--YPLIKKNTWH 249 +AT HP +++ P +K + Sbjct: 171 RYVIATYHPSFVLRVPDPDARKRAYA 196 >gi|254526412|ref|ZP_05138464.1| uracil-DNA glycosylase [Prochlorococcus marinus str. MIT 9202] gi|221537836|gb|EEE40289.1| uracil-DNA glycosylase [Prochlorococcus marinus str. MIT 9202] Length = 167 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 38/168 (22%), Positives = 70/168 (41%), Gaps = 11/168 (6%) Query: 97 LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI-MRTQIHISMI 155 + + DL+IIG P +++ GKP+ GK+G +L+++L I ++ + Sbjct: 2 KRLVIGRGSVFADLLIIGEAPGAQEDLEGKPYVGKSGKLLNELLIQAGIDYEKDVYFCNV 61 Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK 215 PP NR + E+ I +P +++QI+L+ PK +L G+ G+ Sbjct: 62 IKCRPPNNRKPTVREINIHKPWLLQQIKLVDPKFILLTGSTAMRAILEVK-DPISNLRGQ 120 Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLIK-----KNTWHALITLKKAL 258 W + HP L+++P + T L + L Sbjct: 121 W----IKKDGREIMVIFHPSYLLRFPSKEINKPYHLTLKDLENVSGKL 164 >gi|170749939|ref|YP_001756199.1| uracil-DNA glycosylase superfamily protein [Methylobacterium radiotolerans JCM 2831] gi|170656461|gb|ACB25516.1| Uracil-DNA glycosylase superfamily [Methylobacterium radiotolerans JCM 2831] Length = 493 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 80/226 (35%), Gaps = 16/226 (7%) Query: 48 SAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEG 107 + I+ + P A Q +L EL +++R L + + G Sbjct: 270 AMIEREPTMPTRREPARAVAAMADQDPKTLEELNAIIRRTE--PLVPGATQAVLGEGPVG 327 Query: 108 QDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG----- 162 + +G P D ++ G+PF G G +L + + I R +++ Sbjct: 328 ATVAFVGEQPGDQEDRQGRPFVGPAGQLLSRAMAEAGIDRGASYLTNAVKHFKFEERGKR 387 Query: 163 --NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220 ++ + E+ R + R++E + PK+++ +G A + G + Sbjct: 388 RIHQKPTAGEVSHYRWWLDRELEFVGPKLVVALGATAVLALTG-KAIPITRARGPFRFDR 446 Query: 221 TPHSIIPTLATVHPQELIQYP-LIKKNTW----HALITLKKALKNL 261 + TVHP L++ P K + L ++ + L Sbjct: 447 HDNR-FQGFITVHPSYLLRLPDEAKAEAYAAFVDDLRRVEALGREL 491 >gi|126696066|ref|YP_001090952.1| Uracil-DNA glycosylase [Prochlorococcus marinus str. MIT 9301] gi|126543109|gb|ABO17351.1| Uracil-DNA glycosylase [Prochlorococcus marinus str. MIT 9301] Length = 167 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 38/168 (22%), Positives = 71/168 (42%), Gaps = 11/168 (6%) Query: 97 LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI-MRTQIHISMI 155 + + DL+IIG P +++ GKP+ GK+G +L+++L I + ++ + Sbjct: 2 KRLVIGRGSVFADLLIIGEAPGAQEDLEGKPYVGKSGKLLNELLIQAGIDYKKDVYFCNV 61 Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK 215 PP NR + E+ I +P +++QI+L+ PK +L G+ G+ Sbjct: 62 IKCRPPNNRKPTAREINIHKPWLLQQIKLVDPKFILLTGSTAMRAILEVK-DPISNLRGQ 120 Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLIK-----KNTWHALITLKKAL 258 W + HP L+++P + T L + L Sbjct: 121 W----IKQDGREIMIIFHPSYLLRFPSKEINKPYHLTLKDLENVSDRL 164 >gi|167829772|ref|ZP_02461243.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 9] Length = 232 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 33/221 (14%), Positives = 81/221 (36%), Gaps = 20/221 (9%) Query: 38 ESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL 97 A + R HSP ++A +L + C L + Sbjct: 1 HRPAPPGVGVKARHMARDARAAHSPRRRRAADDDDAPQTLD-------ACRRCGLWEHAT 53 Query: 98 STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP 157 + +M++G P + ++ G PF G G +L++ L + + R ++++ Sbjct: 54 QAVPGAGPPRAAIMLVGEQPGNQEDREGAPFVGPAGRVLERALAAAGLDRASVYVTNAVK 113 Query: 158 WH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210 ++ + E++ CR + R+++ + P++++ +G ++ + Sbjct: 114 HFKWAPRGKRRMHKTPAQQEIDACRYWLERELDALEPRVVVALGAIALKAVLDDRHARLQ 173 Query: 211 QNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKKNTWH 249 +G + +AT HP +++ P +K + Sbjct: 174 PAMG----VVQSAGGRYVIATYHPSFVLRVPDPDARKRAYA 210 >gi|240170457|ref|ZP_04749116.1| uracil DNA glycosylase superfamily protein [Mycobacterium kansasii ATCC 12478] Length = 222 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 80/214 (37%), Gaps = 17/214 (7%) Query: 59 IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPS 118 +P A + + L L+ RS C L + + T+ T LM++G P Sbjct: 2 TTAPAAGAARYLPDE-RELTLLEDAARSCRGCALYADAARTVFGHGTCDAPLMLVGEQPG 60 Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPG----NRNLSNIEM 171 D ++ G PF G G +L + L I + + + G ++ S E+ Sbjct: 61 DREDQEGLPFVGPAGRLLQRALDDAGIDPGLTYQTNAVKHFKFRRQGKRRIHQKPSRTEV 120 Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP---- 227 CRP ++ +IE + P++++ +G + + T + T + Sbjct: 121 VACRPWLIAEIEAVRPQLIVCLGATAAQSLLGSAFRVTAHRGERLRLSATLRVAVNPEPL 180 Query: 228 TLATVHPQELIQYPLIKK-----NTWHALITLKK 256 ATVHP +++ ++ L + + Sbjct: 181 VTATVHPSAVLRDRSERRGEAYTLFVEDLKSARA 214 >gi|254182537|ref|ZP_04889131.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 1655] gi|184213072|gb|EDU10115.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 1655] Length = 218 Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 80/206 (38%), Gaps = 20/206 (9%) Query: 53 ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMI 112 + R HSP ++A +L + C L + + +M+ Sbjct: 2 ARDARAAHSPRRRRAADDDDAPQTLD-------ACRRCGLWEHATQAVPGAGPPRAAIML 54 Query: 113 IGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRN 165 +G P + ++ G PF G G +L++ L + + R ++++ ++ Sbjct: 55 VGEQPGNQEDREGAPFVGPAGRVLERALAAAGLDRASVYVTNAVKHFKWAPRGKRRMHKT 114 Query: 166 LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI 225 + E++ CR + R+++ + P++++ +G ++ + +G + Sbjct: 115 PAQQEIDACRYWLERELDALGPRVVVALGAIALKAVLDDRHARLQPAMG----VVQSAGG 170 Query: 226 IPTLATVHPQELIQ--YPLIKKNTWH 249 +AT HP +++ P +K + Sbjct: 171 RYVIATYHPSFVLRVPDPDARKRAYA 196 >gi|117927329|ref|YP_871880.1| phage SPO1 DNA polymerase-related protein [Acidothermus cellulolyticus 11B] gi|117647792|gb|ABK51894.1| phage SPO1 DNA polymerase-related protein [Acidothermus cellulolyticus 11B] Length = 217 Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 84/218 (38%), Gaps = 22/218 (10%) Query: 60 HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSD 119 + A + A L EL+ R C L + T+ ++ ++++G P D Sbjct: 2 TADYPGAARWVPTGAG-LDELRRAARGCQGCPLYRNATQTVFSSGPPTARIVLVGEQPGD 60 Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPG------NRNLSNIE 170 ++ G PF G GN+LD+ L+ + I R +++ + G ++ E Sbjct: 61 QEDRRGAPFVGPAGNILDRALEEVGIDRAAAYVTNAVKHFKFRQDGPGARRIHQTPDQRE 120 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT-- 228 + CRP + ++ ++ P I++ +G F D + + G P Sbjct: 121 ITACRPWLAAELAIVDPDIIVALGATAGRALFGPDFRVN-RTRGALLPWPAPPHEDAVRV 179 Query: 229 ----LATVHPQELIQYPLIKKNTWH----ALITLKKAL 258 LAT+HP +++ ++ + L + L Sbjct: 180 NKFFLATIHPSAVLRA-DDREAAYQGLVADLRLAAEVL 216 >gi|134281821|ref|ZP_01768528.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 305] gi|226194144|ref|ZP_03789744.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei Pakistan 9] gi|134246883|gb|EBA46970.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 305] gi|225933837|gb|EEH29824.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei Pakistan 9] Length = 218 Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 80/206 (38%), Gaps = 20/206 (9%) Query: 53 ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMI 112 + R HSP ++A +L + C L + + +M+ Sbjct: 2 ARDARAAHSPRRRRAADDDDAPQTLD-------ACRRCGLWEHATQAVPGAGPPRAAIML 54 Query: 113 IGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRN 165 +G P + ++ G PF G G +L++ L + + R ++++ ++ Sbjct: 55 VGEQPGNQEDREGAPFVGPAGRVLERALAAAGLDRASVYVTNAVKHFKWAPRGKRRMHKT 114 Query: 166 LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI 225 + E++ CR + R+++ + P++++ +G ++ + +G + Sbjct: 115 PAQQEIDACRYWLERELDALEPRVVVALGAIALKAVLDDRHARLQPAMG----VVQSAGG 170 Query: 226 IPTLATVHPQELIQ--YPLIKKNTWH 249 +AT HP +++ P +K + Sbjct: 171 RYVIATYHPSFVLRVPDPDARKRAYA 196 >gi|225024342|ref|ZP_03713534.1| hypothetical protein EIKCOROL_01217 [Eikenella corrodens ATCC 23834] gi|224942927|gb|EEG24136.1| hypothetical protein EIKCOROL_01217 [Eikenella corrodens ATCC 23834] Length = 326 Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 51/245 (20%), Positives = 86/245 (35%), Gaps = 24/245 (9%) Query: 27 VFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIA-----------QKAC 75 ++P T Q + +AI +P ++D +A Sbjct: 94 APNQPAARTTPPPQGHRADVLAAIATPQPFLPAPAPAESESDPLAVVQWLWAVLPHTAFA 153 Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 S EL+ + C L S + LM+I P+ SD+ +G+ S + G + Sbjct: 154 SPEELQRQAAACATCSLHSQRKQALSGYGAMPARLMVISLNPAPSDDETGRLISDRHGRL 213 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 LD ML +I + Q+ + P + E C I ++ + P+ +L +GN Sbjct: 214 LDNMLAAIGLAPEQVFRTAWLRCTPRIALKTTPEEQVRCAAFIRQEFAWVQPQAVLLLGN 273 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 H+ T+ HP L++ P +K WH+L LK Sbjct: 274 -----------SFYDPARRWLLEQLIGHTPAFTVP--HPAILLRQPELKAQAWHSLKQLK 320 Query: 256 KALKN 260 AL Sbjct: 321 AALAK 325 >gi|117927565|ref|YP_872116.1| phage SPO1 DNA polymerase-related protein [Acidothermus cellulolyticus 11B] gi|117648028|gb|ABK52130.1| phage SPO1 DNA polymerase-related protein [Acidothermus cellulolyticus 11B] Length = 225 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 73/170 (42%), Gaps = 7/170 (4%) Query: 72 QKACSLHELKSLLRSFHDC-HLCSTSLSTICA-TQTEGQDLMIIGYTPSDSDNISGKPFS 129 + +L + +R C L + + + ++++G P ++ +G PF Sbjct: 8 AADDAWDQLAAQIRRCRRCAELAANRRHVVVGVRPAVARPVVLVGEAPGAEEDRTGLPFV 67 Query: 130 GKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189 G+ G +LD++L + R + I + PPGNR + +E+ CRP + Q+ L+ P + Sbjct: 68 GRAGRLLDELLVDAGLPRATVAIVNVLKCRPPGNRVPNRVEIAACRPWLEAQLALLDPGV 127 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 ++ +G +FF Q G+ L + T HP ++ Sbjct: 128 VVALGGTAVAWFF-ERPVTLAQVRGRVHEL----RGWRVVPTYHPSAALR 172 >gi|56552081|ref|YP_162920.1| Uracil-DNA glycosylase superfamily protein [Zymomonas mobilis subsp. mobilis ZM4] gi|241762033|ref|ZP_04760117.1| Uracil-DNA glycosylase superfamily [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|56543655|gb|AAV89809.1| Uracil-DNA glycosylase superfamily [Zymomonas mobilis subsp. mobilis ZM4] gi|241373499|gb|EER63086.1| Uracil-DNA glycosylase superfamily [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 264 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 94/262 (35%), Gaps = 17/262 (6%) Query: 11 QILTIALFYADSGVYWV-FDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQ-QAD 68 ++ ++ +GV + D P N + S + I + L+ + + Sbjct: 2 AFKSLLEWWQQAGVDILTQDIPQNWFSKNHPENSLFKPSDNKNIRENNFSKNNLLNFKKN 61 Query: 69 SIAQKACSLHELKSLLRSFHDCHLCST---SLSTICATQTEGQDLMIIGYTPSDSDNISG 125 A SL +K++ ++ L + + LM++ +P D G Sbjct: 62 EEILSAPSL--IKNIPQNISSFQLWLQNIFGEKCLFSEVKISPKLMVLSESPEAEDMAQG 119 Query: 126 KPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIM------ 179 + FSGK G +L ML ++ I + I+ + +SP + + Sbjct: 120 QLFSGKAGRLLHAMLDTLSIKKQDIYFATMSPIVEHIDYVKISSYAAGNSLTFHDYTLIA 179 Query: 180 -RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238 + I LI P+ LL +G+ + K + + I A +HP+ L+ Sbjct: 180 AQHISLIKPRYLLLLGDAPNRALLQMNT---MDARKKIHAITVNNDNIDAFALLHPKMLL 236 Query: 239 QYPLIKKNTWHALITLKKALKN 260 + P +K W L LK + Sbjct: 237 ETPSLKAIAWKDLRVLKGKIDE 258 >gi|284992827|ref|YP_003411381.1| phage SPO1 DNA polymerase-like protein [Geodermatophilus obscurus DSM 43160] gi|284066072|gb|ADB77010.1| phage SPO1 DNA polymerase-related protein [Geodermatophilus obscurus DSM 43160] Length = 207 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 79/209 (37%), Gaps = 11/209 (5%) Query: 57 RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCH-LCSTSLSTICATQTE--GQDLMII 113 ++ A A L ++ R C L +T + ++ Sbjct: 4 PPRFDAAAEEVARTAAAAPDWEALAAVARPCVACPELAATRQHVVVGDVPAGGRPRFALV 63 Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173 G P S++ +G+ F GK+G +LD++L + R + + + PPGNR E+ Sbjct: 64 GEAPGASEDETGRAFVGKSGQLLDRLLVEAGLDRAEAAVLNVVKCRPPGNRTPKASEVAR 123 Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 C + RQ++L+ P +++ +G + +F + G+ ++ AT H Sbjct: 124 CSGWLRRQLDLLDPPVVVALGLSSAKWFLGPRTVL-AEVRGRAHDV----DGRAVWATYH 178 Query: 234 PQELIQYPLI---KKNTWHALITLKKALK 259 P I++ + L + L Sbjct: 179 PSAAIRFGPKGTPRAGLLADLTAVAGTLA 207 >gi|167851239|ref|ZP_02476747.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei B7210] Length = 177 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 71/175 (40%), Gaps = 13/175 (7%) Query: 84 LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143 L + C L + + +M++G P + ++ G PF G G +L++ L + Sbjct: 3 LDACRRCGLWEHATQAVPGAGPPRAAIMLVGEQPGNQEDREGAPFVGPAGRVLERALAAA 62 Query: 144 EIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 + R ++++ ++ + E++ CR + R+++ + P++++ +G Sbjct: 63 GLDRASVYVTNAVKHFKWAPRGKRRMHKTPAQQEIDACRYWLERELDALGPRVVVALGAI 122 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKKNTWH 249 ++ + +G + +AT HP +++ P +K + Sbjct: 123 ALKAVLDDRHARLQSAMG----VVQSAGGRYVIATYHPSFVLRVPDPDARKRAYA 173 >gi|315502584|ref|YP_004081471.1| uracil-DNA glycosylase superfamily [Micromonospora sp. L5] gi|315409203|gb|ADU07320.1| Uracil-DNA glycosylase superfamily [Micromonospora sp. L5] Length = 233 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 77/234 (32%), Gaps = 33/234 (14%) Query: 58 HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117 + I A ++ EL++ C L + T+ E ++ +G P Sbjct: 2 AETESAPGAQEFIPPSADTIDELRAAAGDCRGCELYRDATQTVFGRGDEHARVVFVGEQP 61 Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW-------HPPGNRNLSNIE 170 D ++ G PF G G +L K + + QI+++ ++ + Sbjct: 62 GDIEDQKGLPFVGPAGRLLRKAVDDAALDPAQIYLTNAVKHFRFELRGRRRIHQTPDRVH 121 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT------PHS 224 + CRP ++ + + P+I++ +G + + G+ Sbjct: 122 VTACRPWLVAEFARLRPEIVVVLGATAAKALLGPSFRV-TKQRGELLPWPAAAQHPEDFE 180 Query: 225 IIPT--------------LATVHPQELIQYPLIKKNTWH----ALITLKKALKN 260 +P LAT+HP +++ + L KALK Sbjct: 181 RVPVDRTGTVADAPAARLLATIHPSAVLRADNQD-VAYEGLVADLKVAAKALKK 233 >gi|302866024|ref|YP_003834661.1| Uracil-DNA glycosylase superfamily [Micromonospora aurantiaca ATCC 27029] gi|302568883|gb|ADL45085.1| Uracil-DNA glycosylase superfamily [Micromonospora aurantiaca ATCC 27029] Length = 233 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 77/234 (32%), Gaps = 33/234 (14%) Query: 58 HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117 + I A ++ EL++ C L + T+ E ++ +G P Sbjct: 2 AETESAPGAQEFIPPSADTIDELRAAAGDCRGCELYRDATQTVFGRGDEHARVVFVGEQP 61 Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW-------HPPGNRNLSNIE 170 D ++ G PF G G +L K + + QI+++ ++ + Sbjct: 62 GDIEDQKGLPFVGPAGRLLRKAVDDAALDPAQIYLTNAVKHFRFELRGRRRIHQTPDRVH 121 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT------PHS 224 + CRP ++ + + P+I++ +G + + G+ Sbjct: 122 VTACRPWLVAEFARLRPEIVVVLGATAAKALLGPSFRV-TKQRGELLPWPAAAQHPEDFE 180 Query: 225 IIPT--------------LATVHPQELIQYPLIKKNTWH----ALITLKKALKN 260 +P LAT+HP +++ + L KALK Sbjct: 181 RVPVDRAGAVADAPAARLLATIHPSAVLRADNQD-VAYEGLVADLKVAAKALKK 233 >gi|260752389|ref|YP_003225282.1| uracil-DNA glycosylase superfamily [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258551752|gb|ACV74698.1| Uracil-DNA glycosylase superfamily [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 264 Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 93/262 (35%), Gaps = 17/262 (6%) Query: 11 QILTIALFYADSGVYWV-FDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQ-QAD 68 ++ ++ +GV + D P N + S + I + L+ + + Sbjct: 2 AFKSLLEWWQQAGVDILTQDIPQNWFSKNHPENSLFKPSDNKNIRENNFSKNNLLNFKKN 61 Query: 69 SIAQKACSLHELKSLLRSFHDCHLCST---SLSTICATQTEGQDLMIIGYTPSDSDNISG 125 A SL +K++ ++ L + + LM++ +P D G Sbjct: 62 EEILSAPSL--IKNIPQNISSFQLWLQNIFGEKCLFSEVKISPKLMVLSESPEAEDMAQG 119 Query: 126 KPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIM------ 179 + FSGK G +L ML ++ I + I+ + +SP + Sbjct: 120 QLFSGKAGRLLHAMLDTLSIKKQDIYFATMSPIVEHIDYVKIWSYAAGNSLTFHDYTLIA 179 Query: 180 -RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238 + I LI P+ LL +G+ + K + + I A +HP+ L+ Sbjct: 180 AQHISLIKPRYLLLLGDAPNRALLQMNT---MDARKKIHAITVNNDNIDAFALLHPKMLL 236 Query: 239 QYPLIKKNTWHALITLKKALKN 260 + P +K W L LK + Sbjct: 237 ETPSLKAIAWKDLRVLKGKIDE 258 >gi|284028884|ref|YP_003378815.1| Uracil-DNA glycosylase superfamily [Kribbella flavida DSM 17836] gi|283808177|gb|ADB30016.1| Uracil-DNA glycosylase superfamily [Kribbella flavida DSM 17836] Length = 205 Score = 122 bits (305), Expect = 6e-26, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 73/192 (38%), Gaps = 14/192 (7%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L +++ L S C L + + +M++G P D ++ G+ F G G +L Sbjct: 17 LRAVRAALPSCRGCDLWENAEQVVPGDGPARARMMLVGEQPGDVEDKEGQVFVGPAGRLL 76 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKI 189 DK L I R ++++ ++ + + C P + ++ ++ P++ Sbjct: 77 DKALAEAGIERDTVYVTNAVKHFRFEQRGKRRIHKTPAVGHIVACAPWLRSELAVVKPEL 136 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249 ++ +G+ + Q+ G+ L ATVHP +++ +++ Sbjct: 137 VVVLGSVAARSLLGTTFKV-TQHRGEPIALP---DGTAATATVHPSSVVRSREYRRDFEL 192 Query: 250 ---ALITLKKAL 258 L L Sbjct: 193 FVTDLRAAAAML 204 >gi|194477280|ref|YP_002049459.1| hypothetical protein PCC_0839 [Paulinella chromatophora] gi|171192287|gb|ACB43249.1| hypothetical protein PCC_0839 [Paulinella chromatophora] Length = 219 Score = 122 bits (305), Expect = 6e-26, Method: Composition-based stats. Identities = 46/195 (23%), Positives = 74/195 (37%), Gaps = 11/195 (5%) Query: 73 KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 K +L + H + +T L+ + + +LMII T D + PF+GK Sbjct: 26 KIQKFQKLSTAYSQCHKYSISNTGLNVVISRGNPYANLMIIEETTKDENYDGIGPFAGKA 85 Query: 133 GNMLDKMLQSIEIM-RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191 G +LD+ML SI I + + N L++ E+ R + Q ++I P+I+L Sbjct: 86 GQLLDRMLSSIGIHANKDAFMCNATKSRSQNNIKLTSREIVNYRQWLEHQTDIIKPRIIL 145 Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK-----N 246 G N + G W + +HP L++ K Sbjct: 146 LAGATAVEGVLNIKGGIQ-RIRGYWYLWE----GYWLMPILHPSYLLRNSSTTKNSPNWL 200 Query: 247 TWHALITLKKALKNL 261 W L +K LK L Sbjct: 201 MWRDLQNVKCRLKQL 215 >gi|330466417|ref|YP_004404160.1| uracil-DNA glycosylase superfamily protein [Verrucosispora maris AB-18-032] gi|328809388|gb|AEB43560.1| uracil-DNA glycosylase superfamily protein [Verrucosispora maris AB-18-032] Length = 230 Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats. Identities = 34/226 (15%), Positives = 77/226 (34%), Gaps = 31/226 (13%) Query: 63 LVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDN 122 I +A +L EL++ C L + T+ ++ +G P D ++ Sbjct: 5 APGAQQFIPPQADTLDELRAAAAGCQGCELYRDASQTVFGRGDATARVVFVGEQPGDMED 64 Query: 123 ISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICR 175 G PF G G +L + + ++ I+++ ++ + + CR Sbjct: 65 QKGLPFVGPAGRLLRRAVDDAKLDPGHIYLTNAVKHFRFELRGKRRIHQTPDRVHITACR 124 Query: 176 PIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS------NLCTPHSIIPT- 228 P ++ + ++P++++ +G + + G+ +P Sbjct: 125 PWLVAEFTQLNPQVIVVLGATAAKALLGPSFRV-TRQRGELLPWPAAAEHPEDFQRVPVD 183 Query: 229 -------------LATVHPQELIQYPLIKKNTW---HALITLKKAL 258 LAT+HP +++ K L ++AL Sbjct: 184 SAGDTTDAPPTQLLATIHPSAVLRADDQDKAYEGLVADLTVAERAL 229 >gi|221211852|ref|ZP_03584830.1| uracil-DNA glycosylase, family 4 [Burkholderia multivorans CGD1] gi|221167937|gb|EEE00406.1| uracil-DNA glycosylase, family 4 [Burkholderia multivorans CGD1] Length = 258 Score = 121 bits (304), Expect = 8e-26, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 78/198 (39%), Gaps = 12/198 (6%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELK-SLLRSFHDCHLCSTSLSTICATQTEGQD 109 + + +A S + + + + + L + C L + + T Sbjct: 27 ARAPRAGMRSACAMTRASSASGADDTPDDQRPATLDACRRCGLWEHATQPVPGTGPRHAS 86 Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPGNRNL 166 ++++G P D ++ +G PF G G++LD+ L + I R ++++ W P G R L Sbjct: 87 IVLVGEQPGDQEDRTGVPFVGAAGHVLDRALDAAGIDRRSVYLTNAVKHFKWEPRGKRRL 146 Query: 167 S----NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP 222 E+ CR + R++E + P++++ +G ++ + Sbjct: 147 HKTPAQREITACRYWLDRELESVHPRVIVALGGTALRAVLQDNDATLQRTPMPTRTAQ-- 204 Query: 223 HSIIPTLATVHPQELIQY 240 +AT HP +++ Sbjct: 205 --GYLVVATYHPSYVLRT 220 >gi|33861232|ref|NP_892793.1| Uracil-DNA glycosylase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33639964|emb|CAE19134.1| Uracil-DNA glycosylase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 167 Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 72/171 (42%), Gaps = 11/171 (6%) Query: 97 LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMI 155 + + +L+IIG P +++ G+P+ G++G +LD++L I + + + Sbjct: 2 KRLVISRGNVFANLLIIGEAPGALEDLEGEPYVGRSGKLLDELLIEAGIDLQKDVYFCNV 61 Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK 215 PP NR +N E+ I +P +M+QI+L+ PK ++ G+ + GK Sbjct: 62 IKCRPPNNRKPTNKEINIHKPWLMQQIKLVDPKFIILTGSTAMRTILEIK-NPISKTRGK 120 Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLI---KK--NTWHALITLKKALKNL 261 W + HP L+++ K T L + L L Sbjct: 121 WF----KKGGREIITIFHPSYLLRFSSKDVEKPYDLTLKDLKKVSSKLYAL 167 >gi|188581515|ref|YP_001924960.1| Uracil-DNA glycosylase superfamily [Methylobacterium populi BJ001] gi|179345013|gb|ACB80425.1| Uracil-DNA glycosylase superfamily [Methylobacterium populi BJ001] Length = 485 Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats. Identities = 33/229 (14%), Positives = 74/229 (32%), Gaps = 20/229 (8%) Query: 41 RKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI 100 + I+ + P+ A + +L L +++ L + + Sbjct: 261 AASARAQAMIEKEPTMPAKRDPVRAVAKMSQDEPETLDALNAIIARSE--PLVPGATQAV 318 Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160 G + +G P D ++ G+PF G G +L + L+ I R + +++ Sbjct: 319 LGEGPVGARIAFVGEQPGDQEDRQGRPFVGPAGQLLSRALEEAGIDRREAYLTNAVKHFK 378 Query: 161 PG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL 213 + + E+ R + R++ ++PK+++ +G + Sbjct: 379 FTLRGKRRIHEKPTAGEVSHYRWWLDRELGFVAPKLVVALGATAVLALTG-KQIPITRAR 437 Query: 214 GKWSNLCTPHSIIPTLATVHPQELIQYPLI------KKNTWHALITLKK 256 G TVHP L++ P + L ++ Sbjct: 438 GP----ADFGRPFEGFITVHPSYLLRLPDEAAKAAAYQAFVEDLRRVQA 482 >gi|73538225|ref|YP_298592.1| Phage SPO1 DNA polymerase-related protein [Ralstonia eutropha JMP134] gi|72121562|gb|AAZ63748.1| Phage SPO1 DNA polymerase-related protein [Ralstonia eutropha JMP134] Length = 207 Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 62/171 (36%), Gaps = 11/171 (6%) Query: 81 KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML 140 + + + C L + + LM++G P + +++ G+PF G G +L + L Sbjct: 15 REEVNACRRCPLWHDATQGVPGAGPTSAKLMLVGEQPGNEEDLQGEPFVGPAGRLLSEAL 74 Query: 141 QSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFI 193 + + R ++++ ++ +E+E C + ++I + P +++ + Sbjct: 75 ERAGLERHDVYLTNAVKHFKFQLRGKRRLHKTPGQLEVEACGIWLEQEIRAVEPTVIVAL 134 Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK 244 G + +AT HP +++ + Sbjct: 135 GATATGAVLGKKRVALS----TLMDAPVEREGRIVVATYHPSFVLRQRSEE 181 >gi|319787262|ref|YP_004146737.1| phage SPO1 DNA polymerase-related protein [Pseudoxanthomonas suwonensis 11-1] gi|317465774|gb|ADV27506.1| phage SPO1 DNA polymerase-related protein [Pseudoxanthomonas suwonensis 11-1] Length = 219 Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 83/218 (38%), Gaps = 17/218 (7%) Query: 56 IRHIHSPLVQQADSIAQKAC-----SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 R V+QA +A+ SL L+ C L + T+ + Sbjct: 2 PRKDDPERVEQAPRLARPVDEVPQGSLSALRREAAGCRRCPLWRPATQTVFGAGPARAQV 61 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------N 163 +++G P D +++ GKPF G G +L K L + ++++ + Sbjct: 62 LLVGEQPGDREDLEGKPFVGPAGQLLRKALVEAGLAPQSLYLTNTVKHFKFQPRGKRRLH 121 Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH 223 + + E CRP + +++ I+P I++ +G F + G+W L Sbjct: 122 QRANAAEQAACRPWLAAELDRINPDIVVALGAMAAQTLFGP-GFRLTHQRGQWQRL---G 177 Query: 224 SIIPTLATVHPQELIQYPLIKKN-TWHALITLKKALKN 260 LAT HP +++ ++ + L+ + L + Sbjct: 178 PHTQALATWHPSAILRMRSPEREAAYAQLLADLRRLHD 215 >gi|226363278|ref|YP_002781060.1| uracil-DNA glycosylase [Rhodococcus opacus B4] gi|226241767|dbj|BAH52115.1| putative uracil-DNA glycosylase [Rhodococcus opacus B4] Length = 223 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 35/196 (17%), Positives = 72/196 (36%), Gaps = 13/196 (6%) Query: 60 HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSD 119 A L +L C L + T+ + +M++G P D Sbjct: 2 SRATKPSAAPFVPDTVDLDKLSHAAEGCRGCDLYRDAGQTVFGAGSRSARMMLVGEQPGD 61 Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH---------PPGNRNLSNIE 170 ++ +G+PF G G +L+K L + +I R +++ ++ + E Sbjct: 62 QEDRAGEPFVGPAGKLLNKALDAADIDRDLTYVTNAVKHFKFIPAERGKRRIHKKPNRTE 121 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP---HSIIP 227 + CRP ++ ++ + P +L+ +G + T G+ +L Sbjct: 122 IVACRPWLIAELAAVQPDVLVCLGATAAQALLGPSFRLTEH-HGELLHLDGEVDVDVDPD 180 Query: 228 TLATVHPQELIQYPLI 243 AT+HP +++ P Sbjct: 181 VFATIHPSAVLRGPSA 196 >gi|298707566|emb|CBJ30150.1| conserved unknown protein [Ectocarpus siliculosus] Length = 342 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 76/187 (40%), Gaps = 16/187 (8%) Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI-MRTQ 149 L + LM+IG P ++ G PF G++G +LD ML+++ + Sbjct: 153 PLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFVGRSGQLLDDMLRAVGFDPERE 212 Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209 +++S I P NR + EM+ P ++ +I L+ P +++ +G + + + Sbjct: 213 VYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPHVIVLLGASSTKALLPYETRGI 272 Query: 210 YQNLGKWSN-------LCTPHSIIPTLATVHPQELIQYPLIKKN--------TWHALITL 254 + G+W++ + + + HP L++ + + L + Sbjct: 273 TRARGQWADPVALAEIHGGRLADMLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLREV 332 Query: 255 KKALKNL 261 + ++ + Sbjct: 333 RDVVRGI 339 >gi|161522495|ref|YP_001585424.1| phage SPO1 DNA polymerase-related protein [Burkholderia multivorans ATCC 17616] gi|189348630|ref|YP_001941826.1| bacteriophage-type DNA polymerase [Burkholderia multivorans ATCC 17616] gi|160346048|gb|ABX19132.1| phage SPO1 DNA polymerase-related protein [Burkholderia multivorans ATCC 17616] gi|189338768|dbj|BAG47836.1| bacteriophage-type DNA polymerase [Burkholderia multivorans ATCC 17616] Length = 219 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 76/184 (41%), Gaps = 12/184 (6%) Query: 65 QQADSIAQKACSLHELK-SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123 +A S + + + + + L + C L + + T ++++G P D ++ Sbjct: 2 TRASSASGADDTPDDQRPATLDACRRCGLWEHATQPVPGTGPRHASIVLVGEQPGDQEDR 61 Query: 124 SGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPGNRNLS----NIEMEICRP 176 +G PF G G++LD+ L + I R ++++ W P G R L E+ CR Sbjct: 62 TGVPFVGAAGHVLDRALDAAGIDRRSVYLTNAVKHFKWEPRGKRRLHKTPAQREITACRY 121 Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236 + R++E + P++++ +G ++ + +AT HP Sbjct: 122 WLDRELESVHPRVIVALGGTALRAVLQDNDATLQRTPTPTRTAQ----GYLVVATYHPSY 177 Query: 237 LIQY 240 +++ Sbjct: 178 VLRT 181 >gi|307725694|ref|YP_003908907.1| Uracil-DNA glycosylase superfamily [Burkholderia sp. CCGE1003] gi|307586219|gb|ADN59616.1| Uracil-DNA glycosylase superfamily [Burkholderia sp. CCGE1003] Length = 221 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 79/221 (35%), Gaps = 20/221 (9%) Query: 53 ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMI 112 T R S + ++ A + + L + C L + + + +M+ Sbjct: 2 ATTRRTAKSTPAAEGETAASPEVHPDQQPATLDACRRCALWVNATQGVPGAGPKRAPIMM 61 Query: 113 IGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRN 165 +G P D ++++G PF G G +LD L + R +++++ ++ Sbjct: 62 VGEQPGDKEDLAGLPFVGPAGALLDDALAEAGVARKEVYVTNAVKHFKWTPRGKRRMHKT 121 Query: 166 LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI 225 + E++ CR + R++E + +++ +G + + ++G H Sbjct: 122 PAQREVDACRYWLERELENVGAHVIVALGATALKAVLEDPKSRLQDSIGTVIE----HGD 177 Query: 226 IPTLATVHPQELIQYPL----IKKN-----TWHALITLKKA 257 +AT HP ++ P + L + Sbjct: 178 RLVVATYHPSFALRAPDPETRQRAYAAIVAALQDAKKLAQR 218 >gi|302528267|ref|ZP_07280609.1| DNA polymerase [Streptomyces sp. AA4] gi|302437162|gb|EFL08978.1| DNA polymerase [Streptomyces sp. AA4] Length = 205 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 79/189 (41%), Gaps = 10/189 (5%) Query: 63 LVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDN 122 Q+ + SL +L+ R C L + +T+ + D+ +G P D ++ Sbjct: 3 ARQEPGAEPPDTTSLGKLREAARECRGCGLYRDATATVFGEGPQRADIFALGEQPGDQED 62 Query: 123 ISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICR 175 G+PF G G +LDK L + R ++++ + + E+ CR Sbjct: 63 QRGEPFVGPAGRLLDKALADAGLDRDSLYVTNAVKHFKFKLRGKRRIHEKPARSEVVACR 122 Query: 176 PIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP--TLATVH 233 P ++ ++ + P+++L +G + + ++ G+ + + + +ATVH Sbjct: 123 PWLVAELRAVQPRLVLLLGATAAQSVYGTSFRL-TRHRGERLDPPEEFADLFASAVATVH 181 Query: 234 PQELIQYPL 242 P +++ P Sbjct: 182 PSAVLRAPD 190 >gi|257386782|ref|YP_003176555.1| phage SPO1 DNA polymerase-related protein [Halomicrobium mukohataei DSM 12286] gi|257169089|gb|ACV46848.1| phage SPO1 DNA polymerase-related protein [Halomicrobium mukohataei DSM 12286] Length = 195 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 39/169 (23%), Positives = 71/169 (42%), Gaps = 3/169 (1%) Query: 83 LLRSFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 + C L + + T DL+ +G P ++ G+PF G++G++LD L+ Sbjct: 8 QVTDCERCGDLVDSRSRIVDGTGPPEADLLFVGEAPGAQEDADGEPFVGRSGDVLDDALR 67 Query: 142 SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 + R + I+ PP NR+ E+ CRP + R+IEL+ P++++ +G Sbjct: 68 EAGLDRGDVRITNCVRCRPPDNRDPRQAELANCRPYLEREIELVDPELIVTLGKVPAEHL 127 Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 D T + G + L +VHP + +T+ Sbjct: 128 LERDVAVTSEA-GDVFDPEIGGQRRELLVSVHPAATLYDRSQ-ADTFDD 174 >gi|167821429|ref|ZP_02453109.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 91] Length = 206 Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 71/175 (40%), Gaps = 13/175 (7%) Query: 84 LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143 L + C L + + +M++G P + ++ G PF G G +L++ L + Sbjct: 14 LDACRRCGLWEHATQAVPGAGPPRAAIMLVGEQPGNQEDREGAPFVGPAGRVLERALAAA 73 Query: 144 EIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 + R ++++ ++ + E++ CR + R+++ + P++++ +G Sbjct: 74 GLDRASVYVTNAVKHFKWAPRGKRRMHKTPAQQEIDACRYWLERELDALGPRVVVALGAI 133 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKKNTWH 249 ++ + +G + +AT HP +++ P +K + Sbjct: 134 ALKAVLDDRHARLQSAMG----VVQSAGGRYVIATYHPSFVLRVPDPDARKRAYA 184 >gi|123965983|ref|YP_001011064.1| Uracil-DNA glycosylase [Prochlorococcus marinus str. MIT 9515] gi|123200349|gb|ABM71957.1| Uracil-DNA glycosylase [Prochlorococcus marinus str. MIT 9515] Length = 167 Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 37/171 (21%), Positives = 75/171 (43%), Gaps = 11/171 (6%) Query: 97 LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMI 155 + + +L+IIG P +++ GKP+ GK+G +L+++L I + + Sbjct: 2 KRLVISRGNVFANLLIIGEAPGAQEDLEGKPYVGKSGKLLNELLIEAGIDFQNDAYFCNV 61 Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK 215 PP NR +N E+ I +P +++QI+++ PK ++ G+ + + GK Sbjct: 62 IKCRPPNNRKPTNTEINIHKPWLLQQIKIVDPKFIILTGSTAMRTILEIK-EPISKLRGK 120 Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLIK-----KNTWHALITLKKALKNL 261 W + ++ HP L+++ + T L + + L L Sbjct: 121 W----IKNDGREIISIFHPSYLLRFSSKEVGKPYDLTLKDLKNVSRKLYAL 167 >gi|153011615|ref|YP_001372829.1| phage SPO1 DNA polymerase-related protein [Ochrobactrum anthropi ATCC 49188] gi|151563503|gb|ABS17000.1| phage SPO1 DNA polymerase-related protein [Ochrobactrum anthropi ATCC 49188] Length = 207 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 71/181 (39%), Gaps = 12/181 (6%) Query: 66 QADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISG 125 +I ++ +L ++ + R+ C L + T+ G + + P D ++I G Sbjct: 2 TVPAITRRQQNLEQVCAEARTCRRCELYQNATQTVFGEGRTGARVFFVAEQPGDKEDIGG 61 Query: 126 KPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPII 178 +P G G + D L + I R + +I+ ++ S +E CR + Sbjct: 62 RPLIGPAGRLFDACLNEVGIKRERCYITNAVKHFRHTQRGKRRIHQRPSTSHIEACRWWL 121 Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238 ++IEL+ P I++ +G F K G + L T+HP L+ Sbjct: 122 QQEIELVEPHIIVALGAVAARSLFG-KPMKIAAIRG----IPLEFENHLILVTIHPSYLL 176 Query: 239 Q 239 + Sbjct: 177 R 177 >gi|167744230|ref|ZP_02417004.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 14] Length = 201 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 71/181 (39%), Gaps = 13/181 (7%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 + L + C L + + +M++G P + ++ G PF G G +L+ Sbjct: 3 DDAPQTLDACRRCGLWEHATQAVPGAGPPRAAIMLVGEQPGNQEDREGAPFVGPAGRVLE 62 Query: 138 KMLQSIEIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 + L + + R ++++ ++ E++ CR + R+++ + P+++ Sbjct: 63 RALAAAGLDRASVYVTNAVKHFKWAPRGKRRMHKTPVQQEIDACRYWLERELDALEPRVV 122 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKKNTW 248 + +G ++ + +G + +AT HP +++ P +K + Sbjct: 123 VALGAIALKAVLDDRHARLQPAMG----VVQSAGGRYVIATYHPSFVLRVPDPDARKRAY 178 Query: 249 H 249 Sbjct: 179 A 179 >gi|257052840|ref|YP_003130673.1| phage SPO1 DNA polymerase-related protein [Halorhabdus utahensis DSM 12940] gi|256691603|gb|ACV11940.1| phage SPO1 DNA polymerase-related protein [Halorhabdus utahensis DSM 12940] Length = 194 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 71/174 (40%), Gaps = 2/174 (1%) Query: 84 LRSFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142 + C L ++ + +L+ +G P + ++ G+PF G++G +LD L+ Sbjct: 9 VEGCEQCGDLVASRSRIVDGVGPADAELLFVGEAPGEREDEQGEPFVGRSGTVLDDALRD 68 Query: 143 IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202 + R + I+ PP NR+ ++ E CRP + R+I+ + P +++ +G Sbjct: 69 AGLSRADVRITNCVRCRPPENRDPTSDERSNCRPYLDREIDQVDPTVIVTLGKVPGEHLL 128 Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 D T + G ++ + L VHP + ++ + Sbjct: 129 GRDLAVTSEA-GSIEDVDIEGTTRRVLICVHPAATLYDRSQRETFERTIQQAAD 181 >gi|238063450|ref|ZP_04608159.1| phage SPO1 DNA polymerase [Micromonospora sp. ATCC 39149] gi|237885261|gb|EEP74089.1| phage SPO1 DNA polymerase [Micromonospora sp. ATCC 39149] Length = 234 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 30/215 (13%), Positives = 74/215 (34%), Gaps = 28/215 (13%) Query: 56 IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115 + I +A ++ EL++ C L + T+ ++++G Sbjct: 1 MTDKTDTAPGAQQFIPPRADTIDELRAAAGGCRGCELYRDATQTVFGRGDSDARVVLVGE 60 Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW-------HPPGNRNLSN 168 P D ++ G PF G G +L + + + T+++++ ++ Sbjct: 61 QPGDMEDQRGLPFVGPAGRLLRRAVDDAGLDPTRLYLTNAVKHFRFELRGRRRIHQTPDR 120 Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT------P 222 + + CRP ++ + +SP++++ +G + + G Sbjct: 121 VHVTACRPWLVAEFARLSPEVVVVLGATAAKALLGPSFRV-TRQRGTLMPWPASAERPED 179 Query: 223 HSIIPT--------------LATVHPQELIQYPLI 243 + +P LAT+HP +++ Sbjct: 180 FTRVPVDSAGGIADAPAARLLATIHPSAVLRADDQ 214 >gi|167924391|ref|ZP_02511482.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei BCC215] Length = 218 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 71/175 (40%), Gaps = 13/175 (7%) Query: 84 LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143 L + C L + + +M++G P + ++ G PF G G +L++ L + Sbjct: 26 LDACRRCGLWEHATQAVPGAGPPRAAIMLVGEQPGNQEDREGAPFVGPAGRVLERALAAA 85 Query: 144 EIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 + R ++++ ++ + E++ CR + R+++ + P++++ +G Sbjct: 86 GLDRASVYVTNAVKHFKWAPRGKRRMHKTPAQQEIDACRYWLERELDALGPRVVVALGAI 145 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKKNTWH 249 ++ + +G + +AT HP +++ P +K + Sbjct: 146 ALKAVLDDRHARLQSAMG----VVQSAGGRYVIATYHPSFVLRVPDPDARKRAYA 196 >gi|186476068|ref|YP_001857538.1| phage SPO1 DNA polymerase-like protein [Burkholderia phymatum STM815] gi|184192527|gb|ACC70492.1| phage SPO1 DNA polymerase-related protein [Burkholderia phymatum STM815] Length = 490 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 78/202 (38%), Gaps = 12/202 (5%) Query: 46 IDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQT 105 S Q + + + A A + + S L + C L + + Sbjct: 259 AKSGAQRVAQASSVGMLGGKSVSVDAHSAQPMRQHLSTLDACRHCELWQHATQAVDGIGP 318 Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPG 162 + +M+IG P D ++++GKPF G G +LD LQ + R ++++ W G Sbjct: 319 DDARIMLIGEQPGDHEDLAGKPFVGPAGRLLDVALQRAGLSRDGLYLTNAVKHFKWTLRG 378 Query: 163 NRNLS----NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218 R L E++ C + R+++ + P +++ +G + + + W+ Sbjct: 379 KRRLHKTAAQQEIDACGYWLERELQRVRPAVVVTLGATALSALLHEKVNLSD-----WTG 433 Query: 219 LCTPHSIIPTLATVHPQELIQY 240 + +AT HP ++ Sbjct: 434 RTLNVDDMRVVATYHPSYALRQ 455 >gi|320107090|ref|YP_004182680.1| phage SPO1 DNA polymerase-like protein [Terriglobus saanensis SP1PR4] gi|319925611|gb|ADV82686.1| phage SPO1 DNA polymerase-related protein [Terriglobus saanensis SP1PR4] Length = 215 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 40/206 (19%), Positives = 79/206 (38%), Gaps = 16/206 (7%) Query: 64 VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123 + A +L ++ L C L + + +M++G P D +++ Sbjct: 8 ISTAAPFVPAKHNLTAIREALPHCRGCELYRCATQVVPGAGRATVSIMLVGEQPGDQEDL 67 Query: 124 SGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRP 176 GKPF G +L + L I + QI+++ ++N E+ CRP Sbjct: 68 QGKPFVDPAGEVLHRALAEISLDPAQIYVTNAVKHFKFVRNGKRRLHKNPRMSEITACRP 127 Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236 ++ + + I PKI+L +G ++ GK + +ATVHP Sbjct: 128 WLLAEFDAIKPKIVLCLGASAAKSILGGTFGLM-RDRGKILSTPFAEH---VMATVHPSA 183 Query: 237 LIQYPLIKKNTWHALIT--LKKALKN 260 +++ + + L+ L+ L+ Sbjct: 184 VLR---ARDHATRDLLFRHLRDDLEA 206 >gi|4511984|gb|AAD21544.1| DNA polymerse [Zymomonas mobilis subsp. mobilis ZM4] Length = 264 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 94/262 (35%), Gaps = 17/262 (6%) Query: 11 QILTIALFYADSGVYWV-FDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQ-QAD 68 ++ ++ +GV + D P N + S + I + L+ + + Sbjct: 2 AFKSLLEWWQQAGVDILTQDIPQNWFSKNHPENSLFKPSDNKNIRENNFSKNNLLNFKKN 61 Query: 69 SIAQKACSLHELKSLLRSFHDCHLCST---SLSTICATQTEGQDLMIIGYTPSDSDNISG 125 A SL +K++ ++ L + + LM++ +P D G Sbjct: 62 EEILSAPSL--IKNIPQNISSFQLWLQNIFGEKCLFSEVKISPKLMVLSESPEAEDMAQG 119 Query: 126 KPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEME-------ICRPII 178 + FSGK G +L ML ++ I + I+ + +SP + + I Sbjct: 120 QLFSGKAGRLLHAMLDTLCIKKQDIYFATMSPIVEHIDYVKISSYAAGNSLTSHDYTLIA 179 Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238 + I LI P+ L +G+ + K + + I A +HP+ L+ Sbjct: 180 AQHISLIKPRYLHLLGDAPNRALLQMNT---MDARKKIHAITVNNDNIDAFALLHPKMLL 236 Query: 239 QYPLIKKNTWHALITLKKALKN 260 + P +K W L LK + Sbjct: 237 ETPPLKAIAWKDLRVLKGKIDE 258 >gi|73669315|ref|YP_305330.1| DNA polymerase [Methanosarcina barkeri str. Fusaro] gi|72396477|gb|AAZ70750.1| DNA polymerase [Methanosarcina barkeri str. Fusaro] Length = 181 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 41/168 (24%), Positives = 71/168 (42%), Gaps = 8/168 (4%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 + + C L +++ + + + IG P +N +G PF G+ G LD Sbjct: 8 ETVTKEILKCTRCPLHKSAIKRVIGKGSCNPKVFFIGEAPGKRENETGIPFYGRAGKKLD 67 Query: 138 KMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197 KM++ + + ++ HPP NR S E+E C+P ++ QI L++PKI++ +GN Sbjct: 68 KMIEYMGLSEEDWMVTNTVKCHPPENRRPSINEIECCKPFLLSQIILLNPKIIILLGNTA 127 Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK 245 + F + + H L HP LI K+ Sbjct: 128 EKSFCPGKKLEW--------GVPVEHEGRTILKLYHPAALIYTSSKKE 167 >gi|218530534|ref|YP_002421350.1| uracil-DNA glycosylase superfamily [Methylobacterium chloromethanicum CM4] gi|218522837|gb|ACK83422.1| Uracil-DNA glycosylase superfamily [Methylobacterium chloromethanicum CM4] Length = 485 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 71/210 (33%), Gaps = 14/210 (6%) Query: 41 RKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI 100 + I+ + P+ A + SL L +++ L + + Sbjct: 261 AASARAQAMIEKEPTMPVKRDPVRAVAKMAQDEPDSLEALNAIIARSE--PLVPGATQAV 318 Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160 G + +G P D ++ G+PF G G +L + L+ I R + +++ Sbjct: 319 LGEGPVGARIAFVGEQPGDQEDRQGRPFVGPAGQLLSRALEEAGIDRGEAYLTNAVKHFK 378 Query: 161 PG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL 213 + + E+ R + ++++ ++PK+++ +G + Sbjct: 379 FTLRGKRRIHEKPTAGEVSHYRWWLEKELDFVAPKLVVALGATAVLSLTG-KQIPITRAR 437 Query: 214 GKWSNLCTPHSIIPTLATVHPQELIQYPLI 243 G TVHP L++ P Sbjct: 438 GP----AEFGRPFAGFITVHPSYLLRLPDE 463 >gi|76817668|ref|YP_336521.1| putative DNA glycosylase [Burkholderia pseudomallei 1710b] gi|254264522|ref|ZP_04955387.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 1710a] gi|76582141|gb|ABA51615.1| putative DNA glycosylase [Burkholderia pseudomallei 1710b] gi|254215524|gb|EET04909.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 1710a] Length = 218 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 72/175 (41%), Gaps = 13/175 (7%) Query: 84 LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143 L + C L + + +M++G P + ++ G PF G G +L++ L + Sbjct: 26 LDACRRCGLWEHATQAVPGAGPPRAAIMLVGEQPGNQEDREGAPFVGPAGRVLERALAAA 85 Query: 144 EIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 + R ++++ ++ + E++ CR + R+++ + P++++ +G Sbjct: 86 GLDRASVYVTNAVKHFKWAPRGKRRMHKTPAQQEIDACRYWLERELDALGPRVVVALGAI 145 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKKNTWH 249 ++ + +G + P +AT HP +++ P +K + Sbjct: 146 ALKAVLDDRHARLQPAMG----VVQPAGGRYVIATYHPSFVLRVPDPDARKRAYA 196 >gi|126456772|ref|YP_001077044.1| uracil-DNA glycosylase [Burkholderia pseudomallei 1106a] gi|167916534|ref|ZP_02503625.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 112] gi|242312175|ref|ZP_04811192.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 1106b] gi|254187088|ref|ZP_04893603.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei Pasteur 52237] gi|126230540|gb|ABN93953.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 1106a] gi|157934771|gb|EDO90441.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei Pasteur 52237] gi|242135414|gb|EES21817.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 1106b] Length = 218 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 71/175 (40%), Gaps = 13/175 (7%) Query: 84 LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143 L + C L + + +M++G P + ++ G PF G G +L++ L + Sbjct: 26 LDACRRCGLWEHATQAVPGAGPPRAAIMLVGEQPGNQEDREGAPFVGPAGRVLERALAAA 85 Query: 144 EIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 + R ++++ ++ + E++ CR + R+++ + P++++ +G Sbjct: 86 GLDRASVYVTNAVKHFKWAPRGKRRMHKTPAQQEIDACRYWLERELDALEPRVVVALGAI 145 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKKNTWH 249 ++ + +G + +AT HP +++ P +K + Sbjct: 146 ALKAVLDDRHARLQPAMG----VVQSAGGRYVIATYHPSFVLRVPDPDARKRAYA 196 >gi|163851729|ref|YP_001639772.1| uracil-DNA glycosylase superfamily protein [Methylobacterium extorquens PA1] gi|163663334|gb|ABY30701.1| Uracil-DNA glycosylase superfamily [Methylobacterium extorquens PA1] Length = 485 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 71/210 (33%), Gaps = 14/210 (6%) Query: 41 RKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI 100 + I+ + P+ A + SL L +++ L + + Sbjct: 261 AASARAQAMIEKEPTMPVKRDPVRAVAKMAQDEPDSLEALNAIIARSE--PLVPGATQAV 318 Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160 G + +G P D ++ GKPF G G +L + L+ I R + +++ Sbjct: 319 LGEGPVGARIAFVGEQPGDQEDRQGKPFVGPAGQLLSRALEEAGIDRGEAYLTNAVKHFK 378 Query: 161 PG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL 213 + + E+ R + ++++ ++PK+++ +G + Sbjct: 379 FTLRGKRRIHEKPTAGEVSHYRWWLEKELDFVAPKLVVALGATAVLSLTG-KQIPITRAR 437 Query: 214 GKWSNLCTPHSIIPTLATVHPQELIQYPLI 243 G TVHP L++ P Sbjct: 438 GP----AEFGRPFAGFITVHPSYLLRLPDE 463 >gi|254561501|ref|YP_003068596.1| uracil-DNA glycosylase superfamily protein [Methylobacterium extorquens DM4] gi|254268779|emb|CAX24740.1| Uracil-DNA glycosylase superfamily protein (DNA replication, recombination and repair) [Methylobacterium extorquens DM4] Length = 485 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 71/210 (33%), Gaps = 14/210 (6%) Query: 41 RKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI 100 + I+ + P+ A + SL L +++ L + + Sbjct: 261 AASARAQAMIEKEPTMPVKRDPVRAVAKMAQDEPDSLEALNAIIARSE--PLVPGATQAV 318 Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160 G + +G P D ++ G+PF G G +L + L+ I R + +++ Sbjct: 319 LGEGPVGARIAFVGEQPGDQEDRQGRPFVGSAGQLLSRALEEAGIDRGEAYLTNAVKHFK 378 Query: 161 PG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL 213 + + E+ R + ++++ ++PK+++ +G + Sbjct: 379 FTLRGKRRIHEKPTAGEVSHYRWWLEKELDFVAPKLVVALGATAVLSLTG-KQIPITRAR 437 Query: 214 GKWSNLCTPHSIIPTLATVHPQELIQYPLI 243 G TVHP L++ P Sbjct: 438 GP----AEFGRPFAGFITVHPSYLLRLPDE 463 >gi|326204227|ref|ZP_08194087.1| Uracil-DNA glycosylase superfamily [Clostridium papyrosolvens DSM 2782] gi|325985738|gb|EGD46574.1| Uracil-DNA glycosylase superfamily [Clostridium papyrosolvens DSM 2782] Length = 219 Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 72/197 (36%), Gaps = 17/197 (8%) Query: 75 CSLHELK-SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 SL +L ++ F + ++IIG P + GKPF G G Sbjct: 8 NSLEQLCCQYVQEFKH-------KEIVLGHGCIDSPVVIIGEAPGKDEVKQGKPFVGAAG 60 Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI---------EMEICRPIIMRQIEL 184 L++ ++ +EI R ++I+ + ++ +++ + + ++I L Sbjct: 61 KNLNEFIEVLEISRDDLYITNAIKYRLGRLNPKTDRIVNRPATMKDIKENQIWLHKEIHL 120 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK 244 I P I++ +GN +N GK + HP +I +K Sbjct: 121 IKPHIIVTLGNVPLKAITSNFGISIGDMHGKLHECNLSGKVYKLFPLYHPASIIYNRALK 180 Query: 245 KNTWHALITLKKALKNL 261 +I LK+ + L Sbjct: 181 AVYKQDMIMLKQEVNKL 197 >gi|313682493|ref|YP_004060231.1| uracil-DNA glycosylase superfamily [Sulfuricurvum kujiense DSM 16994] gi|313155353|gb|ADR34031.1| Uracil-DNA glycosylase superfamily [Sulfuricurvum kujiense DSM 16994] Length = 223 Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 77/186 (41%), Gaps = 6/186 (3%) Query: 74 ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 SL E+ + C L + ++ LM + S +++ S + + G++G Sbjct: 42 PDSLGEINQNIAQCFLCDLSKSRRQSMSGYGNIKAQLMFVDAYVSAAEDESSEYYVGRSG 101 Query: 134 NMLDKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192 ML M++ + + ++ + P G +N S E C P + +QIELI P+I++ Sbjct: 102 VMLRDMIEKVLNLKIEEVFFTHAVKCKPFGFQNPSPSECSSCAPFLSKQIELIKPRIIIP 161 Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 +G + D + G+ P+ + HP L++ P KK L Sbjct: 162 LGADAYR-ILSGDHGDFERVRGEI----IPYGDSQLIPMHHPLYLVRNPSCKKEAMRDLQ 216 Query: 253 TLKKAL 258 T+K L Sbjct: 217 TIKSQL 222 >gi|167908191|ref|ZP_02495396.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei NCTC 13177] gi|254192575|ref|ZP_04899014.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei S13] gi|169649333|gb|EDS82026.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei S13] Length = 223 Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 71/175 (40%), Gaps = 13/175 (7%) Query: 84 LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143 L + C L + + +M++G P + ++ G PF G G +L++ L + Sbjct: 31 LDACRRCGLWEHATQAVPGAGPPRAAIMLVGEQPGNQEDREGAPFVGPAGRVLERALAAA 90 Query: 144 EIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 + R ++++ ++ + E++ CR + R+++ + P++++ +G Sbjct: 91 GLDRASVYVTNAVKHFKWAPRGKRRMHKTPAQQEIDACRYWLERELDALEPRVVVALGAI 150 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKKNTWH 249 ++ + +G + +AT HP +++ P +K + Sbjct: 151 ALKAVLDDRHARLQPAMG----VVQSAGGRYVIATYHPSFVLRVPDPDARKRAYA 201 >gi|240138893|ref|YP_002963368.1| Uracil-DNA glycosylase superfamily protein (DNA replication, recombination and repair) [Methylobacterium extorquens AM1] gi|240008865|gb|ACS40091.1| Uracil-DNA glycosylase superfamily protein (DNA replication, recombination and repair) [Methylobacterium extorquens AM1] Length = 485 Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 71/210 (33%), Gaps = 14/210 (6%) Query: 41 RKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI 100 + I+ + P+ A + SL L +++ L + + Sbjct: 261 AASARAQAMIEKEPTMPVKRDPVRAVAKMAQDEPDSLEALNAIIARSE--PLVPGATQAV 318 Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160 G + +G P D ++ GKPF G G +L + L+ I R + +++ Sbjct: 319 LGEGPVGARIAFVGEQPGDQEDRQGKPFVGPAGQLLSRALEEAGIDRGEAYLTNAVKHFK 378 Query: 161 PG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL 213 + + E+ R + ++++ ++PK+++ +G + Sbjct: 379 FTLRGKRRIHEKPTAGEVSHYRWWLEKELDFVAPKLVVALGATAVLSLTG-KQIPITRAR 437 Query: 214 GKWSNLCTPHSIIPTLATVHPQELIQYPLI 243 G TVHP L++ P Sbjct: 438 GP----AEFGRPFAGFITVHPSYLLRLPDE 463 >gi|296283964|ref|ZP_06861962.1| Uracil-DNA glycosylase:Phage SPO1 DNA polymerase-related protein [Citromicrobium bathyomarinum JL354] Length = 477 Score = 118 bits (296), Expect = 7e-25, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 72/223 (32%), Gaps = 14/223 (6%) Query: 24 VYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSL 83 V + E + + + + + SL + Sbjct: 232 VGAMLSEMPRKYWKNLPEAALIPELIAGAQQRESEMVAAGE---RDDGSRPESLEAIGEA 288 Query: 84 LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143 + C + + LMI+G P D ++ G+PF G G +LD L+ Sbjct: 289 IEGCRKCPIGCLDNRAVMGEGPSDAALMIVGEQPGDHEDQEGRPFVGPAGQLLDVHLERA 348 Query: 144 EIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 I R+ +++ +++ + E++ CR I + EL+ PK++L +G Sbjct: 349 GINRSAAYVTNAVKHFKFTMRGKRRLHQSPTAKEIDTCRWWIEGERELVKPKLVLAMGAS 408 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 + G+ L T HP L++ Sbjct: 409 AARGMLG-KTVSISKVRGQAIPLEDGSE---LWVTSHPSYLLR 447 >gi|328886739|emb|CCA59978.1| Uracil-DNA glycosylase, putative family 6 [Streptomyces venezuelae ATCC 10712] Length = 220 Score = 118 bits (296), Expect = 7e-25, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 61/170 (35%), Gaps = 12/170 (7%) Query: 81 KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML 140 ++ C L + T+ LM++G P D ++ G PF G G +L + L Sbjct: 30 RAAAAGCQGCPLHRDATGTVFGRGDPHARLMLVGEQPGDQEDREGVPFVGPAGRLLSRAL 89 Query: 141 QSIEIMRTQIHISMISPWHPPGNRNLSN---------IEMEICRPIIMRQIELISPKILL 191 + I ++++ E CRP +M ++ L+SP++++ Sbjct: 90 REAGIDEEGLYVTNAVKHFKFTEDATRKRRIHKAPSLRETLACRPWLMAELRLVSPELVV 149 Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI--IPTLATVHPQELIQ 239 +G + G L LATVHP +++ Sbjct: 150 TLGATAGRALLGPSFRVGAD-RGVPRPLTDAGEGTDTRVLATVHPSAVLR 198 >gi|300710100|ref|YP_003735914.1| phage SPO1 DNA polymerase-related protein [Halalkalicoccus jeotgali B3] gi|299123783|gb|ADJ14122.1| phage SPO1 DNA polymerase-related protein [Halalkalicoccus jeotgali B3] Length = 200 Score = 118 bits (295), Expect = 8e-25, Method: Composition-based stats. Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 2/163 (1%) Query: 84 LRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142 + C L + + T E DL+I+G P + ++ G+PF G++G LD+ L++ Sbjct: 9 VTECECCPALVESRSRIVNGTGPEDADLLIVGEGPGEQEDEEGEPFVGRSGTQLDEKLRA 68 Query: 143 IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202 I R + I+ PP NR+ + E+E CR + R+IEL+ P +++ +G Sbjct: 69 HGIAREDVRITNCVRCRPPENRDPTKEELENCRGYLEREIELVDPALIMTVGKVPTEHLL 128 Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK 245 D T + G L +VHP ++ ++ Sbjct: 129 ERDVAVTKEA-GSVVEHRIGGESRRVLISVHPAAMLYDRSQEE 170 >gi|89054559|ref|YP_510010.1| uracil-DNA glycosylase superfamily protein [Jannaschia sp. CCS1] gi|88864108|gb|ABD54985.1| Uracil-DNA glycosylase superfamily [Jannaschia sp. CCS1] Length = 465 Score = 118 bits (295), Expect = 8e-25, Method: Composition-based stats. Identities = 34/220 (15%), Positives = 78/220 (35%), Gaps = 21/220 (9%) Query: 55 NIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIG 114 + S QQ + S + ++ C L + T+ LMI+G Sbjct: 238 PPTRMASAQEQQRAFASSWEGSDDAFLAAVKGCTRCPLHRHATQTVPGEGPAKAALMIVG 297 Query: 115 YTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLS 167 P D +++ G+PF G G++ D++ + + R +I+ ++ + Sbjct: 298 EQPGDQEDLQGRPFVGPAGHVFDQVAAEVGLDRATAYITNAVKHFKFVPRGKRRLHQRPN 357 Query: 168 NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227 E+ C+ + +I ++PK++L +G+ + G + P Sbjct: 358 AGEVAYCKWWLEAEIARVTPKLILAMGSTAALALTG-SGNNLLKRCGTIEAVAGRP---P 413 Query: 228 TLATVHPQELIQ--YPLIKKNTWH----AL----ITLKKA 257 L ++HP +++ + L +++ Sbjct: 414 VLISLHPSYILRIKDADQRAEARQMYQRDLGRATQMVQER 453 >gi|256397876|ref|YP_003119440.1| uracil-DNA glycosylase superfamily [Catenulispora acidiphila DSM 44928] gi|256364102|gb|ACU77599.1| Uracil-DNA glycosylase superfamily [Catenulispora acidiphila DSM 44928] Length = 222 Score = 118 bits (295), Expect = 9e-25, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 73/214 (34%), Gaps = 31/214 (14%) Query: 76 SLHELKSLLRSFHDCHLCSTS-------LSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128 S+ L++ S C L T+ + ++ +G P D ++ G PF Sbjct: 10 SIDALRTAALSCQGCELHQAQPGSLSGPTQTVFSKGNPAARVVFVGEQPGDMEDRQGVPF 69 Query: 129 SGKTGNMLDKMLQSIEIMRTQIHISMISPW------HPPGNRNLSNIEM---EICRPIIM 179 G G + D+ + I Q +++ P G R E E C+P + Sbjct: 70 VGPAGQLFDRAMADAGIDPRQAYVTNSVKHFRFLQDRPNGRRIHKTPETPHIEACKPWLR 129 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH-----------SIIPT 228 ++ ++ P++++ +G + + GK + Sbjct: 130 AELAIVDPEVIVALGATAGRALIGPQFRV-TRERGKVLMWPPSGDAGFGTDPSRRRAVSF 188 Query: 229 LATVHPQELIQYPLIK---KNTWHALITLKKALK 259 +AT HP +++ + K L+ + + L Sbjct: 189 VATSHPSAVLRADNQETAYKEMVSDLLLVARLLA 222 >gi|295698946|ref|YP_003606839.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp. CCGE1002] gi|295438159|gb|ADG17328.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp. CCGE1002] Length = 220 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 28/203 (13%), Positives = 75/203 (36%), Gaps = 16/203 (7%) Query: 59 IHSPLVQQADSIAQKAC---SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115 P ++A AQ + + L C L + + ++++G Sbjct: 2 TDRPQKKRARGDAQSEPADVEPDQHPAKLGDCRRCALWRNATQAVPGEGQRHASIVLVGE 61 Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRNLSN 168 P D +++ GKPF G G +LD+ L+ + R ++++ ++ + Sbjct: 62 QPGDMEDLQGKPFVGPAGALLDRALEEAGVKRNDVYVTNAVKHFKWIARGKRRLHKTPAQ 121 Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT 228 E++ C + +++++ ++++ +G ++ + + Sbjct: 122 REVDACSYWLEQELDMPDVRVVVALGATALKAVVDDPHARLQDA----FDKTLERGEQRV 177 Query: 229 LATVHPQELIQ--YPLIKKNTWH 249 +AT HP ++ P ++ + Sbjct: 178 VATYHPSFALRAPDPETRREVYQ 200 >gi|187735058|ref|YP_001877170.1| phage SPO1 DNA polymerase-related protein [Akkermansia muciniphila ATCC BAA-835] gi|187425110|gb|ACD04389.1| phage SPO1 DNA polymerase-related protein [Akkermansia muciniphila ATCC BAA-835] Length = 324 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 41/219 (18%), Positives = 89/219 (40%), Gaps = 18/219 (8%) Query: 50 IQPITNIRHIHSPLVQQADSIAQKACS-LHELKSLLRSFHDCHLCST---SLSTICATQT 105 +QP P D + L L+ L+ ++ L + + + ++ Sbjct: 94 VQPHRTEEDAPVPRHISFDLEGETEEEKLSSLRELVVNWP--PLRNMDSLRETPVFSSGN 151 Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP----- 160 D+M++ P + G P +G +G LD ML+++ + R+ I+++ + + P Sbjct: 152 PRADIMMVTDAPGLYEEKQGVPLAGPSGQKLDAMLKAMGLSRSDIYLTHLVKYRPALPRQ 211 Query: 161 -PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 NR ++ E+EI PI+ +I L+ PK+++ +G + + G + Sbjct: 212 LTNNRPPTDREIEISLPILREEIMLVRPKVVVALGAISARGILQSGETPLSALRGTFHTA 271 Query: 220 CTPHSIIPTLATVHPQELIQYP--LIKKNTWHALITLKK 256 P T +P L++ K+ W ++ + + Sbjct: 272 FN----TPVRVTYNPSYLLRTEDISEKRKVWEDMLCVME 306 >gi|322368254|ref|ZP_08042823.1| phage SPO1 DNA polymerase-related protein [Haladaptatus paucihalophilus DX253] gi|320552270|gb|EFW93915.1| phage SPO1 DNA polymerase-related protein [Haladaptatus paucihalophilus DX253] Length = 195 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 72/170 (42%), Gaps = 4/170 (2%) Query: 76 SLHELKSLLRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 ++ L + C L + E D++ IG P ++ G+PF G++G+ Sbjct: 3 TMEGLD--VTDCTRCPALVECRSQIVNGVGPEDADVLFIGEAPGAREDERGEPFVGRSGS 60 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 +LD+ L+ + R + I+ PP NR+ + E+ CR + R+IEL+ P +++ +G Sbjct: 61 VLDEKLRDRGLSRADVRITNCVRCRPPENRDPTTEELGNCREYLEREIELVDPDVIVTLG 120 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK 244 + D T + G + + L +HP + + Sbjct: 121 KVPSQHVLDRDVAVTNEA-GSIEAVELGGTKRDVLVCLHPAATLYDRSQE 169 >gi|254296522|ref|ZP_04963978.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 406e] gi|157806362|gb|EDO83532.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 406e] Length = 218 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 70/175 (40%), Gaps = 13/175 (7%) Query: 84 LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143 L + C L + + +M++G P + ++ G PF G G +L++ L + Sbjct: 26 LDACRRCGLWEHATQAVPGAGPPRAAIMLVGEQPGNQEDREGAPFVGPAGRVLERALAAA 85 Query: 144 EIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 + R ++++ ++ + E++ CR + R+++ + ++++ +G Sbjct: 86 GLDRASVYVTNAVKHFKWAPRGKRRMHKTPAQQEIDACRYWLERELDALGQRVVVALGAI 145 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKKNTWH 249 ++ + +G + +AT HP +++ P +K + Sbjct: 146 ALKAVLDDRHARLQSAMG----VVQSAGGRYVIATYHPSFVLRVPDPDARKRAYA 196 >gi|20092394|ref|NP_618469.1| uracil-DNA glycosylase [Methanosarcina acetivorans C2A] gi|19917647|gb|AAM06949.1| uracil-DNA glycosylase [Methanosarcina acetivorans C2A] Length = 203 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 66/163 (40%), Gaps = 8/163 (4%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 + + C L ++ + + +M IG P +++ +G PF+G+ G LD Sbjct: 30 ETVAREAIACTRCPLHKSATKRVIGKGSCNPKVMFIGEAPGKTEDETGIPFNGRAGKKLD 89 Query: 138 KMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197 KM++ + + ++ PP NR E+E C+P ++ QI L+ P+I++ +GN Sbjct: 90 KMVEYMGLSEEDWFVANTVKCRPPENRRPKASEIECCKPFLIAQITLLDPEIIILLGNTA 149 Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 + + + L HP LI Sbjct: 150 EKA--------YCPERKLERGVPVEYEGRMILKLYHPAALIYT 184 >gi|48478092|ref|YP_023798.1| DNA polymerase [Picrophilus torridus DSM 9790] gi|48430740|gb|AAT43605.1| DNA polymerase, bacteriophage-type [Picrophilus torridus DSM 9790] Length = 360 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 73/169 (43%), Gaps = 9/169 (5%) Query: 93 CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHI 152 S + + +++ +G P +++ +PF G++G +L+ ML I I R ++I Sbjct: 198 WRLSRNFVPGEGNYNAEIVFVGQAPGKTEDEMKRPFVGRSGRILNSMLSMININRESVYI 257 Query: 153 SMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN 212 + + ++P NR E++ C P + RQ+++ISPKI++ +G + N Sbjct: 258 TSVVQFYPEKNRVPDKSEIDACFPYLKRQLDVISPKIIVILGRIAAQSLLGIN--DIKNN 315 Query: 213 LGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 G N T HP ++ + + I LK + + Sbjct: 316 HGTIINKRY-------FITYHPAAALRSKAVLGKMENDFIKLKNEINRI 357 >gi|312796449|ref|YP_004029371.1| uracil DNA glycosylase superfamily protein [Burkholderia rhizoxinica HKI 454] gi|312168224|emb|CBW75227.1| Uracil DNA glycosylase superfamily protein [Burkholderia rhizoxinica HKI 454] Length = 523 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 75/216 (34%), Gaps = 21/216 (9%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P A S + + S ++ +T I Q+A SL E C Sbjct: 267 PAMIADARSGTRRMAQASTVRAMTGKPVIVDA--QRARPSRPVPSSLDE-------CRRC 317 Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150 L + + E +M+IG P D ++++G+ F G G +LD+ L+ + R + Sbjct: 318 ELWRNATQAVPGHGPETARMMLIGEQPGDYEDLAGRAFVGPAGQVLDEALRRAGVPRDTV 377 Query: 151 HISMIS---PWHPPGNRNLS----NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 ++ W G R L E++ C + ++ + P +++ +G Sbjct: 378 FLTNAVKHFKWLAHGKRRLHKTPAQREIDACAHWLEHELARVRPAVIVTLGATALRAVLR 437 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 + +AT HP ++ Sbjct: 438 RNVNMQDYLH-----APVRLGDTWLVATWHPSYALR 468 >gi|21226588|ref|NP_632510.1| DNA polymerase [Methanosarcina mazei Go1] gi|20904864|gb|AAM30182.1| DNA polymerase [Methanosarcina mazei Go1] Length = 197 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 8/163 (4%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 + + + C L +++ + + + IG P +S+N SG PF G+ G LD Sbjct: 24 ETVAREIIACIRCPLHESAIKRVIGKGSCNPKVFFIGEAPGESENKSGIPFYGRAGKKLD 83 Query: 138 KMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197 +M++ + + ++ PPGNR E+E C+P ++ QI L++PK+++ +GN Sbjct: 84 QMVEYMGLSEEDWFVTNTVKCRPPGNRKPRVQEIECCKPFLIAQITLLNPKLIILLGNTA 143 Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 + F + + H L HP LI Sbjct: 144 EKSFCPERKLEW--------GVPVEHEGRTILKLYHPAALIYT 178 >gi|289581122|ref|YP_003479588.1| phage SPO1 DNA polymerase-related protein [Natrialba magadii ATCC 43099] gi|289530675|gb|ADD05026.1| phage SPO1 DNA polymerase-related protein [Natrialba magadii ATCC 43099] Length = 200 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 39/174 (22%), Positives = 77/174 (44%), Gaps = 2/174 (1%) Query: 84 LRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142 + C L + + T E D++ +G P ++ G+PF G++G++LD L+ Sbjct: 9 VTECERCPALVDSRSQIVNGTGPEDADILFVGEGPGAQEDSQGEPFVGRSGSVLDDQLRI 68 Query: 143 IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202 + + R + I+ PP NR+ + E+E CR + ++IEL+ P +++ +G Sbjct: 69 VGLDRDTVRITNCVRCRPPENRDPTTDELENCRSYLEQEIELLDPDVIVTLGKVPTEHLL 128 Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 + D T + G ++ + L VHP + ++ AL + Sbjct: 129 DRDVAVTKEA-GSVEDVRVNGTPRRLLICVHPAATLYDRSQEETFESALERAAE 181 >gi|108803651|ref|YP_643588.1| phage SPO1 DNA polymerase-like protein [Rubrobacter xylanophilus DSM 9941] gi|108764894|gb|ABG03776.1| phage SPO1 DNA polymerase-related protein [Rubrobacter xylanophilus DSM 9941] Length = 209 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 71/187 (37%), Gaps = 7/187 (3%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 E + C LC + + L ++G P +++ +G+PF G +G + Sbjct: 2 EFAEAQKEALECTRCGLCQSRTRVVFGEGPLNARLFVVGEAPGHNEDAAGRPFQGASGML 61 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRN--LSNIEMEICRPIIMRQIELISPKILLFI 193 L+ +L S+ + R +++++ + PPG E+ CR ++ Q+ + PK+++ + Sbjct: 62 LEGLLGSVGLSREEVYLTTLVKCRPPGTPPRSPRPSEVSSCRRYLISQLVAVDPKVVVAL 121 Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253 G + G+ P + T Q + P + Sbjct: 122 GELPSKILTGRKESLR-RIRGR----AIPLDGRYVIPTFSLQRALYVPADRALLISDFSR 176 Query: 254 LKKALKN 260 L + L+ Sbjct: 177 LPELLEA 183 >gi|217424128|ref|ZP_03455627.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 576] gi|217392593|gb|EEC32616.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 576] Length = 218 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 70/175 (40%), Gaps = 13/175 (7%) Query: 84 LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143 L + C L + + +M++G P + ++ G PF G G +L++ + Sbjct: 26 LDACRRCGLWEHATQAVPGAGPPRAAIMLVGEQPGNQEDREGAPFVGPAGRVLERAPAAA 85 Query: 144 EIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 + R ++++ ++ + E++ CR + R+++ + P++++ +G Sbjct: 86 GLDRASVYVTNAVKHFKWAPRGKRRMHKTPAQQEIDACRYWLERELDALGPRVVVALGAI 145 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKKNTWH 249 ++ + +G + +AT HP +++ P +K + Sbjct: 146 ALKAVLDDRHARLQSAMG----VVQSAGGRYVIATYHPSFVLRVPDPDARKRAYA 196 >gi|169236672|ref|YP_001689872.1| uracil-DNA glycosylase-like protein [Halobacterium salinarum R1] gi|167727738|emb|CAP14526.1| uracil-DNA glycosylase homolog [Halobacterium salinarum R1] Length = 193 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 65/164 (39%), Gaps = 2/164 (1%) Query: 87 FHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI 145 C L + + D++ IG P +++ +G PF G++G++LD L + + Sbjct: 10 CTRCDALVESRSQVVNGDGPSDADVLFIGEAPGATEDDTGVPFVGRSGDVLDDELAAAGL 69 Query: 146 MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 R + I+ PP NR+ + E+ CR ++ +++ + P +++ +G Sbjct: 70 AREDVRITNCVRCRPPDNRDPHSEELANCRSHLVAEVDSVDPAVIVTLGKVPSEHVLERS 129 Query: 206 AQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249 T + G + + + +HP + + Sbjct: 130 VAVTGEA-GSVERVSLGGTTRDVVVCLHPAATLYDASQRPAFRE 172 >gi|15790926|ref|NP_280750.1| DNA polymerase bacteriophage-type [Halobacterium sp. NRC-1] gi|10581499|gb|AAG20230.1| DNA polymerase bacteriophage-type [Halobacterium sp. NRC-1] Length = 203 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 65/164 (39%), Gaps = 2/164 (1%) Query: 87 FHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI 145 C L + + D++ IG P +++ +G PF G++G++LD L + + Sbjct: 20 CTRCDALVESRSQVVNGDGPSDADVLFIGEAPGATEDDTGVPFVGRSGDVLDDELAAAGL 79 Query: 146 MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 R + I+ PP NR+ + E+ CR ++ +++ + P +++ +G Sbjct: 80 AREDVRITNCVRCRPPDNRDPHSEELANCRSHLVAEVDSVDPAVIVTLGKVPSEHVLERS 139 Query: 206 AQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249 T + G + + + +HP + + Sbjct: 140 VAVTGEA-GSVERVSLGGTTRDVVVCLHPAATLYDASQRPAFRE 182 >gi|222478815|ref|YP_002565052.1| phage SPO1 DNA polymerase-related protein [Halorubrum lacusprofundi ATCC 49239] gi|222451717|gb|ACM55982.1| phage SPO1 DNA polymerase-related protein [Halorubrum lacusprofundi ATCC 49239] Length = 204 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 75/172 (43%), Gaps = 4/172 (2%) Query: 79 ELKSLLRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 +L+ + S C L + + DL+ +G P ++ G+PF G++G++LD Sbjct: 11 DLR--VPSCERCPALVESRSRIVDGVGPTDADLLFVGEGPGAQEDERGEPFVGRSGDVLD 68 Query: 138 KMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197 L+ + R + I+ PP NR+ + E+ CR + +I+ + P++++ +G Sbjct: 69 DALRDAGLARADVRITNCVRCRPPDNRDPTTEELANCRGYLDAEIDRLDPELIVTLGKVP 128 Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249 + T ++ G+ ++ + L +VHP + + + Sbjct: 129 SEHLLDRSVAITSES-GEVVDVRIAGASRRVLLSVHPAATLYDRSQRDGFFE 179 >gi|119717845|ref|YP_924810.1| phage SPO1 DNA polymerase-related protein [Nocardioides sp. JS614] gi|119538506|gb|ABL83123.1| phage SPO1 DNA polymerase-related protein [Nocardioides sp. JS614] Length = 216 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 75/189 (39%), Gaps = 18/189 (9%) Query: 86 SFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI 145 + C L + + DLM++G P D ++ G+PF G G +LD+ L + I Sbjct: 27 ACRGCELYRDATQAVMGDGRRDADLMLLGEQPGDREDRVGEPFVGPAGKVLDEALAEVGI 86 Query: 146 MRTQIHISMISP-WHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197 ++ + + + G +++ S + C P + ++ L+ P ++ +G Sbjct: 87 APADVYTTNVVKHFRWSGTRGKQRIHKSPSRAHVAACGPWLEAELRLVRPTGVVLLGGTA 146 Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIP----TLATVHPQELIQYPLIKKNTWH---- 249 + + ++ G+ + + LAT HP +++ +++ + Sbjct: 147 GKAVYGA-GFRVGESRGRIHDWPASFPVARPPAWVLATTHPSAVLRA-DDRRSAYEGLVA 204 Query: 250 ALITLKKAL 258 L + + L Sbjct: 205 DLRVVAQRL 213 >gi|330991819|ref|ZP_08315768.1| phage SPO1 DNA polymerase-like protein [Gluconacetobacter sp. SXCC-1] gi|329760840|gb|EGG77335.1| phage SPO1 DNA polymerase-like protein [Gluconacetobacter sp. SXCC-1] Length = 215 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 10/195 (5%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 +L EL + +R F C L T+ ++ +G LM+IG P ++ SG PF+G++G + Sbjct: 18 TLAELHAAMRDFSACPLRETATHSVGVEGPQGAPLMLIGEAPDADEDRSGHPFAGESGAL 77 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 + M SI I + + + PW PPG R E IC P I R I L P ++ +GN Sbjct: 78 VGAMFASIGIAWDSLLRAPVIPWRPPGGRPPYEAETRICLPFIQRAIILARPAHVIVMGN 137 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSI---------IPTLATVHPQELIQYPLIKKN 246 + G+W +L P +P LA HPQ+L +++ Sbjct: 138 LPV-SLLLEGGATAARMRGRWRSLTLPAHGLPPTASAPSVPVLAMRHPQQLRASATARRD 196 Query: 247 TWHALITLKKALKNL 261 TW ++++++ L N+ Sbjct: 197 TWRDMLSIRETLGNM 211 >gi|284989415|ref|YP_003407969.1| phage SPO1 DNA polymerase-like protein [Geodermatophilus obscurus DSM 43160] gi|284062660|gb|ADB73598.1| phage SPO1 DNA polymerase-related protein [Geodermatophilus obscurus DSM 43160] Length = 223 Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 73/209 (34%), Gaps = 27/209 (12%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L L++ C L + T+ E ++ +G P D ++ G+PF G G +L Sbjct: 16 LDGLRAAAAGCRACELWEGTTQTVFGEGPETARIVFVGEQPGDQEDRRGEPFVGPAGRLL 75 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKI 189 DK L I R +I+ ++ + CRP + + ++ P++ Sbjct: 76 DKALAEAGIDRRDAYITNAVKHFRFKPTGKRRIHQTPGPEHLRACRPWLEAEFAVLQPEV 135 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH--------------SIIPTLATVHPQ 235 ++ +G + + + + G+ P LAT HP Sbjct: 136 VVCLGATAAKALISP-SFRITKERGQLFPWTPPGADTLFAAADDEEAPHQTWMLATTHPS 194 Query: 236 ELIQYPLIKKNT-----WHALITLKKALK 259 +++ P ++ L + AL Sbjct: 195 AILRTPDEARDAAYDALVADLRVVAHALA 223 >gi|317407476|gb|EFV87432.1| uracil-DNA glycosylase, family 4 [Achromobacter xylosoxidans C54] Length = 220 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 63/168 (37%), Gaps = 11/168 (6%) Query: 82 SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 L C L + + +M++G P D ++++G PF G G +LDK L Sbjct: 22 RKLADCRRCGLWRNATQAVGGEGKRRATIMLVGEQPGDKEDLAGHPFVGPAGALLDKALA 81 Query: 142 SIEIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 + R ++I+ +++ + E+ C + ++++ I P++++ +G Sbjct: 82 RAGVSRDAVYITNAVKHFKWQLRGKRRMHKSPAQAEIAACGYWLEQELDDIRPRVIIALG 141 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL 242 + LG+ P L HP ++ P Sbjct: 142 ATALGALVPDRKLTLKAALGQ----SLRRGNTPVLVAYHPSFALRSPD 185 >gi|332672024|ref|YP_004455032.1| phage SPO1 DNA polymerase-like protein [Cellulomonas fimi ATCC 484] gi|332341062|gb|AEE47645.1| phage SPO1 DNA polymerase-related protein [Cellulomonas fimi ATCC 484] Length = 210 Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats. Identities = 23/160 (14%), Positives = 66/160 (41%), Gaps = 11/160 (6%) Query: 87 FHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM 146 C L + + + ++ + ++++G P D ++ G+PF G G +LD+ L+ + Sbjct: 29 CRGCELWAPATQVVFSSGSPRAAIVLVGEQPGDREDREGEPFVGPAGRLLDEALEEAGVA 88 Query: 147 RTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199 R ++++ ++ + + C P + ++ + P++++ +G Sbjct: 89 RDDVYVTNAVKHFRFVERGPRRLHKTPAVAHIRACLPWLEAELAAVRPRVVVALGATAAR 148 Query: 200 FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 +D G+ + + + + T HP +++ Sbjct: 149 AVLGHDVTV-GDVRGQVLD---GPAGVRVVVTAHPAAILR 184 >gi|163857286|ref|YP_001631584.1| putative DNA polymerase bacteriophage-type [Bordetella petrii DSM 12804] gi|163261014|emb|CAP43316.1| putative DNA polymerase bacteriophage-type [Bordetella petrii] Length = 204 Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 80/207 (38%), Gaps = 15/207 (7%) Query: 66 QADSIAQKACSLH--ELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123 QA + + + + L+ C L + + +M++G P D +++ Sbjct: 2 QAPDGREASDDIDPDQQPRRLQDCRRCGLWRDATQPVAGAGKRSARIMLVGEQPGDKEDL 61 Query: 124 SGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRP 176 +G+PF G G +LD+ LQ+ + R ++++ ++ + E+E C Sbjct: 62 AGQPFVGPAGALLDRALQAAGVPREAVYVTNAVKHFKWQARGKRRMHKTPAQREIEACHY 121 Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236 + ++ + P++++ +G LG+ H + +A HP Sbjct: 122 WLEDELRAVRPRVVVALGATALRSVMQAKPPALKAVLGR----ALEHDGMAVIAAYHPSF 177 Query: 237 LIQYPL--IKKNTWHALITLKKALKNL 261 ++ P ++ + A++ + L Sbjct: 178 ALRAPDTQARRRAFEAIVQALERAARL 204 >gi|300021879|ref|YP_003754490.1| uracil-DNA glycosylase superfamily [Hyphomicrobium denitrificans ATCC 51888] gi|299523700|gb|ADJ22169.1| Uracil-DNA glycosylase superfamily [Hyphomicrobium denitrificans ATCC 51888] Length = 469 Score = 115 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 83/234 (35%), Gaps = 23/234 (9%) Query: 41 RKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI 100 + +D ++ +I SP S SL L ++ + + Sbjct: 243 AAARRVDDMLEAPPSISIKRSPERALLRSTGSPPLSLEALNEIITASDAF--VPGGTRAV 300 Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160 DL IG P D ++I G+PF G G + D+ L + I R + +I+ Sbjct: 301 LGEGPLRPDLAFIGEQPGDQEDIQGRPFVGPAGAIFDRALAASGISRAECYITNAVKHFK 360 Query: 161 PG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL 213 ++ ++ E++ R + +++++ PK+++ +G K ++ Sbjct: 361 YEQRGKRRIHQTPTHGEIKHYRWWLQEELKIVQPKLVVALGASAAFALAG-RPVKVSESR 419 Query: 214 GKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW-------HALITLKKALKN 260 G T +P + T+HP +++ K L + L Sbjct: 420 G-----LTKFDTVPAVLTIHPSYILRL-QDKAQAETEFAKFVADLNLARACLAE 467 >gi|255514104|gb|EET90367.1| phage SPO1 DNA polymerase-related protein [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 321 Score = 115 bits (287), Expect = 8e-24, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 80/203 (39%), Gaps = 7/203 (3%) Query: 60 HSPLVQQADSIAQKACSLHELK-SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPS 118 ++ A+ A+ + L R F S S + +M +G P Sbjct: 124 RGDIIASANRYAESKRQMDILNLEYSRLFDRFENWSLSSRFVPGEGPLDARIMFLGQAPG 183 Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPII 178 ++ + +PF G++G +L M++ + R + +I+ + + PP NR S+ E+++C+P + Sbjct: 184 SEEDKTLRPFVGRSGMLLTDMIKRAGLDRDKAYITSVVQFFPPRNRAPSSFEIDVCKPFL 243 Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238 +QI+++ P +++ +GN + T+HP + Sbjct: 244 FKQIDIVKPGLVVLLGNVAMLAVLGRTGVS------SMHGTVVEKDGVRYFITLHPSAAL 297 Query: 239 QYPLIKKNTWHALITLKKALKNL 261 + L +++L Sbjct: 298 RIKSKIPIIEADFKKLGSIVRDL 320 >gi|330817358|ref|YP_004361063.1| phage SPO1 DNA polymerase-related protein [Burkholderia gladioli BSR3] gi|327369751|gb|AEA61107.1| phage SPO1 DNA polymerase-related protein [Burkholderia gladioli BSR3] Length = 493 Score = 115 bits (287), Expect = 8e-24, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 81/215 (37%), Gaps = 14/215 (6%) Query: 46 IDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQT 105 S + + I + + A+ A + E S L + C L + + + Sbjct: 258 ARSGARRLAQASGIGTLNGKAIAVEAEVAQPVREQASSLDACRRCDLWRNATQAVGSAGP 317 Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPG 162 +M+IG P D +++SG+PF G G +LD ++ ++R Q++++ W P G Sbjct: 318 SSARIMLIGEQPGDQEDLSGQPFVGPAGQLLDLAIERAGLLRDQVYLTNAVKHFKWEPRG 377 Query: 163 ----NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218 ++ E+E C + +++ + P +++ +G A+ + N Sbjct: 378 KRRLHKTPMQREIEACHHWLEHELDTVRPAVIVALGATALTALLRRKAKLLD-----YLN 432 Query: 219 LCTPHSIIPTLATVHPQELIQYPLI--KKNTWHAL 251 + T HP ++ + + Sbjct: 433 APFEIDGGWAIVTYHPSFALRQQDDNSRDKVLDDM 467 >gi|292654621|ref|YP_003534518.1| uracil DNA glycosylase [Haloferax volcanii DS2] gi|291372686|gb|ADE04913.1| uracil DNA glycosylase [Haloferax volcanii DS2] Length = 198 Score = 115 bits (287), Expect = 8e-24, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 71/167 (42%), Gaps = 2/167 (1%) Query: 84 LRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142 + C L + + + DL+ +G P ++ G+PF G++G++LD L+ Sbjct: 9 VTGCERCPELVDSRSRIVNGVGPDDADLLFLGEAPGAKEDEGGEPFVGRSGSVLDDALRE 68 Query: 143 IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202 + R + I+ PP NR+ ++ E+ CR + R++EL+ P++++ +G Sbjct: 69 AGLARADVRITNCVRCRPPDNRDPTSDELSNCRGYLARELELVDPELVVTLGKVPSQHLL 128 Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249 + G + + L +VHP + ++ + Sbjct: 129 D-RGVAITNESGSVVDARVGDASYRVLLSVHPAATLYDRSQREGFFE 174 >gi|313127470|ref|YP_004037740.1| uracil-DNA glycosylase, family 4 [Halogeometricum borinquense DSM 11551] gi|312293835|gb|ADQ68295.1| uracil-DNA glycosylase, family 4 [Halogeometricum borinquense DSM 11551] Length = 200 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 76/168 (45%), Gaps = 3/168 (1%) Query: 84 LRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142 +R C L + + + DL+ +G P +++ G+PF G++G++LD L+ Sbjct: 11 VRECERCPELVESRSQIVNGVGPDDADLVFLGEAPGANEDEQGEPFVGRSGSVLDDALRD 70 Query: 143 IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202 + + R+ + I+ PP NR+ + E+ CR + R++EL+ P +++ +G Sbjct: 71 VGLARSDVRITNCVRCRPPENRDPTKTELGNCRGYLERELELLDPDLVVTLGKVPSEHLL 130 Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 + T + G ++ + L VHP + ++T+ Sbjct: 131 DRSVAVTKEA-GDVVDVRLGERLQRVLICVHPAATLYDRSQ-RDTFSD 176 >gi|91774250|ref|YP_566942.1| phage SPO1 DNA polymerase-related protein [Methanococcoides burtonii DSM 6242] gi|91713265|gb|ABE53192.1| Uracil DNA glycosylase [Methanococcoides burtonii DSM 6242] Length = 184 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 81/184 (44%), Gaps = 18/184 (9%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 +L ++ + C L T ++ + ++ ++ IG P ++ +G PF G+ G + Sbjct: 7 TLEGVEKDILDCTACPLSETVINKVVRKGSDEPKVLFIGEAPGKKEDETGVPFCGRAGKI 66 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 LD++++ + + + + PP NRN + E++ C+P ++RQI+L+ P +++ +GN Sbjct: 67 LDELIEYMGLESSDWAVINTIKCRPPNNRNPNKKELDCCKPFLIRQIQLLDPNLIVLLGN 126 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI----------QYPLIKK 245 + + + K G L + L HP LI ++ + Sbjct: 127 TAEKAYCSGHKMKW----GAVEMLEGKN----VLKIFHPAALIYTRSRTEDQHRFLDENR 178 Query: 246 NTWH 249 W Sbjct: 179 YIWE 182 >gi|220929816|ref|YP_002506725.1| uracil-DNA glycosylase [Clostridium cellulolyticum H10] gi|220000144|gb|ACL76745.1| Uracil-DNA glycosylase superfamily [Clostridium cellulolyticum H10] Length = 218 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 64/174 (36%), Gaps = 9/174 (5%) Query: 97 LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156 + + IIG P + GKPF G G L++ ++ +EI R ++I+ Sbjct: 24 KEIVLGHGCIDSPVAIIGEAPGKDEVKLGKPFVGAAGKNLNEFIEVLEISRDDLYITNAI 83 Query: 157 PWHPPGNRNLSNI---------EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207 + + +++ + + R+I ++ P+I++ +GN +N Sbjct: 84 KYRLGRLNPKTRRIVNRPATIKDIKENQIWLHREIHILKPQIIVTLGNVPLKAVTDNFRL 143 Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 G + HP +I +K ++ LKK +K L Sbjct: 144 SIGDMHGVLHECNLAGKVYKIFPLYHPASIIYNRTLKDVYHEDMMVLKKEIKKL 197 >gi|282862962|ref|ZP_06272022.1| Uracil-DNA glycosylase superfamily [Streptomyces sp. ACTE] gi|282561944|gb|EFB67486.1| Uracil-DNA glycosylase superfamily [Streptomyces sp. ACTE] Length = 225 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 76/207 (36%), Gaps = 27/207 (13%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 + L+ H C L + + T+ T +++G P D ++ SG+PF G G +L Sbjct: 20 IAALRRAAAGCHGCPLYADATQTVFGTGPVPARALLVGEQPGDQEDRSGEPFVGPAGGLL 79 Query: 137 DKMLQSIEIMRTQIHISMISPW----------HPPGNRNLSNIEMEICRPIIMRQIELIS 186 + L + + ++++ ++ E+ CRP + ++ + Sbjct: 80 RRALAAAGVDDRDVYLTNAVKHFKFAPVAEGRRRRIHKAPDLRELAACRPWLAAELRRVD 139 Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT-----------PHSIIPTLATVHPQ 235 P++++ +G +A K ++ G +L LATVHP Sbjct: 140 PELVVALGATAGKSVLG-NAFKVSESRGALLSLPPDEDLPLTAGEERPGGRRFLATVHPS 198 Query: 236 ELIQYPLIKKNTWH----ALITLKKAL 258 +++ + + L + L Sbjct: 199 AVLRA-RDRDEAFDGLVSDLRVAARFL 224 >gi|284166413|ref|YP_003404692.1| phage SPO1 DNA polymerase-related protein [Haloterrigena turkmenica DSM 5511] gi|284016068|gb|ADB62019.1| phage SPO1 DNA polymerase-related protein [Haloterrigena turkmenica DSM 5511] Length = 201 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 72/174 (41%), Gaps = 2/174 (1%) Query: 84 LRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142 + C L + + E DL+ +G P +++ G+PF G++G +LD L++ Sbjct: 12 VTECTRCPKLVDSRSRIVNGVGPEDADLLFVGEGPGANEDEQGEPFVGRSGTVLDDGLRT 71 Query: 143 IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202 + + RT + I+ PP NR+ + E+ CR + +IE + P +++ +G Sbjct: 72 VGLDRTDVRITNCVRCRPPENRDPTKDELANCRSYLETEIERLDPDVIVTLGKVPSEHLL 131 Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 + + G + L VHP + ++ +AL + Sbjct: 132 -ERSVAVTKEAGSLEEVRINGMPQRVLLCVHPAATLYDRSQEETFENALERAAE 184 >gi|220930591|ref|YP_002507500.1| uracil-DNA glycosylase [Clostridium cellulolyticum H10] gi|220000919|gb|ACL77520.1| Uracil-DNA glycosylase superfamily [Clostridium cellulolyticum H10] Length = 196 Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 26/181 (14%), Positives = 57/181 (31%), Gaps = 5/181 (2%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 ++ + C L I + ++ P ++ G F T L Sbjct: 13 EKVPEKAVNCQKCELHCQRSRIIWGEGNPKAPITVLLDNPGAREDKCGVEFICGTRETLQ 72 Query: 138 KMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197 + + + ++++ + P + C ++ QI+ P ++ +GN Sbjct: 73 RAVFEAGLKMEDLYVTYVLKCRPVRRYDKEKA-RATCMEYLIEQIDRQKPMLVFCLGNIA 131 Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKA 257 +FF + G W ++ T AT HP + + P + L + Sbjct: 132 AQWFFGEKDTEVKNIRGFWHSV----RGYTTSATYHPLAVRRRPNLYPTFVKDWKMLAER 187 Query: 258 L 258 Sbjct: 188 Y 188 >gi|319791575|ref|YP_004153215.1| uraciL-DNA glycosylase superfamily [Variovorax paradoxus EPS] gi|315594038|gb|ADU35104.1| Uracil-DNA glycosylase superfamily [Variovorax paradoxus EPS] Length = 481 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 39/223 (17%), Positives = 81/223 (36%), Gaps = 15/223 (6%) Query: 40 QRKEKSIDSAIQPITNIRHIHSP-LVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLS 98 + +S P T R I +P + + L EL++ + C + + + Sbjct: 247 AAEARSQSMIDAPPTAARRIRAPIALHVRPAEGVAPADLGELRAAAHACRACPIGALATQ 306 Query: 99 TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158 +C M++G P D +++ G+PF G G +LD+ + + R ++++ Sbjct: 307 AVCGEGPLAPQHMLVGEQPGDQEDLMGRPFVGPAGQLLDRAMAQLGWARDSVYLANAVKH 366 Query: 159 HPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQ 211 ++ + E + C + +I L+ P+ L+ +G + Sbjct: 367 FKYELRGKRRIHKTAAQREADACAHWLDSEISLVRPEGLVALGATAARALLGRPVAVQAE 426 Query: 212 NLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT----WHA 250 G W L P T+HP L++ ++ W Sbjct: 427 -RGAW--LHERSDGRPVFVTLHPSALLRLADGERVAAYARWLD 466 >gi|289642239|ref|ZP_06474389.1| phage SPO1 DNA polymerase-related protein [Frankia symbiont of Datisca glomerata] gi|289507973|gb|EFD28922.1| phage SPO1 DNA polymerase-related protein [Frankia symbiont of Datisca glomerata] Length = 230 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 72/190 (37%), Gaps = 16/190 (8%) Query: 86 SFHDCHLCSTS-LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIE 144 S C L T+ L+++G P D ++ G+PF G G +LD+ L Sbjct: 41 SCRGCELADLPDTRTVFGEGNPRARLVLVGEQPGDVEDRRGRPFVGPAGKLLDRALADAG 100 Query: 145 IMRTQIHISMISPWHPPG--------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 I R + +++ ++ ++ CRP + ++ I P++++ +G Sbjct: 101 IDRAEAYVTNAVKHFRYRRNGGPRRIHQTPDARQVTACRPWLAAELNRIRPRLVVLLGAT 160 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ-YPLIKKNTWH----AL 251 + + G+ P S +AT+HP +++ P + + L Sbjct: 161 AGQALLGPSFRV-TKMRGRLLPGP-PGSDAQLIATLHPSAVLRVEPTTRDEVYAGFVHDL 218 Query: 252 ITLKKALKNL 261 ++ L + Sbjct: 219 ELAERTLAGM 228 >gi|303242372|ref|ZP_07328856.1| Uracil-DNA glycosylase superfamily [Acetivibrio cellulolyticus CD2] gi|302590050|gb|EFL59814.1| Uracil-DNA glycosylase superfamily [Acetivibrio cellulolyticus CD2] Length = 191 Score = 112 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 63/181 (34%), Gaps = 5/181 (2%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 +L + C L + D+++I P ++ +G T L Sbjct: 13 DQLPECAKGCTRCELYKQRTRIVWGEGNPKADIVVILDNPGCREDKNGNELICGTRQTLQ 72 Query: 138 KMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197 S+ + ++I+ I P N N E C + +Q++ + KI +G+ Sbjct: 73 FAANSVGLNEKDLYITYILKCRPVRKYNKENA-RETCLGYLYQQLQTNNFKIAFCLGDVA 131 Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKA 257 FF++ + G W + IPT + HP + + P + + + K Sbjct: 132 VKAFFSDPERDVKSTRGMWHYV----RNIPTYVSYHPLAIRRRPNLYGIFINDWEQVNKF 187 Query: 258 L 258 Sbjct: 188 Y 188 >gi|187920666|ref|YP_001889698.1| uracil-DNA glycosylase superfamily [Burkholderia phytofirmans PsJN] gi|187719104|gb|ACD20327.1| Uracil-DNA glycosylase superfamily [Burkholderia phytofirmans PsJN] Length = 546 Score = 112 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 32/217 (14%), Positives = 74/217 (34%), Gaps = 14/217 (6%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACS--LHELKSLLRSFH 88 P A + + + + + A + L E L + Sbjct: 305 PLRYWKTPPAGPPLPARLARERSRLGAQSGTVTIPETPPLEYSAVTPPLREPTGPLPTCR 364 Query: 89 DCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRT 148 C L + + LM++G P + +N G PF+G G +LD +L + R+ Sbjct: 365 RCALWRNAKQAVAGAGPARAALMVVGEQPGEHENQHGVPFTGPAGQLLDTVLVRAGLERS 424 Query: 149 QIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 ++++ + +R + E+E C+ + ++ ++P++++ +G Sbjct: 425 ALYLTYAVKHYKWETLEQRRVHRTPARREVEACQYWLDHELAQVAPRVVVTLGATALKAL 484 Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238 + ++ H + T HP + Sbjct: 485 TGAHVNLS-----EYLGQTIDHGGRLIVPTWHPSYAL 516 >gi|89896479|ref|YP_519966.1| hypothetical protein DSY3733 [Desulfitobacterium hafniense Y51] gi|89335927|dbj|BAE85522.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 191 Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 67/181 (37%), Gaps = 5/181 (2%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 +L ++ +C +C+ I ++II P ++ G + T L Sbjct: 13 DKLPKEAVAYRECEVCTEKARIIWGEGNPKAPVVIILDNPGAREDKDGHEYVCGTRQTLQ 72 Query: 138 KMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197 L ++ I+I+ + P R + +++QI+ I P++L+ +G+ Sbjct: 73 TALHQADLTPDDIYITYLLKCRPL-RRYNKEEARAFSKSFLIQQIKTIQPQLLVCLGDTV 131 Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKA 257 F++ G W + P + + HP + + P + + L++ Sbjct: 132 VQAMFDDQEAHVKNLRGSWHVI----LGYPCIVSYHPLAVRRRPNLARQFREDWDMLRQR 187 Query: 258 L 258 L Sbjct: 188 L 188 >gi|218681720|ref|ZP_03529521.1| phage SPO1 DNA polymerase-related protein [Rhizobium etli CIAT 894] Length = 410 Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 73/167 (43%), Gaps = 7/167 (4%) Query: 35 ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94 A+ ES+ + + A P+ + A +L L + C L Sbjct: 232 ASAESKVRAMAAREATHPLALHDRLQQAARNHPADAEALAGTLEALSAEAAVCTRCPLHE 291 Query: 95 TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154 + T+ ++M +G P D ++I+G+PF G G +LD+++ I R++++++ Sbjct: 292 KATQTVFGEGPRDAEVMFVGEQPGDQEDIAGRPFVGPAGRLLDQVIAEAGIDRSRLYVTN 351 Query: 155 ISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 ++ + E++ CR + ++EL+ PK+++ +G Sbjct: 352 AVKHFKYEPRGKRRIHQKPNMGEVKHCRWWLDLEMELVKPKLIVAMG 398 >gi|323525788|ref|YP_004227941.1| phage SPO1 DNA polymerase-like protein [Burkholderia sp. CCGE1001] gi|323382790|gb|ADX54881.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp. CCGE1001] Length = 490 Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 79/217 (36%), Gaps = 15/217 (6%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P + ++ + + + + + AQ A + S L + C Sbjct: 247 PEGRLIPAMLSEARTGARRVAQASGVTALGGKAIPVEAESAQPARAQP---SSLNACRRC 303 Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150 L + + +M+IG P D +++SG+PF G G +L+ + + R ++ Sbjct: 304 VLWRHATQAVGGAGPRPAPIMLIGEQPGDQEDLSGEPFVGPAGQLLNSAIARAGLTRDEL 363 Query: 151 HISMIS---PWHPPGNRNLS----NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 +++ W P G R L E+E C + + + P +++ +G + Sbjct: 364 YLTNAVKHFKWEPRGKRRLHKTPAQREVEACSHWLAHEFATVRPSVVVVLGATALHALL- 422 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 ++ L + L +AT HP ++ Sbjct: 423 RESASLSDYLSEPFELEGGWG----IATYHPSFALRQ 455 >gi|310644810|ref|YP_003949569.1| uracil-DNA glycosylase superfamily [Paenibacillus polymyxa SC2] gi|309249761|gb|ADO59328.1| Uracil-DNA glycosylase superfamily [Paenibacillus polymyxa SC2] Length = 197 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 54/179 (30%), Gaps = 6/179 (3%) Query: 84 LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143 + C L I LM+I P ++ G F T L ++ Sbjct: 17 IEHCEICELSKQRNRVIWGEGNPKAPLMMILDNPGAREDREGNSFLCGTRETLQYGMREA 76 Query: 144 EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 I ++++ + P C P + Q+ P +L GN F Sbjct: 77 GIDVNDVYVTYLLKCRP-MRAYNKPEARAACLPHLQIQLFQKQPLVLFGFGNVVAGAIFT 135 Query: 204 ND-AQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 N + G W L P T HP + + + + L LK+ K + Sbjct: 136 NKEGASVKELRGSWYELQ----GTPISFTYHPLAVRRRANLLRFFVEDLKALKEKWKEI 190 >gi|148655030|ref|YP_001275235.1| phage SPO1 DNA polymerase-like protein [Roseiflexus sp. RS-1] gi|148567140|gb|ABQ89285.1| phage SPO1 DNA polymerase-related protein [Roseiflexus sp. RS-1] Length = 186 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 65/163 (39%), Gaps = 6/163 (3%) Query: 98 STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP 157 + +M IG P +++ G+PF G G L+++L + R+ + I+ + Sbjct: 2 RAVPGEGPPDAKVMFIGEAPGFNEDRQGRPFVGAAGQFLEELLALAGLRRSDVFIANVIK 61 Query: 158 WHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS 217 PPGNR+ E+ C + RQI ++P +++ +G + +F + +W Sbjct: 62 HRPPGNRDPEPDEIAACSQFLERQIAALNPLVIVTLGRFSMARWFPGEKISRIHGQPRWI 121 Query: 218 NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 + + +HP + P + L + + Sbjct: 122 D------GRLIVPMMHPAAALHQPQYRALIEADFRRLPEFIAQ 158 >gi|187924320|ref|YP_001895962.1| phage SPO1 DNA polymerase-related protein [Burkholderia phytofirmans PsJN] gi|187715514|gb|ACD16738.1| phage SPO1 DNA polymerase-related protein [Burkholderia phytofirmans PsJN] Length = 491 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 74/211 (35%), Gaps = 19/211 (9%) Query: 37 YESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTS 96 E++ + + A A ++ SL + C L + Sbjct: 257 SEAKSGARRVAQASGVGALGGKTIPVEADMAQPAREQPSSLD-------TCRRCDLWRNA 309 Query: 97 LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156 + ++ +M+IG P D +++SG+PF G G +L+ + + R Q++++ Sbjct: 310 TQAVGSSGPSDARIMLIGEQPGDQEDLSGQPFVGPAGQLLETAITRAGLSREQVYLTNAV 369 Query: 157 ---PWHPPGNRNLS----NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209 W P G R L E+E C + R++ + P +++ +G Sbjct: 370 KHFKWEPRGKRRLHKTPGQREIEACSYWLERELHTVRPVVIVTLGATALTALLREKVSLR 429 Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 + +AT HP ++ Sbjct: 430 DHL-----DAPFRVEGGWGIATYHPSFALRQ 455 >gi|322435429|ref|YP_004217641.1| phage SPO1 DNA polymerase-related protein [Acidobacterium sp. MP5ACTX9] gi|321163156|gb|ADW68861.1| phage SPO1 DNA polymerase-related protein [Acidobacterium sp. MP5ACTX9] Length = 521 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 72/171 (42%), Gaps = 11/171 (6%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 ++ + L + C L + + LM++G P D +++ G+PF G G + Sbjct: 327 TIRAIAEALPTCKGCELYCHATQVVPGRGPATAALMLVGEQPGDQEDLQGEPFIGPAGAV 386 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPK 188 LD +L+ + I R +++++ +++ E+ CRP ++ +I+ I PK Sbjct: 387 LDHILEDLRIPRKEVYVTNAVKHFKFVQRGKLRLHQSPRMSEIMACRPWLLAEIDAIKPK 446 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 ++L +G GK ++ AT+HP +++ Sbjct: 447 VVLCLGASASKSLLGGTFALMKD-HGKLNSTPFAD---KVFATIHPSAVLR 493 >gi|329924361|ref|ZP_08279478.1| uracil-DNA glycosylase, family 4 [Paenibacillus sp. HGF5] gi|328940712|gb|EGG37029.1| uracil-DNA glycosylase, family 4 [Paenibacillus sp. HGF5] Length = 199 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 56/180 (31%), Gaps = 6/180 (3%) Query: 82 SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 ++ C LC I LM+I P ++ G PF T L ++ Sbjct: 19 EDMQHCERCELCRQRNRVIWGEGNPQGSLMMILDNPGAREDREGNPFLCGTRETLQLGMK 78 Query: 142 SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 I ++++ + P C P + Q+ P +L GN Sbjct: 79 EAGIDIHSVYVTYLLK-RRPTRAYDKPATRAACLPHLQSQLLQKQPLVLFGFGNVVVEGL 137 Query: 202 F-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 F + + G W IP T HP + + P + + L L+ + Sbjct: 138 FPQKENATVKELRGSWHEFE----GIPIGFTYHPLAVRRRPNLLRFFIEDLKGLRTKWEE 193 >gi|103486672|ref|YP_616233.1| uracil-DNA glycosylase superfamily protein [Sphingopyxis alaskensis RB2256] gi|98976749|gb|ABF52900.1| Uracil-DNA glycosylase superfamily [Sphingopyxis alaskensis RB2256] Length = 262 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 50/260 (19%), Positives = 96/260 (36%), Gaps = 32/260 (12%) Query: 14 TIALFYADSGVY---------WVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLV 64 + +++ +GV W+ P N+A R+ + + QP+ + Sbjct: 12 SYCDWWSLAGVDALVGEQPAGWLAMSPANDAAASRPRRTATAAAEPQPLPDALQ------ 65 Query: 65 QQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYT-------- 116 +++ +L + D H S + +Q + + ++ +G Sbjct: 66 ---RQSSERPVESRGPTALPADWKDFHQWLGSSEAVPGSQWDARRVLPVGEAAAPLMLLT 122 Query: 117 --PSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC 174 P D G+ F+G G +LD MLQ+I ++R Q +++ ++ PPG + + Sbjct: 123 AWPEIDDQREGQLFAGPAGKLLDAMLQAIGLVRRQCYVASLAVTRPPGG-RIDAHDAAEL 181 Query: 175 RPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHP 234 ++ + L P+ LL IG GK +L + T+A HP Sbjct: 182 DRLLWHHLRLAMPQRLLLIGGDIVRIAAGLTL---SDARGKLLDLNQDGGKMETVAVAHP 238 Query: 235 QELIQYPLIKKNTWHALITL 254 L+ P K W +L Sbjct: 239 AMLLARPAQKAAAWDSLKLF 258 >gi|219667667|ref|YP_002458102.1| uracil-DNA glycosylase [Desulfitobacterium hafniense DCB-2] gi|219537927|gb|ACL19666.1| Uracil-DNA glycosylase superfamily [Desulfitobacterium hafniense DCB-2] Length = 191 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 68/181 (37%), Gaps = 5/181 (2%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 +L ++ +C +C+ I ++II P ++ G + T L Sbjct: 13 DKLPKEAVAYRECEVCTEKARIIWGEGNPKAPVVIILDNPGAREDKDGHEYVCGTRQTLQ 72 Query: 138 KMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197 L ++ I+I+ + P R +P +++QI+ I P++L+ +G+ Sbjct: 73 TALHQADLAPDDIYITYLLKCRPL-RRYNKEEARTFSKPFLIQQIKTIQPQLLVCLGDTV 131 Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKA 257 F++ G W + P + + HP + + P + + L++ Sbjct: 132 VQAMFDDQEAHVKNLRGSWHVI----LGYPCIVSYHPLAVRRRPNLARQFREDWDMLRQR 187 Query: 258 L 258 L Sbjct: 188 L 188 >gi|303242849|ref|ZP_07329313.1| Uracil-DNA glycosylase superfamily [Acetivibrio cellulolyticus CD2] gi|302589595|gb|EFL59379.1| Uracil-DNA glycosylase superfamily [Acetivibrio cellulolyticus CD2] Length = 193 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 63/172 (36%), Gaps = 9/172 (5%) Query: 97 LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156 + L++IG P + + KPF G G L + L+ + + R +I+I+ Sbjct: 21 QEIVTGDGNPNSSLLLIGEAPGKDEVANSKPFVGMAGKNLAQFLEVLGLKRDEIYITNAI 80 Query: 157 PWHPPG---------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207 NR + E+E R ++ +I++I PK ++ +GN + Sbjct: 81 KHRLSKVNPSTGRLSNRPATKEEIEQNREYLIEEIDIIGPKYIITLGNVPLRSVLGDHKA 140 Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 G + HP +I IKK + L++ +K Sbjct: 141 SIGDVHGALDKVSVKGREYGLYPLYHPASIIYNASIKKIYTKDIENLREIIK 192 >gi|84500118|ref|ZP_00998384.1| putative uracil-DNA glycosylase [Oceanicola batsensis HTCC2597] gi|84392052|gb|EAQ04320.1| putative uracil-DNA glycosylase [Oceanicola batsensis HTCC2597] Length = 478 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 78/234 (33%), Gaps = 21/234 (8%) Query: 40 QRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHEL-KSLLRSFHDCHLCSTSLS 98 +A P + A + + L + + Sbjct: 252 AEARVREMAARAPTLPPVRAARIAERLAGTGVDRVMDFEALHRRAAEENREVPDGYGR-- 309 Query: 99 TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158 + LMI+G P D+++ +G+PF G +G +LD+ + + R+ +++ Sbjct: 310 IVLGEGPGDAPLMIVGEQPGDAEDRAGRPFVGPSGQLLDREAAAAGLDRSAAYVTNAVKR 369 Query: 159 HPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQ 211 ++ E+E R + +I L+ P+++L +G + + Sbjct: 370 FKFVQRGKRRLHQPPDRTEIEHGRWWLDHEIALVRPRLILAMGGTAAESLTGSRTGL-LK 428 Query: 212 NLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKKN----TWHALITLKKALK 259 G+ P TVHP +++ P KK+ L + + L Sbjct: 429 RRGRIEETDRG----PVFLTVHPSYILRLPDPARKKDETERFREDLAEVARTLA 478 >gi|257075752|ref|ZP_05570113.1| DNA polymerase [Ferroplasma acidarmanus fer1] Length = 321 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 37/165 (22%), Positives = 74/165 (44%), Gaps = 10/165 (6%) Query: 93 CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML-QSIEIMRTQIH 151 S S + + I+G P +++I KPF G++G +L+ ++ + + R ++ Sbjct: 160 WDLSTSFVPGEGNLNAAIFIVGQAPGRNEDIMKKPFVGRSGKLLESLITDELHMDRESLY 219 Query: 152 ISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQ 211 I+ + + PP NR S+ E+ +C P +M+QIE+++P I++ +G + + Sbjct: 220 ITSVVQFFPPENRAPSDDEIALCLPYLMKQIEIVNPAIIVLLGAVAARTLVQVKS--IMK 277 Query: 212 NLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 GK T+HP ++ P + L+K Sbjct: 278 EHGKLFMDKY-------FVTLHPAAALRNPANVEIMRSDFRALEK 315 >gi|167899873|ref|ZP_02487274.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 7894] Length = 185 Score = 109 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 68/167 (40%), Gaps = 13/167 (7%) Query: 92 LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH 151 L + + +M++G P + ++ G PF G G +L++ L + + R ++ Sbjct: 1 LWEHATQAVPGAGPPRAAIMLVGEQPGNQEDREGAPFVGPAGRVLERALAAAGLDRASVY 60 Query: 152 ISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204 ++ ++ + E++ CR + R+++ + P++++ +G ++ Sbjct: 61 VTNAVKHFKWAPRGKRRMHKTPAQQEIDACRYWLERELDALEPRVVVALGAIALKAVLDD 120 Query: 205 DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKKNTWH 249 + +G + +AT HP +++ P +K + Sbjct: 121 RHARLQPAMG----VVQSAGGRYVIATYHPSFVLRVPDPDARKRAYA 163 >gi|255321596|ref|ZP_05362754.1| uracil-DNA glycosylase family protein [Campylobacter showae RM3277] gi|255301452|gb|EET80711.1| uracil-DNA glycosylase family protein [Campylobacter showae RM3277] Length = 209 Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 79/192 (41%), Gaps = 7/192 (3%) Query: 67 ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126 + S+A SL EL + ++ + C LC ++ + + ++ + P+ +++ SG+ Sbjct: 25 SPSLAALPRSLAELNASIKECNLCDLCKSANHALTGLGDKSAKVVFVFDAPNTAEDASGE 84 Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186 +G L + + + + +I+++ + P + E+ C P + L++ Sbjct: 85 FLAGDD-KFLQNLNELAGLKKDEIYVTSLLKCKPAAKVPTNAYEL--CEPYFSAEARLVA 141 Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKN 246 PK+++ +G + AQ G LAT P + + P K+ Sbjct: 142 PKLIVALGEEVFYKMIKQSAQSFETIRGNIMKFKHSA----LLATYSPTVVAKNPSKKEL 197 Query: 247 TWHALITLKKAL 258 + L +K+ L Sbjct: 198 FFSDLKKIKEYL 209 >gi|154174717|ref|YP_001408439.1| uracil-DNA glycosylase superfamily protein [Campylobacter curvus 525.92] gi|112802955|gb|EAU00299.1| putative uracil-DNA glycosylase superfamily [Campylobacter curvus 525.92] Length = 223 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 37/189 (19%), Positives = 74/189 (39%), Gaps = 8/189 (4%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG- 133 L+EL + C L T+ TI + +M + PS S++ G+ G G Sbjct: 38 SDLNELNKQISHCALCTLRKTANRTILGLGDKSSKVMFVSLAPSISEDQEGEHLCGMAGV 97 Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSN---IEMEICRPIIMRQIELISPKIL 190 + + + S+ + + + +IS I + + +E+CRP ++ +I L+ PK++ Sbjct: 98 KLCEMIYNSLGLRKGEFYISSILRCKFLPSETQNAAINECLELCRPYLLEEIRLLKPKVI 157 Query: 191 LFIGNKTKNFFFNNDAQKTYQN-LGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249 + +G F N + +N I + T L++ P + Sbjct: 158 VALGE---QVFLNLYPESLLKNSFESIRGSVLKFGDISVMPTYSHAWLMKNPSFESVFLD 214 Query: 250 ALITLKKAL 258 L +K + Sbjct: 215 DLRKIKGMI 223 >gi|108804621|ref|YP_644558.1| uracil-DNA glycosylase superfamily protein [Rubrobacter xylanophilus DSM 9941] gi|108765864|gb|ABG04746.1| Uracil-DNA glycosylase superfamily [Rubrobacter xylanophilus DSM 9941] Length = 196 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 34/173 (19%), Positives = 69/173 (39%), Gaps = 18/173 (10%) Query: 100 ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH 159 + G L I+G P + G+PF G+ G +LD++L+ I R++++++ + Sbjct: 23 VFGEGEPGARLAIVGEAPGGREVELGRPFVGRAGRLLDELLEEAGIDRSEVYVTNLVKVR 82 Query: 160 PPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN 212 P NR E+ ++ ++ I P L+ +G+ + + + Sbjct: 83 PTKESGGRIQNRPPRAGEVREGLEVLEEELRAIGPGALVLLGSTPAKALID-RSFTMREG 141 Query: 213 LGKWSNLCTPHSIIPTLATVHPQELIQ--------YPLIKKNTWHALITLKKA 257 G+ +P LAT HP L++ Y +++ L T + Sbjct: 142 RGRIFESKI--LGLPALATYHPAYLLRVRGAGGADYGRLRRQVVEDLRTAWER 192 >gi|86738798|ref|YP_479198.1| phage SPO1 DNA polymerase-related protein [Frankia sp. CcI3] gi|86565660|gb|ABD09469.1| phage SPO1 DNA polymerase-related protein [Frankia sp. CcI3] Length = 216 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 65/184 (35%), Gaps = 11/184 (5%) Query: 72 QKACSLHELKSLLRSFHDCHLCS-TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130 L L + C L T+ L ++G P D ++ G PF G Sbjct: 7 PPRADLPTLAAAAADCQGCDLAQLPGTRTVFGVGPAHSWLALVGEQPGDIEDRRGVPFVG 66 Query: 131 KTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEME--------ICRPIIMRQI 182 G +LD+ L + + R +++ + N + CRP + ++ Sbjct: 67 PAGKLLDRALGEVGLDRAEVYTTNAVKHFRYRTGNGPRRIHQTPDLRHVTACRPWLSAEL 126 Query: 183 ELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL 242 L+ P I++ +G + + G+ S LAT+HP +++ Sbjct: 127 NLVRPAIVVILGATAGMSLLGPSFRV-TKMRGRLLPGP-AGSGAQLLATLHPSAVLRADP 184 Query: 243 IKKN 246 +++ Sbjct: 185 ARRD 188 >gi|223039687|ref|ZP_03609973.1| putative uracil-DNA glycosylase superfamily [Campylobacter rectus RM3267] gi|222879070|gb|EEF14165.1| putative uracil-DNA glycosylase superfamily [Campylobacter rectus RM3267] Length = 209 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 78/192 (40%), Gaps = 7/192 (3%) Query: 67 ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126 + S SL EL + ++ + C LC ++ + + ++ + P+ +++ SG+ Sbjct: 25 SPSSVALPSSLAELNASIKECNLCELCKSANHALAGLGDKSAKVIFVFDAPNAAEDASGE 84 Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186 +G L + + + + +I+++ + P S E +C P ++ LI+ Sbjct: 85 FLAGDD-KFLQNLNEMAGLKKDEIYVTSLLKCKPAAKAPASAYE--LCEPYFSAEVRLIA 141 Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKN 246 PK+++ +G + AQ G LAT P + + P K+ Sbjct: 142 PKLIVALGEEVFYKMIKQSAQSFEAIRGNIMKFKHSA----LLATYSPTVIAKNPSKKEL 197 Query: 247 TWHALITLKKAL 258 + L +K+ L Sbjct: 198 FFSDLKKIKEYL 209 >gi|125975587|ref|YP_001039497.1| uracil-DNA glycosylase superfamily protein [Clostridium thermocellum ATCC 27405] gi|256005908|ref|ZP_05430853.1| Uracil-DNA glycosylase superfamily [Clostridium thermocellum DSM 2360] gi|281416599|ref|ZP_06247619.1| Uracil-DNA glycosylase superfamily [Clostridium thermocellum JW20] gi|125715812|gb|ABN54304.1| Uracil-DNA glycosylase superfamily [Clostridium thermocellum ATCC 27405] gi|255990112|gb|EEU00249.1| Uracil-DNA glycosylase superfamily [Clostridium thermocellum DSM 2360] gi|281408001|gb|EFB38259.1| Uracil-DNA glycosylase superfamily [Clostridium thermocellum JW20] gi|316939706|gb|ADU73740.1| Uracil-DNA glycosylase superfamily [Clostridium thermocellum DSM 1313] Length = 192 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 65/168 (38%), Gaps = 9/168 (5%) Query: 97 LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156 + L++IG P + + KPF G G L + L + + R I+I+ Sbjct: 21 REIVLGDGNVNSRLVLIGEAPGKDEVLKSKPFVGAAGKNLAEFLDVLGLKREDIYITNAI 80 Query: 157 PWHPPG---------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207 + NR + E+ R ++++IE+I+P+ ++ +GN + + + Sbjct: 81 KYRLSKVKPETNRVSNRPATKNEILENRSYLLKEIEIINPEYIVTLGNVPLRSVYGDFSI 140 Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 + G + + + HP +I +K+ L L+ Sbjct: 141 SIGEVHGTLTRVEVLGTEFNLFPLYHPASIIYNVKLKEIYNEDLNKLR 188 >gi|332290148|ref|YP_004421000.1| Uracil DNA glycosylase superfamily [Gallibacterium anatis UMN179] gi|330433044|gb|AEC18103.1| Uracil DNA glycosylase superfamily [Gallibacterium anatis UMN179] Length = 179 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 35/164 (21%), Positives = 62/164 (37%), Gaps = 4/164 (2%) Query: 98 STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP 157 + A ++M IG P + I G PF+G +G D++L SI + R I+++ + Sbjct: 19 QLVPAWGNPHAEIMFIGDAPGKDELIKG-PFAGTSGKFFDQLLASIGLRRENIYLTNVVK 77 Query: 158 WHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS 217 + E+ ++ +I I PKI++ G + F K + G+ Sbjct: 78 FRAEKRDPNKK-EIMAFNGLLRAEIAKIKPKIIVPCGRIALSVFL--PEFKISEIHGQVY 134 Query: 218 NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 L L HP + ++ +TL NL Sbjct: 135 TLMQEQHCFQLLPMYHPAAAMHNGKMRPMLKQDFLTLGDVWNNL 178 >gi|118474440|ref|YP_891737.1| uracil-DNA glycosylase superfamily protein [Campylobacter fetus subsp. fetus 82-40] gi|118413666|gb|ABK82086.1| uracil-DNA glycosylase superfamily, putative [Campylobacter fetus subsp. fetus 82-40] Length = 213 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 26/184 (14%), Positives = 67/184 (36%), Gaps = 7/184 (3%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 +L L+ +++ + C LC + + + ++M++ PS ++ +G + Sbjct: 37 SNLKRLEEQIKNCNLCELCKSRNKAVLGGKEASSNVMLVENFPSFDEDKNGSA---AFND 93 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 L + L +I +++ + + P + L + + C ++ +++ PK+++ G Sbjct: 94 ELKECLNLAQIDIQKLYFTHMLKCRPKDDMILKDTWYDQCYSYFEQEFDIVKPKLIISFG 153 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 + G + T +I+ P K+ L + Sbjct: 154 KDVFFRITKDRNCAFESVRGGIFKFKNS----LIMPTYSAFWIIKNPSHKQKFIDDLKKI 209 Query: 255 KKAL 258 K L Sbjct: 210 KGYL 213 >gi|58578289|emb|CAI48083.1| hypothetical protein [uncultured bacterium] Length = 208 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 34/134 (25%), Positives = 62/134 (46%) Query: 57 RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYT 116 + SP + + + H L + C L T + + + ++ +G Sbjct: 41 KRPPSPARKNKPDGRDRGEAFHALSLEAANCCQCPLAQTRKNVVFGAGSLSAQVVFVGEA 100 Query: 117 PSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP 176 P ++ G PF GK G +L ++ ++ + R +++I I PPGNR E+ +C P Sbjct: 101 PGADEDEQGLPFVGKAGQLLTNIITAMGLTRKEVYICNILKCRPPGNRTPLPEEIRLCEP 160 Query: 177 IIMRQIELISPKIL 190 + RQ+ LI+P+IL Sbjct: 161 FLKRQLSLIAPQIL 174 >gi|48477991|ref|YP_023697.1| DNA polymerase [Picrophilus torridus DSM 9790] gi|48430639|gb|AAT43504.1| DNA polymerase, bacteriophage-type [Picrophilus torridus DSM 9790] Length = 326 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 75/169 (44%), Gaps = 7/169 (4%) Query: 93 CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHI 152 S S + + +++ IG +P +++ + +PF+G+ G L+ +L+ + R ++++ Sbjct: 161 WSMSRNYVPGEGNLNSEVIFIGQSPGFNEDETRRPFTGRAGLFLNSLLKMAGLERNRVYL 220 Query: 153 SMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN 212 + + + NR + E+E P ++R+I++I PK+++ +G+ N F Sbjct: 221 TNVLKFMTYKNRPPNKHEIENAMPYLLREIDIIRPKLIVLMGSTAVNAFL--PKHSVTLY 278 Query: 213 LGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 GK + + T+HP + L +K++ Sbjct: 279 HGKLI-----NDRMKFYITLHPASALHVLQNMPLIEEDFRNLGIIIKDM 322 >gi|205372507|ref|ZP_03225320.1| uracil-DNA glycosylase family protein [Bacillus coahuilensis m4-4] Length = 211 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 40/189 (21%), Positives = 74/189 (39%), Gaps = 27/189 (14%) Query: 99 TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158 + + + +MI+G P +++ I G PF G++G +LD ML+ I + R ++I+ Sbjct: 22 FVAYGGSFKEHIMIVGEAPGENEAIQGLPFIGRSGKVLDAMLEEIGVDRQDVYITSAVKS 81 Query: 159 HPPG---------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 P NR + E+ P++ +++ I P++++ +G N Sbjct: 82 RPFQWKEKKLQRAWVCKKYNRPPTIEEVLAHAPVLDYELDRIQPRLIITLGRVGWNRVSG 141 Query: 204 NDAQKTYQNLGKWS-----------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 + A + GK L HP L+ P +K+ L Sbjct: 142 STA-MMSKIHGKLHTGPILRMNGNEELEYSQKSYRVFPLYHPASLLYKPSLKEEMKKDLT 200 Query: 253 TLKKALKNL 261 TLK L + Sbjct: 201 TLKALLLEM 209 >gi|296532159|ref|ZP_06894920.1| family 4 uracil-DNA glycosylase [Roseomonas cervicalis ATCC 49957] gi|296267518|gb|EFH13382.1| family 4 uracil-DNA glycosylase [Roseomonas cervicalis ATCC 49957] Length = 189 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 69/157 (43%), Gaps = 11/157 (7%) Query: 93 CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHI 152 + +T+ LM++G P D+++ G+PF G G +LD+ L + + R ++ Sbjct: 12 WAAGHTTVLGEGPPQAPLMLVGEQPGDAEDRQGRPFVGPAGRLLDRALLAAGLDRAACYL 71 Query: 153 SMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 + ++ + ++ + RP ++R+++ ++P++++ +G Sbjct: 72 TNAVKHFKFTQRGARRIHQKPDSGDIALYRPFLLREVDAVAPRLIVALGATAAQGLLGRK 131 Query: 206 AQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL 242 + G++ + P L TVHP L++ P Sbjct: 132 -IGVLKLRGQFL---SGPDDRPMLLTVHPSFLLRLPD 164 >gi|325523775|gb|EGD02024.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp. TJI49] Length = 164 Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats. Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 1/117 (0%) Query: 53 ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMI 112 +P +A L + + C LC +T+ D M+ Sbjct: 48 AAPPGDPVAPAESRAAETPVAMLDWDALAARVADCTRCRLCEKRTNTVFGVGDREADWML 107 Query: 113 IGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSN 168 +G P ++++ G+PF G+ G +LD ML+S+ + R ++I+ + PPGNRN Sbjct: 108 VGEAPGENEDKQGEPFVGQAGKLLDNMLRSLSLERGRNVYIANVIKCRPPGNRNPEP 164 >gi|296444847|ref|ZP_06886809.1| Uracil-DNA glycosylase superfamily [Methylosinus trichosporium OB3b] gi|296257515|gb|EFH04580.1| Uracil-DNA glycosylase superfamily [Methylosinus trichosporium OB3b] Length = 175 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 3/176 (1%) Query: 84 LRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142 L +F C L + + + A G LM++ + P + D SG+ F G +LDKML++ Sbjct: 1 LAAFDGCAQLKAAAAHFLYAAGAPGAPLMVLDFAPGEEDERSGEAFVGAEARLLDKMLKA 60 Query: 143 IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202 I R +++ +PW PPG R L+ E+ +P + R +EL +PKILL +G+ Sbjct: 61 IGQKRESAYLAYATPWRPPGARELNAGEVTALQPFLRRHVELAAPKILLILGDYAARAAL 120 Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 + G+W + S L L++ P +K+ W L L AL Sbjct: 121 GAT--DVAKLRGQWFDYDAGASRPRALLASSLDNLLKTPALKRRAWRDLRALAAAL 174 >gi|259418076|ref|ZP_05741995.1| uracil-DNA glycosylase [Silicibacter sp. TrichCH4B] gi|259346982|gb|EEW58796.1| uracil-DNA glycosylase [Silicibacter sp. TrichCH4B] Length = 134 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 36/115 (31%), Positives = 63/115 (54%), Gaps = 1/115 (0%) Query: 56 IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115 ++ V +A +A+ A +L L++ L +F C L + + + + G +MIIG Sbjct: 1 MKPKSVDPVAEAVKLAKSADALPGLRAALETFEHCDLKRGARNLVFSDGQAGARVMIIGE 60 Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNI 169 P +++ GKPF G+ G +LDKML +I++ R + +I+ + PW PP NR+ Sbjct: 61 APGRDEDLQGKPFVGRAGQLLDKMLAAIDLSRDENVYITNVLPWRPPQNRDPLPA 115 >gi|84687727|ref|ZP_01015599.1| putative uracil-DNA glycosylase [Maritimibacter alkaliphilus HTCC2654] gi|84664228|gb|EAQ10720.1| putative uracil-DNA glycosylase [Rhodobacterales bacterium HTCC2654] Length = 426 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 67/191 (35%), Gaps = 9/191 (4%) Query: 32 NNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCH 91 + +Q + + + A + R A A + L + C Sbjct: 238 IPDLIATAQTRAREMAEAAPTLAPARAEKVVARVAQAQEALTASQ-DRFHAALDACTRCP 296 Query: 92 LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH 151 L + + + LM +G P D +++ G+PF G G + D+ L S I R + Sbjct: 297 LHTNATQAVPGEGPADAPLMFVGEQPGDREDLEGRPFVGPAGQLFDRALASAGIARDTAY 356 Query: 152 ISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204 ++ ++ + E++ CR + + E +SP +++ +G + Sbjct: 357 VTNAVKHFKFTPRGKRRLHQAPNRDEIDHCRWWLDFERERVSPDLVVALGATALESLTGS 416 Query: 205 DAQKTYQNLGK 215 + G+ Sbjct: 417 RKDL-LKRRGR 426 >gi|34557601|ref|NP_907416.1| hypothetical protein WS1236 [Wolinella succinogenes DSM 1740] gi|34483318|emb|CAE10316.1| hypothetical protein WS1236 [Wolinella succinogenes] Length = 250 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 36/251 (14%), Positives = 94/251 (37%), Gaps = 13/251 (5%) Query: 10 EQILTIALFY-ADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQAD 68 + + ++ FY + ++ ++ + ++ S I+P T+ + A+ Sbjct: 11 QDLFSLIDFYPFFAKIFAMYRLEKMLQLKKLYQERASGRCYIEPFTHASPLG------AE 64 Query: 69 SIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128 ++ L L+ ++ S C L I ++ + TP F Sbjct: 65 GVSHLPEGLLSLQGIIESCVLCELSKGEGKPIFGMCQTTSKVVFVSETPLVDPKH-PSMF 123 Query: 129 SGKTGNMLDKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP 187 G++G ML +++++ + ++ + + HP + + + C+P I++QI+L+ Sbjct: 124 VGRSGEMLRNIVRNVLGLKEGEVSLLSLLKCHPSLAQKVDSALFSSCKPYILKQIDLLPL 183 Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247 ++ + + ++ Q G+ + + + L++ P KK Sbjct: 184 SAIIVPLGEVAYRYLTDERGDFSQYRGQ----KSVWAGRTLIPAHSLSYLLRNPTAKKEA 239 Query: 248 WHALITLKKAL 258 + +K L Sbjct: 240 LKDFLLIKSCL 250 >gi|149200263|ref|ZP_01877284.1| phage SPO1 DNA polymerase-related protein [Lentisphaera araneosa HTCC2155] gi|149136627|gb|EDM25059.1| phage SPO1 DNA polymerase-related protein [Lentisphaera araneosa HTCC2155] Length = 289 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 50/289 (17%), Positives = 95/289 (32%), Gaps = 59/289 (20%) Query: 6 ILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQ 65 LS EQ+ F A+ PN E + + + + ++ TN++ P V Sbjct: 23 DLSHEQLNDFFYFQAE----VPLTFPNCEKLSDEELPCEEATAEVKAKTNVKTHSVPPVL 78 Query: 66 QADSIAQKACS-------------------------------LHELKSLLRSFHDCHLCS 94 Q + L +L+S S C L Sbjct: 79 QEKLELKAPNEVPIRKLGINKEAEETQVEVAIEEKIDLSSLPLDDLRSKALSCKKCLLSF 138 Query: 95 TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154 A +M + ++ PF+G TG+ K+L ++++ ++I+ Sbjct: 139 ND----PAETN-QAKVMFVLDASLIKGDLQD-PFAGPTGDFFKKILSAMKLDMKDVYIAN 192 Query: 155 ISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLG 214 I + E++ I++Q++LI P+ + ++ + Q G Sbjct: 193 IHRC-------PRSSELKEQSAAILQQMKLIKPQACVVCSPSIIRAI--SEYESINQCRG 243 Query: 215 KWSNLCTPHSIIPTLATVHPQELIQYPL-----IKKNTWHALITLKKAL 258 KW N + + + P L++ KK W L + K L Sbjct: 244 KWINW----DGVKIMPSYSPAFLMRSENVYGKVKKKEAWSDLQLVMKEL 288 >gi|168188017|ref|ZP_02622652.1| uracil DNA glycosylase superfamily protein [Clostridium botulinum C str. Eklund] gi|169294138|gb|EDS76271.1| uracil DNA glycosylase superfamily protein [Clostridium botulinum C str. Eklund] Length = 222 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 64/174 (36%), Gaps = 18/174 (10%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 D++ +G P ++ GKPF G G L+SI + R+ I I+ + P Sbjct: 53 GDGPIPSDILFVGEAPGKNEVEQGKPFVGMAGETFSNYLKSIGLNRSNIRITNTCFFRPI 112 Query: 162 G------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209 NR E+ + R ++ +I L++PKI++ +GN + + Sbjct: 113 KRKTGKTGRVTVSNRPPKVSEVNLFREVLDDEINLVNPKIIITLGNVPLKRL--TEFKSI 170 Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIKKNTWHALITLKKALKNL 261 G HP L + K + + LK+ALK L Sbjct: 171 GDCHGNL--YYNESLKRHVFPMYHPSALTYNRNVEFKSMYENDWLKLKEALKTL 222 >gi|300853328|ref|YP_003778312.1| putative uracil DNA glycosylase [Clostridium ljungdahlii DSM 13528] gi|300433443|gb|ADK13210.1| predicted Uracil DNA glycosylase [Clostridium ljungdahlii DSM 13528] Length = 198 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 41/176 (23%), Positives = 63/176 (35%), Gaps = 18/176 (10%) Query: 100 ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH 159 I +++ IG P ++ GKPF G G L SI + R I I+ Sbjct: 27 IFGDGPIPCNILFIGEAPGKTEVEQGKPFVGMAGKTFGSYLNSIGLQRDNIRITNTCFLR 86 Query: 160 PPG------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207 P NR E+E+ + I+ R+IEL++PKI++ +GN F Sbjct: 87 PIKINQGKNGRKTISNRPPKTSEIELFKDILNREIELVNPKIIVTLGNTPLKRF--TKFN 144 Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIKKNTWHALITLKKALKNL 261 + GK HP L + K + LK L ++ Sbjct: 145 SIGECHGKI--YFNEDLKKDIFPMYHPSALTYNRNDSFKLMYENDWKKLKNTLNSI 198 >gi|289523988|ref|ZP_06440842.1| uracil-DNA glycosylase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289502644|gb|EFD23808.1| uracil-DNA glycosylase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 196 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 57/161 (35%), Gaps = 3/161 (1%) Query: 80 LKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKM 139 L+S + S C L I G + ++G P D++ ++G+PF G TG L Sbjct: 4 LESQIMSCERCDLALKRKRAIPGEGPLGARVFLLGQAPFDAEEMNGRPFWGVTGAFLRYF 63 Query: 140 LQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199 L + + + + P +++ C P + +IE + PK+++ +G Sbjct: 64 LGRAGVNFYECWRTNLLKCPLPRYGRPKWRQIDACLPYLKEEIECVRPKVIVPLGKWALK 123 Query: 200 ---FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237 F + ++ HP L Sbjct: 124 GLFALFGLPRPEKNSSIPSLFGKPLGVGEYVLFPLPHPASL 164 >gi|322804313|emb|CBZ01863.1| uracil-DNA glycosylase family protein,clostridial type [Clostridium botulinum H04402 065] Length = 198 Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 74/198 (37%), Gaps = 18/198 (9%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 LK+ +++ + ++ + I D++ IG P ++ GKPF G G + Sbjct: 5 ESLKNKIKNISEEYVGDKTGGYITGDGPIPCDILFIGEAPGKNEVEEGKPFVGMAGKNFE 64 Query: 138 KMLQSIEIMRTQIHISMISPWHPPG------------NRNLSNIEMEICRPIIMRQIELI 185 K L SI + R I I+ + P NR E+ + I+ +I L+ Sbjct: 65 KYLNSIGLKREFIRITNTCFFRPIKIKEGKNGRISISNRPPKVSEISLFSSILDEEINLV 124 Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK- 244 +PK+++ +GN + + G + HP L + Sbjct: 125 NPKLIITLGNVPLKRLTSFKS--IGDCHGNI--YFIENLNRYVFPMYHPSALTYNRSEEF 180 Query: 245 -KNTWHALITLKKALKNL 261 K + + L++AL + Sbjct: 181 HKIYENDWVKLREALDKI 198 >gi|118443398|ref|YP_879247.1| uracil DNA glycosylase [Clostridium novyi NT] gi|118133854|gb|ABK60898.1| Uracil DNA glycosylase superfamily protein [Clostridium novyi NT] Length = 223 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 37/174 (21%), Positives = 62/174 (35%), Gaps = 18/174 (10%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 D++ +G P ++ GKPF G G L+SI + R+ I I+ + P Sbjct: 54 GDGPIPSDILFVGEAPGKNEVEQGKPFVGMAGETFSNYLKSIGLDRSNIRITNTCFFRPI 113 Query: 162 G------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209 NR E+ + R ++ +I L++PKI++ +GN + + Sbjct: 114 KRKTGKTGRVTVSNRPPKVSEVNLFREVLDDEINLVNPKIIITLGNVPLKRL--TEFKSI 171 Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKKNTWHALITLKKALKNL 261 G HP L K + + LK+ LK L Sbjct: 172 GDCHGNL--YYNESLKRYVFPMYHPSALTYNKNDEFKAMYENDWLKLKEVLKTL 223 >gi|168185243|ref|ZP_02619907.1| uracil-DNA glycosylase family protein [Clostridium botulinum Bf] gi|237793355|ref|YP_002860907.1| uracil-DNA glycosylase family protein [Clostridium botulinum Ba4 str. 657] gi|182671710|gb|EDT83671.1| uracil-DNA glycosylase family protein [Clostridium botulinum Bf] gi|229262917|gb|ACQ53950.1| uracil-DNA glycosylase family protein [Clostridium botulinum Ba4 str. 657] Length = 198 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 72/198 (36%), Gaps = 18/198 (9%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 LK+ +R+ + ++ + I D++ IG P ++ GKPF G G + Sbjct: 5 ESLKNKIRNISEEYVGDKTGGYITGDGPIPCDILFIGEAPGKNEVEEGKPFVGMAGKNFE 64 Query: 138 KMLQSIEIMRTQIHISMISPWHPPG------------NRNLSNIEMEICRPIIMRQIELI 185 K L I + R I I+ + P NR E+ + I+ +I L+ Sbjct: 65 KYLNFIGLKRESIRITNTCFFRPIKIKEGKNGRISISNRPPKVSEISLFSSILDEEINLV 124 Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK- 244 +PK+++ +GN + + G + HP L + Sbjct: 125 NPKLIITLGNVPLKTLTSFKS--IGDCHGNI--YFIENLNRYVFPMYHPSALTYNRSEEF 180 Query: 245 -KNTWHALITLKKALKNL 261 K + L++AL + Sbjct: 181 HKIYENDWAKLREALDKI 198 >gi|310830327|ref|YP_003965427.1| Uracil-DNA glycosylase superfamily [Ketogulonicigenium vulgare Y25] gi|308753233|gb|ADO44376.1| Uracil-DNA glycosylase superfamily [Ketogulonicigenium vulgare Y25] Length = 476 Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 77/218 (35%), Gaps = 11/218 (5%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P E + ++ + P ++I + + +L + ++ C Sbjct: 238 PAMLRDAERRVRQMHEAAGSMPDLGAQNISARYRAAMPAAPDLPETLEQAEAAAAQCRRC 297 Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150 +LC + T+ LMI+G P D ++++G PF G G +L + + + Q+ Sbjct: 298 NLCEAATQTVWGRGAPDAALMIVGEQPGDHEDLAGVPFVGPAGQVLHRAMAEARLATDQV 357 Query: 151 HISMISPW-----HPPGNRNLSNI--EMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 ++ + S E+ CR + ++ I P++ + +G Sbjct: 358 WLTNAVKHFKFAPRGKQRMHKSPDGPEIAQCRWWLGLELAFIKPRLTVALGATAAAAL-T 416 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241 D G + T P L HP +++ P Sbjct: 417 GDTSPLAARRG---AIETGLHGGPVLIAWHPSYILRLP 451 >gi|168181181|ref|ZP_02615845.1| uracil-DNA glycosylase family protein [Clostridium botulinum NCTC 2916] gi|226947259|ref|YP_002802350.1| uracil-DNA glycosylase family protein [Clostridium botulinum A2 str. Kyoto] gi|182667981|gb|EDT79960.1| uracil-DNA glycosylase family protein [Clostridium botulinum NCTC 2916] gi|226841767|gb|ACO84433.1| uracil-DNA glycosylase family protein [Clostridium botulinum A2 str. Kyoto] Length = 198 Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 63/174 (36%), Gaps = 18/174 (10%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 D++ IG P ++ GKPF G G +K L SI + R I I+ + P Sbjct: 29 GDGPIPCDILFIGEAPGKNEVEEGKPFVGMAGKNFEKYLNSIGLKREFIRITNTCFFRPI 88 Query: 162 G------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209 NR E+ + I+ +I L++PK+++ +GN + + Sbjct: 89 KIKEGKNGRISISNRPPKVSEISLFSSILDEEINLVNPKLIITLGNVPLKRLTSFKS--I 146 Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK--KNTWHALITLKKALKNL 261 G + HP L + K + + L++AL + Sbjct: 147 GDCHGNI--YFIENLNRYVFPMYHPSALTYNRSEEFHKIYENDWVKLREALDKI 198 >gi|153939172|ref|YP_001389406.1| uracil-DNA glycosylase family protein [Clostridium botulinum F str. Langeland] gi|152935068|gb|ABS40566.1| uracil-DNA glycosylase family protein [Clostridium botulinum F str. Langeland] gi|295317514|gb|ADF97891.1| uracil-DNA glycosylase family protein [Clostridium botulinum F str. 230613] Length = 198 Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 63/174 (36%), Gaps = 18/174 (10%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 D++ IG P ++ GKPF G G +K L SI + R I I+ + P Sbjct: 29 GDGPIPCDILFIGEAPGKNEVEEGKPFVGMAGKNFEKYLNSIGLKREFIRITNTCFFRPI 88 Query: 162 G------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209 NR E+ + I+ +I L++PK+++ +GN + + Sbjct: 89 KIKEGKNGRISISNRPPKVSEISLFSSILDEEINLVNPKLIITLGNVPLKRLTSFKS--I 146 Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK--KNTWHALITLKKALKNL 261 G + HP L + K + + L++AL + Sbjct: 147 GDCHGNI--YFIENLNRYVFPMYHPSALTYNRSEEFHKIYENDWVKLREALDKI 198 >gi|323529497|ref|YP_004231649.1| Uracil-DNA glycosylase superfamily [Burkholderia sp. CCGE1001] gi|323386499|gb|ADX58589.1| Uracil-DNA glycosylase superfamily [Burkholderia sp. CCGE1001] Length = 519 Score = 101 bits (252), Expect = 9e-20, Method: Composition-based stats. Identities = 28/202 (13%), Positives = 64/202 (31%), Gaps = 37/202 (18%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQ-------------------------TEGQD 109 L + L + C L + + Sbjct: 296 PPLRKPAGALDTCRRCALWRNAKRAVPGVGAGMGASCGAGLGFDAGVGVGAGVGVGASAG 355 Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPG 162 +MI+G P + +N G PF+G G +LD +L + R ++++ + Sbjct: 356 IMIVGEQPGEHENEHGVPFTGPAGRLLDSVLARAGLDRASLYLTYAVKHYKWEIVGHERI 415 Query: 163 NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP 222 +R + E+E C+ + +++ ++P++++ +G Sbjct: 416 HRTPAQREVEACQYWLEKELAELAPRVVVALGATALKALTGAHVNLPEYVGRAIH----- 470 Query: 223 HSIIPTLATVHPQELIQYPLIK 244 H + T HP ++ + Sbjct: 471 HGGRIIVPTWHPAFALRTGNAR 492 >gi|187777502|ref|ZP_02993975.1| hypothetical protein CLOSPO_01085 [Clostridium sporogenes ATCC 15579] gi|187774430|gb|EDU38232.1| hypothetical protein CLOSPO_01085 [Clostridium sporogenes ATCC 15579] Length = 198 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 41/195 (21%), Positives = 73/195 (37%), Gaps = 18/195 (9%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 LK+ +++ + ++ + I D++ IG P ++ GKPF G G + Sbjct: 5 ESLKNKIKNISEEYIGDKTGGYITGDGPIPCDILFIGEAPGKNEVEEGKPFVGMAGKNFE 64 Query: 138 KMLQSIEIMRTQIHISMISPWHPPG------------NRNLSNIEMEICRPIIMRQIELI 185 K L SI + R I I+ + P NR E+ + I+ +I L+ Sbjct: 65 KYLNSIGLKRESIRITNTCFFRPIKIKEGKNGRISISNRPPKVSEISLFSSILDEEINLV 124 Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK- 244 +PK+++ +GN N + G + HP L + Sbjct: 125 NPKLIITLGNVPLKRLTNFKS--IGDCHGNV--YFVENLSRYVFPMYHPSSLTYNRSEEF 180 Query: 245 -KNTWHALITLKKAL 258 K + + LK+AL Sbjct: 181 HKIYENDWLKLKEAL 195 >gi|170757429|ref|YP_001779667.1| uracil-DNA glycosylase family protein [Clostridium botulinum B1 str. Okra] gi|169122641|gb|ACA46477.1| uracil-DNA glycosylase family protein [Clostridium botulinum B1 str. Okra] Length = 198 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 62/174 (35%), Gaps = 18/174 (10%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 D++ IG P ++ GKPF G G +K L SI + R I I+ + P Sbjct: 29 GDGPIPCDILFIGEAPGKNEVEEGKPFVGMAGKNFEKYLNSIGLKRELIRITNTCFFRPI 88 Query: 162 G------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209 NR E+ + I+ +I L++PK+++ +GN + + Sbjct: 89 KIKEGKNGRISISNRPPKASEISLFSSILDEEINLVNPKLIITLGNVPLKRLTSFKS--I 146 Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK--KNTWHALITLKKALKNL 261 G + HP L + K + + L++ L + Sbjct: 147 GDCHGNI--YFIENLNRYVFPMYHPSALTYNRSEEFHKIYENDWVKLREDLDKI 198 >gi|15893511|ref|NP_346860.1| uracyl DNA glycosilase [Clostridium acetobutylicum ATCC 824] gi|15023052|gb|AAK78200.1|AE007535_2 Uracyl DNA glycosilase [Clostridium acetobutylicum ATCC 824] gi|325507629|gb|ADZ19265.1| Uracyl DNA glycosilase [Clostridium acetobutylicum EA 2018] Length = 199 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 45/201 (22%), Positives = 74/201 (36%), Gaps = 20/201 (9%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLS-TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 +L LK+ + + + + + I D+M +G P S+ SGKPF G G Sbjct: 2 NNLQFLKNKIETIAN-NYKEEATGGFITGDGPIPCDIMFVGEAPGKSEVESGKPFVGVAG 60 Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPG------------NRNLSNIEMEICRPIIMRQ 181 +K L SI + R+ + I+ + P NR E+ + R I+ + Sbjct: 61 KNFEKYLNSIGVERSNVRITNTCFFRPIKIKTSKNGKTTISNRPPKTSEINLFREILDEE 120 Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241 I ++ PKI++ +GN N A + + + HP L Sbjct: 121 ISIVKPKIIITLGNVPLKRLTNFKAIGECHG----TPVHSDDFSCTIFPMYHPSSLTYNQ 176 Query: 242 --LIKKNTWHALITLKKALKN 260 +K I LK LK Sbjct: 177 NDEFRKMYEEDWIKLKSVLKK 197 >gi|331270667|ref|YP_004397159.1| Uracil DNA glycosylase superfamily protein [Clostridium botulinum BKT015925] gi|329127217|gb|AEB77162.1| Uracil DNA glycosylase superfamily protein [Clostridium botulinum BKT015925] Length = 232 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 37/174 (21%), Positives = 64/174 (36%), Gaps = 18/174 (10%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 D++ IG P ++ GKPF G G + L+SI + R ++ I+ + P Sbjct: 63 GDGPIPCDVLFIGEAPGKNEVEQGKPFVGMAGETFNNYLKSIGLSRDKVRITNTCFFRPI 122 Query: 162 G------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209 NR E+ + R I+ +I +++PKI++ +GN + + Sbjct: 123 KKKVGKTGRTTISNRPPKVSEVNLFRDILDDEIAVVNPKIIITLGNVPLKRL--TEFKSI 180 Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIKKNTWHALITLKKALKNL 261 G I HP L + K + LK+ LK + Sbjct: 181 GDCHGNLYYNVILKRNI--FPMYHPSALTYNRNDKFKTMYEDDWLKLKEVLKTI 232 >gi|148378050|ref|YP_001252591.1| uracil-DNA glycosylase family protein [Clostridium botulinum A str. ATCC 3502] gi|153931907|ref|YP_001382450.1| uracil-DNA glycosylase family protein [Clostridium botulinum A str. ATCC 19397] gi|153937546|ref|YP_001386003.1| uracil-DNA glycosylase family protein [Clostridium botulinum A str. Hall] gi|148287534|emb|CAL81596.1| uracyl DNA glycosilase [Clostridium botulinum A str. ATCC 3502] gi|152927951|gb|ABS33451.1| uracil-DNA glycosylase family protein [Clostridium botulinum A str. ATCC 19397] gi|152933460|gb|ABS38959.1| uracil-DNA glycosylase family protein [Clostridium botulinum A str. Hall] Length = 198 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 73/195 (37%), Gaps = 18/195 (9%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 LK+ +++ + ++ + I D++ IG P ++ GKPF G G + Sbjct: 5 ESLKNKIKNISEEYVGDKTGGYITGDGPIPCDILFIGEAPGKNEVEEGKPFVGMAGKNFE 64 Query: 138 KMLQSIEIMRTQIHISMISPWHPPG------------NRNLSNIEMEICRPIIMRQIELI 185 K L SI + R I I+ + P NR E+ + I+ +I L+ Sbjct: 65 KYLNSIGLKREFIRITNTCFFRPIKIKEGKNGRISISNRPPKVSEISLFSSILDEEINLV 124 Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK- 244 +PK+++ +GN + + G + HP L + Sbjct: 125 NPKLIITLGNVPLKRLTSFKS--IGDCHGNI--YFIENLNRYVFPMYHPSALTYNRSEEF 180 Query: 245 -KNTWHALITLKKAL 258 K + + L++AL Sbjct: 181 HKIYENDWVKLREAL 195 >gi|170760651|ref|YP_001785370.1| uracil-DNA glycosylase family protein [Clostridium botulinum A3 str. Loch Maree] gi|169407640|gb|ACA56051.1| uracil-DNA glycosylase family protein [Clostridium botulinum A3 str. Loch Maree] Length = 198 Score = 99.4 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 75/198 (37%), Gaps = 18/198 (9%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 LK+ +++ + ++ + I D++ IG P ++ GKPF G G + Sbjct: 5 ESLKNKIKNISEEYVGDKTGGYITGDGPIPCDILFIGEAPGKNEVEEGKPFVGMAGKNFE 64 Query: 138 KMLQSIEIMRTQIHISMISPWHPPG------------NRNLSNIEMEICRPIIMRQIELI 185 K L SI++ R I I+ + P NR E+ + I+ +I L+ Sbjct: 65 KYLNSIDLKRESIRITNTCFFRPIKIKEGKNGRISISNRPPKVSEISLFSSILDEEINLV 124 Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK- 244 +PK+++ +GN + + G + HP L + Sbjct: 125 NPKLIITLGNVPLKRLTSFKS--IGDCHGNI--YFIENLNRYVFPMYHPSALTYNRSEEF 180 Query: 245 -KNTWHALITLKKALKNL 261 K + + L+++L + Sbjct: 181 NKIYENDWVKLRESLDKI 198 >gi|260889477|ref|ZP_05900740.1| phage SPO1 DNA polymerase-related protein [Leptotrichia hofstadii F0254] gi|260860888|gb|EEX75388.1| phage SPO1 DNA polymerase-related protein [Leptotrichia hofstadii F0254] Length = 177 Score = 99.4 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 74/183 (40%), Gaps = 8/183 (4%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 ++LK + C L T ++ I + +++ + + S+ +++ K + G Sbjct: 2 WNDLKLEIDICTKCILEKTRINPIVGEGNKKAEILFVLDSISEEEDVKQKLLIDRNGKYF 61 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 K L+ ++ + + + ++ GN + + C ++ QI LI+P+ ++ +G + Sbjct: 62 KKFLEYSKLDLKKCYFTTLTKCSSHGNLIEKDSITK-CNEFLVAQIALINPRYIVTVGER 120 Query: 197 TKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 + + + +GK + + I + L + +K W LI + Sbjct: 121 ATKSLLEDVEKEDIKDLVGKVFDF---YGEIKIVPIYDISYLFKATDKEK--WK-LIKIL 174 Query: 256 KAL 258 + L Sbjct: 175 EKL 177 >gi|169831683|ref|YP_001717665.1| phage SPO1 DNA polymerase-like protein [Candidatus Desulforudis audaxviator MP104C] gi|169638527|gb|ACA60033.1| phage SPO1 DNA polymerase-related protein [Candidatus Desulforudis audaxviator MP104C] Length = 237 Score = 99.4 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 34/156 (21%), Positives = 62/156 (39%), Gaps = 6/156 (3%) Query: 88 HDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM 146 C L + + L+I+G P ++ G PF G++G +L L S+ + Sbjct: 43 RRCPELSPCR--PVPGQGSRRSRLVILGEAPGTDEDAIGHPFVGQSGLLLTAALNSLGVD 100 Query: 147 RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIEL-ISPKILLFIGNKTKNFFFNND 205 R ++ I+ + PP NR + E E CR ++ ++ S ++L +GN F Sbjct: 101 RNRVFITNVVRCRPPNNREPHSAEQEACRQLLKDELTGLPSGVVVLTLGNVPLRFMRGTS 160 Query: 206 AQKTYQNLGKWSN--LCTPHSIIPTLATVHPQELIQ 239 G W + + T HP +++ Sbjct: 161 GPGVTACRGVWLESFRWQRSLVAAVIPTYHPAFVLR 196 >gi|170692666|ref|ZP_02883828.1| Uracil-DNA glycosylase superfamily [Burkholderia graminis C4D1M] gi|170142322|gb|EDT10488.1| Uracil-DNA glycosylase superfamily [Burkholderia graminis C4D1M] Length = 603 Score = 98.7 bits (244), Expect = 7e-19, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 85/301 (28%), Gaps = 67/301 (22%) Query: 2 TSKRILSQEQILTI-ALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60 S ++ E + +Y ++ P + A + I Sbjct: 277 MSGEAVTSESTEALWLGYYEEAVSGETPPVPLRYWRAPPEGPPLPAQLARERICRRGQNA 336 Query: 61 SPLVQQADSIAQKACS--LHELKSLLRSFHDCHLCSTSLSTIC----------------- 101 V A A + L E L + C L + + Sbjct: 337 VVTVPAAPPAGYSALTPPLREPTGPLDTCRRCALWRNAKQPVLGAGAGAGAGAGAGAGAG 396 Query: 102 -----------------------------------ATQTEGQDLMIIGYTPSDSDNISGK 126 + +M++G P + +N G Sbjct: 397 AGAGAGAGAGAGAGAGAAAGAAAGGCVSANANAHAGSTPASPPIMVVGEQPGEYENQHGV 456 Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPW-------HPPGNRNLSNIEMEICRPIIM 179 PF+G G +LD +L + R ++++ +R + E+E C+ + Sbjct: 457 PFTGPAGQLLDSVLARAGLERAALYLTYAVKHYKWEIVGRERIHRTPAQREVEACQYWLD 516 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 +++ ++P++++ +G + +++ H + T HP ++ Sbjct: 517 KELAQLAPRVVVALGPTALRALTGAHVNLS-----EYAGRTISHGGRIIVPTWHPAYALR 571 Query: 240 Y 240 Sbjct: 572 T 572 >gi|153956394|ref|YP_001397159.1| Uracil DNA glycosylase-related protein [Clostridium kluyveri DSM 555] gi|219856707|ref|YP_002473829.1| hypothetical protein CKR_3364 [Clostridium kluyveri NBRC 12016] gi|146349252|gb|EDK35788.1| Uracil DNA glycosylase-related protein [Clostridium kluyveri DSM 555] gi|219570431|dbj|BAH08415.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 198 Score = 98.7 bits (244), Expect = 7e-19, Method: Composition-based stats. Identities = 39/200 (19%), Positives = 73/200 (36%), Gaps = 22/200 (11%) Query: 78 HELKSLLRSFHDCHLCSTS--LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 +++ +R C + I + ++ IG P ++ I GKPF G G Sbjct: 5 EKIREKIREI--CENYKDAPTEGYISGSGPIPCLILFIGEAPGKTEIIQGKPFVGMAGKT 62 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI------------EMEICRPIIMRQIE 183 + L SI + R ++ I+ + P + + E+++ + I+ +I Sbjct: 63 FENYLNSIGLKREEVRITNTCFFRPIKIKISKDGKETISNRTPKIPEIKLFKEILNEEIN 122 Query: 184 LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI--QYP 241 L++PKI++ +GN F + + G + P HP L + Sbjct: 123 LVNPKIIITLGNIPLKSF--TEFDSIGKCHGTI--YFNENLRKPVFPMYHPSALTYNRNK 178 Query: 242 LIKKNTWHALITLKKALKNL 261 + LK AL L Sbjct: 179 NFQSIYEEDWEKLKGALNTL 198 >gi|257415229|ref|ZP_05592223.1| uracil-DNA glycosylase superfamily [Enterococcus faecalis AR01/DG] gi|257157057|gb|EEU87017.1| uracil-DNA glycosylase superfamily [Enterococcus faecalis ARO1/DG] Length = 216 Score = 98.3 bits (243), Expect = 9e-19, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 69/214 (32%), Gaps = 35/214 (16%) Query: 78 HELKSLL-RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 LK + D L + + +M+IG P + PF G++G +L Sbjct: 5 EHLKQAVLAKAKDLPL----EGFVEGQGPQQPKVMLIGEAPGKEEIKENVPFIGRSGQLL 60 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPG-----------------NRNLSNIEMEICRPIIM 179 + LQ + + R ++I+ P NR + E++I P++ Sbjct: 61 MEQLQQVGLNRETVYITSAVRSRPFSVKTKQIAKTGERVTKFPNRTPTKEEIKIFAPLLD 120 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS------------NLCTPHSIIP 227 +I + P+++L +GN G N Sbjct: 121 WEIAVCQPELILTLGNIGLQRLLGPK-PTITAVHGTVIQSPIQTFDEQSQNYHWTQKTYQ 179 Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + HP + +K+ ++K L+ L Sbjct: 180 IIPLFHPAAVFYNYRLKEVVKEDWQVVQKQLQLL 213 >gi|256959791|ref|ZP_05563962.1| uracil-DNA glycosylase [Enterococcus faecalis Merz96] gi|293384979|ref|ZP_06630813.1| putative phage SPO1 DNA polymerase-related protein [Enterococcus faecalis R712] gi|293389249|ref|ZP_06633711.1| putative phage SPO1 DNA polymerase-related protein [Enterococcus faecalis S613] gi|312905968|ref|ZP_07764981.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis DAPTO 512] gi|312909314|ref|ZP_07768170.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis DAPTO 516] gi|256950287|gb|EEU66919.1| uracil-DNA glycosylase [Enterococcus faecalis Merz96] gi|291077657|gb|EFE15021.1| putative phage SPO1 DNA polymerase-related protein [Enterococcus faecalis R712] gi|291081413|gb|EFE18376.1| putative phage SPO1 DNA polymerase-related protein [Enterococcus faecalis S613] gi|310627963|gb|EFQ11246.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis DAPTO 512] gi|311290338|gb|EFQ68894.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis DAPTO 516] Length = 216 Score = 98.3 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 69/214 (32%), Gaps = 35/214 (16%) Query: 78 HELKSLL-RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 LK + D L + + LM+IG P + PF G++G +L Sbjct: 5 EHLKQAVLAKAKDLPL----EGFVEGQGPQQPKLMLIGEAPGKEEIKENVPFIGRSGQLL 60 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPG-----------------NRNLSNIEMEICRPIIM 179 + LQ + + R ++I+ P NR + E++I P++ Sbjct: 61 MEQLQQVGLSRETVYITSAVRSRPFSVKTKQIAKTGERVTKFPNRTPTKEEIKIFAPLLD 120 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS------------NLCTPHSIIP 227 +I + P+++L +GN G N Sbjct: 121 WEIAVCQPELILTLGNIGLQRLLGPK-PTITAVHGTVIQSPIQTFDEQSQNYHWTQKTYQ 179 Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + HP + +K+ ++K L+ L Sbjct: 180 IIPLFHPAAVFYNYRLKEVVKEDWQVVQKQLQLL 213 >gi|257080900|ref|ZP_05575261.1| uracil-DNA glycosylase superfamily [Enterococcus faecalis E1Sol] gi|256988930|gb|EEU76232.1| uracil-DNA glycosylase superfamily [Enterococcus faecalis E1Sol] gi|315146895|gb|EFT90911.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX4244] Length = 216 Score = 98.3 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 69/214 (32%), Gaps = 35/214 (16%) Query: 78 HELKSLL-RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 LK + D L + + +M+IG P + PF G++G +L Sbjct: 5 EHLKQAVLAKAKDLPL----EGFVEGQGPQQPKVMLIGEAPGKEEIKENVPFIGRSGQLL 60 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPG-----------------NRNLSNIEMEICRPIIM 179 + LQ I + R ++I+ P NR + E++I P++ Sbjct: 61 MEQLQQIGLSRETVYITSAVRSRPFSVKTKQITKTGERVTKFPNRTPTKEEIKIFAPLLD 120 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS------------NLCTPHSIIP 227 +I + P+++L +GN G N Sbjct: 121 WEIAVCQPELILTLGNIGLQRLLGPK-PTITAVHGTVIQSPIQTFDEQSQNYHWTQKTYQ 179 Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + HP + +K+ ++K L+ L Sbjct: 180 IIPLFHPAAVFYNYRLKEVVKEDWQVVQKQLQLL 213 >gi|89070851|ref|ZP_01158096.1| putative uracil-DNA glycosylase [Oceanicola granulosus HTCC2516] gi|89043589|gb|EAR49798.1| putative uracil-DNA glycosylase [Oceanicola granulosus HTCC2516] Length = 474 Score = 98.3 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 70/197 (35%), Gaps = 19/197 (9%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 + +L+ + + + LM++G P D ++ G+PF G G M Sbjct: 284 TFDDLRKRAEA-ENRETQPGYGRIVLGEGPADARLMVVGEQPGDVEDREGRPFVGPAGQM 342 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPK 188 D + + R +++ +++ ++ ++E R I ++++L+ PK Sbjct: 343 FDTVAAEAGLERGAAYVTNAVKRFKFTLRGKRRIHQSPTSGDIEHARWWIAQELDLVQPK 402 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL------ 242 ++L +G + + G P TVHP L++ P Sbjct: 403 LILAMGGTAAETLTGSRK-GILKRRGAVEETEYG----PVFLTVHPSYLLRLPDAAAKAA 457 Query: 243 IKKNTWHALITLKKALK 259 L ++ K + Sbjct: 458 ETARFRDDLASVAKLVA 474 >gi|229546484|ref|ZP_04435209.1| uracil-DNA glycosylase [Enterococcus faecalis TX1322] gi|229548599|ref|ZP_04437324.1| uracil-DNA glycosylase [Enterococcus faecalis ATCC 29200] gi|256617541|ref|ZP_05474387.1| uracil-DNA glycosylase superfamily [Enterococcus faecalis ATCC 4200] gi|256761430|ref|ZP_05502010.1| uracil-DNA glycosylase [Enterococcus faecalis T3] gi|256854482|ref|ZP_05559846.1| uracil-DNA glycosylase superfamily [Enterococcus faecalis T8] gi|257089087|ref|ZP_05583448.1| uracil-DNA glycosylase [Enterococcus faecalis CH188] gi|257418275|ref|ZP_05595269.1| uracil-DNA glycosylase [Enterococcus faecalis T11] gi|257420917|ref|ZP_05597907.1| uracil-DNA glycosylase [Enterococcus faecalis X98] gi|307289648|ref|ZP_07569592.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0109] gi|307289927|ref|ZP_07569856.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0411] gi|312904324|ref|ZP_07763486.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0635] gi|312953034|ref|ZP_07771887.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0102] gi|229306230|gb|EEN72226.1| uracil-DNA glycosylase [Enterococcus faecalis ATCC 29200] gi|229308384|gb|EEN74371.1| uracil-DNA glycosylase [Enterococcus faecalis TX1322] gi|256597068|gb|EEU16244.1| uracil-DNA glycosylase superfamily [Enterococcus faecalis ATCC 4200] gi|256682681|gb|EEU22376.1| uracil-DNA glycosylase [Enterococcus faecalis T3] gi|256710042|gb|EEU25086.1| uracil-DNA glycosylase superfamily [Enterococcus faecalis T8] gi|256997899|gb|EEU84419.1| uracil-DNA glycosylase [Enterococcus faecalis CH188] gi|257160103|gb|EEU90063.1| uracil-DNA glycosylase [Enterococcus faecalis T11] gi|257162741|gb|EEU92701.1| uracil-DNA glycosylase [Enterococcus faecalis X98] gi|295114118|emb|CBL32755.1| Uracil-DNA glycosylase [Enterococcus sp. 7L76] gi|306498993|gb|EFM68482.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0411] gi|306499462|gb|EFM68835.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0109] gi|310629063|gb|EFQ12346.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0102] gi|310632420|gb|EFQ15703.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0635] gi|315030532|gb|EFT42464.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX4000] gi|315153897|gb|EFT97913.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0031] gi|315156695|gb|EFU00712.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0043] gi|315159726|gb|EFU03743.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0312] gi|315162698|gb|EFU06715.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0645] gi|315166181|gb|EFU10198.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX1302] gi|315170775|gb|EFU14792.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX1342] gi|315578765|gb|EFU90956.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0630] gi|323479839|gb|ADX79278.1| uracil DNA glycosylase superfamily protein [Enterococcus faecalis 62] Length = 216 Score = 98.3 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 69/214 (32%), Gaps = 35/214 (16%) Query: 78 HELKSLL-RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 LK + D L + + +M+IG P + PF G++G +L Sbjct: 5 EHLKQAVLAKAKDLPL----EGFVEGQGPQQPKVMLIGEAPGKEEIKENVPFIGRSGQLL 60 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPG-----------------NRNLSNIEMEICRPIIM 179 + LQ + + R ++I+ P NR + E++I P++ Sbjct: 61 MEQLQQVGLSRETVYITSAVRSRPFSVKTKQIAKTGERVTKFPNRTPTKEEIKIFAPLLD 120 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS------------NLCTPHSIIP 227 +I + P+++L +GN G N Sbjct: 121 WEIAVCQPELILTLGNIGLQRLLGPK-PTITAVHGTVIQSPIQTFDEQSQNYHWTQKTYQ 179 Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + HP + +K+ ++K L+ L Sbjct: 180 IIPLFHPAAVFYNYRLKEVVKEDWQVVQKQLQLL 213 >gi|28209837|ref|NP_780781.1| DNA polymerase [Clostridium tetani E88] gi|28202272|gb|AAO34718.1| DNA polymerase, bacteriophage-type [Clostridium tetani E88] Length = 173 Score = 98.3 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 39/173 (22%), Positives = 64/173 (36%), Gaps = 17/173 (9%) Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160 + D++ IG P ++ GKPF G G L I + R I I+ + P Sbjct: 1 MGSGPIPCDILFIGEAPGKTEVEEGKPFVGAAGKNFQYYLDMINLNRKDIRITNTCYFRP 60 Query: 161 PG------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQK 208 NR E+ + + I+ ++IE ++PKI++ +GN F +N Sbjct: 61 IKIKMSSSGRKTISNRPPKTSEINLFQHILKKEIETVNPKIIITLGNTPLKTF-DNYNAT 119 Query: 209 TYQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIKKNTWHALITLKKALK 259 G L + + HP LI + K++ L LK Sbjct: 120 IGHRHGSL--LFSEKLNMHIFPMYHPSALIYNRTDSFKESYKEDWCKLADILK 170 >gi|315149397|gb|EFT93413.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0012] Length = 216 Score = 98.3 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 69/214 (32%), Gaps = 35/214 (16%) Query: 78 HELKSLL-RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 LK + D L + + +M+IG P + PF G++G +L Sbjct: 5 EHLKKAVLAKAKDLPL----EGFVEGQGPQQPKVMLIGEAPGKEEIKENVPFIGRSGQLL 60 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPG-----------------NRNLSNIEMEICRPIIM 179 + LQ + + R ++I+ P NR + E++I P++ Sbjct: 61 MEQLQQVGLSRETVYITSAVRSRPFSVKTKQIAKTGERVTKFPNRTPTKEEIKIFAPLLD 120 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS------------NLCTPHSIIP 227 +I + P+++L +GN G N Sbjct: 121 WEIAVCQPELILTLGNIGLQRLLGPK-PTITAVHGTVIQSTIQTFDEQSQNYHWTQKTYQ 179 Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + HP + +K+ ++K L+ L Sbjct: 180 IIPLFHPAAVFYNYRLKEVVKEDWQVVQKQLQLL 213 >gi|29375258|ref|NP_814411.1| phage SPO1 DNA polymerase-related protein, putative [Enterococcus faecalis V583] gi|227517621|ref|ZP_03947670.1| uracil-DNA glycosylase [Enterococcus faecalis TX0104] gi|227554773|ref|ZP_03984820.1| uracil-DNA glycosylase [Enterococcus faecalis HH22] gi|255971119|ref|ZP_05421705.1| uracil-DNA glycosylase [Enterococcus faecalis T1] gi|255973731|ref|ZP_05424317.1| uracil-DNA glycosylase [Enterococcus faecalis T2] gi|256957477|ref|ZP_05561648.1| uracil-DNA glycosylase superfamily [Enterococcus faecalis DS5] gi|256964557|ref|ZP_05568728.1| uracil-DNA glycosylase [Enterococcus faecalis HIP11704] gi|257077533|ref|ZP_05571894.1| uracil-DNA glycosylase [Enterococcus faecalis JH1] gi|294780443|ref|ZP_06745808.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis PC1.1] gi|300861844|ref|ZP_07107924.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TUSoD Ef11] gi|307268181|ref|ZP_07549566.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX4248] gi|307272471|ref|ZP_07553724.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0855] gi|307278251|ref|ZP_07559330.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0860] gi|312900247|ref|ZP_07759559.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0470] gi|29342717|gb|AAO80482.1| phage SPO1 DNA polymerase-related protein, putative [Enterococcus faecalis V583] gi|227074927|gb|EEI12890.1| uracil-DNA glycosylase [Enterococcus faecalis TX0104] gi|227176072|gb|EEI57044.1| uracil-DNA glycosylase [Enterococcus faecalis HH22] gi|255962137|gb|EET94613.1| uracil-DNA glycosylase [Enterococcus faecalis T1] gi|255966603|gb|EET97225.1| uracil-DNA glycosylase [Enterococcus faecalis T2] gi|256947973|gb|EEU64605.1| uracil-DNA glycosylase superfamily [Enterococcus faecalis DS5] gi|256955053|gb|EEU71685.1| uracil-DNA glycosylase [Enterococcus faecalis HIP11704] gi|256985563|gb|EEU72865.1| uracil-DNA glycosylase [Enterococcus faecalis JH1] gi|294452442|gb|EFG20879.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis PC1.1] gi|300848369|gb|EFK76126.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TUSoD Ef11] gi|306505002|gb|EFM74193.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0860] gi|306510756|gb|EFM79773.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0855] gi|306515450|gb|EFM83980.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX4248] gi|311292608|gb|EFQ71164.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0470] gi|315034413|gb|EFT46345.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0027] gi|315144550|gb|EFT88566.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX2141] gi|315166886|gb|EFU10903.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX1341] gi|315173943|gb|EFU17960.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX1346] gi|315575395|gb|EFU87586.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0309B] gi|315581453|gb|EFU93644.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0309A] gi|327534243|gb|AEA93077.1| uracil-DNA glycosylase [Enterococcus faecalis OG1RF] gi|329576929|gb|EGG58412.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX1467] Length = 216 Score = 98.3 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 69/214 (32%), Gaps = 35/214 (16%) Query: 78 HELKSLL-RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 LK + D L + + +M+IG P + PF G++G +L Sbjct: 5 EHLKKAVLAKAKDLPL----EGFVEGQGPQQPKVMLIGEAPGKEEIKENVPFIGRSGQLL 60 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPG-----------------NRNLSNIEMEICRPIIM 179 + LQ + + R ++I+ P NR + E++I P++ Sbjct: 61 MEQLQQVGLSRETVYITSAVRSRPFSVKTKQIAKTGERVTKFPNRTPTKEEIKIFAPLLD 120 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS------------NLCTPHSIIP 227 +I + P+++L +GN G N Sbjct: 121 WEIAVCQPELILTLGNIGLQRLLGPK-PTITAVHGTVIQSPIQTFDEQSQNYHWTQKTYQ 179 Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + HP + +K+ ++K L+ L Sbjct: 180 IIPLFHPAAVFYNYRLKEVVKEDWQVVQKQLQLL 213 >gi|315031358|gb|EFT43290.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0017] Length = 216 Score = 97.5 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 70/214 (32%), Gaps = 35/214 (16%) Query: 78 HELKSLL-RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 LK + D L + ++ +M+IG P + PF G++G +L Sbjct: 5 EHLKQAVLAKAKDLPL----EGFVEGQGSQQPKVMLIGEAPGKEEIKENVPFIGRSGQLL 60 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPG-----------------NRNLSNIEMEICRPIIM 179 + LQ + + R ++I+ P NR + E++I P++ Sbjct: 61 MEQLQQVGLSRETVYITSAVRSRPFSVKTKQIAKTGERVTKFPNRTPTKEEIKIFAPLLD 120 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS------------NLCTPHSIIP 227 +I + P+++L +GN G N Sbjct: 121 WEIAVCQPELILTLGNIGLQRLLGPK-PTITAVHGTVIQSPIQTFDEQSQNYHWTQKTYQ 179 Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + HP + +K+ ++K L+ L Sbjct: 180 IIPLFHPAAVFYNYRLKEVVKEDWQVVQKQLQLL 213 >gi|257086014|ref|ZP_05580375.1| uracil-DNA glycosylase superfamily [Enterococcus faecalis D6] gi|256994044|gb|EEU81346.1| uracil-DNA glycosylase superfamily [Enterococcus faecalis D6] gi|315025659|gb|EFT37591.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX2137] Length = 216 Score = 97.5 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 70/214 (32%), Gaps = 35/214 (16%) Query: 78 HELKSLL-RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 LK + D L + ++ +M+IG P + PF G++G +L Sbjct: 5 EHLKKAVLAKAKDLPL----EGFVEGQGSQQPKVMLIGEAPGKEEIKENVPFIGRSGQLL 60 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPG-----------------NRNLSNIEMEICRPIIM 179 + LQ + + R ++I+ P NR + E++I P++ Sbjct: 61 MEQLQQVGLSRETVYITSAVRSRPFSVKTKQIAKTGERVTKFPNRTPTKEEIKIFAPLLD 120 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS------------NLCTPHSIIP 227 +I + P+++L +GN G N Sbjct: 121 WEIAVCQPELILTLGNIGLQRLLGPK-PTITAVHGTVIQSPIQTFDEQSQNYHWTQKTYQ 179 Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + HP + +K+ ++K L+ L Sbjct: 180 IIPLFHPAAVFYNYRLKEVVKEDWQVVQKQLQLL 213 >gi|307277057|ref|ZP_07558162.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX2134] gi|306506228|gb|EFM75393.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX2134] Length = 216 Score = 97.5 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 68/212 (32%), Gaps = 35/212 (16%) Query: 78 HELKSLL-RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 LK + D L + + +M+IG P + PF G++G +L Sbjct: 5 EHLKQAVLAKAKDLPL----EGFVEGQGPQQPKVMLIGEAPGKEEIKENVPFIGRSGQLL 60 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPG-----------------NRNLSNIEMEICRPIIM 179 + LQ + + R ++I+ P NR + E++I P++ Sbjct: 61 MEQLQQVGLSRETVYITSAVRSRPFSVKTKQIAKTGERVTKFPNRTPTKEEIKIFAPLLD 120 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS------------NLCTPHSIIP 227 +I + P+++L +GN G N Sbjct: 121 WEIAVCQPELILTLGNIGLQRLLGPK-PTITAVHGTVIQSPIQTFDEQSQNYHWTQKTYQ 179 Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALK 259 + HP + +K+ ++K L+ Sbjct: 180 IIPLFHPAAVFYNYRLKEVVKEDWQVVQKQLQ 211 >gi|94497580|ref|ZP_01304149.1| hypothetical protein SKA58_08694 [Sphingomonas sp. SKA58] gi|94422997|gb|EAT08029.1| hypothetical protein SKA58_08694 [Sphingomonas sp. SKA58] Length = 246 Score = 97.5 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 51/261 (19%), Positives = 93/261 (35%), Gaps = 24/261 (9%) Query: 1 MTSKRILSQEQ----ILTIALFYADSGVY-WVFDEPNNEATYESQRKEKSIDSAIQPITN 55 MT+ R + Q+ ++ +GV V + P N A+ P++ Sbjct: 1 MTAMRGIIQDDGQIAAQAYLTWWQSAGVDSAVAEAPINWL-----------RPAVAPVSG 49 Query: 56 IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115 V + H L+ H I + LMI+ Sbjct: 50 HSASRPTSVVTNQKPKELESFQHWLQDDSAHPE--HRWPGR--AILPAGSVDAPLMIVTD 105 Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICR 175 P +D +G + + G + D ML++I + R ++++ + PPG + Sbjct: 106 MPDPADLDAGTLLADRAGGLCDAMLRAIALDRADVYVASLFFRRPPGGMVEAADLAAAAD 165 Query: 176 PIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 + + L P+ LL +G++T + + N I+P +AT HP+ Sbjct: 166 R-MRTHVHLARPRRLLLLGDRTVRALMPVSGEVQPDS---LRNFNHDGGIVPAVATFHPR 221 Query: 236 ELIQYPLIKKNTWHALITLKK 256 L+ P K W AL +L + Sbjct: 222 LLLSQPAAKAECWRALQSLIE 242 >gi|257083589|ref|ZP_05577950.1| uracil-DNA glycosylase [Enterococcus faecalis Fly1] gi|256991619|gb|EEU78921.1| uracil-DNA glycosylase [Enterococcus faecalis Fly1] Length = 216 Score = 97.5 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 68/214 (31%), Gaps = 35/214 (16%) Query: 78 HELKSLL-RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 LK + D L + + +M+IG P + PF G++G +L Sbjct: 5 EHLKKAVLAKAKDLPL----EGFVEGQGPQQPKVMLIGEAPGKEEIKENVPFIGRSGQLL 60 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPG-----------------NRNLSNIEMEICRPIIM 179 + LQ + + R ++I+ P NR + E++I P++ Sbjct: 61 MEQLQQVGLSRETVYITSAVRSRPFSVKTKQIAKTGERVTKFPNRTPTKEEIKIFAPLLD 120 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN------------LCTPHSIIP 227 +I + P+++L +GN G Sbjct: 121 WEIAVCQPELILTLGNIGLQRLLGPK-PTITAVHGTVIQSPIQTFDEQSQSYHWTQKTYQ 179 Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + HP + +K+ ++K L+ L Sbjct: 180 IIPLFHPAAVFYNYRLKEVVKEDWQVVQKQLQLL 213 >gi|269121242|ref|YP_003309419.1| uracil-DNA glycosylase-like protein [Sebaldella termitidis ATCC 33386] gi|268615120|gb|ACZ09488.1| Uracil-DNA glycosylase-like protein [Sebaldella termitidis ATCC 33386] Length = 184 Score = 97.1 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 67/185 (36%), Gaps = 7/185 (3%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 EL+ + H C L + I + +M + S+ ++ G K G Sbjct: 4 WDELEMEINICHKCPLEKVRSNPILGKGDKTSKVMFVLDQISEQEDNRGILLIDKKGEYF 63 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 K L+ + +++++ + G ++ C ++ QI L++PKI++ +G Sbjct: 64 LKFLEFSKFDTDKVYMTNLFKCTAKGELAE-KRIIKACEEYLLTQIALVNPKIIVTVGEL 122 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 F D +GK I L L + +K W L+ + + Sbjct: 123 VTRQFIKEDFNDMRDIVGKEFPYA---GGIRILPVYDLMYLFKATDKEK--WQ-LVKILE 176 Query: 257 ALKNL 261 L N+ Sbjct: 177 KLNNI 181 >gi|261410020|ref|YP_003246261.1| uracil-DNA glycosylase superfamily protein [Paenibacillus sp. Y412MC10] gi|261286483|gb|ACX68454.1| uracil-DNA glycosylase superfamily [Paenibacillus sp. Y412MC10] Length = 182 Score = 96.7 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 55/181 (30%), Gaps = 9/181 (4%) Query: 84 LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK---PFSGKTGNMLDKML 140 ++ C LC I LM+I P ++ + PF T L + Sbjct: 1 MKHCERCELCKQRNRFIWGEGNPQGSLMMILDNPGAREDREDREGNPFLYGTRETLQLGM 60 Query: 141 QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF 200 + + ++++ + P C P + Q+ P +L GN Sbjct: 61 REAGMDIHSVYVAYLLK-RRPTRAYDKPATRAACLPHLQSQLLQKQPLLLFGFGNVVVEG 119 Query: 201 FF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 F + + G W IP T HP + + + + L L+ + Sbjct: 120 LFPQKENATVKELRGSWHEFE----GIPIGFTYHPLAVRRRLNLLRFFVEDLKGLRAKWE 175 Query: 260 N 260 Sbjct: 176 E 176 >gi|307069568|ref|YP_003878045.1| putative uracil-DNA glycosylase, family 4 [Candidatus Zinderia insecticola CARI] gi|306482828|gb|ADM89699.1| putative uracil-DNA glycosylase, family 4 [Candidatus Zinderia insecticola CARI] Length = 214 Score = 96.7 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 74/166 (44%), Gaps = 7/166 (4%) Query: 80 LKSLLRSFHDCHLCSTSLSTICATQTEGQ-DLMIIGYTPSDSDNISGKPFSGKTGNMLDK 138 L + + + C L + + + + IG P +++ G PF GK+G +L+ Sbjct: 31 LYNKINNCKKCILHKNKIRNVLGNKNIKKIKYFFIGEGPGKMEDLKGYPFIGKSGKLLNY 90 Query: 139 MLQSIEIMRTQIHISMISPWHPPGNRN----LSNIEMEICRPIIMRQIELISPKILLFIG 194 ++ ++ + +I+I+ + +N + E+ C + ++I++I PKI++ +G Sbjct: 91 LINKLKYKKKEIYITNVIKCISKNIKNKNIFPNKKEILKCLFYLKKEIKIIKPKIIITLG 150 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 + FN + K K N + IP ++ HP L++ Sbjct: 151 KIAFSSIFNINKNKFTIKKNK--NKIYYYYNIPLISIYHPSYLLRN 194 >gi|227530158|ref|ZP_03960207.1| uracil-DNA glycosylase [Lactobacillus vaginalis ATCC 49540] gi|227349911|gb|EEJ40202.1| uracil-DNA glycosylase [Lactobacillus vaginalis ATCC 49540] Length = 216 Score = 96.4 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 64/189 (33%), Gaps = 30/189 (15%) Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160 DLM++G P + + PFSG +G L KML +I R ++I+ + P Sbjct: 27 PGQGKLKPDLMLVGEAPGRHEEVHNIPFSGASGKELMKMLATIGYDRDSVYITSVVRQRP 86 Query: 161 PG-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 NR + E+ + ++ + PKI++ +GN Sbjct: 87 YSIKEVVDKKTGAKVTKKPNRTPTKKEVLAFANLFDWELAQVQPKIIVPLGNTALQRLLG 146 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIP------------TLATVHPQELIQYPLIKKNTWHAL 251 A + G+ + H+ + HP ++ ++ Sbjct: 147 PQA-NIGKLHGRLLDQPIQHAKKDGSGYELATTNSLLVPMYHPAAVLYSRKLEPTILRDW 205 Query: 252 ITLKKALKN 260 L + ++N Sbjct: 206 QRLGEFIQN 214 >gi|238027270|ref|YP_002911501.1| phage SPO1 DNA polymerase-like protein [Burkholderia glumae BGR1] gi|237876464|gb|ACR28797.1| Phage SPO1 DNA polymerase-related protein [Burkholderia glumae BGR1] Length = 218 Score = 96.4 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 75/181 (41%), Gaps = 13/181 (7%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 +L + L + C L +++ + +M++G P D+ SG+PFSG G +LD Sbjct: 11 PDLPATLDACRRCELWASASRPVAGAGPRRAAIMLVGEQPDAQDDRSGQPFSGTAGRLLD 70 Query: 138 KMLQSIEIMRTQIHISMISPW-------HPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 + L + R++ + + P + + E++ CR + R+I ++P+++ Sbjct: 71 RALTEASLARSETYATYALKHLRRDAAGRPRADEAPAGHELDACRYWLEREIRSVAPRVI 130 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI--KKNTW 248 + G ++ ++ P +AT+ P ++++ ++ W Sbjct: 131 VAFGTAALRAVLDDPQAAVHRM---PLPYRLPGGE-RVIATLAPAQVLRTRGADSRERAW 186 Query: 249 H 249 Sbjct: 187 Q 187 >gi|148544738|ref|YP_001272108.1| uracil-DNA glycosylase superfamily protein [Lactobacillus reuteri DSM 20016] gi|184154090|ref|YP_001842431.1| putative uracil-DNA glycosylase [Lactobacillus reuteri JCM 1112] gi|227363863|ref|ZP_03847968.1| uracil-DNA glycosylase [Lactobacillus reuteri MM2-3] gi|325683073|ref|ZP_08162589.1| uracil-DNA glycosylase [Lactobacillus reuteri MM4-1A] gi|148531772|gb|ABQ83771.1| Uracil-DNA glycosylase superfamily [Lactobacillus reuteri DSM 20016] gi|183225434|dbj|BAG25951.1| putative uracil-DNA glycosylase [Lactobacillus reuteri JCM 1112] gi|227071090|gb|EEI09408.1| uracil-DNA glycosylase [Lactobacillus reuteri MM2-3] gi|324977423|gb|EGC14374.1| uracil-DNA glycosylase [Lactobacillus reuteri MM4-1A] Length = 217 Score = 96.4 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 30/194 (15%), Positives = 63/194 (32%), Gaps = 30/194 (15%) Query: 97 LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156 DLM++G P + PFSG +G L K+++SI R+ ++I+ + Sbjct: 23 TGFTPGQGPLNPDLMLVGEAPGRHEEKVNIPFSGASGQELMKLIESIGYSRSTVYITSVV 82 Query: 157 PWHPPGNRN-----------------LSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199 P + + E+ P+ ++ + PKI++ +GN Sbjct: 83 RQRPYSIKKVVDKKTGEVIEKKPNRTPTKKEVLAFAPLFDWELAQVKPKIIVTLGNTALQ 142 Query: 200 FFFNNDAQKTYQNLGKWS------------NLCTPHSIIPTLATVHPQELIQYPLIKKNT 247 + A + G+ + HP ++ ++ Sbjct: 143 RLLGSQA-NISKLHGQLLHEKIQRTNDAHDGYELTADKHWIMPMYHPAAVLYARRLEPTI 201 Query: 248 WHALITLKKALKNL 261 L + +K + Sbjct: 202 KADWQQLGQDIKKM 215 >gi|284163459|ref|YP_003401738.1| phage SPO1 DNA polymerase-related protein [Haloterrigena turkmenica DSM 5511] gi|284013114|gb|ADB59065.1| phage SPO1 DNA polymerase-related protein [Haloterrigena turkmenica DSM 5511] Length = 213 Score = 95.6 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 63/182 (34%), Gaps = 24/182 (13%) Query: 98 STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP 157 + D+M++G P + G+PF G+ G LD+ L+SI R +++I+ + Sbjct: 31 RFVPGVGPLSADVMLVGEAPGGQEVEQGEPFVGQAGQQLDRALESIGHDRRELYITNLVK 90 Query: 158 WHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS 217 PP NR+ E+E P++ ++E + P +++ +G+ D + G+ Sbjct: 91 VRPPENRDPHVDEIEAWWPVLEAELERVDPVVVVPMGSFATAELLETD-ETITDLHGEEF 149 Query: 218 NLC-----------------------TPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 + + HP + L Sbjct: 150 EREVPPASHASNEEGTGSSSEGGADPGERTERIVRPSFHPAAALYDRSKVDAIESDLRAA 209 Query: 255 KK 256 + Sbjct: 210 LE 211 >gi|58580293|ref|YP_199309.1| DNA polymerase related protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|58424887|gb|AAW73924.1| DNA polymerase related protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 368 Score = 95.2 bits (235), Expect = 8e-18, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 56/156 (35%), Gaps = 21/156 (13%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60 M K + + ++ ++GV E E R A QP T Sbjct: 225 MPQKYWKNLPEAASLPELIREAGVRV---REMAERAPEPVRPRVPAAPAPQPDTTTH--- 278 Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120 SL +L+S R C L + T+ + +M+IG P D Sbjct: 279 ---------------SLAQLRSAARDCRRCELWQPATQTVFGEGPDDASVMVIGEQPGDE 323 Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156 +++SG+PF G G + L + + R + +++ Sbjct: 324 EDLSGRPFVGPAGRLFTMALGELGVDRQRFYVTNAV 359 >gi|194466997|ref|ZP_03072984.1| Uracil-DNA glycosylase superfamily [Lactobacillus reuteri 100-23] gi|194454033|gb|EDX42930.1| Uracil-DNA glycosylase superfamily [Lactobacillus reuteri 100-23] Length = 217 Score = 95.2 bits (235), Expect = 8e-18, Method: Composition-based stats. Identities = 30/194 (15%), Positives = 63/194 (32%), Gaps = 30/194 (15%) Query: 97 LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156 DLM++G P + PFSG +G L K+++SI R+ ++I+ + Sbjct: 23 TGFTPGQGQLNPDLMLVGEAPGRHEEEVNIPFSGASGQELMKLIESIGYSRSTVYITSVV 82 Query: 157 PWHPPGNRN-----------------LSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199 P + + E+ P+ ++ + PKI++ +GN Sbjct: 83 RQRPYSIKKVVDKKTGEVIEKKPNRTPTKKEVLAFAPLFDWELAQVKPKIIVTLGNTALQ 142 Query: 200 FFFNNDAQKTYQNLGKWS------------NLCTPHSIIPTLATVHPQELIQYPLIKKNT 247 + A + G+ + HP ++ ++ Sbjct: 143 RLLGSQA-NIGKLHGQLLHEKIQRTNDAHDGYELTTDKHWIMPMYHPAAVLYARRLEPTI 201 Query: 248 WHALITLKKALKNL 261 L + +K + Sbjct: 202 KADWQQLGQDIKKM 215 >gi|91777900|ref|YP_553108.1| hypothetical protein Bxe_B2228 [Burkholderia xenovorans LB400] gi|91690560|gb|ABE33758.1| Conserved hypothetical protein [Burkholderia xenovorans LB400] Length = 507 Score = 94.8 bits (234), Expect = 9e-18, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 74/215 (34%), Gaps = 21/215 (9%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P A +R S + + I V L E L + C Sbjct: 280 PPLPAHLARERSRLGAQSGTVTVPEMPPIEYSAVTPP---------LREPTGPLATCRRC 330 Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150 L + + +M++G P + +N +G PF+G G++LD +L + R + Sbjct: 331 ALWRNAKQAVAGAGAAQAAIMVVGEQPGEDENQNGAPFTGPAGHLLDTVLARAGLERAAL 390 Query: 151 HISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 +++ + +R + E+E C+ + ++ + P++++ +G Sbjct: 391 YLTYAVKHYKWETIEQQRVHRTPALREVEACQYWLEHELARVVPRVVVTLGATALKALTG 450 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238 + ++ H + T HP + Sbjct: 451 AHVNLS-----EYLGQTICHGGRLIVPTWHPSYAL 480 >gi|325204828|gb|ADZ00282.1| putative uracil-DNA glycosylase, family 4 [Neisseria meningitidis M01-240355] Length = 247 Score = 94.8 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 89/270 (32%), Gaps = 37/270 (13%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDE----------PNNEATYESQRKEKSIDSAI 50 M S R L + L + + G + P + ++ + Sbjct: 1 MLSARYLHLHEALGLGPMWLKRGAVVLPSATLPESPTQIRPQKQTVLSIPQRPSEQHTGQ 60 Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 + ++ + + V + L + + + A L Sbjct: 61 ARLETMKALETAAVPTRKPAPETETPLSGVSDGIA-------------PVPAASGI-TKL 106 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170 ++ P D + G+ F GK G +LD +L+++ + +H + GN S Sbjct: 107 AVVSLCPPIEDAVYGQLFYGKAGVLLDNILKAVGLDAAYVHKTCWVKTAAVGNPMPSEAA 166 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230 +E +M++++ +LF+G F + Q + L P Sbjct: 167 IETATVSVMQELDGCRAPAVLFLG----QAFVQPERQTMIETL---------CGSRPFFI 213 Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALKN 260 HP L++ P +K W L LK+AL+ Sbjct: 214 IDHPARLLRQPELKARAWQVLKQLKRALRQ 243 >gi|325139231|gb|EGC61777.1| putative uracil-DNA glycosylase, family 4 [Neisseria meningitidis ES14902] Length = 247 Score = 94.8 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 46/270 (17%), Positives = 89/270 (32%), Gaps = 37/270 (13%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDE----------PNNEATYESQRKEKSIDSAI 50 M S R L + L + + G + P + ++ + Sbjct: 1 MLSARYLHLHEALGLGPMWLKRGAVVLPPATLPESPTQIRPQKQTVLSIPQRPSEQHTGQ 60 Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 + ++ + + V + L L + A+ L Sbjct: 61 ARLKTMKVLETTAVHTRKPAPETETPLSGLSDGIAPVSA------------ASGIT--KL 106 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170 ++ P D + G+ F GK G +LD +L+++ + +H + GN S Sbjct: 107 AVVSLCPPIEDAVYGQLFYGKAGVLLDNILKAVGLDAAYVHKTCWVKTAAVGNPMPSEAA 166 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230 +E +M++++ +LF+G F + Q + L P Sbjct: 167 IETATVSVMQELDGCRAPAVLFLG----QAFVQPERQTMIETL---------CGSRPFFI 213 Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALKN 260 HP L++ P +K W L LK+AL+ Sbjct: 214 IDHPARLLRQPELKARAWQVLKQLKRALRQ 243 >gi|56964361|ref|YP_176092.1| uracil-DNA glycosylase [Bacillus clausii KSM-K16] gi|56910604|dbj|BAD65131.1| uracil-DNA glycosylase [Bacillus clausii KSM-K16] Length = 214 Score = 94.4 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 69/218 (31%), Gaps = 40/218 (18%) Query: 74 ACSLHEL-KSLLRS--FHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130 + L EL K + L E D++ +G P + + KPF+G Sbjct: 3 SKQLQELGKKRIAPYPCEGFLL---------GGGNEEADVLFVGEAPGRDELQTHKPFTG 53 Query: 131 KTGNMLDKMLQSIEIMRTQIHISMISPWHPP--------------GNRNLSNIEMEICRP 176 + G L+ L+ I R I+I+ + P GNR + E+ P Sbjct: 54 RAGANLNGFLKEAGINREDIYITSVVRSRPYKHDVKSSKKPIEERGNRTPTQKEIIAHAP 113 Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS-------------NLCTPH 223 ++ I + PK+++ +G GK L Sbjct: 114 LLDEMINQLDPKLIVTLGTIALKRLVGP-GLNLQDVHGKPFCTRLLQLPSLESSKLVRGE 172 Query: 224 SIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 T HP + P + + + L+ L +L Sbjct: 173 RQQHVFPTFHPASVFYNPTLATAITNDMRQLRAVLDSL 210 >gi|329667096|gb|AEB93044.1| DNA polymerase [Lactobacillus johnsonii DPC 6026] Length = 212 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 58/189 (30%), Gaps = 31/189 (16%) Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160 LMI+G P + S PF G +G L K L SI + R ++I+ P Sbjct: 25 FGAGPVHPKLMIVGEAPGREEIKSLIPFHGASGKELMKSLASIGLKREDVYITSAVRSRP 84 Query: 161 PG-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 NR + E+ P + +I + PKI++ +G + Sbjct: 85 YSIKHTFSKKENKEVIKYPNRKPTKKEIMAHAPFLDYEINCVKPKIIVTVGTTALTRLLD 144 Query: 204 NDAQKTYQNLGKWSN-------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 D + GK + HP + + + Sbjct: 145 -DKYEISNVHGKIIENTPILELNDKKDGYIWSKEKYIVVPQYHPAAVFYNRKLTEIIAQD 203 Query: 251 LITLKKALK 259 + +K +K Sbjct: 204 WLNVKLLIK 212 >gi|293572085|ref|ZP_06683096.1| DNA polymerase [Enterococcus faecium E980] gi|291607870|gb|EFF37181.1| DNA polymerase [Enterococcus faecium E980] Length = 213 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 56/191 (29%), Gaps = 30/191 (15%) Query: 99 TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158 + LM++G P ++ + PFSG+ G L + L S + R ++I+ Sbjct: 23 FVAGQGPLHPKLMLVGEAPGKTEIDTHIPFSGQAGKELMQALSSTGLTREDVYITSAVRS 82 Query: 159 HPPGNRN-----------------LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 P + + E+ PI+ ++ I PK++ +GN Sbjct: 83 RPYRVTHWINKRTQQTETVYPNRTPTRSEVFAHAPILDYELMEIQPKLIATLGNIGLQRL 142 Query: 202 FNNDAQKTYQNLGKWSN------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249 +N G+ L HP + + Sbjct: 143 LG-KEYTVTKNHGQLYTGPVLQLTKQKDAYEWSEKNYRILPLFHPAAIFYNRSLVPVIHQ 201 Query: 250 ALITLKKALKN 260 L L+ Sbjct: 202 DWQVLASLLQQ 212 >gi|262037920|ref|ZP_06011345.1| phage SPO1 DNA polymerase-related protein [Leptotrichia goodfellowii F0264] gi|261748063|gb|EEY35477.1| phage SPO1 DNA polymerase-related protein [Leptotrichia goodfellowii F0264] Length = 181 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 26/180 (14%), Positives = 70/180 (38%), Gaps = 7/180 (3%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 ++L++ + CHL + + + ++ + + S +++ + K G Sbjct: 2 WNDLETEIGICTKCHLERIRTNPVTGKGSRKAKILFVLESVSKKEDLKNDLLADKKGEYF 61 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 K L+ +I ++ + + ++ G + + CR + QI L++P+ ++ +G Sbjct: 62 KKFLEYSKINLSECYFTTLTKCSSHGELIEN-ECIVKCRDYLTTQIALLNPEYIITVGEI 120 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 F + ++ +GK I + L++ +K W + L++ Sbjct: 121 PTKNFIKSK-EEIRDMVGKIYGYT---GGIKIIPVYDLSYLLKAGDKEK--WQVVKILEE 174 >gi|227550428|ref|ZP_03980477.1| uracil-DNA glycosylase [Enterococcus faecium TX1330] gi|257888457|ref|ZP_05668110.1| uracil-DNA glycosylase [Enterococcus faecium 1,141,733] gi|257897168|ref|ZP_05676821.1| uracil-DNA glycosylase [Enterococcus faecium Com12] gi|293377810|ref|ZP_06623996.1| uracil-DNA glycosylase, family 4 [Enterococcus faecium PC4.1] gi|227180329|gb|EEI61301.1| uracil-DNA glycosylase [Enterococcus faecium TX1330] gi|257824511|gb|EEV51443.1| uracil-DNA glycosylase [Enterococcus faecium 1,141,733] gi|257833733|gb|EEV60154.1| uracil-DNA glycosylase [Enterococcus faecium Com12] gi|292643558|gb|EFF61682.1| uracil-DNA glycosylase, family 4 [Enterococcus faecium PC4.1] Length = 213 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 56/191 (29%), Gaps = 30/191 (15%) Query: 99 TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158 + LM++G P ++ + PFSG+ G L + L S + R ++I+ Sbjct: 23 FVAGQGPLHPKLMLVGEAPGKTEIDTHIPFSGQAGKELMQALSSTGLTREDVYITSAVRS 82 Query: 159 HPPGNRN-----------------LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 P + + E+ PI+ ++ + PK++ +GN Sbjct: 83 RPYRVTHRINKRTQQTETVYPNRTPTRSEVFAHAPILDYELMEVQPKLIATLGNIGLQRL 142 Query: 202 FNNDAQKTYQNLGKWSN------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249 +N G+ L HP + + Sbjct: 143 LG-KEYTVTKNHGQLYTGPVLQLTKQKDAYEWSEKNYRILPLFHPAAIFYNRSLVPVIHQ 201 Query: 250 ALITLKKALKN 260 L L+ Sbjct: 202 DWQVLASLLQQ 212 >gi|257899166|ref|ZP_05678819.1| uracil-DNA glycosylase [Enterococcus faecium Com15] gi|257837078|gb|EEV62152.1| uracil-DNA glycosylase [Enterococcus faecium Com15] Length = 213 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 57/191 (29%), Gaps = 30/191 (15%) Query: 99 TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158 + LM++G P ++ + PFSG+ G L + L S + R +++I+ Sbjct: 23 FVAGQGPLHPKLMLVGEAPGKTEIDTHIPFSGQAGKELMQALSSTGLTREEVYITSAVRS 82 Query: 159 HPPGNRN-----------------LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 P + + E+ PI+ ++ + PK++ +GN Sbjct: 83 RPYRVTHRINKRTQQTETVYPNRTPTRSEVFAHAPILDYELMEVQPKLIATLGNIGLQRL 142 Query: 202 FNNDAQKTYQNLGKWSN------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249 +N G+ L HP + + Sbjct: 143 LG-KEYTVTKNHGQLYTGPVLQLTEQKDAYEWSEKNYRILPLFHPAAIFYNRSLVPVIHQ 201 Query: 250 ALITLKKALKN 260 L L+ Sbjct: 202 DWQVLASLLQQ 212 >gi|325206784|gb|ADZ02237.1| putative uracil-DNA glycosylase, family 4 [Neisseria meningitidis M04-240196] Length = 247 Score = 93.7 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 43/270 (15%), Positives = 85/270 (31%), Gaps = 37/270 (13%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDE----------PNNEATYESQRKEKSIDSAI 50 M S R L + L + + G + P + ++ + Sbjct: 1 MLSARYLHLHEALGLGPMWLKRGAVVLPSATLPESPTQIRPQKQTVLSIPQRPSEQHTGQ 60 Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 + ++ + + V + L + + + A L Sbjct: 61 ARLKTMKVLETTAVHTRKPAPETETPLSGVSDGIA-------------PVPAASGI-TKL 106 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170 ++ P D + G+ F GK G +LD +L+++ + +H + GN S Sbjct: 107 AVVSLCPPTEDMVYGQLFHGKAGVLLDNILKAVGLDAAYVHKTCWVKTAAVGNPMPSEAA 166 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230 + R+++ +LF+G F + Q + L + P Sbjct: 167 IANALEQTARELDGCRAPAVLFLG----QAFVKPERQAMIETL---------CAGRPFFI 213 Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALKN 260 HP L++ P +K W L LK+ L Sbjct: 214 IDHPARLLRQPELKARAWQTLKQLKRVLAQ 243 >gi|171320930|ref|ZP_02909924.1| Uracil-DNA glycosylase superfamily [Burkholderia ambifaria MEX-5] gi|171093795|gb|EDT38932.1| Uracil-DNA glycosylase superfamily [Burkholderia ambifaria MEX-5] Length = 171 Score = 93.7 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 30/137 (21%), Positives = 58/137 (42%), Gaps = 11/137 (8%) Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPGNRNLS 167 M++G P D ++ +G PF G G MLD+ L+ I R ++++ W P G R L Sbjct: 1 MLVGEQPGDQEDRTGIPFVGAAGRMLDRALEEAGIERASVYVTNAVKHFKWEPRGKRRLH 60 Query: 168 ----NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH 223 E+ CR + R++ + P++++ +G ++ + Sbjct: 61 KTPAQREVAACRYWLERELAALGPRVIVALGATALRAVLQDNDATLERTRQPVR----SP 116 Query: 224 SIIPTLATVHPQELIQY 240 +AT HP +++ Sbjct: 117 DGCLVVATYHPSYVLRT 133 >gi|42519381|ref|NP_965311.1| hypothetical protein LJ1509 [Lactobacillus johnsonii NCC 533] gi|41583669|gb|AAS09277.1| hypothetical protein LJ_1509 [Lactobacillus johnsonii NCC 533] Length = 212 Score = 93.3 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 59/189 (31%), Gaps = 31/189 (16%) Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160 LMI+G P + S PF G +G L K L SI + R ++I+ P Sbjct: 25 FGAGPVHPKLMIVGEAPGREEIESLIPFHGASGKELMKSLASIGLKRDDVYITSAVRSRP 84 Query: 161 PG-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 NR + E+ P + +I+ + PKI++ +G + Sbjct: 85 YSIKHTFSKKENKEVIKYPNRKPTKKEILAHAPFLDYEIKCVKPKIIVTVGTTALTRLLD 144 Query: 204 NDAQKTYQNLGKWSN-------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 D + GK + HP + + + Sbjct: 145 -DKYEISNVHGKIIENTPILELNDKKDGYIWSKEKYIVVPQYHPAAVFYNRKLAEVIAQD 203 Query: 251 LITLKKALK 259 + +K +K Sbjct: 204 WLNVKPLIK 212 >gi|227890246|ref|ZP_04008051.1| uracil-DNA glycosylase [Lactobacillus johnsonii ATCC 33200] gi|227849060|gb|EEJ59146.1| uracil-DNA glycosylase [Lactobacillus johnsonii ATCC 33200] Length = 212 Score = 93.3 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 59/189 (31%), Gaps = 31/189 (16%) Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160 LMI+G P + S PF G +G L K L SI + R ++I+ P Sbjct: 25 FGAGPVHPKLMIVGEAPGREEIESLIPFHGASGKELMKSLASIGLKREDVYITSAVRSRP 84 Query: 161 PG-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 NR + E+ P + +I+ + PKI++ +G + Sbjct: 85 YSIKHTFSKKENKEVINYPNRKPTKKEILAHAPFLDYEIKCVKPKIIVTVGTTALTRLLD 144 Query: 204 NDAQKTYQNLGKWSN-------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 D + GK + HP + + + Sbjct: 145 -DKYEISNVHGKIIENTPILELNDKKDGYIWSKEKYIVVPQYHPAAVFYNRKLAEVIAQD 203 Query: 251 LITLKKALK 259 + +K +K Sbjct: 204 WLNVKPLIK 212 >gi|255528586|ref|ZP_05395357.1| Uracil-DNA glycosylase superfamily [Clostridium carboxidivorans P7] gi|296188800|ref|ZP_06857180.1| uracil-DNA glycosylase, family 4 [Clostridium carboxidivorans P7] gi|255507721|gb|EET84190.1| Uracil-DNA glycosylase superfamily [Clostridium carboxidivorans P7] gi|296046609|gb|EFG86063.1| uracil-DNA glycosylase, family 4 [Clostridium carboxidivorans P7] Length = 196 Score = 93.3 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 69/196 (35%), Gaps = 18/196 (9%) Query: 80 LKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKM 139 LK ++ + + I +++ +G P ++ GKPF G G +K Sbjct: 5 LKQKIKQISENYTEEKIGGFIYGDGPIPCNILFVGEAPGKTEVEEGKPFVGVAGKNFEKH 64 Query: 140 LQSIEIMRTQIHISMISPWHPPG------------NRNLSNIEMEICRPIIMRQIELISP 187 L SI + R +HI+ + P NR E+ + R ++ +I L++P Sbjct: 65 LNSIGLSRKDVHITNTCFFRPIKIKESSSGRTTISNRPPKTSEVNLFREVLNEEINLVNP 124 Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIKK 245 KI++ +GN N + + G HP L + Sbjct: 125 KIIVTLGNVPLKRLTNFKS--IGECHGDL--YFNNELKRYVFPMYHPSALTYNRNEEFYS 180 Query: 246 NTWHALITLKKALKNL 261 LK+AL + Sbjct: 181 MYQEDWNKLKEALNKI 196 >gi|227544030|ref|ZP_03974079.1| uracil-DNA glycosylase [Lactobacillus reuteri CF48-3A] gi|300908295|ref|ZP_07125760.1| uracil-DNA glycosylase [Lactobacillus reuteri SD2112] gi|227185969|gb|EEI66040.1| uracil-DNA glycosylase [Lactobacillus reuteri CF48-3A] gi|300894542|gb|EFK87899.1| uracil-DNA glycosylase [Lactobacillus reuteri SD2112] Length = 217 Score = 93.3 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 30/194 (15%), Positives = 63/194 (32%), Gaps = 30/194 (15%) Query: 97 LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156 DLM++G P + PFSG +G L K+++SI R+ ++I+ + Sbjct: 23 TGFTPGQGPLNPDLMLVGEAPGRYEEKVNIPFSGASGQELMKLIESIGYSRSTVYITSVV 82 Query: 157 PWHPPGNRN-----------------LSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199 P + + E+ P+ ++ + PKI++ +GN Sbjct: 83 RQRPYSIKKAIDKKTGEVIEKRPNRTPTKKEVLAFAPLFDWELAQVKPKIIVTLGNTALQ 142 Query: 200 FFFNNDAQKTYQNLGKWS------------NLCTPHSIIPTLATVHPQELIQYPLIKKNT 247 + A + G+ + HP ++ ++ Sbjct: 143 RLLGSQA-NIGKLHGQLLHEKIQRTNDAHDGYELTTDKHWIMPMYHPAAVLYARRLEPTI 201 Query: 248 WHALITLKKALKNL 261 L + +K + Sbjct: 202 KADWQRLGQDIKKM 215 >gi|323490492|ref|ZP_08095698.1| uracil-DNA glycosylase family protein [Planococcus donghaensis MPA1U2] gi|323395758|gb|EGA88598.1| uracil-DNA glycosylase family protein [Planococcus donghaensis MPA1U2] Length = 214 Score = 93.3 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 68/188 (36%), Gaps = 29/188 (15%) Query: 99 TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158 + + E +M++G P +++ +G PF+G+ G L L+S+ ++R ++I+ Sbjct: 24 FVWGSGPENPAIMLVGEAPGENEIETGIPFTGRAGKELMASLESVGLVREDVYITSAVRS 83 Query: 159 HPPG----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202 P NR + E+ PI+ +I I P +++ +GN Sbjct: 84 RPYKWGTKKKRNGEVIERKYNRAPTKKEIIAHAPILDTEIRDIHPPLIVTLGNVGLQRLI 143 Query: 203 NNDAQKTYQNLGKWSN------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 A+ + G + T HP + P +++ Sbjct: 144 GPKAKV-TELHGLLIETPILYWDDVNNCFKETDEVYHIFPTFHPASVFYNPPVRELKDED 202 Query: 251 LITLKKAL 258 LK+ L Sbjct: 203 WRRLKELL 210 >gi|15677708|ref|NP_274869.1| putative DNA polymerase [Neisseria meningitidis MC58] gi|254804303|ref|YP_003082524.1| putative uracil-DNA glycosylase [Neisseria meningitidis alpha14] gi|7227131|gb|AAF42207.1| putative DNA polymerase, bacteriophage-type [Neisseria meningitidis MC58] gi|254667845|emb|CBA03868.1| putative uracil-DNA glycosylase [Neisseria meningitidis alpha14] gi|254672664|emb|CBA06503.1| bacteriophage-related DNA polymerase [Neisseria meningitidis alpha275] gi|316985486|gb|EFV64433.1| conserved hypothetical protein [Neisseria meningitidis H44/76] gi|325139532|gb|EGC62072.1| putative uracil-DNA glycosylase, family 4 [Neisseria meningitidis CU385] gi|325200930|gb|ADY96385.1| putative uracil-DNA glycosylase, family 4 [Neisseria meningitidis H44/76] Length = 245 Score = 92.9 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 90/271 (33%), Gaps = 41/271 (15%) Query: 1 MTSKRILSQEQILTIAL-FYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNI--- 56 M S R L + L + + + P N +Q + +++ +A + Sbjct: 1 MLSARYLHLHEALGLGPMWLKQA---AAVLPPKNTPAPSAQARPQTVRAAPIRPSQPHNG 57 Query: 57 -------RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD 109 + + + V + L L + + A Sbjct: 58 QARLETMKALETAAVPTRKPAPETETPLPGLSDGIA-------------PVPAASGI-TK 103 Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI 169 L ++ P D + G+ F GK G +LD +L+++ + +H + GN S Sbjct: 104 LAVVSLCPPIEDAVYGQLFHGKAGILLDNILKAVGLDAAYVHKTCWVKTAAVGNPMPSEQ 163 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 + I R+++ +LF+G F + Q + L P Sbjct: 164 AVANALGQIARELDGCRAPAVLFLG----QAFVQPERQTMIETL---------CGSRPFF 210 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 HP L++ P +K W L LK+AL+ Sbjct: 211 IIDHPARLLRQPELKARAWQVLKQLKRALRQ 241 >gi|298369745|ref|ZP_06981062.1| uracil-DNA glycosylase, family 4 [Neisseria sp. oral taxon 014 str. F0314] gi|298282302|gb|EFI23790.1| uracil-DNA glycosylase, family 4 [Neisseria sp. oral taxon 014 str. F0314] Length = 265 Score = 92.9 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 49/285 (17%), Positives = 93/285 (32%), Gaps = 49/285 (17%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPI------- 53 M S R L + L + + + VF P+ A +S+ + Sbjct: 1 MLSSRYLHLHEALGLGPMWLNK--DAVF-SPSETAPVKSKDAVPPAAAKPVAQAVQAAAS 57 Query: 54 -------------TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI 100 + + QA+ + A + E+++ + + + + Sbjct: 58 GRRARMAAMAAVGSQTEAPPAATPFQAEGPPETAP-VAEMRA-----KSVPPAAPTPAAV 111 Query: 101 CATQTEG-------QDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHIS 153 + ++M+I PS D ++G FSG G +LDKML ++ + Q + + Sbjct: 112 FSDGLPRIETSVRPSEIMVISICPSTEDCLAGHLFSGAAGVLLDKMLAAVGLQAHQAYKT 171 Query: 154 MISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL 213 P N + P + ++ K +LF+G + D + Sbjct: 172 SWIKTAPISGDRPDNARISGELPHVRTELAQSQAKAVLFLGQDFEKPELAKDMAQLC--- 228 Query: 214 GKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 +P HP L++ P K W L LK+ L Sbjct: 229 ----------GGLPFFVIPHPARLLRQPQFKARAWAELKKLKRLL 263 >gi|315646284|ref|ZP_07899404.1| Uracil-DNA glycosylase superfamily protein [Paenibacillus vortex V453] gi|315278483|gb|EFU41799.1| Uracil-DNA glycosylase superfamily protein [Paenibacillus vortex V453] Length = 220 Score = 92.9 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 63/198 (31%), Gaps = 36/198 (18%) Query: 96 SLSTI----CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH 151 + + T +M +G P + + G+PF G+ G ++ L+ + + R Q++ Sbjct: 22 AHQPVQGFLLGRGTSSAAVMFVGEAPGAHEVLEGRPFVGQAGQEMNAYLERLNLTREQVY 81 Query: 152 ISMISPWHPPG----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 I+ P NR + E+ P++ +I + PKI+ +GN Sbjct: 82 ITSAMRSRPYKEKVIVRASGENIISRSNRTPTKAEILAHAPLLDEEIRWVQPKIIAPMGN 141 Query: 196 KTKNFFFNNDAQKTYQNLGKWSN---------------LCTPHSIIPTLATVHPQELIQY 240 + + + GK HP ++ Sbjct: 142 TALHRLIGSH-ETVTSLHGKLIEGPVQQAISLEDASAGYRFSTETYMIFPLFHPAAVLYN 200 Query: 241 PLIKKNTWHALITLKKAL 258 + + L L + + Sbjct: 201 RKLSRLIESDLDILARMI 218 >gi|290559866|gb|EFD93189.1| uracil DNA glycosylase superfamily protein [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 97 Score = 92.5 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 44/91 (48%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L + + ++ C LC+ + + + ++++G P ++++ G+PF G +G Sbjct: 2 EELEAIANEIKRCTLCDLCNKRNNAVPGEGYDKARIVLLGEAPGKNEDLQGRPFIGMSGR 61 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRN 165 L K L+ + I R + I+ PP NRN Sbjct: 62 FLTKYLEKVGIKREAVFITNAVKCRPPNNRN 92 >gi|229016886|ref|ZP_04173814.1| Uracil-DNA glycosylase superfamily [Bacillus cereus AH1273] gi|229023092|ref|ZP_04179606.1| Uracil-DNA glycosylase superfamily [Bacillus cereus AH1272] gi|228738238|gb|EEL88720.1| Uracil-DNA glycosylase superfamily [Bacillus cereus AH1272] gi|228744447|gb|EEL94521.1| Uracil-DNA glycosylase superfamily [Bacillus cereus AH1273] Length = 216 Score = 92.5 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 65/186 (34%), Gaps = 30/186 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 LM++G P +++ +G PFSG+ G L + L+ I + R +++I+ P Sbjct: 29 GQGPRNPKLMLVGEAPGETEIHNGIPFSGRAGKHLMEFLERIHVTREEVYITSAVRSRPY 88 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++ELI P +++ +GN Sbjct: 89 KWREKRERNGEIIQKKYNRTPNQGEILAHAPLLDYELELIHPPVIVTLGNIALQRLVG-K 147 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + + + L Sbjct: 148 NNKITSVHGELLKQPVQQLKDSSGTEFIWTEKEYYIFPTFHPASIFYNRSLLELIYEDLE 207 Query: 253 TLKKAL 258 LK+ + Sbjct: 208 KLKRCI 213 >gi|330821073|ref|YP_004349935.1| phage SPO1 DNA polymerase-related protein [Burkholderia gladioli BSR3] gi|327373068|gb|AEA64423.1| phage SPO1 DNA polymerase-related protein [Burkholderia gladioli BSR3] Length = 215 Score = 92.5 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 75/193 (38%), Gaps = 18/193 (9%) Query: 55 NIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIG 114 + P A + +L + C L + + + +M++G Sbjct: 3 PSAVLAEPPGADALAGQDAPPTLD-------ACRRCPLWARATQPVDGRGPATAAIMLVG 55 Query: 115 YTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPGNRN----LS 167 P D D+ G PFSG G +L++ L+ + R ++++ + W G R + Sbjct: 56 EQPGDHDDRRGAPFSGTAGGILERALREASLARATVYLTHVVKHFKWEARGKRRLPVEPA 115 Query: 168 NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227 E+ CR + R+I+ ++P++++ +G ++ + S + Sbjct: 116 LEEVAACRYWLDREIDAVAPRVIVALGALAWRAVLDDPLARLPVAPLPVR----LPSGLQ 171 Query: 228 TLATVHPQELIQY 240 LAT HP +++ Sbjct: 172 LLATQHPDFVLRT 184 >gi|324325645|gb|ADY20905.1| uracil-DNA glycosylase family protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 213 Score = 92.5 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 66/185 (35%), Gaps = 30/185 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E +M++G P +++ +G PFSG+ G L L+ I + R +++I+ P Sbjct: 26 GQGPENPKIMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 85 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E ++PK+++ +GN Sbjct: 86 KWREKKERNGEIVQKKYNRTPNQGEILAHAPLLDYELEKLNPKLIVTLGNIGLQRLTG-K 144 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 +K G+ T HP + + + + L Sbjct: 145 GKKITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYHIFPTFHPASIFYNRSLLELIYEDLE 204 Query: 253 TLKKA 257 LK+ Sbjct: 205 KLKQY 209 >gi|257125890|ref|YP_003164004.1| phage SPO1 DNA polymerase-related protein [Leptotrichia buccalis C-1013-b] gi|257049829|gb|ACV39013.1| phage SPO1 DNA polymerase-related protein [Leptotrichia buccalis C-1013-b] Length = 177 Score = 92.5 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 74/183 (40%), Gaps = 8/183 (4%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 +LK + C L + I + D++ + + S+ ++ K + K Sbjct: 2 WDDLKLEIDMCAKCVLEKVRIKPIIGEGNKNADILFVLDSVSEEEDNKQKLLADKNSEYF 61 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 K L+ +I + + + ++ P GN + C ++ QI LI+PK ++ +G + Sbjct: 62 KKFLEYSKIDIEKCYFTTLTKCSPHGNLID-EDSILRCHEFLIAQIALINPKYIVTVGER 120 Query: 197 TKNFFFNNDAQKTYQNL-GKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 FF N ++ +NL G+ + + I + L + +K W LI + Sbjct: 121 ATRFFLQNMIKEDIRNLVGQMYDF---YGEIKIVPIYDISYLFKATDKEK--WK-LIKIL 174 Query: 256 KAL 258 + L Sbjct: 175 EKL 177 >gi|196234456|ref|ZP_03133282.1| Uracil-DNA glycosylase superfamily [Chthoniobacter flavus Ellin428] gi|196221512|gb|EDY16056.1| Uracil-DNA glycosylase superfamily [Chthoniobacter flavus Ellin428] Length = 159 Score = 92.1 bits (227), Expect = 6e-17, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 72/160 (45%), Gaps = 17/160 (10%) Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPG----NRNL 166 G P D ++ +G+PF G G +LD+ L+ I R + +++ W P G ++ Sbjct: 2 GEQPGDREDRAGRPFVGPAGKLLDRALEEAGIDRQETYVTNAVKHFKWEPRGKRRLHKKP 61 Query: 167 SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII 226 S+ ++ C+P + +++ I+P++L+ +G+ + + + + + + Sbjct: 62 SSRDIAACKPWLEAELQAIAPRVLVLLGSTAAQTILGSKVRV---LRDRGHAMPSEYCQ- 117 Query: 227 PTLATVHPQELIQYPLIK------KNTWHALITLKKALKN 260 T TVHP L++ P + L + + L++ Sbjct: 118 KTFVTVHPSSLLRAPDEESRDRNYAEFVADLKKVARLLRS 157 >gi|325133517|gb|EGC56180.1| putative uracil-DNA glycosylase, family 4 [Neisseria meningitidis M13399] Length = 245 Score = 92.1 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 90/269 (33%), Gaps = 37/269 (13%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITN----- 55 M S R L + L + + G V N AT R + + I+P Sbjct: 1 MLSARYLHLHEALGLGPMWLKRGA-AVLPPKNTPATPAQARPQTVRAAPIRPSQPHNGQA 59 Query: 56 ----IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLM 111 ++ + + V + L + + + A L Sbjct: 60 RLETMKALETAAVPTRKPAPETGTPLSGVSDGIA-------------PVPAASGI-TKLA 105 Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEM 171 ++ P D + G+ F GK G +LD +L+++ + +H + GN S + Sbjct: 106 VVSLCPPTEDMVYGQLFHGKAGVLLDNILKAVGLDAAYVHKTSWVKTAAVGNPMPSEQAI 165 Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231 I R+++ +LF+G F + Q + L P Sbjct: 166 ADALGQIARELDGCRAPAVLFLG----QAFVQPERQAMIETL---------CGSRPFFII 212 Query: 232 VHPQELIQYPLIKKNTWHALITLKKALKN 260 HP L++ P +K W L LK+AL+ Sbjct: 213 DHPARLLRQPELKARAWQVLKQLKRALRQ 241 >gi|168698542|ref|ZP_02730819.1| putative DNA polymerase related protein [Gemmata obscuriglobus UQM 2246] Length = 446 Score = 92.1 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 63/213 (29%), Gaps = 18/213 (8%) Query: 34 EATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLC 93 AT + S H+ A + A L L++ RS C C Sbjct: 222 WATLPEAAIIPDLLSEAGDRVAAMVAHAEGAGSAAAFMPAARDLDSLRAAARSCTACGRC 281 Query: 94 STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHIS 153 G ++++G P SG ++L L ++ + Sbjct: 282 GPGAPPAFGVGPGGARVVLVGDHPRA---------SGAADDLLAGALAEAGFDPAAVYRT 332 Query: 154 MISPWHPPGNRNLSNIEME----ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209 P + E CRP + ++ ++P +++ +G + Sbjct: 333 HAVK-RAPRPSPAAPREPHRGAGACRPWLTAELAALAPAVVVCLGPHAARAVLGP-LFRF 390 Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL 242 + G + +AT HP +++ P Sbjct: 391 AERRG---EPVAAGPVARAIATHHPSAVLRDPA 420 >gi|42780731|ref|NP_977978.1| uracil-DNA glycosylase family protein [Bacillus cereus ATCC 10987] gi|42736651|gb|AAS40586.1| uracil-DNA glycosylase family protein [Bacillus cereus ATCC 10987] Length = 213 Score = 92.1 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 30/185 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I + R +++I+ P Sbjct: 26 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTRDEVYITSAVRSRPY 85 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E I+PK+++ +GN D Sbjct: 86 KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKINPKLIVTLGNIGLQRLTGKD 145 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + + + L Sbjct: 146 K-KITDVHGQLFKQPIQKLKDMQSAEFTWSEKEYYIFPTFHPASIFYNRSLLELIYEDLE 204 Query: 253 TLKKA 257 LK+ Sbjct: 205 KLKRY 209 >gi|227511535|ref|ZP_03941584.1| uracil-DNA glycosylase [Lactobacillus buchneri ATCC 11577] gi|227523737|ref|ZP_03953786.1| uracil-DNA glycosylase [Lactobacillus hilgardii ATCC 8290] gi|227085180|gb|EEI20492.1| uracil-DNA glycosylase [Lactobacillus buchneri ATCC 11577] gi|227089052|gb|EEI24364.1| uracil-DNA glycosylase [Lactobacillus hilgardii ATCC 8290] Length = 211 Score = 92.1 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 21/183 (11%) Query: 99 TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158 + ++++G P D + G PF G +G LD+ L S+ + R I+I+ + Sbjct: 28 FVAGEGGYHPKVLLLGEAPGDKEVKLGHPFQGPSGKELDRWLASLGLTREDIYITGVVSA 87 Query: 159 HPPG--------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210 P +R +N E++ P+ ++ +++ +GN + N A K Sbjct: 88 RPFSIGKTGRKRDRRPNNTEVKQWAPMFDFEMTHFKDLLMIPMGNASLQRLLGNKA-KIG 146 Query: 211 QNLGKWSNLCTPH------------SIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 G+ + +I HP ++ +K LKK L Sbjct: 147 DLHGQLIEQPIQYLDKSTDTFKLTDNIRKIFPLYHPSYSKRFKNMKTVVDQDSANLKKLL 206 Query: 259 KNL 261 + Sbjct: 207 AQV 209 >gi|227508552|ref|ZP_03938601.1| uracil-DNA glycosylase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227191884|gb|EEI71951.1| uracil-DNA glycosylase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 211 Score = 92.1 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 21/183 (11%) Query: 99 TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158 + ++++G P D + G PF G +G LD+ L S+ + R I+I+ + Sbjct: 28 FVAGEGGYHPKVLLLGEAPGDKEVKLGHPFQGPSGKELDRWLASLGLTREDIYITGVVSA 87 Query: 159 HPPG--------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210 P +R +N E++ P+ ++ +++ +GN + N A K Sbjct: 88 RPFSIGKTGRKRDRRPNNTEVKQWAPMFDFEMTHFKDLLMIPMGNASLQRLLGNKA-KIG 146 Query: 211 QNLGKWSNLCTPH------------SIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 G+ + +I HP ++ +K LKK L Sbjct: 147 DLHGQLIEQPIQYLDKSTDTFKLTDNIRKIFPLYHPSYSKRFKNMKTVVDQDSANLKKLL 206 Query: 259 KNL 261 + Sbjct: 207 AQV 209 >gi|227515436|ref|ZP_03945485.1| uracil-DNA glycosylase [Lactobacillus fermentum ATCC 14931] gi|227086195|gb|EEI21507.1| uracil-DNA glycosylase [Lactobacillus fermentum ATCC 14931] Length = 223 Score = 92.1 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 66/191 (34%), Gaps = 30/191 (15%) Query: 99 TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158 + +M++G P S+ S PFSG +G L K+L+ I + R +HI+ + Sbjct: 28 FVPGAGPNHPAVMLVGEAPGRSETDSRVPFSGTSGKELIKLLEEIGLSRATVHITSVVRK 87 Query: 159 HPPG-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 P NR + E+ P+ +++ ++P++++ +GN + Sbjct: 88 RPYSVKVVTDKKTGQRVTKYPNRTPTKKEVLAFGPLFDWELKTVTPQVVVPLGNTSLQRL 147 Query: 202 FNNDAQKTYQNLGKWS------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249 +A K G+ + + HP + ++ Sbjct: 148 LGPEA-KIGDLHGQVLHQLVLETRPDHQGYQMGTTPYYIVPMYHPAAFLYARRLEPTVRA 206 Query: 250 ALITLKKALKN 260 K LK Sbjct: 207 DWQAFGKWLKE 217 >gi|229160579|ref|ZP_04288574.1| Uracil-DNA glycosylase superfamily [Bacillus cereus R309803] gi|228622989|gb|EEK79820.1| Uracil-DNA glycosylase superfamily [Bacillus cereus R309803] Length = 215 Score = 92.1 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 66/186 (35%), Gaps = 30/186 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I++ R +++I+ P Sbjct: 27 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMVFLERIQVTREEVYITSAVRSRPY 86 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E I PK+++ +GN + Sbjct: 87 KWREKKERNGEIIQKKYNRTPNQGEITAHAPLLDYELEQIKPKLIVTLGNIGLQRLTGKN 146 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K GK T HP + + + + L Sbjct: 147 K-KITDVHGKLLKQPIQKLKDMQSAEFTWSEKEYHIFPTFHPASIFYNRSLLELIYEDLE 205 Query: 253 TLKKAL 258 LK+ + Sbjct: 206 KLKQHI 211 >gi|259502467|ref|ZP_05745369.1| conserved hypothetical protein [Lactobacillus antri DSM 16041] gi|259169610|gb|EEW54105.1| conserved hypothetical protein [Lactobacillus antri DSM 16041] Length = 219 Score = 92.1 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 57/189 (30%), Gaps = 28/189 (14%) Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160 DLM++G P + PFSG +G L K+L SI R +I+ + P Sbjct: 27 PGQGPLHPDLMLVGEAPGRHEEQVNIPFSGASGQELMKLLNSIGYSRNNTYITSVVRQRP 86 Query: 161 PGNRN-----------------LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 + + E+ P+ ++ + P+I++ +GN Sbjct: 87 YSIKRVRDKKTGVLVEKRPNRTPTKKEVLAFAPLFDWELATVGPRIIVPLGNTALQRLLG 146 Query: 204 NDAQKTYQNLGKW-----------SNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 A + K + + HP ++ + Sbjct: 147 PSANIGDLHGQKLVQPIQQAASDGRGYQWSPNEYTLVPMYHPAAILYARRLLPTVQEDWQ 206 Query: 253 TLKKALKNL 261 L + + L Sbjct: 207 KLGRLVAAL 215 >gi|69249163|ref|ZP_00604885.1| Uracil-DNA glycosylase superfamily [Enterococcus faecium DO] gi|257879338|ref|ZP_05658991.1| uracil-DNA glycosylase [Enterococcus faecium 1,230,933] gi|257881846|ref|ZP_05661499.1| uracil-DNA glycosylase [Enterococcus faecium 1,231,502] gi|257890164|ref|ZP_05669817.1| uracil-DNA glycosylase [Enterococcus faecium 1,231,410] gi|257893492|ref|ZP_05673145.1| uracil-DNA glycosylase [Enterococcus faecium 1,231,408] gi|258615744|ref|ZP_05713514.1| DNA polymerase [Enterococcus faecium DO] gi|260558780|ref|ZP_05830969.1| uracil-DNA glycosylase superfamily [Enterococcus faecium C68] gi|293550595|ref|ZP_06673263.1| DNA polymerase [Enterococcus faecium E1039] gi|293559560|ref|ZP_06676094.1| DNA polymerase [Enterococcus faecium E1162] gi|293567555|ref|ZP_06678899.1| DNA polymerase [Enterococcus faecium E1071] gi|294621782|ref|ZP_06700942.1| DNA polymerase [Enterococcus faecium U0317] gi|314937900|ref|ZP_07845216.1| uracil-DNA glycosylase, family 4 [Enterococcus faecium TX0133a04] gi|314941391|ref|ZP_07848284.1| uracil-DNA glycosylase, family 4 [Enterococcus faecium TX0133C] gi|314948554|ref|ZP_07851934.1| uracil-DNA glycosylase, family 4 [Enterococcus faecium TX0082] gi|314951309|ref|ZP_07854363.1| uracil-DNA glycosylase, family 4 [Enterococcus faecium TX0133A] gi|314992860|ref|ZP_07858261.1| uracil-DNA glycosylase, family 4 [Enterococcus faecium TX0133B] gi|314998064|ref|ZP_07862952.1| uracil-DNA glycosylase, family 4 [Enterococcus faecium TX0133a01] gi|68194258|gb|EAN08778.1| Uracil-DNA glycosylase superfamily [Enterococcus faecium DO] gi|257813566|gb|EEV42324.1| uracil-DNA glycosylase [Enterococcus faecium 1,230,933] gi|257817504|gb|EEV44832.1| uracil-DNA glycosylase [Enterococcus faecium 1,231,502] gi|257826524|gb|EEV53150.1| uracil-DNA glycosylase [Enterococcus faecium 1,231,410] gi|257829871|gb|EEV56478.1| uracil-DNA glycosylase [Enterococcus faecium 1,231,408] gi|260075239|gb|EEW63552.1| uracil-DNA glycosylase superfamily [Enterococcus faecium C68] gi|291589656|gb|EFF21460.1| DNA polymerase [Enterococcus faecium E1071] gi|291598669|gb|EFF29726.1| DNA polymerase [Enterococcus faecium U0317] gi|291603216|gb|EFF33400.1| DNA polymerase [Enterococcus faecium E1039] gi|291606436|gb|EFF35836.1| DNA polymerase [Enterococcus faecium E1162] gi|313587906|gb|EFR66751.1| uracil-DNA glycosylase, family 4 [Enterococcus faecium TX0133a01] gi|313592664|gb|EFR71509.1| uracil-DNA glycosylase, family 4 [Enterococcus faecium TX0133B] gi|313596526|gb|EFR75371.1| uracil-DNA glycosylase, family 4 [Enterococcus faecium TX0133A] gi|313599814|gb|EFR78657.1| uracil-DNA glycosylase, family 4 [Enterococcus faecium TX0133C] gi|313642758|gb|EFS07338.1| uracil-DNA glycosylase, family 4 [Enterococcus faecium TX0133a04] gi|313645051|gb|EFS09631.1| uracil-DNA glycosylase, family 4 [Enterococcus faecium TX0082] Length = 213 Score = 92.1 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 56/188 (29%), Gaps = 30/188 (15%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 LM++G P ++ + PFSG+ G L + L S + R +++I+ P Sbjct: 26 GQGPLHPKLMLVGEAPGKTEIDTHVPFSGQAGKELMQALSSTGLTREEVYITSAVRSRPY 85 Query: 162 GNRN-----------------LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204 + + E+ PI+ ++ + PK++ +GN Sbjct: 86 RVTHRINKRTQQSETVYPNRTPTRSEVFAHAPILDYELMKVQPKLIATLGNIGLQRLLG- 144 Query: 205 DAQKTYQNLGKWSN------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 +N G+ L HP + + Sbjct: 145 KEYTVTKNHGQLYTGPVLQLTEQKDAYEWSEKNYRILPLFHPAAIFYNRSLVPVIHQDWQ 204 Query: 253 TLKKALKN 260 L L+ Sbjct: 205 VLASLLQQ 212 >gi|58616410|ref|YP_195540.1| N-terminus of phage DNA or Uracil-DNA glycosylase polymerase [Azoarcus sp. EbN1] gi|56315872|emb|CAI10516.1| probable N-terminus of phage DNA or Uracil-DNA glycosylase polymerase [Aromatoleum aromaticum EbN1] Length = 200 Score = 91.7 bits (226), Expect = 8e-17, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 63/161 (39%), Gaps = 8/161 (4%) Query: 86 SFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIE 144 C LC++ + +T L+ IG P + ++ G F+G+ G LD++L Sbjct: 3 ECIRCPALCASRSQIVMSTPAPLGGLLAIGEAPGEKEDEMGIGFTGQAGKTLDRLLAEHG 62 Query: 145 IMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204 I R + I PP NR + E++ C P + IE P++LL +G Sbjct: 63 IGREGYGRANICRCRPPENRKPTRAEVDACMPYLAEFIEQTRPRVLLLVGGTAAAHIVGT 122 Query: 205 DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK 245 + + S + P + HP ++ ++ Sbjct: 123 GSLA---RRIEMSRSPGGTWVDPAMC--HPA--LRSLAAQR 156 >gi|296161278|ref|ZP_06844086.1| Uracil-DNA glycosylase superfamily [Burkholderia sp. Ch1-1] gi|295888436|gb|EFG68246.1| Uracil-DNA glycosylase superfamily [Burkholderia sp. Ch1-1] Length = 504 Score = 91.7 bits (226), Expect = 8e-17, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 74/215 (34%), Gaps = 21/215 (9%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P A +R S + + + V L E L + C Sbjct: 274 PPLPAHLARERSRLGAQSGTVTVPEMPPVEYSAVTPP---------LREPTGPLATCRRC 324 Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150 L + + +M++G P + +N +G PF+G G++LD +L + R + Sbjct: 325 ALWRNAKQAVAGAGAAQAAIMVVGEQPGEDENQNGTPFTGPAGHLLDTVLARAGLERAAL 384 Query: 151 HISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 +++ + +R + E+E C+ + + ++P++++ +G Sbjct: 385 YLTYAVKHYKWETIEQQRVHRTPALREVEACQYWLEHEFAQVAPRVVVTLGATALKALTG 444 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238 + ++ HS + HP + Sbjct: 445 AHVNLS-----EYLGQTICHSGRLIVPAWHPSYAL 474 >gi|294011720|ref|YP_003545180.1| uracil-DNA glycosylase superfamily [Sphingobium japonicum UT26S] gi|292675050|dbj|BAI96568.1| uracil-DNA glycosylase superfamily [Sphingobium japonicum UT26S] Length = 234 Score = 91.7 bits (226), Expect = 9e-17, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 86/250 (34%), Gaps = 29/250 (11%) Query: 14 TIALFYADSGVYWVF-DEPNNEATY--ESQRKEKSIDSAIQPITNIRHIHSPLVQQADSI 70 +++ +GV +EP N +S R ++ + + S L A Sbjct: 11 AYMAWWSLAGVDCAMGEEPTNWLRPLQQSARIRAAVPEGGPAQPRPQSLESFLTWLAQDA 70 Query: 71 AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130 AQ + I LM+I P +D +G S Sbjct: 71 AQPERRWPG------------------AAIMPAGPVDAPLMVITDMPDPADIGAGTLLSD 112 Query: 131 KTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 + G + D ML++I + R +H++ + PPG ++ + + L +P+ L Sbjct: 113 RAGQLFDAMLRAIGLQRQDVHLASLFLSRPPGAMVEASDLSAAAARMRTY-VMLAAPRRL 171 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 L +G++T + +P AT HP+ L+ P K WH Sbjct: 172 LLLGDRTIRTLLPATDSGS-------RVFNHDGGTLPVFATFHPRLLLGQPAAKAECWHV 224 Query: 251 LITLKKALKN 260 L L + + Sbjct: 225 LQGLIEEMAK 234 >gi|268319242|ref|YP_003292898.1| hypothetical protein FI9785_757 [Lactobacillus johnsonii FI9785] gi|262397617|emb|CAX66631.1| hypothetical protein predicted by Glimmer/Critica [Lactobacillus johnsonii FI9785] Length = 212 Score = 91.7 bits (226), Expect = 9e-17, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 60/189 (31%), Gaps = 31/189 (16%) Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160 LMI+G P + S PF G +G L K L SI++ R ++I+ P Sbjct: 25 FGAGPVHPKLMIVGEAPGREEIESLIPFHGASGKELMKSLASIDLKREDVYITSAVRSRP 84 Query: 161 PG-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 NR + E+ P + +I+ + PKI++ +G + Sbjct: 85 YSIKHTFSKKENKEVIKYPNRKPTKKEILAHAPFLDYEIKCVKPKIIVTVGTTALTRLLD 144 Query: 204 NDAQKTYQNLGKWSN-------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 D + GK + HP + + + Sbjct: 145 -DKYEISNVHGKIIENTPILELNDKKDGYIWSKEKYIVVPQYHPAAVFYNRKLAEVIAQD 203 Query: 251 LITLKKALK 259 + +K +K Sbjct: 204 WLNVKPLIK 212 >gi|291006474|ref|ZP_06564447.1| DNA polymerase bacteriophage-type [Saccharopolyspora erythraea NRRL 2338] Length = 201 Score = 91.7 bits (226), Expect = 9e-17, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 43/126 (34%), Gaps = 8/126 (6%) Query: 65 QQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNIS 124 A+ L L+ R C L ++ T+ + ++ +G P D ++I Sbjct: 10 STAEPFVPSRGGLRALRDAARDCRGCDLYKSATQTVFGSGPSRARVLFVGEQPGDREDIE 69 Query: 125 GKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIM---RQ 181 G+PF G G +LD L I R +++ + E R Q Sbjct: 70 GEPFVGPAGGLLDLALAEAGIERDDAYLTNAVK-----HFKFVPQERGKRRIHRKPSTAQ 124 Query: 182 IELISP 187 + P Sbjct: 125 MRACRP 130 >gi|134100723|ref|YP_001106384.1| DNA polymerase bacteriophage-type [Saccharopolyspora erythraea NRRL 2338] gi|133913346|emb|CAM03459.1| DNA polymerase bacteriophage-type [Saccharopolyspora erythraea NRRL 2338] Length = 197 Score = 91.7 bits (226), Expect = 9e-17, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 43/126 (34%), Gaps = 8/126 (6%) Query: 65 QQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNIS 124 A+ L L+ R C L ++ T+ + ++ +G P D ++I Sbjct: 6 STAEPFVPSRGGLRALRDAARDCRGCDLYKSATQTVFGSGPSRARVLFVGEQPGDREDIE 65 Query: 125 GKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIM---RQ 181 G+PF G G +LD L I R +++ + E R Q Sbjct: 66 GEPFVGPAGGLLDLALAEAGIERDDAYLTNAVK-----HFKFVPQERGKRRIHRKPSTAQ 120 Query: 182 IELISP 187 + P Sbjct: 121 MRACRP 126 >gi|254670986|emb|CBA07715.1| bacteriophage-related DNA polymerase [Neisseria meningitidis alpha153] gi|325143767|gb|EGC66084.1| putative uracil-DNA glycosylase, family 4 [Neisseria meningitidis M01-240013] Length = 245 Score = 91.7 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 89/269 (33%), Gaps = 37/269 (13%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITN----- 55 M S R L + L + + V N AT R + + I+P Sbjct: 1 MLSARYLHLHEALGLGPMWLKQAA-AVLPPKNTPATPAQARPQTVRAAPIRPSQPHNGQA 59 Query: 56 ----IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLM 111 ++ + + V + L L + + A L Sbjct: 60 RLETMKALETAAVPTRKPAPETETPLPGLSDGIA-------------PVPAASGI-TKLA 105 Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEM 171 ++ P D + G+ F GK G +LD +L+++ + +H + GN S + Sbjct: 106 VVSLCPPIEDAVYGQLFHGKAGVLLDNILKAVGLDAAYVHKTSWVKTAAVGNPMPSEQAV 165 Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231 I R+++ +LF+G F + Q + L P Sbjct: 166 ANALGQIARELDGCRAPAVLFLG----QAFVQPERQTMIETL---------CGSRPFFII 212 Query: 232 VHPQELIQYPLIKKNTWHALITLKKALKN 260 HP L++ P +K W L LK+AL+ Sbjct: 213 DHPARLLRQPELKARAWQVLKQLKRALRQ 241 >gi|260662708|ref|ZP_05863602.1| uracil-DNA glycosylase superfamily protein [Lactobacillus fermentum 28-3-CHN] gi|260552789|gb|EEX25788.1| uracil-DNA glycosylase superfamily protein [Lactobacillus fermentum 28-3-CHN] Length = 220 Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 66/191 (34%), Gaps = 30/191 (15%) Query: 99 TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158 + +M++G P S+ S PFSG +G L K+L+ I + R +HI+ + Sbjct: 25 FVPGAGPNHPAVMLVGEAPGRSETDSRVPFSGTSGKELIKLLEEIGLSRATVHITSVVRK 84 Query: 159 HPPG-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 P NR + E+ P+ +++ ++P++++ +GN + Sbjct: 85 RPYSVKVVTDKKTGQRVTKYPNRTPTKKEVLAFGPLFDWELKAVAPQVIVPLGNTSLQRL 144 Query: 202 FNNDAQKTYQNLGKWS------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249 +A K G+ + + HP + ++ Sbjct: 145 LGPEA-KIGDLHGQVLHQSVLETRPDHQGYQMGTTPYYIVPMYHPAAFLYARRLEPTVRA 203 Query: 250 ALITLKKALKN 260 K LK Sbjct: 204 DWQAFGKWLKE 214 >gi|229058265|ref|ZP_04196653.1| Uracil-DNA glycosylase superfamily [Bacillus cereus AH603] gi|228720129|gb|EEL71713.1| Uracil-DNA glycosylase superfamily [Bacillus cereus AH603] Length = 216 Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 64/186 (34%), Gaps = 30/186 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 + LM++G P +++ +G PFSG+ G L + L+ I + R +++I+ P Sbjct: 29 GQGPKNPKLMLVGEAPGETEIHNGIPFSGRAGKHLMEFLERIHVTREEVYITSAVRSRPY 88 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E I +++ +GN Sbjct: 89 KWREKRERNGEIIQKKYNRTPNQGEILAHAPLLDYELEFIQQPVIVTLGNIALQRLVG-K 147 Query: 206 AQKTYQNLGKW-------------SNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + + + L Sbjct: 148 NNKITDVHGELLKQPVQRLKDSSSIEFIWSEKEYNIFPTFHPASIFYNRSLLELIYEDLE 207 Query: 253 TLKKAL 258 LK+ + Sbjct: 208 KLKRFI 213 >gi|319796425|ref|YP_004158065.1| uraciL-DNA glycosylase superfamily [Variovorax paradoxus EPS] gi|315598888|gb|ADU39954.1| Uracil-DNA glycosylase superfamily [Variovorax paradoxus EPS] Length = 266 Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 63/167 (37%), Gaps = 7/167 (4%) Query: 90 CHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQ 149 C L + + + +++ P ++D G+PFSG G +LD ML+++++ + Sbjct: 99 CRLYADAAEAPAS---PQGGWLVVADMPPEADGRHGEPFSGDAGRLLDNMLRALKLHDGK 155 Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209 + ++ G ++P ++L +G Sbjct: 156 TPVHLMRTHR--GVAAGQPGSPRQMDEAFAEHAAALAPSVVLAMGPLAAQSLMQ-SGDPL 212 Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 + G+ L + + +P +AT HP L++ P K W L + Sbjct: 213 GKLRGRAVPLASIN-GVPVVATYHPAYLLRNPADKARAWADLCLAAE 258 >gi|261378205|ref|ZP_05982778.1| uracil-DNA glycosylase, family 4 [Neisseria cinerea ATCC 14685] gi|269145676|gb|EEZ72094.1| uracil-DNA glycosylase, family 4 [Neisseria cinerea ATCC 14685] Length = 246 Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 88/270 (32%), Gaps = 37/270 (13%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDE----------PNNEATYESQRKEKSIDSAI 50 M S R L + L + + G + P + ++ + Sbjct: 1 MLSARYLHLHEALGLGPMWLKRGAVVLPSATLPGSQTQIRPQKQTVLSIPQRPSEQHTGQ 60 Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 + ++ + + V + + L + + + A L Sbjct: 61 ARLKTMKVLETTAVHTRKPVPETETPLSGVSDGIA-------------PVPAASGI-TKL 106 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170 ++ P D + G+ F GK G +LD +L+++ + +H + GN S Sbjct: 107 AVVSLCPPTEDMVYGQLFHGKAGVLLDNILKAVGLDAAYVHKTSWVKTAAVGNPMPSEQA 166 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230 + I R+++ +LF+G F + Q + L P Sbjct: 167 IANALGQIARELDGCRAPAVLFLG----QAFVQPERQTMIETL---------CGSRPFFI 213 Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALKN 260 HP L++ P +K W L LK+AL+ Sbjct: 214 IDHPARLLRQPELKARNWQVLKQLKRALQA 243 >gi|229132438|ref|ZP_04261292.1| Uracil-DNA glycosylase superfamily [Bacillus cereus BDRD-ST196] gi|228651144|gb|EEL07125.1| Uracil-DNA glycosylase superfamily [Bacillus cereus BDRD-ST196] Length = 216 Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 64/186 (34%), Gaps = 30/186 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 + LM++G P +++ +G PFSG+ G L + L+ I + R +++I+ P Sbjct: 29 GQGPKNPKLMLVGEAPGETEIHNGIPFSGRAGKHLMEFLERIHVTREEVYITSAVRSRPY 88 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E I +++ +GN Sbjct: 89 KWREKRELNGEIIQKKYNRTPNQGEILAHAPLLDYELEFIQQPVIVTLGNIALQRLVG-K 147 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + + + L Sbjct: 148 NNKITDVHGELLKQPVQRLKDSSSTEFIWSEKEYHIFPTFHPASIFYNRSLLELIYEDLE 207 Query: 253 TLKKAL 258 LK+ + Sbjct: 208 KLKRFI 213 >gi|229010938|ref|ZP_04168134.1| Uracil-DNA glycosylase superfamily [Bacillus mycoides DSM 2048] gi|229166476|ref|ZP_04294232.1| Uracil-DNA glycosylase superfamily [Bacillus cereus AH621] gi|228617050|gb|EEK74119.1| Uracil-DNA glycosylase superfamily [Bacillus cereus AH621] gi|228750338|gb|EEM00168.1| Uracil-DNA glycosylase superfamily [Bacillus mycoides DSM 2048] Length = 216 Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 64/186 (34%), Gaps = 30/186 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 + LM++G P +++ +G PFSG+ G L + L+ I + R +++I+ P Sbjct: 29 GQGPKNPKLMLVGEAPGETEIHNGIPFSGRAGKHLMEFLERIHVTREEVYITSAVRSRPY 88 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E I +++ +GN Sbjct: 89 KWREKRERNGEIIQKKYNRTPNQGEILAHAPLLDYELEFIQQPVIVTLGNIALQRLVG-K 147 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + + + L Sbjct: 148 NNKITDVHGELLKQPVQRLKDSSSTEFIWSEKEYHIFPTFHPASIFYNRSLLELIYEDLE 207 Query: 253 TLKKAL 258 LK+ + Sbjct: 208 KLKRFI 213 >gi|163939446|ref|YP_001644330.1| uracil-DNA glycosylase superfamily protein [Bacillus weihenstephanensis KBAB4] gi|163861643|gb|ABY42702.1| Uracil-DNA glycosylase superfamily [Bacillus weihenstephanensis KBAB4] Length = 216 Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 64/186 (34%), Gaps = 30/186 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 + LM++G P +++ +G PFSG+ G L + L+ I + R +++I+ P Sbjct: 29 GQGPKNPKLMLVGEAPGETEIHNGIPFSGRAGKHLMEFLERIHVTREEVYITSAVRSRPY 88 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E I +++ +GN Sbjct: 89 KWREKRERNGEIIQKKYNRTPNQGEILAHAPLLDYELEFIQQPVIVTLGNIALQRLVG-K 147 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + + + L Sbjct: 148 NNKITDVHGELLKQPVQRLKDSSSTEFIWSEKEYHIFPTFHPASIFYNRSLLELIYEDLE 207 Query: 253 TLKKAL 258 LK+ + Sbjct: 208 KLKRFI 213 >gi|229115076|ref|ZP_04244486.1| Uracil-DNA glycosylase superfamily [Bacillus cereus Rock1-3] gi|228668216|gb|EEL23648.1| Uracil-DNA glycosylase superfamily [Bacillus cereus Rock1-3] Length = 213 Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 62/185 (33%), Gaps = 30/185 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 +M++G P +++ +G PFSG+ G L + L+ I + R +++I+ P Sbjct: 26 GQGPGNPKIMLVGEAPGETEIHNGIPFSGRAGKHLMEFLERIHVTREEVYITSAVRSRPY 85 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E I P +++ +GN Sbjct: 86 KWREKKERNGEKIQKKYNRTPNQGEILAHAPLLDYELEHIDPPVIVTLGNIALQRLVG-K 144 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + + + Sbjct: 145 NHKITDVHGELLKQPVQQLKDSCCTEFVWTEKEYSIFPTFHPASIFYNRSLLELIYEDWE 204 Query: 253 TLKKA 257 LKK Sbjct: 205 KLKKY 209 >gi|229096120|ref|ZP_04227093.1| Uracil-DNA glycosylase superfamily [Bacillus cereus Rock3-29] gi|228687080|gb|EEL40985.1| Uracil-DNA glycosylase superfamily [Bacillus cereus Rock3-29] Length = 213 Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 62/185 (33%), Gaps = 30/185 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 +M++G P +++ +G PFSG+ G L + L+ I + R +++I+ P Sbjct: 26 GQGPGNPKIMLVGEAPGETEIHNGIPFSGRAGKHLMEFLERIHVTREEVYITSAVRSRPY 85 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E I P +++ +GN Sbjct: 86 KWREKKERNGEKIQKKYNRTPNQGEILAHAPLLDYELEHIDPPVIVTLGNIALQRLVG-K 144 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + + + Sbjct: 145 NHKITDVHGELLKQPVQQLKDSCCTEFVWTEKEYSIFPTFHPASIFYNRSLLELIYEDWE 204 Query: 253 TLKKA 257 LK+ Sbjct: 205 KLKRY 209 >gi|229102232|ref|ZP_04232941.1| Uracil-DNA glycosylase superfamily [Bacillus cereus Rock3-28] gi|228681133|gb|EEL35301.1| Uracil-DNA glycosylase superfamily [Bacillus cereus Rock3-28] Length = 213 Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 62/185 (33%), Gaps = 30/185 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 +M++G P +++ +G PFSG+ G L + L+ I + R +++I+ P Sbjct: 26 GQGPGNPKIMLVGEAPGETEIHNGIPFSGRAGKHLMEFLERIHVTREEVYITSAVRSRPY 85 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E I P +++ +GN Sbjct: 86 KWREKKERNGEKIQKKYNRTPNQGEILAHAPLLDYELEHIDPPVIVTLGNIALQRLVG-K 144 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + + + Sbjct: 145 NHKITDVHGELLKQPVQQLKDSCCTEFVWTEKEYSIFPTFHPASIFYNRSLLELIYEDWE 204 Query: 253 TLKKA 257 LK+ Sbjct: 205 KLKRY 209 >gi|327183800|gb|AEA32247.1| Uracil-DNA glycosylase family protein [Lactobacillus amylovorus GRL 1118] Length = 215 Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 60/189 (31%), Gaps = 31/189 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 + + LMIIG P ++ ++ PFSG G L+K L I + R ++I+ P Sbjct: 26 GSGPKHPKLMIIGEAPGRNEIVNNIPFSGDAGKELNKSLAQIGLTRDDVYITSAVRSRPY 85 Query: 162 G-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204 NR + E+ P + +I+ PK+++ +GN Sbjct: 86 AIKKVFSKRENKEVTKYPNRKPTKKEVLAHAPFLDYEIDYAQPKLIVALGNTGLERLLGP 145 Query: 205 DAQKTYQNLGKWSN-------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 K + GK HP + + + Sbjct: 146 -GHKISEEHGKVIENTPILRLNPQKDGYVWSKQKYTIFPEYHPAAVFYNRKLSDDIIKDW 204 Query: 252 ITLKKALKN 260 +K L+ Sbjct: 205 NIIKPYLEK 213 >gi|315038595|ref|YP_004032163.1| Uracil-DNA glycosylase family protein [Lactobacillus amylovorus GRL 1112] gi|312276728|gb|ADQ59368.1| Uracil-DNA glycosylase family protein [Lactobacillus amylovorus GRL 1112] Length = 215 Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 60/189 (31%), Gaps = 31/189 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 + + LMIIG P ++ ++ PFSG G L+K L I + R ++I+ P Sbjct: 26 GSGPKHPKLMIIGEAPGRNEIVNNIPFSGDAGKELNKSLAQIGLTRDDVYITSAVRSRPY 85 Query: 162 G-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204 NR + E+ P + +I+ PK+++ +GN Sbjct: 86 AIKKVFSKRQNKEVTKYPNRKPTKKEVLAHAPFLDYEIDYAQPKLIVALGNTGLERLLGP 145 Query: 205 DAQKTYQNLGKWSN-------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 K + GK HP + + + Sbjct: 146 -GHKISEEHGKVIENTPILRLNPQKDGYVWSKQKYTIFPEYHPAAVFYNRKLSDDIIKDW 204 Query: 252 ITLKKALKN 260 +K L+ Sbjct: 205 NIIKPYLEK 213 >gi|261405902|ref|YP_003242143.1| uracil-DNA glycosylase superfamily protein [Paenibacillus sp. Y412MC10] gi|261282365|gb|ACX64336.1| Uracil-DNA glycosylase superfamily [Paenibacillus sp. Y412MC10] Length = 220 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 63/208 (30%), Gaps = 32/208 (15%) Query: 82 SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 + + + + +M IG P + + GKPF G+ G ++ L+ Sbjct: 12 ATIAICRARLVHQPVEGFLLGRGVRFAKIMFIGEAPGAHEVLEGKPFVGQAGQEMNAYLE 71 Query: 142 SIEIMRTQIHISMISPWHPPG----------------NRNLSNIEMEICRPIIMRQIELI 185 +++ R Q++I+ P NR + E+ P++ +I + Sbjct: 72 RLKLTRDQVYITSSMRSRPYKDKVLVRPSGENVISRSNRTPTKAEILAHAPLLDEEIRWV 131 Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN---------------LCTPHSIIPTLA 230 P IL +GN + + + GK Sbjct: 132 RPDILAPMGNTALHRLIGSH-ETVTSLHGKLMEGPVQQAADPENPGAGYVFSPETYKIFP 190 Query: 231 TVHPQELIQYPLIKKNTWHALITLKKAL 258 HP ++ + L L + L Sbjct: 191 LFHPAAVLYNRKLSTLIEDDLDILARIL 218 >gi|184156039|ref|YP_001844379.1| hypothetical protein LAF_1563 [Lactobacillus fermentum IFO 3956] gi|183227383|dbj|BAG27899.1| hypothetical phage protein [Lactobacillus fermentum IFO 3956] Length = 220 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 66/191 (34%), Gaps = 30/191 (15%) Query: 99 TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158 + +M++G P S+ S PFSG +G L K+L+ I + R +HI+ + Sbjct: 25 FVPGAGPNHPAVMLVGEAPGRSETDSQVPFSGTSGKELIKLLEEIGLSRATVHITSVVCK 84 Query: 159 HPPG-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 P NR + E+ P+ +++ ++P++++ +GN + Sbjct: 85 RPYSVKVVTNKKTGQRVTKYPNRTPTKKEVLAFGPLFDWELKTVAPQVVVPLGNTSLQRL 144 Query: 202 FNNDAQKTYQNLGKWS------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249 +A K G+ + + HP + ++ Sbjct: 145 LGPEA-KIGDLHGQVLHQSVLETRPDHQGYQMGTTPYYIVPMYHPAAFLYARRLEPTVRA 203 Query: 250 ALITLKKALKN 260 K LK Sbjct: 204 DWQAFGKWLKE 214 >gi|261207375|ref|ZP_05922062.1| uracil-DNA glycosylase superfamily [Enterococcus faecium TC 6] gi|289566789|ref|ZP_06447201.1| uracil-DNA glycosylase superfamily [Enterococcus faecium D344SRF] gi|294614742|ref|ZP_06694644.1| DNA polymerase [Enterococcus faecium E1636] gi|294619306|ref|ZP_06698775.1| DNA polymerase [Enterococcus faecium E1679] gi|260078435|gb|EEW66139.1| uracil-DNA glycosylase superfamily [Enterococcus faecium TC 6] gi|289161416|gb|EFD09304.1| uracil-DNA glycosylase superfamily [Enterococcus faecium D344SRF] gi|291592480|gb|EFF24087.1| DNA polymerase [Enterococcus faecium E1636] gi|291594466|gb|EFF25874.1| DNA polymerase [Enterococcus faecium E1679] Length = 213 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 57/188 (30%), Gaps = 30/188 (15%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 LM++G P ++ + PFSG+ G L + L S + R +++I+ P Sbjct: 26 GQGPLHPKLMLVGEAPGKTEIDTHVPFSGQAGKELMQALSSTGLTREEVYITSAIRSRPY 85 Query: 162 GNRN-----------------LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204 + + E+ PI+ +I+ + P+++ +GN Sbjct: 86 RVTHRINKRTKQQEIVYPNRTPTKAEVLAHAPILDYEIKQVQPQLIATLGNIGLQRLLG- 144 Query: 205 DAQKTYQNLGKWSN------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 +N G+ L HP + + Sbjct: 145 KEYTVTKNHGQLYTGPVLQLTEQKDAYEWSEKNYRILPLFHPAAIFYNRSLVPVIHQDWQ 204 Query: 253 TLKKALKN 260 L L+ Sbjct: 205 VLASLLQQ 212 >gi|94271666|ref|ZP_01291994.1| DNA polymerase bacteriophage-type [delta proteobacterium MLMS-1] gi|93450382|gb|EAT01594.1| DNA polymerase bacteriophage-type [delta proteobacterium MLMS-1] Length = 125 Score = 91.0 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 5/127 (3%) Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192 G +LDKML +I + R+ ++++ + PP R + E CRP ++ QI I P +L Sbjct: 1 GALLDKMLAAIGLARSTVYLTTVVKCAPPDCRPPTPEESRQCRPWLLEQIAAIRPTLLCT 60 Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 +G + + Q G++ + I + T+ P L+ P +KK WH L Sbjct: 61 MGQEAAQSLLKSSRNL-LQLRGRFHD----CQGIALMPTLAPDFLLPNPEMKKAAWHDLQ 115 Query: 253 TLKKALK 259 + K L Sbjct: 116 LIAKRLA 122 >gi|325127509|gb|EGC50436.1| putative uracil-DNA glycosylase, family 4 [Neisseria meningitidis N1568] Length = 245 Score = 91.0 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 50/270 (18%), Positives = 93/270 (34%), Gaps = 39/270 (14%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNI---- 56 M S R L + L + + V P N +Q + +++ +A + Sbjct: 1 MLSARYLHLHEALGLGPMWLKQ--TAVVLPPKNTPAPSAQARPQTVRAAPIRPSQPHNGQ 58 Query: 57 ------RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 + + + V + L L + + A L Sbjct: 59 ARLETMKALETAAVHTRKPAPETETPLPGLSDGIA-------------PVPAASGI-TKL 104 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170 ++ P D + G+ F GK G +LD +L+++ + +H + GN S Sbjct: 105 AVVSLCPPIEDAVYGQLFHGKAGVLLDNILKAVGLDAAYVHKTCWVKTAAVGNPMPSEAA 164 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230 +E +M++++ +LF+G F N + Q + L P Sbjct: 165 IETATVSVMQELDGCRAPAVLFLG----QAFVNPERQAMIETL---------CGSRPFFI 211 Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALKN 260 HP L++ P +K W L LK+AL+ Sbjct: 212 IDHPARLLRQPELKARAWQVLKQLKRALRQ 241 >gi|228907261|ref|ZP_04071121.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis IBL 200] gi|228852401|gb|EEM97195.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis IBL 200] Length = 216 Score = 91.0 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 66/184 (35%), Gaps = 30/184 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I + R +++I+ P Sbjct: 29 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 88 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E I+PK+++ +GN + Sbjct: 89 KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKINPKLIVTLGNIGLQRLIGKN 148 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ + T HP + + + + L Sbjct: 149 K-KITDVHGQLLKQPIQKLKDMQSAEFIWSENEYHVFPTFHPASIFYNRSLLELIYEDLE 207 Query: 253 TLKK 256 LK+ Sbjct: 208 KLKR 211 >gi|329926821|ref|ZP_08281226.1| uracil-DNA glycosylase, family 4 [Paenibacillus sp. HGF5] gi|328938913|gb|EGG35284.1| uracil-DNA glycosylase, family 4 [Paenibacillus sp. HGF5] Length = 220 Score = 91.0 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 63/208 (30%), Gaps = 32/208 (15%) Query: 82 SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 + + + + +M IG P + + GKPF G+ G ++ L+ Sbjct: 12 ATIAICRARLVHQPVEGFLLGRGVRFAKIMFIGEAPGAHEVLEGKPFVGQAGQEMNAYLE 71 Query: 142 SIEIMRTQIHISMISPWHPPG----------------NRNLSNIEMEICRPIIMRQIELI 185 +++ R Q++I+ P NR + E+ P++ +I + Sbjct: 72 RLKLTRDQVYITSAMRSRPYKDKVLVRPSGENVISRSNRTPTKAEILAHAPLLDEEIRWV 131 Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN---------------LCTPHSIIPTLA 230 P IL +GN + + + GK Sbjct: 132 RPDILAPMGNTALHRLIGSH-ETVTSLHGKLMEGPVQQAADPENPGAGYVFSPETYKIFP 190 Query: 231 TVHPQELIQYPLIKKNTWHALITLKKAL 258 HP ++ + L L + L Sbjct: 191 LFHPAAVLYNRKLSTLIEDDLDILARIL 218 >gi|152975053|ref|YP_001374570.1| uracil-DNA glycosylase superfamily protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023805|gb|ABS21575.1| Uracil-DNA glycosylase superfamily [Bacillus cytotoxicus NVH 391-98] Length = 212 Score = 91.0 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 63/186 (33%), Gaps = 30/186 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 + M++G P +++ +G PFSG+ G L + L + I R +++I+ P Sbjct: 26 GQGPKNPKFMLVGEAPGETEIHNGIPFSGRAGKYLMEFLNYLHITREEVYITSAVRSRPY 85 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E I P++++ +GN D Sbjct: 86 KWKEKKEKSGEVIQKKYNRTPNQREIVAHAPLLDYELEQIKPRMIVTLGNIGLQRLVGRD 145 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K GK HP + + + L Sbjct: 146 K-KITDVHGKLLKQSVRKLKDINSSEFIWTKKEYYIFPIFHPASIFYNRSLLDFIYEDLE 204 Query: 253 TLKKAL 258 LK+ + Sbjct: 205 KLKEYI 210 >gi|331700790|ref|YP_004397749.1| Uracil-DNA glycosylase superfamily [Lactobacillus buchneri NRRL B-30929] gi|329128133|gb|AEB72686.1| Uracil-DNA glycosylase superfamily [Lactobacillus buchneri NRRL B-30929] Length = 213 Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 62/182 (34%), Gaps = 21/182 (11%) Query: 99 TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158 + + ++++G P D + G+PF G +G LD+ L S+ + R I+I+ + Sbjct: 28 FVPSEGGLHPRILLLGEAPGDKEVKIGRPFMGPSGKELDRWLASLGLTREDIYITGVVNS 87 Query: 159 HPP--------GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210 P +R + E++ + ++ +L+ +GN + A K Sbjct: 88 RPFSIGKTGRKSDRRPNQKEVKRSAAMFDWELSHFPDVLLVPMGNASLQRLLGTKA-KIG 146 Query: 211 QNLGKWSN------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 G+ HP ++ +K LK+ L Sbjct: 147 DLHGQLLERSIQKYNQQTDSFELSKEKHQIFPLYHPSYSKRFKNMKPVVDADSQKLKQLL 206 Query: 259 KN 260 + Sbjct: 207 EQ 208 >gi|309379489|emb|CBX21855.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 244 Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 92/269 (34%), Gaps = 37/269 (13%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITN----- 55 M S R L + L + + G V N AT R + + I+P Sbjct: 1 MLSARYLHLHEALGLGPMWLKRGA-VVLPPKNTPATSVQARPQTVRSAPIRPSQPHNVQA 59 Query: 56 ----IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLM 111 ++ + + V + + L + + + A L Sbjct: 60 RLETMKALETAAVPTRKPVPETETPLPGVSDGIA-------------PVPAASGI-TRLA 105 Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEM 171 ++ P D + G+ F GK G +LD +L+++ + +H + GN S + Sbjct: 106 VVSLCPPIEDAVYGQLFHGKAGILLDNILKAVGLDAAYVHKTCWVKTAAVGNPMPSEQAI 165 Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231 E I+R+++ +LF+G F + Q + L P Sbjct: 166 ENALGQIIRELDGCRAPAVLFLG----QAFVQPERQAMIETL---------CGSRPFFII 212 Query: 232 VHPQELIQYPLIKKNTWHALITLKKALKN 260 HP L++ P +K W L LK AL+ Sbjct: 213 DHPARLLRQPELKARAWQVLKQLKHALQA 241 >gi|87199797|ref|YP_497054.1| hypothetical protein Saro_1780 [Novosphingobium aromaticivorans DSM 12444] gi|87135478|gb|ABD26220.1| hypothetical protein Saro_1780 [Novosphingobium aromaticivorans DSM 12444] Length = 258 Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 88/241 (36%), Gaps = 9/241 (3%) Query: 10 EQILTIALFYADSGVY-WVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQAD 68 + + ++ D+GV DEP + + +P+ + Sbjct: 14 DALAAALDWWRDAGVDGTFVDEPQDWLAAARLAAAAQAPTPQKPLRELIAERDDSPP-PP 72 Query: 69 SIAQKACSLHELKSLLRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127 +++ ++ EL + + L L + G LMI+ PS D + Sbjct: 73 TVSDRSGWPTELAAFADWWLAEPVLAPAGLRRLVPAGPAGAKLMIVVPMPSADDGDT--L 130 Query: 128 FSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP 187 SG+ G +LD ML ++ + R + +I+ P H P + + +++ I L++P Sbjct: 131 LSGRAGRLLDAMLAAMGLERGETYIASAIPAHVPMPD-WAALRQAGIGDVLLHHIALVAP 189 Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247 LL +G + + ND + S+I L + ++ P +K Sbjct: 190 DRLLILGATSISTLLGNDPPNLAH---SLQAINQNPSVIAALPAWDLEAMLARPALKAGF 246 Query: 248 W 248 W Sbjct: 247 W 247 >gi|261364810|ref|ZP_05977693.1| uracil-DNA glycosylase, family 4 [Neisseria mucosa ATCC 25996] gi|288566841|gb|EFC88401.1| uracil-DNA glycosylase, family 4 [Neisseria mucosa ATCC 25996] Length = 279 Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 44/220 (20%), Positives = 77/220 (35%), Gaps = 21/220 (9%) Query: 39 SQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLS 98 +R+ S +A AD + + +L + D S ++ Sbjct: 81 PEREMPSQQTAAVEAARQSEAKPKQETPADKQTRSIQNTADLPAAPHHSDDLPRLSATVK 140 Query: 99 TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158 T LM++ PS D + G+ F G+TG +LD ML +I + Q H + Sbjct: 141 TAH--------LMVVSICPSTEDTLHGELFHGETGVLLDNMLAAIRLSPQQAHKTSWVKA 192 Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218 P + + S ++ P + ++E + +LF+G + + G Sbjct: 193 APVFSPHPSEAQIHAELPALKHELESSQARAVLFLGQVFEQ---KEMMAVMDELCG---- 245 Query: 219 LCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 IP HP L++ P +K W L L Sbjct: 246 ------GIPYFTIPHPARLLRQPRLKAYAWQVLKKAAAVL 279 >gi|308389972|gb|ADO32292.1| putative DNA polymerase [Neisseria meningitidis alpha710] Length = 245 Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 89/269 (33%), Gaps = 37/269 (13%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITN----- 55 M S R L + L + + V N AT R + + I+P Sbjct: 1 MLSARYLHLHEALGLGPMWLKQAA-AVLPPKNTPATPAQARPQTVRAAPIRPSQPHNGQA 59 Query: 56 ----IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLM 111 ++ + + V + L L + + A L Sbjct: 60 RLETMKALETAAVPTRKPAPETETPLPGLSDGIA-------------PVPAASGI-TKLA 105 Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEM 171 ++ P D + G+ F GK G +LD +L+++ + +H + G+ S + Sbjct: 106 VVSLCPPIEDAVYGQLFHGKAGVLLDNILKAVGLDAAYVHKTCWVKTAAVGSPMPSEQAI 165 Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231 I R+++ +LF+G F + Q + L P Sbjct: 166 ANALGQIARELDGCCAPAVLFLG----QAFVQPERQAMIETL---------CGSRPFFII 212 Query: 232 VHPQELIQYPLIKKNTWHALITLKKALKN 260 HP L++ P +K W L LK+AL+ Sbjct: 213 DHPARLLRQPELKARAWQVLKQLKRALRQ 241 >gi|55379276|ref|YP_137126.1| uracil DNA glycosylase superfamily protein [Haloarcula marismortui ATCC 43049] gi|55232001|gb|AAV47420.1| uracil DNA glycosylase superfamily protein [Haloarcula marismortui ATCC 43049] Length = 239 Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 61/164 (37%), Gaps = 12/164 (7%) Query: 85 RSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTP----SDSDNISGKPFSG------KTG 133 C L + DL+++G P S++++ G +G ++G Sbjct: 47 ADCRRCPELAESRTCISWGNGPLDADLVVVGEAPAEGDSEAEHWQGGNLTGMAYTSRRSG 106 Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 + +L + + HPPGNR+ ++ E+ CRP ++ ++E I P ++ Sbjct: 107 RKVRDLLTDAGFSHDDCYYTNAVKCHPPGNRDPTDAELANCRPYLVEEVEAIEPTAVVAT 166 Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSN-LCTPHSIIPTLATVHPQE 236 G D + L + + +P + +HP Sbjct: 167 GKHATKTVLALDGESLDGFLDSVLDPRRSEALGVPVVPLLHPSY 210 >gi|228964603|ref|ZP_04125711.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar sotto str. T04001] gi|228795034|gb|EEM42532.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar sotto str. T04001] Length = 213 Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 66/184 (35%), Gaps = 30/184 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I + R +++I+ P Sbjct: 26 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 85 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E I+PK+++ +GN + Sbjct: 86 KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKINPKLIVTLGNIGLQRLTGKN 145 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ + T HP + + + + L Sbjct: 146 K-KITDVHGQLLKQPIQKLKDVQSAEFIWSENEYHVFPTFHPASIFYNRSLLELIYEDLE 204 Query: 253 TLKK 256 LK+ Sbjct: 205 KLKR 208 >gi|75761444|ref|ZP_00741412.1| Uracil DNA glycosylase superfamily protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218896558|ref|YP_002444969.1| uracil-DNA glycosylase family protein [Bacillus cereus G9842] gi|228900209|ref|ZP_04064440.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis IBL 4222] gi|74491078|gb|EAO54326.1| Uracil DNA glycosylase superfamily protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218543356|gb|ACK95750.1| uracil-DNA glycosylase family protein [Bacillus cereus G9842] gi|228859378|gb|EEN03807.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis IBL 4222] Length = 213 Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 66/184 (35%), Gaps = 30/184 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I + R +++I+ P Sbjct: 26 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 85 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E I+PK+++ +GN + Sbjct: 86 KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKINPKLIVTLGNIGLQRLTGKN 145 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ + T HP + + + + L Sbjct: 146 K-KITDVHGQLLKQPIQKLKDMQSAEFIWSENEYHVFPTFHPASIFYNRSLLELIYEDLE 204 Query: 253 TLKK 256 LK+ Sbjct: 205 KLKR 208 >gi|156740270|ref|YP_001430399.1| uracil-DNA glycosylase superfamily protein [Roseiflexus castenholzii DSM 13941] gi|156231598|gb|ABU56381.1| Uracil-DNA glycosylase superfamily [Roseiflexus castenholzii DSM 13941] Length = 192 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 64/165 (38%), Gaps = 10/165 (6%) Query: 85 RSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKMLQ 141 ++ C L ++ + ++ IG P + +G PF G ++G ML ++L Sbjct: 8 QNCRSCPALVASRRRIVHGYGDTASGIVFIGEAPGRHGADQTGIPFWGDRSGRMLRRILV 67 Query: 142 SIEIMRT-------QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 + + + I+ + PPGNR + E+ CR + ++++I P++++ +G Sbjct: 68 QVGLASDETAGATLRCFITNVVRCCPPGNRTPTPAEVRACRTWLWMELDMIKPRLIIPVG 127 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 + + + L +HP + + Sbjct: 128 RIALQEVGMRYLKHDPGAIRSVHATVLRSRHVTILPLIHPARISR 172 >gi|257885086|ref|ZP_05664739.1| uracil-DNA glycosylase [Enterococcus faecium 1,231,501] gi|257820938|gb|EEV48072.1| uracil-DNA glycosylase [Enterococcus faecium 1,231,501] Length = 213 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 57/188 (30%), Gaps = 30/188 (15%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 LM++G P ++ + PFSG+ G L + L S + R +++I+ P Sbjct: 26 GQGPLHPKLMLVGEAPGKTEIDTHVPFSGQAGKELMQALSSTGLTREEVYITSAVRSRPY 85 Query: 162 GNRN-----------------LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204 + + E+ PI+ +I+ + P+++ +GN Sbjct: 86 RVTHRINKRTKQQEIVYPNRTPTKAEVLAHAPILDYEIKQVQPQLIATLGNIGLQRLLG- 144 Query: 205 DAQKTYQNLGKWS------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 +N G+ L HP + + Sbjct: 145 KEYTVTKNHGQLYAGPVLQLTEQKDAYEWSEKNYRILPLFHPAAIFYNRSLVPVIHQDWQ 204 Query: 253 TLKKALKN 260 L L+ Sbjct: 205 VLASLLQQ 212 >gi|229084635|ref|ZP_04216903.1| Uracil-DNA glycosylase superfamily [Bacillus cereus Rock3-44] gi|228698658|gb|EEL51375.1| Uracil-DNA glycosylase superfamily [Bacillus cereus Rock3-44] Length = 215 Score = 90.2 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 67/187 (35%), Gaps = 30/187 (16%) Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160 C + LM++G P +++ +G PFSG+ G L L+ I + R +++I+ P Sbjct: 30 CGQGPKKSKLMLVGEAPGETEIHNGIPFSGRAGKELMGFLERIGLTREEVYITSAVRSRP 89 Query: 161 PG----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204 NR + E+ + P++ ++E + +++ +GN Sbjct: 90 YKWREKRERSGQVVQKKYNRTPNQREILVHAPLLDYEMEHVQAPVIVTLGNIALKRLVGP 149 Query: 205 DAQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 + K G+ + + T HP + + + L Sbjct: 150 NK-KITDVHGQLLQQPIQRLKNNQSTDFIWTEKVFNIFPTFHPASIFYNRSLLDLIYEDL 208 Query: 252 ITLKKAL 258 L++ + Sbjct: 209 EKLREYI 215 >gi|52143818|ref|YP_083009.1| uracil-DNA glycosylase family protein; DNA polymerase [Bacillus cereus E33L] gi|51977287|gb|AAU18837.1| uracil-DNA glycosylase family protein; possible DNA polymerase, bacteriophage-type [Bacillus cereus E33L] Length = 213 Score = 90.2 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 65/185 (35%), Gaps = 30/185 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I + R +++I+ P Sbjct: 26 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 85 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E ++PK+++ +GN Sbjct: 86 KWREKKERNGSIIQKKYNRTPNQGEIVAHAPLLDYELEKLNPKLIVTLGNIGLQRLTG-K 144 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 +K G+ T HP + + + + L Sbjct: 145 GKKITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYHIFPTFHPASIFYNRSLLELIYEDLE 204 Query: 253 TLKKA 257 LK+ Sbjct: 205 KLKQY 209 >gi|228984708|ref|ZP_04144880.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228774906|gb|EEM23300.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 216 Score = 90.2 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 30/185 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I + R +++I+ P Sbjct: 29 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 88 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E I+PK+++ +GN D Sbjct: 89 KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKINPKLIVTLGNIGLQRLAGKD 148 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + + + L Sbjct: 149 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYHIFPTFHPASIFYNRSLLELIYEDLE 207 Query: 253 TLKKA 257 LK+ Sbjct: 208 KLKRY 212 >gi|196046576|ref|ZP_03113800.1| uracil-DNA glycosylase family protein [Bacillus cereus 03BB108] gi|225863492|ref|YP_002748870.1| uracil-DNA glycosylase family protein [Bacillus cereus 03BB102] gi|300117443|ref|ZP_07055233.1| uracil-DNA glycosylase family protein [Bacillus cereus SJ1] gi|196022509|gb|EDX61192.1| uracil-DNA glycosylase family protein [Bacillus cereus 03BB108] gi|225787020|gb|ACO27237.1| uracil-DNA glycosylase family protein [Bacillus cereus 03BB102] gi|298725278|gb|EFI65930.1| uracil-DNA glycosylase family protein [Bacillus cereus SJ1] Length = 213 Score = 90.2 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 65/185 (35%), Gaps = 30/185 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I + R +++I+ P Sbjct: 26 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 85 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E ++PK+++ +GN D Sbjct: 86 KWREKKERNGSIIQKKYNRTPNQGEIVAHAPLLDYELEKLNPKLIVTLGNIGLQRLTGKD 145 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + + + L Sbjct: 146 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYHIFPTFHPASIFYNRSLLELIYEDLE 204 Query: 253 TLKKA 257 LK+ Sbjct: 205 KLKQY 209 >gi|118477082|ref|YP_894233.1| uracil-DNA glycosylase family protein [Bacillus thuringiensis str. Al Hakam] gi|229183823|ref|ZP_04311040.1| Uracil-DNA glycosylase superfamily [Bacillus cereus BGSC 6E1] gi|118416307|gb|ABK84726.1| uracil-DNA glycosylase family protein [Bacillus thuringiensis str. Al Hakam] gi|228599672|gb|EEK57275.1| Uracil-DNA glycosylase superfamily [Bacillus cereus BGSC 6E1] Length = 216 Score = 90.2 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 65/185 (35%), Gaps = 30/185 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I + R +++I+ P Sbjct: 29 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 88 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E ++PK+++ +GN D Sbjct: 89 KWREKKERNGSIIQKKYNRTPNQGEIVAHAPLLDYELEKLNPKLIVTLGNIGLQRLTGKD 148 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + + + L Sbjct: 149 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYHIFPTFHPASIFYNRSLLELIYEDLE 207 Query: 253 TLKKA 257 LK+ Sbjct: 208 KLKQY 212 >gi|228945228|ref|ZP_04107584.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228814463|gb|EEM60728.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 216 Score = 90.2 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 65/185 (35%), Gaps = 30/185 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I + R +++I+ P Sbjct: 29 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 88 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E ++PK+++ +GN D Sbjct: 89 KWREKKERNGSIIQKKYNRTPNQGEIVAHAPLLDYELEKLNPKLIVTLGNIGLQRLTGKD 148 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + + + L Sbjct: 149 K-KITDVHGQLLKQPIQKLKDMQSAEFIWSEKEYHIFPTFHPASIFYNRSLLELIYEDLE 207 Query: 253 TLKKA 257 LK+ Sbjct: 208 KLKQY 212 >gi|228926659|ref|ZP_04089728.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228932917|ref|ZP_04095782.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229090591|ref|ZP_04221825.1| Uracil-DNA glycosylase superfamily [Bacillus cereus Rock3-42] gi|229121171|ref|ZP_04250408.1| Uracil-DNA glycosylase superfamily [Bacillus cereus 95/8201] gi|228662290|gb|EEL17893.1| Uracil-DNA glycosylase superfamily [Bacillus cereus 95/8201] gi|228692734|gb|EEL46459.1| Uracil-DNA glycosylase superfamily [Bacillus cereus Rock3-42] gi|228826720|gb|EEM72489.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228833035|gb|EEM78603.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 216 Score = 90.2 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 65/185 (35%), Gaps = 30/185 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I + R +++I+ P Sbjct: 29 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 88 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E ++PK+++ +GN D Sbjct: 89 KWREKKERNGSIIQKKYNRTPNQGEIVAHAPLLDYELEKLNPKLIVTLGNIGLQRLTGKD 148 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + + + L Sbjct: 149 K-KITDVHGQLLKQPIQKLKDMQSAEFIWSEKEYHIFPTFHPASIFYNRSLLELIYEDLE 207 Query: 253 TLKKA 257 LK+ Sbjct: 208 KLKQY 212 >gi|196033461|ref|ZP_03100873.1| uracil-DNA glycosylase family protein [Bacillus cereus W] gi|196038946|ref|ZP_03106253.1| uracil-DNA glycosylase family protein [Bacillus cereus NVH0597-99] gi|218902740|ref|YP_002450574.1| uracil-DNA glycosylase family protein [Bacillus cereus AH820] gi|195993895|gb|EDX57851.1| uracil-DNA glycosylase family protein [Bacillus cereus W] gi|196030091|gb|EDX68691.1| uracil-DNA glycosylase family protein [Bacillus cereus NVH0597-99] gi|218537932|gb|ACK90330.1| uracil-DNA glycosylase family protein [Bacillus cereus AH820] Length = 213 Score = 90.2 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 65/185 (35%), Gaps = 30/185 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I + R +++I+ P Sbjct: 26 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 85 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E ++PK+++ +GN D Sbjct: 86 KWREKKERNGSIIQKKYNRTPNQGEIVAHAPLLDYELEKLNPKLIVTLGNIGLQRLTGKD 145 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + + + L Sbjct: 146 K-KITDVHGQLLKQPIQKLKDMQSAEFIWSEKEYHIFPTFHPASIFYNRSLLELIYEDLE 204 Query: 253 TLKKA 257 LK+ Sbjct: 205 KLKQY 209 >gi|49481003|ref|YP_035745.1| uracil-DNA glycosylase family protein; DNA polymerase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49332559|gb|AAT63205.1| uracil-DNA glycosylase family protein; possible DNA polymerase, bacteriophage-type [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 213 Score = 90.2 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 65/185 (35%), Gaps = 30/185 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I + R +++I+ P Sbjct: 26 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 85 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E ++PK+++ +GN D Sbjct: 86 KWREKKERNGSIIQKKYNRTPNQGEIVAHAPLLDYELEKLNPKLIVTLGNIGLQRLTGKD 145 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + + + L Sbjct: 146 K-KITDVHGQLLKQPIQKLKDMQSAEFIWSEKEYHIFPTFHPASIFYNRSLLELIYEDLE 204 Query: 253 TLKKA 257 LK+ Sbjct: 205 KLKQY 209 >gi|30261625|ref|NP_844002.1| uracil-DNA glycosylase family protein [Bacillus anthracis str. Ames] gi|47526825|ref|YP_018174.1| uracil-DNA glycosylase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49184456|ref|YP_027708.1| uracil-DNA glycosylase family protein [Bacillus anthracis str. Sterne] gi|165869510|ref|ZP_02214169.1| uracil-DNA glycosylase family protein [Bacillus anthracis str. A0488] gi|167633289|ref|ZP_02391614.1| uracil-DNA glycosylase family protein [Bacillus anthracis str. A0442] gi|167639122|ref|ZP_02397395.1| uracil-DNA glycosylase family protein [Bacillus anthracis str. A0193] gi|170686303|ref|ZP_02877525.1| uracil-DNA glycosylase family protein [Bacillus anthracis str. A0465] gi|170706519|ref|ZP_02896979.1| uracil-DNA glycosylase family protein [Bacillus anthracis str. A0389] gi|177650528|ref|ZP_02933495.1| uracil-DNA glycosylase family protein [Bacillus anthracis str. A0174] gi|190568667|ref|ZP_03021572.1| uracil-DNA glycosylase family protein [Bacillus anthracis Tsiankovskii-I] gi|227815624|ref|YP_002815633.1| uracil-DNA glycosylase family protein [Bacillus anthracis str. CDC 684] gi|229602003|ref|YP_002866032.1| uracil-DNA glycosylase family protein [Bacillus anthracis str. A0248] gi|254683116|ref|ZP_05146977.1| uracil-DNA glycosylase family protein [Bacillus anthracis str. CNEVA-9066] gi|254723704|ref|ZP_05185490.1| uracil-DNA glycosylase family protein [Bacillus anthracis str. A1055] gi|254734465|ref|ZP_05192177.1| uracil-DNA glycosylase family protein [Bacillus anthracis str. Western North America USA6153] gi|254740876|ref|ZP_05198564.1| uracil-DNA glycosylase family protein [Bacillus anthracis str. Kruger B] gi|254755114|ref|ZP_05207148.1| uracil-DNA glycosylase family protein [Bacillus anthracis str. Vollum] gi|254759651|ref|ZP_05211675.1| uracil-DNA glycosylase family protein [Bacillus anthracis str. Australia 94] gi|30255853|gb|AAP25488.1| uracil-DNA glycosylase family protein [Bacillus anthracis str. Ames] gi|47501973|gb|AAT30649.1| uracil-DNA glycosylase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49178383|gb|AAT53759.1| uracil-DNA glycosylase family protein [Bacillus anthracis str. Sterne] gi|164714950|gb|EDR20468.1| uracil-DNA glycosylase family protein [Bacillus anthracis str. A0488] gi|167512912|gb|EDR88285.1| uracil-DNA glycosylase family protein [Bacillus anthracis str. A0193] gi|167531327|gb|EDR94005.1| uracil-DNA glycosylase family protein [Bacillus anthracis str. A0442] gi|170128617|gb|EDS97484.1| uracil-DNA glycosylase family protein [Bacillus anthracis str. A0389] gi|170670000|gb|EDT20741.1| uracil-DNA glycosylase family protein [Bacillus anthracis str. A0465] gi|172083672|gb|EDT68732.1| uracil-DNA glycosylase family protein [Bacillus anthracis str. A0174] gi|190560267|gb|EDV14247.1| uracil-DNA glycosylase family protein [Bacillus anthracis Tsiankovskii-I] gi|227003318|gb|ACP13061.1| uracil-DNA glycosylase family protein [Bacillus anthracis str. CDC 684] gi|229266411|gb|ACQ48048.1| uracil-DNA glycosylase family protein [Bacillus anthracis str. A0248] Length = 213 Score = 90.2 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 65/185 (35%), Gaps = 30/185 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I + R +++I+ P Sbjct: 26 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 85 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E ++PK+++ +GN D Sbjct: 86 KWREKKERSGSIIQKKYNRTPNQGEIVAHAPLLDYELEKLNPKLIVTLGNIGLQRLTGKD 145 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + + + L Sbjct: 146 K-KITDVHGQLLKQPIQKLKDMQSAEFIWSEKEYHIFPTFHPASIFYNRSLLELIYEDLE 204 Query: 253 TLKKA 257 LK+ Sbjct: 205 KLKQY 209 >gi|65318894|ref|ZP_00391853.1| COG1573: Uracil-DNA glycosylase [Bacillus anthracis str. A2012] gi|228914204|ref|ZP_04077820.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228845408|gb|EEM90443.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 216 Score = 90.2 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 65/185 (35%), Gaps = 30/185 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I + R +++I+ P Sbjct: 29 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 88 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E ++PK+++ +GN D Sbjct: 89 KWREKKERSGSIIQKKYNRTPNQGEIVAHAPLLDYELEKLNPKLIVTLGNIGLQRLTGKD 148 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + + + L Sbjct: 149 K-KITDVHGQLLKQPIQKLKDMQSAEFIWSEKEYHIFPTFHPASIFYNRSLLELIYEDLE 207 Query: 253 TLKKA 257 LK+ Sbjct: 208 KLKQY 212 >gi|161869342|ref|YP_001598509.1| DNA polymerase, putative [Neisseria meningitidis 053442] gi|161594895|gb|ABX72555.1| DNA polymerase, bacteriophage-type, putative [Neisseria meningitidis 053442] Length = 246 Score = 90.2 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 46/270 (17%), Positives = 90/270 (33%), Gaps = 37/270 (13%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDE----------PNNEATYESQRKEKSIDSAI 50 M S R L + L + + G + P + ++ + Sbjct: 1 MLSARYLHLHEALGLGPMWLKRGAVVLPPATLPESPTQIRPQKQTILSIPQRPSEQHTGQ 60 Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 + ++ + + V + + L + + + A L Sbjct: 61 ARLKTMKALETAAVPTRKPVPETETPLPGVSDGIA-------------PVPAASGI-TRL 106 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170 ++ P D + G+ F GK G +LD +L+++ + +H + GN S Sbjct: 107 AVVSLCPPIEDAVYGQLFHGKAGILLDNILKAVGLDAAYVHKTCWVKTAAVGNPMPSEQA 166 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230 +E I+R+++ +LF+G F + Q + L P Sbjct: 167 IENALGQIIRELDGCRAPAVLFLG----QAFVKPERQTMIETL---------CGCRPFFI 213 Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALKN 260 HP L++ P +K W L LK+AL+ Sbjct: 214 IDHPARLLRQPELKARNWQVLKQLKRALQA 243 >gi|290242944|ref|YP_003494614.1| Uracil-DNA glycosylase superfamily [Thioalkalivibrio sp. K90mix] gi|288945449|gb|ADC73147.1| Uracil-DNA glycosylase superfamily [Thioalkalivibrio sp. K90mix] Length = 205 Score = 90.2 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 60/162 (37%), Gaps = 15/162 (9%) Query: 86 SFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI-E 144 C L T+ + ++ +G P ++ G F G G L++ ++++ Sbjct: 5 DCQRCRLHETAEQVVNPDGARHS-ILAVGEGPGAIEDDYGVGFVGTAGQTLEREIRAVAG 63 Query: 145 IMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204 + R Q + I PP NR E+ C + I+ ++P+++L +G N Sbjct: 64 LGRQQWARANIVRCRPPDNRKPRTDEVSACAGWLDAAIDGMAPRVILAVGESAGRKLANA 123 Query: 205 DAQKTYQNLGKWSNLCTP-------------HSIIPTLATVH 233 +K LG+ L + + +P + H Sbjct: 124 RIRKGTAYLGQVHQLLSGLNPDAGFIRHLPHYRQVPVVPMPH 165 >gi|224369852|ref|YP_002604016.1| predicted phage SPO1 DNA polymerase-related protein [Desulfobacterium autotrophicum HRM2] gi|223692569|gb|ACN15852.1| predicted phage SPO1 DNA polymerase-related protein [Desulfobacterium autotrophicum HRM2] Length = 209 Score = 90.2 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 61/157 (38%), Gaps = 19/157 (12%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 +L I+ P++G G + K+L +I++ R +++I+ + Sbjct: 70 GEGDPNAELFIVTEQ----SQRGVSPYAGDAGELFLKILGAIDLTREKVYITAL------ 119 Query: 162 GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221 ++ M I R+I ++P ++ +G + + + G++ + Sbjct: 120 ----PASGPMTGALERIKREINRVNPTVICTLGGRAAQAMLDRRDPLQ-ELRGRFHDFN- 173 Query: 222 PHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 IP + T HP+ LI K+ W + +K L Sbjct: 174 ---TIPLMPTFHPKTLIHDVARKRPVWEDMKMIKARL 207 >gi|218234014|ref|YP_002366310.1| uracil-DNA glycosylase family protein [Bacillus cereus B4264] gi|218161971|gb|ACK61963.1| uracil-DNA glycosylase family protein [Bacillus cereus B4264] Length = 213 Score = 89.8 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 62/184 (33%), Gaps = 30/184 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I + R +++I+ P Sbjct: 26 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMVFLERIHVTREEVYITSAVRSRPY 85 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E I PK+++ +GN + Sbjct: 86 KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKIHPKLIVTLGNIGLQRLTGKN 145 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + K Sbjct: 146 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYHVFPTFHPASIFYNRSLLKLIHEDFE 204 Query: 253 TLKK 256 LK+ Sbjct: 205 KLKR 208 >gi|47565992|ref|ZP_00237030.1| phage SPO1 DNA polymerase-related protein, putative [Bacillus cereus G9241] gi|47556909|gb|EAL15239.1| phage SPO1 DNA polymerase-related protein, putative [Bacillus cereus G9241] Length = 213 Score = 89.8 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 30/185 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I + R +++I+ P Sbjct: 26 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMSFLERIHVTREEVYITSAVRSRPY 85 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E I+PK+++ +GN D Sbjct: 86 KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKINPKLIVTLGNIGLQRLAGKD 145 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + + + L Sbjct: 146 K-KITDVHGQLLKQPIQKLKDMQSAEFTWAEKEYHIFPTFHPASIFYNRSLLELIYEDLE 204 Query: 253 TLKKA 257 LK+ Sbjct: 205 KLKRY 209 >gi|325569700|ref|ZP_08145747.1| uracil-DNA glycosylase [Enterococcus casseliflavus ATCC 12755] gi|325157256|gb|EGC69421.1| uracil-DNA glycosylase [Enterococcus casseliflavus ATCC 12755] Length = 222 Score = 89.8 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 56/191 (29%), Gaps = 28/191 (14%) Query: 99 TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158 + LMI+G P ++ + PFSG+ G L K L + R ++I+ Sbjct: 28 FVPGQGPLQPKLMIVGEAPGRTEIENFIPFSGQAGKELMKSLALAGLTREDVYITSAVRS 87 Query: 159 HP-----------------PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 P NR + E+ + P++ ++ ++ P ++ +GN Sbjct: 88 RPYSVKERINKRSGAHEIVHPNRTPTKKEVLLHAPLLDYELSIVDPPVIATVGNIGLQRL 147 Query: 202 FNNDAQKTYQ----NLGKWSN-------LCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 N K + HP + + Sbjct: 148 LGNAYYIKDHHGEVIRSKIQESNPTKDGYQWSEKEYLIVPMYHPAAIFYNRTLTPQIEAD 207 Query: 251 LITLKKALKNL 261 L+ L + Sbjct: 208 WRGLRNILSQI 218 >gi|229172266|ref|ZP_04299830.1| Uracil-DNA glycosylase superfamily [Bacillus cereus MM3] gi|228611254|gb|EEK68512.1| Uracil-DNA glycosylase superfamily [Bacillus cereus MM3] Length = 216 Score = 89.8 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 66/185 (35%), Gaps = 30/185 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I++ R +++I+ P Sbjct: 29 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMDFLERIQVKREEVYITSAVRSRPY 88 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E I+PK+++ +GN + Sbjct: 89 KWREKKERNGEMIQKKYNRTPNQGEILAHAPLLDYELENINPKLIVTLGNIGLQRLTGKN 148 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + + + L Sbjct: 149 K-KITDVHGQLLIQPIQKLKDMQSAEFTWSEKEYHIFPTFHPASIFYNRSLLEFIYEDLE 207 Query: 253 TLKKA 257 LKK Sbjct: 208 KLKKY 212 >gi|325129528|gb|EGC52355.1| putative uracil-DNA glycosylase, family 4 [Neisseria meningitidis OX99.30304] gi|325135468|gb|EGC58086.1| putative uracil-DNA glycosylase, family 4 [Neisseria meningitidis M0579] Length = 245 Score = 89.8 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 93/268 (34%), Gaps = 35/268 (13%) Query: 1 MTSKRILSQEQILTIALFYAD--SGVYWVFDEPNNEATYESQRKEKSIDSAIQP------ 52 M S R L + L + + + V + P A Q ++ QP Sbjct: 1 MLSARYLHLHEALGLGPMWLKQAAAVLPPKNTPATPAQARPQTVRAALIRPSQPHNGQAR 60 Query: 53 ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMI 112 + ++ + + V + L L + + A L + Sbjct: 61 LETMKALETAAVPTRKPAPETETPLPGLSDGIA-------------PVPAASGI-TKLAV 106 Query: 113 IGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEME 172 + P D I G+ F GK G +LD +L+++ + +H + GN S +E Sbjct: 107 VSLCPPIEDAIYGQLFHGKAGVLLDNILKAVGLDAAYVHKTCWVKTAAVGNPMPSEAAIE 166 Query: 173 ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATV 232 +M++++ +LF+G F N + Q + L P Sbjct: 167 TATVSVMQELDGCRAPAVLFLG----QAFVNPERQAMIETL---------CGSRPFFIID 213 Query: 233 HPQELIQYPLIKKNTWHALITLKKALKN 260 HP L++ P +K W L LK+AL+ Sbjct: 214 HPARLLRQPELKARAWQVLKQLKRALRQ 241 >gi|157164524|ref|YP_001466643.1| uracil-DNA glycosylase superfamily protein [Campylobacter concisus 13826] gi|112800083|gb|EAT97427.1| putative uracil-DNA glycosylase superfamily [Campylobacter concisus 13826] Length = 217 Score = 89.8 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 68/188 (36%), Gaps = 12/188 (6%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 S+ EL S ++ C L ++S + +M + F G +G Sbjct: 38 NSIDELNSEIKKCSLCFLRNSSKCVSTGFGNKNSKIMFVLLC------KKDDYFEGTSGK 91 Query: 135 MLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNI---EMEICRPIIMRQIELISPKIL 190 +L + + + + + ++IS++ + + E+CRP ++ +I LI PKI+ Sbjct: 92 ILQNAIKEGLNLEKDSVYISLLLRCEISNSDAKNPALKSSFELCRPYLLEEIRLIKPKII 151 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 + +G + + + T P + + P +KN Sbjct: 152 ITLGEQAFMHL--YPNLLSKGGFSSIRGSILKDDDRFIMPTFSPGWISKNPSFEKNFIDD 209 Query: 251 LITLKKAL 258 L +K + Sbjct: 210 LKKIKGVI 217 >gi|116748482|ref|YP_845169.1| uracil-DNA glycosylase superfamily protein [Syntrophobacter fumaroxidans MPOB] gi|116697546|gb|ABK16734.1| Uracil-DNA glycosylase superfamily [Syntrophobacter fumaroxidans MPOB] Length = 194 Score = 89.8 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 64/170 (37%), Gaps = 11/170 (6%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLST-ICATQTEGQD-LMIIGYTPSDSDNISGKPFS 129 K SLH L +R + + + +++IG P + GKPF Sbjct: 5 DKERSLHALYDAIRR-DAFYRKENMGDVFVPGDGSMEDGVIVLIGEAPGRDEEREGKPFV 63 Query: 130 GKTGNMLDKMLQSIEIMRTQIHISMISPWHPP----GNRNLSNIEMEICRPIIMRQIELI 185 G G L+ +L + R + I+ + + P NR+ + E P + R+++++ Sbjct: 64 GAAGRNLNALLLENGLAREDLFITNLLKYRPRTSTGANRSPAAAECRYALPFLERELDIL 123 Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 P + + +G N+ K + G + + L T HP Sbjct: 124 RPGLAVCLGLSPAKALLNDPHLKMGRANGALF----RGAGLNILVTYHPS 169 >gi|257865744|ref|ZP_05645397.1| uracil-DNA glycosylase [Enterococcus casseliflavus EC30] gi|257872079|ref|ZP_05651732.1| uracil-DNA glycosylase [Enterococcus casseliflavus EC10] gi|257875374|ref|ZP_05655027.1| uracil-DNA glycosylase [Enterococcus casseliflavus EC20] gi|257799678|gb|EEV28730.1| uracil-DNA glycosylase [Enterococcus casseliflavus EC30] gi|257806243|gb|EEV35065.1| uracil-DNA glycosylase [Enterococcus casseliflavus EC10] gi|257809540|gb|EEV38360.1| uracil-DNA glycosylase [Enterococcus casseliflavus EC20] Length = 217 Score = 89.4 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 56/191 (29%), Gaps = 28/191 (14%) Query: 99 TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158 + LMI+G P ++ + PFSG+ G L K L + R ++I+ Sbjct: 23 FVPGQGPLQPKLMIVGEAPGRTEIENFIPFSGQAGKELMKSLALAGLTREDVYITSAVRS 82 Query: 159 HP-----------------PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 P NR + E+ + P++ ++ ++ P ++ +GN Sbjct: 83 RPYSIKERINKRSGAHEIVHPNRTPTKKEVLLHAPLLDYELSVVDPPVIATVGNIGLQRL 142 Query: 202 FNNDAQKTYQ----NLGKWSN-------LCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 N K + HP + + Sbjct: 143 LGNAYYIKDHHGEVIRSKIQESNPTKDGYQWSEKEYLIVPMYHPAAIFYNRTLTPQIEAD 202 Query: 251 LITLKKALKNL 261 L+ L + Sbjct: 203 WRGLRNILSQI 213 >gi|228920339|ref|ZP_04083686.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228839362|gb|EEM84656.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 213 Score = 89.4 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 66/184 (35%), Gaps = 30/184 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I++ R +++I+ P Sbjct: 26 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMDFLERIDVTREEVYITSAVRSRPY 85 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E I+PK+++ +GN + Sbjct: 86 KWREKKERNGEVMQKKYNRTPNQGEIVAHAPLLDYELEKINPKLIVTLGNIGLQRLTGKN 145 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + + + L Sbjct: 146 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYEVFPTFHPASIFYNRGLLELIYEDLE 204 Query: 253 TLKK 256 LK+ Sbjct: 205 KLKR 208 >gi|209972970|ref|YP_002300417.1| gp31 [Bacillus phage SPO1] gi|209871290|gb|ACI91046.1| gp31 [Bacillus phage SPO1] Length = 925 Score = 89.4 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 7/169 (4%) Query: 92 LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI- 150 L + + ++ ++I+ P D + K +GK G +L L + I + Sbjct: 8 LKEFNPKPMKGQGSKKARIIIVQENPFDYEYRKKKYMTGKAGKLLKFGLAEVGIDPDEDV 67 Query: 151 HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210 + + I + P NR + E++ + +IE+I P I++ GN + F A Sbjct: 68 YYTSIVKYPTPENRLPTPDEIKESMDYMWAEIEVIDPDIIIPTGNLSLKFLTKMTA--IT 125 Query: 211 QNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 + GK + +HP +++ P + L L L+ Sbjct: 126 KVRGKLYEIE----GRKFFPMIHPNTVLKQPKYQDFFIKDLEILASLLE 170 >gi|216114|gb|AAA03732.1| DNA polymerase [Bacillus phage SPO1] Length = 924 Score = 89.4 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 7/169 (4%) Query: 92 LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI- 150 L + + ++ ++I+ P D + K +GK G +L L + I + Sbjct: 8 LKEFNPKPMKGQGSKKARIIIVQENPFDYEYRKKKYMTGKAGKLLKFGLAEVGIDPDEDV 67 Query: 151 HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210 + + I + P NR + E++ + +IE+I P I++ GN + F A Sbjct: 68 YYTSIVKYPTPENRLPTPDEIKESMDYMWAEIEVIDPDIIIPTGNLSLKFLTKMTA--IT 125 Query: 211 QNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 + GK + +HP +++ P + L L L+ Sbjct: 126 KVRGKLYEIE----GRKFFPMIHPNTVLKQPKYQDFFIKDLEILASLLE 170 >gi|461960|sp|P30314|DPOL_BPSP1 RecName: Full=DNA polymerase Length = 924 Score = 89.4 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 7/169 (4%) Query: 92 LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI- 150 L + + ++ ++I+ P D + K +GK G +L L + I + Sbjct: 8 LKEFNPKPMKGQGSKKARIIIVQENPFDYEYRKKKYMTGKAGKLLKFGLAEVGIDPDEDV 67 Query: 151 HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210 + + I + P NR + E++ + +IE+I P I++ GN + F A Sbjct: 68 YYTSIVKYPTPENRLPTPDEIKESMDYMWAEIEVIDPDIIIPTGNLSLKFLTKMTA--IT 125 Query: 211 QNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 + GK + +HP +++ P + L L L+ Sbjct: 126 KVRGKLYEIE----GRKFFPMIHPNTVLKQPKYQDFFIKDLEILASLLE 170 >gi|297196413|ref|ZP_06913811.1| DNA polymerase [Streptomyces pristinaespiralis ATCC 25486] gi|297153208|gb|EFH32208.1| DNA polymerase [Streptomyces pristinaespiralis ATCC 25486] Length = 213 Score = 89.4 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 45/136 (33%), Gaps = 10/136 (7%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L L+ C L + T+ ++++G P D ++ G PF G G +L Sbjct: 69 LPALRKAAAGCEGCPLFRNASRTVFGAGPSSARVVVVGEQPGDQEDRQGAPFVGPAGRLL 128 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSN---------IEMEICRPIIMRQIELISP 187 + L+ + I + + EM CRP + ++ +I P Sbjct: 129 REALEEVGIEEESAYFTNAVKHFKFEPAARGKRRIHKSPSLREMSACRPWLAAELRVIQP 188 Query: 188 KILLFIGN-KTKNFFF 202 ++ G Sbjct: 189 ELFAGSGRDLFVKALL 204 >gi|229155194|ref|ZP_04283306.1| Uracil-DNA glycosylase superfamily [Bacillus cereus ATCC 4342] gi|228628321|gb|EEK85036.1| Uracil-DNA glycosylase superfamily [Bacillus cereus ATCC 4342] Length = 216 Score = 89.4 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 30/185 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I + R +++I+ P Sbjct: 29 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 88 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E I+PK+++ +GN D Sbjct: 89 KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKINPKLIVTLGNIGLQRLAGKD 148 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + + + L Sbjct: 149 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSEQEYHIFPTFHPASIFYNRSLLELIYEDLE 207 Query: 253 TLKKA 257 LK+ Sbjct: 208 KLKRY 212 >gi|229029309|ref|ZP_04185398.1| Uracil-DNA glycosylase superfamily [Bacillus cereus AH1271] gi|228732007|gb|EEL82900.1| Uracil-DNA glycosylase superfamily [Bacillus cereus AH1271] Length = 217 Score = 89.4 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 67/188 (35%), Gaps = 30/188 (15%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L + L+ I + R +++I+ P Sbjct: 30 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMEFLERIHVTREEVYITSTVRSRPY 89 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E I+PK+++ +GN Sbjct: 90 KWREKKERNGEIIQKKYNRTPNQGEILAHAPLLDYELEKINPKLIVTLGNIGLQRLIG-K 148 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + + + L Sbjct: 149 NTKITDVHGQLLKKPIQKLKDMQSVEFTWSEKEYHIFPTFHPASIFYNRSLLELIYEDLE 208 Query: 253 TLKKALKN 260 L+K ++ Sbjct: 209 KLEKYVRK 216 >gi|148654495|ref|YP_001274700.1| uracil-DNA glycosylase superfamily protein [Roseiflexus sp. RS-1] gi|148566605|gb|ABQ88750.1| Uracil-DNA glycosylase superfamily [Roseiflexus sp. RS-1] Length = 193 Score = 89.4 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 62/165 (37%), Gaps = 10/165 (6%) Query: 85 RSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKMLQ 141 + C L ++ + ++ IG P + +G PF G ++G +L +ML Sbjct: 9 QHCVRCPALVASRRRIVHGYGDVMSGIVFIGEAPGRHGADQTGIPFWGDRSGRILRRMLV 68 Query: 142 SIEIMRT-------QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 + + + I+ PPGNR + E++ CR + +++ I P++L+ +G Sbjct: 69 RMGLASDETATASLRCFITNTVRCCPPGNRTPTAAEVQACREWLDTELDAIKPRLLVPVG 128 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 + + + L +HP + + Sbjct: 129 RIALQEVGKRYLEGAPGAIRTLHATVLRGREVTILPMMHPARISR 173 >gi|296313436|ref|ZP_06863377.1| uracil-DNA glycosylase, family 4 [Neisseria polysaccharea ATCC 43768] gi|296840023|gb|EFH23961.1| uracil-DNA glycosylase, family 4 [Neisseria polysaccharea ATCC 43768] Length = 247 Score = 89.4 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 46/270 (17%), Positives = 90/270 (33%), Gaps = 37/270 (13%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDE----------PNNEATYESQRKEKSIDSAI 50 M S R L + L + + G + P + ++ + Sbjct: 1 MLSARYLHLHEALGLGPMWLKRGAVVLPPATLPESPTQIRPQKQTVLSIPQRPSEQHTGQ 60 Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 + ++ + + V + + L + + T + + L Sbjct: 61 ARLKTMKVLETTAVHTRKPVPKTETPLPGVSDGI--------------TPVSAASGITKL 106 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170 ++ P D + G+ F GK G +LD +L+++ + +H + GN S Sbjct: 107 AVVSLCPPTEDMVYGQLFHGKAGVLLDNILKAVGLDAAYVHKTSWVKTAAVGNPMPSEAA 166 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230 +E IM++++ +LF+G F Q + L P Sbjct: 167 IETATVSIMQELDGCRAPAVLFLG----QAFVQPKRQTMIETL---------CGSRPFFI 213 Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALKN 260 HP L++ P +K W L LK+AL+ Sbjct: 214 IDHPARLLRQPELKARNWQVLKQLKRALRQ 243 >gi|218665955|ref|YP_002425654.1| uracil-DNA glycosylase, family 4 [Acidithiobacillus ferrooxidans ATCC 23270] gi|218518168|gb|ACK78754.1| uracil-DNA glycosylase, family 4 [Acidithiobacillus ferrooxidans ATCC 23270] Length = 203 Score = 89.0 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 60/188 (31%), Gaps = 23/188 (12%) Query: 84 LRSFHDCH-LCSTSLSTICAT---QTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKM 139 + + C LC++ + +++IG P ++ GK F G+ G+ L + Sbjct: 1 MDNCQRCPSLCASRTQIVFPDLPEFGRYCRVLVIGEAPGADEDAQGKGFVGRAGHTLHAL 60 Query: 140 LQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTK 198 ++ + R + I PP NR ++IE+ +C P + I P +L +G Sbjct: 61 MEEHGLRRGHDYGCANIVRCRPPENRKPTDIEIGMCLPNLANTIANARPVAVLAVGETAT 120 Query: 199 NFFFNNDAQKTYQNLGKWSNLCT--------------PHSIIPTLATVHPQELI--QY-P 241 ++ + H L + P Sbjct: 121 RAITGIRGLSENLRFLRYHDHDPIPAEMLCNLNIRAMWPHGAKLFPMPHTSPLAWNRNAP 180 Query: 242 L-IKKNTW 248 K + W Sbjct: 181 DGRKWSAW 188 >gi|312870100|ref|ZP_07730236.1| uracil-DNA glycosylase, family 4 [Lactobacillus oris PB013-T2-3] gi|311094403|gb|EFQ52711.1| uracil-DNA glycosylase, family 4 [Lactobacillus oris PB013-T2-3] Length = 219 Score = 89.0 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 55/182 (30%), Gaps = 28/182 (15%) Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160 D+M++G P + PFSG +G L K+L SI R +I+ + P Sbjct: 27 PGQGPLHPDIMLVGEAPGRHEEQVNIPFSGASGQELMKLLNSIGYSRENTYITSVVRQRP 86 Query: 161 PG-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 NR + E+ P+ ++ ++P+I++ +GN Sbjct: 87 YSIKQVRDKKTGELVEKRPNRTPTKKEVLAFAPLFDWELATVAPRIIVPLGNTALQRLLG 146 Query: 204 NDAQKTYQNLGKW-----------SNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 A + K + HP ++ + Sbjct: 147 PTANIGELHGQKLVRPIQQAASDGKGYQWSTDDYTLVPMYHPAAILYARRLLPTVQADWQ 206 Query: 253 TL 254 L Sbjct: 207 KL 208 >gi|229043374|ref|ZP_04191091.1| Uracil-DNA glycosylase superfamily [Bacillus cereus AH676] gi|228725955|gb|EEL77195.1| Uracil-DNA glycosylase superfamily [Bacillus cereus AH676] Length = 216 Score = 89.0 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 64/188 (34%), Gaps = 30/188 (15%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I + R +++I+ P Sbjct: 29 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMVFLERIYVTREEVYITSAVRSRPY 88 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E I PK+++ +GN + Sbjct: 89 KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKIHPKLIVTLGNIGLQRLTGKN 148 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + + Sbjct: 149 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYHVFPTFHPASIFYNRSLLELIHEDFE 207 Query: 253 TLKKALKN 260 LK+ +K Sbjct: 208 KLKRLVKK 215 >gi|229138323|ref|ZP_04266917.1| Uracil-DNA glycosylase superfamily [Bacillus cereus BDRD-ST26] gi|228645088|gb|EEL01326.1| Uracil-DNA glycosylase superfamily [Bacillus cereus BDRD-ST26] Length = 236 Score = 89.0 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 65/185 (35%), Gaps = 30/185 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I + R +++I+ P Sbjct: 49 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMVFLERIHVTREEVYITSAVRSRPY 108 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E ++PK+++ +GN Sbjct: 109 KWREKKERNGSIIQKKYNRTPNQGEIVAHAPLLDYELEKLNPKLIVTLGNIGLQRLTG-K 167 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 +K G+ T HP + + + + L Sbjct: 168 GKKITDVHGQLLKQPIQKLKDIQSAEFTWSEKEYHIFPTFHPASIFYNRGLLELIYEDLE 227 Query: 253 TLKKA 257 LK+ Sbjct: 228 KLKQY 232 >gi|217959110|ref|YP_002337658.1| uracil-DNA glycosylase family protein [Bacillus cereus AH187] gi|217064976|gb|ACJ79226.1| uracil-DNA glycosylase family protein [Bacillus cereus AH187] Length = 213 Score = 89.0 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 65/185 (35%), Gaps = 30/185 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I + R +++I+ P Sbjct: 26 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMVFLERIHVTREEVYITSAVRSRPY 85 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E ++PK+++ +GN Sbjct: 86 KWREKKERNGSIIQKKYNRTPNQGEIVAHAPLLDYELEKLNPKLIVTLGNIGLQRLTG-K 144 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 +K G+ T HP + + + + L Sbjct: 145 GKKITDVHGQLLKQPIQKLKDIQSAEFTWSEKEYHIFPTFHPASIFYNRGLLELIYEDLE 204 Query: 253 TLKKA 257 LK+ Sbjct: 205 KLKQY 209 >gi|222095259|ref|YP_002529319.1| uracil-DNA glycosylase family protein; DNA polymerase, bacteriophage-type [Bacillus cereus Q1] gi|221239317|gb|ACM12027.1| uracil-DNA glycosylase family protein; possible DNA polymerase, bacteriophage-type [Bacillus cereus Q1] Length = 213 Score = 89.0 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 65/185 (35%), Gaps = 30/185 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I + R +++I+ P Sbjct: 26 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 85 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E ++PK+++ +GN Sbjct: 86 KWREKKERNGSIIQKKYNRTPNQGEIVAHAPLLDYELEKLNPKLIVTLGNIGLQRLTG-K 144 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 +K G+ T HP + + + + L Sbjct: 145 GKKITDVHGQLLKQPIQKLKDIQSAEFTWSEKEYHIFPTFHPASIFYNRGLLELIYEDLE 204 Query: 253 TLKKA 257 LK+ Sbjct: 205 KLKQY 209 >gi|206975023|ref|ZP_03235938.1| uracil-DNA glycosylase family protein [Bacillus cereus H3081.97] gi|206747042|gb|EDZ58434.1| uracil-DNA glycosylase family protein [Bacillus cereus H3081.97] Length = 220 Score = 89.0 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 65/185 (35%), Gaps = 30/185 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I + R +++I+ P Sbjct: 33 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 92 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E ++PK+++ +GN Sbjct: 93 KWREKKERNGSIIQKKYNRTPNQGEIVAHAPLLDYELEKLNPKLIVTLGNIGLQRLTG-K 151 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 +K G+ T HP + + + + L Sbjct: 152 GKKITDVHGQLLKQPIQKLKDIQSAEFTWSEKEYHIFPTFHPASIFYNRGLLELIYEDLE 211 Query: 253 TLKKA 257 LK+ Sbjct: 212 KLKQY 216 >gi|118473070|ref|YP_889282.1| uracil-DNA glycosylase superfamily protein [Mycobacterium smegmatis str. MC2 155] gi|118174357|gb|ABK75253.1| uracil-DNA glycosylase superfamily protein [Mycobacterium smegmatis str. MC2 155] Length = 290 Score = 88.7 bits (218), Expect = 7e-16, Method: Composition-based stats. Identities = 34/244 (13%), Positives = 67/244 (27%), Gaps = 40/244 (16%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P+ + Q +A A +L +L +++ C Sbjct: 17 PHPRTGQLFPSPVPPGTGWPGDPATPSTPVAKTPAQVRRLAASAKTLDDLDAMISVCRAC 76 Query: 91 HLCSTSLSTIC------------------ATQTEGQDLMIIGYTPSDSD-NISGKPFSG- 130 + E ++I G P+ N +G+ F+G Sbjct: 77 PRLVAWREEVAVTKRKSFADQPYWGRPATGFGPEAPRILIAGLAPAAQGANRTGRVFTGD 136 Query: 131 KTGNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177 ++G+ L L + + ++ PPGN E C P Sbjct: 137 RSGDFLFAALHRAGLANQAVCVDAADGMRLIDTRMAAAVRCAPPGN-APEPAERATCAPW 195 Query: 178 IMRQIELISPK--ILLFIGNKTKNFFF----NNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231 + + L+ P +++ +G + G + L T + + L Sbjct: 196 LAAEWRLVGPSVAVIVALGGFAWRAALELIADRPKPAPKFGHGATATLTTAYGDVTLLGC 255 Query: 232 VHPQ 235 HP Sbjct: 256 YHPS 259 >gi|261400553|ref|ZP_05986678.1| uracil-DNA glycosylase, family 4 [Neisseria lactamica ATCC 23970] gi|269209623|gb|EEZ76078.1| uracil-DNA glycosylase, family 4 [Neisseria lactamica ATCC 23970] Length = 245 Score = 88.7 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 90/271 (33%), Gaps = 41/271 (15%) Query: 1 MTSKRILSQEQILTIAL-FYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNI--- 56 M S R L + L + + + P N Q + +++ +A + Sbjct: 1 MLSARYLHLHEALGLGPMWLKQA---AAVLPPKNTPAPSVQARPQTVRAAPIRPSQPHNV 57 Query: 57 -------RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD 109 + + + V + + L + + + A Sbjct: 58 QARLETMKALETAAVPTRKPVPETETPLPGVSDGIA-------------PVPAASGI-TR 103 Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI 169 L ++ P D + G+ F GK G +LD +L+++ + +H + GN S Sbjct: 104 LAVVSLCPPTEDAVYGQLFHGKAGILLDNILKAVGLDAAYVHKTCWVKTAAVGNPMPSEQ 163 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 +E I R+++ +LF+G F + Q + L P Sbjct: 164 AIENALGQIARELDGCRAPAVLFLG----QAFVQPERQTMIETL---------CGSRPFF 210 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 HP L++ P +K W L LK AL+ Sbjct: 211 IIDHPARLLRQPELKARAWQVLKQLKHALRQ 241 >gi|300361921|ref|ZP_07058098.1| uracil-DNA glycosylase [Lactobacillus gasseri JV-V03] gi|300354540|gb|EFJ70411.1| uracil-DNA glycosylase [Lactobacillus gasseri JV-V03] Length = 216 Score = 88.7 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 60/189 (31%), Gaps = 31/189 (16%) Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160 LMIIG P + S PF G +G L K L SI + R ++I+ P Sbjct: 25 FGAGPVHPKLMIIGEAPGREEVESLIPFHGASGKELMKSLASIGLKREDVYITSAVRSRP 84 Query: 161 PG-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 NR + E+ P++ +++ PKI++ +G + + Sbjct: 85 YSVKRVFSKKENKEVIKYPNRKPTKKEILAHAPLLDFELQYAQPKIIVTVGKTALSRLLD 144 Query: 204 NDAQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 + + + GK + HP + + Sbjct: 145 HK-YEISKVHGKIIKNTSILELNSKKDGYVWSKEKYTVIPQYHPAAVFYNRKLTDTIAQD 203 Query: 251 LITLKKALK 259 + +K +K Sbjct: 204 WLNIKPLIK 212 >gi|307292872|ref|ZP_07572718.1| uracil-DNA glycosylase superfamily [Sphingobium chlorophenolicum L-1] gi|306880938|gb|EFN12154.1| uracil-DNA glycosylase superfamily [Sphingobium chlorophenolicum L-1] Length = 240 Score = 88.7 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 46/244 (18%), Positives = 83/244 (34%), Gaps = 23/244 (9%) Query: 18 FYADSGVYW-VFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACS 76 ++ +GV V +EP + + + +P +I A A Sbjct: 19 WWNLAGVDCPVGEEPVDWL--------RPAQTPARPAISIGDDGPVPAHAPAKPASFAAF 70 Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L L + I LM+I P +D +G S + G + Sbjct: 71 LTWLSEDAAQPER--RWPGA--MILPEGPAEAPLMVITDMPDPADVAAGTLLSDRAGQLF 126 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 D ML++I + R IH++ + PPG ++ + + + L +P+ LL +G++ Sbjct: 127 DGMLRAIGLKRADIHLASLFLSRPPGAMVEASD-LAAAAARMRTHVMLAAPRRLLLLGDR 185 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 T + + AT HP+ L+ P K W L L + Sbjct: 186 TIRSLLPDAGS---------RIFNHDGGTLAAFATFHPRLLLGQPAAKAECWRVLQGLIE 236 Query: 257 ALKN 260 + Sbjct: 237 EMSE 240 >gi|229078811|ref|ZP_04211364.1| Uracil-DNA glycosylase superfamily [Bacillus cereus Rock4-2] gi|228704493|gb|EEL56926.1| Uracil-DNA glycosylase superfamily [Bacillus cereus Rock4-2] Length = 213 Score = 88.7 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 63/184 (34%), Gaps = 30/184 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I++ R +++I+ P Sbjct: 26 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMDFLERIDVTREEVYITSAVRSRPY 85 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E I PK+++ +GN + Sbjct: 86 KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKIHPKLIVTLGNIGLQRLTGKN 145 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + + Sbjct: 146 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYHVFPTFHPASIFYNRSLLELIHEDFE 204 Query: 253 TLKK 256 LK+ Sbjct: 205 KLKR 208 >gi|304388415|ref|ZP_07370522.1| DNA polymerase [Neisseria meningitidis ATCC 13091] gi|304337596|gb|EFM03758.1| DNA polymerase [Neisseria meningitidis ATCC 13091] Length = 246 Score = 88.7 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 86/270 (31%), Gaps = 37/270 (13%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDE----------PNNEATYESQRKEKSIDSAI 50 M S R L + L + + G + P + ++ + Sbjct: 1 MLSARYLHLHEALGLGPMWLKRGAVVLPSATLPESPTQIRPQKQTVLSIPQRPSEQHTGQ 60 Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 + ++ + + V + L + + + A L Sbjct: 61 ARLETMKALETAAVPTRKPAPETETPLSGVSDGIA-------------PVPAASGI-TKL 106 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170 ++ P D + G+ F GK G +LD +L+++ + +H + GN S Sbjct: 107 AVVSLCPPIEDAVYGQLFHGKAGVLLDNILKAVGLDAAYVHKTCWVKTAAVGNPMPSEQA 166 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230 + I R+++ +LF+G F + Q + L P Sbjct: 167 VANALGQIARELDGCCAPAVLFLG----QAFVQPERQAMIETL---------CGSRPFFI 213 Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALKN 260 HP L++ P +K W L LK AL+ Sbjct: 214 IDHPARLLRQPELKARNWQVLKQLKHALQA 243 >gi|206970527|ref|ZP_03231479.1| uracil-DNA glycosylase family protein [Bacillus cereus AH1134] gi|229069181|ref|ZP_04202472.1| Uracil-DNA glycosylase superfamily [Bacillus cereus F65185] gi|206734163|gb|EDZ51333.1| uracil-DNA glycosylase family protein [Bacillus cereus AH1134] gi|228713933|gb|EEL65817.1| Uracil-DNA glycosylase superfamily [Bacillus cereus F65185] Length = 213 Score = 88.3 bits (217), Expect = 9e-16, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 63/184 (34%), Gaps = 30/184 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I++ R +++I+ P Sbjct: 26 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMDFLERIDVTREEVYITSAVRSRPY 85 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E I PK+++ +GN + Sbjct: 86 KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKIHPKLIVTLGNIGLQRLTGKN 145 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + + Sbjct: 146 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYHVFPTFHPASIFYNRSLLELIHEDFE 204 Query: 253 TLKK 256 LK+ Sbjct: 205 KLKR 208 >gi|154148675|ref|YP_001406203.1| uracil-DNA glycosylase superfamily protein [Campylobacter hominis ATCC BAA-381] gi|153804684|gb|ABS51691.1| putative uracil-DNA glycosylase superfamily [Campylobacter hominis ATCC BAA-381] Length = 213 Score = 88.3 bits (217), Expect = 9e-16, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 73/186 (39%), Gaps = 5/186 (2%) Query: 73 KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 +L E+ ++ + C LC + + I +E ++M I +PS++D +GK +SG Sbjct: 33 SFDNLDEMMKEIKVCNLCELCKSKSADILPQGSESSEIMAIFLSPSEADEKNGKIYSGNF 92 Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192 G + ++ ++ +I+ + + P ++S + C P I +I+L+ PKI+L Sbjct: 93 GKKILELFDECKLSSHKIYTTFLIKC--PAPNDISMRTIVNCSPYIFDEIKLVKPKIVLL 150 Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 G N+ + + T + P + L Sbjct: 151 FGAIVSKIVLRNEQMPDISL---IHGSMFMDGDVKFMPTFDMHFIALNPSKIELFKADLK 207 Query: 253 TLKKAL 258 K+L Sbjct: 208 KAGKSL 213 >gi|15922736|ref|NP_378405.1| hypothetical protein ST2405 [Sulfolobus tokodaii str. 7] gi|15623527|dbj|BAB67514.1| 217aa long conserved hypothetical protein [Sulfolobus tokodaii str. 7] Length = 217 Score = 88.3 bits (217), Expect = 9e-16, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 71/208 (34%), Gaps = 37/208 (17%) Query: 80 LKSLLRSFHDCHL----------------CSTSLSTICATQTEGQDLMIIGYTPSDS-DN 122 L + S C + + E ++I+G P+ N Sbjct: 5 LYDEIVSCSRCERLIEYRKNFKIPPRFKDWNYWNKPVPGFGDEKAKILIVGLAPALHGGN 64 Query: 123 ISGKPFSG-KTGNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSN 168 +G+ F+G ++G + K L ++ + + +++ PP N + Sbjct: 65 RTGRVFTGDESGKWVIKGLYALGLSNKEEGKTREDGLEVKEVYLTNTVKCAPPKN-KPTR 123 Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT 228 E+ C ++ +I+ + K++L +G + + K+ G + P I Sbjct: 124 EEISNCSRFLIEEIKSLRIKVILALGRIAFDTILSLYGIKSKFYHGVV--IKLPDDKI-L 180 Query: 229 LATVHPQELIQYPLIKKNTWHALITLKK 256 + + HP Q + W I + K Sbjct: 181 IGSYHPSA--QNTKTGRLKWEDWIKILK 206 >gi|296502198|ref|YP_003663898.1| DNA polymerase [Bacillus thuringiensis BMB171] gi|296323250|gb|ADH06178.1| DNA polymerase [Bacillus thuringiensis BMB171] Length = 213 Score = 88.3 bits (217), Expect = 9e-16, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 62/184 (33%), Gaps = 30/184 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I + R +++I+ P Sbjct: 26 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMVFLERIHVTREEVYITSAVRSRPY 85 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E I PK+++ +GN + Sbjct: 86 KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKIHPKLIVTLGNIGLQRLTGKN 145 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + + Sbjct: 146 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYHVFPTFHPASIFYNRSLLELIHEDFE 204 Query: 253 TLKK 256 LK+ Sbjct: 205 KLKR 208 >gi|228957904|ref|ZP_04119644.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar pakistani str. T13001] gi|229109084|ref|ZP_04238684.1| Uracil-DNA glycosylase superfamily [Bacillus cereus Rock1-15] gi|229144227|ref|ZP_04272641.1| Uracil-DNA glycosylase superfamily [Bacillus cereus BDRD-ST24] gi|228639235|gb|EEK95651.1| Uracil-DNA glycosylase superfamily [Bacillus cereus BDRD-ST24] gi|228674362|gb|EEL29606.1| Uracil-DNA glycosylase superfamily [Bacillus cereus Rock1-15] gi|228801820|gb|EEM48697.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar pakistani str. T13001] Length = 216 Score = 88.3 bits (217), Expect = 9e-16, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 62/184 (33%), Gaps = 30/184 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I + R +++I+ P Sbjct: 29 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMVFLERIHVTREEVYITSAVRSRPY 88 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E I PK+++ +GN + Sbjct: 89 KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKIHPKLIVTLGNIGLQRLTGKN 148 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + + Sbjct: 149 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYHVFPTFHPASIFYNRSLLELIHEDFE 207 Query: 253 TLKK 256 LK+ Sbjct: 208 KLKR 211 >gi|229126942|ref|ZP_04255953.1| Uracil-DNA glycosylase superfamily [Bacillus cereus BDRD-Cer4] gi|229149826|ref|ZP_04278054.1| Uracil-DNA glycosylase superfamily [Bacillus cereus m1550] gi|228633507|gb|EEK90108.1| Uracil-DNA glycosylase superfamily [Bacillus cereus m1550] gi|228656542|gb|EEL12369.1| Uracil-DNA glycosylase superfamily [Bacillus cereus BDRD-Cer4] Length = 216 Score = 88.3 bits (217), Expect = 9e-16, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 62/184 (33%), Gaps = 30/184 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I + R +++I+ P Sbjct: 29 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMVFLERIHVTREEVYITSAVRSRPY 88 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E I PK+++ +GN + Sbjct: 89 KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKIHPKLIVTLGNIGLQRLTGKN 148 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + + Sbjct: 149 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYHVFPTFHPASIFYNRSLLELIHEDFE 207 Query: 253 TLKK 256 LK+ Sbjct: 208 KLKR 211 >gi|30019677|ref|NP_831308.1| DNA polymerase [Bacillus cereus ATCC 14579] gi|29895221|gb|AAP08509.1| DNA polymerase, bacteriophage-type [Bacillus cereus ATCC 14579] Length = 213 Score = 88.3 bits (217), Expect = 9e-16, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 62/184 (33%), Gaps = 30/184 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I + R +++I+ P Sbjct: 26 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMVFLERIHVTREEVYITSAVRSRPY 85 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E I PK+++ +GN + Sbjct: 86 KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKIHPKLIVTLGNIGLQRLTGKN 145 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + + Sbjct: 146 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYHVFPTFHPASIFYNRSLLELIHEDFE 204 Query: 253 TLKK 256 LK+ Sbjct: 205 KLKR 208 >gi|218660219|ref|ZP_03516149.1| probable DNA-directed DNA polymerase protein [Rhizobium etli IE4771] Length = 157 Score = 88.3 bits (217), Expect = 9e-16, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 57/134 (42%), Gaps = 11/134 (8%) Query: 113 IGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRN 165 +G P D ++I+G+PF G G++LD L+ + R Q +++ + Sbjct: 1 VGEQPGDREDIAGRPFVGPAGHLLDHCLEEAGLNREQCYVTNAVKHFKFTPRGKRRLHAK 60 Query: 166 LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI 225 + E+ C + ++ ++ PK+++ +G A+ G P + Sbjct: 61 PNAGEIRRCAWWLGAELNILQPKLVVALGASALYALLGPKAKL-TPERGHILQ---PRNH 116 Query: 226 IPTLATVHPQELIQ 239 P L T+HP L++ Sbjct: 117 PPVLVTIHPSFLLR 130 >gi|310779487|ref|YP_003967820.1| DNA polymerase [Ilyobacter polytropus DSM 2926] gi|309748810|gb|ADO83472.1| DNA polymerase [Ilyobacter polytropus DSM 2926] Length = 193 Score = 88.3 bits (217), Expect = 9e-16, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 65/169 (38%), Gaps = 12/169 (7%) Query: 97 LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156 + D++ IG P ++ + + G +G K+ ++ + +I+ IS Sbjct: 30 RKLLLGGGNTKGDILFIGDDPDLFEDENMRVLPGTSGEFFIKLCDLADLSPEKYYITNIS 89 Query: 157 PWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKW 216 R LS E ++ + + QI LI PKI++ +G + N ++ GK Sbjct: 90 KC-ILKWRELSEEEKKVMKEYLDMQIALIKPKIIVALGPEVVTVLLNEES-NISDMRGKV 147 Query: 217 SNLCTPHSIIPTLATVHPQELIQYPLI--KK-----NTWHALITLKKAL 258 N I + T P + + + KK W+ L +K + Sbjct: 148 YNWE---GNIKVIPTYDPGYVKRVRGLDGKKARPAVEFWNDLKMIKTEI 193 >gi|229195830|ref|ZP_04322589.1| Uracil-DNA glycosylase superfamily [Bacillus cereus m1293] gi|228587603|gb|EEK45662.1| Uracil-DNA glycosylase superfamily [Bacillus cereus m1293] Length = 236 Score = 88.3 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 64/185 (34%), Gaps = 30/185 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I + R +++I+ P Sbjct: 49 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 108 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ ++ ++E I+PK+++ +GN D Sbjct: 109 KWREKKERNGEIIQKKYNRTPNQGEIVAHASLLDYELEKINPKLIVTLGNIGLQRLAGKD 168 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + + + L Sbjct: 169 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYHIFPTFHPASIFYNRGLLELIYEDLE 227 Query: 253 TLKKA 257 LK+ Sbjct: 228 KLKQY 232 >gi|218767547|ref|YP_002342059.1| hypothetical protein NMA0583 [Neisseria meningitidis Z2491] gi|121051555|emb|CAM07853.1| hypothetical protein NMA0583 [Neisseria meningitidis Z2491] Length = 245 Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 88/269 (32%), Gaps = 37/269 (13%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60 M S R L + L + + A + + Sbjct: 1 MLSARYLHLHEALGL---------------GPMWLKQAAAVLPPKNTPAPSAQARPQTVR 45 Query: 61 SPLVQQADSIAQKAC--SLHELKSLLRSFHDCHLCSTSLSTICATQTEG-------QDLM 111 + ++ + +A ++ L++ + + + L Sbjct: 46 AAPIRPSQPHNGQARLETMKALETAAVHTRKPAPETETPPPGLSDGIAPVPAASGITKLA 105 Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEM 171 ++ P D + G+ F GK G +LD +L+++ + +H + GN S + Sbjct: 106 VVSLCPPIEDAVYGQLFYGKAGVLLDNILKAVGLDAAYVHKTCWVKTAAVGNPMPSEAAI 165 Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231 E +M++++ +LF+G F N + Q + L P Sbjct: 166 ETATVSVMQELDGCRAPAVLFLG----QAFVNPERQAMIETL---------CGSRPFFII 212 Query: 232 VHPQELIQYPLIKKNTWHALITLKKALKN 260 HP L++ P +K W L LK+AL+ Sbjct: 213 DHPARLLRQPELKARAWQVLKQLKRALRQ 241 >gi|257459361|ref|ZP_05624472.1| uracil-DNA glycosylase family protein [Campylobacter gracilis RM3268] gi|257443214|gb|EEV18346.1| uracil-DNA glycosylase family protein [Campylobacter gracilis RM3268] Length = 218 Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 40/201 (19%), Positives = 68/201 (33%), Gaps = 24/201 (11%) Query: 71 AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQ-------------DLMIIGYTP 117 A+ +L LKS + C L T S+ + Q LMI+ P Sbjct: 29 ARFFKALDALKSATAECNLCELAKTRTSS--SEQNFKNFKTIKNFKTPANVKLMIVALAP 86 Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177 S S+ + LD++ +I+ S + P NR +S+ + C P Sbjct: 87 SSSEGFGC-GLEAEVAAALDQICAPK-----EIYFSFLIRCAVPQNRRISSEIILKCAPY 140 Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237 + +I+++ PKI+L +G N I + + P + Sbjct: 141 LTDEIKILKPKIVLCLGELCCKIVLRNGDLAGMDV---LHGSVFNEGGISFVPSFDPAFI 197 Query: 238 IQYPLIKKNTWHALITLKKAL 258 Q P + L +K L Sbjct: 198 AQNPSKAELFKEDLQKIKGLL 218 >gi|256847716|ref|ZP_05553161.1| uracil-DNA glycosylase superfamily protein [Lactobacillus coleohominis 101-4-CHN] gi|256715405|gb|EEU30381.1| uracil-DNA glycosylase superfamily protein [Lactobacillus coleohominis 101-4-CHN] Length = 218 Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 57/196 (29%), Gaps = 38/196 (19%) Query: 97 LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156 + +M++G P + +G PF G +G L KML + R ++I+ + Sbjct: 26 TGFVAGMGPMHPRVMLLGEAPGRQEAKTGIPFVGSSGKELMKMLALAGLTRDDVYITSVV 85 Query: 157 PWHP-----------------PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199 P NR + E+ P+ +I+ + P+I++ +GN + Sbjct: 86 RSRPFSIRQVQDRKTGAMVEKHPNRTPTKKEVLAYAPLFDWEIKTVQPQIIVPLGNTSLQ 145 Query: 200 FFFNNDAQKTYQNLGKWS----------------NLCTPHSIIPTLATVHPQELIQYPLI 243 A+ G HP + + Sbjct: 146 RLLGPTAKV-----GSLHGLPQKTTILESLPDDSGYEKGQHQYWVYPMYHPAAYLYARRL 200 Query: 244 KKNTWHALITLKKALK 259 + L+ Sbjct: 201 EPTVRKDWQEFGNWLQ 216 >gi|57242369|ref|ZP_00370308.1| DNA polymerase, bacteriophage-type, putative [Campylobacter upsaliensis RM3195] gi|315638581|ref|ZP_07893755.1| family 4 uracil-DNA glycosylase [Campylobacter upsaliensis JV21] gi|57017049|gb|EAL53831.1| DNA polymerase, bacteriophage-type, putative [Campylobacter upsaliensis RM3195] gi|315481205|gb|EFU71835.1| family 4 uracil-DNA glycosylase [Campylobacter upsaliensis JV21] Length = 202 Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 67/188 (35%), Gaps = 10/188 (5%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 + L+ + + C+ T + + + L I+ S ++N SG K Sbjct: 24 DRLDDFKTLRDKIATCTLCNFSKTRKKILMEERLKPCKLFILDTHASQNENESGILLQSK 83 Query: 132 TGNMLDKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 G L L+ I + R + + S I + + C P ++ +I+LI PKIL Sbjct: 84 KGKFLFNSLEKILNLSRDEFYFSYIFKCFSANKNDDFA--LHSCLPFLLNEIKLIKPKIL 141 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 L +G G+ LA+ + L + P K+ ++ Sbjct: 142 LCLGEYALKAL---GFSNFKALKGELFAYEDFF----ILASFDGEFLERNPSFKEEFFND 194 Query: 251 LITLKKAL 258 L LK L Sbjct: 195 LKKLKGFL 202 >gi|269839729|ref|YP_003324421.1| uracil-DNA glycosylase [Thermobaculum terrenum ATCC BAA-798] gi|269791459|gb|ACZ43599.1| Uracil-DNA glycosylase superfamily [Thermobaculum terrenum ATCC BAA-798] Length = 198 Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 46/199 (23%), Positives = 82/199 (41%), Gaps = 20/199 (10%) Query: 77 LHELKSLLRSFHDCHLCSTSLST-ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 L L S + + C L A G +M+IG P I+G+PFSG G + Sbjct: 4 LARLHSEILACRRCELEGLLPHPRPVAYGHMGARVMVIGQAPGVRTMIAGRPFSGPGGKL 63 Query: 136 LDKMLQSIEIMR----TQIHISMISPWHP------PGNRNLSNIEMEICRPIIMRQIELI 185 L + I +++ + ++ +P G+R S E+E+C P + R+IELI Sbjct: 64 LRGWIARAGIPLEEQDRRVYFTSLTRCYPGKAPKGKGDRKPSAREVELCSPFLQREIELI 123 Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL---IQYPL 242 P ++L +G+ F + +G+ + L HP + + +P Sbjct: 124 DPVLVLLVGSMAIERFLG--RMPLAEAVGQLFSRDGRWW----LPLPHPSGVSRWLNHPE 177 Query: 243 IKKNTWHALITLKKALKNL 261 + AL +++ L +L Sbjct: 178 HRALVEEALERMRELLSSL 196 >gi|229178036|ref|ZP_04305408.1| Uracil-DNA glycosylase superfamily [Bacillus cereus 172560W] gi|228605524|gb|EEK62973.1| Uracil-DNA glycosylase superfamily [Bacillus cereus 172560W] Length = 213 Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 63/184 (34%), Gaps = 30/184 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I++ R +++I+ P Sbjct: 26 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLIDFLERIDVTREEVYITSAVRSRPY 85 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E I PK+++ +GN + Sbjct: 86 KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKIHPKLIVTLGNIGLQRLTGKN 145 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + + Sbjct: 146 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYHVFPTFHPASIFYNRSLLELIHEDFE 204 Query: 253 TLKK 256 LK+ Sbjct: 205 KLKR 208 >gi|228990645|ref|ZP_04150610.1| Uracil-DNA glycosylase superfamily [Bacillus pseudomycoides DSM 12442] gi|228996743|ref|ZP_04156380.1| Uracil-DNA glycosylase superfamily [Bacillus mycoides Rock3-17] gi|229004410|ref|ZP_04162162.1| Uracil-DNA glycosylase superfamily [Bacillus mycoides Rock1-4] gi|228756842|gb|EEM06135.1| Uracil-DNA glycosylase superfamily [Bacillus mycoides Rock1-4] gi|228763062|gb|EEM11972.1| Uracil-DNA glycosylase superfamily [Bacillus mycoides Rock3-17] gi|228769171|gb|EEM17769.1| Uracil-DNA glycosylase superfamily [Bacillus pseudomycoides DSM 12442] Length = 215 Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 66/187 (35%), Gaps = 30/187 (16%) Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160 C E LM++G P +++ +G PFSG+ G L L+ I + R +++I+ P Sbjct: 30 CGQGPEKPKLMLVGEAPGETEIHNGIPFSGRAGKELMGFLERIGLTREEVYITSTVRSRP 89 Query: 161 P----------------GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204 NR + E+ I P++ ++E + +++ +GN Sbjct: 90 YIWREKRERSGQVAQKKYNRTPNQGEILIHAPLLDYEMEHVQAPVIVTLGNIALKRLVGP 149 Query: 205 DAQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 D K G+ + I T HP + + + L Sbjct: 150 DK-KITDVHGQLLQQPVRRLKNNQSTDFIWTEKIYNIFPTFHPASIFYNRGLLDLIYEDL 208 Query: 252 ITLKKAL 258 L K + Sbjct: 209 EKLGKYI 215 >gi|313669095|ref|YP_004049379.1| hypothetical protein NLA_18180 [Neisseria lactamica ST-640] gi|313006557|emb|CBN88021.1| hypothetical protein NLA_18180 [Neisseria lactamica 020-06] Length = 245 Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 91/271 (33%), Gaps = 41/271 (15%) Query: 1 MTSKRILSQEQILTIAL-FYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNI--- 56 M S R L + L + + + P N Q + +++ +A + Sbjct: 1 MLSARYLHLHEALGLGPMWLKQA---AAVLPPKNTPAPSVQARPQTVRAAPIRPSQPHNV 57 Query: 57 -------RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD 109 + + + V + L + + + A Sbjct: 58 QARLETMKALETAAVHTRKPAPETETPLPGVSDGIA-------------PVPAASGI-TK 103 Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI 169 L ++ P D + G+ F GK G +LD +L+++ + +H + GN S Sbjct: 104 LAVVSLCPPIEDAVYGQLFHGKAGILLDNILKAVGLDAAYVHKTCWVKTAAVGNPMPSEQ 163 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 +E I+R+++ +LF+G F + Q + L + P Sbjct: 164 AIENALGQIIRELDGCRAPAVLFLG----QAFVQPERQTMIETL---------CAGRPFF 210 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 HP L++ P +K W L LK AL+ Sbjct: 211 IIDHPARLLRQPELKARAWQVLKQLKHALRQ 241 >gi|261393212|emb|CAX50831.1| putative DNA glycosylase [Neisseria meningitidis 8013] gi|325141568|gb|EGC64034.1| putative uracil-DNA glycosylase, family 4 [Neisseria meningitidis 961-5945] gi|325197629|gb|ADY93085.1| putative uracil-DNA glycosylase, family 4 [Neisseria meningitidis G2136] gi|325207468|gb|ADZ02920.1| putative uracil-DNA glycosylase, family 4 [Neisseria meningitidis NZ-05/33] Length = 245 Score = 87.5 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 88/267 (32%), Gaps = 33/267 (12%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60 M S R L + L + + +A K A +R Sbjct: 1 MLSARYLHLHEALGLGPMWLK------------QAAAVLPPKNTPATPAQARPQTVRAAP 48 Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEG-------QDLMII 113 Q + A+ ++ L++ + + + L ++ Sbjct: 49 IRPSQPHNGQARL-ETMKALETAAVHTRKPAPETETPPPGLSDGIAPVPAASGITKLAVV 107 Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173 P D + G+ F GK G +LD +L+++ + +H + GN S +E Sbjct: 108 SLCPPIEDAVYGQLFYGKAGVLLDNILKAVGLDAAYVHKTCWVKTAAVGNPMPSEAAIET 167 Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 +M++++ +LF+G F + Q + L P H Sbjct: 168 ATVSVMQELDGCRAPAVLFLG----QAFVQPERQTMIETL---------CGSRPFFIIDH 214 Query: 234 PQELIQYPLIKKNTWHALITLKKALKN 260 P L++ P +K W L LK+AL+ Sbjct: 215 PARLLRQPELKARAWQVLKQLKRALRQ 241 >gi|239818041|ref|YP_002946951.1| uracil-DNA glycosylase superfamily [Variovorax paradoxus S110] gi|239804618|gb|ACS21685.1| Uracil-DNA glycosylase superfamily [Variovorax paradoxus S110] Length = 260 Score = 87.5 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 58/147 (39%), Gaps = 4/147 (2%) Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI 169 +++ P ++D G+PF+G G +LD ML+++++ + ++ G Sbjct: 112 WLVVADMPPEADGRHGEPFAGDAGKLLDNMLRALKLHDGTTPVHLMRTHR--GVGAGQPG 169 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 ++P ++L +G A + G+ L + S +P + Sbjct: 170 SPRPMDEAFAEHAAALAPSLVLAMGPLAAQSLMQ-SADPLGKLRGRAVPLPS-DSGVPVV 227 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKK 256 AT HP L++ P K W L + Sbjct: 228 ATYHPAYLLRNPADKARAWADLCLAAE 254 >gi|323466318|gb|ADX70005.1| Uracil-DNA glycosylase family protein [Lactobacillus helveticus H10] Length = 278 Score = 87.1 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 60/189 (31%), Gaps = 31/189 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 + + LMI+G P ++ ++ PFSG G LDK L+ I + R Q++I+ P Sbjct: 85 GSGPKHPLLMIVGEAPGRNEIVNNIPFSGDAGKELDKSLKQIGLSRDQVYITSAVRSRPF 144 Query: 162 G-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204 NR + E+ P + +I P+I++ +GN Sbjct: 145 SVKKVFSKRENKEVIKRPNRKPTKKEVLAHAPFLDYEISYADPQIIVALGNTGLERLLGP 204 Query: 205 DAQKTYQNLGKWSN-------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 K GK + HP + + + Sbjct: 205 -GHKISAEHGKVIENTPILELNTAKDGYVWSKKKYTVIPEYHPAAVFYNRKLSDDIVKDW 263 Query: 252 ITLKKALKN 260 +K + Sbjct: 264 EVIKPYIDK 272 >gi|161507701|ref|YP_001577657.1| DNA polymerase [Lactobacillus helveticus DPC 4571] gi|160348690|gb|ABX27364.1| DNA polymerase [Lactobacillus helveticus DPC 4571] Length = 219 Score = 87.1 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 61/189 (32%), Gaps = 31/189 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 + + LMI+G P ++ ++ PFSG G LDK L+ I + R Q++I+ P Sbjct: 26 GSGPKHPLLMIVGEAPGRNEIVNNIPFSGDAGKELDKSLKQIGLSRDQVYITSAVRSRPF 85 Query: 162 G-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204 NR + E+ P + +I P+I++ +GN Sbjct: 86 SVKKVFSKRENKEVIKRPNRKPTKKEVLAHAPFLDYEISYTDPQIIVALGNTGLERLLGP 145 Query: 205 DAQKTYQNLGKWSN-------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 K GK + + HP + + + Sbjct: 146 -GHKISAEHGKVIDNTPILELNTAKDGYVWSKKKYTVIPEYHPAAVFYNRKLSDDIVKDW 204 Query: 252 ITLKKALKN 260 +K + Sbjct: 205 EVIKPYIDK 213 >gi|116629449|ref|YP_814621.1| Uracil-DNA glycosylase [Lactobacillus gasseri ATCC 33323] gi|311110903|ref|ZP_07712300.1| putative phage SPO1 DNA polymerase-related protein [Lactobacillus gasseri MV-22] gi|116095031|gb|ABJ60183.1| Uracil-DNA glycosylase [Lactobacillus gasseri ATCC 33323] gi|311066057|gb|EFQ46397.1| putative phage SPO1 DNA polymerase-related protein [Lactobacillus gasseri MV-22] Length = 211 Score = 87.1 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 57/185 (30%), Gaps = 31/185 (16%) Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160 LMIIG P + S PF G +G L K L SI + R ++I+ P Sbjct: 25 FGAGPAHPKLMIIGEAPGREEIESLIPFHGASGKELMKSLASIGLKREDVYITSAVRSRP 84 Query: 161 PG-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 NR + E+ P++ ++ PK+++ +G + + Sbjct: 85 YSVKKVFSKKENKEVTKYPNRKPTKKEILAHAPLLDFELRYAQPKVIVTVGTTALSRLLD 144 Query: 204 NDAQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 + + + GK + HP + + Sbjct: 145 HK-YEISKVHGKIIKNTSILELNDKKDGYVWSKEKYTVVPQYHPAAVFYNRKLTDIIAQD 203 Query: 251 LITLK 255 + +K Sbjct: 204 WLNVK 208 >gi|319409811|emb|CBY90119.1| putative DNA glycosylase [Neisseria meningitidis WUE 2594] Length = 245 Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 88/269 (32%), Gaps = 37/269 (13%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60 M S R L + L + + A + + Sbjct: 1 MLSARYLHLHEALGL---------------GPMWLKQAAAVLPPKNTPAPSAQARPQTVR 45 Query: 61 SPLVQQADSIAQKAC--SLHELKSLLRSFHDCHLCSTSLSTICATQTEG-------QDLM 111 + ++ + +A ++ L++ + + + L Sbjct: 46 AAPIRPSQPHNGQARLETMKALETAAVHTRKPAPETETPPPGLSDGIAPVPAASGITKLA 105 Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEM 171 ++ P D + G+ F GK G +LD +L+++ + +H + GN S + Sbjct: 106 VVSLCPPIEDAVYGQLFYGKAGVLLDNILKAVGLDAAYVHKTCWVKTAAVGNPMPSEAAI 165 Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231 E +M++++ +LF+G F N + Q + L P Sbjct: 166 ETATVSVMQELDGCRAPAVLFLG----QAFANPERQAMIETL---------CGSRPFFII 212 Query: 232 VHPQELIQYPLIKKNTWHALITLKKALKN 260 HP L++ P +K W L LK+AL+ Sbjct: 213 DHPARLLRQPELKARAWQVLKQLKRALRQ 241 >gi|325131515|gb|EGC54222.1| putative uracil-DNA glycosylase, family 4 [Neisseria meningitidis M6190] Length = 245 Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 88/267 (32%), Gaps = 33/267 (12%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60 M S R L + L + + +A K A +R Sbjct: 1 MLSARYLHLHEALGLGPMWLK------------QAAAVLPPKNTPATPAQARPQTVRAAP 48 Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEG-------QDLMII 113 Q + A+ ++ L++ + + + L ++ Sbjct: 49 IRPSQPHNGQARL-ETMKALETAAVPTRKPAPETETPPPGLSDGIAPVPAASGITKLAVV 107 Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173 P D + G+ F GK G +LD +L+++ + +H + GN S +E Sbjct: 108 SLCPPIEDAVYGQLFYGKAGVLLDNILKAVGLDAAYVHKTCWVKTAAVGNPMPSEAAIET 167 Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 +M++++ +LF+G F + Q + L P H Sbjct: 168 ATVSVMQELDGCRAPAVLFLG----QAFVQPERQTMIETL---------CGSRPFFIIDH 214 Query: 234 PQELIQYPLIKKNTWHALITLKKALKN 260 P L++ P +K W L LK+AL+ Sbjct: 215 PARLLRQPELKARAWQVLKQLKRALRQ 241 >gi|227892622|ref|ZP_04010427.1| uracil-DNA glycosylase [Lactobacillus ultunensis DSM 16047] gi|227865607|gb|EEJ73028.1| uracil-DNA glycosylase [Lactobacillus ultunensis DSM 16047] Length = 218 Score = 86.3 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 59/187 (31%), Gaps = 31/187 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 + LMI+G P ++ ++ PFSG G LDK L+ I + R Q++I+ P Sbjct: 26 GSGPRYPLLMIVGEAPGRNEIVNNIPFSGDAGKELDKSLKQIGLTRDQVYITSAVRSRPY 85 Query: 162 G-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204 NR + E+ P + +I PK+++ +GN Sbjct: 86 SIKKVFSKRENKEVTKYPNRKPTKKEILAHAPFLDYEIAYAQPKLIVALGNTGLERLIGP 145 Query: 205 DAQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 K GK HP + + K+ Sbjct: 146 -GHKISAEHGKVIKNTSILKLNKQKDGYIWSEEKYTIFPEYHPAAVFYNRKLAKDIKKDW 204 Query: 252 ITLKKAL 258 +K + Sbjct: 205 EVIKPFI 211 >gi|238852599|ref|ZP_04643009.1| uracil-DNA glycosylase [Lactobacillus gasseri 202-4] gi|238834745|gb|EEQ26972.1| uracil-DNA glycosylase [Lactobacillus gasseri 202-4] Length = 211 Score = 86.3 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 57/185 (30%), Gaps = 31/185 (16%) Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160 LMIIG P + S PF G +G L K L SI + R ++I+ P Sbjct: 25 FGAGPAHPKLMIIGEAPGREEIESLIPFHGASGEELMKSLASIGLKREDVYITSAVRSRP 84 Query: 161 PG-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 NR + E+ P++ ++ PK+++ +G + + Sbjct: 85 YSVKKVFSKKENKEVTKYPNRKPTKKEILAHAPLLDFELRYAQPKVIVTVGTTALSRLLD 144 Query: 204 NDAQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 + + + GK + HP + + Sbjct: 145 HK-YEISKVHGKIIKNTSILELNDKKDGYVWSKEKYTVVPQYHPAAVFYNRKLTDIIAQD 203 Query: 251 LITLK 255 + +K Sbjct: 204 WLNVK 208 >gi|255068558|ref|ZP_05320413.1| 4, uracil-DNA glycosylase family [Neisseria sicca ATCC 29256] gi|255047194|gb|EET42658.1| 4, uracil-DNA glycosylase family [Neisseria sicca ATCC 29256] Length = 264 Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 92/288 (31%), Gaps = 53/288 (18%) Query: 1 MTSKRILSQEQILTIALFYAD--------SGVYWVFDEPNNEATYESQRK---------- 42 M S R L Q L + + + +G +P A + Sbjct: 1 MLSSRYLHLHQALGLGPMWLNRHAKVIPPAG-DASVTQPQKPAAAQVAEAVRTISASAHH 59 Query: 43 -----------EKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCH 91 EK+ + PI + A + + + + + Sbjct: 60 ARMAAMAAVQHEKTASATTPPIPSTAAPVDAPFPSARTHSAPENTGQAPAATVSD----D 115 Query: 92 LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH 151 L + ++II P+ D++ G+ F G G +LD ML +I + Q + Sbjct: 116 LPRLQTEARPSE------VIIISICPATEDSLHGQLFHGAVGVLLDNMLAAIRLTPQQAY 169 Query: 152 ISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQ 211 + P + + ++ +++ P + R++ K +L +G + Sbjct: 170 KTSWVKAAPVFSPHPTDEQIQAELPQLARELADTQAKAVLLVGQIFEKPELAP------- 222 Query: 212 NLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 + ++ L HP L++ P +K W L +++ L Sbjct: 223 ----LIDTLCGNTPRFILP--HPARLLRQPQLKAKAWQVLKQVRQILN 264 >gi|326939246|gb|AEA15142.1| DNA polymerase [Bacillus thuringiensis serovar chinensis CT-43] Length = 213 Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 66/184 (35%), Gaps = 30/184 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG++G L L+ I + R +++I+ P Sbjct: 26 GQGPENPKFMLLGEAPGETEIHNGIPFSGRSGKQLMGFLERIHVTREEVYITSAVRSRPY 85 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E I+ ++++ +GN + Sbjct: 86 KWREKKERNGESIQKKYNRTPNQGEIVAHAPLLDYELEKINSRLIVTLGNIGLQRLTGKN 145 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ + T HP + + + + L Sbjct: 146 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSENEYHVFPTFHPASIFYNRSLLELIYEDLE 204 Query: 253 TLKK 256 LK+ Sbjct: 205 KLKR 208 >gi|228938740|ref|ZP_04101343.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971622|ref|ZP_04132244.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978231|ref|ZP_04138608.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis Bt407] gi|228781248|gb|EEM29449.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis Bt407] gi|228788035|gb|EEM35992.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228820915|gb|EEM66937.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 216 Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 66/184 (35%), Gaps = 30/184 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG++G L L+ I + R +++I+ P Sbjct: 29 GQGPENPKFMLLGEAPGETEIHNGIPFSGRSGKQLMGFLERIHVTREEVYITSAVRSRPY 88 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E I+ ++++ +GN + Sbjct: 89 KWREKKERNGESIQKKYNRTPNQGEIVAHAPLLDYELEKINSRLIVTLGNIGLQRLTGKN 148 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ + T HP + + + + L Sbjct: 149 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSENEYHVFPTFHPASIFYNRSLLELIYEDLE 207 Query: 253 TLKK 256 LK+ Sbjct: 208 KLKR 211 >gi|121634213|ref|YP_974458.1| hypothetical protein NMC0346 [Neisseria meningitidis FAM18] gi|120865919|emb|CAM09656.1| hypothetical protein NMC0346 [Neisseria meningitidis FAM18] gi|325201488|gb|ADY96942.1| putative uracil-DNA glycosylase, family 4 [Neisseria meningitidis M01-240149] Length = 244 Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 88/269 (32%), Gaps = 37/269 (13%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITN----- 55 M S R L + L + + V N AT R + + I+P Sbjct: 1 MLSARYLHLHEALGLGPMWLKQAA-AVLPPKNTPATPAQARPQTVRAAPIRPSQPHNGQA 59 Query: 56 ----IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLM 111 ++ + + V + L L + + A L Sbjct: 60 RLETMKALETAAVPTRKPAPETETPLPGLSDGIA-------------PVPAASGI-TKLA 105 Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEM 171 ++ P D + G+ F GK G +LD +L+++ + +H + GN S + Sbjct: 106 VVSLCPPIEDAVYGQLFHGKAGVLLDNILKAVGLDAAYVHKTSWVKTAAVGNPMPSEQAV 165 Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231 I R+++ +LF+G F + Q + L P Sbjct: 166 ANALGQIARELDGCRAPAVLFLG----QAFVQPERQTMIETL---------CGSRPFFII 212 Query: 232 VHPQELIQYPLIKKNTWHALITLKKALKN 260 HP L++ P +K W L LK AL+ Sbjct: 213 DHPARLLRQPELKARNWQVLKQLKHALQA 241 >gi|119509115|ref|ZP_01628266.1| Phage SPO1 DNA polymerase-related protein [Nodularia spumigena CCY9414] gi|119466281|gb|EAW47167.1| Phage SPO1 DNA polymerase-related protein [Nodularia spumigena CCY9414] Length = 139 Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 1/112 (0%) Query: 62 PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121 P + ++ EL H C L + +M+IG P ++ Sbjct: 22 PTNAKIPITPGTYNNITELTQDCNQCHRCGLGDNRTHAVVGRGHLQAPIMLIGEAPGQNE 81 Query: 122 NISGKPFSGKTGNMLDKMLQSIE-IMRTQIHISMISPWHPPGNRNLSNIEME 172 + +G PF G++G +L+K+L S+ I+I+ I+ PP + ++ Sbjct: 82 DETGLPFVGRSGQLLEKILASVNLTTEQDIYIANINKCRPPKTERPTLMKWR 133 >gi|16081596|ref|NP_393955.1| hypothetical protein Ta0477 [Thermoplasma acidophilum DSM 1728] gi|10639647|emb|CAC11619.1| conserved hypothetical protein [Thermoplasma acidophilum] Length = 229 Score = 86.0 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 66/223 (29%), Gaps = 40/223 (17%) Query: 75 CSLHELKSLLRSFHDCH-LCSTSL----------------STICATQTEGQDLMIIGYTP 117 + E+ L + C L + L+I+G P Sbjct: 8 ADIREMNDRLIACERCPRLVEFRKAVVGRDKRFRGETYWARPVPGYGDINGRLLIVGLAP 67 Query: 118 SDS-DNISGKPFSGKT-GNMLDKMLQSIEIMRTQI-------------HISMISPWHPPG 162 + S N +G+ F+G + L L I +I+ PP Sbjct: 68 AASGGNRTGRVFTGDKSSDFLVSCLHEAGITNQPTSERRDDGLIYYDAYITAAVKCVPPD 127 Query: 163 NRNLSNIEMEICRPIIMRQI-ELISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSN 218 N E+E C + +I + + K++L +G + A+ + Sbjct: 128 N-KPLPEEIENCSVYLRSEIGFMKNLKVILVLGQIALQAVVRLIADPAEPRSRYR-FVHG 185 Query: 219 LCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + I + + HP + K + L K +K + Sbjct: 186 AVYSMNGIRVVCSYHPSP--RNVNTGKLKRSDFVDLLKKVKEM 226 >gi|261379409|ref|ZP_05983982.1| uracil-DNA glycosylase, family 4 [Neisseria subflava NJ9703] gi|284797858|gb|EFC53205.1| uracil-DNA glycosylase, family 4 [Neisseria subflava NJ9703] Length = 255 Score = 86.0 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 43/268 (16%), Positives = 85/268 (31%), Gaps = 23/268 (8%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRH-I 59 M S R L + L + + + + P + R + Q + + Sbjct: 1 MLSSRYLHLHEALGLGPMWLNRNAKIIHAAPQTATSAAPVRPKTIAADTAQTVRTLSAGA 60 Query: 60 HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD-------LMI 112 H + ++ ++ ++ + + + D +M+ Sbjct: 61 HQARTAAIATAQAAKPAVRAPEAAPKAIAETPTK--TEKAAHSDNLPRLDVTIRPSEIMV 118 Query: 113 IGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEME 172 + PS D++ G FSG G +LD +L +I + Q H + P + Sbjct: 119 VSICPSTEDSLHGTLFSGDVGTLLDNILAAIGLKPEQAHKTAWVKTAPVFTALPDAEHIR 178 Query: 173 ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATV 232 + ++ + +LF+G + +G + LC P Sbjct: 179 SELAEMQNELTASQARAVLFLGKI----------FDSPDMIGLMNELCAE---RPHFVIP 225 Query: 233 HPQELIQYPLIKKNTWHALITLKKALKN 260 HP L+ P +K W L LK+ L Sbjct: 226 HPARLLMQPQLKAQAWQILKPLKQLLAK 253 >gi|325957077|ref|YP_004292489.1| Uracil-DNA glycosylase family protein [Lactobacillus acidophilus 30SC] gi|325333642|gb|ADZ07550.1| Uracil-DNA glycosylase family protein [Lactobacillus acidophilus 30SC] Length = 215 Score = 86.0 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 59/189 (31%), Gaps = 31/189 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 + + LMIIG ++ ++ PFSG G L+K L I + R ++I+ P Sbjct: 26 GSGPKHPKLMIIGEALGRNEIVNNIPFSGDAGKELNKSLAQIGLTRDDVYITSAVRSRPY 85 Query: 162 G-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204 NR + E+ P + +I+ PK+++ +GN Sbjct: 86 AIKKVFSKRENKEVTKYPNRKPTKKEVLAHAPFLDYEIDYAQPKLIVALGNTGLERLLGL 145 Query: 205 DAQKTYQNLGKWSN-------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 K + GK HP + + + Sbjct: 146 -GHKISEEHGKVIENTPILRLNPQKDGYVWSKQRYTIFPEYHPAAVFYNRKLSDDIIKDW 204 Query: 252 ITLKKALKN 260 +K L+ Sbjct: 205 NVIKPYLEK 213 >gi|223937591|ref|ZP_03629494.1| Uracil-DNA glycosylase superfamily [bacterium Ellin514] gi|223893754|gb|EEF60212.1| Uracil-DNA glycosylase superfamily [bacterium Ellin514] Length = 295 Score = 85.6 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 66/166 (39%), Gaps = 12/166 (7%) Query: 80 LKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKM 139 L ++ C LC + + ++++G P D + I G+PF+ G L K Sbjct: 100 LDEHVQRLRACVLCPAMHKPVVSGGAVMSKVLLVGQAPGDKEPIMGRPFAWTAGKTLFKW 159 Query: 140 LQSIEIM-----RTQIHISMISPWHP-----PGNRNLSNIEMEICRPIIMRQIELISPKI 189 + M R I+++ + P G+R S IE++ C + R++E++ P++ Sbjct: 160 FNDVAGMSEVQFRASIYMAAVCRCFPGKKPTGGDRVPSPIEVQTCSGWLKREMEILKPEL 219 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 ++ +G F + +G+ + + HP Sbjct: 220 VIPVGKLAIEQFIPPRKLD--EIIGRKMRVTYAGHEFDLIPLPHPS 263 >gi|117929110|ref|YP_873661.1| uracil-DNA glycosylase superfamily protein [Acidothermus cellulolyticus 11B] gi|117649573|gb|ABK53675.1| Uracil-DNA glycosylase superfamily [Acidothermus cellulolyticus 11B] Length = 312 Score = 85.6 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 35/242 (14%), Positives = 73/242 (30%), Gaps = 45/242 (18%) Query: 38 ESQRKEKSIDSAIQPITNIRHIHSPLVQQAD--SIAQKACSLHELKSLLRSFHDCHLCST 95 + + P+ AD +A A L EL + C Sbjct: 44 SRGARPRDPARLGTPVARSAADDPVARSAADVSRLAASAEDLAELDARSSCCRACPRLVA 103 Query: 96 SL------------------STICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNM 135 + ++++G P+ N +G+ F+G ++G+ Sbjct: 104 WREKVAAQRRRAFATETYWGRPVPGFGDPAARIVVVGLAPAAHGGNRTGRIFTGDRSGDW 163 Query: 136 LDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSNIEMEICRPIIMRQI 182 L L R + + PP + +E + CRP ++R++ Sbjct: 164 LFAALYRAGFARQPTSERVDDGQRLDGVRLVAVVRCAPP-ANKPTPVERDTCRPWLVREL 222 Query: 183 ELISPKILLFIGNKTKNFF------FNNDAQKTYQNLGKWSNLCT---PHSIIPTLATVH 233 EL+ ++L+ +G + + + G ++ + LA+ H Sbjct: 223 ELLPARVLVVLGGFAWQSLPPTLARLGFLIPRPFPSFGHGRSVTIAHPDGRRLHLLASYH 282 Query: 234 PQ 235 P Sbjct: 283 PS 284 >gi|301053166|ref|YP_003791377.1| uracil-DNA glycosylase family protein [Bacillus anthracis CI] gi|300375335|gb|ADK04239.1| uracil-DNA glycosylase family protein [Bacillus cereus biovar anthracis str. CI] Length = 213 Score = 85.6 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 66/185 (35%), Gaps = 30/185 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E + +++G P +++ +G PFSG+ G L L+ I + R +++I+ P Sbjct: 26 GQGPENPEFILLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 85 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E ++PK+++ +GN D Sbjct: 86 KWREKKERNGSIIQKKYNRTPNQGEIVAHAPLLDYELEKLNPKLIVTLGNIGLQRLTGKD 145 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + + + L Sbjct: 146 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYHIFPTFHPASIFYNRSLLELIYEDLE 204 Query: 253 TLKKA 257 LK+ Sbjct: 205 KLKQY 209 >gi|163782682|ref|ZP_02177679.1| uracil-DNA glycosylase [Hydrogenivirga sp. 128-5-R1-1] gi|159882255|gb|EDP75762.1| uracil-DNA glycosylase [Hydrogenivirga sp. 128-5-R1-1] Length = 229 Score = 85.6 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 71/225 (31%), Gaps = 43/225 (19%) Query: 75 CSLHELKSLLRSFHDCHL-------------CSTSL-----STICATQTEGQDLMIIGYT 116 L LK + S C + + +L+I+G Sbjct: 2 KELDLLKEEIISCQRCPRISEYIRDVARKKVKRFAKEDYWGKPLPGFGDPKAELLIVGLA 61 Query: 117 PSDS-DNISGKPFSGK-TGNMLDKMLQSIEIMRTQI-------------HISMISPWHPP 161 P+ N +G+ F+G +GN L + L +I+ + PP Sbjct: 62 PAAHGGNRTGRMFTGDSSGNWLARALYETGFANKPESVNKDDGLDLKGAYITAVVRCAPP 121 Query: 162 GNRNLSNIEMEICRPIIMRQIELIS-PKILLFIGNKTKNFFF--NNDAQKTYQNLGKWSN 218 N + EME C ++R++E++ K++L +G+ T Q G Sbjct: 122 EN-KPTKEEMENCNTFLIRELEILKEVKVILCLGSIALKGTLMALKKLYPTAQLRGIKFG 180 Query: 219 ----LCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 + + HP Q + W + + K ++ Sbjct: 181 HNFVYKPEGLPYTLMTSYHPS--KQNTQTGRLKWEDWVGVFKRVR 223 >gi|229189710|ref|ZP_04316724.1| Uracil-DNA glycosylase superfamily [Bacillus cereus ATCC 10876] gi|228593759|gb|EEK51564.1| Uracil-DNA glycosylase superfamily [Bacillus cereus ATCC 10876] Length = 213 Score = 84.4 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 63/184 (34%), Gaps = 30/184 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I++ R +++I+ P Sbjct: 26 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMDFLERIDVTREEVYITSAVRSRPY 85 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E I PK+++ +GN + Sbjct: 86 KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKIHPKLIVTLGNIGLQRLTGKN 145 Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 K G+ T HP + + + Sbjct: 146 K-KITDIHGQLLKQPIQKLKDMQSAEFTWSEKEYHVFPTFHPASIFCNRSLLELIHEDFE 204 Query: 253 TLKK 256 LK+ Sbjct: 205 KLKR 208 >gi|295693158|ref|YP_003601768.1| uracil-DNA glycosylase family protein [Lactobacillus crispatus ST1] gi|295031264|emb|CBL50743.1| Uracil-DNA glycosylase family protein [Lactobacillus crispatus ST1] Length = 219 Score = 84.4 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 59/184 (32%), Gaps = 31/184 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP- 160 + + LMI+G P ++ ++ PFSG G LDK L+ I + R Q++I+ P Sbjct: 26 GSGPQHPLLMIVGEAPGRNEIVNNIPFSGDAGKELDKSLEQIGLTRDQVYITSAVRSRPF 85 Query: 161 ----------------PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204 NR + E+ P + +I+ PK+++ +GN Sbjct: 86 AIKKVFSKRENKEVIKYPNRKPTKKEILAHAPFLDFEIDYAQPKLIVALGNTGLERLLG- 144 Query: 205 DAQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 K G+ HP + + + Sbjct: 145 SGHKISAEHGQVIKNTPILRLNETKDGYIWSKERYTIFPEYHPAAVFYNRKLTDDIIKDW 204 Query: 252 ITLK 255 +K Sbjct: 205 DKIK 208 >gi|256843362|ref|ZP_05548850.1| DNA polymerase [Lactobacillus crispatus 125-2-CHN] gi|293381192|ref|ZP_06627200.1| uracil-DNA glycosylase, family 4 [Lactobacillus crispatus 214-1] gi|256614782|gb|EEU19983.1| DNA polymerase [Lactobacillus crispatus 125-2-CHN] gi|290922232|gb|EFD99226.1| uracil-DNA glycosylase, family 4 [Lactobacillus crispatus 214-1] Length = 219 Score = 84.4 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 58/184 (31%), Gaps = 31/184 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP- 160 + + LMI+G P ++ ++ PFSG G LDK L+ I + R Q++I+ P Sbjct: 26 GSGPQHPLLMIVGEAPGRNEIVNNIPFSGDAGKELDKSLKQIGLTRDQVYITSAVRSRPF 85 Query: 161 ----------------PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204 NR + E+ + +I+ PK+++ +GN Sbjct: 86 AIKKVFSKRENKEVIKYPNRKPTKKEILAHAHFLDFEIDYAQPKLIVALGNTGLERLLG- 144 Query: 205 DAQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 K G+ HP + + + Sbjct: 145 SGHKISAEHGQVIKNTPILRLNETKDGYIWSKERYTIFPEYHPAAVFYNRKLTDDIIKDW 204 Query: 252 ITLK 255 +K Sbjct: 205 DKIK 208 >gi|257869030|ref|ZP_05648683.1| uracil-DNA glycosylase [Enterococcus gallinarum EG2] gi|257803194|gb|EEV32016.1| uracil-DNA glycosylase [Enterococcus gallinarum EG2] Length = 215 Score = 84.4 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 26/182 (14%), Positives = 55/182 (30%), Gaps = 30/182 (16%) Query: 99 TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158 + LMI+G P ++ + PFSG+ G L L + + R +++I+ Sbjct: 23 FVPGQGPLHPKLMIVGEAPGRTEIENFIPFSGQAGKELMASLALVGLTREEVYITSAVRS 82 Query: 159 HP-----------------PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 P NR + E+ + P++ +I+ + P ++ +GN Sbjct: 83 RPYSIKERINKRSGAHEVVHPNRTPTKKEVLLHAPLLDYEIQKVDPPLIATVGNIGLQRL 142 Query: 202 FNNDAQKTYQNLGKWS------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249 + G+ + HP + + + Sbjct: 143 LG-NRYSITNVHGQPIRSAIQQLNAEKNGYTWSDKQYLIVPMYHPAAIFYNRTLAERIHQ 201 Query: 250 AL 251 Sbjct: 202 DW 203 >gi|58337558|ref|YP_194143.1| DNA polymerase [Lactobacillus acidophilus NCFM] gi|227904199|ref|ZP_04022004.1| uracil-DNA glycosylase [Lactobacillus acidophilus ATCC 4796] gi|58254875|gb|AAV43112.1| DNA polymerase [Lactobacillus acidophilus NCFM] gi|227868218|gb|EEJ75639.1| uracil-DNA glycosylase [Lactobacillus acidophilus ATCC 4796] Length = 219 Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 59/189 (31%), Gaps = 31/189 (16%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 + + LM++G P ++ ++ PFSG G L+K L+ I + R +++I+ P Sbjct: 26 GSGPKHPLLMLVGEAPGRNEIVNNIPFSGDAGKELNKSLEQIGLTRDEVYITSAVRSRPY 85 Query: 162 G-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204 NR + E+ P + +I+ PK+++ +G+ Sbjct: 86 AIKKTFSKRENKEVTKYPNRKPTKKEILAHGPFLDYEIDYAQPKLIVALGSTGLERLLG- 144 Query: 205 DAQKTYQNLGKWSN-------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 K + G HP + + Sbjct: 145 SGHKISEEHGTVIENTPILKLNSAKDGYIWSKERYTIFPEYHPAAIFYNRKLTDIIVKDW 204 Query: 252 ITLKKALKN 260 +K L Sbjct: 205 EVIKPYLAK 213 >gi|240127419|ref|ZP_04740080.1| hypothetical protein NgonS_02017 [Neisseria gonorrhoeae SK-93-1035] gi|268685795|ref|ZP_06152657.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] gi|268626079|gb|EEZ58479.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] Length = 245 Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 86/267 (32%), Gaps = 33/267 (12%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60 M S R L + L + + + + + + Q Sbjct: 1 MLSARYLHLHEALGLGPMWL-------------KQAAAVLPPKNTPATPAQARPQTVRAA 47 Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEG-------QDLMII 113 + Q ++ + ++ L++ + + + L ++ Sbjct: 48 TIRPSQPHNVQARLETMKALETAAVHTRKPAPETETPPPGLSDGIAPVPAASGITKLAVV 107 Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173 P D + G+ F GK G +LD +L++ + +H + GN S + Sbjct: 108 SLCPPIEDAVYGQLFHGKAGILLDNILKAAGLDAAYVHKTCWVKTAAVGNPMPSEQAVAD 167 Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 I R+++ +LF+G F N + Q + L P H Sbjct: 168 ALGQIARELDGCRAPAVLFLG----QAFVNLERQAMIETL---------CGSRPFFIIDH 214 Query: 234 PQELIQYPLIKKNTWHALITLKKALKN 260 P L++ P +K W L LK+AL+ Sbjct: 215 PARLLRQPELKARNWQVLKQLKRALRQ 241 >gi|297565432|ref|YP_003684404.1| Uracil-DNA glycosylase superfamily [Meiothermus silvanus DSM 9946] gi|296849881|gb|ADH62896.1| Uracil-DNA glycosylase superfamily [Meiothermus silvanus DSM 9946] Length = 221 Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 39/188 (20%), Positives = 74/188 (39%), Gaps = 28/188 (14%) Query: 99 TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158 + +M IG+ PS +D +G+P++G +G + D++L R ++I+ + Sbjct: 18 PVAGAGNPDSPVMFIGHNPSGTDTQTGRPYTGPSGEIFDELLAQAGFSRDDVYITNLVKC 77 Query: 159 HPPGNRN-------LSNIEMEICRP-IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210 N + E++ P + +I++I PK ++ +G T F D + T Sbjct: 78 WLWKEENGIKVNRTPTAKEIKSWVPAWLKPEIDIIQPKAIVCLGGPTAQHFLGKDFKITL 137 Query: 211 QNLGKWSNLCTP------HSIIP-----TLATVHPQELIQ--------YPLIKKNTWHAL 251 Q GKW + +P + P LI YP + N L Sbjct: 138 QG-GKWLEVPPESPYLKLAGSLPSPKPLIMGIPQPSYLIHIREHSPESYPAARANMVADL 196 Query: 252 ITLKKALK 259 + ++ L+ Sbjct: 197 LKVEAVLE 204 >gi|91790448|ref|YP_551400.1| phage SPO1 DNA polymerase-like protein [Polaromonas sp. JS666] gi|91699673|gb|ABE46502.1| phage SPO1 DNA polymerase-related protein [Polaromonas sp. JS666] Length = 260 Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 33/248 (13%), Positives = 78/248 (31%), Gaps = 20/248 (8%) Query: 19 YADSGVY-WVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSP-----LVQQADSIAQ 72 + GV W+ P+ T +++ + +H P V++ AQ Sbjct: 13 LREMGVRVWLPQAPDRPVTVQAEVESAMDAVVPGAGLAGAAVHFPENRPVAVRERPVPAQ 72 Query: 73 KACSLHELKSLLRSFHD-CHLCSTSLSTICATQT--EGQDLMIIGYTPSDSDNISG-KPF 128 + ++ + + + A G +++ TP+ + PF Sbjct: 73 APQAPSAPRAEAQPGGGPVGWRVGAAQALYAEGAQAHGARWLVLAETPAAALQAEPFSPF 132 Query: 129 SGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188 G G +LD ML++ + + + + + ++ + P Sbjct: 133 LGDAGKLLDNMLRAARLNQAGVVLLAPLVRLAASGSAAAGLQAALADL-----AAHALPD 187 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW 248 ++L +G + + G+ ++ + T+ T L++ P K W Sbjct: 188 VVLVMGRLAAQAVLQSTEPL-GRLRGQVHSVLGAN----TVVTYDATYLLRNPADKAKAW 242 Query: 249 HALITLKK 256 L + Sbjct: 243 EDLCLAMR 250 >gi|269125294|ref|YP_003298664.1| Uracil-DNA glycosylase superfamily [Thermomonospora curvata DSM 43183] gi|268310252|gb|ACY96626.1| Uracil-DNA glycosylase superfamily [Thermomonospora curvata DSM 43183] Length = 301 Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 35/247 (14%), Positives = 66/247 (26%), Gaps = 48/247 (19%) Query: 36 TYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCST 95 T + R + QQ +A +A +L EL + C Sbjct: 2 TASNAPFVPPGTGWPGDPATPRTPVAGTPQQVRELADQAPTLQELCARQSVCRACPRLVD 61 Query: 96 SL------------------STICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNM 135 + E L+I+G P+ N +G+ F+G ++G+ Sbjct: 62 WREQVALRRRRAFADQQYWGRPVPGWGQERPRLLIVGLAPAAHGGNRTGRIFTGDRSGDW 121 Query: 136 LDKMLQS-------------IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQI 182 L L + PP + E C P + R++ Sbjct: 122 LFASLHRTGLAELPTSVHAGDGQRLPDARMVATVRCAPP-ANKPTPAERTTCLPWLEREV 180 Query: 183 ELISP--KILLFIGNKTKNFF------FNNDAQKTYQNLGKWSNLCT------PHSIIPT 228 L++P ++++ +G + G + + Sbjct: 181 ALVAPWVRVIVALGGYAWQGLWPVLRQVGYRIPRPRPAFGHGVEVELGPPAAAGPEPVTL 240 Query: 229 LATVHPQ 235 L HP Sbjct: 241 LGCYHPS 247 >gi|196229642|ref|ZP_03128506.1| Uracil-DNA glycosylase superfamily [Chthoniobacter flavus Ellin428] gi|196225968|gb|EDY20474.1| Uracil-DNA glycosylase superfamily [Chthoniobacter flavus Ellin428] Length = 206 Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 64/178 (35%), Gaps = 15/178 (8%) Query: 68 DSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127 + L EL + C LC + +MI+G P + + G+P Sbjct: 2 PRPSAAQRRLDEL---VTHLRGCALCPKMHRPAVSGGPVLSKVMIVGQAPGTKEPVLGRP 58 Query: 128 FSGKTGNMLDKMLQSIEIM-----RTQIHISMISPWHP-----PGNRNLSNIEMEICRPI 177 F+ G L + M R I+++ + P G+R E+ C Sbjct: 59 FAWTAGKTLFGWFEKACGMGEVEFRESIYMAAVCRCFPGKNATGGDRVPDAQEIATCSRW 118 Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 + +I+L+ P++L+ IG F +D + +GK S + + HP Sbjct: 119 LEAEIKLLQPELLIPIGKLAIGQFIASDKL--TEIIGKKSRVTYHGHDFDIVPLPHPS 174 >gi|59800499|ref|YP_207211.1| hypothetical protein NGO0030 [Neisseria gonorrhoeae FA 1090] gi|59717394|gb|AAW88799.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090] Length = 245 Score = 83.3 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 86/267 (32%), Gaps = 33/267 (12%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60 M S R L + L + + + + + + Q Sbjct: 1 MLSARYLHLHEALGLGPMWL-------------KQAAAVLPPKNTPATPAQARPQTVRAA 47 Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEG-------QDLMII 113 + Q ++ + ++ L++ + + + L ++ Sbjct: 48 TIRPSQPHNVQTRLETMKALETAAVHTRKPAPETETPPPGLSDGIAPVPAASGITKLAVV 107 Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173 P D + G+ F GK G +LD +L++ + +H + GN S + Sbjct: 108 SLCPPIEDAVYGQLFHGKAGILLDNILKAAGLDAAYVHKTCWVKTAAVGNPMPSEQAVAD 167 Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 I R+++ +LF+G F N + Q + L P H Sbjct: 168 ALGQIARELDGCRAPAVLFLG----QAFVNLERQAMIETL---------CGSRPFFIIDH 214 Query: 234 PQELIQYPLIKKNTWHALITLKKALKN 260 P L++ P +K W L LK+AL+ Sbjct: 215 PARLLRQPELKARNWQVLKQLKRALRQ 241 >gi|218659232|ref|ZP_03515162.1| probable DNA-directed DNA polymerase protein (uracil-DNA glycosylase) [Rhizobium etli IE4771] Length = 142 Score = 82.9 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 31/139 (22%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEP--NNEATYESQRKEKSIDSAIQ------- 51 M S LS ++ + F+AD+GV W+ +E + A +E+ + + SA Q Sbjct: 1 MISANDLSPAELAALLHFHADAGVEWLLEEEAVDRFAEFEAMKAARRPGSAQQDRPAAGE 60 Query: 52 ----------------------PITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHD 89 VQQA +A+ A SL ELK+ + +F+ Sbjct: 61 RPSVGERQTSPRPTAAARPAPASGPQPAIPDGEAVQQARFVAESARSLSELKTAVEAFNG 120 Query: 90 CHLCSTSLSTICATQTEGQ 108 C+L ++ STI A T Sbjct: 121 CNLKHSARSTIFADATPKA 139 >gi|13541658|ref|NP_111346.1| Uracil-DNA glycosylase [Thermoplasma volcanium GSS1] gi|14325058|dbj|BAB59983.1| hypothetical protein [Thermoplasma volcanium GSS1] Length = 227 Score = 82.9 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 67/222 (30%), Gaps = 38/222 (17%) Query: 75 CSLHELKSLLRSFHDCHLCST-----------------SLSTICATQTEGQDLMIIGYTP 117 + E+ S L C T + L+I+G P Sbjct: 6 KDISEMNSDLIGCEKCPRLVTFRKEVAKRDKKFRGQEYWSRPVPGYGDISGRLLIVGLAP 65 Query: 118 SDS-DNISGKPFSGKT-GNMLDKMLQSIEIMRTQI-------------HISMISPWHPPG 162 + + N +G+ F+G + L L I +I+ PP Sbjct: 66 AATGGNRTGRVFTGDKSSDFLVSCLFEAGITNQPTSVSRGDGLVYIDSYITAAVKCVPPD 125 Query: 163 NRNLSNIEMEICRPIIMRQIELIS-PKILLFIGNKTKNFFFNNDAQKTYQNLGK--WSNL 219 N + E++ C P ++ +++ + K++L +G + + G Sbjct: 126 N-KPTMDEIKNCMPYLIFEVKQMKNLKVVLALGKIAFDSVLDVLRSFGTNTKGMKFVHGN 184 Query: 220 CTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + + HP + K ++L + +K L Sbjct: 185 VYDTGTFKLVPSYHPSP--RNVNTGKLKREDFVSLLQKVKAL 224 >gi|288957595|ref|YP_003447936.1| DNA polymerase bacteriophage-type [Azospirillum sp. B510] gi|288909903|dbj|BAI71392.1| DNA polymerase bacteriophage-type [Azospirillum sp. B510] Length = 201 Score = 82.9 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 55/181 (30%), Gaps = 32/181 (17%) Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP--------- 157 G L I+G P + G+PF G++G +LD L ++ I R + ++ + Sbjct: 22 GPRLAIVGEAPGAEEARRGRPFVGRSGKLLDDSLAAVGIERAECLVANVFRHQPPGNKVG 81 Query: 158 -------------------WHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTK 198 W G + + + + P +++ +G Sbjct: 82 HFFSSRARARKEGREIDESWGAFGTSDRLLADFAGEIEHLRATLADYRPSVIVALGRTPT 141 Query: 199 NFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ-YPLIKKNTWHALITLKKA 257 + Q G+ + + T HP L++ + + L Sbjct: 142 WALTGENG--ILQLRGRILPCRLLA-GVEVVPTFHPSYLLRGQLVEQPTFLADLRLAVSR 198 Query: 258 L 258 L Sbjct: 199 L 199 >gi|119509114|ref|ZP_01628265.1| Phage SPO1 DNA polymerase-related protein [Nodularia spumigena CCY9414] gi|119466280|gb|EAW47166.1| Phage SPO1 DNA polymerase-related protein [Nodularia spumigena CCY9414] Length = 92 Score = 82.9 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 10/96 (10%) Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230 M C P ++ QI L+ PKI+L G D + + G+W +A Sbjct: 1 MAACIPYLLEQIRLVDPKIILLTGATAVKGITG-DKRGITKIRGQWLEWE----GRLCMA 55 Query: 231 TVHPQELIQYPLI-----KKNTWHALITLKKALKNL 261 HP L++ P K W + ++ L L Sbjct: 56 IFHPSYLLRNPSKEVGKPKWLMWQDIQAVRTKLDEL 91 >gi|288917968|ref|ZP_06412327.1| Uracil-DNA glycosylase superfamily [Frankia sp. EUN1f] gi|288350623|gb|EFC84841.1| Uracil-DNA glycosylase superfamily [Frankia sp. EUN1f] Length = 281 Score = 82.9 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 30/244 (12%), Positives = 67/244 (27%), Gaps = 40/244 (16%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P++ A + + + + +A A L + + C Sbjct: 7 PDDRAAGTGAGPAAPGTGWPNDPATVDTLVADTAGRVVELAATAADCAGLDARVSVCRAC 66 Query: 91 HLCSTSL------------------STICATQTEGQDLMIIGYTPSDS-DNISGKPFSG- 130 + + L+I+G P+ N +G+ F+G Sbjct: 67 PRLVQWREEVAAVRRAAFADQPYWGRPVPSFGPPDARLLIVGLAPAAHGGNRTGRIFTGD 126 Query: 131 KTGNMLDKMLQSIEIMRTQIHISM-------------ISPWHPPGNRNLSNIEMEICRPI 177 ++G+ L L + R ++ PP + E CRP Sbjct: 127 RSGDWLFAALHRAGLARKPTSVASGDGQEMIDSRVVAAVRCAPP-ANKPTPDERNTCRPW 185 Query: 178 IMRQIELISP--KILLFIGNKTKNFF---FNNDAQKTYQNLGKW-SNLCTPHSIIPTLAT 231 ++R ++L+ P + ++ +G + + + + Sbjct: 186 LVRDLQLLRPTLRSIVVLGGFAWTALWPALRAAGYTLPPRRTPFGHGVTVDLAELRIFGC 245 Query: 232 VHPQ 235 HP Sbjct: 246 YHPS 249 >gi|327311986|ref|YP_004338883.1| uracil-DNA glycosylase superfamily protein [Thermoproteus uzoniensis 768-20] gi|326948465|gb|AEA13571.1| uracil-DNA glycosylase superfamily protein [Thermoproteus uzoniensis 768-20] Length = 214 Score = 82.5 bits (202), Expect = 5e-14, Method: Composition-based stats. Identities = 32/215 (14%), Positives = 66/215 (30%), Gaps = 40/215 (18%) Query: 77 LHELKSLLRSFHDCHL----------------CSTSLSTICATQTEGQDLMIIGYTPSDS 120 + EL L C + + +M++G P+ Sbjct: 1 MEELLRALVQCRRCPRLVAYREGVPPLPKFAGQAYWRRPVPPWGDPKAKIMVVGLAPAAH 60 Query: 121 -DNISGKPFSGKTG-NMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRN 165 N +G+ F+G + L + L ++ + +I+ PPGN Sbjct: 61 GGNRTGRMFTGDSSAQFLFRALHAVGLSNHPYSVSRDDGTEVRCVYITSAVKCAPPGN-R 119 Query: 166 LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI 225 + E+ C P + ++ L+ P+ ++ +G F + + Sbjct: 120 PNAEELANCSPWLKAELSLVRPRAVVALGRVAWVAVFRALGSRPPEF---SHGAFADVGP 176 Query: 226 IPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 + A+ HP + + L L+ LK Sbjct: 177 VRVYASYHPSP--RNTNTGRL---DLEALEAVLKA 206 >gi|194097627|ref|YP_002000663.1| hypothetical protein NGK_0038 [Neisseria gonorrhoeae NCCP11945] gi|239998161|ref|ZP_04718085.1| hypothetical protein Ngon3_01563 [Neisseria gonorrhoeae 35/02] gi|240079924|ref|ZP_04724467.1| hypothetical protein NgonF_01216 [Neisseria gonorrhoeae FA19] gi|240112131|ref|ZP_04726621.1| hypothetical protein NgonM_00857 [Neisseria gonorrhoeae MS11] gi|240114877|ref|ZP_04728939.1| hypothetical protein NgonPID1_01248 [Neisseria gonorrhoeae PID18] gi|240117081|ref|ZP_04731143.1| hypothetical protein NgonPID_01233 [Neisseria gonorrhoeae PID1] gi|240122718|ref|ZP_04735674.1| hypothetical protein NgonP_02013 [Neisseria gonorrhoeae PID332] gi|254492939|ref|ZP_05106110.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|260441308|ref|ZP_05795124.1| hypothetical protein NgonDG_09540 [Neisseria gonorrhoeae DGI2] gi|268594013|ref|ZP_06128180.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268596066|ref|ZP_06130233.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268598191|ref|ZP_06132358.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268600536|ref|ZP_06134703.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|268602769|ref|ZP_06136936.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268681318|ref|ZP_06148180.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|291044663|ref|ZP_06570372.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|293397771|ref|ZP_06641977.1| hypothetical protein NGNG_00761 [Neisseria gonorrhoeae F62] gi|193932917|gb|ACF28741.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945] gi|226511979|gb|EEH61324.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|268547402|gb|EEZ42820.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268549854|gb|EEZ44873.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268582322|gb|EEZ46998.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268584667|gb|EEZ49343.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|268586900|gb|EEZ51576.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268621602|gb|EEZ54002.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|291011557|gb|EFE03553.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|291611717|gb|EFF40786.1| hypothetical protein NGNG_00761 [Neisseria gonorrhoeae F62] gi|317163452|gb|ADV06993.1| hypothetical protein NGTW08_0014 [Neisseria gonorrhoeae TCDC-NG08107] Length = 245 Score = 82.1 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 43/267 (16%), Positives = 85/267 (31%), Gaps = 33/267 (12%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60 M S R L + L + + + + + + Q Sbjct: 1 MLSARYLHLHEALGLGPMWL-------------KQAAAVLPPKNTPATPAQARPQTVRAA 47 Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEG-------QDLMII 113 + Q ++ + ++ L++ + + + L ++ Sbjct: 48 TIRPSQPHNVQARLETMKALETAAVHTRKPAPETETPPPGLSDGIAPVPAASGITKLAVV 107 Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173 P D + G+ F GK G +LD +L++ + +H + GN S + Sbjct: 108 SLCPPIEDAVYGQLFHGKAGILLDNILKAAGLDAAYVHKTCWVKTAAVGNPMPSEQAVAD 167 Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 I +++ +LF+G F N + Q + L P H Sbjct: 168 ALGQIAGELDGCRAPAVLFLG----QAFVNLERQAMIETL---------CGSRPFFIIDH 214 Query: 234 PQELIQYPLIKKNTWHALITLKKALKN 260 P L++ P +K W L LK+AL+ Sbjct: 215 PARLLRQPELKARNWQVLKQLKRALRQ 241 >gi|120405411|ref|YP_955240.1| uracil-DNA glycosylase superfamily protein [Mycobacterium vanbaalenii PYR-1] gi|119958229|gb|ABM15234.1| Uracil-DNA glycosylase superfamily [Mycobacterium vanbaalenii PYR-1] Length = 284 Score = 82.1 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 34/248 (13%), Positives = 69/248 (27%), Gaps = 44/248 (17%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P+ + R + ++A A SL +L + + C Sbjct: 10 PHPRTGDLFTSPVRPGSGWPGDPATRRTAVAATSADVVTMAAAARSLSQLDAEISVCRAC 69 Query: 91 HLCSTSLSTI------------------CATQTEGQDLMIIGYTPSDSD-NISGKPFSG- 130 + + + ++G P+ N +G+ F+G Sbjct: 70 PRLVQWREDVAVEKRRSYADQPYWGRPAPGFGSPRPRIFVVGLAPAAHGANRTGRVFTGD 129 Query: 131 KTGNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177 ++G+ L L + ++ I ++ PPGN + E C P Sbjct: 130 RSGDFLFGSLYRTGLANQQTVTDSADGLVLNDIRVAAAVRCAPPGN-APTPAERSTCAPW 188 Query: 178 IMRQIELI--SPKILLFIGNKTKNFFFNNDA--------QKTYQNLGKWSNLCTPHSIIP 227 + + L ++++ +G G + L TP + Sbjct: 189 LDAEWRLTAGHVRVIVALGGFAWQVALAMIRRAGGAVGAPAPKFGHGVTATLQTPAGDVA 248 Query: 228 TLATVHPQ 235 L HP Sbjct: 249 LLGCYHPS 256 >gi|197118056|ref|YP_002138483.1| uracil-DNA glycosylase [Geobacter bemidjiensis Bem] gi|197087416|gb|ACH38687.1| uracil-DNA glycosylase [Geobacter bemidjiensis Bem] Length = 221 Score = 81.7 bits (200), Expect = 8e-14, Method: Composition-based stats. Identities = 35/252 (13%), Positives = 85/252 (33%), Gaps = 51/252 (20%) Query: 11 QILTIALFYADSGVYWV-FDEPN---NEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQ 66 + +SGV + F EP E Q ++ Q + Sbjct: 13 SLKGYLAELLESGVDELTFGEPVAGEREKRAAVQAPTAPAEAFPQAPAPSAAPEPAAPVR 72 Query: 67 ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126 A++ + A L+ L+ + + G Sbjct: 73 AEASYRPAAPEDSLRV--------------------EGDPRARLLFV---------MHGS 103 Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186 F+G+ G +L+K++ ++ + + Q+ + E R + +I ++ Sbjct: 104 GFAGEAGELLEKIVVAMGLGKEQVGLLSF-------------DSGEASRAAVAGRIAALA 150 Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKN 246 P++++ +G + + G++ +L S I + T HP+ +++ +K++ Sbjct: 151 PEVVVSMGEEAT-ALLLQSEAPLQRLRGRFHDL----SGIALMPTHHPEAMLENQGLKRD 205 Query: 247 TWHALITLKKAL 258 W+ + + L Sbjct: 206 AWNDMQQVMGRL 217 >gi|57167872|ref|ZP_00367012.1| phage SPO1 DNA polymerase-related protein [Campylobacter coli RM2228] gi|305432102|ref|ZP_07401269.1| family 4 uracil-DNA glycosylase [Campylobacter coli JV20] gi|57020994|gb|EAL57658.1| phage SPO1 DNA polymerase-related protein [Campylobacter coli RM2228] gi|304445186|gb|EFM37832.1| family 4 uracil-DNA glycosylase [Campylobacter coli JV20] Length = 202 Score = 81.7 bits (200), Expect = 8e-14, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 68/187 (36%), Gaps = 10/187 (5%) Query: 73 KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 K + +L+ ++ CH + T+ + + LMI+ ++N G + K Sbjct: 25 KIENFKDLRKNIQECTLCHFSKSRCFTLMENEIKNASLMIVDTLAHKNENEKGVLLNSKK 84 Query: 133 GNMLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191 G L L + + + + + S + G + + ++ C P ++EL+ PK++L Sbjct: 85 GERLKFYLKEILGLCEKEFYFSYLFKCFSNGKFDDFS--LQSCLPFFWNELELVQPKMIL 142 Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 +G G+ +A+ + + + P +K L Sbjct: 143 CLGEYPFKSL---GFSDFNALRGEIFAY----KNFFIMASFELEFIEKNPSCEKIFIQDL 195 Query: 252 ITLKKAL 258 +K L Sbjct: 196 KKIKGFL 202 >gi|111225573|ref|YP_716367.1| Uracil-DNA glycosylase [Frankia alni ACN14a] gi|111153105|emb|CAJ64852.1| Uracil-DNA glycosylase [Frankia alni ACN14a] Length = 274 Score = 81.7 bits (200), Expect = 9e-14, Method: Composition-based stats. Identities = 33/242 (13%), Positives = 68/242 (28%), Gaps = 42/242 (17%) Query: 35 ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94 + + + + + Q +A A EL + + C Sbjct: 2 TAGPRRDPARPGAGWPGDLADPTTPVAASCAQVRELAAGAADTGELDARVSVCRACPRLV 61 Query: 95 TSL------------------STICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGN 134 T + + ++I+G P+ N +G+ F+G ++G+ Sbjct: 62 TWREEVAAVRRAAYADQPYWGRPVSSFGPADARILIVGLAPAAHGGNRTGRIFTGDRSGD 121 Query: 135 MLDKMLQS-------------IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ 181 L L I PP + E + CRP ++R Sbjct: 122 WLFASLHRVGLAALATSQAAGDGQSLRATRIVAAVRCAPP-ANKPTTAERDACRPWLVRD 180 Query: 182 IELISP--KILLFIGNKTKNFF------FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 +EL+ P ++++ +G G + P + + + H Sbjct: 181 LELVRPTLRVVVVLGGFAWAALWPALARAGYSVPAPRVRFGHGARAELPGTGVRVVGCYH 240 Query: 234 PQ 235 P Sbjct: 241 PS 242 >gi|158312667|ref|YP_001505175.1| uracil-DNA glycosylase superfamily protein [Frankia sp. EAN1pec] gi|158108072|gb|ABW10269.1| Uracil-DNA glycosylase superfamily [Frankia sp. EAN1pec] Length = 262 Score = 81.7 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 31/230 (13%), Positives = 65/230 (28%), Gaps = 40/230 (17%) Query: 45 SIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL------- 97 + + ++A A EL + + C Sbjct: 4 PGSGWPGDPAVPGTPVARSGPEVATLAGTAPDCDELDARISVCRACPRLVEWREEVAAVR 63 Query: 98 -----------STICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQS-- 142 + + +I+G P+ N +G+ F+G ++G+ L L Sbjct: 64 RAAFADQPYWGRPVPSFGPADARTLIVGLAPAAHGGNRTGRIFTGDRSGDWLFAALHRAG 123 Query: 143 -----------IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189 T + + PP + E + CRP ++R++EL+ P + Sbjct: 124 LAALGTSVSAGDGQRMTGARVVAVVRCAPP-ANKPTPTERDTCRPWLVRELELLRPALRS 182 Query: 190 LLFIGNKTKNFF---FNNDAQKTYQNLGKW-SNLCTPHSIIPTLATVHPQ 235 ++ +G + T + + + L HP Sbjct: 183 IVVLGGFAWSALWPALARAGYPTPARRVPFGHGVTADAGPVRVLGCYHPS 232 >gi|240124908|ref|ZP_04737794.1| hypothetical protein NgonSK_01562 [Neisseria gonorrhoeae SK-92-679] gi|268683489|ref|ZP_06150351.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] gi|268623773|gb|EEZ56173.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] Length = 245 Score = 81.7 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 43/267 (16%), Positives = 85/267 (31%), Gaps = 33/267 (12%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60 M S R L + L + + + + + + Q Sbjct: 1 MLSTRYLHLHEALGLGPMWL-------------KQAAAVLPPKNTPATPAQARPQTVRAA 47 Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEG-------QDLMII 113 + Q ++ + ++ L++ + + + L ++ Sbjct: 48 TIRPSQPHNVQARLETMKALETAAVHTRKPAPETETPPPGLSDGIAPVPAASGITKLAVV 107 Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173 P D + G+ F GK G +LD +L++ + +H + GN S + Sbjct: 108 SLCPPIEDAVYGQLFHGKAGILLDNILKAAGLDAAYVHKTCWVKTAAVGNPMPSEQAVAD 167 Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 I +++ +LF+G F N + Q + L P H Sbjct: 168 ALGQIAGELDGCRAPAVLFLG----QAFVNLERQAMIETL---------CGSRPFFIIDH 214 Query: 234 PQELIQYPLIKKNTWHALITLKKALKN 260 P L++ P +K W L LK+AL+ Sbjct: 215 PARLLRQPELKARNWQVLKQLKRALRQ 241 >gi|227878843|ref|ZP_03996750.1| uracil-DNA glycosylase [Lactobacillus crispatus JV-V01] gi|256849817|ref|ZP_05555248.1| DNA polymerase [Lactobacillus crispatus MV-1A-US] gi|262046938|ref|ZP_06019898.1| DNA polymerase [Lactobacillus crispatus MV-3A-US] gi|227861591|gb|EEJ69203.1| uracil-DNA glycosylase [Lactobacillus crispatus JV-V01] gi|256713306|gb|EEU28296.1| DNA polymerase [Lactobacillus crispatus MV-1A-US] gi|260572920|gb|EEX29480.1| DNA polymerase [Lactobacillus crispatus MV-3A-US] Length = 219 Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 58/182 (31%), Gaps = 31/182 (17%) Query: 104 QTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP--- 160 + LMI+G P ++ ++ PFSG G LDK L+ I + R Q++I+ P Sbjct: 28 GPQHPLLMIVGEAPGRNEIVNNIPFSGDAGKELDKSLKQIGLTRDQVYITSAVRSRPFAI 87 Query: 161 --------------PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206 NR + E+ P + +IE PK+++ +GN Sbjct: 88 KKVFSKRENKEVIKYPNRKPTKKEILAHAPFLDFEIEYAQPKLIVALGNTGLERLLG-SG 146 Query: 207 QKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253 K G+ HP + + + Sbjct: 147 HKISAEHGQVIKNTPILRLNETKDGYIWSKERYTIFPEYHPAAVFYNRKLTDDIIKDWDK 206 Query: 254 LK 255 +K Sbjct: 207 IK 208 >gi|240013343|ref|ZP_04720256.1| hypothetical protein NgonD_01610 [Neisseria gonorrhoeae DGI18] gi|240015788|ref|ZP_04722328.1| hypothetical protein NgonFA_01235 [Neisseria gonorrhoeae FA6140] gi|240120416|ref|ZP_04733378.1| hypothetical protein NgonPI_01295 [Neisseria gonorrhoeae PID24-1] Length = 245 Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 43/267 (16%), Positives = 84/267 (31%), Gaps = 33/267 (12%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60 M S R L + L + + + + + + Q Sbjct: 1 MLSARYLHLHEALGLGPMWL-------------KQAAAVLPPKNTPATPAQARPQTVRAA 47 Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEG-------QDLMII 113 + Q ++ + ++ L++ + + + L ++ Sbjct: 48 TIRPSQPHNVQARLETMKALETAAVHTRKPAPETETPPPGLSDGIAPVPAASGITKLAVV 107 Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173 P D + G+ F GK G +LD +L++ + +H + GN S + Sbjct: 108 SLCPPIEDAVYGQLFHGKAGILLDNILKAAGLDAAYVHKTCWVKTAAVGNPMPSEQAVAD 167 Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 I +++ LF+G F N + Q + L P H Sbjct: 168 ALGQIAGELDGCRAPAALFLG----QAFVNLERQAMIETL---------CGSRPFFIIDH 214 Query: 234 PQELIQYPLIKKNTWHALITLKKALKN 260 P L++ P +K W L LK+AL+ Sbjct: 215 PARLLRQPELKARNWQVLKQLKRALRQ 241 >gi|328465678|gb|EGF36892.1| DNA polymerase [Lactobacillus helveticus MTCC 5463] Length = 185 Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 58/180 (32%), Gaps = 31/180 (17%) Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------- 162 MI+G P ++ ++ PFSG G LDK L+ I + R Q++I+ P Sbjct: 1 MIVGEAPGRNEIVNNIPFSGDAGKELDKSLKQIGLSRDQVYITSAVRSRPFSVKKVFSKR 60 Query: 163 ---------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL 213 NR + E+ P + +I P+I++ +GN K Sbjct: 61 ENKEVIKRPNRKPTKKEVLAHAPFLDYEISYADPQIIVALGNTGLERLLGP-GHKISAEH 119 Query: 214 GKWSN-------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 GK + + HP + + + +K + Sbjct: 120 GKVIDNIPILELNTAKDGYVWSKKKYTVIPEYHPAAVFYNRKLSDDIVKDWEVIKPYIDK 179 >gi|325267816|ref|ZP_08134466.1| hypothetical protein HMPREF9098_2194 [Kingella denitrificans ATCC 33394] gi|324980697|gb|EGC16359.1| hypothetical protein HMPREF9098_2194 [Kingella denitrificans ATCC 33394] Length = 237 Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 85/262 (32%), Gaps = 33/262 (12%) Query: 1 MTSKRILSQEQILTI--ALFYADSGVYWVFDEPNNEA-TYESQRKEKSIDSAIQPITNIR 57 M R + + L + + + V P A T +++ + I Sbjct: 1 MLDTRYVHLHEALGLGALWLHKTAKVLPPVSAPETAAQTAPPPLQKQPVPPVRDNAPPIH 60 Query: 58 HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117 H H Q ++ AQ A E + A ++++ Sbjct: 61 HAHPQPEPQPETAAQPASQPAE----------------RSNISWAEPPRPARVLVLSVCA 104 Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177 S D + K FSG+ G +L KML +I++ +H S N N E++ Sbjct: 105 SLEDRMRQKLFSGEDGALLHKMLAAIQLSPQDVHCSTWLKQSAHFNPNPGEEEVQAAWAD 164 Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237 + ++ + L +G+ + + P T HP L Sbjct: 165 VYQEWQQCGRPPLWLLGDF--------------FEREDVRHCLQQCAPTPYFVTSHPLRL 210 Query: 238 IQYPLIKKNTWHALITLKKALK 259 ++YP +K+ W L LK L Sbjct: 211 LKYPQLKRAAWDTLQQLKAELD 232 >gi|215426571|ref|ZP_03424490.1| hypothetical protein MtubT9_09322 [Mycobacterium tuberculosis T92] gi|215430141|ref|ZP_03428060.1| hypothetical protein MtubE_05558 [Mycobacterium tuberculosis EAS054] gi|219557154|ref|ZP_03536230.1| hypothetical protein MtubT1_07565 [Mycobacterium tuberculosis T17] gi|260200309|ref|ZP_05767800.1| hypothetical protein MtubT4_09303 [Mycobacterium tuberculosis T46] gi|260204512|ref|ZP_05772003.1| hypothetical protein MtubK8_09418 [Mycobacterium tuberculosis K85] gi|297730794|ref|ZP_06959912.1| hypothetical protein MtubKR_06869 [Mycobacterium tuberculosis KZN R506] gi|306781660|ref|ZP_07419997.1| hypothetical protein TMBG_01348 [Mycobacterium tuberculosis SUMu002] gi|306783979|ref|ZP_07422301.1| hypothetical protein TMCG_00889 [Mycobacterium tuberculosis SUMu003] gi|306792669|ref|ZP_07430971.1| hypothetical protein TMEG_01155 [Mycobacterium tuberculosis SUMu005] gi|306797076|ref|ZP_07435378.1| hypothetical protein TMFG_02449 [Mycobacterium tuberculosis SUMu006] gi|306802956|ref|ZP_07439624.1| hypothetical protein TMHG_00443 [Mycobacterium tuberculosis SUMu008] gi|306967345|ref|ZP_07480006.1| hypothetical protein TMIG_02933 [Mycobacterium tuberculosis SUMu009] gi|308231795|ref|ZP_07663937.1| hypothetical protein TMAG_01891 [Mycobacterium tuberculosis SUMu001] gi|308371920|ref|ZP_07667270.1| hypothetical protein TMDG_01137 [Mycobacterium tuberculosis SUMu004] gi|308378886|ref|ZP_07668852.1| hypothetical protein TMJG_03901 [Mycobacterium tuberculosis SUMu010] gi|308380026|ref|ZP_07669104.1| hypothetical protein TMKG_01756 [Mycobacterium tuberculosis SUMu011] gi|308399297|ref|ZP_07669391.1| hypothetical protein TMLG_02594 [Mycobacterium tuberculosis SUMu012] gi|308216047|gb|EFO75446.1| hypothetical protein TMAG_01891 [Mycobacterium tuberculosis SUMu001] gi|308325621|gb|EFP14472.1| hypothetical protein TMBG_01348 [Mycobacterium tuberculosis SUMu002] gi|308331215|gb|EFP20066.1| hypothetical protein TMCG_00889 [Mycobacterium tuberculosis SUMu003] gi|308335031|gb|EFP23882.1| hypothetical protein TMDG_01137 [Mycobacterium tuberculosis SUMu004] gi|308338839|gb|EFP27690.1| hypothetical protein TMEG_01155 [Mycobacterium tuberculosis SUMu005] gi|308342524|gb|EFP31375.1| hypothetical protein TMFG_02449 [Mycobacterium tuberculosis SUMu006] gi|308350330|gb|EFP39181.1| hypothetical protein TMHG_00443 [Mycobacterium tuberculosis SUMu008] gi|308354960|gb|EFP43811.1| hypothetical protein TMIG_02933 [Mycobacterium tuberculosis SUMu009] gi|308358907|gb|EFP47758.1| hypothetical protein TMJG_03901 [Mycobacterium tuberculosis SUMu010] gi|308362870|gb|EFP51721.1| hypothetical protein TMKG_01756 [Mycobacterium tuberculosis SUMu011] gi|308366536|gb|EFP55387.1| hypothetical protein TMLG_02594 [Mycobacterium tuberculosis SUMu012] gi|323720216|gb|EGB29315.1| hypothetical protein TMMG_01954 [Mycobacterium tuberculosis CDC1551A] Length = 275 Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 32/230 (13%), Positives = 68/230 (29%), Gaps = 37/230 (16%) Query: 42 KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL---- 97 + + + Q ++A A S+ EL +L+ C + Sbjct: 19 PVEPGSGWPGDPATPQTPVAADAAQVSALAGGAGSICELNALISVCRACPRLVSWREEVA 78 Query: 98 --------------STICATQTEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKMLQ 141 + ++ L+I+G P+ N +G+ F+G ++G+ L L Sbjct: 79 VVKRRAFADQPYWGRPVPGWGSKRPRLLILGLAPAAHGANRTGRMFTGDRSGDQLYAALH 138 Query: 142 -------------SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE--LIS 186 + + +I I+ PPGN + E C P + + Sbjct: 139 RAGLVNSPVSVDAADGLRANRIRITAPVRCAPPGNS-PTPAERLTCSPWLNAEWRLVSDH 197 Query: 187 PKILLFIGNKTKNFFFNNDAQKTY-QNLGKWSNLCTPHSIIPTLATVHPQ 235 + ++ +G + + + + L HP Sbjct: 198 IRAIVALGGFAWQVALRLAGASGTPKPRFGHGVVTELGAGVRLLGCYHPS 247 >gi|15840705|ref|NP_335742.1| hypothetical protein MT1297.1 [Mycobacterium tuberculosis CDC1551] gi|308375416|ref|ZP_07668016.1| hypothetical protein TMGG_01821 [Mycobacterium tuberculosis SUMu007] gi|54040069|sp|P64786|Y1289_MYCBO RecName: Full=Uncharacterized protein Mb1289 gi|54042500|sp|P64785|Y1259_MYCTU RecName: Full=Uncharacterized protein Rv1259/MT1297.1 gi|13880894|gb|AAK45556.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|308346389|gb|EFP35240.1| hypothetical protein TMGG_01821 [Mycobacterium tuberculosis SUMu007] Length = 268 Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 32/230 (13%), Positives = 68/230 (29%), Gaps = 37/230 (16%) Query: 42 KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL---- 97 + + + Q ++A A S+ EL +L+ C + Sbjct: 12 PVEPGSGWPGDPATPQTPVAADAAQVSALAGGAGSICELNALISVCRACPRLVSWREEVA 71 Query: 98 --------------STICATQTEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKMLQ 141 + ++ L+I+G P+ N +G+ F+G ++G+ L L Sbjct: 72 VVKRRAFADQPYWGRPVPGWGSKRPRLLILGLAPAAHGANRTGRMFTGDRSGDQLYAALH 131 Query: 142 -------------SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE--LIS 186 + + +I I+ PPGN + E C P + + Sbjct: 132 RAGLVNSPVSVDAADGLRANRIRITAPVRCAPPGNS-PTPAERLTCSPWLNAEWRLVSDH 190 Query: 187 PKILLFIGNKTKNFFFNNDAQKTY-QNLGKWSNLCTPHSIIPTLATVHPQ 235 + ++ +G + + + + L HP Sbjct: 191 IRAIVALGGFAWQVALRLAGASGTPKPRFGHGVVTELGAGVRLLGCYHPS 240 >gi|108805734|ref|YP_645671.1| uracil-DNA glycosylase superfamily protein [Rubrobacter xylanophilus DSM 9941] gi|108766977|gb|ABG05859.1| Uracil-DNA glycosylase superfamily [Rubrobacter xylanophilus DSM 9941] Length = 228 Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 32/202 (15%), Positives = 59/202 (29%), Gaps = 36/202 (17%) Query: 67 ADSIAQKACSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQ 108 S SL L+ + S C + Sbjct: 2 PSSSTATGRSLAALEREVVSCRRCPRLVAWREEVARTKRAAYASETYWGRPVPGFGDPAA 61 Query: 109 DLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKMLQSIEIMRTQI-------------HIS 153 ++I+G P+ N +G+ F+G ++G+ L L I+ Sbjct: 62 RVVILGLAPAAHGANRTGRFFTGDRSGDFLFAALHRAGFASMPTSRSTDDGLRLEGAWIT 121 Query: 154 MISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL 213 PP N + E + C P R++EL++P+ ++ +G + + Sbjct: 122 AAVRCAPPQN-RPTPQERDACLPYAARELELLAPRAVVCLGAFAWDAALRILGVRPKPRF 180 Query: 214 GKWSNLCTPHSIIPTLATVHPQ 235 G + L HP Sbjct: 181 G--HGAEHRAGNLTLLGCYHPS 200 >gi|319638976|ref|ZP_07993734.1| uracil-DNA glycosylase, family 4 [Neisseria mucosa C102] gi|317399880|gb|EFV80543.1| uracil-DNA glycosylase, family 4 [Neisseria mucosa C102] Length = 253 Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 45/268 (16%), Positives = 88/268 (32%), Gaps = 25/268 (9%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDS-AIQPITNIRHI 59 M S R L + L + + + + P + + + A++ ++ H Sbjct: 1 MLSSRYLHLHEALGLGPMWLNRNAKIIHVAPQAATAPVRPKTIATDTAQAVRTLSAGAHQ 60 Query: 60 HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD-------LMI 112 A+ A + E + ++ + + + D +M+ Sbjct: 61 ARTAAIATAQTAKPAVRVPE--AAPKAIAKTP--AKTEKAAHSDNLPRLDVTIRPSEIMV 116 Query: 113 IGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEME 172 + PS D++ G FSG G +LD +L +I + Q H + P + Sbjct: 117 VSICPSTEDSLHGTLFSGNVGTLLDNILAAIGLKPEQAHKTAWVKTAPVFTALPDAEHVR 176 Query: 173 ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATV 232 + ++ + +LF+G + +G + LC P Sbjct: 177 AELAEMQNELTASQARAVLFLGKI----------FDSPDMIGLMNELC---GKRPHFVIP 223 Query: 233 HPQELIQYPLIKKNTWHALITLKKALKN 260 HP L+ P +K W L LK+ L Sbjct: 224 HPARLLMQPQLKAQAWQILKPLKQLLAK 251 >gi|328957376|ref|YP_004374762.1| uracil-DNA glycosylase superfamily [Carnobacterium sp. 17-4] gi|328673700|gb|AEB29746.1| uracil-DNA glycosylase superfamily [Carnobacterium sp. 17-4] Length = 213 Score = 80.2 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 64/206 (31%), Gaps = 37/206 (17%) Query: 91 HLCSTSLS------TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIE 144 L + +++G P +++ ++G PFSG+ G L + + +E Sbjct: 8 ELAKKRSQEFSVEGFVYGQGPINPKFLLVGEAPGETEAVNGIPFSGRAGKELMRFFELLE 67 Query: 145 IMRTQIHISMISPWHPP-----------------GNRNLSNIEMEICRPIIMRQIELISP 187 + RT+++I+ P NR + E+ P++ ++E I Sbjct: 68 VDRTEVYITSAFRSRPYRYKEKMDRKTKQLVYRKYNRPPTKQELIAHAPLLDYEVETIQT 127 Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWS-------------NLCTPHSIIPTLATVHP 234 +L +GN K + GK T HP Sbjct: 128 PYILTMGNIGLQRLLGPK-MKVSEQHGKLYHGPVMCLASSEDDTYTWTEKHYAVFPTFHP 186 Query: 235 QELIQYPLIKKNTWHALITLKKALKN 260 + + + L KK + Sbjct: 187 ASIFYNRGLVETIHEDLAQFKKLINK 212 >gi|322419021|ref|YP_004198244.1| uracil-DNA glycosylase superfamily protein [Geobacter sp. M18] gi|320125408|gb|ADW12968.1| Uracil-DNA glycosylase superfamily [Geobacter sp. M18] Length = 198 Score = 80.2 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 34/257 (13%), Positives = 78/257 (30%), Gaps = 63/257 (24%) Query: 2 TSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHS 61 +R L + ADSGV + + Sbjct: 1 MEERELLLRSLRGYLTDLADSGVDDL--------------------AFGAETPVAAAEPP 40 Query: 62 PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121 V ++A +A L LC L+ + Sbjct: 41 ARVAPGAALAPEASDLE------------PLCRQ-------EGNPRARLLFL-------- 73 Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ 181 ++G F G +L +++ +++ Q+ + S + R I R+ Sbjct: 74 -MTGSGFQSAGGELLARIIAAMKFQPDQVCLLSF----------DSGEDAAALRFAIGRR 122 Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241 I ++P++++ +G + + + G++ + + T+HP+ L+ Sbjct: 123 IGALAPEVVVTLGEEAT-SLLLDGQTSLDRVRGRFQEVQGRG----VMPTLHPELLLADE 177 Query: 242 LIKKNTWHALITLKKAL 258 +K++ W + + L Sbjct: 178 TLKRHVWEDMKKVMHRL 194 >gi|15608399|ref|NP_215775.1| hypothetical protein Rv1259 [Mycobacterium tuberculosis H37Rv] gi|31792450|ref|NP_854943.1| hypothetical protein Mb1289 [Mycobacterium bovis AF2122/97] gi|121637186|ref|YP_977409.1| hypothetical protein BCG_1317 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148661046|ref|YP_001282569.1| hypothetical protein MRA_1267 [Mycobacterium tuberculosis H37Ra] gi|148822475|ref|YP_001287230.1| hypothetical protein TBFG_11285 [Mycobacterium tuberculosis F11] gi|167969582|ref|ZP_02551859.1| hypothetical protein MtubH3_16791 [Mycobacterium tuberculosis H37Ra] gi|215403098|ref|ZP_03415279.1| hypothetical protein Mtub0_05261 [Mycobacterium tuberculosis 02_1987] gi|215410894|ref|ZP_03419702.1| hypothetical protein Mtub9_06085 [Mycobacterium tuberculosis 94_M4241A] gi|215445437|ref|ZP_03432189.1| hypothetical protein MtubT_05663 [Mycobacterium tuberculosis T85] gi|224989661|ref|YP_002644348.1| hypothetical protein JTY_1292 [Mycobacterium bovis BCG str. Tokyo 172] gi|253799696|ref|YP_003032697.1| hypothetical protein TBMG_02722 [Mycobacterium tuberculosis KZN 1435] gi|254231515|ref|ZP_04924842.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|254364156|ref|ZP_04980202.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] gi|254550266|ref|ZP_05140713.1| hypothetical protein Mtube_07369 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260186192|ref|ZP_05763666.1| hypothetical protein MtubCP_09208 [Mycobacterium tuberculosis CPHL_A] gi|289442694|ref|ZP_06432438.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289446849|ref|ZP_06436593.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289554953|ref|ZP_06444163.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289569265|ref|ZP_06449492.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289573918|ref|ZP_06454145.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289745003|ref|ZP_06504381.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289749801|ref|ZP_06509179.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289753330|ref|ZP_06512708.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289757356|ref|ZP_06516734.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|294994815|ref|ZP_06800506.1| hypothetical protein Mtub2_09972 [Mycobacterium tuberculosis 210] gi|297633808|ref|ZP_06951588.1| hypothetical protein MtubK4_06784 [Mycobacterium tuberculosis KZN 4207] gi|298524761|ref|ZP_07012170.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|313658126|ref|ZP_07815006.1| hypothetical protein MtubKV_06884 [Mycobacterium tuberculosis KZN V2475] gi|3261594|emb|CAB00912.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv] gi|31618039|emb|CAD94150.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97] gi|121492833|emb|CAL71304.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124600574|gb|EAY59584.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|134149670|gb|EBA41715.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] gi|148505198|gb|ABQ73007.1| hypothetical protein MRA_1267 [Mycobacterium tuberculosis H37Ra] gi|148721002|gb|ABR05627.1| conserved hypothetical protein [Mycobacterium tuberculosis F11] gi|224772774|dbj|BAH25580.1| hypothetical protein JTY_1292 [Mycobacterium bovis BCG str. Tokyo 172] gi|253321200|gb|ACT25803.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 1435] gi|289415613|gb|EFD12853.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289419807|gb|EFD17008.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289439585|gb|EFD22078.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289538349|gb|EFD42927.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289543019|gb|EFD46667.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289685531|gb|EFD53019.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289690388|gb|EFD57817.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289693917|gb|EFD61346.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289712920|gb|EFD76932.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|298494555|gb|EFI29849.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|326902881|gb|EGE49814.1| hypothetical protein TBPG_00735 [Mycobacterium tuberculosis W-148] gi|328459443|gb|AEB04866.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 4207] Length = 299 Score = 79.8 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 32/230 (13%), Positives = 68/230 (29%), Gaps = 37/230 (16%) Query: 42 KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL---- 97 + + + Q ++A A S+ EL +L+ C + Sbjct: 43 PVEPGSGWPGDPATPQTPVAADAAQVSALAGGAGSICELNALISVCRACPRLVSWREEVA 102 Query: 98 --------------STICATQTEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKMLQ 141 + ++ L+I+G P+ N +G+ F+G ++G+ L L Sbjct: 103 VVKRRAFADQPYWGRPVPGWGSKRPRLLILGLAPAAHGANRTGRMFTGDRSGDQLYAALH 162 Query: 142 -------------SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE--LIS 186 + + +I I+ PPGN + E C P + + Sbjct: 163 RAGLVNSPVSVDAADGLRANRIRITAPVRCAPPGNS-PTPAERLTCSPWLNAEWRLVSDH 221 Query: 187 PKILLFIGNKTKNFFFNNDAQKTY-QNLGKWSNLCTPHSIIPTLATVHPQ 235 + ++ +G + + + + L HP Sbjct: 222 IRAIVALGGFAWQVALRLAGASGTPKPRFGHGVVTELGAGVRLLGCYHPS 271 >gi|326387655|ref|ZP_08209261.1| hypothetical protein Y88_0568 [Novosphingobium nitrogenifigens DSM 19370] gi|326207701|gb|EGD58512.1| hypothetical protein Y88_0568 [Novosphingobium nitrogenifigens DSM 19370] Length = 258 Score = 79.8 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 79/242 (32%), Gaps = 18/242 (7%) Query: 10 EQILTIALFYADSGVYW-VFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQA- 67 I ++ D+GV DEP + + + K + + + A Sbjct: 20 AAINAALQWWHDAGVDCDFADEPQDWLAASNPKPVKPLTKSAAKAPEAVTKTIGGGRSAW 79 Query: 68 -DSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126 ++A+ L L + E LM+I P ++ Sbjct: 80 PATLAEFVPWW--LSEA-------SLAPAGAVRMAPVGPETPPLMVIVPMP--EESDRET 128 Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186 +G GN+LD L + + R +I+++ P + + I + LI Sbjct: 129 LLAGPIGNLLDGFLAAAGLSRAEIYLASALPARVAAPDWADLAKQGLGDL-IAHHVGLIR 187 Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKN 246 P+ L+ G + ND+ T + + IP L+ + ++ P +K Sbjct: 188 PERLILFGQSGISTLLGNDSPNTCW---HLRPIYQGDAGIPVLSAYDLETMVARPALKAK 244 Query: 247 TW 248 W Sbjct: 245 LW 246 >gi|86742598|ref|YP_482998.1| uracil-DNA glycosylase superfamily protein [Frankia sp. CcI3] gi|86569460|gb|ABD13269.1| Uracil-DNA glycosylase superfamily [Frankia sp. CcI3] Length = 271 Score = 79.8 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 31/235 (13%), Positives = 69/235 (29%), Gaps = 42/235 (17%) Query: 42 KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL---- 97 + + + + ++A A EL + + C T Sbjct: 6 PVRPGSGWPGDLAAADTPVAATPGEVRALAADATGTRELDARMSVCRACPRLVTWREEVA 65 Query: 98 --------------STICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQ 141 + + +++IG P+ N +G+ F+G ++G+ L L Sbjct: 66 AVRRAAFAEQAYWGRPVPSFGPGDARILVIGLAPAAHGGNRTGRIFTGDRSGDWLFASLH 125 Query: 142 S-------------IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR--QIELIS 186 T I + PP + E + CRP ++R ++ + Sbjct: 126 RVGLAALPTSVSAGDGQRLTATRIVAVVRCAPP-ANKPTTTERDTCRPWLVRDLELVRST 184 Query: 187 PKILLFIGNKTKNFF------FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 ++++ +G + + G + P S + + HP Sbjct: 185 LRVIVVLGGFAWSALWPALVQAGFPVPPRRVSFGHGVRVELPVSGVSVVGCYHPS 239 >gi|320161391|ref|YP_004174615.1| uracil-DNA glycosylase [Anaerolinea thermophila UNI-1] gi|319995244|dbj|BAJ64015.1| uracil-DNA glycosylase [Anaerolinea thermophila UNI-1] Length = 230 Score = 79.4 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 37/202 (18%), Positives = 62/202 (30%), Gaps = 40/202 (19%) Query: 73 KACSLHELKSLLRSFHDCHL--------CSTSLS----------TICATQTEGQDLMIIG 114 +L EL L C T + ++MIIG Sbjct: 3 PENALQELNHALVQCKRCERLTHWREHIAQTRKKAHRDEVYWGKPVPGFGDPHAEVMIIG 62 Query: 115 YTPSDSD-NISGKPFSGK-TGNMLDKMLQSIEIMRTQI-------------HISMISPWH 159 P N +G+ F+G +G+ L L +I+ I Sbjct: 63 LAPGAHGSNRTGRMFTGDSSGHFLYAALYRAGFANQPHSHALYDGLTLRRVYITAICRCV 122 Query: 160 PPGNRNLSNIEMEICRPIIMRQIE-LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS- 217 PP N + E++ CRP + ++I K + +GN + Q + +W Sbjct: 123 PPDN-KPTPQEIQNCRPYLEQEIALFPQLKGFVALGNYAFQWLVQWYRQHGENDTREWQF 181 Query: 218 ----NLCTPHSIIPTLATVHPQ 235 + + LA+ HP Sbjct: 182 AHNAFYAPRNGLPWLLASYHPS 203 >gi|118619593|ref|YP_907925.1| hypothetical protein MUL_4483 [Mycobacterium ulcerans Agy99] gi|118571703|gb|ABL06454.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length = 275 Score = 79.0 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 32/247 (12%), Positives = 67/247 (27%), Gaps = 39/247 (15%) Query: 25 YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLL 84 V P + + + + + +A +A S+ EL + + Sbjct: 4 DRVLTHP--RTGQPFGSPVRPGTGWPGDPASSQTPVAAEAARVAELAGRAGSIAELDAAI 61 Query: 85 RSFHDCHLCSTSL------------------STICATQTEGQDLMIIGYTPSDSD-NISG 125 C T + +E L+I+G P+ N +G Sbjct: 62 SVCRACPRLVTWREEVAVAKRRAFADQPYWGRPVPGWGSERPWLLIVGLAPAAHGANRTG 121 Query: 126 KPFSG-KTGNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGNRNLSNIEM 171 + F+G ++G+ L L + + I I P + E Sbjct: 122 RMFTGDRSGDQLYAALHRAGLVSQPTSVDAADGLRAEPIRIVAPVRC-APPANAPTPAER 180 Query: 172 EICRPIIMRQIE--LISPKILLFIGNKTKNFFFNNDAQ-KTYQNLGKWSNLCTPHSIIPT 228 + C P + + ++++ +G + + S + Sbjct: 181 KTCAPWLDAEWRLVSHDVRVIVALGGFAWKIALGLPGSLGAPRPRFGHGVVAELGSGVQL 240 Query: 229 LATVHPQ 235 L HP Sbjct: 241 LGCYHPS 247 >gi|296170162|ref|ZP_06851759.1| uracil-DNA glycosylase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895188|gb|EFG74903.1| uracil-DNA glycosylase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 270 Score = 79.0 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 31/238 (13%), Positives = 66/238 (27%), Gaps = 37/238 (15%) Query: 34 EATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLC 93 + + Q ++A+ A S+ EL +L+ C Sbjct: 6 RTGQPFDSPVVPGTGWPGDPATPQTPVAADAAQVAALARTATSIPELDALVSVCRACPRL 65 Query: 94 STSL------------------STICATQTEGQDLMIIGYTPSDSD-NISGKPFSG-KTG 133 + +E L+I+G P+ N +G+ F+G ++G Sbjct: 66 VDWREDVAVLKRRAFADQPYWGRPVPGWGSERPRLLIVGLAPAAHGANRTGRMFTGDRSG 125 Query: 134 NMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180 + L L + + Q+ I PP + +E + C P + Sbjct: 126 DQLYAALHRAGLVNQPTSVDAADGLRARQVRIVAPVRCAPP-ANAPTPLERDTCWPWLEA 184 Query: 181 QIE--LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS-IIPTLATVHPQ 235 + + ++ +G + + + + L HP Sbjct: 185 EWRLVSEHVRTIVALGGFAWQIALRLPGASVMRKPRFGHGVVAQFAPGVRLLGCYHPS 242 >gi|299140387|ref|ZP_07033547.1| Uracil-DNA glycosylase superfamily [Acidobacterium sp. MP5ACTX8] gi|298597637|gb|EFI53815.1| Uracil-DNA glycosylase superfamily [Acidobacterium sp. MP5ACTX8] Length = 279 Score = 78.6 bits (192), Expect = 7e-13, Method: Composition-based stats. Identities = 30/210 (14%), Positives = 66/210 (31%), Gaps = 44/210 (20%) Query: 77 LHELKSLLRSFHDC-HLCSTSL-----------------STICATQTEGQDLMIIGYTPS 118 L EL + + C L + + ++G P Sbjct: 55 LQELHEAITTCERCTRLREYCRGIGETRRKAYRDEVYWARPVPGFGDPKARIHVMGLAPG 114 Query: 119 DSD-NISGKPFSGK-TGNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGN 163 N +G+PF+G +G+ + +L + + IS + PPG+ Sbjct: 115 AHGANRTGRPFTGDGSGDFMYPVLHELGLATKPKAVAREDGLKLRNLWISSVVRCAPPGD 174 Query: 164 RNLSNIEMEICRPIIMRQIEL-ISPKILLFIGNKTKNFFF------NNDAQKTYQNLGKW 216 E+ C + +IE ++++ +G + + +++ G Sbjct: 175 -KPKPEEIRNCSGHLTAEIEALPGVRVVVCLGKIAWDGYLAHLVASGVIERRSAYVFGHG 233 Query: 217 SNLCTPHSIIPTLATVHPQELIQYPLIKKN 246 + PH + L + HP ++ + Sbjct: 234 AEYLLPH-GVTLLGSYHPS--LRNTNTGRL 260 >gi|161527874|ref|YP_001581700.1| uracil-DNA glycosylase superfamily protein [Nitrosopumilus maritimus SCM1] gi|160339175|gb|ABX12262.1| Uracil-DNA glycosylase superfamily [Nitrosopumilus maritimus SCM1] Length = 217 Score = 78.6 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 71/222 (31%), Gaps = 46/222 (20%) Query: 77 LHELKSLLRSFHDCHLCST-----SLSTI--C-----------ATQTEGQDLMIIGYTPS 118 + L ++S C S + + + L+I+G P+ Sbjct: 3 IETLNKKIKSCQRCTRLSAYIRDVAKNKVRRFKDETYYGRPLSGFGDINAKLLIVGLAPA 62 Query: 119 DS-DNISGKPFSGK-TGNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGN 163 N +G+ F+G +G+ L K++ +I+ PP N Sbjct: 63 AHGGNRTGRMFTGDSSGDWLAKVMHKTGFANIPTSQTSDDGLTLNNAYITAAVRCAPPQN 122 Query: 164 RNLSNIEMEICRPIIMRQIEL-ISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSNL 219 + EM+ C + +++++ + +L +G + + K N Sbjct: 123 -KPTKEEMQNCFSFLEQELQILNNVTTILCLGKIAYDATCKLLDVKPGKFG------HNQ 175 Query: 220 CTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 ++ + + + HP Q + W + K K L Sbjct: 176 VFKYNEMQVITSYHPS--KQNTQTGRLLWKDWHAVFKRAKKL 215 >gi|111219605|ref|YP_710399.1| putative DNA polymerase-like protein [Frankia alni ACN14a] gi|111147137|emb|CAJ58784.1| Putative DNA polymerase related protein (partial) [Frankia alni ACN14a] Length = 171 Score = 78.2 bits (191), Expect = 9e-13, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 56/136 (41%), Gaps = 10/136 (7%) Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG--------N 163 ++G P D ++ G+PF G G +LD+ L + R +++ + + Sbjct: 1 MVGEQPGDVEDRRGQPFVGPAGKLLDRALGEAGLDRAEVYATNAVKHFGYRTGNGPRRIH 60 Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH 223 + + CRP + ++ +I P +++ +G + + G+ P Sbjct: 61 QTPQARHVTACRPWLAAELNVIRPSLVVVLGATAGASLLGPSFRV-TRMRGRLLPGP-PG 118 Query: 224 SIIPTLATVHPQELIQ 239 S LAT+HP +++ Sbjct: 119 SNAQLLATLHPSAVLR 134 >gi|320106222|ref|YP_004181812.1| Uracil-DNA glycosylase superfamily [Terriglobus saanensis SP1PR4] gi|319924743|gb|ADV81818.1| Uracil-DNA glycosylase superfamily [Terriglobus saanensis SP1PR4] Length = 237 Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 22/218 (10%), Positives = 55/218 (25%), Gaps = 40/218 (18%) Query: 67 ADSIAQKACSLHELKSLLRSFHDCHL------------------CSTSLSTICATQTEGQ 108 +AQ L + + S C + Sbjct: 3 PAPLAQAKSQLETARQNIVSCELCPRLRSYCIGIGETKRRAYLDWDYWARPVPGFGDPTA 62 Query: 109 DLMIIGYTPSDSD-NISGKPFSGK-TGNMLDKML-------------QSIEIMRTQIHIS 153 ++I+G P N +G+PF+G G + +L + + I+ Sbjct: 63 RVLIVGLAPGAHGANRTGRPFTGDGAGYFMYPVLYNLGFATKPLATSRDDGLKLRGAWIA 122 Query: 154 MISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL 213 + PP ++ + L ++++ +G + + + Sbjct: 123 SVVRCAPPADKPMPQEVRNCAVHFRAELAALRRLRVVVCLGKIAWDGYLAYLLGEGVIKR 182 Query: 214 GKWSNLCTPHS-----IIPTLATVHPQELIQYPLIKKN 246 + + + HP ++ + Sbjct: 183 RSAYTFTHGADYLMPNGLRLIGSYHPS--LRNTNTGRL 218 >gi|262195758|ref|YP_003266967.1| uracil-DNA glycosylase superfamily [Haliangium ochraceum DSM 14365] gi|262079105|gb|ACY15074.1| Uracil-DNA glycosylase superfamily [Haliangium ochraceum DSM 14365] Length = 213 Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 69/182 (37%), Gaps = 13/182 (7%) Query: 64 VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123 A+ AQ+A + L++ + + C LC + LM++G P + Sbjct: 2 TPTANPPAQRA-TQRALRTHIDALRLCRLCPDMHAPPIPGPPVVSPLMLLGQAPGRHEGR 60 Query: 124 SGKPFSGKTGNMLDKMLQSIEIM----RTQIHISMISPWHP------PGNRNLSNIEMEI 173 G+PF K G L I + R +++I+ + P G+R E+E Sbjct: 61 VGRPFGWKAGKTLFTWFAGIGLPEEALRQRVYIAAVCRCFPGPHPSGGGDRVPKRAEIER 120 Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 C + R+IEL+ P++++ IG + +G + + + H Sbjct: 121 CHGWLAREIELLRPRLIIPIGKLAIAQLMPVRKL--SEVVGGCHRIAFAGHTLDAIPLPH 178 Query: 234 PQ 235 P Sbjct: 179 PS 180 >gi|149194193|ref|ZP_01871291.1| Uracil-DNA glycosylase superfamily protein [Caminibacter mediatlanticus TB-2] gi|149136146|gb|EDM24624.1| Uracil-DNA glycosylase superfamily protein [Caminibacter mediatlanticus TB-2] Length = 208 Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 61/166 (36%), Gaps = 8/166 (4%) Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH-ISMISPWH 159 +MIIG P +++ PF GK G L+ ++ + R + I+ P+ Sbjct: 35 FLDNKTDNPIMIIGEAPGENEVKQKSPFVGKAGENLNYLISLSGLNRKKHFLITNAFPFR 94 Query: 160 PPGNRNLSN---IEMEICRPIIMRQIELISPKILLFIGNKTKNFF-FNNDAQKTYQNLGK 215 E++I ++ +I ++ P ++L +GN + F + K + G Sbjct: 95 TINENKNRTPKISELKIASKLLEEEINIVKPSLILLLGNSSIKAFSYLVPEVKNLKKCGF 154 Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + I HP L +K +L K+L L Sbjct: 155 YDVDTEKFGKIKIGICYHPSPLAFN---RKEIRESLEKFFKSLYQL 197 >gi|240172643|ref|ZP_04751302.1| hypothetical protein MkanA1_25235 [Mycobacterium kansasii ATCC 12478] Length = 268 Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 32/230 (13%), Positives = 62/230 (26%), Gaps = 37/230 (16%) Query: 42 KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL---- 97 + + Q +A A S+ EL +L+ C Sbjct: 12 PVDPGTGWPGDPATPQTPVAADAAQVVQLAGAARSIRELDALVSVCRACPRLVGWREHVA 71 Query: 98 --------------STICATQTEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKMLQ 141 + +E L+I+G P+ N +G+ F+G ++G+ L L Sbjct: 72 AGKRRAFADQPYWGRPVPGWGSERPRLLIVGLAPAAHGANRTGRMFTGDRSGDQLYAALY 131 Query: 142 -------------SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE--LIS 186 + + QI I P + E C P + + Sbjct: 132 RAGLVNQPTSVDSADGLRANQIRIVAPVRC-APPANAPTPAERLACSPWLDTEWRLVADD 190 Query: 187 PKILLFIGNKTKNFFFNNDAQ-KTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 ++++ +G + + S + L HP Sbjct: 191 VRVIVALGGFAWQVALRMSGALAKPKPRFGHGVVAEVGSRLRLLGCYHPS 240 >gi|307595747|ref|YP_003902064.1| Uracil-DNA glycosylase superfamily [Vulcanisaeta distributa DSM 14429] gi|307550948|gb|ADN51013.1| Uracil-DNA glycosylase superfamily [Vulcanisaeta distributa DSM 14429] Length = 222 Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 25/202 (12%), Positives = 57/202 (28%), Gaps = 38/202 (18%) Query: 87 FHDCHLCST----------------SLSTICATQTEGQ-DLMIIGYTPSDSD-NISGKPF 128 C + + G +MI+G P+ N +G+ F Sbjct: 19 CRACPRLVSYRESVKPLPRFMNDDYWRRPVPPWGDLGNARIMIVGLAPAAHGGNRTGRMF 78 Query: 129 SGKTG-NMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSNIEMEIC 174 +G + L + L + +I+ + PP NR + Sbjct: 79 TGDSSAQFLFRALYEAGLSSKPYSISRNDGVTIKCVYITSVVKCAPPNNRPNNEEIHTCV 138 Query: 175 RPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHP 234 ++E + P+ ++ +G+ F + K + + + HP Sbjct: 139 SNWFRYELEHVRPRAIVALGHIA---FLGIKLALGIKAEFK-HGGYIDFNGVRIFMSYHP 194 Query: 235 QELIQYPLIKKNTWHALITLKK 256 + + L+ + + Sbjct: 195 SP--RNTNTGRLRIEDLVMILR 214 >gi|225872452|ref|YP_002753907.1| putative uracil-DNA glycosylase, family 4 [Acidobacterium capsulatum ATCC 51196] gi|225791513|gb|ACO31603.1| putative uracil-DNA glycosylase, family 4 [Acidobacterium capsulatum ATCC 51196] Length = 231 Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 34/220 (15%), Positives = 65/220 (29%), Gaps = 42/220 (19%) Query: 74 ACSLHELKSLLRSFHDCHL------------------CSTSLSTICATQTEGQDLMIIGY 115 +L L+ + S C + + G L+++G Sbjct: 2 PLALAALEQRVVSCERCPRLREYCEEVARKRRRMWSEWDYWGKPVPSFGDPGARLLLVGL 61 Query: 116 TPSDSD-NISGKPFSGK-TGNMLDKMLQSIEI-------------MRTQIHISMISPWHP 160 P N +G+PF+G +G+ L L I+ + P Sbjct: 62 APGAHGSNRTGRPFTGDGSGDFLYPALYEAGFASQPKATHRGDGLRLLDAWITAVGRCAP 121 Query: 161 PGNRNLSNIEMEICRPIIMRQIEL-ISPKILLFIGNKTKNFFFNN-DAQKTYQNLGKWSN 218 PGN E+ C P + ++ +++ +G + + G Sbjct: 122 PGN-KPLPAELANCAPYLDEEVAALPRVRVIFALGKIAFDGIVGHLIRTGQIARRGPLQF 180 Query: 219 LCTPHSIIP----TLATVHPQELIQYPLIKKNTWHALITL 254 IP +A+ HP +Q K T ++ + Sbjct: 181 GHGVCYAIPGGRFLMASYHPS--LQNTNTGKLTREMMLDV 218 >gi|299821653|ref|ZP_07053541.1| uracil-DNA glycosylase [Listeria grayi DSM 20601] gi|299817318|gb|EFI84554.1| uracil-DNA glycosylase [Listeria grayi DSM 20601] Length = 235 Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 30/178 (16%) Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG---- 162 LM++G P +++ +G PF+G+ G L+KM+ + R +++I+ P Sbjct: 50 HPTLMLVGEAPGETEIHTGVPFTGRAGKELEKMMTRANVQRDEVYITSAVRSRPYKERQK 109 Query: 163 -------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209 NR + E+ P++ +IE SP++++ +GN +D Sbjct: 110 WDRKTERNEWKRYNRTPNKGEIIAHAPVLDYEIETSSPEVIVTLGNIGLKRLLGSDWSV- 168 Query: 210 YQNLGKWS------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 G + T HP + + + Sbjct: 169 SAAHGTVYQGPIQFWNQTKEQYDWTEKDYTVIPTFHPAAIFYNRKLLPLMEQDWDKIA 226 >gi|108800921|ref|YP_641118.1| uracil-DNA glycosylase superfamily protein [Mycobacterium sp. MCS] gi|119870061|ref|YP_940013.1| uracil-DNA glycosylase superfamily protein [Mycobacterium sp. KMS] gi|126436546|ref|YP_001072237.1| uracil-DNA glycosylase superfamily protein [Mycobacterium sp. JLS] gi|108771340|gb|ABG10062.1| Uracil-DNA glycosylase superfamily [Mycobacterium sp. MCS] gi|119696150|gb|ABL93223.1| Uracil-DNA glycosylase superfamily [Mycobacterium sp. KMS] gi|126236346|gb|ABN99746.1| Uracil-DNA glycosylase superfamily [Mycobacterium sp. JLS] Length = 273 Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 28/249 (11%), Positives = 61/249 (24%), Gaps = 44/249 (17%) Query: 28 FDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSF 87 P+ + +S+A SL EL +L+ Sbjct: 1 MQSPHPRTGVPFSSPVPPGTGWPGDPATPATAVAASAAAVESLAAAVGSLDELDALVSVC 60 Query: 88 HDCHLC---------STSLSTI---------CATQTEGQDLMIIGYTPSDSD-NISGKPF 128 C S + +M++G P+ N +G+ F Sbjct: 61 RACPRLVEWREEAATVKRKSFVDQPYWGRPAPGWGDTHPRIMVVGLAPAAHGANRTGRVF 120 Query: 129 SG-KTGNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC 174 +G ++G+ L L + + + ++ P + E C Sbjct: 121 TGDRSGDFLFAALHRAGLANQSLCVDAADGLSLNDVRVAAAVRC-APPANAPTPAERATC 179 Query: 175 RPIIMRQIE--LISPKILLFIGNKTKNFFF------NNDAQKTYQNLGKWSNLCTPHSII 226 P + + ++++ +G G + + Sbjct: 180 APWLDAEWRLVSGDVRVVIALGGFAWKAALHMLRRGGASVPVPAPQFGHLAEAAI--DGV 237 Query: 227 PTLATVHPQ 235 + HP Sbjct: 238 TLMGCYHPS 246 >gi|237736711|ref|ZP_04567192.1| DNA polymerase [Fusobacterium mortiferum ATCC 9817] gi|229420573|gb|EEO35620.1| DNA polymerase [Fusobacterium mortiferum ATCC 9817] Length = 196 Score = 77.9 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 61/174 (35%), Gaps = 12/174 (6%) Query: 95 TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154 + T+ + D++ IG P N K +G L K+ I +I+ Sbjct: 26 SERKTLIGSGNREADILFIGDDPDLYQNEDLKVAPSSSGEFLIKLCDIEGITPDDYYITT 85 Query: 155 ISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLG 214 ++ E E + ++ QI L+ PKI++ +G++ + D + + G Sbjct: 86 LAK-KDCKFSEFMEEEREQLKELLNLQIALVKPKIIVVLGSEVAETLLDRDVKL-GEERG 143 Query: 215 KWSNLCTPHSIIPTLATVHPQELI--QYPLIKK-----NTWHALITLKKALKNL 261 I L T + + KK W+ L LK+ L + Sbjct: 144 NILEWI---GGIKLLITYDVNFVKKSRNEAGKKSRAALEFWNDLKILKQELNKI 194 >gi|169245921|gb|ACA50942.1| glycosylase [Mycobacterium marinum DL240490] Length = 209 Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 64/176 (36%), Gaps = 9/176 (5%) Query: 79 ELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L + + + C + + I+G + S PF+G +G L Sbjct: 13 ALAAQIVACERCEGLNIPGKTQAAPGYGSVRSPVAIVGQSLCRQCMKSQVPFTGGSGRFL 72 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 D I + Q+ I+ + HPP NR + E+E C P + R++E++ P++++ +G Sbjct: 73 DAAFNLAGIAKKQVFITNVVHCHPPDNRPSHSHEIENCSPYLHRELEIVDPRLIIGLGRD 132 Query: 197 T------KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKN 246 G + T + HP +++ P ++ Sbjct: 133 AKGTLRSAYPAAKELPWPFTGAPGSGTQRTTSADLDLLFP-PHPSWIMRQPRDSRD 187 >gi|32266428|ref|NP_860460.1| hypothetical protein HH0929 [Helicobacter hepaticus ATCC 51449] gi|32262478|gb|AAP77526.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 209 Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 58/183 (31%), Gaps = 15/183 (8%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 + L+S++++ C+ L I P + F ++ Sbjct: 40 NNLESIIKNCSLCNRIKHCKEPSFGILNPQSQLCFITEIPLVDE---KGVFIQNKSALMI 96 Query: 138 KMLQSIEIMRTQIHIS--MISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 + + HIS + N L + C + Q++ I+PK+ + +GN Sbjct: 97 QNIIHNVFRLQMGHISLLSLVKC-DAHNPYLDKSNILSCMGFCLTQLQKITPKVCILLGN 155 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 + + W N L T EL++ P +KK + + K Sbjct: 156 QVAEHILGQRL---EHSRILWHNNK------KFLITHSLNELVRNPSLKKEAHNDFLIAK 206 Query: 256 KAL 258 L Sbjct: 207 GQL 209 >gi|119873404|ref|YP_931411.1| uracil-DNA glycosylase superfamily protein [Pyrobaculum islandicum DSM 4184] gi|119674812|gb|ABL89068.1| Uracil-DNA glycosylase superfamily [Pyrobaculum islandicum DSM 4184] Length = 210 Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 30/211 (14%), Positives = 69/211 (32%), Gaps = 35/211 (16%) Query: 76 SLHELKSLLRSFHDCH-LCSTSL--------STICATQTEGQDLMIIGYTPSDS-DNISG 125 + L + C L + + +M++G P+ N +G Sbjct: 2 DFEDFLRKLTACRACPRLVEYRSSFPPGYWAKPVPPWGS--GPIMVVGLAPAAHGGNRTG 59 Query: 126 KPFSG-KTGNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLSNIEM 171 + F+G ++ L K L + + ++I+ PPGN + E+ Sbjct: 60 RMFTGDRSSQNLFKALYEAGLASRPYSISRDDGVELYGVYITSAVKCAPPGN-KPTAEEV 118 Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKW-SNLCTPHSIIPTLA 230 + C + ++E++ P++++ +G + G++ + + Sbjct: 119 KNCSRWLREEVEIVKPRVVVALGRVAWRAV-----SEILGVRGEFRHGAVVEKDGVYLVG 173 Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALKNL 261 HP + + L + K K L Sbjct: 174 AYHPSP--RNINTGRIAVEELAEVFKLAKKL 202 >gi|183984152|ref|YP_001852443.1| hypothetical protein MMAR_4181 [Mycobacterium marinum M] gi|183177478|gb|ACC42588.1| conserved hypothetical protein [Mycobacterium marinum M] Length = 275 Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 32/247 (12%), Positives = 68/247 (27%), Gaps = 39/247 (15%) Query: 25 YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLL 84 V P + + + + + +A +A S+ EL + + Sbjct: 4 DRVLTHP--RTGQPFGSPVRPGTGWPGDPASSQTPVAAEAARVAELAGRAGSIVELDAAI 61 Query: 85 RSFHDCHLCSTSL------------------STICATQTEGQDLMIIGYTPSDSD-NISG 125 C T + +E L+I+G P+ N +G Sbjct: 62 SVCRACPRLVTWREEVAVAKRRAFADQPYWGRPVPGWGSERPWLLIVGLAPAAHGANRTG 121 Query: 126 KPFSG-KTGNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGNRNLSNIEM 171 + F+G ++G+ L L + + +I I P + E Sbjct: 122 RMFTGDRSGDQLYAALHRAGLVSQPTSVDAADGLRAERIRIVAPVRC-APPANAPTPAER 180 Query: 172 EICRPIIMRQIE--LISPKILLFIGNKTKNFFFNNDAQ-KTYQNLGKWSNLCTPHSIIPT 228 + C P + + ++++ +G + + S + Sbjct: 181 KTCAPWLDAEWRLVSHDVRVIVALGGFAWKVALGLPGSLGAPRPRFGHGVVAELGSGVQL 240 Query: 229 LATVHPQ 235 L HP Sbjct: 241 LGCYHPS 247 >gi|163791085|ref|ZP_02185505.1| DNA polymerase, bacteriophage-type [Carnobacterium sp. AT7] gi|159873641|gb|EDP67725.1| DNA polymerase, bacteriophage-type [Carnobacterium sp. AT7] Length = 216 Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 66/193 (34%), Gaps = 31/193 (16%) Query: 99 TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158 + ++IG P +++ ++G PFSG+ G L + +E+ R +++I+ Sbjct: 25 FVYGQGPVNPKFLLIGEAPGETEALNGIPFSGRAGKELMRFFDLLEVDRKEVYITSAFRS 84 Query: 159 HPP-----------------GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 P NR + E+ P++ +++E + +L +GN Sbjct: 85 RPYRYKEKIDRKTKQVVLRKYNRPPTKQELIAHAPLLDQEVEKVQAPYILTMGNIGLQRL 144 Query: 202 FNNDAQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTW 248 A+ + Q G+ +T HP + + + Sbjct: 145 LGPKAKVSAQ-HGQLYKGPVLRLVSLKDNTYTWTEKDYAVFSTFHPAAIFYNRQLLETIH 203 Query: 249 HALITLKKALKNL 261 L KK + + Sbjct: 204 EDLAEFKKLIHKI 216 >gi|184200442|ref|YP_001854649.1| uracil-DNA glycosylase [Kocuria rhizophila DC2201] gi|183580672|dbj|BAG29143.1| uracil-DNA glycosylase [Kocuria rhizophila DC2201] Length = 282 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 28/252 (11%), Positives = 57/252 (22%), Gaps = 44/252 (17%) Query: 25 YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLL 84 P+ + + +A A + +L ++ Sbjct: 4 DAAHPLPHPLTGQPFPSPVPPGTGWPEDPAATDTPVAHDAAAVRDLAATAEDVDQLNAMA 63 Query: 85 RSFHDCHLCSTSL------------------STICATQTEGQDLMIIGYTPSDS-DNISG 125 C + + + +IG P+ + N +G Sbjct: 64 SVCRACERLVQWREDVAETKRASFAGEPYWGRPVPSYGDPRARVAVIGLAPAANGGNRTG 123 Query: 126 KPFSGKT-GNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSNIEM 171 + F+G G+ + L + + PP + E Sbjct: 124 RMFTGDRAGDWIYAALHRAGFAEHETVSTAGDGQALHGVRMVAPVRCAPP-ANKPTPDEK 182 Query: 172 EICRPIIMRQIE-LISPKILLFIGNKTKNFFFNN--------DAQKTYQNLGKWSNLCTP 222 C R+I L + +L +G + G L TP Sbjct: 183 AACGGWFDREIALLTELRGILALGGIAWQTVLAAAVRMGWEVPRPRPKFGHGVVVPLRTP 242 Query: 223 -HSIIPTLATVH 233 + + H Sbjct: 243 DGRDVRLVGCYH 254 >gi|146303503|ref|YP_001190819.1| uracil-DNA glycosylase superfamily protein [Metallosphaera sedula DSM 5348] gi|145701753|gb|ABP94895.1| Uracil-DNA glycosylase superfamily [Metallosphaera sedula DSM 5348] Length = 217 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 63/214 (29%), Gaps = 37/214 (17%) Query: 75 CSLHELKSLLRSFHDCHLCS--------TSL--------STICATQTEGQDLMIIGYTPS 118 + EL L + + C + L+I+G P+ Sbjct: 4 ADISELNRTLLACNLCPRLRAFAEDVALNRRRFNQEYWGKPVPGFGDPRAKLLIVGLAPA 63 Query: 119 DS-DNISGKPFSG-KTGNMLDKML-------------QSIEIMRTQIHISMISPWHPPGN 163 N +G+PF+G +TG + L + ++ + ++ PP N Sbjct: 64 AHGGNRTGRPFTGDETGKWVIGGLYELGLSNLREGVSRDDGLVLKGVFLTNAVSCAPPKN 123 Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH 223 + + + L K++L +G+ K K T Sbjct: 124 MVRTQEIVNCSTHLKETVELLRELKVILALGSVAFRSVSLVLGVKENFAHLKV----TSK 179 Query: 224 SIIPTLATVHPQELIQYPLIKKNTWHALITLKKA 257 I + + HP L + TW + + + Sbjct: 180 RGIYLVGSYHPSPL--NTRTGRLTWEEWLRVLRY 211 >gi|257467945|ref|ZP_05632041.1| DNA polymerase [Fusobacterium ulcerans ATCC 49185] gi|317062231|ref|ZP_07926716.1| DNA polymerase [Fusobacterium ulcerans ATCC 49185] gi|313687907|gb|EFS24742.1| DNA polymerase [Fusobacterium ulcerans ATCC 49185] Length = 202 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 62/169 (36%), Gaps = 12/169 (7%) Query: 97 LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156 + + + ++ IG P N K SG +G L K+ I+ + +I+ ++ Sbjct: 30 RKLLIGSGNKDASVLFIGDDPDLYQNEDLKVASGSSGEFLIKLCDIEGILPDEYYITTLA 89 Query: 157 PWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKW 216 R+ + ++ QI LI+P+I++ +G + + K + GK+ Sbjct: 90 K-KDCKFRDYMEDDQNELMEMLDMQIALINPEIVVALGPEAARALLKRE-VKIGEERGKF 147 Query: 217 SNLCTPHSIIPTLATVHPQELI--QYPLIKK-----NTWHALITLKKAL 258 I L T + + KK W L LK+ + Sbjct: 148 IQWT---GGIKLLLTYDVNFVKKSRNDSGKKSKVAIEFWADLKLLKEEM 193 >gi|224372334|ref|YP_002606706.1| DNA polymerase, bacteriophage-type [Nautilia profundicola AmH] gi|223589418|gb|ACM93154.1| DNA polymerase, bacteriophage-type [Nautilia profundicola AmH] Length = 195 Score = 77.1 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 36/159 (22%), Positives = 62/159 (38%), Gaps = 9/159 (5%) Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH-ISMISPWHPPGNRN 165 +MIIG P ++ +PF GK G L ++++ R + I+ P+ Sbjct: 41 SNPIMIIGEAPGANEVRLKQPFVGKAGENLAYLIETSGFDRAKDFLITNAFPFRTFEGNK 100 Query: 166 ---LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP 222 E++ ++ R+IE++ P+++L +GN F K +NL K Sbjct: 101 NRTPKAGELKTGAKLLEREIEIVKPRLILLLGNSAIKAFSYIPWAKDVKNLQKCGIYDIN 160 Query: 223 HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 HP L +K+ +L K LK L Sbjct: 161 --GYKVGLCFHPSPLAFN---RKDIRESLENFFKGLKTL 194 >gi|253583417|ref|ZP_04860615.1| DNA polymerase [Fusobacterium varium ATCC 27725] gi|251833989|gb|EES62552.1| DNA polymerase [Fusobacterium varium ATCC 27725] Length = 203 Score = 76.7 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 64/171 (37%), Gaps = 12/171 (7%) Query: 95 TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154 + + + + ++ IG P N K SG +G L K+ I+ + +I+ Sbjct: 29 AARKLLIGSGNKEASVLFIGDDPELYQNEDLKVASGSSGEFLIKLCDIEGILPDEYYITT 88 Query: 155 ISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLG 214 ++ R+ + ++ QI LI+P+I++ +G++ + K + G Sbjct: 89 LAK-KDCKFRDYMEDDQNELLEMLDMQIALINPEIVVALGSEAARALLKRE-VKIGEERG 146 Query: 215 KWSNLCTPHSIIPTLATVHPQELI--QYPLIKK-----NTWHALITLKKAL 258 K+ I L T + + KK W L LK+ + Sbjct: 147 KFIQWV---GGIKLLLTYDVNFVKKSRNDSGKKSKVAIEFWSDLKLLKEEM 194 >gi|41408613|ref|NP_961449.1| hypothetical protein MAP2515c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396971|gb|AAS04832.1| hypothetical protein MAP_2515c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 314 Score = 76.7 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 31/245 (12%), Positives = 69/245 (28%), Gaps = 39/245 (15%) Query: 27 VFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRS 86 V + P + + + Q ++A+ A ++ EL +L+ Sbjct: 45 VLEHP--RTGQAFDSPVPAGSGWPGDPATPQTPVAADADQVIALARHAGAIPELDALVSV 102 Query: 87 FHDCHLCSTSL------------------STICATQTEGQDLMIIGYTPSDSD-NISGKP 127 C + + + L+I+G P+ N +G+ Sbjct: 103 CRACPRLVEWREEVAVVKRRAFADQPYWGRPVPSWGSARPRLLIVGLAPAAHGANRTGRM 162 Query: 128 FSG-KTGNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173 F+G ++G+ L L + + I I PP + +E + Sbjct: 163 FTGDRSGDQLYAALYRAGLVNQPTSVDAADGLRTKHIRIVAPVHCAPP-ANVPTPVERDT 221 Query: 174 CRPIIMRQIE--LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP-HSIIPTLA 230 C P + + ++++ +G + + + L Sbjct: 222 CWPWLQAEWRLISEHVRVVVALGGFGWQIALRLPGVPAARKPRFGHGVVAELAPGVRLLG 281 Query: 231 TVHPQ 235 HP Sbjct: 282 CYHPS 286 >gi|253827782|ref|ZP_04870667.1| uracil-DNA glycosylase [Helicobacter canadensis MIT 98-5491] gi|313141999|ref|ZP_07804192.1| uracil-DNA glycosylase [Helicobacter canadensis MIT 98-5491] gi|253511188|gb|EES89847.1| uracil-DNA glycosylase [Helicobacter canadensis MIT 98-5491] gi|313131030|gb|EFR48647.1| uracil-DNA glycosylase [Helicobacter canadensis MIT 98-5491] Length = 216 Score = 76.3 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 60/189 (31%), Gaps = 13/189 (6%) Query: 73 KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 + + L ++ C + L+ + TP F K Sbjct: 37 PSQNQKNLNQAIKECQLCPQKLS--QPHIGLCNPHSKLLFLTITPLLDLQTR---FVSKG 91 Query: 133 GNMLDKMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191 ML K++++ + Q+ I + P N + C ++Q+E K ++ Sbjct: 92 ALMLKKIIENVFALPLQQVSILSLLKCEIPK--NTQEECTKNCMGYFLKQLEFSQSKTIV 149 Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 +G + N D GK + T +L++ P +K Sbjct: 150 ILGEEVYNA-LTQDKTPYKNIQGKLFKWNH----LKLFPTFSLAQLLRQPELKIQAHKEF 204 Query: 252 ITLKKALKN 260 +TLKK L Sbjct: 205 LTLKKDLYE 213 >gi|224418468|ref|ZP_03656474.1| uracil-DNA glycosylase [Helicobacter canadensis MIT 98-5491] Length = 250 Score = 76.3 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 60/189 (31%), Gaps = 13/189 (6%) Query: 73 KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 + + L ++ C + L+ + TP F K Sbjct: 71 PSQNQKNLNQAIKECQLCPQKLS--QPHIGLCNPHSKLLFLTITPLLDLQTR---FVSKG 125 Query: 133 GNMLDKMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191 ML K++++ + Q+ I + P N + C ++Q+E K ++ Sbjct: 126 ALMLKKIIENVFALPLQQVSILSLLKCEIPK--NTQEECTKNCMGYFLKQLEFSQSKTIV 183 Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 +G + N D GK + T +L++ P +K Sbjct: 184 ILGEEVYNA-LTQDKTPYKNIQGKLFKWNH----LKLFPTFSLAQLLRQPELKIQAHKEF 238 Query: 252 ITLKKALKN 260 +TLKK L Sbjct: 239 LTLKKDLYE 247 >gi|118464467|ref|YP_880649.1| uracil-DNA glycosylase [Mycobacterium avium 104] gi|118165754|gb|ABK66651.1| uracil-DNA glycosylase superfamily protein [Mycobacterium avium 104] Length = 275 Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 31/245 (12%), Positives = 69/245 (28%), Gaps = 39/245 (15%) Query: 27 VFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRS 86 V + P + + + Q ++A+ A ++ EL +L+ Sbjct: 6 VLEHP--RTGQAFDSPVPAGSGWPGDPATPQTPVAADADQVIALARHAGAIPELDALVSV 63 Query: 87 FHDCHLCSTSL------------------STICATQTEGQDLMIIGYTPSDSD-NISGKP 127 C + + + L+I+G P+ N +G+ Sbjct: 64 CRACPRLVEWREEVAVVKRRAFADQPYWGRPVPSWGSARPRLLIVGLAPAAHGANRTGRM 123 Query: 128 FSG-KTGNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173 F+G ++G+ L L + + I I PP + +E + Sbjct: 124 FTGDRSGDQLYAALYRAGLVNQPTSVDAADGLRTKHIRIVAPVHCAPP-ANAPTPVERDT 182 Query: 174 CRPIIMRQIE--LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP-HSIIPTLA 230 C P + + ++++ +G + + + L Sbjct: 183 CWPWLQAEWRLISEHVRVVVALGGFGWQIALRLPGVPAARKPRFGHGVVAELAPGVRLLG 242 Query: 231 TVHPQ 235 HP Sbjct: 243 CYHPS 247 >gi|15827545|ref|NP_301808.1| hypothetical protein ML1105 [Mycobacterium leprae TN] gi|221230022|ref|YP_002503438.1| hypothetical protein MLBr_01105 [Mycobacterium leprae Br4923] gi|15214375|sp|Q9CC91|Y1105_MYCLE RecName: Full=Uncharacterized protein ML1105 gi|13093095|emb|CAC31486.1| conserved hypothetical protein [Mycobacterium leprae] gi|219933129|emb|CAR71200.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length = 229 Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 31/202 (15%), Positives = 62/202 (30%), Gaps = 37/202 (18%) Query: 70 IAQKACSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLM 111 ++ A S+ EL + + C + +E L+ Sbjct: 2 LSGGAGSIPELNAQISVCRACPRLVDWREEVAVVKRRAFADQPYWGRPVPGWGSEQPRLL 61 Query: 112 IIGYTPSDSD-NISGKPFSG-KTGNMLDKMLQ-------------SIEIMRTQIHISMIS 156 I+G P+ N +G+ F+G ++G+ L L + + QI I+ Sbjct: 62 IVGLAPAAHGANRTGRMFTGDRSGDQLYAALHRAGLVNLPISMDAADGLQANQIRITAPV 121 Query: 157 PWHPPGNRNLSNIEMEICRPIIMRQIE--LISPKILLFIGNKTKNFFFNNDA-QKTYQNL 213 PPGN + E C P + + + ++ +G + Sbjct: 122 RCAPPGN-APTQAEWVTCSPWLEAEWRLVSEYVRAIVALGGFAWQIVLRLPGVSAMRKPR 180 Query: 214 GKWSNLCTPHSIIPTLATVHPQ 235 + ++ + L HP Sbjct: 181 FSHGVVAQLYAGVRLLGCYHPS 202 >gi|322368684|ref|ZP_08043251.1| uracil-DNA glycosylase superfamily [Haladaptatus paucihalophilus DX253] gi|320551415|gb|EFW93062.1| uracil-DNA glycosylase superfamily [Haladaptatus paucihalophilus DX253] Length = 209 Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 58/163 (35%), Gaps = 14/163 (8%) Query: 85 RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK-TGNMLDKMLQSI 143 +C LC+ + D + +G PS + +G PF+G G L +L + Sbjct: 16 EECTNCDLCNRRERVVHGYGDVDADFLFVGEMPSAGADETGVPFTGDAAGERLQGLLGRL 75 Query: 144 EIMRTQ----------IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 + + ++ ++ H P ++ E+ C P + +I +I+P+IL+ + Sbjct: 76 GMNESPADAEEPEIENAFLTYLTRCHHPER-PPNDGEIMTCEPYLNAEIRMINPEILVPV 134 Query: 194 GNKTKNFFFNNDAQKTYQNLGKW--SNLCTPHSIIPTLATVHP 234 G K ++ + +HP Sbjct: 135 GAGALAEIAAEYTTKPAADIDIVDDHATTIRGRGFELVPMIHP 177 >gi|182412764|ref|YP_001817830.1| uracil-DNA glycosylase superfamily protein [Opitutus terrae PB90-1] gi|177839978|gb|ACB74230.1| Uracil-DNA glycosylase superfamily [Opitutus terrae PB90-1] Length = 204 Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 65/171 (38%), Gaps = 10/171 (5%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 ++ + L + C C L + + ++++G P D + G+PF+ G Sbjct: 2 PNVAAIARHLTALSACRRCPAMLKPVVVGRPVPSRIILVGQAPGDKEPKLGRPFAWTAGK 61 Query: 135 MLDKML-QSIEI----MRTQIHISMISPWHP-----PGNRNLSNIEMEICRPIIMRQIEL 184 L K +++ R +I+ + + P G+R + E+ C + R+ EL Sbjct: 62 TLFKWFNEALGWTEDETRNRIYFAAVCRCFPGKRPEGGDRVPNPEEIANCASWLEREFEL 121 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 + P ++L +G F + +G+ + + + HP Sbjct: 122 LQPALVLPVGKLAIGRFLPLPLAPLHDIIGRKFAIEFHGHRLDCIPLPHPS 172 >gi|18312559|ref|NP_559226.1| uracil-DNA glycosylase [Pyrobaculum aerophilum str. IM2] gi|18160026|gb|AAL63408.1| uracil-DNA glycosylase (Pa-UDGb) [Pyrobaculum aerophilum str. IM2] Length = 226 Score = 75.9 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 29/211 (13%), Positives = 61/211 (28%), Gaps = 37/211 (17%) Query: 78 HELKSLLRSFHDCHL----------------CSTSLSTICATQTEGQDLMIIGYTPSDS- 120 + + L + C S + +M++G P+ Sbjct: 14 DDFVNRLVNCARCPRLVSYRSTVKPLRRYESWSYWGRPVPPWGDLNARVMVVGLAPAAHG 73 Query: 121 DNISGKPFSGKTG-NMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNL 166 N +G+ F+G L K L + + ++I+ PP N Sbjct: 74 GNRTGRMFTGDASAQNLFKALFLLGLSNKPYSVSRDDGVEVRCVYITSAVKCAPPKN-RP 132 Query: 167 SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII 226 + E+ C + ++E + P+ ++ +G T + + Sbjct: 133 TAEEVYNCSSWLREELEAVRPRAVVALGELAWRAVLKILGATTAAFK---HGEVVNAAGV 189 Query: 227 PTLATVHPQELIQYPLIKKNTWHALITLKKA 257 A+ HP L + T L + + Sbjct: 190 RVYASYHPSPL--NVNTGRLTVETLAEVLRR 218 >gi|237752932|ref|ZP_04583412.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] gi|229375199|gb|EEO25290.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] Length = 224 Score = 75.9 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 70/201 (34%), Gaps = 13/201 (6%) Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120 P ++ + +LK+++ S C S+ + + L+ + +P Sbjct: 33 EPQFLAPTQQRFQSQNSRDLKTIVESCKLCAQKSSEPN--FGLCNKNSKLVFVTLSPLFD 90 Query: 121 DNISGKPFSGKTGNMLDKMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIM 179 + F K ML +++ ++ ++ I + P +++E C + Sbjct: 91 GQMR---FGSKASIMLKNIIEGVFKLSLQEVSILSLLKCQIPKANEQASVE--SCMGYFL 145 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 +Q+E S K L+ G + + D + GK T LI+ Sbjct: 146 KQLEFCSAKTLVIFGAEA-YSYLTKDNKSYESVQGKLLKWNHCA----VFPTFALSLLIR 200 Query: 240 YPLIKKNTWHALITLKKALKN 260 P +K N + LK+ + Sbjct: 201 QPELKINAHREFLELKRLMGE 221 >gi|227496427|ref|ZP_03926713.1| uracil-DNA glycosylase superfamily protein [Actinomyces urogenitalis DSM 15434] gi|226834046|gb|EEH66429.1| uracil-DNA glycosylase superfamily protein [Actinomyces urogenitalis DSM 15434] Length = 277 Score = 75.9 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 37/263 (14%), Positives = 75/263 (28%), Gaps = 47/263 (17%) Query: 42 KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL---- 97 + +Q +A +A +L EL + + C Sbjct: 15 PVPPGTGWPGDPAQPTTAVAHDARQVRELALEA-TLAELDARVSVCRACPRLVAWREEVA 73 Query: 98 ---------------STICATQTEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKML 140 + + + ++G P+ + N +G+ F+G ++G+ L L Sbjct: 74 TTGRRASFARQPYWGRPVASLGPADAPIYVVGLAPAANGANRTGRMFTGDRSGDWLWAAL 133 Query: 141 QSIEIMRTQI-------------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP 187 + + PP + E C P I R+++L+ P Sbjct: 134 YRAGLAMQPTSLHAGDGQGLRGVRMGAAVRCAPP-ANKPTTAEQAACLPWIARELDLVRP 192 Query: 188 KILLFIGNKTKNFFF------NNDAQKTYQNLGKWSNL---CTPHSIIPTLATVHPQELI 238 ++LL +G + + G + + L + HP + Sbjct: 193 RVLLALGGIAWRTVLRLARDAGWQVPRPAPHFGHGAQALLTRLDGGQVTLLGSYHPSQ-- 250 Query: 239 QYPLIKKNTWHALITLKKALKNL 261 Q + T L + K L Sbjct: 251 QNTFTGRLTEEMLDQVLARAKAL 273 >gi|271969765|ref|YP_003343961.1| uracil-DNA glycosylase superfamily [Streptosporangium roseum DSM 43021] gi|270512940|gb|ACZ91218.1| uracil-DNA glycosylase superfamily [Streptosporangium roseum DSM 43021] Length = 266 Score = 75.9 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 31/236 (13%), Positives = 62/236 (26%), Gaps = 44/236 (18%) Query: 43 EKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL----- 97 + + +A + +L EL + C Sbjct: 5 PPGSGCWPDDPARPDTPVAHDPAEVGELAGASRTLAELTARQSVCRACPRLVEWREEVAT 64 Query: 98 -------------STICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQS 142 I E +++I+G P+ N +G+ F+G ++G+ L L Sbjct: 65 VKRRAFAGETYWGRPIAGWGDERPEVLIVGLAPAAHGGNRTGRIFTGDRSGDWLFGSLHR 124 Query: 143 -------------IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS--P 187 + PP E C P + R++ L++ Sbjct: 125 TGLAAQETSVRAGDGQRLIGARMVAAVRCAPP-ANKPEPSERAACFPWLSREVALVAGSV 183 Query: 188 KILLFIGNKTKNFF------FNNDAQKTYQNLGKWSNLCTPHSIIPT--LATVHPQ 235 ++++ +G D + G + + P L HP Sbjct: 184 RVVVALGGFAWQAVWPALKDAGYDLPRPRPPFGHGAEVEISRDGTPVRLLGCYHPS 239 >gi|254774286|ref|ZP_05215802.1| uracil-DNA glycosylase superfamily protein [Mycobacterium avium subsp. avium ATCC 25291] Length = 270 Score = 75.9 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 30/245 (12%), Positives = 69/245 (28%), Gaps = 39/245 (15%) Query: 27 VFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRS 86 + + P + + + Q ++A+ A ++ EL +L+ Sbjct: 1 MLEHP--RTGQAFDSPVPAGSGWPGDPATPQTPVAADADQVIALARHAGAIPELDALVSV 58 Query: 87 FHDCHLCSTSL------------------STICATQTEGQDLMIIGYTPSDSD-NISGKP 127 C + + + L+I+G P+ N +G+ Sbjct: 59 CRACPRLVEWREEVAVVKRRAFADQPYWGRPVPSWGSARPRLLIVGLAPAAHGANRTGRM 118 Query: 128 FSG-KTGNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173 F+G ++G+ L L + + I I PP + +E + Sbjct: 119 FTGDRSGDQLYAALYRAGLVNQPTSVDAADGLRTKHIRIVAPVHCAPP-ANAPTPVERDT 177 Query: 174 CRPIIMRQIE--LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP-HSIIPTLA 230 C P + + ++++ +G + + + L Sbjct: 178 CWPWLQAEWRLISEHVRVVVALGGFGWQIALRLPGVPAARKPRFGHGVVAELAPGVRLLG 237 Query: 231 TVHPQ 235 HP Sbjct: 238 CYHPS 242 >gi|319779221|ref|YP_004130134.1| hypothetical protein TEQUI_1067 [Taylorella equigenitalis MCE9] gi|317109245|gb|ADU91991.1| hypothetical protein TEQUI_1067 [Taylorella equigenitalis MCE9] Length = 296 Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 85/225 (37%), Gaps = 11/225 (4%) Query: 41 RKEKSIDSAIQPITNIRHIHSPLVQQADSIA-QKACSLHELK-SLLRSFHDCHLCSTSL- 97 ++S + Q + +V + A SL EL ++++ D Sbjct: 75 APKESQNFNSQSFQDEVESVPEVVSSTEKHAIDSIKSLDELYFWYIKTYRDWGYAEDEHD 134 Query: 98 --STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMI 155 T+ LM+ +PS D + F GK G +L ML + + +I+ + + Sbjct: 135 LIKTVPKD-LTNVKLMVFEESPSMEDILVSTQFVGKPGTLLKNMLSQLSLSLDEIYTTSV 193 Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK 215 S + I ++IEL+ P+++ F NN Q Sbjct: 194 YKTDMTAPDEESRDLLVIEA--FKKEIELVDPQVIWCFDRSVLFKFLNNKKITIDQVR-- 249 Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 NL + P + +++P+ LI P+ KK+ W L + + L+N Sbjct: 250 -FNLSLNNKYYPIICSLNPRILISNPVQKKDAWRGLNLIAQELQN 293 >gi|167948628|ref|ZP_02535702.1| uracil-DNA glycosylase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 205 Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 64/157 (40%), Gaps = 11/157 (7%) Query: 88 HDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM- 146 C C + + Q +M+IG P D + +G PF+ G L K Q I + Sbjct: 15 RACQRCPQMIGPVVTGQPALSAVMLIGQAPGDREGPAGHPFAWTAGKTLFKWFQQIGMDE 74 Query: 147 ---RTQIHISMISPWHP-----PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTK 198 R+Q++++ + P G+R + E+ C + + EL+ P++L+ +G Sbjct: 75 AQFRSQVYMAAVCRCFPGKKPKGGDRVPNKQEITHCADWMRSEFELLQPRLLIPVGKLAI 134 Query: 199 NFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 F + + +G+ ++ S + HP Sbjct: 135 EQF--CHFNRLTEVIGQCHSIDLNDSPADLIPLTHPS 169 >gi|283954522|ref|ZP_06372041.1| hypothetical protein C414_000230022 [Campylobacter jejuni subsp. jejuni 414] gi|283793926|gb|EFC32676.1| hypothetical protein C414_000230022 [Campylobacter jejuni subsp. jejuni 414] Length = 206 Score = 75.2 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 63/192 (32%), Gaps = 14/192 (7%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEG---QDLMIIGYTPSDSDNISGKPF 128 ++ + ELK L+ S C T + L+I+ S+N SG Sbjct: 24 EQTQNFEELKQLVSSCTLCQFSKTRK---FSLIEPKMKNAKLLILDVFGQRSENDSGILL 80 Query: 129 SGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188 + K G L + I +R + + ++ C P +++LI P Sbjct: 81 NSKKGEKLKYYIHQILGLRDEDFYFSYLFKCFCNG-KFDDFSLQSCLPFFWNELKLIQPA 139 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW 248 LL +G T Q + G+ + + + + P K+N Sbjct: 140 FLLCLGEYTFKSL---GFQDYHILKGEVFTY----KNFFIMPSYDLDFIEKNPSYKENFI 192 Query: 249 HALITLKKALKN 260 L LK +K Sbjct: 193 QDLKKLKDFMKK 204 >gi|332795819|ref|YP_004457319.1| uracil-DNA glycosylase superfamily [Acidianus hospitalis W1] gi|332693554|gb|AEE93021.1| uracil-DNA glycosylase superfamily [Acidianus hospitalis W1] Length = 222 Score = 75.2 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 31/214 (14%), Positives = 69/214 (32%), Gaps = 41/214 (19%) Query: 82 SLLRSFHDCHL------------------CSTSLSTICATQTEGQDLMIIGYTPSDS-DN 122 + S + C + E L+I+G P+ N Sbjct: 12 DEIISCYRCPRLRQYSEMIAKIKVKRFRNWEYWGKPLPGYGDENASLLIVGLAPAAHGGN 71 Query: 123 ISGKPFSG-KTGNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSN 168 +G+ F+G ++G + K L + + + +++ PP N Sbjct: 72 RTGRVFTGDESGKWVTKALYELGLSNLEFSLSREDNLILRGVYLTNAVKCAPPEN-KPLR 130 Query: 169 IEMEICRPIIMRQIEL-ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227 E+ C + ++I + K++L +G + +K + G ++ Sbjct: 131 EEILNCNYYLRKEITSLRNLKVILALGKIAFDSVCIAFNEKCKFSHGVVYDV----KGKK 186 Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + + HP Q + TW + + + + L Sbjct: 187 IVGSYHPSA--QNTKTGRLTWESFMQVVRKAYEL 218 >gi|145222824|ref|YP_001133502.1| uracil-DNA glycosylase superfamily protein [Mycobacterium gilvum PYR-GCK] gi|315443290|ref|YP_004076169.1| uracil-DNA glycosylase [Mycobacterium sp. Spyr1] gi|145215310|gb|ABP44714.1| Uracil-DNA glycosylase superfamily [Mycobacterium gilvum PYR-GCK] gi|315261593|gb|ADT98334.1| uracil-DNA glycosylase [Mycobacterium sp. Spyr1] Length = 282 Score = 75.2 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 33/248 (13%), Positives = 68/248 (27%), Gaps = 44/248 (17%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P+ + + R + Q ++A A +L +L + + C Sbjct: 10 PHPRTGDLFETPVRPGRGWPGDPATSRTAVASNPAQVTALAAAAKNLRQLDAGVSVCRAC 69 Query: 91 HLCSTSL------------------STICATQTEGQDLMIIGYTPSDSD-NISGKPFSG- 130 + ++I+G P+ N +G+ F+G Sbjct: 70 PRLVEWREEAASVKRKSYADQPYWGRPAPGFGSARPRILIVGLAPAAHGANRTGRVFTGD 129 Query: 131 KTGNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177 ++G+ L L + + + ++ PP N S E C P Sbjct: 130 RSGDFLFASLHRSGLANQSTCTDSADGLELNDVRVAAAVRCAPPDN-APSPAERTTCAPW 188 Query: 178 IMRQIE--LISPKILLFIGNKTKNFFF------NNDAQKTYQNLGK--WSNLCTPHSIIP 227 + + ++++ +G G + L TP + Sbjct: 189 LDAEYRLTGTDVRVIVALGGFAWQVVLAMVRRTGGTVPVPAPKFGHAATAELATPRGAVT 248 Query: 228 TLATVHPQ 235 L HP Sbjct: 249 VLGCFHPS 256 >gi|156564027|ref|YP_001429769.1| uracil-DNA glycosylase [Bacillus phage 0305phi8-36] gi|154622724|gb|ABS83604.1| uracil-DNA glycosylase [Bacillus phage 0305phi8-36] Length = 205 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 62/167 (37%), Gaps = 7/167 (4%) Query: 96 SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMI 155 T+ ++ T ++MI+ P S+ I G G G L +L + I + ++ + + Sbjct: 43 RQGTVISSGTMTPEVMIVSDKPEQSEEIFGFSGFGMYGFYLMNLLDRVGIKISDVYWTQV 102 Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK 215 ++ ++ + +I + P +++ +G + K +G+ Sbjct: 103 FK---EPVEAVNMSLIKDWYKYLHNEIVVTKPTVIIALGTTAISA-LAQQPIKIDTAIGE 158 Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLIKKNT---WHALITLKKALK 259 + + IP + HP+ + K T W ++ + L Sbjct: 159 EFDFDLGNKSIPVIPVYHPRNFLDTEEFKARTNDLWGSIKPIADMLA 205 >gi|253701154|ref|YP_003022343.1| phage SPO1 DNA polymerase-related protein [Geobacter sp. M21] gi|251776004|gb|ACT18585.1| phage SPO1 DNA polymerase-related protein [Geobacter sp. M21] Length = 212 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 30/257 (11%), Positives = 82/257 (31%), Gaps = 52/257 (20%) Query: 2 TSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHS 61 +R + + +SGV + E KEK+ + + + Sbjct: 4 MDEREMVLGSLKGYLAELLESGVDELTFAQPAAGGREKGAKEKAPSTPAGAVPQAPTTPA 63 Query: 62 PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121 A + + L L+ + Sbjct: 64 APEAAAVLAEEGSLRLE-------------------------GDPRARLLFV-------- 90 Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ 181 + G F+G+ G +L+K++ ++ + ++ + E R + + Sbjct: 91 -MRGSGFAGEAGELLEKIVVAMGFGKGEVCLLSF-------------AAGEASRAAVAGR 136 Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241 I + P++++ +G + ++ + G++ +L I + T H + +++ Sbjct: 137 IAALDPEVVVSMGEEAT-ALLLDNEAPLQRLRGRFHDLA----GIALMPTHHAEAMLENQ 191 Query: 242 LIKKNTWHALITLKKAL 258 +K++ W+ + + L Sbjct: 192 GLKRDAWNDMQQVMGRL 208 >gi|284033566|ref|YP_003383497.1| Uracil-DNA glycosylase superfamily [Kribbella flavida DSM 17836] gi|283812859|gb|ADB34698.1| Uracil-DNA glycosylase superfamily [Kribbella flavida DSM 17836] Length = 276 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 33/236 (13%), Positives = 70/236 (29%), Gaps = 46/236 (19%) Query: 45 SIDSAIQPITNIRHIHSPLVQQADSIAQKA--CSLHELKSLLRSFHDCHLCSTSL----- 97 + + + +P+ + A + + A L EL + + C Sbjct: 15 PVPAGTGWPEDPAGRRTPVARDAGEVLELAGTDDLAELTARVSVCRACPRLVGWREDVAV 74 Query: 98 -------------STICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQS 142 I ++I+G P+ N +G+ F+G ++G+ L L Sbjct: 75 SKRKSFADQPYWGRPIAGWGAPDPRILIVGLAPAVHGGNRTGRVFTGDRSGDWLFASLHR 134 Query: 143 IEIMRTQI-------------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP-- 187 + + + PP S E + C P R++EL+ P Sbjct: 135 LGLANQPTSVHAGDGLRLIGARMIAAVRCAPP-ANKPSPDERDTCNPWFRRELELVLPTT 193 Query: 188 KILLFIGNKTKNFFF------NNDAQKTYQNLGKWSNL--CTPHSIIPTLATVHPQ 235 + ++ +G + + G + P + + + HP Sbjct: 194 RAIVCLGKFGFDVLLNALQEIGGTLPRPRPKFGHAAEYVVPVPGGEVTVIGSFHPS 249 >gi|322435048|ref|YP_004217260.1| Uracil-DNA glycosylase superfamily [Acidobacterium sp. MP5ACTX9] gi|321162775|gb|ADW68480.1| Uracil-DNA glycosylase superfamily [Acidobacterium sp. MP5ACTX9] Length = 291 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 27/258 (10%), Positives = 67/258 (25%), Gaps = 46/258 (17%) Query: 32 NNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSL----HELKSLLRSF 87 + + + P H + ++ +A SL ++ + Sbjct: 19 PDFQMHPELTPADLSLEVVSPTERDSHSDTLFPVSSNPVASSPTSLPPVLQSIRRNIVEC 78 Query: 88 HDCHLCS------------------TSLSTICATQTEGQDLMIIGYTPSDSD-NISGKPF 128 C + ++I+G P N +G+PF Sbjct: 79 TRCERLRLYGEAIGAARRRAYIDQVYWAKPVPGFGDPRARILILGLAPGAHGANRTGRPF 138 Query: 129 SGK-TGNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC 174 +G +G + +L + I+ + PPG++ Sbjct: 139 TGDGSGFFMYPVLHSLGLASQPTALSADDGLKLRHAWIASVVRCAPPGDKPTPQEVRNCS 198 Query: 175 RPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL------GKWSNLCTPHSIIPT 228 + L + ++ +G + + + G + P+ + Sbjct: 199 SHLAAEIAALPRIRTVVCLGKIAWDGYLAHLVNTGILQRRSPYVFGHEAEYILPN-GLHL 257 Query: 229 LATVHPQELIQYPLIKKN 246 L + HP ++ + Sbjct: 258 LGSYHPS--LRNTNTGRL 273 >gi|282853806|ref|ZP_06263143.1| uracil-DNA glycosylase, family 4 [Propionibacterium acnes J139] gi|282583259|gb|EFB88639.1| uracil-DNA glycosylase, family 4 [Propionibacterium acnes J139] Length = 278 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 34/273 (12%), Positives = 66/273 (24%), Gaps = 44/273 (16%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P+ + + + + A IA +L + + C Sbjct: 5 PHPRIATLFESPVAPGSGWPGDPASPDTPVAKSAEDAARIAASCSEFEDLDAAISVCRAC 64 Query: 91 HLCSTSL------------------STICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131 + + ++IIG P+ N +G+ F+G Sbjct: 65 PRLVKWREDIAVTKRAQWRDEPYWGRPVPSFGDPSARMVIIGLAPAAHGANRTGRMFTGD 124 Query: 132 -TGNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177 +G+ L + L + + I PP N + + Sbjct: 125 QSGDWLYRALYDADIASQAQSIDAADGLTLHDCRIIAPVHCAPPDNWPRPDEKRTCAIWF 184 Query: 178 IMRQIELISPKILLFIGNKTKNFFF--------NNDAQKTYQNLGKWSNLCTPHSIIPTL 229 L + + L+ +G G + + P I + Sbjct: 185 DDELARLAALRALMCLGQIAWTSTLAAARRLGWQVPRPAPRFGHGTRTQVVRPDGSIIVV 244 Query: 230 -ATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 H Q + T L L+NL Sbjct: 245 LGCYHVS--RQNTNTGRLTRSMLDDAVNTLRNL 275 >gi|241759522|ref|ZP_04757625.1| putative DNA polymerase, bacteriophage-type [Neisseria flavescens SK114] gi|241320079|gb|EER56440.1| putative DNA polymerase, bacteriophage-type [Neisseria flavescens SK114] Length = 253 Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 85/274 (31%), Gaps = 37/274 (13%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRH-- 58 M S R L + L + + + + +A S R + + Q + + Sbjct: 1 MLSSRYLHLHEALGLGPMWLNQNAKII--HAAPQAAAASVRPKTIVADTAQAVRTLSAGA 58 Query: 59 ------------IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTE 106 P V+ ++ + + ++ Sbjct: 59 HQARTAAIATAQTAKPAVRVPEAAPKTIVETPAKTEKAAHSDNLPRLDVTIRP------- 111 Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL 166 ++M++ PS D++ G FSG G +LD +L +I + Q H + P Sbjct: 112 -SEIMVVSICPSTEDSLHGTLFSGDVGTLLDNILAAIGLKPEQAHKTAWVKTAPVFTALP 170 Query: 167 SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII 226 + + ++ + +LF+G + +G + LC Sbjct: 171 DAEHIRSELAEMQNELTTSQARAVLFLGKI----------FDSPDMIGLMNELCAE---R 217 Query: 227 PTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 P HP L+ P +K W L LK+ L Sbjct: 218 PHFVIPHPARLLMQPQLKAQAWQILKPLKQLLAK 251 >gi|119715180|ref|YP_922145.1| uracil-DNA glycosylase superfamily protein [Nocardioides sp. JS614] gi|119535841|gb|ABL80458.1| Uracil-DNA glycosylase superfamily [Nocardioides sp. JS614] Length = 284 Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 77/253 (30%), Gaps = 45/253 (17%) Query: 27 VFDEPNNEATYESQRKEKSI-DSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLR 85 + P + S + + V++ + + L EL + + Sbjct: 4 LLPHPATRELFPSPVPPGTGWPGDPATERTPVATTAAQVRRLARVGEGVDELAELDARVS 63 Query: 86 SFHDCHLCSTSL------------------STICATQTEGQDLMIIGYTPSDSD-NISGK 126 C + T ++I+G P+ + N +G+ Sbjct: 64 VCRACPRLVRWREDVARDKRASFATEPYWGRPVPGWGTTDPSVLIVGLAPAANGANRTGR 123 Query: 127 PFSG-KTGNMLDKMLQSIEIMRTQ-------------IHISMISPWHPPGNRNLSNIEME 172 F+G ++G+ L L + + RT + PP N + +E + Sbjct: 124 IFTGDRSGDWLFAGLHRVGLARTATSTHADDGQELIGTRMIATVRCAPPQN-KPTVVERD 182 Query: 173 ICRPIIMRQIELISP--KILLFIGNKTKNFFF--------NNDAQKTYQNLGKWSNLCTP 222 C P ++ ++ L+ P ++++ +G + + G + L P Sbjct: 183 TCAPWLLAELGLVLPTVEVVVALGTFGWDATLRSFAGLGWQASRPRPRFGHGVETRLVGP 242 Query: 223 HSIIPTLATVHPQ 235 + L HP Sbjct: 243 GREVTLLGCYHPS 255 >gi|84497941|ref|ZP_00996738.1| hypothetical protein JNB_17678 [Janibacter sp. HTCC2649] gi|84381441|gb|EAP97324.1| hypothetical protein JNB_17678 [Janibacter sp. HTCC2649] Length = 291 Score = 74.4 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 34/281 (12%), Positives = 69/281 (24%), Gaps = 63/281 (22%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQR---KEKSIDSAIQPITNIR 57 MT++R +S G V + + Sbjct: 1 MTAERNIS--------------GTDGVTRVGPDRHPITGEPFLSPVPPGAGWPGDPATTD 46 Query: 58 HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI----------------- 100 + V ++A A +L E+ + + C T+ Sbjct: 47 TPVAHNVDDVHALAASALTLTEVDARVTVCRACPRLVDWRETVARHDRRASFADQPYWGR 106 Query: 101 --CATQTEGQDLMIIGYTPSDSD-NISGKPFSGK-TGNMLDKMLQSIEIMRTQI------ 150 + +I+G P+ + N +G+ F+G +G+ L L Sbjct: 107 PGPSFGDPDATALIVGLAPAANGTNRTGRMFTGDASGDFLYAALHRTGYANQPTSVGAGD 166 Query: 151 -------HISMISPWHPPGNRNLSNIEMEICRPIIMR--QIELISPKILLFIGNKTKNFF 201 I PPGN + E C + R ++ ++++ +G Sbjct: 167 GLELTGIRIVAAVRCAPPGN-VPTPTERATCATWLGRDLELLGDRLRVIMTLGEIGWKGV 225 Query: 202 ------FNNDAQKTYQNLGKWSNLCTP---HSIIPTLATVH 233 G + + + H Sbjct: 226 LAATTTLGWTVPAPRPKFGHATEAILRTPSGHPVRLIGCYH 266 >gi|322369980|ref|ZP_08044542.1| uracil DNA glycosylase [Haladaptatus paucihalophilus DX253] gi|320550316|gb|EFW91968.1| uracil DNA glycosylase [Haladaptatus paucihalophilus DX253] Length = 202 Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 22/167 (13%), Positives = 52/167 (31%), Gaps = 19/167 (11%) Query: 86 SFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSD----SDNISGKPFSGK------TGN 134 C L T D+M++G P ++ G ++G +G Sbjct: 12 DCSRCPELVECRNRISWGTGPRSADVMVVGEAPGAGAPDAEQWRGGNWTGMAYTTRHSGR 71 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPG----NRNLSNIEMEICRPIIMRQIELISPKIL 190 + + + + + P G NR E++ C + ++ + P ++ Sbjct: 72 KIRSLFSDLGY---DAYFTNAVKCFPEGEDGSNREPRAEELDNCFDHLRTELATVDPTVV 128 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSN-LCTPHSIIPTLATVHPQE 236 + G + ++ L + + + + L +HP Sbjct: 129 VSTGKHATKILLDFESIPMEGFLDRVLSPVECERLGVVLLPLLHPSY 175 >gi|86160389|ref|YP_467174.1| uracil-DNA glycosylase superfamily protein [Anaeromyxobacter dehalogenans 2CP-C] gi|85776900|gb|ABC83737.1| Uracil-DNA glycosylase superfamily [Anaeromyxobacter dehalogenans 2CP-C] Length = 211 Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 56/150 (37%), Gaps = 17/150 (11%) Query: 102 ATQTE------GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS-----IEIMRTQI 150 + +IG P + G+PF+ G L + L+ E++R ++ Sbjct: 25 GFGPPIHGPPVPSRIFLIGQAPGPHEARFGRPFAWTAGKTLFRWLERATGAGEELVRERV 84 Query: 151 HISMISPWHP-----PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 +IS + P G+R + E + R + R++E++ P++++ +G + Sbjct: 85 YISAVVRCFPGKAPGGGDRVPTPDECALWRGFVEREVEILRPRLVIPVGRLAIQEVLGHT 144 Query: 206 AQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 + +G+ + HP Sbjct: 145 -EPIAAVVGRTLRAYFHGVKTDVIPLPHPS 173 >gi|220919197|ref|YP_002494501.1| uracil-DNA glycosylase superfamily [Anaeromyxobacter dehalogenans 2CP-1] gi|219957051|gb|ACL67435.1| Uracil-DNA glycosylase superfamily [Anaeromyxobacter dehalogenans 2CP-1] Length = 211 Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 65/177 (36%), Gaps = 15/177 (8%) Query: 70 IAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTE-GQDLMIIGYTPSDSDNISGKPF 128 + + ++ L+++LR + +IG P + G+PF Sbjct: 1 MPRPPKTVTALEAVLRDVAAF---RPRGFGPPIHGPPVPSRIFLIGQAPGPHEARFGRPF 57 Query: 129 SGKTGNMLDKMLQS-----IEIMRTQIHISMISPWHP-----PGNRNLSNIEMEICRPII 178 + G L + L+ +++R +++IS + P G+R + E + R + Sbjct: 58 AWTAGKTLFRWLERATGAGEDLVRERVYISAVVRCFPGKAPGGGDRVPTPDECALWRGFV 117 Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 R++E++ P++++ +G + +G+ + HP Sbjct: 118 RREVEILRPRLVIPVGRLAIQEVLGRT-EPIAAVVGRTLRAYFHGVKTDVIPLPHPS 173 >gi|292656908|ref|YP_003536805.1| uracil DNA glycosylase [Haloferax volcanii DS2] gi|291370610|gb|ADE02837.1| uracil DNA glycosylase [Haloferax volcanii DS2] Length = 211 Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 60/158 (37%), Gaps = 24/158 (15%) Query: 86 SFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG-KTGNMLDKMLQSI 143 +C LC T + G + + +G P+ + +G PF+G + G + ++L + Sbjct: 17 DCTNCSGLCETREQVVHGYGDVGAEFLFVGEAPTAAAERTGVPFTGDEAGRRVQRILGDL 76 Query: 144 EIMR----------TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 +R + + ++ P S+ E+ C P + ++ +I+P I++ + Sbjct: 77 GFVRSEPDADEPDVQNVFFTYLTRCRHPDRG-PSDDEVATCEPYLNAEVRMINPHIIVPV 135 Query: 194 GNKTKNFF-----------FNNDAQKTYQNLGKWSNLC 220 G F+ DA+ G+ L Sbjct: 136 GQAALEALAFDYTTRAADSFDVDAEHATTIRGRGFELV 173 >gi|50842715|ref|YP_055942.1| uracil-DNA glycosylase [Propionibacterium acnes KPA171202] gi|50840317|gb|AAT82984.1| uracil-DNA glycosylase [Propionibacterium acnes KPA171202] Length = 278 Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 34/273 (12%), Positives = 67/273 (24%), Gaps = 44/273 (16%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P+ + + + + A IA +L + + C Sbjct: 5 PHPRIATLFESPVAPGSGWPGDPASPDTPVAKCAEDAARIAAHCSEFEDLDATISVCRAC 64 Query: 91 HLCSTSL------------------STICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131 + + ++IIG P+ N +G+ F+G Sbjct: 65 PRLVKWREDIAVTKRAQWRDEPYWGRPVPSFGDPSARMVIIGLAPAAHGANRTGRMFTGD 124 Query: 132 -TGNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177 +G+ L + L + + HI PP N + + Sbjct: 125 QSGDWLYRALYDADIASQAQSIDAADGLTLHDCHIIAPVHCAPPDNWPRPDEKRTCAIWF 184 Query: 178 IMRQIELISPKILLFIGNKTKNFFF--------NNDAQKTYQNLGKWSNLCTPHSIIPTL 229 L + + ++ +G G + L P I + Sbjct: 185 DDELARLTALRAVMCLGQIAWTSTLAAARRLGWQVPRPAPRFGHGTRTQLVRPDGSIIVV 244 Query: 230 -ATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 H Q + T L L++L Sbjct: 245 LGCYHVS--RQNTNTGRLTRSMLDDAVNTLRDL 275 >gi|197124467|ref|YP_002136418.1| uracil-DNA glycosylase superfamily protein [Anaeromyxobacter sp. K] gi|196174316|gb|ACG75289.1| Uracil-DNA glycosylase superfamily protein [Anaeromyxobacter sp. K] Length = 211 Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 66/177 (37%), Gaps = 15/177 (8%) Query: 70 IAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTE-GQDLMIIGYTPSDSDNISGKPF 128 + + ++ L+++LR + +IG P + G+PF Sbjct: 1 MPRPPKTVTALEAVLRDVAAF---RPRGFGPPIHGPPVASRIFLIGQAPGPHEARFGRPF 57 Query: 129 SGKTGNMLDKMLQS-----IEIMRTQIHISMISPWHP-----PGNRNLSNIEMEICRPII 178 + G L + L+ E++R +++IS + P G+R + E + R + Sbjct: 58 AWTAGKTLFRWLERATGAGEELVRERVYISAVVRCFPGKAPGGGDRVPTPDECALWRGFV 117 Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 R++E++ P++++ +G + + +G+ + HP Sbjct: 118 RREVEILRPRLVIPVGRLAIQEVLGHT-EPIAAVVGRTLRAYFHGVKTDVIPLPHPS 173 >gi|153003318|ref|YP_001377643.1| uracil-DNA glycosylase superfamily protein [Anaeromyxobacter sp. Fw109-5] gi|152026891|gb|ABS24659.1| Uracil-DNA glycosylase superfamily [Anaeromyxobacter sp. Fw109-5] Length = 220 Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 26/187 (13%), Positives = 67/187 (35%), Gaps = 28/187 (14%) Query: 65 QQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTE------GQDLMIIGYTPS 118 + + +L + +++F ++++G P Sbjct: 8 SRPRKASSVVAALEAVHRDIQAFR-----------PDGFGPPVHGPAVASRILLVGQAPG 56 Query: 119 DSDNISGKPFSGKTGNMLDKMLQ-----SIEIMRTQIHISMISPWHP-----PGNRNLSN 168 + G+PF+ G L + L+ + +R +++I+ + P G+R S Sbjct: 57 PHEARFGRPFAWTAGKTLFRWLERATGADEQTVRARVYIAAVVRCFPGKTTGGGDRVPSP 116 Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT 228 E + R + R++E+++P++++ +G + + +G+ + Sbjct: 117 EECALWRGFLAREVEILAPRLVIPVGRLAIQEVLGHT-EPIAAVVGRTLRTQFHGVNVDV 175 Query: 229 LATVHPQ 235 L HP Sbjct: 176 LPLPHPS 182 >gi|257075730|ref|ZP_05570091.1| uracil-DNA glycosylase [Ferroplasma acidarmanus fer1] Length = 220 Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 28/221 (12%), Positives = 60/221 (27%), Gaps = 43/221 (19%) Query: 76 SLHELKSLLRSFHDC-HLCSTS---------------LSTICATQTEGQDLMIIGYTPSD 119 ++ +L + S C L I + G ++I+G P+ Sbjct: 2 NIEKLNREIVSCRKCTRLVEYRSSRSPRAGFAGETYWNKPITGYGSIGSRILIVGLAPAF 61 Query: 120 S-DNISGKPFSGKT-GNMLDKMLQSIEIMRTQ-------------IHISMISPWHPPGNR 164 N +G+ F+G + L L + + +I++ PP N+ Sbjct: 62 DGGNRTGRIFTGDKSSDFLISSLYAAGLANMPTSERKDDGLKYIDTYITLALKCAPPDNK 121 Query: 165 NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK--WSNLCTP 222 ++ + K +L +G + G Sbjct: 122 PEKEELNNCSGFFEKEIEQMENLKAILCLGKIAFDSTLKFFRAHQINTRGIKFIHGKYYN 181 Query: 223 HSIIPTLATVHPQE------LIQYPLIKKNTWHALITLKKA 257 + + HP L++ K+ L ++ Sbjct: 182 IGGVRLYCSYHPSPRNVNTGLLR----KEEFISLLKKIRNF 218 >gi|291297008|ref|YP_003508406.1| Uracil-DNA glycosylase superfamily [Meiothermus ruber DSM 1279] gi|290471967|gb|ADD29386.1| Uracil-DNA glycosylase superfamily [Meiothermus ruber DSM 1279] Length = 221 Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 32/220 (14%), Positives = 61/220 (27%), Gaps = 38/220 (17%) Query: 76 SLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLMIIGYTP 117 SL L + L + C + ++I G P Sbjct: 2 SLEALYAQLTACRACPRLVVWREQVGREKRAAFRHTPYWAKPVPGFGDPKARILIFGLAP 61 Query: 118 SDSD-NISGKPFSGK-TGNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPG 162 N +G+PF+G +G+ L L + ++I+ PP Sbjct: 62 GAHGSNRTGRPFTGDASGDFLYPALYQAGLANQPTSSHLDDGLALEGVYITAAVRCAPPK 121 Query: 163 NRNLSNIEMEICRPIIMRQIE-LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221 N + +E+ C +++ L ++ L +G + + Sbjct: 122 N-KPTPLELRTCAGWTAQELALLPHLRVYLALGQIAHQALLAYHGLPRAHHPFR-HGGEY 179 Query: 222 PHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 L++ H Q K T + + K L Sbjct: 180 RVGERVLLSSYHVS--RQNTQTGKLTRPMFEAILERAKAL 217 >gi|332672180|ref|YP_004455188.1| Uracil-DNA glycosylase superfamily [Cellulomonas fimi ATCC 484] gi|332341218|gb|AEE47801.1| Uracil-DNA glycosylase superfamily [Cellulomonas fimi ATCC 484] Length = 257 Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 54/174 (31%), Gaps = 34/174 (19%) Query: 62 PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL------------------STICAT 103 A A +L EL L+ C + Sbjct: 13 DDATSNPMRAPSARTLAELDGLVVGCRACPRLVAWREHVAEVKRAAFRDETYWGRPVPGF 72 Query: 104 QTEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKMLQSIEI-------------MRT 148 D++++G P+ N +G+ F+G ++G+ L + Sbjct: 73 GDPRADVLVVGLAPAAHGANRTGRMFTGDRSGDFLFASMHRTGFASQALSVRADDGLTLD 132 Query: 149 QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202 I ++ PP N + E C P + R++ L+ P++++ +G Sbjct: 133 GIRVTAPVRCAPPEN-APTPQERRTCGPFLARELALVEPRVVVVLGGFGWQAVL 185 >gi|224438362|ref|ZP_03659289.1| hypothetical protein HcinC1_10256 [Helicobacter cinaedi CCUG 18818] gi|313144804|ref|ZP_07806997.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] gi|313129835|gb|EFR47452.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] Length = 208 Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 30/199 (15%), Positives = 73/199 (36%), Gaps = 16/199 (8%) Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120 + + S A ++ L +++ C+ + + + I P S Sbjct: 25 ANALFAPKSNAPIGQDINTL---IKNCSLCNRIKHCKTPNIGLINQNASVCFISEIPLVS 81 Query: 121 DNISGKPFSGKTGNMLDKMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIM 179 ++ + K+ ML ++ + ++ +Q+ I + N + E+ C+P ++ Sbjct: 82 ESQAFV--QNKSAIMLQNIISNVFKLSLSQVSILSLIKC-DSLNPHFEKSELLSCKPYVL 138 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 Q++ ++PK+ + +G+ + + W N L T EL++ Sbjct: 139 TQLQSLAPKLCVLLGDVVSEHILGSHL---EHSRILWHN------NRKFLVTYALNELVR 189 Query: 240 YPLIKKNTWHALITLKKAL 258 P +K + + K L Sbjct: 190 NPSLKAQAHNDFLIAKGQL 208 >gi|325969828|ref|YP_004246020.1| uracil-DNA glycosylase superfamily [Vulcanisaeta moutnovskia 768-28] gi|323709031|gb|ADY02518.1| Uracil-DNA glycosylase superfamily [Vulcanisaeta moutnovskia 768-28] Length = 220 Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 28/211 (13%), Positives = 62/211 (29%), Gaps = 38/211 (18%) Query: 78 HELKSLLRSFHDCHLCST----------------SLSTICATQTEGQ-DLMIIGYTPSDS 120 ++ S L C + L + +MI+G P+ Sbjct: 5 NDFISKLIECRACPRLVSYRERVKPLPRFMNDRYWLRPVPPWGDLNNARIMIVGLAPAAH 64 Query: 121 -DNISGKPFSGKTG-NMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRN 165 N +G+ F+G + L + L + +I+ + PP NR Sbjct: 65 GGNRTGRMFTGDSSAQFLFRALYEAGLSNKPYSISRNDGVTLKCIYITSVVKCVPPNNRP 124 Query: 166 LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI 225 + ++E + P+ ++ +G+ F + + S + Sbjct: 125 SNEELHTCIGNWFRYELEHVGPRAIIALGHIA---FLGIKLALGIRAEFRHSEY-IDFNG 180 Query: 226 IPTLATVHPQELIQYPLIKKNTWHALITLKK 256 I + HP + + L+ + + Sbjct: 181 IRIFMSYHPSP--RNTNTGRLRIRDLVNILR 209 >gi|289425152|ref|ZP_06426929.1| uracil-DNA glycosylase, family 4 [Propionibacterium acnes SK187] gi|289154130|gb|EFD02818.1| uracil-DNA glycosylase, family 4 [Propionibacterium acnes SK187] Length = 278 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 33/273 (12%), Positives = 66/273 (24%), Gaps = 44/273 (16%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P+ + + + + A IA +L + + C Sbjct: 5 PHPRIATLFESPVAPGSGWPGDPASPDTPVAKCAEDAARIAAHCSEFEDLDATISVCRAC 64 Query: 91 HLCSTSL------------------STICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131 + + ++IIG P+ N +G+ F+G Sbjct: 65 PRLVKWREDIAVTKRAQWRDEPYWGRPVPSFGDPSARMVIIGLAPAAHGANRTGRMFTGD 124 Query: 132 -TGNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177 +G+ L + L + + I PP N + + Sbjct: 125 QSGDWLYRALYDADIASQAQSIDAADGLTLHDCRIIAPVHCAPPDNWPRPDEKRTCAIWF 184 Query: 178 IMRQIELISPKILLFIGNKTKNFFF--------NNDAQKTYQNLGKWSNLCTPHSIIPTL 229 L + + ++ +G G + L P I + Sbjct: 185 DDELARLTALRAVMCLGQIAWTSTLAAARRLGWQVPRPAPRFGHGTRTQLVRPDGSIIVV 244 Query: 230 -ATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 H Q + T L L++L Sbjct: 245 LGCYHVS--RQNTNTGRLTRSMLDDAVNTLRDL 275 >gi|118577083|ref|YP_876826.1| uracil-DNA glycosylase [Cenarchaeum symbiosum A] gi|118195604|gb|ABK78522.1| uracil-DNA glycosylase [Cenarchaeum symbiosum A] Length = 227 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 63/224 (28%), Gaps = 46/224 (20%) Query: 74 ACSLHELKSLLRSFHDCHL----------CSTSLS--------TICATQTEGQDLMIIGY 115 A L L + C + ++++G Sbjct: 2 ASGLEALNRRIVRCKKCPRLSAYIRDVAEKKVRRHAGEKYWGRPLSGFGDPHARILVVGL 61 Query: 116 TPSDS-DNISGKPFSGK-TGNMLDKMLQ-------------SIEIMRTQIHISMISPWHP 160 P+ N +G+ F+G +G+ + + L ++ +I+ P Sbjct: 62 APAAHGGNRTGRMFTGDSSGDWVARALHENGLANKPTSTTIDDGLVLYDTYITAAVRCAP 121 Query: 161 PGNRNLSNIEMEICRPIIMRQIE-LISPKILLFIGNKT---KNFFFNNDAQKTYQNLGKW 216 P N E E C I + + L ++++ +G ++ Sbjct: 122 PQN-KPLKEEFENCFGYIEEEFKLLTDVRVVVCLGRIAFSCCCRLLGIRGEQFAHGR--- 177 Query: 217 SNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 H + + + HP Q + TW + + +N Sbjct: 178 ---VFAHGNLSIVCSYHPS--RQNTQTGRLTWPQWKRIFRLARN 216 >gi|254820131|ref|ZP_05225132.1| uracil-DNA glycosylase superfamily protein [Mycobacterium intracellulare ATCC 13950] Length = 278 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 32/248 (12%), Positives = 69/248 (27%), Gaps = 42/248 (16%) Query: 27 VFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRS 86 V D P + + + + ++A++A S+ EL +L+ Sbjct: 6 VLDHP--RTGQPFDSPVGAGTGWPGDPATPQTPVAADAARVVALAEQATSIPELDALVSV 63 Query: 87 FHDCHLCSTSL------------------STICATQTEGQDLMIIGYTPSDSD-NISGKP 127 C + + L+I+G P+ N +G+ Sbjct: 64 CRACPRLVDWREEVARVKRRAFADQPYWGRPVPSWGAARPRLLIVGLAPAAHGANRTGRM 123 Query: 128 FSG-KTGNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173 F+G ++G+ L L + + QI I P + E + Sbjct: 124 FTGDRSGDQLYAALYRAGLVNQPTSVDAADGLRTNQIRIVAPVRC-APPANAPTPAERDT 182 Query: 174 CRPIIMRQIE--LISPKILLFIGNKTKNFFFNNDAQK----TYQNLGKWSNLCTPHSIIP 227 C P + + + ++++ +G + + + Sbjct: 183 CWPWLQAEWQLVADHVRVVVALGGFGWQIALRLPGTSGRAAGPKPRFGHGAVADLAPGVR 242 Query: 228 TLATVHPQ 235 L HP Sbjct: 243 LLGCYHPS 250 >gi|116623923|ref|YP_826079.1| uracil-DNA glycosylase superfamily protein [Candidatus Solibacter usitatus Ellin6076] gi|116227085|gb|ABJ85794.1| Uracil-DNA glycosylase superfamily [Candidatus Solibacter usitatus Ellin6076] Length = 233 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 75/221 (33%), Gaps = 43/221 (19%) Query: 77 LHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLMIIGYTPS 118 L L+ + C + + ++I+G P Sbjct: 2 LELLQQEIIHCCRCPRLCAHTAEIAELKRRAYRDQTYWGRPVPSFGDPNARVLILGLAPG 61 Query: 119 DSD-NISGKPFSG-KTGNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGN 163 N +G+ F+G ++G++L ++L ++I+ + PPGN Sbjct: 62 AHGSNRTGRMFTGDRSGDILYRVLHHTGFASQPVAVSREDGLQLHDLYITAAAHCAPPGN 121 Query: 164 RNLSNIEMEICRPIIMRQIE-LISPKILLFIGNKTKNFFF------NNDAQKTYQNLGKW 216 + E+ CRP + R++E L + K+++ +G + + + + G Sbjct: 122 -KPTPQELRNCRPYLERELELLTNLKVVVALGKIAFDVYLDVLKSQGVISSRAPFLFGHD 180 Query: 217 SNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKA 257 T +A+ HP + Q K T L + + Sbjct: 181 LQYRTAPGHPILIASYHPSQ--QNTSTGKLTEKMLTDVFRR 219 >gi|167044093|gb|ABZ08777.1| putative Uracil DNA glycosylase superfamily protein [uncultured marine crenarchaeote HF4000_APKG5B22] Length = 226 Score = 72.9 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 65/218 (29%), Gaps = 40/218 (18%) Query: 77 LHELKSLLRSFHDCHLC------------------STSLSTICATQTEGQDLMIIGYTPS 118 L +L + C + L+IIG P+ Sbjct: 8 LEQLNKKIIKCRKCPRLSEYIRMVAKEKVSRFRHEKYWGRPLPGFGDVSAQLLIIGLAPA 67 Query: 119 DS-DNISGKPFSGK-TGNMLDKMLQSI-------------EIMRTQIHISMISPWHPPGN 163 N +G+ F+G +G+ L K L +++ PP N Sbjct: 68 AHGGNRTGRMFTGDSSGDWLAKALYENKFATKDTSNRLGDGFELKNSYVTAAIRCAPPKN 127 Query: 164 RNLSNIEMEICRPIIMRQIEL-ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP 222 + +E+E C P + ++++ + ++++ +G F + G + Sbjct: 128 -KPARMEIENCMPYLSEELKILKNIRVIICLGRIAFETFCKL-FSIKNKEFGHGRSFSFS 185 Query: 223 HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 I + + HP Q + W + + Sbjct: 186 GKTI--ICSYHPS--RQNTQTGRLGWDEWTDIFQKANQ 219 >gi|315928325|gb|EFV07640.1| DNA polymerase, bacteriophage-type [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 597 Score = 72.9 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 70/191 (36%), Gaps = 10/191 (5%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 ++ + ELK L+ S C T ++ + + L+I+ S+N SG + K Sbjct: 24 EQVQNFQELKQLVSSCTLCQFSKTRKFSLMEPKIKNAKLLILDVFGQKSENESGILLNSK 83 Query: 132 TGNMLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 G L + Q + + + S + G + + ++ C P +++LI P L Sbjct: 84 KGEKLKHYIYQILGLCDEDFYFSYLFKCFCNGKFDDFS--LQSCLPFFWNELKLIQPAFL 141 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 L +G T + + G+ + + + + P +KN Sbjct: 142 LCLGEYTFKSL---GFKDYHILKGEVFAY----KNFFIMPSYDLDFIEKNPSYEKNFIQD 194 Query: 251 LITLKKALKNL 261 L LK + + Sbjct: 195 LKKLKDFYEKI 205 >gi|153877406|ref|ZP_02004223.1| conserved hypothetical protein [Beggiatoa sp. PS] gi|152066130|gb|EDN65777.1| conserved hypothetical protein [Beggiatoa sp. PS] Length = 91 Score = 72.9 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 30/78 (38%), Positives = 45/78 (57%) Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170 M+IG P ++ G+PF G G +L+ ML++I+ R +++I+ + PPGNRN E Sbjct: 1 MLIGEAPGADEDAVGEPFVGPAGQLLNAMLRAIDFKREEVYIANMVKCRPPGNRNPKLEE 60 Query: 171 MEICRPIIMRQIELISPK 188 M C + QI LI PK Sbjct: 61 MVCCHGFLQHQISLIKPK 78 >gi|225077456|ref|ZP_03720655.1| hypothetical protein NEIFLAOT_02518 [Neisseria flavescens NRL30031/H210] gi|224951205|gb|EEG32414.1| hypothetical protein NEIFLAOT_02518 [Neisseria flavescens NRL30031/H210] Length = 253 Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 81/272 (29%), Gaps = 33/272 (12%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAI---------- 50 M S R L + L + + + + P A + + + Sbjct: 1 MLSSRYLHLHEALGLGPMWLNQNAKIIHAAPQAAAAPVCPKTIAADTAQAVRTLSAGVHQ 60 Query: 51 --QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQ 108 P V+ ++ + + ++ Sbjct: 61 ARTAAIAAAQTAKPAVRVPEAAPKAIAETPAKTEKAAHSDNLPRLDVTIRP--------S 112 Query: 109 DLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSN 168 ++M++ PS D++ G FSG G +LD +L SI + Q H + P Sbjct: 113 EIMVVSICPSTEDSLHGTLFSGDVGTLLDNILASIGLKPEQAHKTAWVKTAPVFTALPDA 172 Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT 228 + + ++ + +LF+G + +G + LC P Sbjct: 173 EHIRSELAEMQNELTASQARAVLFLGKI----------FDSPDMIGLMNELCAE---RPH 219 Query: 229 LATVHPQELIQYPLIKKNTWHALITLKKALKN 260 HP L+ P +K W L LK+ L Sbjct: 220 FVIPHPARLLMQPQLKAQAWQILKPLKQLLAK 251 >gi|153951968|ref|YP_001397945.1| hypothetical protein JJD26997_0818 [Campylobacter jejuni subsp. doylei 269.97] gi|152939414|gb|ABS44155.1| conserved hypothetical protein [Campylobacter jejuni subsp. doylei 269.97] Length = 192 Score = 72.5 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 69/188 (36%), Gaps = 10/188 (5%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 ++ + ELK L+ S C T ++ + + L+I+ S+N SG + K Sbjct: 14 EQTQNFQELKQLVSSCTLCQFSKTRKFSLMEPKIKNVKLLILDVFGQKSENESGILLNSK 73 Query: 132 TGNMLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 G L + Q + + + S + G + + ++ C P +++LI P L Sbjct: 74 KGEKLKHYIYQILGLCDEDFYFSYLFKCFCNGKFDDFS--LQSCLPFFWNELKLIQPAFL 131 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 L +G T + + G+ + + + + P +KN Sbjct: 132 LCLGEYTFKSL---GFKDYHILKGEVFAY----KNFFIMPSYDLDFIEKNPSYEKNFIQD 184 Query: 251 LITLKKAL 258 L +K L Sbjct: 185 LKKIKGFL 192 >gi|24216582|ref|NP_714063.1| uracil-DNA glycosylase [Leptospira interrogans serovar Lai str. 56601] gi|24197905|gb|AAN51081.1| uracil-DNA glycosylase [Leptospira interrogans serovar Lai str. 56601] Length = 205 Score = 72.5 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 62/164 (37%), Gaps = 11/164 (6%) Query: 82 SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 L S C + + + ++ +G P + G+PF+ G L + Sbjct: 13 ERLLSCRKCP--NMQGNPVHGC-VPVSKIISLGQAPGIHEERFGRPFAYTAGKTLFGWFK 69 Query: 142 SIEIM----RTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 I I R+++++S + P G+R +IE++ C + ++ P++L+ I Sbjct: 70 KIGIEEENFRSKVNMSAVCRCFPGKAKSGDRKPDSIEVKNCSQFLEFEVRFHKPELLIPI 129 Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237 G + F K +G+ + + + HP L Sbjct: 130 GKLAIDQVFELGKYKLEDVIGRSFSREFYGVQLDWIPLPHPSGL 173 >gi|45658925|ref|YP_003011.1| uracil DNA glycosylase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45602170|gb|AAS71648.1| uracil DNA glycosylase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 205 Score = 72.1 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 62/164 (37%), Gaps = 11/164 (6%) Query: 82 SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 L S C + + + ++ +G P + G+PF+ G L + Sbjct: 13 ERLLSCRKCP--NMQGNPVHGC-VPVSKIISLGQAPGIHEERFGRPFAYTAGKTLFGWFK 69 Query: 142 SIEIM----RTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 I I R+++++S + P G+R +IE++ C + ++ P++L+ I Sbjct: 70 KIGIEEENFRSKVNMSAVCRCFPGKAKSGDRKPDSIEVKNCSQFLEFEVRFHKPELLIPI 129 Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237 G + F K +G+ + + + HP L Sbjct: 130 GKLAIDQVFELGKYKLEDVIGRSFSRKFYGVQLDWIPLPHPSGL 173 >gi|257388679|ref|YP_003178452.1| uracil-DNA glycosylase superfamily [Halomicrobium mukohataei DSM 12286] gi|257170986|gb|ACV48745.1| Uracil-DNA glycosylase superfamily [Halomicrobium mukohataei DSM 12286] Length = 208 Score = 72.1 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 65/162 (40%), Gaps = 13/162 (8%) Query: 85 RSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143 + +C LC T + + G +L+++G +PS++ + G PF G+ L +L+ + Sbjct: 16 ETCQNCPELCETRQNVVHGYGDVGAELLVLGESPSETADAVGLPFVGERERELLDILERV 75 Query: 144 EI---------MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 + ++++ +S H P + E+ C P + ++ +I+P++LL +G Sbjct: 76 GLVDDPDADRPQFDNVYLTYVSRCHHPERGAT-DEEVRNCEPYLNSEVRMINPELLLPVG 134 Query: 195 NKTKNFFFNNDAQKTYQNLG--KWSNLCTPHSIIPTLATVHP 234 + + L + L + P Sbjct: 135 QAALDALAFEYTTLSEDELAVEERHATTIRGRGFELLPMIEP 176 >gi|167725307|ref|ZP_02408543.1| putative DNA glycosylase [Burkholderia pseudomallei DM98] Length = 152 Score = 72.1 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 55/132 (41%), Gaps = 13/132 (9%) Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIM 179 PF G G +L++ L + + R ++++ ++ + E++ CR + Sbjct: 3 PFVGPAGRVLERALAAAGLDRASVYVTNAVKHFKWAPRGKRRMHKTPAQQEIDACRYWLE 62 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 R+++ + P++++ +G ++ + +G + +AT HP +++ Sbjct: 63 RELDALGPRVVVALGAIALKAVLDDRHARLQPAMG----VVQSAGGRYVIATYHPSFVLR 118 Query: 240 --YPLIKKNTWH 249 P +K + Sbjct: 119 VPDPDARKRAYA 130 >gi|116329070|ref|YP_798790.1| Uracil-DNA glycosylase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330320|ref|YP_800038.1| Uracil-DNA glycosylase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116121814|gb|ABJ79857.1| Uracil-DNA glycosylase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116124009|gb|ABJ75280.1| Uracil-DNA glycosylase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 205 Score = 72.1 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 59/162 (36%), Gaps = 11/162 (6%) Query: 84 LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143 L S C + I ++ +G P + GKPF+ G L + I Sbjct: 15 LLSCRKCP--KMQGNPIHGC-IPSSRIISLGQAPGIHEERFGKPFAYTAGKTLFGWFKKI 71 Query: 144 EIM----RTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 I R+++++S + P G+R E++ C + ++ P++L+ IG Sbjct: 72 GIEEETFRSKVNMSAVCRCFPGKAKSGDRKPDLEEVKNCSEFLEFEVRFHKPELLIPIGK 131 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237 + F K +GK + + + HP L Sbjct: 132 LAIDQLFEFGKYKLEDVIGKTFSREFYGVRLDWIPLPHPSGL 173 >gi|205356685|ref|ZP_03223446.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni CG8421] gi|205345423|gb|EDZ32065.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 597 Score = 72.1 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 70/191 (36%), Gaps = 10/191 (5%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 ++ + ELK L+ S C T ++ + + L+I+ S+N SG + K Sbjct: 24 EQVQNFQELKQLVSSCTLCQFSKTRKFSLMEPKIKNAKLLILDVFGQKSENESGILLNSK 83 Query: 132 TGNMLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 G L + Q + + + S + G + + ++ C P +++LI P L Sbjct: 84 KGEKLKHYIYQILGLCDEDFYFSYLFKCFCNGKFDDFS--LQSCLPFFWNELKLIQPAFL 141 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 L +G T + + G+ + + + + P +KN Sbjct: 142 LCLGEYTFKSL---GFKDYHILKGEVFAY----KNFFIMPSYDLDFIEKNPSYEKNFIQD 194 Query: 251 LITLKKALKNL 261 L +K + + Sbjct: 195 LKKIKGFYEKI 205 >gi|86150656|ref|ZP_01068877.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|88596675|ref|ZP_01099912.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 84-25] gi|218562582|ref|YP_002344361.1| hypothetical protein Cj0963 [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85838837|gb|EAQ56105.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|88191516|gb|EAQ95488.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 84-25] gi|112360288|emb|CAL35083.1| hypothetical protein Cj0963 [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926196|gb|ADC28548.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni IA3902] Length = 202 Score = 72.1 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 69/188 (36%), Gaps = 10/188 (5%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 ++ + ELK L+ S C T ++ + + L+I+ S+N SG + K Sbjct: 24 EQVQNFQELKQLVSSCTLCQFSKTRKFSLMEPKIKNAKLLILDVFGQKSENESGILLNSK 83 Query: 132 TGNMLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 G L + Q + + + S + G + + ++ C P +++LI P L Sbjct: 84 KGEKLKHYIYQILGLCDEDFYFSYLFKCFCNGKFDDFS--LQSCLPFFWNELKLIQPAFL 141 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 L +G T + + G+ + + + + P +KN Sbjct: 142 LCLGEYTFKSL---GFKDYHILKGEVFAY----KNFFIMPSYDLDFIEKNPSYEKNFIQD 194 Query: 251 LITLKKAL 258 L +K L Sbjct: 195 LKKIKGFL 202 >gi|157415225|ref|YP_001482481.1| hypothetical protein C8J_0905 [Campylobacter jejuni subsp. jejuni 81116] gi|157386189|gb|ABV52504.1| DNA polymerase, bacteriophage-type [Campylobacter jejuni subsp. jejuni 81116] gi|307747867|gb|ADN91137.1| phage SPO1 DNA polymerase-related protein [Campylobacter jejuni subsp. jejuni M1] gi|315932550|gb|EFV11483.1| DNA polymerase, bacteriophage-type [Campylobacter jejuni subsp. jejuni 327] Length = 202 Score = 72.1 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 69/188 (36%), Gaps = 10/188 (5%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 ++ + ELK L+ S C T ++ + + L+I+ S+N SG + K Sbjct: 24 EQVQNFQELKQLVSSCTLCQFSKTRKFSLMEPKIKNVKLLILDVFGQKSENESGILLNSK 83 Query: 132 TGNMLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 G L + Q + + + S + G + + ++ C P +++LI P L Sbjct: 84 KGEKLKHYIYQILGLCDEDFYFSYLFKCFCNGKFDDFS--LQSCLPFFWNELKLIQPAFL 141 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 L +G T + + G+ + + + + P +KN Sbjct: 142 LCLGEYTFKSL---GFKDYHILKGEIFAY----KNFFIMPSYDLDFIEKNPSYEKNFIQD 194 Query: 251 LITLKKAL 258 L +K L Sbjct: 195 LKKIKGFL 202 >gi|57237791|ref|YP_179039.1| hypothetical protein CJE1043 [Campylobacter jejuni RM1221] gi|57166595|gb|AAW35374.1| conserved hypothetical protein [Campylobacter jejuni RM1221] gi|315058404|gb|ADT72733.1| DNA polymerase, bacteriophage-type [Campylobacter jejuni subsp. jejuni S3] Length = 202 Score = 72.1 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 69/188 (36%), Gaps = 10/188 (5%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 ++ + ELK L+ S C T ++ + + L+I+ S+N SG + K Sbjct: 24 EQVQNFQELKQLVSSCTLCQFSKTRKFSLMEPKIKNVKLLILDVFGQKSENESGILLNSK 83 Query: 132 TGNMLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 G L + Q + + + S + G + + ++ C P +++LI P L Sbjct: 84 KGEKLKHYIYQILGLCDEDFYFSYLFKCFCNGKFDDFS--LQSCLPFFWNELKLIQPAFL 141 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 L +G T + + G+ + + + + P +KN Sbjct: 142 LCLGEYTFKSL---GFKDYHILKGEVFAY----KNFFIMPSYDLDFIEKNPSYEKNFIQD 194 Query: 251 LITLKKAL 258 L +K L Sbjct: 195 LKKIKGFL 202 >gi|51893117|ref|YP_075808.1| uracil-DNA glycosylase [Symbiobacterium thermophilum IAM 14863] gi|51856806|dbj|BAD40964.1| uracil-DNA glycosylase [Symbiobacterium thermophilum IAM 14863] Length = 253 Score = 71.7 bits (174), Expect = 9e-11, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 66/226 (29%), Gaps = 43/226 (19%) Query: 48 SAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCST------------ 95 SA P + ++ L L + C T Sbjct: 4 SAPHPGPAAPGCADHPPHL---VPERTRCLEGLHRDIIECDRCPRLRTYCAEVGQTRVRR 60 Query: 96 ------SLSTICATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKML------- 140 + L I+G P N +G+ F+G G L L Sbjct: 61 YRDQEYWARPVPGFGDPEARLFILGLAPGAHGANRTGRMFTGDDSGRWLYGALYEFGFAD 120 Query: 141 ------QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIEL-ISPKILLFI 193 + + T +IS + PPGN S E+ CRP + ++ + +++L + Sbjct: 121 RPESVSRDDGLTLTDAYISNVVRCAPPGN-KPSPGEIAACRPFLEAELAMLTRVRVVLAL 179 Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA----TVHPQ 235 G + + + + G+ IP L + HP Sbjct: 180 GRIAFDTYVRLRRAQGFDP-GRIDFRHGAEYRIPGLPVLLSSYHPS 224 >gi|315928507|gb|EFV07811.1| DNA polymerase, bacteriophage-type [Campylobacter jejuni subsp. jejuni 305] Length = 216 Score = 71.7 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 69/190 (36%), Gaps = 10/190 (5%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 ++ + ELK L+ S C T ++ + + L+I+ S+N SG + K Sbjct: 24 EQVQNFQELKQLVSSCTLCQFSKTRKFSLMEPKIKNAKLLILDVFGQKSENESGILLNSK 83 Query: 132 TGNMLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 G L + Q + + + S + G + + ++ C P +++LI P L Sbjct: 84 KGEKLKHYIYQILGLCDEDFYFSYLFKCFCNGKFDDFS--LQSCLPFFWNELKLIQPAFL 141 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 L +G T + + G+ + + + + P +KN Sbjct: 142 LCLGEYTFKSL---GFKDYHILKGEVFAY----KNFFIMPSYDLDFIEKNPSYEKNFIQD 194 Query: 251 LITLKKALKN 260 L LK + Sbjct: 195 LKKLKDFYEK 204 >gi|292654411|ref|YP_003534308.1| uracil DNA glycosylase [Haloferax volcanii DS2] gi|291371708|gb|ADE03935.1| uracil DNA glycosylase [Haloferax volcanii DS2] Length = 211 Score = 71.7 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 63/194 (32%), Gaps = 27/194 (13%) Query: 86 SFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSD----SDNISGKPFSGK------TGN 134 C L + +M++G P ++ G ++G +G Sbjct: 20 DCARCPALVDCRNRISWGVGPDDATVMVVGEAPGAGNPDAERWRGGNWTGMSYTARHSGR 79 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPG----NRNLSNIEMEICRPIIMRQIELISPKIL 190 + + + ++ + + + P NR + E CR ++ ++E + P ++ Sbjct: 80 RIRETMAAVGY-ESGVFYTNAVKCFPSDGEGSNRAPTAAEKANCRDHLVSELEAVDPDVV 138 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSN-LCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249 + G D L + + + + +HP ++ W Sbjct: 139 VPTGRHATESVLALDDASLDGFLDTVLDPVESERFGYTVVPLLHPSY--------RDVWL 190 Query: 250 ALI--TLKKALKNL 261 + + L++ L +L Sbjct: 191 SRLGYELEEYLADL 204 >gi|148926116|ref|ZP_01809802.1| hypothetical protein Cj8486_1120c [Campylobacter jejuni subsp. jejuni CG8486] gi|145845595|gb|EDK22687.1| hypothetical protein Cj8486_1120c [Campylobacter jejuni subsp. jejuni CG8486] Length = 202 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 69/188 (36%), Gaps = 10/188 (5%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 ++ + ELK L+ S C T ++ + + L+I+ S+N SG + K Sbjct: 24 EQVQNFQELKQLVSSCTLCQFSKTRKFSLMEPKIKNVKLLILDVFGQKSENESGILLNSK 83 Query: 132 TGNMLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 G L + Q + + + S + G + + ++ C P +++LI P L Sbjct: 84 KGEKLKHYIYQILGLCDEDFYFSYLFKCFCNGKFDDFS--LQSCLPFFWNELKLIQPAFL 141 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 L +G T + + G+ + + + + P +KN Sbjct: 142 LCLGEYTFKNL---GFKDYHILKGEVFAY----KNFFIMPSYDLDFIEKNPSYEKNFIQD 194 Query: 251 LITLKKAL 258 L +K L Sbjct: 195 LKKIKGFL 202 >gi|121612802|ref|YP_001000645.1| hypothetical protein CJJ81176_0986 [Campylobacter jejuni subsp. jejuni 81-176] gi|121504202|gb|EAQ71865.2| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 81-176] Length = 192 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 70/188 (37%), Gaps = 10/188 (5%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 ++ + ELK L+ S C T ++ + + L+I+ S+N SG + K Sbjct: 14 EQVQNFQELKQLVSSCTLCQFSKTRKFSLMEPKIKNAKLLILDVFGQKSENESGILLNSK 73 Query: 132 TGNMLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 G L + + Q + + + S + G + + ++ C P +++LI P L Sbjct: 74 KGEKLKRYIYQILGLCDEDFYFSYLFKCFCNGKFDDFS--LQSCLPFFWNELKLIQPAFL 131 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 L +G T + + G+ + + + + P +KN Sbjct: 132 LCLGEYTFKSL---GFKDYHILKGEVFAY----KNFFIMPSYDLDFIEKNPSYEKNFIQD 184 Query: 251 LITLKKAL 258 L +K L Sbjct: 185 LKKIKGFL 192 >gi|86150841|ref|ZP_01069057.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 260.94] gi|86152879|ref|ZP_01071084.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|85842011|gb|EAQ59257.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 260.94] gi|85843764|gb|EAQ60974.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni HB93-13] Length = 202 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 70/188 (37%), Gaps = 10/188 (5%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 ++ + ELK L+ S C T ++ + + L+I+ S+N SG + K Sbjct: 24 EQVQNFQELKQLVSSCTLCQFSKTRKFSLMEPKIKNAKLLILDVFGQKSENESGILLNSK 83 Query: 132 TGNMLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 G L + + Q + + + S + G + + ++ C P +++LI P L Sbjct: 84 KGEKLKRYIYQILGLCDEDFYFSYLFKCFCNGKFDDFS--LQSCLPFFWNELKLIQPAFL 141 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 L +G T + + G+ + + + + P +KN Sbjct: 142 LCLGEYTFKSL---GFKDYHILKGEVFAY----KNFFIMPSYDLDFIEKNPSYEKNFIQD 194 Query: 251 LITLKKAL 258 L +K L Sbjct: 195 LKKIKGFL 202 >gi|197124079|ref|YP_002136030.1| uracil-DNA glycosylase superfamily protein [Anaeromyxobacter sp. K] gi|196173928|gb|ACG74901.1| Uracil-DNA glycosylase superfamily protein [Anaeromyxobacter sp. K] Length = 226 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 30/200 (15%), Positives = 61/200 (30%), Gaps = 39/200 (19%) Query: 74 ACSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLMIIGY 115 A +L + + + C I + ++G Sbjct: 2 ADTLSAVAAEVVRCRACPRLVAWREQVARAKRRAYRDEVYWGRPIPGFGDARARIALVGL 61 Query: 116 TPSDSD-NISGKPFSG-KTGNMLDKMLQ-------------SIEIMRTQIHISMISPWHP 160 P N +G+ F+G ++G+ L L + I+ P Sbjct: 62 APGAHGSNRTGRMFTGDRSGDFLYAALHRAGLASQPTSRARDDGLALDGAWITSACRCAP 121 Query: 161 PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK---TKNFFFNNDAQKTYQNLGKW- 216 P N S E+ C P + R++ L+ P++L+ +G+ ++ + ++ Sbjct: 122 PDN-RPSPDELARCAPFLDRELALLRPRVLVALGSVGWDAILAALRRAGREVPRPRPRFG 180 Query: 217 SNLCTPHSIIP-TLATVHPQ 235 +P L HP Sbjct: 181 HGAELRLPGLPAVLGCYHPS 200 >gi|309780720|ref|ZP_07675461.1| uracil DNA glycosylase superfamily protein [Ralstonia sp. 5_7_47FAA] gi|308920402|gb|EFP66058.1| uracil DNA glycosylase superfamily protein [Ralstonia sp. 5_7_47FAA] Length = 373 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 60/170 (35%), Gaps = 9/170 (5%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTI-CATQTEGQDLMIIGYTPSD-SDNISGKPFS 129 K +L + + C + S + LM +G P + S PF Sbjct: 5 DKEAKFLDLVHRVTACQKCPRMAGSARVLGPGCGPLDAPLMFVGEAPGRLGADGSHLPFH 64 Query: 130 GKT-GNMLDKMLQSIEIMRTQIHISMISPWHPP----GNRNLSNIEMEICRPIIMRQIEL 184 G G+ +K+++ + I R ++ ++ +P N ++ E+ C P + +E+ Sbjct: 65 GDKSGHNFEKLIEQVGISRYEVFVTNAVLCNPKDERGNNATPTSTEIANCAPFLRETVEI 124 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHP 234 + P I++ +G ++ + P + HP Sbjct: 125 LDPSIVVTLGAVALKA-CGELEAHSFSLRDQVRT-NNPWMHRSLIPVYHP 172 >gi|220918858|ref|YP_002494162.1| uracil-DNA glycosylase superfamily [Anaeromyxobacter dehalogenans 2CP-1] gi|219956712|gb|ACL67096.1| Uracil-DNA glycosylase superfamily [Anaeromyxobacter dehalogenans 2CP-1] Length = 226 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 29/200 (14%), Positives = 62/200 (31%), Gaps = 39/200 (19%) Query: 74 ACSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLMIIGY 115 A +L + + + C I + ++G Sbjct: 2 ADTLSAVAAEVVRCRACPRLVAWREQVAREKRRAYRDEVYWGRPIPGFGDARARIALVGL 61 Query: 116 TPSDSD-NISGKPFSG-KTGNMLDKMLQ-------------SIEIMRTQIHISMISPWHP 160 P N +G+ F+G ++G+ L L + I+ P Sbjct: 62 APGAHGSNRTGRMFTGDRSGDFLYAALHRAGLATQPTSRARDDGLALDGAWITSACRCAP 121 Query: 161 PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK---TKNFFFNNDAQKTYQNLGKW- 216 P N + E+ C P + R++ L+ P++L+ +G+ ++ + ++ Sbjct: 122 PDN-RPTPDELARCAPFLDRELALLRPRVLVALGSVGWDAILAALRRAGREVPRPRPRFG 180 Query: 217 SNLCTPHSIIP-TLATVHPQ 235 + +P L HP Sbjct: 181 HGAELRLAGLPAVLGCYHPS 200 >gi|218461579|ref|ZP_03501670.1| probable DNA-directed DNA polymerase protein [Rhizobium etli Kim 5] Length = 143 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 48/120 (40%), Gaps = 11/120 (9%) Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIM 179 PF G G++LD+ L+ + R + +++ + + E+ C + Sbjct: 1 PFVGPAGHLLDRCLEEAGLNRERCYVTNAVKHFKFTPRGKRRLHAKPNAGEIRRCAWWLG 60 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 ++ ++ PK+++ +G A+ G P + P L T+HP L++ Sbjct: 61 AELNILQPKLVVALGASALYALLGPKAKL-TPERGHILQ---PRNHPPVLVTIHPSFLLR 116 >gi|150396807|ref|YP_001327274.1| uracil-DNA glycosylase superfamily protein [Sinorhizobium medicae WSM419] gi|150028322|gb|ABR60439.1| Uracil-DNA glycosylase superfamily [Sinorhizobium medicae WSM419] Length = 217 Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 68/213 (31%), Gaps = 21/213 (9%) Query: 68 DSIAQKACSLHELKSLLRSFHDCHLCSTS--LSTICATQTE------GQDLMIIGYTPSD 119 A L L+ + C + ++I G P Sbjct: 5 RGSAVTEEHLQALREAISLCRRCRDDPARGMDHRLPHEPRPVAVLSSSARILIAGQAPGL 64 Query: 120 SDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHP--PGNRNLSNIEMEIC 174 + SG PF+ +G+ L + L ++ I + P G+ + E Sbjct: 65 RVHESGLPFNDASGDRLRQWLSVDRTAFYDPGNFAIVPMGFCFPGYDGHGSDLPPRSECA 124 Query: 175 RPIIMRQIE-LISPKILLFIGNKTKNFFFNN-DAQKTYQNLGKWSNLCTPHSIIPTLATV 232 R I+ + +++L +G+ + + + + + W +S P L Sbjct: 125 SLWRRRAIDAMPQIELVLAVGHYAQRWHLGQGCPKSMTETVRNWRRYAKSNSGTPVLPLP 184 Query: 233 HPQELIQYPLI-KKNTW---HALITLKKALKNL 261 HP + ++N W L L++ +K L Sbjct: 185 HPSW--RNTGWLRRNLWFETELLPFLREQVKAL 215 >gi|332675639|gb|AEE72455.1| uracil-DNA glycosylase [Propionibacterium acnes 266] Length = 278 Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 29/245 (11%), Positives = 59/245 (24%), Gaps = 42/245 (17%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P+ + + + + A IA +L + + F C Sbjct: 5 PHPRIATLFESPVAPGSGWPGDPASPDTPVAKCAEDAARIAAHCSEFEDLDATISVFRAC 64 Query: 91 HLCSTSL------------------STICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131 + + ++IIG P+ N +G+ F+G Sbjct: 65 PRLVKWREDIAVTKRAQWRDEPYWGRPVPSFGDPSARMVIIGLAPAAHGANRTGRMFTGD 124 Query: 132 -TGNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177 +G+ L + L + + I PP N + + Sbjct: 125 QSGDWLYRALYDANIASQAQSIDAADGLTLHDCRIIAPVHCAPPDNWPRPDEKRTCAIWF 184 Query: 178 IMRQIELISPKILLFIGNKTKNFFF--------NNDAQKTYQNLGKWSNLCTPHSIIPTL 229 L + + ++ +G G + L P I + Sbjct: 185 DDELARLTALRAVMCLGQIAWTSTLAAARRLGWQVPRPAPRFGHGTRTQLVRPDGSIIVV 244 Query: 230 -ATVH 233 H Sbjct: 245 LGCYH 249 >gi|298242040|ref|ZP_06965847.1| Uracil-DNA glycosylase superfamily [Ktedonobacter racemifer DSM 44963] gi|297555094|gb|EFH88958.1| Uracil-DNA glycosylase superfamily [Ktedonobacter racemifer DSM 44963] Length = 210 Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 62/173 (35%), Gaps = 19/173 (10%) Query: 75 CSLHELKSLLRSFHDCHLCST--SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 L L++ +++ C I + + +IG P + KP+SG Sbjct: 14 EDLQVLQTQIKACRRCQEAGYIPCAQPIVS-GRIADQVFVIGQAPGHRSVANNKPWSGPA 72 Query: 133 GNMLDKMLQ----SIEIMRTQIHISMISPW------HPPGNRNLSNIEMEICRPIIMRQI 182 G +L + L+ + ++S ++ G+R S E E+CRP + ++ Sbjct: 73 GLLLQRWLEQAGFPAGYLYEHAYLSSLTHCDPGKNPRGNGDRKPSRQETELCRPFLDAEL 132 Query: 183 ELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 L+ P+++L +G FF + T L HP Sbjct: 133 RLVQPRVVLLVGTMAIETFFGKTRLED------LIGTYTERDGTLFLPLPHPS 179 >gi|289428569|ref|ZP_06430253.1| uracil-DNA glycosylase, family 4 [Propionibacterium acnes J165] gi|295130795|ref|YP_003581458.1| uracil-DNA glycosylase, family 4 [Propionibacterium acnes SK137] gi|289158263|gb|EFD06482.1| uracil-DNA glycosylase, family 4 [Propionibacterium acnes J165] gi|291375413|gb|ADD99267.1| uracil-DNA glycosylase, family 4 [Propionibacterium acnes SK137] Length = 278 Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 29/245 (11%), Positives = 59/245 (24%), Gaps = 42/245 (17%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P+ + + + + A IA +L + + F C Sbjct: 5 PHPRIATLFESPVAPGSGWPGDPASPDTPVAKCAEDAARIAAHCSEFEDLDATISVFRAC 64 Query: 91 HLCSTSL------------------STICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131 + + ++IIG P+ N +G+ F+G Sbjct: 65 PRLVKWREDIAVTKRAQWRDEPYWGRPVPSFGDPSARMVIIGLAPAAHGANRTGRMFTGD 124 Query: 132 -TGNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177 +G+ L + L + + I PP N + + Sbjct: 125 QSGDWLYRALYDADIASQAQSIDAADGLTLHDCRIIAPVHCAPPDNWPRPDEKRTCAIWF 184 Query: 178 IMRQIELISPKILLFIGNKTKNFFF--------NNDAQKTYQNLGKWSNLCTPHSIIPTL 229 L + + ++ +G G + L P I + Sbjct: 185 DDELARLTALRAVMCLGQIAWTSTLAAARRLGWQVPRPAPRFGHGTRTQLVRPDGSIIVV 244 Query: 230 -ATVH 233 H Sbjct: 245 LGCYH 249 >gi|134097455|ref|YP_001103116.1| uracil-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] gi|291004553|ref|ZP_06562526.1| uracil-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] gi|133910078|emb|CAM00190.1| uracil-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] Length = 256 Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 75/254 (29%), Gaps = 48/254 (18%) Query: 53 ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL--------------- 97 I + V+ + A A L EL + C Sbjct: 2 IPGPSRLIDDPVEDPSAAAGGAADLGELDEAITRCTACPRLVAWREEVAMVKRAAFRDQP 61 Query: 98 ---STICATQTEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKMLQ----------- 141 + L I+G P+ N +G+ F+G ++G++L + + Sbjct: 62 YWGRPVPGFGPADAALGIVGLAPAAHGANRTGRMFTGDRSGDVLYRAMYDVGLASQPEAH 121 Query: 142 --SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKT 197 ++ I PP + E + C P + R++EL+ P + ++ +G Sbjct: 122 GLDDGLVLRGARIVSPVRCAPP-ANKPTPGERDTCAPWLARELELLRPTLRAVVVLGAFG 180 Query: 198 KNFFFN--------NDAQKTYQNLGKWSNLCTPHSIIP--TLATVHPQELIQYPLIKKNT 247 + + G + L P L H + + K T Sbjct: 181 WQALLPILGAAAWRIPSPRPKFGHGAHAELPAADGGPPLHLLGCYHVSQ--RNTQTGKLT 238 Query: 248 WHALITLKKALKNL 261 L + + K+L Sbjct: 239 PEMLRAVLEQAKDL 252 >gi|325523778|gb|EGD02026.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp. TJI49] Length = 74 Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 18/63 (28%), Gaps = 5/63 (7%) Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253 G DA G+ +P + T HP L++ K W L Sbjct: 1 GRFAAQTLLKTDASIAS-LRGRVHAYE----GVPVIVTYHPAYLLRSLQDKSKAWADLCL 55 Query: 254 LKK 256 + Sbjct: 56 ARD 58 >gi|159041387|ref|YP_001540639.1| uracil-DNA glycosylase superfamily protein [Caldivirga maquilingensis IC-167] gi|157920222|gb|ABW01649.1| Uracil-DNA glycosylase superfamily [Caldivirga maquilingensis IC-167] Length = 231 Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 25/207 (12%), Positives = 60/207 (28%), Gaps = 39/207 (18%) Query: 80 LKSLLRSFHDCHLC----------------STSLSTICATQTE-GQDLMIIGYTPSDSD- 121 L++L+ + + C + +MI+G P+ Sbjct: 11 LRNLI-NCNYCERLVRYRVTVPPLPRFSNDEYWRKPVPPWGDLSNPRIMIVGLAPAAHGG 69 Query: 122 NISGKPFSGKTG-NMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLS 167 N +G+ F+G L K L + + +I+ + PP N+ Sbjct: 70 NRTGRMFTGDASAQFLFKALHACGLSNNPYSLSRIDGTKVNCVYITSVVKCAPPDNKPTP 129 Query: 168 NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227 + +I ++ P+ ++ +G + G + + + Sbjct: 130 GEVKACVGRWFINEINMVKPRAIVVLGEVAWRGVAMALGLRGGFKHGGV--VKINDTAVY 187 Query: 228 TLATVHPQELIQYPLIKKNTWHALITL 254 + HP + + L+ + Sbjct: 188 M--SYHPSP--RNTNTGRLRLSDLVNI 210 >gi|171185625|ref|YP_001794544.1| uracil-DNA glycosylase superfamily protein [Thermoproteus neutrophilus V24Sta] gi|170934837|gb|ACB40098.1| Uracil-DNA glycosylase superfamily [Thermoproteus neutrophilus V24Sta] Length = 206 Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 30/202 (14%), Positives = 68/202 (33%), Gaps = 33/202 (16%) Query: 84 LRSFHDC-HLCSTSL--------STICATQTEGQDLMIIGYTPSDSD-NISGKPFSG-KT 132 L + C L + + +M++G P+ N +G+ F+G ++ Sbjct: 10 LTACRACSRLVEYRSSFPPGYWAKPVPPWGS--GPIMVVGLAPAARGGNRTGRMFTGDRS 67 Query: 133 GNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIM 179 L + L + + ++I+ PPGN + E++ C + Sbjct: 68 SQNLFRALYEAGLASRPYSISRDDGVELHGVYITSAVKCAPPGN-KPTAEEVKNCSRWLR 126 Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 ++E++ P++++ +G + G + + + HP + Sbjct: 127 EEVEIVKPRVVVALGRVAWRALSEILGVREEFRHG----AVVEKNGVYLVGAYHPSP--R 180 Query: 240 YPLIKKNTWHALITLKKALKNL 261 + T L + K K L Sbjct: 181 NINTGRTTVEELAEVFKLAKRL 202 >gi|326384729|ref|ZP_08206406.1| hypothetical protein SCNU_17395 [Gordonia neofelifaecis NRRL B-59395] gi|326196537|gb|EGD53734.1| hypothetical protein SCNU_17395 [Gordonia neofelifaecis NRRL B-59395] Length = 246 Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 55/177 (31%), Gaps = 36/177 (20%) Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL------------------STICA 102 S + A A + SL L L+ C + Sbjct: 2 SRRAESAPDRAARIRSLTALDDLVADCRACPRLVAWREEVAATKRAAFRDQTYWGRAVPG 61 Query: 103 TQTEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKMLQS-------------IEIMR 147 ++I+G P+ N +G+ F+G ++G+ L L + + Sbjct: 62 FGPGDARILIVGLAPAAHGANRTGRMFTGDRSGDFLFAALHAVGLASQSVAVSADDGLEL 121 Query: 148 TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFF 202 I+ PP + E C P + R++EL++P + + +G Sbjct: 122 FGTRITSPVHCAPP-ANKPTPEERRRCAPFLGRELELLAPSLRAAVVLGGFGWQALL 177 >gi|163744058|ref|ZP_02151425.1| uracil-DNA glycosylase, putative [Phaeobacter gallaeciensis 2.10] gi|161382674|gb|EDQ07076.1| uracil-DNA glycosylase, putative [Phaeobacter gallaeciensis 2.10] Length = 197 Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 27/202 (13%), Positives = 67/202 (33%), Gaps = 25/202 (12%) Query: 76 SLHELKSLLRSFHDCHLCSTSL------STICATQTEGQDLMIIGYTPSDSDNISGKPFS 129 + +L+ +R+ C + + ++I G P + SG+PF+ Sbjct: 3 TTEDLRQEIRACRLCAGRFAATVTRHSPRPVVWF-DSAARILIAGQAPGARVHDSGRPFT 61 Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186 +G+ L + L ++ ++ + I ++ P + +++ + + Sbjct: 62 DPSGDRLREWLGLSEAQFYDQSLVAIVPMAFCFPGYSAKKADLPPPAICRTTWHDRVMDT 121 Query: 187 PKIL---LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI 243 + + +G ++ Q G W + HP + Sbjct: 122 LPNIGLRVLVGGYAHSYHLGGKQSVQAQVEG-WRDHAPQE-----FPLPHPSW--RNTAW 173 Query: 244 -KKNTW--HALI-TLKKALKNL 261 K+N W L+ L+ ++ L Sbjct: 174 LKRNPWFETDLLPVLRARVQEL 195 >gi|253681175|ref|ZP_04861976.1| uracil DNA glycosylase superfamily protein [Clostridium botulinum D str. 1873] gi|253562611|gb|EES92059.1| uracil DNA glycosylase superfamily protein [Clostridium botulinum D str. 1873] Length = 141 Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 54/145 (37%), Gaps = 18/145 (12%) Query: 131 KTGNMLDKMLQSIEIMRTQIHISMISPWHPPG------------NRNLSNIEMEICRPII 178 G + L+SI + R+++ I+ + P NR E+ + R ++ Sbjct: 1 MAGETFNNYLKSIGLSRSEVRITNTCFFRPIKKKVGKTGRTTISNRPPKVSEVNLFREVL 60 Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238 +I ++PKI++ +GN + + G + I HP L Sbjct: 61 DDEINFVNPKIIITLGNVPLKRL--TEFKSIGDCHGNL--YYNENLKINIFPMYHPSALT 116 Query: 239 --QYPLIKKNTWHALITLKKALKNL 261 + KK + + LK+ LK + Sbjct: 117 YNRNDEFKKMYENDWLKLKEVLKTI 141 >gi|257467426|ref|ZP_05631737.1| DNA polymerase [Fusobacterium gonidiaformans ATCC 25563] gi|315918550|ref|ZP_07914790.1| DNA polymerase [Fusobacterium gonidiaformans ATCC 25563] gi|313692425|gb|EFS29260.1| DNA polymerase [Fusobacterium gonidiaformans ATCC 25563] Length = 191 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 68/186 (36%), Gaps = 12/186 (6%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 ELK S + L L + D++I+G P N + K G +G L Sbjct: 8 WEELKYGAASIGNTILKPHQLEVLIGGGNPDSDILILGDDPELYLNENLKTKEGSSGEFL 67 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 +L+ I + I++S +S ++ + E + +++ QI L+SPK+++ +G + Sbjct: 68 YLLLEFCGIQKEDIYVSTLSK-RNARLKDFMPEDYEKLKELLICQIGLLSPKVIVCLGYE 126 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL--IQYPLIKK-----NTWH 249 ++ + I T + + L KK + Sbjct: 127 AAQMLL-EKEINLEKDRQEVFTWKA---GIQVFVTYDVNTVKKARAELGKKAKLALEFRN 182 Query: 250 ALITLK 255 L L+ Sbjct: 183 DLKKLQ 188 >gi|254453441|ref|ZP_05066878.1| uracil-DNA glycosylase superfamily [Octadecabacter antarcticus 238] gi|198267847|gb|EDY92117.1| uracil-DNA glycosylase superfamily [Octadecabacter antarcticus 238] Length = 199 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 32/199 (16%), Positives = 64/199 (32%), Gaps = 27/199 (13%) Query: 80 LKSLLRSFHDCHLCSTSLSTICA-----TQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L+ + + C + T + L+I+G P SG PF+ +G+ Sbjct: 3 LRHQITACTLCADRFAATQTAHSPRPIVWFEPTARLLIVGQAPGKKVYKSGCPFTDPSGD 62 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNR-----NLSNIEMEICRPIIMRQIELIS 186 L L ++ R+ + I ++ P ++ + + +M + + Sbjct: 63 RLRDWLGVDETTFYDRSNVTIVPMAFCFPGNDKAGSDLPPPKVCGQTWHDSVMADLPDVK 122 Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KK 245 + + +G + T G W + T HP + KK Sbjct: 123 LR--ILVGASAHRYHLGVKTSATETVAG-WRDHAPD-----TFVLPHPSW--RNTAWLKK 172 Query: 246 NTW---HALITLKKALKNL 261 N W L L+ +K + Sbjct: 173 NPWFGAQVLPALRVRVKEV 191 >gi|86609874|ref|YP_478636.1| uracil-DNA glycosylase family protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558416|gb|ABD03373.1| putative uracil-DNA glycosylase, family 4 [Synechococcus sp. JA-2-3B'a(2-13)] Length = 240 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 35/231 (15%), Positives = 69/231 (29%), Gaps = 37/231 (16%) Query: 65 QQADSIAQKACSLHELKSLLRSFHDCHLCSTSL------------------STICATQTE 106 S A L++ + S C + Sbjct: 2 TTRRSEALGLQDWATLQTEIVSCCRCPRLVAWRESVALQKVARFRDQLYWGRPVPGFGDP 61 Query: 107 GQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKML-------------QSIEIMRTQIH 151 L +IG P+ N +G+ F+G G+ L + L + + + Sbjct: 62 QARLWVIGLAPAAHGGNRTGRVFTGDPSGDWLFRALYRAGFANQPTSTHREDGLQLQDCY 121 Query: 152 ISMISPWHPPGNRNLSNIEMEICRPIIMRQIEL-ISPKILLFIGNKTKNFFFNNDAQKTY 210 IS + PP N + IE + C + +++EL +++L +G+ Sbjct: 122 ISAVVRCVPPEN-RPTAIEAKTCLGYLKQELELLTQVRVILTLGHFAFQHALTLLPPLRP 180 Query: 211 QNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + + + LA+ HP + + T L + + L Sbjct: 181 RPRFGHNCVIPLAEGRYLLASYHPS--RRNTATRLLTEPMLDAVFAQAQQL 229 >gi|328907525|gb|EGG27291.1| uracil-DNA glycosylase, family 4 [Propionibacterium sp. P08] Length = 278 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 34/274 (12%), Positives = 68/274 (24%), Gaps = 46/274 (16%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P+ + + + + IA +L + + C Sbjct: 5 PHPRTADLFESPVPPGTGWPGDPASPDTPVAKNAEDVARIAAHCGKFEDLDAAISVCRAC 64 Query: 91 HLCSTSL------------------STICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131 T + + IIG P+ N +G+ F+G Sbjct: 65 PRLVTWREDTAVTKRAQWRDEPYWGRPAPSFGDPSARMAIIGLAPAAHGANRTGRMFTGD 124 Query: 132 -TGNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177 +G+ L + L + + I PP N S E C Sbjct: 125 QSGDWLYRALNDAGIASQAQSIDAADGLTLHDCRIIAPVHCAPPDNW-PSPDEKRTCAIW 183 Query: 178 IMRQIELISP-KILLFIGNKTKNFFF--------NNDAQKTYQNLG-KWSNLCTPHSIIP 227 ++ + + ++ +G G + + ++I Sbjct: 184 FDHELARLITMRAVMCLGQIAWTSTLAAARRLDWQVPRPAPRFGHGARTQLIRPDGAVIV 243 Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 L H Q + T L + L++L Sbjct: 244 VLGCYHVS--RQNTNTGRLTRTMLDDIVNTLQDL 275 >gi|296271083|ref|YP_003653715.1| uracil-DNA glycosylase superfamily protein [Thermobispora bispora DSM 43833] gi|296093870|gb|ADG89822.1| Uracil-DNA glycosylase superfamily [Thermobispora bispora DSM 43833] Length = 268 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 30/235 (12%), Positives = 64/235 (27%), Gaps = 44/235 (18%) Query: 44 KSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLST---- 99 + + +A ++ +L EL + C T Sbjct: 5 PPGSGWPGDPAAPETPVAHGAAEVAKLAAESRTLGELTARQSVCRACPRLVEWRETVADV 64 Query: 100 --------------ICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKML--- 140 + E +I+G P+ N +G+ F+G ++G+ L L Sbjct: 65 KRRAFATERYWGRPVPGWGEERPHTVIVGLAPAAHGGNRTGRIFTGDRSGDWLFASLYRT 124 Query: 141 ----------QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE--LISPK 188 + + PP ++ E + CRP + R++ S + Sbjct: 125 GLAAQETSTHAADGQRLLGARVLAAVRCAPP-ANRPTSEERDACRPWLSRELALVAESVR 183 Query: 189 ILLFIGNKTKNFF------FNNDAQKTYQNLGKWSNLCTPHSIIPT--LATVHPQ 235 +++ +G + G + + + L HP Sbjct: 184 VIVALGGFAWDALWPALADAGFTRPPRRPRFGHGAEVALEYRGAKVTLLGCYHPS 238 >gi|254293926|ref|YP_003059949.1| uracil-DNA glycosylase superfamily [Hirschia baltica ATCC 49814] gi|254042457|gb|ACT59252.1| Uracil-DNA glycosylase superfamily [Hirschia baltica ATCC 49814] Length = 223 Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 25/209 (11%), Positives = 56/209 (26%), Gaps = 32/209 (15%) Query: 82 SLLRSFHDCH-----LCSTSLS-------TICATQTEGQDLMIIGYTPSDSD-NISGKPF 128 C L + + L+I+G P + N + +PF Sbjct: 8 EAPSDCDRCPRLVEYLEEYRAKEPNWFNAPVPSFGPSNAKLLIVGLAPGVTGANRTARPF 67 Query: 129 SGKT-GNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSNIEMEIC 174 +G G++L ++ + + I+ PP N+ Sbjct: 68 TGDYAGDLLYATIEKFGFSKGKYDSRSDDGLELVDAMITNAVRCVPPQNKPTGPEINNCR 127 Query: 175 RPIIMRQIELISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231 ++ R L K++L +G + L P+ + + + Sbjct: 128 PFLVSRMQHLPQLKVILALGKIAHDSTVRTLGGKLSNYKFAHAAIHKLNGPNGALTMIDS 187 Query: 232 VHPQELIQYPLIKKNTWHALITLKKALKN 260 H + T + +++ Sbjct: 188 YHCS--RYNTNTGRLTTEMFENVFSRIQS 214 >gi|229819525|ref|YP_002881051.1| Uracil-DNA glycosylase superfamily [Beutenbergia cavernae DSM 12333] gi|229565438|gb|ACQ79289.1| Uracil-DNA glycosylase superfamily [Beutenbergia cavernae DSM 12333] Length = 294 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 28/238 (11%), Positives = 60/238 (25%), Gaps = 45/238 (18%) Query: 40 QRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLST 99 + R + + +A + +L +L + C Sbjct: 21 ASPVPPGAGWPDDVATARTPRARDAAAVERLAATSRTLTQLDARSSVCRACPRLVAWRED 80 Query: 100 I------------------CATQTEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKM 139 + L+I+G P+ N +G+ F+G ++G+ + Sbjct: 81 VAHTKRRAFAAEPYWGRPAPGLGDPAAHLVIVGLAPAAHGANRTGRLFTGDRSGDWIVAA 140 Query: 140 LQSIEIMRTQIH-------------ISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186 L I PP N + E C + R+++L++ Sbjct: 141 LHRAGYANQPTTEAAGDGLELRGARIVAAVRCAPPDN-APTPDERATCAGWLRRELQLLA 199 Query: 187 PKILLF--IGNKTKNFF------FNNDAQKTYQNLGKWSNLCTP---HSIIPTLATVH 233 P +G + G + + +A+ H Sbjct: 200 PTTTALLALGQVAWQATFAALKDLGWSVPRPRPAFGHGARASVRAPDGREVLVVASYH 257 >gi|99080497|ref|YP_612651.1| uracil-DNA glycosylase superfamily protein [Ruegeria sp. TM1040] gi|99036777|gb|ABF63389.1| Uracil-DNA glycosylase superfamily [Ruegeria sp. TM1040] Length = 200 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 63/200 (31%), Gaps = 27/200 (13%) Query: 78 HELKSLLRSFHDCHLCSTSLST------ICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 ELK + + C S T + ++I G P + SG+PF+ Sbjct: 6 DELKKEISACRLCAARFASTRTAHEPRPVVWF-EPSARILIAGQAPGMRVHQSGRPFTDS 64 Query: 132 TGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI---CRPIIMRQIELI 185 +G+ L + L + +++ I ++ P + +++ L Sbjct: 65 SGDRLREWLGLSEDCFYDTSRVAIVPMAFCFPGYDAKTADLPPPRICGETWHDRVMSALG 124 Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHP-----QELIQY 240 ++ + +G + T G W +L A HP L + Sbjct: 125 KLRLRILVGGHAHRYHLGTRLGVTELVKG-WRSLPEG-----VFALPHPSWRNTAWLKRN 178 Query: 241 PLIKKNTWHALITLKKALKN 260 P + L L+ +K Sbjct: 179 PWFEAEL---LPVLRARVKE 195 >gi|257453014|ref|ZP_05618313.1| DNA polymerase [Fusobacterium sp. 3_1_5R] gi|317059554|ref|ZP_07924039.1| DNA polymerase [Fusobacterium sp. 3_1_5R] gi|313685230|gb|EFS22065.1| DNA polymerase [Fusobacterium sp. 3_1_5R] Length = 191 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 67/185 (36%), Gaps = 12/185 (6%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 ELK S + L L + D++I+G P N + K G +G L Sbjct: 8 WEELKYGAASIGNTILKPHQLEVLIGGGNPDSDILILGDDPELYLNENLKTKEGSSGEFL 67 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 +L+ I + I++S +S ++ + E + +++ QI L+SPK+++ +G + Sbjct: 68 YLLLEFCGIQKEDIYVSTLSK-RNARLKDFMPEDYEKLKELLICQIGLLSPKVIVCLGYE 126 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL--IQYPLIKK-----NTWH 249 ++ + I T + + L KK + Sbjct: 127 AAQMLL-EKEINLEKDRQEVFTWKA---GIQVFVTYDVNTVKKARAELGKKAKLALEFRN 182 Query: 250 ALITL 254 L L Sbjct: 183 DLKKL 187 >gi|108802450|ref|YP_642646.1| uracil-DNA glycosylase superfamily protein [Mycobacterium sp. MCS] gi|119855276|ref|YP_935879.1| uracil-DNA glycosylase superfamily protein [Mycobacterium sp. KMS] gi|108772869|gb|ABG11590.1| Uracil-DNA glycosylase superfamily [Mycobacterium sp. MCS] gi|119697993|gb|ABL95064.1| Uracil-DNA glycosylase superfamily [Mycobacterium sp. KMS] Length = 155 Score = 69.4 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 60/142 (42%), Gaps = 2/142 (1%) Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170 M++G + + PF+G +G LD+ L + + + I + + HPP NR E Sbjct: 1 MVVGQSLCGPCMATQIPFTGGSGRFLDRALTAAGLAKADIFTTNVVHCHPPNNRPSLQHE 60 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFF--FNNDAQKTYQNLGKWSNLCTPHSIIPT 228 + CRP + R+I++++P++++ +G + A + T Sbjct: 61 ITNCRPYLRREIDIVTPRLIIALGRDARAALEYLLPTAPVQPWPFTRLPKAPTDADSPLL 120 Query: 229 LATVHPQELIQYPLIKKNTWHA 250 L HP + + P ++ + Sbjct: 121 LFAPHPSWIARQPRPDQDAYVD 142 >gi|218672130|ref|ZP_03521799.1| probable uracil-DNA glycosylase protein [Rhizobium etli GR56] Length = 210 Score = 69.4 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 60/191 (31%), Gaps = 20/191 (10%) Query: 75 CSLHELKSLLRSFHDCHLC--STSLSTICATQTE------GQDLMIIGYTPSDSDNISGK 126 L L+ + + C + + ++I G P + SG Sbjct: 5 AELETLRREIAACRICRDAPAKGAARRLPHEPRPVAVISSNARILIAGQAPGLRVHESGL 64 Query: 127 PFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSN-IEMEICRPIIMRQI 182 PF +G+ L L ++ R + I + P + ++ C P +++ Sbjct: 65 PFDDASGDRLRSWLGVDRATFYDRDRFAIVPMGFCFPGYDDKGADLPPRRECAPFWRQRV 124 Query: 183 ELISPKI--LLFIGNKTKNFFF--NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238 P+I +L IG + + T G W + L HP Sbjct: 125 ISAMPQIELVLVIGQYAQAWHMAGGGRGGMTETVRG-WRDSLMSGRSPAVLPLPHPSW-- 181 Query: 239 QYPLI-KKNTW 248 + K+N+W Sbjct: 182 RNSGWLKRNSW 192 >gi|86160049|ref|YP_466834.1| uracil-DNA glycosylase superfamily protein [Anaeromyxobacter dehalogenans 2CP-C] gi|85776560|gb|ABC83397.1| Uracil-DNA glycosylase superfamily [Anaeromyxobacter dehalogenans 2CP-C] Length = 226 Score = 69.4 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 30/200 (15%), Positives = 63/200 (31%), Gaps = 39/200 (19%) Query: 74 ACSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLMIIGY 115 A +L + + + C I + ++G Sbjct: 2 ADTLSAVAAEVVRCRACPRLVAWREQVAREKRRAYRDEVYWGRPIPGFGDARARIALVGL 61 Query: 116 TPSDSD-NISGKPFSG-KTGNMLDKMLQ-------------SIEIMRTQIHISMISPWHP 160 P N +G+ F+G ++G+ L L + I+ P Sbjct: 62 APGAHGSNRTGRMFTGDRSGDFLYAALHRAGLASQPSSRARDDGLALEGAWITSACRCAP 121 Query: 161 PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK---TKNFFFNNDAQKTYQNLGKW- 216 P N + E+E C P + R++ L++P++L+ +G+ ++ + ++ Sbjct: 122 PDN-RPTPDELERCAPFLDRELALLAPRVLVALGSVGWDAILAALRRAGRELPRPRPRFG 180 Query: 217 SNLCTPHSIIP-TLATVHPQ 235 +P L HP Sbjct: 181 HGAELRLPGLPAVLGCYHPS 200 >gi|163737724|ref|ZP_02145141.1| Uracil-DNA glycosylase superfamily protein [Phaeobacter gallaeciensis BS107] gi|161389250|gb|EDQ13602.1| Uracil-DNA glycosylase superfamily protein [Phaeobacter gallaeciensis BS107] Length = 197 Score = 69.4 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 26/199 (13%), Positives = 66/199 (33%), Gaps = 25/199 (12%) Query: 79 ELKSLLRSFHDCHLCSTSL------STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 +L+ +R+ C + + ++I G P + SG+PF+ + Sbjct: 6 DLRQEIRACRLCAGRFAATVTRHSPRPVVWF-DSAARILIAGQAPGARVHDSGRPFTDPS 64 Query: 133 GNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189 G+ L + L ++ ++ + I ++ P + +++ + + Sbjct: 65 GDRLREWLGLSEAQFYDQSLVAIVPMAFCFPGYSAKKADLPPPAICRTTWHDRVMDTLPN 124 Query: 190 L---LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KK 245 + + +G ++ + G W + HP + K+ Sbjct: 125 IGLRVLVGGYAHSYHLGGKQSVQARVEG-WRDHAPQE-----FPLPHPSW--RNTAWLKR 176 Query: 246 NTW--HALI-TLKKALKNL 261 N W L+ L+ ++ L Sbjct: 177 NPWFETDLLPVLRARVQEL 195 >gi|111022904|ref|YP_705876.1| hypothetical protein RHA1_ro05941 [Rhodococcus jostii RHA1] gi|110822434|gb|ABG97718.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length = 237 Score = 69.4 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 26/207 (12%), Positives = 57/207 (27%), Gaps = 44/207 (21%) Query: 70 IAQKACSLHELKSLLRSFHDCHLCSTSLSTI------------------CATQTEGQDLM 111 + + L + L C T+ L+ Sbjct: 1 MGAALTDIAGLDAQLIECRACPRLVEWRETVAREKRASFRDETYWGRPVPGFGPPDASLL 60 Query: 112 IIGYTPSDSD-NISGKPFSG-KTGNMLDKMLQS-------------IEIMRTQIHISMIS 156 I+G P+ N +G+ F+G ++G+ L L + + + I+ Sbjct: 61 IVGLAPAAHGANRTGRMFTGDRSGDFLYAALHAVGLASQPTATHIGDGLELFGVRITSPV 120 Query: 157 PWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFF--------NNDA 206 PP + +E + CR + ++ ++ P + ++ +G Sbjct: 121 HCAPP-ANKPTPVERDNCRHWLDAELRILQPHLRSVIVLGGFGWQSLLPVLDDAGWAVPR 179 Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVH 233 + G L + H Sbjct: 180 PRPKFGHGAHVELPGAERPLHLFGCYH 206 >gi|15965633|ref|NP_385986.1| hypothetical protein SMc04210 [Sinorhizobium meliloti 1021] gi|307314037|ref|ZP_07593650.1| Uracil-DNA glycosylase superfamily [Sinorhizobium meliloti BL225C] gi|307321214|ref|ZP_07600616.1| Uracil-DNA glycosylase superfamily [Sinorhizobium meliloti AK83] gi|15074814|emb|CAC46459.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021] gi|306893116|gb|EFN23900.1| Uracil-DNA glycosylase superfamily [Sinorhizobium meliloti AK83] gi|306899159|gb|EFN29798.1| Uracil-DNA glycosylase superfamily [Sinorhizobium meliloti BL225C] Length = 209 Score = 69.4 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 29/214 (13%), Positives = 64/214 (29%), Gaps = 33/214 (15%) Query: 73 KACSLHELKSLLRSFHDCHLCSTSLSTICATQTE-------------GQDLMIIGYTPSD 119 L L++ + C ++I G P Sbjct: 2 TEEQLQALRAAISVCRRCRDEPAR-----GEGHRLPHEPRPVAVLSASARILIAGQAPGL 56 Query: 120 SDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEI 173 + SG PF+ +G+ L + L ++ + I + + +L Sbjct: 57 RVHESGLPFNDASGDRLRQWLSVDRAAFYDQRNFAIVPMGFCFPGYDRHGSDLPPRSECA 116 Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNND-AQKTYQNLGKWSNLCTPHSIIPTLATV 232 + +++L +G+ + + D + + + W +S I L Sbjct: 117 PLWRQRAMDAMPQIELVLAVGHYAQRWHLGTDCPKSMTETVRNWQRYAKRNSGISVLPLP 176 Query: 233 HPQ-----ELIQYPLIKKNTWHALITLKKALKNL 261 HP L ++P + L L++ ++ L Sbjct: 177 HPSWRNTGWLRRHPWFEAEL---LPFLRERVQAL 207 >gi|126728254|ref|ZP_01744070.1| Uracil-DNA glycosylase superfamily protein [Sagittula stellata E-37] gi|126711219|gb|EBA10269.1| Uracil-DNA glycosylase superfamily protein [Sagittula stellata E-37] Length = 197 Score = 69.4 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 64/200 (32%), Gaps = 22/200 (11%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQT-----EGQDLMIIGYTPSDSDNISGKPFSG 130 L L + +R C + T A Q L+I G P + SGKPF+ Sbjct: 3 DLSALIADVRGCRLCEQRFAATETAHAPQPVLRAQPSARLLIAGQAPGMKVHHSGKPFTD 62 Query: 131 KTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR--QIELI 185 +G+ L L T++ I + P + IC L Sbjct: 63 PSGDRLRDWLGLDAETFYDETRVAILPMGFCFPGYRKGSDLPPPAICARTWRASLMDRLS 122 Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-K 244 ++ L IG + + + Q + W + L HP + K Sbjct: 123 DVRLTLPIGGIAQRWHLGVTSNV-TQTVANWRDFLPD-----ALPLPHPSW--RNTGWLK 174 Query: 245 KNTW--HALI-TLKKALKNL 261 +N W L+ L+ ++ + Sbjct: 175 RNPWFADDLLPVLRARVREV 194 >gi|297567525|ref|YP_003686497.1| Uracil-DNA glycosylase superfamily [Meiothermus silvanus DSM 9946] gi|296851974|gb|ADH64989.1| Uracil-DNA glycosylase superfamily [Meiothermus silvanus DSM 9946] Length = 221 Score = 69.4 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 63/220 (28%), Gaps = 37/220 (16%) Query: 76 SLHELKSLLRSFHDCHL------------------CSTSLSTICATQTEGQDLMIIGYTP 117 +L L + L S C + ++++ G P Sbjct: 2 NLSTLHAELVSCTRCPRLVGWRERVGREKRRAYLEWEYWAKPVPGFGDPQAEILLFGLAP 61 Query: 118 SDSD-NISGKPFSGK-TGNMLDKMLQS-------------IEIMRTQIHISMISPWHPPG 162 N +G+PF+G +G+ L L + ++I+ PP Sbjct: 62 GAHGSNRTGRPFTGDASGDFLYPALYRAGLANQPLSRHRGDGLELRHVYITSAVRCAPPD 121 Query: 163 NRNLSNIEMEICRPIIMRQIE-LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221 N E+ C R++ L + ++ L IG N A + Sbjct: 122 N-KPLPEELRNCSAWTNRELPLLPNVRVYLAIGRVGHEALLNYHALRKSAYPFAHGAEFR 180 Query: 222 PHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 L T H Q K T L T+ + K L Sbjct: 181 LPEGRVLLDTYHVS--RQNTNTGKLTAEMLDTVLERAKQL 218 >gi|222148516|ref|YP_002549473.1| hypothetical protein Avi_2054 [Agrobacterium vitis S4] gi|221735502|gb|ACM36465.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 211 Score = 69.4 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 28/200 (14%), Positives = 60/200 (30%), Gaps = 21/200 (10%) Query: 74 ACSLHELKSLLRSFHDCHLCSTSLSTICATQTE------GQDLMIIGYTPSDSDNISGKP 127 L L++ + + C C T ++ + ++I G P + +G P Sbjct: 6 PRDLKGLRAAIHACRICRDCPTQVTALPHEPRPVVVLSSTARILIAGQAPGKRVHETGLP 65 Query: 128 FSGKTGNMLDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMR 180 F+ +G+ L + L + I + P G+ E Sbjct: 66 FNDASGDRLRQWLGVDREAFYDSRNFAILPMGFCFPGYDASGHDLPPRRECAPHWREAAM 125 Query: 181 QIELISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHS-IIPTLATVHPQ--- 235 ++ + +++L IG + + + + + W + L HP Sbjct: 126 EV-MPQVELVLAIGQYAQRWHMCDLRKPTLHATVESWRESFFTNRPGPKILPLPHPSWRN 184 Query: 236 --ELIQYPLIKKNTWHALIT 253 L + P + L Sbjct: 185 SGWLRRNPWFEAELLPVLKK 204 >gi|313127673|ref|YP_004037943.1| uracil-DNA glycosylase [Halogeometricum borinquense DSM 11551] gi|312294038|gb|ADQ68498.1| uracil-DNA glycosylase [Halogeometricum borinquense DSM 11551] Length = 220 Score = 69.4 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 21/168 (12%), Positives = 51/168 (30%), Gaps = 18/168 (10%) Query: 85 RSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSD----SDNISGKPFSGK------TG 133 C L + + +M++G P ++ G +G +G Sbjct: 31 ADCTRCPELVACRTRISWGNGSSDASVMVVGEAPGAGDPDAEQWQGGNHTGMAYTTRHSG 90 Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI----EMEICRPIIMRQIELISPKI 189 + K++ + + + P + E CR + +++ I P++ Sbjct: 91 RRIRKLIAAAGHA--DAYYTNAVKCVPCDGDGSNREPTATERANCRTHLDTELDAIEPEV 148 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSN-LCTPHSIIPTLATVHPQE 236 ++ G D ++ L + + + L +HP Sbjct: 149 VVSTGKHATATMLAFDGRELDGFLDTVLDPVELDAFDVMLLPLLHPSY 196 >gi|251796290|ref|YP_003011021.1| uracil-DNA glycosylase superfamily [Paenibacillus sp. JDR-2] gi|247543916|gb|ACT00935.1| Uracil-DNA glycosylase superfamily [Paenibacillus sp. JDR-2] Length = 197 Score = 69.4 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 33/196 (16%), Positives = 66/196 (33%), Gaps = 27/196 (13%) Query: 76 SLHELKSLLRSFHDCHLCSTSL-STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 S HE+K + S DC + +M IG PS + SG PF+ +G Sbjct: 2 SFHEIKEQIISCQDCKQKFGFTPHPVF-HGKAQSKIMQIGQAPSKKVHESGLPFNDPSGA 60 Query: 135 MLDKMLQ----SIEIMRTQIHISMISPWHPPGNRN--LSNIEMEICRPIIMRQIELISPK 188 L ++ +++ ++ P + + + + ++IE++ + Sbjct: 61 KLKYQWYQITDAMFYNEDNFYMTGLAHCFPGKHPKGGDNPPPLACANKWLAKEIEMVDNE 120 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL----------- 237 I + IG + + F + + + P L HP L Sbjct: 121 IYIIIGARAAKYLFPKRSFEDLVLK------NNQINGKPALVLPHPSPLNVRWFKTHPSF 174 Query: 238 --IQYPLIKKNTWHAL 251 + P +++ W L Sbjct: 175 EEKRIPEVREMVWDVL 190 >gi|110668860|ref|YP_658671.1| hypothetical protein HQ2967A [Haloquadratum walsbyi DSM 16790] gi|109626607|emb|CAJ53071.1| conserved hypothetical protein [Haloquadratum walsbyi DSM 16790] Length = 211 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 54/160 (33%), Gaps = 15/160 (9%) Query: 86 SFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT-GNMLDKMLQSI 143 +C LC T + + G D + + P + +G PF+G G L +L + Sbjct: 17 ECENCPGLCETRENVLHGYGDVGGDFIFVAERPHAGADQTGVPFTGDDAGRHLQTILGQL 76 Query: 144 EIMRTQI----------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 RT ++ ++ P + E+ C P + +I +I+P+I++ I Sbjct: 77 GFARTPPDADEPDIQNAFLTYVTRCRHPDRTAT-DEEIRACEPYLNAEIRMINPEIIIPI 135 Query: 194 GNKTKNFFFNNDAQKTYQNLGKW--SNLCTPHSIIPTLAT 231 G T + + + + Sbjct: 136 GETTLRELAIDYTTRRPDSFDIVEEHATTIRGRGFELVPM 175 >gi|311893795|dbj|BAJ26203.1| putative uracil-DNA glycosylase [Kitasatospora setae KM-6054] Length = 269 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 59/196 (30%), Gaps = 36/196 (18%) Query: 42 KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL---- 97 + + + ++A + L L +L+ C Sbjct: 2 EPPAPPALPTRPDPNDPNDPNDPGYPAALAPRTRDLAALDALVVDCRACPRLVAWREETA 61 Query: 98 --------------STICATQTEGQDLMIIGYTPSDS-DNISGKPFSGKT-GNMLDKMLQ 141 I L+++G P+ N +G+ F+G G++L L Sbjct: 62 LTKRRAFREQEYWARPIPGFGPHDARLVLVGLAPAAHGGNRTGRIFTGDPSGDLLYASLH 121 Query: 142 -------------SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP- 187 + + I+ PP N SN E + CRP I+R+ E + P Sbjct: 122 RLGLANRPESHWRDDGLRLRGVRITDPVRCAPPEN-KPSNTERDTCRPWIVREFEQLRPT 180 Query: 188 -KILLFIGNKTKNFFF 202 + ++ +G Sbjct: 181 VRAVVALGGFAWQAAL 196 >gi|269838087|ref|YP_003320315.1| uracil-DNA glycosylase superfamily [Sphaerobacter thermophilus DSM 20745] gi|269787350|gb|ACZ39493.1| Uracil-DNA glycosylase superfamily [Sphaerobacter thermophilus DSM 20745] Length = 225 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 72/194 (37%), Gaps = 19/194 (9%) Query: 54 TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCST--SLSTICATQTEGQDLM 111 T H ++ + L ++ +R+ C + GQ +M Sbjct: 8 TGEAMAHRVAEDLRITVEDRQRRLEAHQAAIRACTACVAAGFIPESRPVF-RGHTGQRIM 66 Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM----RTQIHISMISPWHP------P 161 +IG P++ + P+SG +G L + L + +++ ++ P Sbjct: 67 VIGQAPAEHREENPIPYSGASGRTLRRWLAQAGFPEDALHERCYLTSLTKCFPGPSRSGK 126 Query: 162 GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221 G+R S E+ +CRP + +I L+ P+++L +G +F N + L + Sbjct: 127 GDRAPSAREIALCRPHLEGEIALVQPEVILALGRLASTYFVGN------RPLAQLVGQSF 180 Query: 222 PHSIIPTLATVHPQ 235 H + HP Sbjct: 181 THGTAVVVPLPHPS 194 >gi|302348695|ref|YP_003816333.1| Uracil-DNA glycosylase [Acidilobus saccharovorans 345-15] gi|302329107|gb|ADL19302.1| Uracil-DNA glycosylase [Acidilobus saccharovorans 345-15] Length = 244 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 29/215 (13%), Positives = 66/215 (30%), Gaps = 40/215 (18%) Query: 81 KSLLRSFHDCHLCS------------------TSLSTICATQTEGQDLMIIGYTPSDS-D 121 + + S + C + + ++++G P+ Sbjct: 25 QDAILSCNRCPRLRRFDVEVGLNPPRRFRGQAYWSRPVPSLGDPLAPIVVVGMAPAPHGG 84 Query: 122 NISGKPFSGK-TGNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLS 167 N +G+ F+G +GN + L + + ++I+ PP N Sbjct: 85 NRTGRMFTGDQSGNNFFRALYEACLANKPTSVSRDDGLQVYHVYITASLHCAPPDN-KPL 143 Query: 168 NIEMEICRPIIMRQIE-LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII 226 E+ C P + ++ L + ++ + +G + + G + P Sbjct: 144 REEIGNCFPYLKEELSLLPNARVFVALGRLAFDQLCKVFNVRFEFKHG--AEYRLPD-GR 200 Query: 227 PTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 +A+ HP + T L + + K L Sbjct: 201 WLIASYHPSP--RNVNTGTLTIEDLRNIFERAKQL 233 >gi|300711122|ref|YP_003736936.1| uracil-DNA glycosylase superfamily [Halalkalicoccus jeotgali B3] gi|299124805|gb|ADJ15144.1| uracil-DNA glycosylase superfamily [Halalkalicoccus jeotgali B3] Length = 209 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 23/164 (14%), Positives = 55/164 (33%), Gaps = 14/164 (8%) Query: 85 RSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG-KTGNMLDKMLQS 142 +C LC G + + +G PS + +G PF G + G ++L + Sbjct: 16 EDCTNCPDLCEARTEIAHGYGDVGAEFLFVGERPSPGADETGIPFFGDERGEAFQEILHA 75 Query: 143 IEI---------MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 + +++++++ P + E+ C P + +I +I+P+I++ + Sbjct: 76 LGFAGQDPGEKPELDNVYLTLLTRCRHPER-PPTEAEIGNCEPYLNAEIRMINPEIIVPV 134 Query: 194 GNKTKNFFFNNDAQKTYQNL--GKWSNLCTPHSIIPTLATVHPQ 235 G + + + + P Sbjct: 135 GQRALEEIATEYTTTPAEEFDIEADHATEIRGRGFELVPMIDPA 178 >gi|167754985|ref|ZP_02427112.1| hypothetical protein CLORAM_00489 [Clostridium ramosum DSM 1402] gi|167705035|gb|EDS19614.1| hypothetical protein CLORAM_00489 [Clostridium ramosum DSM 1402] Length = 191 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 69/201 (34%), Gaps = 26/201 (12%) Query: 75 CSLHELKSLLRSFHDCHLCST-SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 ELK ++ C + +M I PS + + + KPF+ +G Sbjct: 2 KDFGELKQKIQECRYCQRQFGYEPHPVVW-GKPNAKIMQISQAPSLNVHNTLKPFNDLSG 60 Query: 134 NMLDKMLQSIE----IMRTQIHISMISPWHPPGNRNLSNIEMEIC--RPIIMRQIELISP 187 L + I+ + +I+ ++ +P +++ + C + ++I+++ Sbjct: 61 KKLREKWYDIDDETFYDQNNFYIASLAHCYPGKSKSGGDRLPPKCCSEKWLRQEIDIVDN 120 Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY-----P- 241 +I + IG+ F N + N P HP L + P Sbjct: 121 QIYIIIGSYAAKKIFPNQNFVDLIFNDQVFN------GKPAYVLPHPSPLNRRWFKTYPE 174 Query: 242 -LIKKNTWHALITLKKALKNL 261 K+ ++ +K+L Sbjct: 175 FEAKRV-----KEIRAVIKSL 190 >gi|237735289|ref|ZP_04565770.1| uracil-DNA glycosylase [Mollicutes bacterium D7] gi|229381034|gb|EEO31125.1| uracil-DNA glycosylase [Coprobacillus sp. D7] Length = 191 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 69/201 (34%), Gaps = 26/201 (12%) Query: 75 CSLHELKSLLRSFHDCHLCST-SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 ELK ++ C + +M I PS + + + KPF+ +G Sbjct: 2 KDFGELKQKIQECRYCQRQFGYEPHPVVW-GKPNAKIMQISQAPSLNVHNTLKPFNDLSG 60 Query: 134 NMLDKMLQSIE----IMRTQIHISMISPWHPPGNRNLSNIEMEIC--RPIIMRQIELISP 187 L + I+ + +I+ ++ +P +++ + C + ++I+++ Sbjct: 61 KKLREEWYDIDDETFYDQNNFYIASLAHCYPGKSKSGGDRLPPKCCSEKWLRQEIDIVDN 120 Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY-----P- 241 +I + IG+ F N + N P HP L + P Sbjct: 121 QIYIIIGSYAAKKIFPNQNFVDLIFNDQVFN------GKPAYVLPHPSPLNRRWFKTYPE 174 Query: 242 -LIKKNTWHALITLKKALKNL 261 K+ ++ +K+L Sbjct: 175 FEAKRV-----KEIRAVIKSL 190 >gi|307823886|ref|ZP_07654114.1| Uracil-DNA glycosylase superfamily [Methylobacter tundripaludum SV96] gi|307735180|gb|EFO06029.1| Uracil-DNA glycosylase superfamily [Methylobacter tundripaludum SV96] Length = 187 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 54/146 (36%), Gaps = 11/146 (7%) Query: 99 TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM----RTQIHISM 154 + + +++IG P D + GKPF+ G + K + I + R +++++ Sbjct: 4 PVVSGSPVLSKILLIGQAPGDKEGGFGKPFAWTAGKTMFKWFERIGLDEQAFRQRVYMAA 63 Query: 155 ISPWHPPGNRN-----LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209 + P N S E++ C + +++L+ P ++L +G Sbjct: 64 VCRCFPGKNPKGGDRVPSPAEIDNCAGWLQAEVDLLKPDLILPVGKLAIGQLMPVKRLN- 122 Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQ 235 +GK + + HP Sbjct: 123 -DVIGKLHPVTFHGHRTEAIPLPHPS 147 >gi|118615943|ref|YP_904275.1| glycosylase [Mycobacterium ulcerans Agy99] gi|118568053|gb|ABL02804.1| glycosylase [Mycobacterium ulcerans Agy99] Length = 251 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 66/169 (39%), Gaps = 11/169 (6%) Query: 79 ELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L + + C + + + + +IG + + S PF+G +G ++ Sbjct: 21 ALDAEIAGCRRCEGMNIAPATMSAPGYGCVSSPVALIGQSLCEKCMESQVPFTGGSGELI 80 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 D+ +Q + + IS HPP NR+ E+ C P + R++E++ P++++ +G Sbjct: 81 DESIQRAGREKEDVFISDAVHCHPPKNRSSHQHEIVDCSPYLHRELEIVRPRLVVALGRD 140 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATV---HPQELIQY 240 + + + + + +P + HP + + Sbjct: 141 GERVL--TFFYPSARICEELFEIPRGRLPKGVPYI--FHVKHPSWIQRQ 185 >gi|327189381|gb|EGE56549.1| putative uracil-DNA glycosylase protein [Rhizobium etli CNPAF512] Length = 362 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 68/218 (31%), Gaps = 20/218 (9%) Query: 48 SAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC---HLCSTSLSTIC--- 101 A P++ R S + L L+ + + C + Sbjct: 130 PARIPVSTRRCASSGESSGGSKVMTDEARLETLRREIAACRICRDAPAKGPAHRLPHEPR 189 Query: 102 --ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMIS 156 A + ++I G P + SG PF +G+ L L ++ R + I + Sbjct: 190 PVAVISSNARILIAGQAPGLRVHESGLPFDDASGDRLRSWLGVDRASFYDRDRFAIVPMG 249 Query: 157 PWHPPGNRNLSN-IEMEICRPIIMRQIELISPKI--LLFIGNKTKNFFF--NNDAQKTYQ 211 P + ++ C P +++ P+I +L IG + + T Sbjct: 250 FCFPGYDDKGADLPPRRECAPFWRQRVLSAMPQIELVLVIGQYAQAWHMAGGGQGGMTET 309 Query: 212 NLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248 G W + L HP + K+N+W Sbjct: 310 VRG-WRDSLMSGRSPAVLPLPHPSW--RNSGWLKRNSW 344 >gi|254465806|ref|ZP_05079217.1| uracil-DNA glycosylase superfamily [Rhodobacterales bacterium Y4I] gi|206686714|gb|EDZ47196.1| uracil-DNA glycosylase superfamily [Rhodobacterales bacterium Y4I] Length = 197 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 69/200 (34%), Gaps = 27/200 (13%) Query: 79 ELKSLLRSFHDCHLCSTSLSTICA-----TQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 +LK+ +R+ C + +T A ++I G P + SG+PF+ +G Sbjct: 6 QLKAQIRNCRICAERFAATATAHAPRPVVWFRPTARILIAGQAPGARVHDSGRPFTDPSG 65 Query: 134 NMLDKML---QSIEIMRTQIHISMISPWHPPGNRN-----LSNIEMEICRPIIMRQIELI 185 + L L ++ + ++ + + P N + ++M ++ + Sbjct: 66 DRLRAWLGLTEAEFYDKDRVAVVPMGFCFPGYNDKKADLPPPAVCSRTWHHLVMAELPDV 125 Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-K 244 K + +G + + A T G W + HP + K Sbjct: 126 QLK--VLVGAHAQRYHLRAKAPVTELVRG-WRDHAPQ-----VFPLPHPSW--RNTAWLK 175 Query: 245 KNTW---HALITLKKALKNL 261 KN W L L+ +K L Sbjct: 176 KNPWFEAELLPVLQARVKEL 195 >gi|15790287|ref|NP_280111.1| hypothetical protein VNG1228C [Halobacterium sp. NRC-1] gi|169236019|ref|YP_001689219.1| hypothetical protein OE2758R [Halobacterium salinarum R1] gi|10580757|gb|AAG19591.1| conserved hypothetical protein [Halobacterium sp. NRC-1] gi|167727085|emb|CAP13871.1| conserved hypothetical protein [Halobacterium salinarum R1] Length = 210 Score = 69.0 bits (167), Expect = 7e-10, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 58/182 (31%), Gaps = 20/182 (10%) Query: 85 RSFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT-GNMLDKMLQS 142 +C LC + G D + + +PS + +G P G G +L S Sbjct: 16 EDCRNCAGLCDQRERVVHGYGDVGADFVFVAESPSAASEAAGVPLVGDDAGERFQHILGS 75 Query: 143 IEIMRT----------QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192 + + + +++++S P E C P + I +I+P++L+ Sbjct: 76 VGLNHSLPSSTEPELANAYVTLLSRCRHPDREAT-ADERTRCEPYLNADIRMINPEVLVP 134 Query: 193 IGNKTKNFFFNNDAQKTYQNL--GKWSNLCTPHSIIPTLATVHPQELIQ-YPLIKKNTWH 249 +G + +L + + +HP + + + W Sbjct: 135 VGQRALTELGKEYTTTPADSLAVTELHGDTVRGRGFELVPMIHP----REQSDAQTDAWI 190 Query: 250 AL 251 Sbjct: 191 DF 192 >gi|307327193|ref|ZP_07606381.1| Uracil-DNA glycosylase superfamily [Streptomyces violaceusniger Tu 4113] gi|306887084|gb|EFN18082.1| Uracil-DNA glycosylase superfamily [Streptomyces violaceusniger Tu 4113] Length = 258 Score = 68.6 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 33/221 (14%), Positives = 57/221 (25%), Gaps = 46/221 (20%) Query: 58 HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHL------------------CSTSLST 99 + A A +L EL L C Sbjct: 2 TTSASAPSYPAQSAPGAETLAELDERLIDCRACPRLVGWREETARTKRRAYADWDYWGRP 61 Query: 100 ICATQTEGQDLMIIGYTPSDS-DNISGKPFSGKT-GNMLDKMLQS-------------IE 144 + + I+G P+ N +G+ F+G G+ L L Sbjct: 62 VPGFGPPDASVAIVGLAPAAHGGNRTGRMFTGDRAGDFLYSALYDLGLANRRTATHRGDG 121 Query: 145 IMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFF 202 + + I+ PP + E + CRP + R++ L+ P + + +G Sbjct: 122 LELRGVRITSPVHCAPP-ANRPTPGERDTCRPWLARELRLLRPTVRSAVVLGAFGWQAVL 180 Query: 203 --------NNDAQKTYQNLGKWSNLCTPHSIIP--TLATVH 233 + + G S L P H Sbjct: 181 PALEAAGWSVPRPRPVFGHGARSTLRAADGGAPLTLFGCYH 221 >gi|289208766|ref|YP_003460832.1| uracil-DNA glycosylase superfamily [Thioalkalivibrio sp. K90mix] gi|288944397|gb|ADC72096.1| Uracil-DNA glycosylase superfamily [Thioalkalivibrio sp. K90mix] Length = 212 Score = 68.6 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 22/175 (12%), Positives = 49/175 (28%), Gaps = 29/175 (16%) Query: 86 SFHDCHLCST------SLST------ICATQTEGQDLMIIGYTPSDSDNI-SGKPFSGKT 132 C + + + + L+I+G P +G+PF+G Sbjct: 12 HCRRCPRLAGFLDDVRAKHPDYHAAPVASFGPLDARLLIVGLAPGMHGANATGRPFTGDY 71 Query: 133 -GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPII 178 G +L + L I+ PP N + E+ C + Sbjct: 72 AGVLLYETLHQYGFATAPESVSADDGLQLLDCRITNAVKCLPPQN-KPTTEEIRTCNGFL 130 Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 +++ + P+++L +G + + + + H Sbjct: 131 ASEMDAMQPRVILALGKIAHDAVLRARGLPLSSLRFA-HGAEHALDGMRLIDSYH 184 >gi|257462673|ref|ZP_05627082.1| DNA polymerase [Fusobacterium sp. D12] gi|317060321|ref|ZP_07924806.1| DNA polymerase [Fusobacterium sp. D12] gi|313685997|gb|EFS22832.1| DNA polymerase [Fusobacterium sp. D12] Length = 191 Score = 68.6 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 68/185 (36%), Gaps = 12/185 (6%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 +LK + + L L + D++I+G P N + K G +G L Sbjct: 8 WEDLKYGASNIGNTILKPHQLEVLIGGGNPDADILILGDDPELYLNENLKTQKGSSGEFL 67 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 +L+ I + I++S ++ ++ + E + +++ QI L++PK+++ +G + Sbjct: 68 YLLLEFCGIQKEDIYVSTLTK-RNARLKDYMPEDYEKLKELLICQIGLLAPKVIVCLGYE 126 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL--IQYPLIKK-----NTWH 249 + + + I L T + + L KK + Sbjct: 127 AAQMLL-EKEIVLEEARQEVFSWKA---GIQVLVTYDVNTVKKARAELGKKAKLALEFRN 182 Query: 250 ALITL 254 L L Sbjct: 183 DLKKL 187 >gi|55377052|ref|YP_134902.1| uracil DNA glycosylase superfamily protein [Haloarcula marismortui ATCC 43049] gi|55229777|gb|AAV45196.1| uracil DNA glycosylase superfamily protein [Haloarcula marismortui ATCC 43049] Length = 208 Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 60/163 (36%), Gaps = 13/163 (7%) Query: 85 RSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143 +C LC T + + G + +++G +P+ + SG PF+G+ L +L ++ Sbjct: 16 EECQNCPALCETRENVVHGYGDVGAEFIVLGDSPAVGADESGLPFTGENERELLDILAAV 75 Query: 144 EIM---------RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 ++ ++ ++ P + E+ C P + +I +I+P+ILL +G Sbjct: 76 DMCSDPDADRPQLQNTFLTYVTRCRHPDREAT-DEEVVNCEPYLNSEIRMINPEILLPVG 134 Query: 195 NKTKNFFFNNDAQKTYQNL--GKWSNLCTPHSIIPTLATVHPQ 235 + + L L + P Sbjct: 135 QRPLEELAFEYTTMSEDELDIEDRHATTIRGRGFEILPMIPPS 177 >gi|282860587|ref|ZP_06269653.1| Uracil-DNA glycosylase superfamily [Streptomyces sp. ACTE] gi|282564323|gb|EFB69859.1| Uracil-DNA glycosylase superfamily [Streptomyces sp. ACTE] Length = 268 Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 31/232 (13%), Positives = 62/232 (26%), Gaps = 51/232 (21%) Query: 49 AIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHL---------------- 92 A P P + + S L EL + C Sbjct: 6 AADPAPGAEDPGFPAYRASRSTG-----LAELDRRVAGCRACPRLVAWREEVAEVKRAAF 60 Query: 93 --CSTSLSTICATQTEGQDLMIIGYTPSDS-DNISGKPFSGK-TGNMLDKMLQSIEIMRT 148 + + ++G P+ N +G+ F+G TG+ L L ++ + Sbjct: 61 QEWDYWGRPVPGFGPPDATVAVVGLAPAAHGGNRTGRMFTGDATGDFLFAALHAVGLASQ 120 Query: 149 QIHI-------------SMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFI 193 + + PP + +E + CRP + +++L+SP + ++ + Sbjct: 121 PTSVDAGDGLTLRGVRLTSPVHCAPP-ANRPTPLERDNCRPWLAAELDLLSPGLRAVVVL 179 Query: 194 GNKTKNFF----------FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 G + L + HP Sbjct: 180 GGFGWQALLPVLAEAGWRLPRPRPAFGHGAHVVLPATEHRQELHLLGSYHPS 231 >gi|226365411|ref|YP_002783194.1| uracil-DNA glycosylase [Rhodococcus opacus B4] gi|226243901|dbj|BAH54249.1| putative uracil-DNA glycosylase [Rhodococcus opacus B4] Length = 237 Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 26/207 (12%), Positives = 56/207 (27%), Gaps = 44/207 (21%) Query: 70 IAQKACSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLM 111 + + L + L C + L+ Sbjct: 1 MGAALTDIAGLDAQLIECRACPRLVEWREQVAREKRASFRDETYWGRPVPGFGPADAPLL 60 Query: 112 IIGYTPSDSD-NISGKPFSG-KTGNMLDKMLQS-------------IEIMRTQIHISMIS 156 I+G P+ N +G+ F+G ++G+ L L + + + I+ Sbjct: 61 IVGLAPAAHGANRTGRMFTGDRSGDFLYAALHAVGLASQPTATHIGDGLELFGVRITSPV 120 Query: 157 PWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFF--------NNDA 206 PP + E + CR + ++ ++ P + ++ +G Sbjct: 121 HCAPP-ANKPTPEERDNCRRWLDAELRILQPGLRSVIVLGGFGWQSLLPVLDDAGWAVPR 179 Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVH 233 + G L P + H Sbjct: 180 PRPKFGHGAHVELAGPERPLHLFGCYH 206 >gi|254512079|ref|ZP_05124146.1| uracil-DNA glycosylase superfamily protein [Rhodobacteraceae bacterium KLH11] gi|221535790|gb|EEE38778.1| uracil-DNA glycosylase superfamily protein [Rhodobacteraceae bacterium KLH11] Length = 195 Score = 68.2 bits (165), Expect = 9e-10, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 61/201 (30%), Gaps = 30/201 (14%) Query: 81 KSLLRSFHDCHLCSTS---------LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 +SL+ C LC+ + G ++I G P + SG+PF+ Sbjct: 2 ESLISEIEACRLCADRFAQTATAHTPRPVVWF-RPGARILIAGQAPGARVHASGRPFTDP 60 Query: 132 TGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRN----LSNIEMEICRPIIMRQIEL 184 +G+ L L + R + I ++ P N + Sbjct: 61 SGDRLRDWLGLDEGAFYDRAHVAIVPMAFCFPGYNARKADLPPPPICGRTWHDRVMAALG 120 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI- 243 P + + +G + T +W + A HP + Sbjct: 121 DMP-LTVLVGGHAHKYHLGAKTPVTEAVR-RWRDHAP-----RVFALPHPSW--RNTAWL 171 Query: 244 KKNTW--HALI-TLKKALKNL 261 KKN W L+ L+ ++ + Sbjct: 172 KKNPWFEADLLPVLRARVQEV 192 >gi|317126569|ref|YP_004100681.1| uracil-DNA glycosylase [Intrasporangium calvum DSM 43043] gi|315590657|gb|ADU49954.1| Uracil-DNA glycosylase superfamily [Intrasporangium calvum DSM 43043] Length = 280 Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 30/242 (12%), Positives = 60/242 (24%), Gaps = 49/242 (20%) Query: 40 QRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLST 99 + + + A + EL + + C + Sbjct: 17 PSPVPPGTGWPGDPATGATPVAATAAEVRRLGAAALTPAELDARVSVCRACPRLVAWRES 76 Query: 100 I-------------------CATQTEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDK 138 + + ++I+G P+ + N +G+ F+G ++G+ L Sbjct: 77 VATRGRRASFADQPYWGRPGPSFGDPAASVLIVGLAPAANGTNRTGRMFTGDRSGDWLYA 136 Query: 139 MLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR--QIE 183 L T I I PP S E C + R ++ Sbjct: 137 ALHRAGYASQPTSVAAGDGLELTGIRIVATVRCAPP-ANRPSTEEKATCSGWLARDLELT 195 Query: 184 LISP---KILLFIGNKTKNFFFN-NDAQKTYQNLGKWSN--------LCTPHSIIPTLAT 231 P + LL +G+ + K + + L + Sbjct: 196 SAGPGGLRTLLALGSIGWDGVLGAARRLGWQVPRPKPRFGHGAEAALALPDGTDVRLLGS 255 Query: 232 VH 233 H Sbjct: 256 YH 257 >gi|148508232|gb|ABQ76019.1| conserved hypothetical protein [uncultured haloarchaeon] Length = 242 Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 55/160 (34%), Gaps = 15/160 (9%) Query: 86 SFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT-GNMLDKMLQSI 143 +C LC T + + G D + + P + +G PF+G G L +L + Sbjct: 48 ECENCPGLCETRENVLHGYGDVGGDFIFVAERPHAGADQTGVPFTGDDAGRQLQAILGQL 107 Query: 144 EIMRTQI----------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 RT ++ ++ P + E+ C P + +I +I+P+I++ I Sbjct: 108 GFARTPPDADEPDIQNAFLTYVTRCRHPDRTAT-DEEIRACEPYLNAEIRMINPEIIIPI 166 Query: 194 GNKTKNFFFNNDAQKTYQNL--GKWSNLCTPHSIIPTLAT 231 G T + + + + + Sbjct: 167 GETTLRELAIDYTTRRPDSFDIAEEHATTIRGRGFELVPM 206 >gi|94968592|ref|YP_590640.1| uracil-DNA glycosylase superfamily protein [Candidatus Koribacter versatilis Ellin345] gi|94550642|gb|ABF40566.1| Uracil-DNA glycosylase superfamily [Candidatus Koribacter versatilis Ellin345] Length = 228 Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 32/199 (16%), Positives = 61/199 (30%), Gaps = 42/199 (21%) Query: 77 LHELKSLLRSFHDCH-LCSTSLS-----------------TICATQTEGQDLMIIGYTPS 118 L L + C L + E ++I+G P Sbjct: 5 LSVLNHEVIGCRLCPRLVEYREQIGVEKRKAYREQEYWAKPVAGFGDEKARVLILGLAPG 64 Query: 119 DSD-NISGKPFSGKT-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGN 163 N +G+PF+G G+ + +L +I+ PP N Sbjct: 65 AHGSNRTGRPFTGDKSGDFMYPILHKTGFASQPTAVNREDGLKLLDCYITAAVRCAPPDN 124 Query: 164 RNLSNIEMEICRPIIMRQIELISP-KILLFIGNKTKNFFFNNDAQKTYQNL------GKW 216 E+ C P + R+I + K+++ +G + + + + + G Sbjct: 125 -KPLPQEIANCAPYLDREIAALDAVKVVVALGKIGFDAYLAHLQRAGFSFRKAEYGFGHL 183 Query: 217 SNLCTPHSIIPTLATVHPQ 235 + P+ I L + HP Sbjct: 184 AEYKMPN-GIVLLGSYHPS 201 >gi|83644737|ref|YP_433172.1| Uracil-DNA glycosylase [Hahella chejuensis KCTC 2396] gi|83632780|gb|ABC28747.1| Uracil-DNA glycosylase [Hahella chejuensis KCTC 2396] Length = 221 Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 60/165 (36%), Gaps = 13/165 (7%) Query: 78 HELKSLLRSFHDCHLCST--SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 +EL LL+ C LC + I + LMIIG P + +G P++ +G+ Sbjct: 28 NELSRLLQDVRACRLCEQHLEPNPIVKAGST-ARLMIIGQAPGTRVHATGIPWNDPSGDR 86 Query: 136 LDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK--IL 190 L L + +I I + +P R+ + C +I P+ + Sbjct: 87 LRAWLGLDKETFYDTRRIAIMPMGFCYPGKGRSGDLPPRKECYEHWHHKILARLPRLEVF 146 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 L +G + + N + +N+ W + + HP Sbjct: 147 LLVGLYAQQAYLPNAYKSLSENVKHWRDWYP-----RLIPLPHPS 186 >gi|119383981|ref|YP_915037.1| uracil-DNA glycosylase superfamily protein [Paracoccus denitrificans PD1222] gi|119373748|gb|ABL69341.1| Uracil-DNA glycosylase superfamily [Paracoccus denitrificans PD1222] Length = 220 Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 66/200 (33%), Gaps = 28/200 (14%) Query: 80 LKSLLRSFHDCHLCSTSLST-----ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L + + C S +T A G ++++G P +++G+PF+ ++GN Sbjct: 22 LLREISACRLCEQRFASTATGHSPRPVAWFRPGARILVVGQAPGMRVHLAGRPFADRSGN 81 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRN--LSNIEMEICRPIIMRQIELISPKI 189 L + + R++I I ++ P + R R + + P++ Sbjct: 82 RLRDWMGVSDAEFYDRSRIAIVPMAFCFPGYDAKGADLPPPPICARTWRERVMAELQPQL 141 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS--IIPTLATVHPQ-----ELIQYPL 242 L +G + + G + HP L + P Sbjct: 142 TLLVGGHAQRWHLG------AAARGGVTQTVADWRAHGPHIFPLPHPSWRNTGWLRRNPW 195 Query: 243 IKKNTWHALI-TLKKALKNL 261 + L+ L+ A+ L Sbjct: 196 FQA----DLLPELRAAVAAL 211 >gi|320450380|ref|YP_004202476.1| uracil-DNA glycosylase [Thermus scotoductus SA-01] gi|320150549|gb|ADW21927.1| uracil-DNA glycosylase [Thermus scotoductus SA-01] Length = 223 Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 31/219 (14%), Positives = 60/219 (27%), Gaps = 36/219 (16%) Query: 76 SLHELKSLLRSFHDCHL------------------CSTSLSTICATQTEGQDLMIIGYTP 117 S K L + C + + L++ G P Sbjct: 5 SWDAFKQELTACTRCPRLVAHREEVGRKKRRAFQDWTYWARPVPGFGDPQARLVLFGLAP 64 Query: 118 SDSD-NISGKPFSGK-TGNMLDKMLQSIE------------IMRTQIHISMISPWHPPGN 163 N +G+PF+G +G L +L + +++ PP N Sbjct: 65 GAHGSNRTGRPFTGDASGAFLYPLLYQAGLSSNPESEPHDDLRLYGTYLTAAVRCAPPEN 124 Query: 164 RNLSNIEMEICRPIIMRQIELIS-PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP 222 + E+ C ++ L+ ++ L +G ++ K + Sbjct: 125 -KPTREELLACSAWTRVELGLLREARVYLALGRIALEALLDHFGMKKSAHPFFHGAHYLL 183 Query: 223 HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 LA+ H Q + T + + K L Sbjct: 184 PDGRHLLASYHVS--RQNTQTGRLTREMFLEILLKAKGL 220 >gi|326773091|ref|ZP_08232375.1| uracil-DNA glycosylase family protein [Actinomyces viscosus C505] gi|326637723|gb|EGE38625.1| uracil-DNA glycosylase family protein [Actinomyces viscosus C505] Length = 278 Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 34/266 (12%), Positives = 69/266 (25%), Gaps = 50/266 (18%) Query: 42 KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL---- 97 + +A + L L + + C Sbjct: 15 PVPPGTGWPDDPATAATPVACSAADVARLAGASSDLSALDARITVCRACDRLVAWREEVA 74 Query: 98 ---------------STICATQTEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKML 140 + + +E + ++G P+ + N +G+ F+G ++G+ L Sbjct: 75 RTGRRASFAHEPYWGRPVASVGSEDARIYVVGLAPAANGANRTGRMFTGDRSGDWLWAAF 134 Query: 141 QS-------------IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE-LIS 186 T + PP + +E C P + R+I + Sbjct: 135 HRAGLAASPTSTAAGDGQRLTGARMGAAVRCAPP-ANKPTTVERATCAPWLAREIALMPE 193 Query: 187 PKILLFIGNKTKNFFFNND--------AQKTYQNLGKWSNL-CTPHSIIPTLATVHPQEL 237 K+LL +G + G + L + L + HP + Sbjct: 194 VKVLLALGGIGWGAVLRVTREAGWILPRPQPRFGHGATAELTRPDGRAVTLLGSYHPSQ- 252 Query: 238 IQYPLIKKNTW---HALITLKKALKN 260 Q + T ++ K L Sbjct: 253 -QNTFTGRLTEAMLDDVLEAAKRLAE 277 >gi|294628764|ref|ZP_06707324.1| uracil-DNA glycosylase, family 4 [Streptomyces sp. e14] gi|292832097|gb|EFF90446.1| uracil-DNA glycosylase, family 4 [Streptomyces sp. e14] Length = 257 Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 30/231 (12%), Positives = 69/231 (29%), Gaps = 42/231 (18%) Query: 63 LVQQADSIAQKACSLHELKSLLRSFHDCHL------------------CSTSLSTICATQ 104 + + ++ + SL L + C + + Sbjct: 19 AMGRGRAMDTDSGSLAALDGRISECRACPRLVEWREEVARTKRAAFADWTYWGRPVPGFG 78 Query: 105 TEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKML-------------QSIEIMRTQ 149 L+I+G P+ N +G+ F+G ++G++L + L + Sbjct: 79 PPDARLLIVGLAPAAHGANRTGRMFTGDRSGDVLYRALYDLGLASQPTAVSADDGLELHG 138 Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQ 207 + I+ PP + E + CR +++++ L+ P + ++ +G A Sbjct: 139 VRITSPVHCAPP-ANKPTPGERDTCRSWLVQELHLLRPTLRSVVVLGAFGWQAALPAFAA 197 Query: 208 K-TYQNLGKW---SNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 + P I H + + + T L + Sbjct: 198 AGWTVPRPRPAFAHGARVPLDGIDLFGCFHVSQ--RNTFTGRLTAEMLREV 246 >gi|227822274|ref|YP_002826245.1| uracil-DNA glycosylase [Sinorhizobium fredii NGR234] gi|227341274|gb|ACP25492.1| uracil-DNA glycosylase [Sinorhizobium fredii NGR234] Length = 319 Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 34/199 (17%), Positives = 68/199 (34%), Gaps = 18/199 (9%) Query: 66 QADSIAQKACSLHELKSLLRSFHDCHLCSTS--LSTICATQTE------GQDLMIIGYTP 117 + S+ L EL++ + + C + ++I G P Sbjct: 105 RRSSVPSADERLWELRAAIAACRLCRDDPARGETHRLPHEPRPVAVLSATARILIAGQAP 164 Query: 118 SDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSN-IEMEI 173 + SG PF+ +G+ L + L + I + P +R+ S+ Sbjct: 165 GLRVHESGLPFNDASGDRLRQWLAVDRDTFYDPRNFAIVPMGFCFPGYDRHGSDLPPRAE 224 Query: 174 CRPIIMRQIELISPKI--LLFIGNKTKNFFFNND-AQKTYQNLGKWSNLCTPHSIIPTLA 230 C P+ R++ + P+I L +G+ + + D + + W ++ L Sbjct: 225 CAPLWRRRVIDVMPQIELTLAVGHYAQRWHIGADCPKSMTDTVRNWERYVKRNTGPAVLP 284 Query: 231 TVHPQELIQYPLI-KKNTW 248 HP + +KN W Sbjct: 285 MPHPSW--RNTGWLRKNPW 301 >gi|312139006|ref|YP_004006342.1| uracil DNA glycosylase [Rhodococcus equi 103S] gi|311888345|emb|CBH47657.1| uracil DNA glycosylase [Rhodococcus equi 103S] Length = 293 Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 28/240 (11%), Positives = 63/240 (26%), Gaps = 45/240 (18%) Query: 40 QRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL-- 97 + + + ++A A +L ++ + + C Sbjct: 19 PSPVPPGTGWPGDPADEQTPVAHSAADVVALAADAKNLLDIDARISVCRACPRLVEWRER 78 Query: 98 ----------------STICATQTEGQDLMIIGYTPSDS-DNISGKPFSGK-TGNMLDKM 139 + + L+IIG P+ + N +G+ F+G G+ L + Sbjct: 79 AAETKRASFANQPYWGRPVTGFGGDFAKLLIIGLAPAANGGNRTGRMFTGDQAGDWLFRA 138 Query: 140 LQS-------------IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186 L + + PP N S E + C + + + Sbjct: 139 LHRAGLATRAEVDHAGDGQKLFGVRMLSAVRCAPPEN-KPSIEERDCCAGWLDAEFARLL 197 Query: 187 P--KILLFIGNKTKNFFFN--------NDAQKTYQNLGKWSN-LCTPHSIIPTLATVHPQ 235 P + ++ +G + K G+ + + + HP Sbjct: 198 PFARAVVALGAFGWDATLGAVRRSGGTVPTPKPKFGHGQIAVLHTADGKPLNVIGCYHPS 257 >gi|108797007|ref|YP_637204.1| uracil-DNA glycosylase superfamily protein [Mycobacterium sp. MCS] gi|119866091|ref|YP_936043.1| uracil-DNA glycosylase superfamily protein [Mycobacterium sp. KMS] gi|108767426|gb|ABG06148.1| Uracil-DNA glycosylase superfamily [Mycobacterium sp. MCS] gi|119692180|gb|ABL89253.1| Uracil-DNA glycosylase superfamily [Mycobacterium sp. KMS] Length = 222 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 65/164 (39%), Gaps = 4/164 (2%) Query: 80 LKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 L +RS C ++I+G + + +PF +G++L+ Sbjct: 18 LDDEIRSCSRCAGMNEEGVTQAAPGWGNLYSPVVIVGQSLCEQCMKPQEPFFEGSGSLLN 77 Query: 138 KMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197 + L+ + + IS + HPP NR E+ C + R++EL+ P++++ +G Sbjct: 78 EGLRLAGRAKGETFISNVVHCHPPKNRGSREHEIVNCSSYLHRELELVRPRLVIALGVDA 137 Query: 198 KNFF-FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 K F + + + S+ P S A HP + + Sbjct: 138 KRVLSFFYPSARVSPWPFRASSGRQPRSPYLLFAK-HPAWIKRQ 180 >gi|114562086|ref|YP_749599.1| uracil-DNA glycosylase superfamily protein [Shewanella frigidimarina NCIMB 400] gi|114333379|gb|ABI70761.1| Uracil-DNA glycosylase superfamily [Shewanella frigidimarina NCIMB 400] Length = 206 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 73/207 (35%), Gaps = 28/207 (13%) Query: 73 KACSLHELKSLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 KA + L + +++ C C + + ++IIG P ++SG PF Sbjct: 8 KALDMVSLLTQVKNCQLCASCLVDGVRPVV-QIDPQAKVLIIGQAPGRKVHLSGIPFDDA 66 Query: 132 TGNMLDKML---QSIEIMRTQIHISMISPWHP----------PGNRNLSNIEMEICRPII 178 +G+ L L + + QI I + +P G+ ++ Sbjct: 67 SGDRLRLWLGVTKDVFYDAKQIAIMPMGFCYPGSYAASGKGKSGDLPPRPECAPKWHDLL 126 Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ--- 235 ++Q+ + K++L +G + ++ + + + + +W + HP Sbjct: 127 LQQLV--NVKLILLVGQYAQQYYLADKPKTLTETVQQWRRF-----GPRYIPLPHPSPRN 179 Query: 236 --ELIQYPLIKKNTWHAL-ITLKKALK 259 L + P + + + + AL Sbjct: 180 NIWLSRNPWFEDELLSDISLRVANALA 206 >gi|149928378|ref|ZP_01916618.1| Uracil-DNA glycosylase superfamily protein [Limnobacter sp. MED105] gi|149822913|gb|EDM82159.1| Uracil-DNA glycosylase superfamily protein [Limnobacter sp. MED105] Length = 225 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 52/176 (29%), Gaps = 31/176 (17%) Query: 86 SFHDCHLC-----STSLS-------TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK- 131 DC + E +L+I+G P N SG+PF+G Sbjct: 24 HCTDCPRLHAFHEQNRQKFPAHFNGPVPPFGPENAELLIVGLAPGLHGANRSGRPFTGDY 83 Query: 132 TGNMLDKMLQSIEIMRTQIHIS-------------MISPWHPPGNRNLSNIEMEICRPII 178 G++L L + I+ PP N + E++ C I Sbjct: 84 CGDLLYSTLHKFGFANRPVSIAVGDGMQLLNARVSNAVKCVPPEN-KPTPAEIKTCNQFI 142 Query: 179 MRQIELISPKILLFIGNKTKNFFFN-NDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 + ++ PK +L +G D +++ G + H Sbjct: 143 AHEFKVHPPKAVLALGLVGHQAVLKAMDQKQSAFKFG--HAAQHDLGAFRLFDSYH 196 >gi|284163386|ref|YP_003401665.1| uracil-DNA glycosylase superfamily [Haloterrigena turkmenica DSM 5511] gi|284013041|gb|ADB58992.1| Uracil-DNA glycosylase superfamily [Haloterrigena turkmenica DSM 5511] Length = 226 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 35/230 (15%), Positives = 68/230 (29%), Gaps = 41/230 (17%) Query: 59 IHSPLVQQADSIAQKACSLHELKSLLRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTP 117 SP AD ++ E C L T ++++G P Sbjct: 5 SPSPSDTNADPAYPTERNVIEP-----GCERCPALAEHRECISWGTGPLEASVLVVGEAP 59 Query: 118 S----DSDNISGKPFSGK------TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRN-- 165 D+D G ++GK +G + +ML+ + + + P + Sbjct: 60 GPGNPDADRWKGGNWTGKAYTSRHSGRRIRRMLERVGYG-DDAYYTNAVKCFPADPADPT 118 Query: 166 ----LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN-LC 220 + E CR ++ +IE + P ++L G + + + Sbjct: 119 SNREPTPEERTNCRGHLLTEIETVDPDVVLATGKHATTSVLAAEDHTLEGFIDAVLEPVD 178 Query: 221 TPHSIIPTLATVHPQELIQYPLIKKNTW---------HALITLKKALKNL 261 L +HP ++ W L + +AL+ L Sbjct: 179 CERLETTLLPILHPSY--------QDVWIGRLGYEPDEYLAAIGEALEEL 220 >gi|167566785|ref|ZP_02359701.1| uracil-DNA glycosylase [Burkholderia oklahomensis EO147] Length = 224 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 73/217 (33%), Gaps = 21/217 (9%) Query: 57 RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIG 114 R+ P+ A + + SL L +R+ C HL + A ++I+G Sbjct: 5 RNDSPPIRAAARTTPTRRASLDALLREIRACTVCAPHLPCGPRPVVRA--HPHARILIVG 62 Query: 115 YTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEM 171 P + SG P+ +G L + L + + I + +P + N Sbjct: 63 QAPGARVHASGIPWDDASGKRLREWLNVDDAKFYDESLFAIVPMGFCYPGRGASGDNPPR 122 Query: 172 EICRPIIMRQIELISP--KILLFIGNKTKNFFFN-NDAQKTYQNLGKWSNLCTPHSIIPT 228 C P+ + ++ P ++ L IG + F + + W+ Sbjct: 123 PECAPLWLDRLLSELPDIRLTLLIGQYAQRRFLGARRKPSVTETVRAWAEYAPEF----- 177 Query: 229 LATVHPQELIQYPLI-KKNTWHA---LITLKKALKNL 261 + HP + K++ W L L+ + L Sbjct: 178 IPLPHPSP--RNQGWLKRHPWFDADVLPALRGNVAEL 212 >gi|313126025|ref|YP_004036295.1| uracil-DNA glycosylase [Halogeometricum borinquense DSM 11551] gi|312292390|gb|ADQ66850.1| uracil-DNA glycosylase [Halogeometricum borinquense DSM 11551] Length = 211 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 57/161 (35%), Gaps = 15/161 (9%) Query: 86 SFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT-GNMLDKMLQSI 143 +C LC + + G + + IG P + +G PF+G G L ++L + Sbjct: 17 DCENCSGLCDVRENVVHGYGDVGGEFLFIGEQPRGGADETGVPFTGDPAGERLQRILGDL 76 Query: 144 EIMR----------TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 R + ++ ++ P E+ C P + ++ +I+P+IL+ I Sbjct: 77 GFSRSRPDSDEPDLQNVFLTYLTRCRHPER-RPDEEEILTCEPYLNAEVRMINPEILVPI 135 Query: 194 GNKTKNFFFNNDAQKTYQNL--GKWSNLCTPHSIIPTLATV 232 G +T + + + + + + Sbjct: 136 GQRTLESLAIDYTTRAPDSFDIEEAHATTIRGRGFELVPML 176 >gi|121606732|ref|YP_984061.1| phage SPO1 DNA polymerase-like protein [Polaromonas naphthalenivorans CJ2] gi|120595701|gb|ABM39140.1| phage SPO1 DNA polymerase-related protein [Polaromonas naphthalenivorans CJ2] Length = 266 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 48/149 (32%), Gaps = 12/149 (8%) Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL 166 G +++ +P + F G G +LD ML++ + R + Sbjct: 123 GARWLVLAQSPPA--ALQAPVFEGDAGRLLDNMLRAARLDRDAGAVLFAPLVRQ-----A 175 Query: 167 SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII 226 + M+ ++ +E P ++L +G + + GK Sbjct: 176 VSGAMDELAAALLALVEQARPDVVLVMGRLAAQALLQS-----SEPFGKLRGRPHALHGR 230 Query: 227 PTLATVHPQELIQYPLIKKNTWHALITLK 255 PT+ T L++ P K W L Sbjct: 231 PTVVTHDAPYLLRCPQDKAKAWDDLCLAM 259 >gi|149919098|ref|ZP_01907582.1| Uracil-DNA glycosylase superfamily protein [Plesiocystis pacifica SIR-1] gi|149820028|gb|EDM79449.1| Uracil-DNA glycosylase superfamily protein [Plesiocystis pacifica SIR-1] Length = 231 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 32/228 (14%), Positives = 70/228 (30%), Gaps = 42/228 (18%) Query: 73 KACSLHELKSLLRSFHDCHLCSTSLS--------------------TICATQTEGQDLMI 112 ++ SL L+ L C + ++I Sbjct: 4 RSKSLVTLERKLIRCRACERLVDWREEVAEVKRAAYRDEDYWGRPVPVPGFGDPRARVLI 63 Query: 113 IGYTPSDSD-NISGKPFSG-KTGNMLDKMLQSIEIMRTQI-------------HISMISP 157 +G P+ N +G+ F+G ++G+ L + + ++ + Sbjct: 64 VGLAPAAHGANRTGRMFTGDRSGDWLYRAMHETGFANQASSVARGDGLALTGAFVTSVVK 123 Query: 158 WHPPGNRNLSNIEMEICRPIIMRQIELISP-KILLFIGNKTKNFFFNNDAQKTYQNLGKW 216 PP + E + C P ++ L+ ++L+ +G + A K ++ K Sbjct: 124 CAPP-ANKPTTAERDACMPWAHEELRLLDAVRVLVALGGFGWDGALRLLAAKGHRVKPKP 182 Query: 217 ---SNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 L + HP + Q K+ T + + + + L Sbjct: 183 KFGHGAEAQVGPYVLLGSYHPSQ--QNTFTKRLTRPMIRGVFERAREL 228 >gi|312602362|ref|YP_004022207.1| uracil DNA glycosylase superfamily protein [Burkholderia rhizoxinica HKI 454] gi|312169676|emb|CBW76688.1| Uracil DNA glycosylase superfamily protein [Burkholderia rhizoxinica HKI 454] Length = 206 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 37/199 (18%), Positives = 75/199 (37%), Gaps = 21/199 (10%) Query: 75 CSLHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 SL L +R+ C L + + + A + L+I+G P + SG P+S + Sbjct: 11 ASLDTLLRDVRACRVCDTQLPAGARPVVRA--SRDARLLIVGQAPGAKVHASGVPWSDAS 68 Query: 133 GNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189 G L L ++ +++ I + +P + N C + + Q+ P++ Sbjct: 69 GKRLRDWLDMTEAEFYDTSRVAIIPMGFCYPGRGASGDNPPRPECAQLWLEQLLSHLPRV 128 Query: 190 --LLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KK 245 L +G + F + + + + W+ + + HP + L K+ Sbjct: 129 ELTLLVGQYAQRHFLGARRKSSLTETVRAWAEYTPTY-----VPLPHPSP--RNQLWFKR 181 Query: 246 NTW---HALITLKKALKNL 261 + W L LK+ + L Sbjct: 182 HPWFGDQVLPMLKQRIAAL 200 >gi|256374831|ref|YP_003098491.1| uracil-DNA glycosylase [Actinosynnema mirum DSM 43827] gi|255919134|gb|ACU34645.1| Uracil-DNA glycosylase superfamily [Actinosynnema mirum DSM 43827] Length = 276 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 29/206 (14%), Positives = 56/206 (27%), Gaps = 45/206 (21%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLMII 113 L EL + C + L ++ Sbjct: 43 AAVPDLPELDRRVSGCRACPRLVAWREEVARVKRAAFRDQDYWGRPVPGFGGGDARLAVV 102 Query: 114 GYTPSDS-DNISGKPFSGK-TGNMLDKMLQSIEIMRTQI-------------HISMISPW 158 G P+ N +G+ F+G +G +L + ++ + I+ Sbjct: 103 GLAPAAHGGNRTGRMFTGDASGEVLYAAMHAVGLANQPEAVSRDDGLRLLGARITAPVKC 162 Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQKTYQNLGKW 216 PP N + E + CRP + R++ L+ P + ++ +G A + Sbjct: 163 APPDN-APTPAERDTCRPWLERELTLLRPTLRAVVVLGGFGWQSLLPALAAHWTVPRPRP 221 Query: 217 S-------NLCTPHSIIPTL--ATVH 233 L P + H Sbjct: 222 RFTHGARVELPASDDGPPLVLHGCYH 247 >gi|206603221|gb|EDZ39701.1| Putative uracil-DNA glycosylase [Leptospirillum sp. Group II '5-way CG'] Length = 237 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 69/233 (29%), Gaps = 43/233 (18%) Query: 68 DSIAQKACSLHELKSLLRSFHDCHL-------------CSTSLST-----ICATQTEGQD 109 + +A + SL L + C ST T + Sbjct: 2 EEVAVEEDSLGRLSGEIVVCRQCDRLVSWREESGRVKRASTRTETYWSRPLPGFGDSEAL 61 Query: 110 LMIIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQSIEIMRTQI-------------HISM 154 L IIG P+ N +G+ F+G ++G+ L + L R IS Sbjct: 62 LWIIGLAPAAHGGNRTGRVFTGDRSGDFLFRCLYETGWSRYPTVWGRKDGQTLFGAWISA 121 Query: 155 ISPWHPPGNRNLSNIEMEICRPIIMRQIEL-ISPKILLFIGNKTKN---FFFNNDAQKTY 210 PP N S E CRP + R+ + +L +G Sbjct: 122 AVRCAPPENT-PSPEEFLRCRPFLEREFRQLTKVRAVLVLGALALREWMTLLGKHDPSLL 180 Query: 211 QNLGKW---SNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 Q + +++ P + HP + + T + L + ++ Sbjct: 181 QKKPSFVHGTHMVFPDPTPRLFISYHPSQ--RNTQTGLLTKEMMCRLLREIRA 231 >gi|297198949|ref|ZP_06916346.1| uracil-DNA glycosylase [Streptomyces sviceus ATCC 29083] gi|197711125|gb|EDY55159.1| uracil-DNA glycosylase [Streptomyces sviceus ATCC 29083] Length = 243 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 29/223 (13%), Positives = 66/223 (29%), Gaps = 42/223 (18%) Query: 77 LHELKSLLRSFHDCHL------------------CSTSLSTICATQTEGQDLMIIGYTPS 118 L +L + C + + ++I+G P+ Sbjct: 4 LADLDRRISGCRACPRLVDWREEVARTKRAAFADWTYWGRPVPGFGPADARMLIVGLAPA 63 Query: 119 DS-DNISGKPFSG-KTGNMLDKML-------------QSIEIMRTQIHISMISPWHPPGN 163 N +G+ F+G ++G++L + L + + I+ PP Sbjct: 64 AHGGNRTGRMFTGDRSGDVLYQALYDIGLASQSTAVTADDGLELHGVRITSPVHCAPP-A 122 Query: 164 RNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFF-NNDAQKTYQNLGKW---S 217 + E + CRP +++++ L+ P + ++ +G A + Sbjct: 123 NKPTPGERDTCRPWLVQELNLLRPTLRTVVVLGAFGWQAALPAFTAAGWSVPRPRPAFGH 182 Query: 218 NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 P + H + + K T L + + Sbjct: 183 GARVPLDGLELFGCFHVSQ--RNTFTGKLTPEMLRDVLRTAAE 223 >gi|46199090|ref|YP_004757.1| uracil-DNA glycosylase [Thermus thermophilus HB27] gi|55981118|ref|YP_144415.1| uracil-DNA glycosylase [Thermus thermophilus HB8] gi|118137482|pdb|2D3Y|A Chain A, Crystal Structure Of Uracil-Dna Glycosylase From Thermus Thermophilus Hb8 gi|134104100|pdb|2DDG|A Chain A, Crystal Structure Of Uracil-Dna Glycosylase In Complex With Ap:g Containing Dna gi|146386734|pdb|2DEM|A Chain A, Crystal Structure Of Uracil-Dna Glycosylase In Complex With Ap:a Containing Dna gi|149241082|pdb|2DP6|A Chain A, Crystal Structure Of Uracil-Dna Glycosylase In Complex With Ap:c Containing Dna gi|21464614|emb|CAD29337.1| uracil-DNA glycosylase [Thermus thermophilus HB27] gi|46196714|gb|AAS81130.1| uracil-DNA glycosylase [Thermus thermophilus HB27] gi|55772531|dbj|BAD70972.1| uracil-DNA glycosylase [Thermus thermophilus HB8] Length = 219 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 28/210 (13%), Positives = 62/210 (29%), Gaps = 28/210 (13%) Query: 74 ACSLHELKSLL----RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD-NISGKPF 128 L + + R+F + + +++ G P N +G+PF Sbjct: 16 CPRLVAWREEVVGRKRAFRGEPYWA---RPVPGFGDPEARILLFGLAPGAHGSNRTGRPF 72 Query: 129 SGK-TGNMLDKMLQSIE------------IMRTQIHISMISPWHPPGNRNLSNIEMEICR 175 +G +G L +L + ++++ PP N + E+ C Sbjct: 73 TGDASGAFLYPLLHEAGLSSKPESLPGDDLRLYGVYLTAAVRCAPPKN-KPTPEELRACA 131 Query: 176 PIIMRQIE-LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHP 234 ++ L ++ + +G + + + + LA+ H Sbjct: 132 RWTEVELGLLPEVRVYVALGRIALEALLAHFGLRKSAHPFRHGAHYPLPGGRHLLASYHV 191 Query: 235 QELIQYPLIKKNTWHALITL---KKALKNL 261 Q + T + + K L L Sbjct: 192 S--RQNTQTGRLTREMFLEVLMEAKRLAGL 219 >gi|91762006|ref|ZP_01263971.1| uracil-DNA glycosylase [Candidatus Pelagibacter ubique HTCC1002] gi|91717808|gb|EAS84458.1| uracil-DNA glycosylase [Candidatus Pelagibacter ubique HTCC1002] Length = 224 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 26/205 (12%), Positives = 57/205 (27%), Gaps = 40/205 (19%) Query: 77 LHELKSLLRSFHDCHL-------------CSTSL-----STICATQTEGQDLMIIGYTPS 118 +L + + C + L+I+G P+ Sbjct: 5 FKKLNNSIVKCKSCPRLIAFSKKISIEKRKQNMKDTYWAKPVTGFGDIKAKLLIVGLAPA 64 Query: 119 DS-DNISGKPFSGKT-GNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGN 163 +G+ F+G G+ L L + + +I+ I PP + Sbjct: 65 AHGGTRTGRAFTGDKSGDFLFNCLFKANISNISTSKHIDDGLKLNKTYITNILKCVPPED 124 Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS----NL 219 + L N L + K+++ +G + + + + + Sbjct: 125 KPLKNELSNCSTFFKNELTLLKNLKVIIALGKVSFDNCIEFYKKNYHFDKKLIFIHGVKY 184 Query: 220 CTPHSIIPTLATVHPQELIQYPLIK 244 P + I + + HP + K Sbjct: 185 LLPDNKI-LIPSYHPSP--RNVNRK 206 >gi|325003192|ref|ZP_08124304.1| hypothetical protein PseP1_30695 [Pseudonocardia sp. P1] Length = 244 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 27/200 (13%), Positives = 57/200 (28%), Gaps = 43/200 (21%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLMII 113 L L + C + ++I+ Sbjct: 4 DLPGPLDLLDRDISECRACPRLVEWRERVAVEKRAAFRDQTYWGRPVPGFGPPDARMLIV 63 Query: 114 GYTPSDSD-NISGKPFSG-KTGNMLDKMLQS-------------IEIMRTQIHISMISPW 158 G P+ N +G+ F+G ++G++L L + + + I+ Sbjct: 64 GLAPAAHGANRTGRMFTGDRSGDVLYAGLHAVGLASQPTATHIGDGLELYGVRITAPVHC 123 Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNN-DAQKTYQNLGK 215 PP + E + CR + R+++L++P + ++ +G Sbjct: 124 APP-ANKPTPAERDTCRGWLERELDLLAPTVRSIMVLGGFGWQALLPVLAGAGWTVPR-- 180 Query: 216 WSNLCTPHSIIPTLATVHPQ 235 P T+HP Sbjct: 181 ----PAPRFGHGASVTLHPA 196 >gi|302035873|ref|YP_003796195.1| putative uracil-DNA glycosylase [Candidatus Nitrospira defluvii] gi|300603937|emb|CBK40269.1| putative Uracil-DNA glycosylase [Candidatus Nitrospira defluvii] Length = 232 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 29/199 (14%), Positives = 59/199 (29%), Gaps = 42/199 (21%) Query: 77 LHELKSLLRSFHDCHL------------------CSTSLSTICATQTEGQDLMIIGYTPS 118 L L + + + C S + L ++G P+ Sbjct: 4 LSILNNDIVACTRCPRLVAYREAVARDKRRQFRDWSYWGKPVPGFGDPNAKLYVLGLAPA 63 Query: 119 DS-DNISGKPFSG-KTGNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGN 163 N +G+ F+G ++G+ L + L T +I PP Sbjct: 64 AHGGNRTGRVFTGDRSGDWLYEALHRFGFANQATSIHAGDGLTLTDCYIGATVRCAPP-A 122 Query: 164 RNLSNIEMEICRPIIMRQIELISP-KILLFIGNKT------KNFFFNNDAQKTYQNLGKW 216 + E CRP ++R++ L+ ++++ +G + G Sbjct: 123 NKPTPDEFTACRPFVLRELRLLKRMRVVVTLGKIAFDHYLKASRELGLAPPSPLPLFGHE 182 Query: 217 SNLCTPHSIIPTLATVHPQ 235 P + + + HP Sbjct: 183 VVYDLPW-GVTLVGSYHPS 200 >gi|91228706|ref|ZP_01262619.1| hypothetical protein V12G01_00045 [Vibrio alginolyticus 12G01] gi|269965865|ref|ZP_06179959.1| conserved hypothetical protein [Vibrio alginolyticus 40B] gi|91187732|gb|EAS74051.1| hypothetical protein V12G01_00045 [Vibrio alginolyticus 12G01] gi|269829529|gb|EEZ83769.1| conserved hypothetical protein [Vibrio alginolyticus 40B] Length = 190 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 72/181 (39%), Gaps = 17/181 (9%) Query: 76 SLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 SL EL +R+ C +L + + A +G ++IIG P + + P++ +G Sbjct: 2 SLDELLQQVRACQICADNLPLGANPVVQA--AKGARILIIGQAPGTRVHKTSIPWNDPSG 59 Query: 134 NMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--K 188 + L + L + +I I + +P + + C P ++I P + Sbjct: 60 DRLRQWLDIDKDVFYDPNKIAIVPMGFCYPGKGNSGDLPPRKECAPTWHKKILEQLPNIE 119 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247 + L IG ++ ++ N + Q + +W + + HP + L KKN Sbjct: 120 LTLLIGQYSQQYYLTNKPKTLTQTVQQWQDWEPDF-----IPLPHPSP--RNTLWLKKNP 172 Query: 248 W 248 W Sbjct: 173 W 173 >gi|300789996|ref|YP_003770287.1| uracil-DNA glycosylase [Amycolatopsis mediterranei U32] gi|299799510|gb|ADJ49885.1| uracil-DNA glycosylase [Amycolatopsis mediterranei U32] Length = 227 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 28/197 (14%), Positives = 53/197 (26%), Gaps = 39/197 (19%) Query: 75 CSLHELKSLLRSFHDCHLCSTSL-----------------STICATQTEGQDLMIIGYTP 117 SL EL + + C + L ++G P Sbjct: 2 RSLSELDTAVAGCRACPRLVAWREGVAGTKAAFRGEEYWARPVPGFGPPDASLAVVGLAP 61 Query: 118 SDSD-NISGKPFSGKT-GNMLDKMLQS-------------IEIMRTQIHISMISPWHPPG 162 S N +G+ F+G G+ L ++L + + PP Sbjct: 62 SAHGANRTGRMFTGDPSGDFLFRVLHEVGLASQPTSERLGDGLQLYGTRLVSPVRCAPPE 121 Query: 163 NRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFN---NDAQKTYQNLGKW- 216 N + E + CRP + ++ L+ P + ++ +G Q + Sbjct: 122 N-KPTPAERDTCRPWLAGELALLRPTLRAIVVLGAFGWQALLPVLEAAGWPVPQPRPAFA 180 Query: 217 SNLCTPHSIIPTLATVH 233 + H Sbjct: 181 HGAVVELGDLRLFGCYH 197 >gi|257057186|ref|YP_003135018.1| uracil-DNA glycosylase [Saccharomonospora viridis DSM 43017] gi|256587058|gb|ACU98191.1| uracil-DNA glycosylase [Saccharomonospora viridis DSM 43017] Length = 235 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 28/201 (13%), Positives = 60/201 (29%), Gaps = 43/201 (21%) Query: 75 CSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLMIIGYT 116 SL +L + + C + + L+I+G Sbjct: 6 KSLAQLDAAVSKCRACPRLVRWREQVARTKRAAYADQTYWGRPVPGFGPDDASLVIVGLA 65 Query: 117 PSDS-DNISGKPFSG-KTGNMLDKML-------------QSIEIMRTQIHISMISPWHPP 161 P+ N +G+ F+G ++G++L + L + + I+ PP Sbjct: 66 PAAHGGNRTGRMFTGDRSGDVLFRALYDVGLASQPTSVHRDDGLTLRGTRITAPVHCAPP 125 Query: 162 GNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFF------NNDAQKTYQNL 213 + E + CR + ++ L+ P K ++ +G + Sbjct: 126 -ANKPTPAERDTCRHWLADELTLLRPTLKAIVVLGAFGWQALLPVLAEAGWRVPRPKPRF 184 Query: 214 GK-WSNLCTPHSIIPTLATVH 233 G + + L + H Sbjct: 185 GHGVRITLDGPTPLHVLGSYH 205 >gi|71083573|ref|YP_266292.1| uracil-DNA glycosylase [Candidatus Pelagibacter ubique HTCC1062] gi|71062686|gb|AAZ21689.1| uracil-DNA glycosylase [Candidatus Pelagibacter ubique HTCC1062] Length = 224 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 27/205 (13%), Positives = 59/205 (28%), Gaps = 40/205 (19%) Query: 77 LHELKSLLRSFHDCHL-------------CSTSL-----STICATQTEGQDLMIIGYTPS 118 +L + + C + L+I+G P+ Sbjct: 5 FKKLNNSIVKCKSCPRLIEFSKKISVKKRKQNMKETYWAKPVTGFGDINAKLLIVGLAPA 64 Query: 119 DS-DNISGKPFSGKT-GNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGN 163 +G+ F+G G+ L L + + +I+ I PP + Sbjct: 65 AHGGTRTGRAFTGDKSGDFLFNCLFKANISNRSTSTHIDDGLKLNKTYITNILKCVPPED 124 Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS----NL 219 + L N + I L + K+++ +G + + + + + Sbjct: 125 KPLKNELINCSTFFKNELILLKNLKVIIALGKVSFDNCIEFYKKNYHFDKKLIFIHGVKY 184 Query: 220 CTPHSIIPTLATVHPQELIQYPLIK 244 P + I + + HP + K Sbjct: 185 LLPDNKI-LIPSYHPSP--RNVNRK 206 >gi|300709426|ref|YP_003735240.1| Uracil-DNA glycosylase superfamily protein [Halalkalicoccus jeotgali B3] gi|299123109|gb|ADJ13448.1| Uracil-DNA glycosylase superfamily protein [Halalkalicoccus jeotgali B3] Length = 291 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 26/184 (14%), Positives = 57/184 (30%), Gaps = 35/184 (19%) Query: 86 SFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPS----DSDNISGKPFSGK------TGN 134 + C L T T ++++G P ++D G ++G +G Sbjct: 80 NCTRCPHLAETRECISWGTGPLDSPVLVVGEAPGSGAPEADLWKGGNWTGMAYTARHSGR 139 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPG---------------------NRNLSNIEMEI 173 ++ +++S+ + + PP NR ++ E+ Sbjct: 140 VIRDLMESVGYH--DAYYTNAVKCFPPDVPASEASGSSSEPGSDGGKVSNREPTDEELAT 197 Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNND-AQKTYQNLGKWSNLCTPHSIIPTLATV 232 CR ++ ++E + P ++ G D + + P L + Sbjct: 198 CRTHLVTEVEEVEPDAIVPTGKHATETLLTLDEKSLDGFTDHVLTPIDCEALSTPLLPVL 257 Query: 233 HPQE 236 HP Sbjct: 258 HPSY 261 >gi|83945627|ref|ZP_00957973.1| Uracil-DNA glycosylase [Oceanicaulis alexandrii HTCC2633] gi|83850993|gb|EAP88852.1| Uracil-DNA glycosylase [Oceanicaulis alexandrii HTCC2633] Length = 198 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 68/204 (33%), Gaps = 24/204 (11%) Query: 74 ACSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 A S +LK +R+ C HL + + IIG P SGKPF+ Sbjct: 2 AESFDQLKREIRACRVCQPHLGHPVRPVV--RGEASARIRIIGQAPGTRVQASGKPFTDP 59 Query: 132 TGNMLDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIEL 184 +G+ L + + I I+ + P G E L Sbjct: 60 SGDRLRDWMGVSEDAFYDERAIAITPMGFCFPGLDAKGGDKPPRREC-APLWQDRASRAL 118 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQ-----ELI 238 + + L +G + + A KT + + +W + +P HP L Sbjct: 119 PNVGLTLLVGAHAQRWHLGTQAAKTLTETVKQWRLHLPDYVALP-----HPSWRNTGWLK 173 Query: 239 QYPLIKKNTWHALIT-LKKALKNL 261 + P ++ L +++ L +L Sbjct: 174 RNPWFEQEVLPELKARVREMLNSL 197 >gi|221069959|ref|ZP_03546064.1| phage SPO1 DNA polymerase-related protein [Comamonas testosteroni KF-1] gi|220714982|gb|EED70350.1| phage SPO1 DNA polymerase-related protein [Comamonas testosteroni KF-1] Length = 303 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 48/140 (34%), Gaps = 8/140 (5%) Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEM 171 ++ + + + G +LD ML+++ + S PP + Sbjct: 162 LLSPAQRPAADCAQTALQGDAARLLDNMLRALGLQEKPRVFSAALHRAPPDADLSHAQAL 221 Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231 + ++R++ P +L +G + LG+ + +PT+ T Sbjct: 222 QPALETLLREL---RPDCVLVLGLASARAVLGRH-----DALGRLRAEPHHIAGVPTVVT 273 Query: 232 VHPQELIQYPLIKKNTWHAL 251 P L++ P K W L Sbjct: 274 YDPNYLLRAPQAKAGAWADL 293 >gi|108760152|ref|YP_631779.1| uracil-DNA glycosylase family protein [Myxococcus xanthus DK 1622] gi|108464032|gb|ABF89217.1| putative uracil-DNA glycosylase, family 4 [Myxococcus xanthus DK 1622] Length = 235 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 56/196 (28%), Gaps = 41/196 (20%) Query: 77 LHELKSLLRSFHDCHL------------------CSTSLSTICATQTEGQDLMIIGYTPS 118 L L + C + + L+I+G P+ Sbjct: 4 LESLHKEITDCRACPRLVEWREEVARVKRRAYRDWNYWGLPVPGFGDPKARLIIVGLAPA 63 Query: 119 DSD-NISGKPFSG-KTGNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGN 163 N +G+ F+G ++G+ L L + I + PP N Sbjct: 64 AHGANRTGRMFTGDRSGDFLYAGLHRAGFANQALSEHRDDGLRLKDAFIVSAARCAPPDN 123 Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF------NNDAQKTYQNLGKWS 217 E+ C P + R++ L+ +++L +G N + G + Sbjct: 124 -KPLPEELARCAPFLDRELALLPGRVMLALGAIGWNAALVALARQGMEVPSPRPAFGHGA 182 Query: 218 NLCTPHSIIPTLATVH 233 L P L H Sbjct: 183 ELRLPG-GRTLLGCYH 197 >gi|302550698|ref|ZP_07303040.1| uracil-DNA glycosylase [Streptomyces viridochromogenes DSM 40736] gi|302468316|gb|EFL31409.1| uracil-DNA glycosylase [Streptomyces viridochromogenes DSM 40736] Length = 247 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 27/213 (12%), Positives = 59/213 (27%), Gaps = 40/213 (18%) Query: 60 HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL------------------STIC 101 A A A L L + C + + Sbjct: 2 RGADPTAAYGGAMDASGLPLLDQRISDCRACPRLVSWREEVAREKRAAYADWTYWGRPVP 61 Query: 102 ATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKML-------------QSIEIM 146 L+I+G P+ N +G+ F+G ++G++L + L + Sbjct: 62 GFGPADARLLIVGLAPAAHGGNRTGRMFTGDRSGDVLYEALYDVGLASQPTAVHADDGLE 121 Query: 147 RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFF-N 203 + ++ PP + E + CRP +++++ L+ P + ++ +G Sbjct: 122 LYGVRVTSPVHCAPP-ANKPTPEERDACRPWLVQELRLLRPTLRAVVVLGAFGWQAALPA 180 Query: 204 NDAQKTYQNLGKW---SNLCTPHSIIPTLATVH 233 + + H Sbjct: 181 FTEAGWSVPRPRPAFAHGARFELDGLDLFGCFH 213 >gi|284047227|ref|YP_003397567.1| uracil-DNA glycosylase superfamily [Conexibacter woesei DSM 14684] gi|283951448|gb|ADB54192.1| Uracil-DNA glycosylase superfamily [Conexibacter woesei DSM 14684] Length = 233 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 28/199 (14%), Positives = 59/199 (29%), Gaps = 43/199 (21%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTI------------------CATQTEGQDLMIIGYTPS 118 L L + + C + + L+++G P+ Sbjct: 8 LAALTAEVVDCRRCPRLVSWREQVATEKRAAFADQEYWGRPAPGFGDPDARLLVLGLAPA 67 Query: 119 DSD-NISGKPFSG-KTGNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGN 163 N +G+ F+G ++G+ L L + +++ PP Sbjct: 68 AHGANRTGRVFTGDRSGDWLYAALWRCGMANQPTSVSRDDGLELHGAYVTAAVRCAPP-A 126 Query: 164 RNLSNIEMEICRPIIMRQIELIS-PKILLFIGNKTK------NFFFNNDAQKTYQNLGKW 216 E + C P ++R++EL+ + +L +G + A + G Sbjct: 127 NKPLPAERDTCFPYLVRELELLREVRAILCLGGFAWDAALRLRAALGDPAPRPKPRFG-- 184 Query: 217 SNLCTPHSIIPTLATVHPQ 235 P + + HP Sbjct: 185 HGAELPGARWALIGCYHPS 203 >gi|299529391|ref|ZP_07042829.1| hypothetical protein CTS44_01420 [Comamonas testosteroni S44] gi|298722640|gb|EFI63559.1| hypothetical protein CTS44_01420 [Comamonas testosteroni S44] Length = 299 Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 46/135 (34%), Gaps = 10/135 (7%) Query: 117 PSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP 176 P+ + G +LD ML+++ + S PP ++ Sbjct: 165 PAADSAQT--ALQGDAAKLLDNMLRALGLQEKPRVFSAALHRAPPDADLSHAQALQPALE 222 Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236 ++R++ P +L +G + LG+ + +PT+ T P Sbjct: 223 ALLREL---RPDCVLVLGLASARAVLGRH-----DALGRLRAEPHHIAGVPTVVTYDPNY 274 Query: 237 LIQYPLIKKNTWHAL 251 L++ P K W L Sbjct: 275 LLRAPQAKAGAWADL 289 >gi|328471090|gb|EGF41996.1| hypothetical protein VP10329_00110 [Vibrio parahaemolyticus 10329] Length = 190 Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 70/181 (38%), Gaps = 17/181 (9%) Query: 76 SLHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 SL L +R+ C L + + + + ++IIG P + + P++ +G Sbjct: 2 SLENLLQQVRACQICAESLPLGA-NPVVQAG-KNARILIIGQAPGTKVHSTSIPWNDPSG 59 Query: 134 NMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--K 188 + L + L + +I I + +P + + C PI ++I P + Sbjct: 60 DRLRQWLDIDKDVFYEPNKIAIVPMGFCYPGKGNSGDMPPRKECAPIWHKKILEQLPNIE 119 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247 + L IG ++ ++ N + Q + +W + + HP + L KKN Sbjct: 120 LTLLIGQYSQQYYLTNKPKTLTQTVQQWQDWEPEF-----IPLPHPSP--RNTLWLKKNP 172 Query: 248 W 248 W Sbjct: 173 W 173 >gi|264680721|ref|YP_003280631.1| hypothetical protein CtCNB1_4589 [Comamonas testosteroni CNB-2] gi|262211237|gb|ACY35335.1| hypothetical protein CtCNB1_4589 [Comamonas testosteroni CNB-2] Length = 301 Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 46/135 (34%), Gaps = 10/135 (7%) Query: 117 PSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP 176 P+ + G +LD ML+++ + S PP ++ Sbjct: 167 PAADSAQT--ALQGDAAKLLDNMLRALGLQEKPRVFSAALHRAPPDADLSHAQALQPALE 224 Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236 ++R++ P +L +G + LG+ + +PT+ T P Sbjct: 225 TLLREL---RPDCVLVLGLASARAVLGRH-----DALGRLRAEPHHIAGVPTVVTYDPNY 276 Query: 237 LIQYPLIKKNTWHAL 251 L++ P K W L Sbjct: 277 LLRAPQAKAGAWADL 291 >gi|254455448|ref|ZP_05068877.1| uracil-DNA glycosylase [Candidatus Pelagibacter sp. HTCC7211] gi|207082450|gb|EDZ59876.1| uracil-DNA glycosylase [Candidatus Pelagibacter sp. HTCC7211] Length = 226 Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 27/217 (12%), Positives = 57/217 (26%), Gaps = 50/217 (23%) Query: 84 LRSFHDCHL-----CSTSLS-------------TICATQTEGQDLMIIGYTPSDS-DNIS 124 + C S + + ++I+G P+ + Sbjct: 12 IIKCKKCPRLVEFIKKISTNKRKQNINETYWGKPVTGFGDINAKILILGLAPAAHGGTRT 71 Query: 125 GKPFSGKT-GNMLDKMLQS-------------IEIMRTQIHISMISPWHPPGNRNLSNIE 170 G+ F+G G L K L + +I+ I PP ++ L + Sbjct: 72 GRAFTGDKSGEFLFKCLHEVKIANQSRSENINDNLKLDDAYITNILKCVPPNDKPLKDEL 131 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230 + L K ++ +G + + ++ N + H + Sbjct: 132 NNCSKYFDFEIKNLKKLKTIIALGKVAFDSCIKHYKKRYKIN----KKIVFKHGKFYLMP 187 Query: 231 -------TVHPQELIQYPLIK----KNTWHALITLKK 256 HP + K K + +K+ Sbjct: 188 DNIVLISCYHPSP--RNVNTKLISLKMMVNLFKKVKR 222 >gi|189219255|ref|YP_001939896.1| Uracil-DNA glycosylase [Methylacidiphilum infernorum V4] gi|189186113|gb|ACD83298.1| Uracil-DNA glycosylase [Methylacidiphilum infernorum V4] Length = 236 Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 30/210 (14%), Positives = 65/210 (30%), Gaps = 46/210 (21%) Query: 70 IAQKACSLHELKSLLRSFHDCH---------LCS---------TSLSTICATQTEGQDLM 111 + A L L + + C L + +L+ Sbjct: 1 MPTPAKELSYLNEKIVACRLCPRLVAWREEILKKKPKRFAAESYWSRPVPGFGDPLAELL 60 Query: 112 IIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQSIEIM-------------RTQIHISMIS 156 I+G P+ N +G+ F+G ++G+ L + L +++I+ Sbjct: 61 IVGLAPAAHGGNRTGRIFTGDRSGDFLFETLHRFGYSSSPRSISREDSLVLNKVYITATV 120 Query: 157 PWHPPGNRNLSNIEMEICRPIIMRQIEL-ISPKILLFIGNKTKNFF----------FNND 205 PP N S E+ CRP ++ ++ + + +++L +G + Sbjct: 121 RCAPPNN-KPSPEEIAHCRPYLIEELRILKNIRVILALGRIAFDNVWQTVKLTFQSQGKS 179 Query: 206 AQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 + P + + + HP Sbjct: 180 FACKKPSFSHGIEQKLPDGKV-LIGSFHPS 208 >gi|149200955|ref|ZP_01877930.1| uracil-DNA glycosylase, putative [Roseovarius sp. TM1035] gi|149145288|gb|EDM33314.1| uracil-DNA glycosylase, putative [Roseovarius sp. TM1035] Length = 195 Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 66/198 (33%), Gaps = 23/198 (11%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICA-----TQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 + +L + +R+ C + T A L+I G P + SGKPF Sbjct: 1 MSDLTAEIRACRLCADRFAATHTAHAPRPVVWFQPTARLLIAGQAPGLRVHQSGKPFDDP 60 Query: 132 TGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI---CRPIIMRQIELI 185 +G+ L L ++++ I ++ P + S++ + Sbjct: 61 SGDRLRDWLGLNACEFYDKSRVAIVPMAFCFPGYDAKGSDLPPPRICGRTWHVRVMQAFE 120 Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-K 244 + ++ + +G + Q + W + +P HP + K Sbjct: 121 NVRLTVLVGGYAHKYHLGVKTGV-TQTVQAWRDYAPRIFTLP-----HPSW--RNTAWLK 172 Query: 245 KNTW--HALI-TLKKALK 259 K+ W ++ L+ ++ Sbjct: 173 KHPWFEADVLPELRAQIQ 190 >gi|331694769|ref|YP_004331008.1| uracil-DNA glycosylase [Pseudonocardia dioxanivorans CB1190] gi|326949458|gb|AEA23155.1| Uracil-DNA glycosylase superfamily [Pseudonocardia dioxanivorans CB1190] Length = 237 Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 27/204 (13%), Positives = 59/204 (28%), Gaps = 44/204 (21%) Query: 73 KACSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLMIIG 114 +L L + C + L+I+G Sbjct: 3 APATLALLDDEVSRCRACPRLVAWREKVAAEKRAAYRDQTYWGRPVPGFGPADAALLIVG 62 Query: 115 YTPSDS-DNISGKPFSG-KTGNMLDKMLQSIEIMRTQ-------------IHISMISPWH 159 P+ N +G+ F+G ++G++L L ++ + I+ Sbjct: 63 LAPAAHGGNRTGRMFTGDRSGDVLYAALHAVGLANQPIAVSADDGLALRGTRITAPVHCA 122 Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFF--------NNDAQKT 209 PP N + E + CR + ++ L++P + ++ +G + + Sbjct: 123 PPDN-KPTTEERDTCRRWLDAELALLAPTLRTVVVLGAFGWQSLLPVLGENGWDVPRPRP 181 Query: 210 YQNLGKWSNLCTPHSIIPTLATVH 233 G L + + H Sbjct: 182 RFGHGAHVVLTGRRGPLQVFGSYH 205 >gi|315426583|dbj|BAJ48212.1| uracil-DNA glycosylase superfamily protein [Candidatus Caldiarchaeum subterraneum] Length = 231 Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 67/204 (32%), Gaps = 45/204 (22%) Query: 76 SLHELKSLLRSFHDCH-LCSTSL-----------------STICATQTEGQDLMIIGYTP 117 S +L + + S C L + G ++++G P Sbjct: 2 SFEDLNNRIISCKLCPRLVKYREEVAKNPPKRFRGQTYWAKPLPGFGDVGARVLVLGLAP 61 Query: 118 SDS-DNISGKPFSGK-TGNMLDKMLQSIEIMRT-------------QIHISMISPWHPPG 162 + N +G+ F+G +G+ L + L ++I+ + PP Sbjct: 62 AAHGGNRTGRMFTGDSSGDTLVRALHRAGFANMGRSISINDGLVLKDVYITAVVRCAPPD 121 Query: 163 NRNLSNIEMEICRPIIMRQIEL-ISPKILLFIGNKTKNFFF-------NNDAQKTYQNLG 214 N + E+E C P ++ ++ + + +++ +G FF + G Sbjct: 122 N-KPAKQEVENCLPYLIEELRMLENVVVVVALGRFAFETFFRLMRRMNAYSGRIPRFRHG 180 Query: 215 KWSNLCTPHSIIP---TLATVHPQ 235 L + P +A+ HP Sbjct: 181 AVYRLNGSFNGKPLPTVIASYHPS 204 >gi|315425049|dbj|BAJ46722.1| uracil-DNA glycosylase [Candidatus Caldiarchaeum subterraneum] Length = 231 Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 67/204 (32%), Gaps = 45/204 (22%) Query: 76 SLHELKSLLRSFHDCH-LCSTSL-----------------STICATQTEGQDLMIIGYTP 117 S +L + + S C L + G ++++G P Sbjct: 2 SFEDLNNRIISCKLCPRLVKYREEVAKNPPKRFRGQTYWAKPLPGFGDVGARVLVLGLAP 61 Query: 118 SDS-DNISGKPFSGK-TGNMLDKMLQSIEIMRT-------------QIHISMISPWHPPG 162 + N +G+ F+G +G+ L + L ++I+ + PP Sbjct: 62 AAHGGNRTGRMFTGDSSGDTLVRALHRAGFANMGRSISINDGLVLKDVYITAVVRCAPPD 121 Query: 163 NRNLSNIEMEICRPIIMRQIEL-ISPKILLFIGNKTKNFFF-------NNDAQKTYQNLG 214 N + E+E C P ++ ++ + + +++ +G FF + G Sbjct: 122 N-KPAKQEVENCLPYLIEELRMLENVVVVVALGRFAFETFFRLMRRMNAYSGRIPRFRHG 180 Query: 215 KWSNLCTPHSIIP---TLATVHPQ 235 L + P +A+ HP Sbjct: 181 AVYRLNGSFNGKPLPTVIASYHPS 204 >gi|160896423|ref|YP_001562005.1| phage SPO1 DNA polymerase-like protein [Delftia acidovorans SPH-1] gi|160362007|gb|ABX33620.1| phage SPO1 DNA polymerase-related protein [Delftia acidovorans SPH-1] Length = 320 Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 52/166 (31%), Gaps = 16/166 (9%) Query: 102 ATQTEGQDLMIIGYTPS----------DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH 151 EG +I+ P+ + + G +LD ML+++ + Sbjct: 148 GDGGEGG-WLILLEPPANSLPLPPAQRPGPDCARTALEGDAARLLDNMLRALNLQDHPRL 206 Query: 152 ISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQ 211 S P E+ +P + + + P +L +G T + Sbjct: 207 YSAALHRVQPAAEGQEAPEVPALQPSLEALLRDLRPACVLVLGLATARAVLQRQ-----E 261 Query: 212 NLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKA 257 LG+ + +P + + P L++ P K W L + Sbjct: 262 ALGRLRAEPHRIAGVPAVVSYDPNYLLRAPQAKAGAWADLCHAQAF 307 >gi|126733709|ref|ZP_01749456.1| Uracil-DNA glycosylase superfamily protein [Roseobacter sp. CCS2] gi|126716575|gb|EBA13439.1| Uracil-DNA glycosylase superfamily protein [Roseobacter sp. CCS2] Length = 193 Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 67/201 (33%), Gaps = 31/201 (15%) Query: 80 LKSLLRSFHDCHLCSTSLST-------ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 L+ + + C + +T + ++I P + +G PF ++ Sbjct: 3 LQEEISACTLCRDRFAATATRHQPRPIVWFETPP--RILIASQAPGMRVHAAGTPFWDRS 60 Query: 133 GNMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRN-----LSNIEMEICRPIIMRQIEL 184 G+ L L R++I I ++ P + I +M + Sbjct: 61 GDRLRDWLGVNPDTFYDRSKIAIVPMAFCFPGYDAKGSDLPPPPICRATWHDRVMAALGQ 120 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI- 243 + K L +G + N+ + T G W +L HP + Sbjct: 121 VQLK--LLVGGYAHRWHLNSRSGVTETVRG-WRDL-----GPRVFPLPHPSW--RNTAWL 170 Query: 244 KKNTW--HALI-TLKKALKNL 261 KKN W L+ L+ A+K++ Sbjct: 171 KKNPWFEADLLPELRAAVKDV 191 >gi|259419017|ref|ZP_05742934.1| uracil-DNA glycosylase superfamily protein [Silicibacter sp. TrichCH4B] gi|259345239|gb|EEW57093.1| uracil-DNA glycosylase superfamily protein [Silicibacter sp. TrichCH4B] Length = 222 Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 64/198 (32%), Gaps = 25/198 (12%) Query: 80 LKSLLRSFHDCHLCSTSLST------ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 LK + + C + T + G ++I G P + SGKPF+ +G Sbjct: 30 LKHQIAACTLCATRFAATETAHQPRPVVWF-QPGARILIAGQAPGLRVHESGKPFTDPSG 88 Query: 134 NMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLS--NIEMEICRPIIMRQIEL-ISP 187 + L L + ++++ I ++ P + + R +E Sbjct: 89 DRLRDWLGLNEEEFYDQSRVAIVPMAFCFPGYDAKNADLPPPPICGETWHDRVMEALCRV 148 Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKN 246 ++ + +G + T W +L A HP + K+N Sbjct: 149 RLRIIVGGHAHRYHLKTRKGVTEVVR-DWRSLPDG-----VFALPHPSW--RNTAWLKRN 200 Query: 247 TW---HALITLKKALKNL 261 W L L+ +K L Sbjct: 201 PWFETELLPVLRARVKEL 218 >gi|238020680|ref|ZP_04601106.1| hypothetical protein GCWU000324_00570 [Kingella oralis ATCC 51147] gi|237867660|gb|EEP68666.1| hypothetical protein GCWU000324_00570 [Kingella oralis ATCC 51147] Length = 247 Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 38/153 (24%), Positives = 57/153 (37%), Gaps = 13/153 (8%) Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL 166 L+++ PS D +GK FSG G ML ML +I + Q H S P N Sbjct: 108 PAKLLVLSVCPSVDDMAAGKLFSGADGEMLHNMLNAIALPPEQAHFSTWLKNSPDFNPRP 167 Query: 167 SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII 226 + P I R+ + + +L +G+ ++ I Sbjct: 168 DAQTITAAAPDIAREWQQTRAQAMLLLGDFFHRPEVQAALNAIAPAAARYH--------I 219 Query: 227 PTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 P HP L P +K++ W L L+ ALK Sbjct: 220 P-----HPMRLAGNPQLKRSAWETLQKLQAALK 247 >gi|218295447|ref|ZP_03496260.1| Uracil-DNA glycosylase superfamily [Thermus aquaticus Y51MC23] gi|218244079|gb|EED10605.1| Uracil-DNA glycosylase superfamily [Thermus aquaticus Y51MC23] Length = 223 Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 28/216 (12%), Positives = 57/216 (26%), Gaps = 41/216 (18%) Query: 74 ACSLHELKSLLRSFHDCHLCSTSL-----------------STICATQTEGQDLMIIGYT 116 A L L H C + +++ G Sbjct: 4 AVDLESFARELVQCHLCPRLVAWREGVAGKRRAFREEAYWARPVPGFGDPKARILLFGLA 63 Query: 117 PSDSD-NISGKPFSGK-TGNMLDKMLQSIE------------IMRTQIHISMISPWHPPG 162 P N +G+PF+G +G L +L + ++++ PP Sbjct: 64 PGAHGANRTGRPFTGDASGAFLYPLLYQAGLASKPESLPGDDLRLHGVYLTAAVRCAPPD 123 Query: 163 NRNLSNIEMEICRPIIMRQIE-LISPKILLFIGNKTKNFF---FNNDAQKTYQNLGKWSN 218 N + E+ C ++ L ++ L +G+ + G+ Sbjct: 124 N-RPTPEELRTCARWTEVELSLLPELRVFLALGHIAHQALLAHLGLRKRDFPFAHGRVYP 182 Query: 219 LCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 L + + H Q + T + + Sbjct: 183 LE---GGRYLVDSYHVS--RQNTQTGRLTREMFLEV 213 >gi|288940210|ref|YP_003442450.1| Uracil-DNA glycosylase superfamily [Allochromatium vinosum DSM 180] gi|288895582|gb|ADC61418.1| Uracil-DNA glycosylase superfamily [Allochromatium vinosum DSM 180] Length = 241 Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 63/198 (31%), Gaps = 13/198 (6%) Query: 47 DSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTE 106 + I P T + + L + + + +L L + L + C + + + Sbjct: 6 PARISPKTLNHTMTTGLPNTKNELDTRQAALLTLHAELETCCRCP--KMYGPAVHSE-SV 62 Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM----RTQIHISMISPWHPPG 162 +M+IG P + KPF G L + + R +I +S + P Sbjct: 63 LSPVMLIGQAPGTREIEQLKPFCWTAGKTLFNWFAPLGLDETAFRARILMSAVCRCFPGK 122 Query: 163 NRN-----LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS 217 N E+ C ++EL+ P++LL +G +WS Sbjct: 123 NPKGGDRVPDRDEVARCERWWRGELELLRPRLLLPVGKLAIAQLMPVPRLNDVIGR-QWS 181 Query: 218 NLCTPHSIIPTLATVHPQ 235 + HP Sbjct: 182 YRSPEGWEADVIPLPHPS 199 >gi|82702398|ref|YP_411964.1| uracil-DNA glycosylase superfamily protein [Nitrosospira multiformis ATCC 25196] gi|82410463|gb|ABB74572.1| Uracil-DNA glycosylase superfamily [Nitrosospira multiformis ATCC 25196] Length = 238 Score = 65.5 bits (158), Expect = 6e-09, Method: Composition-based stats. Identities = 33/194 (17%), Positives = 50/194 (25%), Gaps = 34/194 (17%) Query: 65 QQADSIAQKACSLHELKSLLRSFHDCHLCST------SLS------TICATQTEGQDLMI 112 Q+A + QK S C + + + A L+I Sbjct: 3 QEARILLQKTPDNSSPVEFSASCRRCPRLAGFLDEVKARHIDYYARPVPAFGDPKPRLLI 62 Query: 113 IGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEI-------------MRTQIHISMISP 157 IG P N +G+PF+G G +L L Q I+ Sbjct: 63 IGLAPGMHGANRTGRPFTGDFAGILLYGTLFKFGFASHEGSASINDNLELMQCRITNAVK 122 Query: 158 WHPPGNRNLSNIEMEICRPIIMRQIELIS---PKILLFIGNKTKNFF---FNNDAQKTYQ 211 PP N E+ C + +I + LL +G + Sbjct: 123 CLPPEN-KPEASEIRQCNSYLAHEISAFAEGGGSALLALGAVAHQAVLMALGLKPKSHAF 181 Query: 212 NLGKWSNLCTPHSI 225 G L Sbjct: 182 RHGAVHALAGNFGS 195 >gi|89902887|ref|YP_525358.1| uracil-DNA glycosylase superfamily protein [Rhodoferax ferrireducens T118] gi|89347624|gb|ABD71827.1| Uracil-DNA glycosylase superfamily [Rhodoferax ferrireducens T118] Length = 201 Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 30/204 (14%), Positives = 68/204 (33%), Gaps = 17/204 (8%) Query: 68 DSIAQKACSLHELKSLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126 +L L + +R+ C + E ++I+G P + +G Sbjct: 2 AEPEAAYPNLDALLTAVRNCRACESHLPLGPRPVLRAG-EAARILIVGQAPGVRVHTTGI 60 Query: 127 PFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE 183 P+ +G L + +++ ++I I + +P R C + + Q+ Sbjct: 61 PWDDPSGERLRAWMGVDKALFYDESRIAIIPMGYCYPGRARGGDLPPRRECAALWLDQLL 120 Query: 184 LISPKI--LLFIGNKTKNFFFNNDAQKTYQNLGK-WSNLCTPHSIIPTLATVHPQELIQY 240 P+I L +G ++ F + + + W + HP Sbjct: 121 SRMPRIELTLLVGQYAQHHFLGSRRKPSLTETTMAWREYAPRF-----IPLPHPSP-RNQ 174 Query: 241 PLIKKNTW--HALI-TLKKALKNL 261 P K++ W ++ L+ + + Sbjct: 175 PWFKQHAWFEEDVVPALQARINAM 198 >gi|312194543|ref|YP_004014604.1| uracil-DNA glycosylase superfamily [Frankia sp. EuI1c] gi|311225879|gb|ADP78734.1| Uracil-DNA glycosylase superfamily [Frankia sp. EuI1c] Length = 297 Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 32/240 (13%), Positives = 67/240 (27%), Gaps = 47/240 (19%) Query: 42 KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI- 100 + + ++A A EL + C + Sbjct: 8 PVAAGTGWPGDPATATTPVALTAGDVVALAGAAGGADELDACASVCRACPRLVDWREEVA 67 Query: 101 -----------------CATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQ 141 + ++++G P+ N +G+ F+G ++G+ L L Sbjct: 68 RVRRAAYAGERYWGRPMPSFGPPDARVLVVGLAPAAHGGNRTGRIFTGDRSGDWLFAALY 127 Query: 142 S-------------IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP- 187 I+ PP + E ++CRP ++R++EL+ P Sbjct: 128 RVGLAASPTSTAAGDGQRLLDARITAAVRCAPP-ANKPTPAERDVCRPWLVRELELLRPR 186 Query: 188 -KILLFIGNKTKNFF--------FNNDAQKTYQNLG---KWSNLCTPHSIIPTLATVHPQ 235 + ++ +G F ++ G + L + L HP Sbjct: 187 LRAIVVLGGFAWQALWPALADAGFGLPPRRPAFGHGARVELPALAGAPAGPLLLGCYHPS 246 >gi|262392952|ref|YP_003284806.1| uracil-DNA glycosylase [Vibrio sp. Ex25] gi|262336546|gb|ACY50341.1| uracil-DNA glycosylase [Vibrio sp. Ex25] Length = 190 Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 71/181 (39%), Gaps = 17/181 (9%) Query: 76 SLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 SL L +R+ C +L + + A +G ++IIG P + + P++ +G Sbjct: 2 SLETLLQQVRACQICADNLPLGANPVVQA--AKGARILIIGQAPGTRVHKTSIPWNDPSG 59 Query: 134 NMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--K 188 + L + L + +I I + +P + + C P R+I P + Sbjct: 60 DRLRQWLDIDKDVFYDPNKIAIVPMGFCYPGKGNSGDLPPRKECAPTWHRKILEQLPNIE 119 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247 + L IG ++ ++ N + Q + +W + + HP + L KKN Sbjct: 120 LTLLIGQYSQQYYLTNKPKTLTQTVQQWQDWEPDF-----IPLPHPSP--RNTLWLKKNP 172 Query: 248 W 248 W Sbjct: 173 W 173 >gi|325673716|ref|ZP_08153407.1| uracil-DNA glycosylase [Rhodococcus equi ATCC 33707] gi|325555737|gb|EGD25408.1| uracil-DNA glycosylase [Rhodococcus equi ATCC 33707] Length = 290 Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 27/240 (11%), Positives = 63/240 (26%), Gaps = 45/240 (18%) Query: 40 QRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL-- 97 + + + ++A A +L ++ + + C Sbjct: 16 PSPVPPGTGWPGDPADEQTPVAHSAADVVALAADAKNLLDIDARISVCRACPRLVEWRER 75 Query: 98 ----------------STICATQTEGQDLMIIGYTPSDS-DNISGKPFSGK-TGNMLDKM 139 + + L+I+G P+ + N +G+ F+G G+ L + Sbjct: 76 AAETKRASFANQPYWGRPVTGFGGDFAKLLIMGLAPAANGGNRTGRMFTGDQAGDWLFRA 135 Query: 140 LQS-------------IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186 L + + PP N S E + C + + + Sbjct: 136 LHRAGLATRAEVDHAGDGQKLFGVRMLSAVRCAPPEN-KPSIEERDCCAGWLDAEFARLL 194 Query: 187 P--KILLFIGNKTKNFFFN--------NDAQKTYQNLGKWSN-LCTPHSIIPTLATVHPQ 235 P + ++ +G + K G+ + + + HP Sbjct: 195 PFARAVVALGAFGWDATLGAVRRSGGTVPTPKPKFGHGQIAVLHTADGKPLNVIGCYHPS 254 >gi|77918350|ref|YP_356165.1| putative uracil-DNA glycosylase [Pelobacter carbinolicus DSM 2380] gi|77544433|gb|ABA87995.1| putative uracil-DNA glycosylase [Pelobacter carbinolicus DSM 2380] Length = 224 Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 25/189 (13%), Positives = 54/189 (28%), Gaps = 38/189 (20%) Query: 82 SLLRSFHDC----------------HLCSTSLSTICATQTEGQDLMIIGYTPSDSD-NIS 124 + S C + + ++G P N + Sbjct: 7 ENIASCRRCQRLVDYIADLPPAKGRRRSEYWNRPVPGFGDLQARIFLVGLAPGAHGANRT 66 Query: 125 GKPFSGK-TGNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIE 170 G+PF+G G+ + +L ++IS PP N E Sbjct: 67 GRPFTGDGAGDFMYPLLHEAGFASQAEAVSSDDGLELYDLYISNAVKCVPPQN-KPLAAE 125 Query: 171 MEICRPIIMRQIEL-ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP-----HS 224 +CRP + +++ + K+++ +G + + ++ + Sbjct: 126 FHLCRPFLTAELKRLTNLKVVVALGRAAFDSYMRLCVEQGHIQRMAEFPFAHGASYLLPH 185 Query: 225 IIPTLATVH 233 I +A H Sbjct: 186 GIWVVACYH 194 >gi|260428760|ref|ZP_05782737.1| conserved hypothetical protein [Citreicella sp. SE45] gi|260419383|gb|EEX12636.1| conserved hypothetical protein [Citreicella sp. SE45] Length = 198 Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 61/204 (29%), Gaps = 29/204 (14%) Query: 75 CSLHELKSLLRSFHDCHLCSTSL------STICATQTEGQDLMIIGYTPSDSDNISGKPF 128 +L +L + L C + + G L+I G P + G+PF Sbjct: 3 DTLDDLSTRLSDCRLCADRFAATATRHAPRPVVWF-DRGARLLIAGQAPGLKVHERGRPF 61 Query: 129 SGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRN-----LSNIEMEICRPIIMR 180 +G L L ++ R++I I ++ P + + + Sbjct: 62 DDPSGTRLRDWLGLSEAQFWDRSRIAIVPMAFCFPGYDAKGADLPPPPLCRATWHDALFE 121 Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 + I ++ + G + T G W + + HP + Sbjct: 122 ALGEIRLRVYV--GGYAHRYHLGARTGVTETVRG-WRDHLPD-----AIPLPHPSW--RN 171 Query: 241 PLI-KKNTW-HA--LITLKKALKN 260 K+N W L L+ ++ Sbjct: 172 TAWLKRNPWFADELLPVLRARVRE 195 >gi|329940848|ref|ZP_08290128.1| Uracil-DNA glycosylase, family 5 [Streptomyces griseoaurantiacus M045] gi|329300142|gb|EGG44040.1| Uracil-DNA glycosylase, family 5 [Streptomyces griseoaurantiacus M045] Length = 274 Score = 65.2 bits (157), Expect = 9e-09, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 53/161 (32%), Gaps = 36/161 (22%) Query: 77 LHELKSLLRSFHDCHL------------------CSTSLSTICATQTEGQDLMIIGYTPS 118 L EL + C + + L+I+G P+ Sbjct: 22 LEELDERIAGCRACPRLVAWREEVARTRRAAFADWTYWGRPVPGFGPPDASLLILGLAPA 81 Query: 119 DS-DNISGKPFSG-KTGNMLDKMLQS-------------IEIMRTQIHISMISPWHPPGN 163 N +G+ F+G ++G++L L + + I+ PP Sbjct: 82 AHGGNRTGRMFTGDRSGDVLYAALHEVGLASQARAERIGDGLELYGVRITSPVHCAPP-A 140 Query: 164 RNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFF 202 + E + CRP ++R++ L+ P + ++ +G Sbjct: 141 NKPTPGERDTCRPWLVRELTLLRPSLRAVVVLGAFGWQAAL 181 >gi|329947528|ref|ZP_08294720.1| uracil-DNA glycosylase, family 4 [Actinomyces sp. oral taxon 170 str. F0386] gi|328524218|gb|EGF51291.1| uracil-DNA glycosylase, family 4 [Actinomyces sp. oral taxon 170 str. F0386] Length = 278 Score = 65.2 bits (157), Expect = 9e-09, Method: Composition-based stats. Identities = 30/238 (12%), Positives = 60/238 (25%), Gaps = 45/238 (18%) Query: 42 KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL---- 97 + +A + L L + + C T Sbjct: 15 PVPPGTGWPDDPATATTPMARSAADVARLAGASSDLPALDARITVCRACDRLVTWREEVA 74 Query: 98 ---------------STICATQTEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKML 140 + + + ++G P+ + N +G+ F+G ++G+ L Sbjct: 75 RSGRRASFSHEPYWGRPVASVGAADARIYVVGLAPAANGANRTGRMFTGDRSGDWLWAAF 134 Query: 141 QS-------------IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE-LIS 186 T + PP + +E C P + R+I + Sbjct: 135 YRAGLATSPTSTAAGDGQRLTGARMGAAVRCAPP-ANKPTTVERTTCAPWLAREIALMPE 193 Query: 187 PKILLFIGNKTKNFFF--------NNDAQKTYQNLGKWSNL-CTPHSIIPTLATVHPQ 235 K+LL +G + G + L + L + HP Sbjct: 194 VKVLLALGGIGWGAALRVTREAGWTLPRPQPRFGHGATAELTRPDGRPVTLLGSYHPS 251 >gi|28899689|ref|NP_799294.1| hypothetical protein VP2915 [Vibrio parahaemolyticus RIMD 2210633] gi|153838909|ref|ZP_01991576.1| uracil DNA glycosylase superfamily [Vibrio parahaemolyticus AQ3810] gi|260878157|ref|ZP_05890512.1| uracil DNA glycosylase superfamily [Vibrio parahaemolyticus AN-5034] gi|260897880|ref|ZP_05906376.1| uracil DNA glycosylase superfamily [Vibrio parahaemolyticus Peru-466] gi|260902145|ref|ZP_05910540.1| uracil DNA glycosylase superfamily [Vibrio parahaemolyticus AQ4037] gi|28807941|dbj|BAC61178.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] gi|149747617|gb|EDM58541.1| uracil DNA glycosylase superfamily [Vibrio parahaemolyticus AQ3810] gi|308085544|gb|EFO35239.1| uracil DNA glycosylase superfamily [Vibrio parahaemolyticus Peru-466] gi|308090241|gb|EFO39936.1| uracil DNA glycosylase superfamily [Vibrio parahaemolyticus AN-5034] gi|308110160|gb|EFO47700.1| uracil DNA glycosylase superfamily [Vibrio parahaemolyticus AQ4037] Length = 190 Score = 65.2 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 69/181 (38%), Gaps = 17/181 (9%) Query: 76 SLHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 SL L +R+ C L + + + + ++IIG P + + P++ +G Sbjct: 2 SLENLLQQVRACQICAESLPLGA-NPVVQAG-KNARILIIGQAPGTKVHSTSIPWNDPSG 59 Query: 134 NMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--K 188 + L + L + +I I + +P + + C P ++I P + Sbjct: 60 DRLRQWLDIDKDVFYDPNKIAIVPMGFCYPGKGNSGDLPPRKECAPTWHKKILEQLPNIE 119 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247 + L IG ++ ++ N + Q + +W + + HP + L KKN Sbjct: 120 LTLLIGQFSQQYYLTNKPKTLTQTVQQWQDWEPEF-----IPLPHPSP--RNTLWLKKNP 172 Query: 248 W 248 W Sbjct: 173 W 173 >gi|313902356|ref|ZP_07835760.1| Uracil-DNA glycosylase superfamily [Thermaerobacter subterraneus DSM 13965] gi|313467404|gb|EFR62914.1| Uracil-DNA glycosylase superfamily [Thermaerobacter subterraneus DSM 13965] Length = 320 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 26/187 (13%), Positives = 60/187 (32%), Gaps = 36/187 (19%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHL------------------ 92 QP T P + A ++ + + + C Sbjct: 7 QPGTVPAAAAVPPCDPVAAAGDAAAAIARIHQDIVACRRCPRLVAYTAQVARTRRRAYRD 66 Query: 93 CSTSLSTICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK-TGNMLDKML---------- 140 + L+++G P+ N +G+ F+G +G+ L + L Sbjct: 67 WDYWGRPVPGFGDPQARLLVVGLAPAAHGANRTGRMFTGDSSGDWLYRALYRAGFASQPT 126 Query: 141 ---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGN 195 + + +I+ PP N S E+ C + R+++++ P ++++ +G Sbjct: 127 ATHRDDGLRLHGAYITAACRCAPPDN-KPSREELAACSAFLRRELDVLWPGVRVIVCLGQ 185 Query: 196 KTKNFFF 202 + Sbjct: 186 IAFDAVL 192 >gi|114797491|ref|YP_761471.1| uracil-DNA glycosylase family protein [Hyphomonas neptunium ATCC 15444] gi|114737665|gb|ABI75790.1| uracil-DNA glycosylase family protein [Hyphomonas neptunium ATCC 15444] Length = 219 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 28/186 (15%), Positives = 58/186 (31%), Gaps = 33/186 (17%) Query: 81 KSLLRSFHDCHLCST---------SLST------ICATQTEGQDLMIIGYTPSDSD-NIS 124 + + DC LC + + + + L+I+G P + N + Sbjct: 6 AAAPEAPRDCPLCPRLVAYREAVRAKEPSWFNGAVPSFGKDDAQLLIVGLAPGVTGANRT 65 Query: 125 GKPFSGK-TGNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSNIE 170 G+PF+G G++L L + + I+ PP N+ + Sbjct: 66 GRPFTGDWAGDLLYATLDKFGFSKGKFAADPNDGLVLTGAMITNAVRCVPPENKPVGAEI 125 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSNLCTPHSIIP 227 + + R L K++L +G + + G + + Sbjct: 126 NQCRPFLEARIAALPKLKVILCLGKISHDSTLRALGLKVAAHPFGHGTKYEVEANGKPVT 185 Query: 228 TLATVH 233 L++ H Sbjct: 186 LLSSYH 191 >gi|254460579|ref|ZP_05073995.1| uracil-DNA glycosylase superfamily [Rhodobacterales bacterium HTCC2083] gi|206677168|gb|EDZ41655.1| uracil-DNA glycosylase superfamily [Rhodobacteraceae bacterium HTCC2083] Length = 197 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 69/203 (33%), Gaps = 31/203 (15%) Query: 81 KSLLRSFHDCHLC-----STSLSTIC------ATQTEGQDLMIIGYTPSDSDNISGKPFS 129 K+LL+ C LC T+ + ++I G P + SG+PF+ Sbjct: 2 KALLQDITKCQLCADRFAKTATQHAPRPVLWVSANGVKSRILIAGQAPGARVHESGRPFT 61 Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQI 182 +G+ L L ++ R+++ I+ ++ P G+ + Sbjct: 62 DPSGDRLRDWLGLDEATFYDRSKLAIAPMAFCFPGYNAKGSDLPPPAICAKSWRRPLMDA 121 Query: 183 ELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL 242 P + L IG+ + + T + +W + HP + Sbjct: 122 LGPMP-LTLLIGSYAMKWHLGGAPKVTQTVM-EWQSHAPS-----VFPLPHPSW--RNTA 172 Query: 243 I-KKNTW--HALI-TLKKALKNL 261 KKN W L+ L+ ++ + Sbjct: 173 WLKKNPWFEADLLPVLRARVQEV 195 >gi|298290884|ref|YP_003692823.1| hypothetical protein Snov_0880 [Starkeya novella DSM 506] gi|296927395|gb|ADH88204.1| conserved hypothetical protein [Starkeya novella DSM 506] Length = 211 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 26/195 (13%), Positives = 51/195 (26%), Gaps = 22/195 (11%) Query: 73 KACSLHELKSLLRSFHDC---HLCS---TSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126 + +L + + +R+ C L + ++I G P + SG+ Sbjct: 2 PSDTLDAVLAEIRACRVCVEHPLGKPLPHEPRPVLHVG-PRSRILIAGQAPGTKVHASGR 60 Query: 127 PFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRN--LSNIEMEICRPIIMRQ 181 F +G L L +I I+ + P + E R Sbjct: 61 SFDDASGKRLRDWLGIDADTFYDAERISIAAMGFCFPGQDAKGGDLPPRRECASLWHDRL 120 Query: 182 IELISPKILLFIGNKTKNF-FFNNDAQKTYQNLG------KWSNLCTPHSIIPTLATVHP 234 P L+ + + G +W + + HP Sbjct: 121 FAARKPFELVVAVGAASQAYHLKRLGLERFAAGGLTERVERWREIWDARETPRIVPLPHP 180 Query: 235 QELIQYPLI-KKNTW 248 + K++ W Sbjct: 181 SW--RNTGWLKRHPW 193 >gi|302561216|ref|ZP_07313558.1| uracil-DNA glycosylase, family 4 [Streptomyces griseoflavus Tu4000] gi|302478834|gb|EFL41927.1| uracil-DNA glycosylase, family 4 [Streptomyces griseoflavus Tu4000] Length = 238 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 65/224 (29%), Gaps = 47/224 (20%) Query: 77 LHELKSLLRSFHDCHL------------------CSTSLSTICATQTEGQDLMIIGYTPS 118 L L + C + + L+IIG P+ Sbjct: 6 LDRLDQRIAGCRACPRLVEWREEVARTKRAAFADWTYWGRPVPGFGPPDARLLIIGLAPA 65 Query: 119 DS-DNISGKPFSG-KTGNMLDKMLQS-------------IEIMRTQIHISMISPWHPPGN 163 N +G+ F+G ++G++L + L + + ++ PP Sbjct: 66 AHGGNRTGRMFTGDRSGDVLYRALYDVGLASRPTSVHAGDGLELYGVRVTSPVHCAPP-A 124 Query: 164 RNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFF--------NNDAQKTYQNL 213 + E + CRP ++R++ L+ P + L +G + Sbjct: 125 NRPTPEERDACRPWLVRELNLLRPTVRAALVLGAFGWQAALPAFAEAGWTVPRPRPAFAH 184 Query: 214 GKWSNLCTPHS-IIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 G L P + H + + + T L + + Sbjct: 185 GAHVTLDAPDGPGLHLFGCFHVSQ--RNTFTGRLTPEMLREVLR 226 >gi|313680614|ref|YP_004058353.1| uracil-DNA glycosylase superfamily [Oceanithermus profundus DSM 14977] gi|313153329|gb|ADR37180.1| Uracil-DNA glycosylase superfamily [Oceanithermus profundus DSM 14977] Length = 228 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 28/195 (14%), Positives = 50/195 (25%), Gaps = 35/195 (17%) Query: 73 KACSLHELKSLLRSFHDCHL---------CSTSL---------STICATQTEGQDLMIIG 114 L +L L + C + L+I G Sbjct: 5 TPERLEDLYRELAACRRCERLVAWREEVGRKKRRAFRAETYWARPVPGFGDPNARLLIFG 64 Query: 115 YTPSDSD-NISGKPFSGK-TGNMLDKMLQS-------------IEIMRTQIHISMISPWH 159 P N +G+ F+G +G+ L L + +I+ Sbjct: 65 LAPGAHGSNRTGRMFTGDASGDFLYPALWRAGLASRPRSERPGDGLELRGAYITAAVRCA 124 Query: 160 PPGNRNLSNIEMEICRPIIMRQIE-LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218 PPGN + E C R++ L ++ L +G + + + Sbjct: 125 PPGN-KPTRAEFAACSAWTARELALLPELRVYLALGRLAHDALLEHHGLVKARFPFAHGA 183 Query: 219 LCTPHSIIPTLATVH 233 L + H Sbjct: 184 EHALPDGRVLLDSYH 198 >gi|323475799|gb|ADX86405.1| uracil-DNA glycosylase superfamily [Sulfolobus islandicus REY15A] Length = 222 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 70/217 (32%), Gaps = 35/217 (16%) Query: 77 LHELKSLLRSFHDCHLC---------STSLSTICATQTEGQDLMIIGYTPSDS-DNISGK 126 + S L S + C + + +++IIG P+ + N +G+ Sbjct: 1 MENFISRLISCNKCPRLTQYRNSFPDNYWKKPVPPNGEINAEIVIIGLAPAANGGNRTGR 60 Query: 127 PFSG-KTGNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSNIEME 172 F+G ++ N L L ++ +I+ PP N + E+ Sbjct: 61 MFTGDESSNNLTNALYAVGFANQPFSISKDDGLKVFRVYITSAVKCAPPQN-KPNKDEII 119 Query: 173 ICRPIIMRQIEL-ISPKILLFIGNKTKNFF------FNNDAQKTYQNLGKWSNLCTPH-S 224 C + ++ + + K+ + G + G + P S Sbjct: 120 NCSTFLEEEVRMLENAKVYIAFGKVAWDSIIYVFKKIGYSVPNVKFYHGALVKVTKPDMS 179 Query: 225 IIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 II + + HP + + T + L+ + K L Sbjct: 180 IIWLIGSYHPSP--RNMKTGRLTMNMLVEIFSTAKKL 214 >gi|227828817|ref|YP_002830597.1| uracil-DNA glycosylase superfamily [Sulfolobus islandicus M.14.25] gi|227831550|ref|YP_002833330.1| Uracil-DNA glycosylase superfamily [Sulfolobus islandicus L.S.2.15] gi|229580503|ref|YP_002838903.1| Uracil-DNA glycosylase superfamily [Sulfolobus islandicus Y.G.57.14] gi|229580849|ref|YP_002839248.1| Uracil-DNA glycosylase superfamily [Sulfolobus islandicus Y.N.15.51] gi|229586024|ref|YP_002844526.1| Uracil-DNA glycosylase superfamily [Sulfolobus islandicus M.16.27] gi|238621009|ref|YP_002915835.1| Uracil-DNA glycosylase superfamily [Sulfolobus islandicus M.16.4] gi|284999102|ref|YP_003420870.1| Uracil-DNA glycosylase superfamily [Sulfolobus islandicus L.D.8.5] gi|227457998|gb|ACP36685.1| Uracil-DNA glycosylase superfamily [Sulfolobus islandicus L.S.2.15] gi|227460613|gb|ACP39299.1| Uracil-DNA glycosylase superfamily [Sulfolobus islandicus M.14.25] gi|228011219|gb|ACP46981.1| Uracil-DNA glycosylase superfamily [Sulfolobus islandicus Y.G.57.14] gi|228011565|gb|ACP47326.1| Uracil-DNA glycosylase superfamily [Sulfolobus islandicus Y.N.15.51] gi|228021074|gb|ACP56481.1| Uracil-DNA glycosylase superfamily [Sulfolobus islandicus M.16.27] gi|238382079|gb|ACR43167.1| Uracil-DNA glycosylase superfamily [Sulfolobus islandicus M.16.4] gi|284446998|gb|ADB88500.1| Uracil-DNA glycosylase superfamily [Sulfolobus islandicus L.D.8.5] Length = 222 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 70/217 (32%), Gaps = 35/217 (16%) Query: 77 LHELKSLLRSFHDCHLC---------STSLSTICATQTEGQDLMIIGYTPSDS-DNISGK 126 + S L S + C + + +++IIG P+ + N +G+ Sbjct: 1 MENFISRLISCNKCPRLTQYRNSFPDNYWKKPVPPNGEINAEIVIIGLAPAANGGNRTGR 60 Query: 127 PFSG-KTGNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSNIEME 172 F+G ++ N L L ++ +I+ PP N + E+ Sbjct: 61 MFTGDESSNNLTNALYAVGFANQPFSISKDDGLKLFRVYITSAVKCAPPQN-KPNKDEII 119 Query: 173 ICRPIIMRQIEL-ISPKILLFIGNKTKNFF------FNNDAQKTYQNLGKWSNLCTPH-S 224 C + ++ + + K+ + G + G + P S Sbjct: 120 NCSTFLEEEVRMLENAKVYIAFGKVAWDSIIYVFKKIGYSVPNVKFYHGALVKVTKPDMS 179 Query: 225 IIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 II + + HP + + T + L+ + K L Sbjct: 180 IIWLIGSYHPSP--RNMKTGRLTMNMLVEIFSTAKKL 214 >gi|257051271|ref|YP_003129104.1| Uracil-DNA glycosylase superfamily [Halorhabdus utahensis DSM 12940] gi|256690034|gb|ACV10371.1| Uracil-DNA glycosylase superfamily [Halorhabdus utahensis DSM 12940] Length = 210 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 59/164 (35%), Gaps = 15/164 (9%) Query: 85 RSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG-KTGNMLDKMLQS 142 +C L + + D++++G P+ + +G PF+G +TG + ++L + Sbjct: 16 EDCTNCPALVESRTQVVHGYGDPTADVIVLGSAPTPGADRTGIPFTGDETGETIQEILGA 75 Query: 143 IEI----------MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192 + + T+++++ ++ H E C ++ I+P++++ Sbjct: 76 VGLSDSPPDTTEPDLTEVYLTYVTRCHHSDRSAT-EEERHNCEGYRTAELRRINPELIVA 134 Query: 193 IGNKTKNFFFNNDAQKTYQNL--GKWSNLCTPHSIIPTLATVHP 234 +G + ++ L L + P Sbjct: 135 VGQEPLEALAFEYTMESADELDVTAEHATTIQGRGFEILPMIEP 178 >gi|330813529|ref|YP_004357768.1| uracil-DNA glycosylase, family 5 [Candidatus Pelagibacter sp. IMCC9063] gi|327486624|gb|AEA81029.1| uracil-DNA glycosylase, family 5 [Candidatus Pelagibacter sp. IMCC9063] Length = 226 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 57/196 (29%), Gaps = 40/196 (20%) Query: 76 SLHELKSLLRSFHDCHL---------CSTSLS---------TICATQTEGQDLMIIGYTP 117 SL L + + C + ++I G P Sbjct: 4 SLDNLNQTITNCSKCPRLVAFRKKISKEKRKQYRNQIYWGKPTPGFGDKKSKIIIFGLAP 63 Query: 118 SDSD-NISGKPFSGKT-GNMLDKMLQSIEIMRT------------QIHISMISPWHPPGN 163 + +G+ F+G G++L K L + I+ + PPG+ Sbjct: 64 AAHGATRTGRVFTGDKSGDLLFKCLYKAGLSNQSTSTDINDGLKLSCFITNVLKCVPPGD 123 Query: 164 RNLSNIEMEICRPIIMRQIELIS-PKILLFIGNKTKNFFFNNDAQKTY-----QNLGKWS 217 E+ C + ++ ++ KIL+ IG + +K G Sbjct: 124 -KPELKELLNCSKFLEGELHILREAKILVTIGKVAFDEILKFYQRKYSLDKKNYIFGHGK 182 Query: 218 NLCTPHSIIPTLATVH 233 P + +++ H Sbjct: 183 KYKLPDGKL-LVSSYH 197 >gi|284164858|ref|YP_003403137.1| uracil-DNA glycosylase-like protein [Haloterrigena turkmenica DSM 5511] gi|284014513|gb|ADB60464.1| Uracil-DNA glycosylase-like protein [Haloterrigena turkmenica DSM 5511] Length = 220 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 28/174 (16%), Positives = 59/174 (33%), Gaps = 25/174 (14%) Query: 85 RSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN--------- 134 +C LC T + D + +G P+ S + G PF+ T + Sbjct: 16 EECRNCPALCETRTQVVHGYGDVDADFLFVGERPTASADAIGVPFAAGTEDGTAADGAES 75 Query: 135 --MLDKMLQSIEIM----------RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQI 182 L +ML+ + + ++++ ++ P ++ E+ C P + +I Sbjct: 76 ETTLRRMLERLGLCDATSPADEPVLENVYLTNLTRCRDPDR-RPTDEEIGNCDPYLNAEI 134 Query: 183 ELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKW--SNLCTPHSIIPTLATVHP 234 +I+P+IL+ +G + +L + V P Sbjct: 135 RMINPEILVPVGERPLRELGVEYTTTPADDLALPDDHARRIRGRGFELVPMVDP 188 >gi|239931906|ref|ZP_04688859.1| hypothetical protein SghaA1_27039 [Streptomyces ghanaensis ATCC 14672] gi|291440276|ref|ZP_06579666.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291343171|gb|EFE70127.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length = 242 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 29/201 (14%), Positives = 59/201 (29%), Gaps = 45/201 (22%) Query: 77 LHELKSLLRSFHDCHL------------------CSTSLSTICATQTEGQDLMIIGYTPS 118 L EL + C + + L+IIG P+ Sbjct: 6 LTELDRRIADCRACPRLVDWREEVARTRRAAFADWTYWGRPVPGFGPPDARLLIIGLAPA 65 Query: 119 DS-DNISGKPFSG-KTGNMLDKMLQS-------------IEIMRTQIHISMISPWHPPGN 163 N +G+ F+G ++G++L + L + + ++ PP Sbjct: 66 AHGGNRTGRMFTGDRSGDVLYRALYDVGLASQPSSVHAGDGLELHGVRVTAPVHCAPP-A 124 Query: 164 RNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLC 220 + E + CRP +++++ L+ P + L +G + + Sbjct: 125 NKPTPEERDTCRPWLVQELHLLRPTVRAALVLGAFGWQAALPAFAGAGWTVPRPRPAFKH 184 Query: 221 TPHSIIP--------TLATVH 233 H +P H Sbjct: 185 GAHVTLPAADGPGLHLFGCYH 205 >gi|295681381|ref|YP_003609955.1| uracil-DNA glycosylase [Burkholderia sp. CCGE1002] gi|295441276|gb|ADG20444.1| Uracil-DNA glycosylase superfamily [Burkholderia sp. CCGE1002] Length = 208 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 63/194 (32%), Gaps = 17/194 (8%) Query: 66 QADSIAQKACSLHELKSLLRSFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNIS 124 ++ SL L +R+ C + + A + ++IIG P + S Sbjct: 4 TTKRTSKHDTSLDTLLHDIRACTLCAPTLPHAPRPVLAA-STRSRILIIGQAPGARVHAS 62 Query: 125 GKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ 181 G P+S +G L L + ++ I + P + C R+ Sbjct: 63 GVPWSDASGARLRTWLGVDDTTFYDASRFAIVPMGFCFPGRGASGDLPPRPECASRWHRE 122 Query: 182 I--ELISPKILLFIGNKTKNFFFNN-DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238 + + S K+ L IG + F + + L +W+ + HP Sbjct: 123 LLARMRSVKLTLLIGQYAQRFGLGDAFGPTSTDTLVRWAEF-----GPRVMPLPHPSP-- 175 Query: 239 QYPLI-KKNTW-HA 250 + K+N W Sbjct: 176 RNVAWFKRNPWFED 189 >gi|90022415|ref|YP_528242.1| 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase [Saccharophagus degradans 2-40] gi|89952015|gb|ABD82030.1| Uracil-DNA glycosylase superfamily [Saccharophagus degradans 2-40] Length = 194 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 58/185 (31%), Gaps = 19/185 (10%) Query: 80 LKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 L + +R DC L + + ++IIG P + SG P+ +G L Sbjct: 11 LINQIRQCRDCEPELPLGARPIV--RGAPNAKILIIGQAPGTKVHASGIPWDDASGRRLR 68 Query: 138 KML---QSIEIMRTQIHISMISPWHPPGNR--NLSNIEMEICRPIIMRQIELISPKILLF 192 + + ++I I + +P R +L + L + ++ L Sbjct: 69 QWMGIDDQAFYDESRIAIMPMGFCYPGKGRSGDLPPRPECAPKWHARMLASLPNIQLTLL 128 Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNT 247 IG + ++ + W + + HP L Q P ++ Sbjct: 129 IGQYAQKYYLKEGFTNLTDTVKHWEDYLPHY-----FPLPHPSPRNQIWLKQNPWFEEIA 183 Query: 248 WHALI 252 L Sbjct: 184 IPELQ 188 >gi|218461847|ref|ZP_03501938.1| probable uracil-DNA glycosylase protein [Rhizobium etli Kim 5] Length = 210 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 64/192 (33%), Gaps = 22/192 (11%) Query: 75 CSLHELKSLLRSFHDC---------HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISG 125 SL L+ + + C H + A + ++I G P + SG Sbjct: 5 ASLETLRREIAACRICRDAPANGPAHRLPHEPRPV-AVISSNAHILIAGQAPGLRVHESG 63 Query: 126 KPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSN-IEMEICRPIIMRQ 181 PF +G+ L L ++ R + I + P + ++ C P ++ Sbjct: 64 LPFDDASGDRLRSWLGVDRASFYDRDRFAIVPMGFCFPGYDDKGADLPPRRECAPFWRQR 123 Query: 182 IELISPKI--LLFIGNKTKNFFFN--NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237 + P+I +L IG + + + T G W + L HP Sbjct: 124 VLSAMPQIELVLVIGQYAQTWHIAGESRGGMTETVRG-WRDSLMSGRSPAVLPLPHPSW- 181 Query: 238 IQYPLI-KKNTW 248 + K+N+W Sbjct: 182 -RNSGWLKRNSW 192 >gi|325983076|ref|YP_004295478.1| Uracil-DNA glycosylase superfamily [Nitrosomonas sp. AL212] gi|325532595|gb|ADZ27316.1| Uracil-DNA glycosylase superfamily [Nitrosomonas sp. AL212] Length = 224 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 57/211 (27%), Gaps = 37/211 (17%) Query: 82 SLLRSFHDCH-LC-----------STSLSTICATQTEGQDLMIIGYTPSDSD-NISGKPF 128 + S C LC + A L+I+G P N +G+PF Sbjct: 11 QAILSCRQCPRLCGFLQAVKDQHPDYHARPVIAFGEAMPKLLIVGLAPGMHGANRTGRPF 70 Query: 129 SGKT-GNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC 174 +G G +L + L + I+ PP N E++ C Sbjct: 71 TGDYAGILLYQTLHRFGLATRNDSISADDGLRLMGCRITNAVKCLPPEN-KPIPQEIKQC 129 Query: 175 RPIIMRQIELISPK---ILLFIGNKTKNFF---FNNDAQKTYQNLGKWSNLC-TPHSIIP 227 + +I +L +G A+ G + + + + Sbjct: 130 NQYLSIEINQFIKSGGIAVLALGTVAHQAVLMSLQLKAKDYPFAHGAVHAVPSSSGNGLR 189 Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKAL 258 + H K+ T + + Sbjct: 190 LYDSYHCS--RYNTQTKRLTAEMFAQVFAQI 218 >gi|108757455|ref|YP_632184.1| hypothetical protein MXAN_4004 [Myxococcus xanthus DK 1622] gi|108461335|gb|ABF86520.1| conserved hypothetical protein [Myxococcus xanthus DK 1622] Length = 377 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 25/176 (14%), Positives = 62/176 (35%), Gaps = 17/176 (9%) Query: 95 TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154 + + E L+++G +P +I+ PF+G G +L+ +L + R+ + Sbjct: 195 AASHSHPRAGAERASLLLVGASP---VDIAEPPFAGSAGALLEVVLGRAGLTRSSRRVVR 251 Query: 155 IS----PWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210 + E CR + + + P++++ +G F + + Sbjct: 252 PCGDGCRSRHGVLPPTARGEGRTCRHGLEGVVAEVRPRMIIALGPVAAQAFLGV-GFRMH 310 Query: 211 QNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT------WHALITLKKALKN 260 + G+ + +AT P+ +++ P + L + L+ Sbjct: 311 LSRGQLLDTRWAEG---WMATFDPEAVLRLPEGRARAEARIHFEADLRSAAAWLRQ 363 >gi|323478627|gb|ADX83865.1| Uracil-DNA glycosylase superfamily [Sulfolobus islandicus HVE10/4] Length = 222 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 70/217 (32%), Gaps = 35/217 (16%) Query: 77 LHELKSLLRSFHDCHLC---------STSLSTICATQTEGQDLMIIGYTPSDS-DNISGK 126 + S L S + C + + +++IIG P+ + N +G+ Sbjct: 1 MENFISRLISCNKCPRLTQYRNSFPDNYWKKPVPPNGEINAEIVIIGLAPAANGGNRTGR 60 Query: 127 PFSG-KTGNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSNIEME 172 F+G ++ N L L ++ +I+ PP N + E+ Sbjct: 61 MFTGDESSNNLTNALYAVGFANQPFSISKDDGLKLFRVYITSAVKCAPPQN-KPNKDEII 119 Query: 173 ICRPIIMRQIEL-ISPKILLFIGNKTKNFF------FNNDAQKTYQNLGKWSNLCTPH-S 224 C + ++ + + K+ + G + G + P S Sbjct: 120 NCSTFLEEEVRILENAKVYIAFGKVAWDSIIYVFKKIGYSVPNVKFYHGALVKVTKPDMS 179 Query: 225 IIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 II + + HP + + T + L+ + K L Sbjct: 180 IIWLIGSYHPSP--RNMKTGRLTMNMLVEIFSTAKKL 214 >gi|290559867|gb|EFD93190.1| phage SPO1 DNA polymerase-related protein [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 106 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 1/93 (1%) Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT 228 E+E CRP ++RQ+ I+P I+L G + + + G+ N+ Sbjct: 12 HEIETCRPYLLRQLNTINPSIILAFG-TSAAASLGLKFKHLSEVRGRKINIKLDDKTFDC 70 Query: 229 LATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 T HP +++P ++ + T KNL Sbjct: 71 FVTFHPSFPMRFPHAREQFLKDIKTCLNIYKNL 103 >gi|237509910|ref|ZP_04522625.1| uracil-DNA glycosylase [Burkholderia pseudomallei MSHR346] gi|254184640|ref|ZP_04891229.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei 1655] gi|184215232|gb|EDU12213.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei 1655] gi|235002115|gb|EEP51539.1| uracil-DNA glycosylase [Burkholderia pseudomallei MSHR346] Length = 224 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 76/221 (34%), Gaps = 21/221 (9%) Query: 53 ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDL 110 ++ R+ SP+ A S + L L +R+ C HL + A G + Sbjct: 1 MSPKRNAPSPVRNSAPSKPTRHARLDALLREIRACSVCAPHLPCGPRPVVRA--HPGARI 58 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLS 167 +I+G P + SG P+ +G L L + + I + +P + Sbjct: 59 LIVGQAPGARVHASGIPWDDASGKRLRAWLNVDDATFYDESLFAIVPMGFCYPGRGASGD 118 Query: 168 NIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHS 224 N C P+ + ++ P ++ L IG + F + T + + W Sbjct: 119 NPPRPECAPLWLDKLLAELPDIRLTLLIGQYAQRRFLGARRKSTLTETVRAWPEYAPEF- 177 Query: 225 IIPTLATVHPQELIQYPLI-KKNTWHA---LITLKKALKNL 261 + HP + K++ W L L+ + L Sbjct: 178 ----IPLPHPSP--RNQGWLKQHPWFDAGVLPALRDRVAEL 212 >gi|289582988|ref|YP_003481454.1| uracil-DNA glycosylase [Natrialba magadii ATCC 43099] gi|289532541|gb|ADD06892.1| Uracil-DNA glycosylase superfamily [Natrialba magadii ATCC 43099] Length = 216 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 57/170 (33%), Gaps = 21/170 (12%) Query: 85 RSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT--GN------- 134 +C LC T + G D + +G P+++ + +G P + G+ Sbjct: 16 EKCRNCPALCETRTQVVHGYGDVGADFLFVGERPTEAADETGIPLVARPAAGDTDTETDL 75 Query: 135 --------MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186 + D + ++++ ++ P ++ E++ C P + +I +I+ Sbjct: 76 RRILERLALCDATSPADRPALENVYLTNLTRCRDPER-PPTDEEIDTCEPYLNAEIRMIN 134 Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLG--KWSNLCTPHSIIPTLATVHP 234 P+IL+ IG + L + + P Sbjct: 135 PEILIPIGERALAELGTEYTTTPADELTLPDAHATTIRGRGFELVPMIDP 184 >gi|126455816|ref|YP_001076735.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei 1106a] gi|242312880|ref|ZP_04811897.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei 1106b] gi|126229584|gb|ABN92997.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei 1106a] gi|242136119|gb|EES22522.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei 1106b] Length = 224 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 76/221 (34%), Gaps = 21/221 (9%) Query: 53 ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDL 110 ++ R+ SP+ A S + L L +R+ C HL + A G + Sbjct: 1 MSPKRNAPSPVRNSAPSKPTRHARLDALLREIRACSVCAPHLPCGPRPVVRA--HPGARI 58 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLS 167 +I+G P + SG P+ +G L L + + I + +P + Sbjct: 59 LIVGQAPGARVHASGIPWDDASGKRLRAWLNVNDATFYDESLFAIVPMGFCYPGRGASGD 118 Query: 168 NIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHS 224 N C P+ + ++ P ++ L IG + F + T + + W Sbjct: 119 NPPRPECAPLWLDKLLAELPDIRLTLLIGQYAQRRFLGARRKSTLTETVRAWPEYAPEF- 177 Query: 225 IIPTLATVHPQELIQYPLI-KKNTWHA---LITLKKALKNL 261 + HP + K++ W L L+ + L Sbjct: 178 ----IPLPHPSP--RNQGWLKQHPWFDADVLPALRDRVAEL 212 >gi|53723012|ref|YP_111997.1| hypothetical protein BPSS1991 [Burkholderia pseudomallei K96243] gi|76817382|ref|YP_336257.1| uracil-DNA glycosylase [Burkholderia pseudomallei 1710b] gi|126443236|ref|YP_001063849.1| uracil-DNA glycosylase [Burkholderia pseudomallei 668] gi|254194419|ref|ZP_04900851.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei S13] gi|254263619|ref|ZP_04954484.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei 1710a] gi|254300917|ref|ZP_04968361.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei 406e] gi|52213426|emb|CAH39469.1| conserved hypothetical protein [Burkholderia pseudomallei K96243] gi|76581855|gb|ABA51329.1| uracil-DNA glycosylase [Burkholderia pseudomallei 1710b] gi|126222727|gb|ABN86232.1| uracil-DNA glycosylase [Burkholderia pseudomallei 668] gi|157810702|gb|EDO87872.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei 406e] gi|169651170|gb|EDS83863.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei S13] gi|254214621|gb|EET04006.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei 1710a] Length = 224 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 76/221 (34%), Gaps = 21/221 (9%) Query: 53 ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDL 110 ++ R+ SP+ A S + L L +R+ C HL + A G + Sbjct: 1 MSPKRNAPSPVRNSAPSKPTRHARLDALLREIRACSVCAPHLPCGPRPVVRA--HPGARI 58 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLS 167 +I+G P + SG P+ +G L L + + I + +P + Sbjct: 59 LIVGQAPGARVHASGIPWDDASGKRLRAWLNVDDATFYDESLFAIVPMGFCYPGRGASGD 118 Query: 168 NIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHS 224 N C P+ + ++ P ++ L IG + F + T + + W Sbjct: 119 NPPRPECAPLWLDKLLAELPDIRLTLLIGQYAQRRFLGARRKSTLTETVRAWPEYAPEF- 177 Query: 225 IIPTLATVHPQELIQYPLI-KKNTWHA---LITLKKALKNL 261 + HP + K++ W L L+ + L Sbjct: 178 ----IPLPHPSP--RNQGWLKQHPWFDADVLPALRDRVAEL 212 >gi|152965047|ref|YP_001360831.1| uracil-DNA glycosylase superfamily [Kineococcus radiotolerans SRS30216] gi|151359564|gb|ABS02567.1| Uracil-DNA glycosylase superfamily [Kineococcus radiotolerans SRS30216] Length = 291 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 30/237 (12%), Positives = 68/237 (28%), Gaps = 46/237 (19%) Query: 40 QRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL-- 97 + + +Q ++A A L EL + C T Sbjct: 23 PSPVPPGSGWPGDPSGPDTPVAHDPEQVRALA--ATDLAELSARAGVCRACPRLVTWRED 80 Query: 98 ----------------STICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKM 139 + + ++++G P+ N +G+ F+G ++G+ + Sbjct: 81 VARTKRRAYREEPYWGRPVPSLGVGDPRVLVVGLAPAAHGGNRTGRMFTGDRSGDWIIAA 140 Query: 140 LQ-------------SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186 L + + + I PP N + E + C + ++ L++ Sbjct: 141 LHRAGLATQATSVHAADGLALRRTRIVAPVRCAPPDN-RPTTGERDTCAAWLDAELALVA 199 Query: 187 --PKILLFIGNKTKNFFFNN--------DAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 +++L +G + G + L P + L + H Sbjct: 200 DGLRVVLALGRFAWGVALGAARRAGWSVPRPQPRFGHGAEAVLEGPAGPVRLLGSYH 256 >gi|320009332|gb|ADW04182.1| Uracil-DNA glycosylase superfamily [Streptomyces flavogriseus ATCC 33331] Length = 265 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 60/226 (26%), Gaps = 46/226 (20%) Query: 55 NIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL----------------- 97 R A + L EL +L+ C Sbjct: 6 PDRGADHDDRGYPARHAPRCSGLGELDALVTRCRACPRLVAWREEVAEVKRAAFQDEEYW 65 Query: 98 -STICATQTEGQDLMIIGYTPSDS-DNISGKPFSGK-TGNMLDKMLQSIEIMRTQIHI-- 152 + + ++G P+ N +G+ F+G G+ L L + I + Sbjct: 66 GRPVPGFGPADATVAVVGLAPAAHGGNRTGRMFTGDAAGDFLFAALHDVGIASQPSSVHP 125 Query: 153 -----------SMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKN 199 + PP + E + CR + +++L+SP ++++ +G Sbjct: 126 GDGLTLRGVRLTSPVHCAPP-ANKPTPGERDTCRAWLSAELDLLSPGLRVVVALGGFGWQ 184 Query: 200 FFF------NNDAQKTYQNLGK----WSNLCTPHSIIPTLATVHPQ 235 + G + L + HP Sbjct: 185 ALLPVLDEAGWRVPRPRPVFGHGAHAVLPATERRQELHLLGSYHPS 230 >gi|182679400|ref|YP_001833546.1| uracil-DNA glycosylase superfamily protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182635283|gb|ACB96057.1| Uracil-DNA glycosylase superfamily [Beijerinckia indica subsp. indica ATCC 9039] Length = 236 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 27/187 (14%), Positives = 55/187 (29%), Gaps = 24/187 (12%) Query: 65 QQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD-NI 123 + S + L +L+ +LR + + L+I+G P N Sbjct: 25 PEPSSNCPQCPRLSDLRHMLRQSE--PGWHNA--PVPTFGDPLGRLLIVGLAPGVRGANR 80 Query: 124 SGKPFSGKT-GNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLSNI 169 +G+PF+G G++L + L + + I+ PP N+ + Sbjct: 81 TGRPFTGDYAGDLLYETLGRFGFTQGTYAAQAQDGLALAECAITNAVRCVPPQNKPTPDE 140 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFF---FNNDAQKTYQNLGKWSNLCTPHSII 226 + + + L+ +G + G W L + Sbjct: 141 INQCRPFLAQTLSAMPRLTALVALGRIAHESVLRALGLKLKDFPFAHGAWHRLPDRNLS- 199 Query: 227 PTLATVH 233 + H Sbjct: 200 -LFDSYH 205 >gi|29832784|ref|NP_827418.1| hypothetical protein SAV_6242 [Streptomyces avermitilis MA-4680] gi|29609905|dbj|BAC73953.1| hypothetical protein [Streptomyces avermitilis MA-4680] Length = 264 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 27/178 (15%), Positives = 61/178 (34%), Gaps = 37/178 (20%) Query: 60 HSPLVQQADSIAQKACSLHELKSLLRSFHDCHL------------------CSTSLSTIC 101 + + +A+ + SL +L + C + + Sbjct: 7 RDSSLAEGGRLAEGS-SLSDLDEHITGCRACPRLVEWREEVARTKRAAFADWTYWGRPVP 65 Query: 102 ATQTEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKMLQ-------------SIEIM 146 L+++G P+ N +G+ F+G ++G++L L + Sbjct: 66 GFGPVDASLLVVGLAPAAHGANRTGRMFTGDRSGDVLYAALHDVGLASRATAVSADDGLE 125 Query: 147 RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFF 202 + I+ PP + E + CRP ++R++EL+ P + ++ +G Sbjct: 126 LYGVRITSPVHCAPP-ANKPTPEERDTCRPWLVRELELLRPTLRAVVVLGAFGWQAAL 182 >gi|253995823|ref|YP_003047887.1| hypothetical protein Mmol_0450 [Methylotenera mobilis JLW8] gi|253982502|gb|ACT47360.1| hypothetical protein Mmol_0450 [Methylotenera mobilis JLW8] Length = 205 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 27/74 (36%), Gaps = 1/74 (1%) Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247 K+LL +G + Q + + +P + T HP L++ K Sbjct: 133 KLLLVMGEAAAHSLLG-QLQGMEDWRSAQAASPIYYQHLPVVITYHPAFLLKNTAYKAQA 191 Query: 248 WHALITLKKALKNL 261 W L K+ L+ L Sbjct: 192 WVDLCAAKRILQGL 205 >gi|149175790|ref|ZP_01854408.1| putative uracil-DNA glycosylase, family 4 [Planctomyces maris DSM 8797] gi|148845237|gb|EDL59582.1| putative uracil-DNA glycosylase, family 4 [Planctomyces maris DSM 8797] Length = 227 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 27/201 (13%), Positives = 58/201 (28%), Gaps = 40/201 (19%) Query: 73 KACSLHELKSLLRSFHDCHL------------------CSTSLSTICATQTEGQDLMIIG 114 ++L + + C + L+I+G Sbjct: 2 SESQWNQLNQNIITCTRCERLLTHCQKIAAEKRKSFRDWDYWGRPVPNFGDSAAQLLIVG 61 Query: 115 YTPSDSD-NISGKPFSG-KTGNMLDKMLQSIEI-------------MRTQIHISMISPWH 159 P+ N +G+ F+G ++G+ L + L I+ Sbjct: 62 LAPAAHGANRTGRMFTGDRSGDWLYRALFKAGFASQPAAEHISDGLTLINCAITATCHCA 121 Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 PP + E+E C P + + ++L+ ++ L +G + + + GK Sbjct: 122 PP-ANKPTREEIENCHPWLEQTVDLLPVQVFLALGQIGWKAVLDFKK-RQGKLTGKRPVF 179 Query: 220 CTP-----HSIIPTLATVHPQ 235 + + HP Sbjct: 180 SHGAEYQFPDGHWLVGSYHPS 200 >gi|167840674|ref|ZP_02467358.1| Uracil DNA glycosylase superfamily superfamily protein [Burkholderia thailandensis MSMB43] Length = 224 Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 39/221 (17%), Positives = 76/221 (34%), Gaps = 21/221 (9%) Query: 53 ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDL 110 + R+ SP+ A + L L +R+ C HL + A + Sbjct: 1 MPPKRNEPSPIRNGARPKPTRHACLDALLREIRACTVCAPHLPCGPRPVVRAD--PSARI 58 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLS 167 +I+G P + SG P++ +G L + L + + I + +P + Sbjct: 59 LIVGQAPGARVHASGIPWNDASGKRLREWLNVDDATFYDESLFAIVPMGFCYPGRGASGD 118 Query: 168 NIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHS 224 N C P+ + ++ P ++ L IG + F + + + + WS Sbjct: 119 NPPRPECAPLWLDKLLGELPDIRLTLLIGQYAQRRFLGARRKPSLTETVRAWSEYAPEF- 177 Query: 225 IIPTLATVHPQELIQYPLI-KKNTWHA---LITLKKALKNL 261 + HP + K++ W L L+ + L Sbjct: 178 ----IPLPHPSP--RNQGWLKQHPWFDAEVLPALRGKVAEL 212 >gi|83858188|ref|ZP_00951710.1| hypothetical protein OA2633_01776 [Oceanicaulis alexandrii HTCC2633] gi|83853011|gb|EAP90863.1| hypothetical protein OA2633_01776 [Oceanicaulis alexandrii HTCC2633] Length = 220 Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 27/193 (13%), Positives = 56/193 (29%), Gaps = 27/193 (13%) Query: 59 IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPS 118 P A A L + + F+ + + E L+++G P Sbjct: 7 PAEPAADCALCPRLVAYRLENVAAEPDWFNG---------AVPSFGDEQARLLVVGLAPG 57 Query: 119 DSD-NISGKPFSGK-TGNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGN 163 N + +PF+G G++L L++ + + I+ PP N Sbjct: 58 RGGANRTARPFTGDWAGDLLYPTLEAFGFSKGRFDPDGNDDLRLVDAMITNAVRCVPPQN 117 Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSNLC 220 + + + R L L+ +G + G ++ Sbjct: 118 KPIGAEMNNCRPFLASRMDALPRLTTLICLGRVSHENTLKALGYKQSAFKFAHGARHDVD 177 Query: 221 TPHSIIPTLATVH 233 P+ + + H Sbjct: 178 GPNGPLALFDSYH 190 >gi|289643514|ref|ZP_06475632.1| Uracil-DNA glycosylase superfamily [Frankia symbiont of Datisca glomerata] gi|289506698|gb|EFD27679.1| Uracil-DNA glycosylase superfamily [Frankia symbiont of Datisca glomerata] Length = 288 Score = 63.6 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 25/183 (13%), Positives = 55/183 (30%), Gaps = 39/183 (21%) Query: 69 SIAQKACSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDL 110 +A A EL + + C + + + Sbjct: 10 RLAASAADTAELDARMSVCRACPRLVDWREEVAQLRRAAFARERYWGRPVPSFGPADARV 69 Query: 111 MIIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQSIEIMRTQ-------------IHISMI 155 +++G P+ N +G+ F+G ++G+ L L + + R I Sbjct: 70 LVVGLAPAAHGGNRTGRIFTGDRSGDWLFASLHRVGLARLPTSLSAGDGQRLISTRIVAA 129 Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFF---FNNDAQKTY 210 PP + +E + C+ ++R +EL+ P + ++ +G Sbjct: 130 VRCAPP-ANKPTTLERDACQGWLIRDLELLRPTLRAIVVLGGFAWTALWPALGRAGHPVP 188 Query: 211 QNL 213 Sbjct: 189 SPR 191 >gi|256371613|ref|YP_003109437.1| Uracil-DNA glycosylase superfamily [Acidimicrobium ferrooxidans DSM 10331] gi|256008197|gb|ACU53764.1| Uracil-DNA glycosylase superfamily [Acidimicrobium ferrooxidans DSM 10331] Length = 215 Score = 63.6 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 29/187 (15%), Positives = 60/187 (32%), Gaps = 28/187 (14%) Query: 74 ACSLHELKSLLRSFHDCHLCSTSLST----------ICATQTEGQDLMIIGYTPSDSDNI 123 A +L +L + + C T + ++++G PS Sbjct: 2 ATALEQLAQDILTCCRCDRLVEWRRTTSQSDWVALPVPGFGDPAARILVVGLAPSRRGAN 61 Query: 124 SG-KPFSGKTG-NMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLSN 168 + + F+G L L + ++ T + +S + PP N Sbjct: 62 AHGRMFTGDPSAAFLTAALWRLGLANQPTSTSRDDGLVLTDVWLSAAARCAPPDN-RPRA 120 Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT 228 E+ CRP ++R++EL+ + + +G + + + Sbjct: 121 GELAACRPYLVRELELVPWRSAVALGAIAWSALAAALGEPLGRFRH--GERIELGRGRLV 178 Query: 229 LATVHPQ 235 LA+ HP Sbjct: 179 LASYHPS 185 >gi|269959592|ref|ZP_06173973.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269835650|gb|EEZ89728.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 190 Score = 63.6 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 69/181 (38%), Gaps = 17/181 (9%) Query: 76 SLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 SL L +R+ C L + + A + ++IIG P + + P++ +G Sbjct: 2 SLETLLKQVRACQICADDLPLGANPVVQA--AKDARILIIGQAPGTRVHKTSIPWNDPSG 59 Query: 134 NMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--K 188 + L + L I +I I + +P + + C P ++I P + Sbjct: 60 DRLRQWLDIDKDIFYDPNKIAIVPMGFCYPGKGNSGDLPPRKECAPAWHKKILEQLPNIE 119 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247 + L IG ++ ++ N + Q + +W + + HP + L KKN Sbjct: 120 LTLLIGQYSQQYYLTNKPKTLTQTVQQWQDWEPDF-----IPLPHPSP--RNTLWLKKNP 172 Query: 248 W 248 W Sbjct: 173 W 173 >gi|223984893|ref|ZP_03634999.1| hypothetical protein HOLDEFILI_02298 [Holdemania filiformis DSM 12042] gi|223963137|gb|EEF67543.1| hypothetical protein HOLDEFILI_02298 [Holdemania filiformis DSM 12042] Length = 201 Score = 63.6 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 56/170 (32%), Gaps = 14/170 (8%) Query: 77 LHELKSLLRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 +LK+ L+ C I + + I PS +G PF+ +G Sbjct: 10 FEQLKTQLQHCRVCENQMKDEPHPIF-QGSLDSKIFQISQAPSRRVMETGLPFNDASGKK 68 Query: 136 LDKMLQSI----EIMRTQIHISMISPWHPPGNRNLSN--IEMEICRPIIMRQIELISPKI 189 L + I +I+ I+ +P + + + +++EL+ P+ Sbjct: 69 LKQEWYQITDEQFYDPRLFYIASIARCYPGKAKGSGDLRPPKHCAELYLRQELELVQPQR 128 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 ++ IG+ + F + + IP HP L + Sbjct: 129 IVLIGSYAAQWLFPELSLED------LIFQTQDFRGIPVFTLPHPSPLNR 172 >gi|84683551|ref|ZP_01011454.1| uracil-DNA glycosylase, putative [Maritimibacter alkaliphilus HTCC2654] gi|84668294|gb|EAQ14761.1| uracil-DNA glycosylase, putative [Rhodobacterales bacterium HTCC2654] Length = 197 Score = 63.6 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 61/195 (31%), Gaps = 22/195 (11%) Query: 80 LKSLLRSFHDCHLCSTSLST-----ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L +R C + +T A L +IG P + SG PF+ +G+ Sbjct: 7 LADQIRKCRICAAAFRATATGHEPRPVAWFDPSARLRVIGQAPGLRVHESGIPFNDPSGD 66 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRN--LSNIEMEICRPIIMRQIELISPKI 189 L + + R +I I+ ++ P + ++P + Sbjct: 67 RLRDWMGVDRDTFYDRARIAITPMAFCFPGYDARGSDLPPPRVCAETWHDAVDATLAPTL 126 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248 L +G + + A T G W + L HP + +KN W Sbjct: 127 TLLVGAYAQRRYLGTRASLTDTVRG-WRDHLPD-----ILPLPHPSW--RNTGWLRKNPW 178 Query: 249 --HALI-TLKKALKN 260 L+ L+ + Sbjct: 179 FEADLLPVLRTRVAE 193 >gi|153006593|ref|YP_001380918.1| uracil-DNA glycosylase superfamily protein [Anaeromyxobacter sp. Fw109-5] gi|152030166|gb|ABS27934.1| Uracil-DNA glycosylase superfamily [Anaeromyxobacter sp. Fw109-5] Length = 186 Score = 63.6 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 53/155 (34%), Gaps = 21/155 (13%) Query: 101 CATQTEGQDLMIIGYTPSDSD-NISGKPFSGK-TGNMLDKMLQ-------------SIEI 145 ++++G P N +G+ F+G +G+ L L + Sbjct: 2 PGFGDPAARIVLLGLAPGAHGANRTGRMFTGDGSGDFLYAALHRAGLASQPLARGVDDGL 61 Query: 146 MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN- 204 + T ++ PP N + E+ C P + R++ + P++++ +G + + Sbjct: 62 VLTGAFVTNACRCAPPDN-RPAPEELARCAPFLDRELAALRPEVIVALGAIAWDAALAHL 120 Query: 205 --DAQKTYQNLGKW-SNLCTPHSIIP-TLATVHPQ 235 + ++ P L + HP Sbjct: 121 ARGGAAVPRPRPRFRHGAELRLEGAPLLLGSYHPS 155 >gi|115375460|ref|ZP_01462720.1| uracil-DNA glycosylase [Stigmatella aurantiaca DW4/3-1] gi|310821379|ref|YP_003953737.1| uracil-DNA glycosylase, family 4 [Stigmatella aurantiaca DW4/3-1] gi|115367503|gb|EAU66478.1| uracil-DNA glycosylase [Stigmatella aurantiaca DW4/3-1] gi|309394451|gb|ADO71910.1| uracil-DNA glycosylase, family 4 [Stigmatella aurantiaca DW4/3-1] Length = 229 Score = 63.6 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 54/196 (27%), Gaps = 41/196 (20%) Query: 77 LHELKSLLRSFHDCHL------------------CSTSLSTICATQTEGQDLMIIGYTPS 118 L L + + C + + L+I+G P+ Sbjct: 4 LEALHAEITQCRACPRLVAWREEVAQVKRRAFQDWTYWGRAVPGFGDPRARLLIVGLAPA 63 Query: 119 DSD-NISGKPFSG-KTGNMLDKMLQSIEIMRTQ-------------IHISMISPWHPPGN 163 N +G+ F+G ++G+ L L +I+ + PP N Sbjct: 64 AHGANRTGRFFTGDRSGDFLMAGLYRAGFANQPLSQHAGDGLKLRGAYITAAARCAPPEN 123 Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF------NNDAQKTYQNLGKWS 217 E+ C P I R++ L+ ++ L +G K + Sbjct: 124 -KPLPGELARCAPFIDRELALLPTRVFLALGAIAWGAALTVLARTGVVLPKPRPVFAHGA 182 Query: 218 NLCTPHSIIPTLATVH 233 P + H Sbjct: 183 EWALPG-GRTLVGCYH 197 >gi|330465821|ref|YP_004403564.1| uracil-DNA glycosylase superfamily protein [Verrucosispora maris AB-18-032] gi|328808792|gb|AEB42964.1| uracil-DNA glycosylase superfamily protein [Verrucosispora maris AB-18-032] Length = 237 Score = 63.6 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 63/206 (30%), Gaps = 46/206 (22%) Query: 71 AQKACSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLMI 112 A +A L +L + + C + + I Sbjct: 5 AARATDLADLDAAVSDCFACPRLVQWREEVARTKRAAFRDQEYWGRPVPGFGDPAARIGI 64 Query: 113 IGYTPSDS-DNISGKPFSG-KTGNMLDKMLQ-------------SIEIMRTQIHISMISP 157 +G P+ N +G+ F+G ++G++L L + I Sbjct: 65 LGLAPAAHGGNRTGRIFTGDRSGDVLFAALHRAGLANQPTSVAADDGLTLRHTRIFAAVR 124 Query: 158 WHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNF-------FFNNDAQK 208 PP N + +E + C P + R++ LI P ++++ +G + A Sbjct: 125 CAPPDN-KPTPVERDTCAPWLHREVALIRPTLRVVVALGAFAWAAWWPVSRDVYGVAAPS 183 Query: 209 TYQNLGKWSNLCTPHSIIP-TLATVH 233 + G + +P L H Sbjct: 184 PRPSFG--HGAHWSGTAVPELLGCYH 207 >gi|190892128|ref|YP_001978670.1| uracil-DNA glycosylase [Rhizobium etli CIAT 652] gi|190697407|gb|ACE91492.1| probable uracil-DNA glycosylase protein [Rhizobium etli CIAT 652] Length = 210 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 61/189 (32%), Gaps = 20/189 (10%) Query: 77 LHELKSLLRSFHDC---HLCSTSLSTI-----CATQTEGQDLMIIGYTPSDSDNISGKPF 128 L L+ + + C + A + ++I G P + SG PF Sbjct: 7 LETLRREIAACRICRDAPAKGPAHRLPQEPRPVAVISSNARILIAGQAPGLRVHESGLPF 66 Query: 129 SGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSN-IEMEICRPIIMRQIEL 184 +G+ L L ++ R + I + P + ++ C P +++ Sbjct: 67 DDASGDRLRSWLGVDRASFYDRDRFAIVPMGFCFPGYDDKGADLPPRRECAPFWRQRVLS 126 Query: 185 ISPKI--LLFIGNKTKNFFFNNDAQKTY--QNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 P+I +L IG + + Q G W + L HP + Sbjct: 127 AMPQIELVLVIGQYAQAWHMAGGGQGGMAETVRG-WRDSLMSGRSPAVLPLPHPSW--RN 183 Query: 241 PLI-KKNTW 248 K+N+W Sbjct: 184 SGWLKRNSW 192 >gi|329890089|ref|ZP_08268432.1| uracil DNA glycosylase superfamily protein [Brevundimonas diminuta ATCC 11568] gi|328845390|gb|EGF94954.1| uracil DNA glycosylase superfamily protein [Brevundimonas diminuta ATCC 11568] Length = 210 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 58/207 (28%), Gaps = 37/207 (17%) Query: 88 HDCHLC--------STSLS-------TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131 DC LC + + L+I G P + N +G+PF+G Sbjct: 7 RDCPLCPRLVAYRAENARQNPDWWNGPAPSFGDPNARLLIAGLAPGRTGANRTGRPFTGD 66 Query: 132 T-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177 G +L L+ I+ PP N+ + E + Sbjct: 67 HAGWLLYDTLKKTGFAKGSYDPDGHDDLTLVDCMITNAVRCAPPQNKPTATEENTCRPFL 126 Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237 + R L K+++ +G+ ++ + + + H L Sbjct: 127 VDRLTALPRLKVIVTLGDVSRRSILRTLGYPGSAIPAG-HGVEGQVGPYTLINSYHCSRL 185 Query: 238 IQYPLIKKNT---WHA-LITLKKALKN 260 + T + K AL+ Sbjct: 186 --NTNTGRLTAEMFEDIFKRAKAALEA 210 >gi|291276600|ref|YP_003516372.1| hypothetical protein HMU03680 [Helicobacter mustelae 12198] gi|290963794|emb|CBG39630.1| Putative hypothetical protein [Helicobacter mustelae 12198] Length = 211 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 29/187 (15%), Positives = 53/187 (28%), Gaps = 12/187 (6%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 + LH L+ + C I ++ + TP P + Sbjct: 37 DQKEDLHSLRQKILHCRFCERSKI-QEPIFGILNTAARVVFVTPTPILDAKNQFLP-NRS 94 Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191 + D + + I + E C+ Q++ + ++L Sbjct: 95 ARMLQDILTNVFGFDAREYGILSLLKCADTPITK---EEFLQCQLHFFAQLQKMPHAMVL 151 Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251 G + GK L L T +L++ P +K+ T L Sbjct: 152 CFGG---KEALDFFDLLDQNFFGKLIKLRDQ----RFLITYSLLDLLKNPSLKRETMQHL 204 Query: 252 ITLKKAL 258 LK+AL Sbjct: 205 SLLKEAL 211 >gi|116695781|ref|YP_841357.1| Uracil-DNA glycosylase [Ralstonia eutropha H16] gi|113530280|emb|CAJ96627.1| Uracil-dna glycosylase [Ralstonia eutropha H16] Length = 205 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 36/198 (18%), Positives = 73/198 (36%), Gaps = 19/198 (9%) Query: 75 CSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 SL L + +R+ C HL + ++I+G P + +G P++ + Sbjct: 7 ASLDALLTEVRACRACAPHLPLGPRPIV--RVGADARILIVGQAPGIRVHETGIPWNDAS 64 Query: 133 GNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189 G+ L + L + + +Q I + +P ++ N C P+ + ++ P I Sbjct: 65 GDRLRQWLGVDAATFLDESQFAIIPMGFCYPGRGKSGDNPPRRECAPLWLDRLLAQLPSI 124 Query: 190 --LLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKN 246 L +G + F + T + + W + + HP P K++ Sbjct: 125 ELTLLVGQYAQRHFLGARRKPTLTETVRAWKDYAPGF-----VPLPHPSP-RNQPWFKQH 178 Query: 247 TW-HA--LITLKKALKNL 261 W L L++ + L Sbjct: 179 PWFEDEVLPMLRERVGRL 196 >gi|156972577|ref|YP_001443484.1| uracil-DNA glycosylase [Vibrio harveyi ATCC BAA-1116] gi|156524171|gb|ABU69257.1| hypothetical protein VIBHAR_00217 [Vibrio harveyi ATCC BAA-1116] Length = 190 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 68/181 (37%), Gaps = 17/181 (9%) Query: 76 SLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 SL L +R+ C L + + A + ++IIG P + + P++ +G Sbjct: 2 SLETLLKQVRACQICADDLPLGANPVVQA--AKDARILIIGQAPGTRVHKTSIPWNDPSG 59 Query: 134 NMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--K 188 + L + L +I I + +P + + C P ++I P + Sbjct: 60 DRLRQWLDIDKDTFYDPNKIAIVPMGFCYPGKGNSGDLPPRKECAPAWHKKILDQLPNIE 119 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247 + L IG ++ ++ N + Q + +W + + HP + L KKN Sbjct: 120 LTLLIGLYSQQYYLTNKPKTLTQTVQQWQDWEPDF-----IPLPHPSP--RNTLWLKKNP 172 Query: 248 W 248 W Sbjct: 173 W 173 >gi|126739939|ref|ZP_01755630.1| uracil-DNA glycosylase, putative [Roseobacter sp. SK209-2-6] gi|126719171|gb|EBA15882.1| uracil-DNA glycosylase, putative [Roseobacter sp. SK209-2-6] Length = 204 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 60/198 (30%), Gaps = 24/198 (12%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLS------TICATQTEGQDLMIIGYTPSDSDNISGKPF 128 SL +L + S C + + + +++ G P + SGKPF Sbjct: 6 KSLKDLSQSISSCRLCQSRFAATHSAHEPRPVVWL-SSTASILVSGQAPGARVHASGKPF 64 Query: 129 SGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNL---SNIEMEICRPIIMRQI 182 + +G L + + + ++ + ++ P N + Sbjct: 65 TDPSGERLRQWMGVSDAEFYDLKKVAVLPLAFCFPGYNAKGSDLPPPPLCARTWHAQVMQ 124 Query: 183 ELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL 242 E+ + ++ L +G + + + W N HP + Sbjct: 125 EMPNLRLKLLVGGYAQKWHLGTKQSV-TDCVASWRNAPEG-----VFPLPHPSW--RNTG 176 Query: 243 I-KKNTW--HALITLKKA 257 KKN W L+ + + Sbjct: 177 WLKKNPWFEEELLPVLQK 194 >gi|242129248|gb|ACS83697.1| uracil-DNA glycosylase superfamily [uncultured bacterium AOCefta2] Length = 280 Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 63/178 (35%), Gaps = 28/178 (15%) Query: 81 KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDK 138 + R F DC + + +++IG P+ N +G+ F+G ++G+ L + Sbjct: 81 REKTRRFRDCEYWG---RPVPSFGVATARMLVIGLAPAAHGGNRTGRIFTGDRSGDWLFR 137 Query: 139 MLQSIEIMRTQ-------------IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELI 185 L I+ + PP N +E+E CRP + + +L+ Sbjct: 138 ALHKAGFANQPQSVSVDDGLALKDCFIAATARCAPPDNT-PLPVELENCRPYLTAEADLL 196 Query: 186 SP--KILLFIGNKTKNFFF------NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 P K ++ +G ++ + + + ++ L + HP Sbjct: 197 WPQLKAVVPLGGIAFAWWLNYLKGRGLNLGRPLPRFAHLAEFAFENAP-SVLCSFHPS 253 >gi|15899448|ref|NP_344053.1| hypothetical protein SSO2733 [Sulfolobus solfataricus P2] gi|284174306|ref|ZP_06388275.1| hypothetical protein Ssol98_06557 [Sulfolobus solfataricus 98/2] gi|13816058|gb|AAK42843.1| Conserved hypothetical protein [Sulfolobus solfataricus P2] gi|261601217|gb|ACX90820.1| Uracil-DNA glycosylase superfamily [Sulfolobus solfataricus 98/2] Length = 219 Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 69/210 (32%), Gaps = 35/210 (16%) Query: 77 LHELKSLLRSFHDCHLC---------STSLSTICATQTEGQDLMIIGYTP-SDSDNISGK 126 + S L + C + + +++I+G P + N +G+ Sbjct: 1 MENFISRLIACDKCPRLTQYRKSFPDNYWKKPVPPNGQIDAEIVIVGLAPAGNGGNRTGR 60 Query: 127 PFSG-KTGNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSNIEME 172 F+G ++ N L L ++ + +I+ PP N + E+ Sbjct: 61 MFTGDESSNNLANALYAVGLSNQPFSVSKDDGLKLFNVYITSAVKCAPPQN-KPNKDEII 119 Query: 173 ICRPIIMRQIELISP-KILLFIGNKTKNFF------FNNDAQKTYQNLGKWSNLCTPH-S 224 C + ++ ++ K+ + +G + + G + P S Sbjct: 120 NCSVFLEEEVRILKNTKVYIALGKIAWDSLIYVFKKIGYNVPNVRFYHGALVKVVKPDMS 179 Query: 225 IIPTLATVHPQELIQYPLIKKNTWHALITL 254 II + + HP + + T + LI + Sbjct: 180 IIWLVGSYHPSP--RNMKTGRLTINMLIEI 207 >gi|170693255|ref|ZP_02884415.1| Uracil-DNA glycosylase superfamily [Burkholderia graminis C4D1M] gi|170141785|gb|EDT09953.1| Uracil-DNA glycosylase superfamily [Burkholderia graminis C4D1M] Length = 194 Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 32/193 (16%), Positives = 64/193 (33%), Gaps = 21/193 (10%) Query: 77 LHELKSLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 L +L S +RS C + + A + ++I+G P + SG P+S +G Sbjct: 2 LDKLLSDIRSCTLCASKLPHAPRPVLAA-SAQARILIVGQAPGARVHASGIPWSDASGTR 60 Query: 136 LDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELI--SPKIL 190 L L + ++ I + +P R+ C P +++ + ++ Sbjct: 61 LRAWLGVDDATFYDDSKFAIVPVGFCYPGRGRSGDLPPRPECAPRWHQELLQHLGAVRLT 120 Query: 191 LFIGNKTKNFFFNN-DAQKTYQNLGKWSNLCTPHSIIPTLATVHP-----QELIQYPLIK 244 L +G + F + L +W + HP + P + Sbjct: 121 LLVGQYAQQFGLGDARGPTLTDTLTRWQEY-----GPRVMPLPHPSPRNIAWFKRNPWFE 175 Query: 245 KNTWHALITLKKA 257 + L L+ Sbjct: 176 ADV---LPALRAR 185 >gi|222480403|ref|YP_002566640.1| hypothetical protein Hlac_1992 [Halorubrum lacusprofundi ATCC 49239] gi|222453305|gb|ACM57570.1| conserved hypothetical protein [Halorubrum lacusprofundi ATCC 49239] Length = 211 Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 57/164 (34%), Gaps = 15/164 (9%) Query: 86 SFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK-TGNMLDKMLQSI 143 +C LC + G + +++G PS + +G PF+G G + + + Sbjct: 17 DCENCPELCGPRDRVVHGYGDVGGEFLVVGTRPSATAEANGIPFTGAGAGERVQSIFADL 76 Query: 144 EIMR----------TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 +R I + ++ P ++ E+E C P + +I +I+P+I++ + Sbjct: 77 GFVRSAPDATEPDVQNIFFTNLTRCRHPKRE-PTDREVETCEPFLNAEIRMINPQIIVPV 135 Query: 194 GNKTKN--FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 G + + ++ + P Sbjct: 136 GERPLRELAVAYTTRRPDSFDIDAEHATTIRGRGFELVPMKEPS 179 >gi|90413400|ref|ZP_01221393.1| hypothetical protein P3TCK_13406 [Photobacterium profundum 3TCK] gi|90325642|gb|EAS42111.1| hypothetical protein P3TCK_13406 [Photobacterium profundum 3TCK] Length = 195 Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 62/181 (34%), Gaps = 13/181 (7%) Query: 74 ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 A L+ + +R C + LMIIG P + +G P++ +G Sbjct: 2 AKHLNNILDQIRHCEICKDHLLAGPRPIIQAHSQAKLMIIGQAPGTKVHETGIPWNDPSG 61 Query: 134 NMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK-- 188 L + L QI I + +P ++ C Q+ + P Sbjct: 62 ERLRRWLDLDSETFYNPQQIAIMPMGLCYPGKGKSGDLPPRPECATQWHHQVLPLLPNIG 121 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247 + L IG +N++ NN + + + W + + HP + L KKN Sbjct: 122 MTLVIGQYAQNYYLNNKPKTLTETVRAWRQWAPRY-----IPMPHPSP--RNTLWLKKNP 174 Query: 248 W 248 W Sbjct: 175 W 175 >gi|221635602|ref|YP_002523478.1| uracil-DNA glycosylase superfamily [Thermomicrobium roseum DSM 5159] gi|221157426|gb|ACM06544.1| uracil-DNA glycosylase superfamily [Thermomicrobium roseum DSM 5159] Length = 251 Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 30/211 (14%), Positives = 65/211 (30%), Gaps = 53/211 (25%) Query: 77 LHELKSLLRSFHDCHLC------------------STSLSTICATQTEGQDLMIIGYTPS 118 L L + + C + ++++G P+ Sbjct: 8 LSALAQRIVACAACPRLVAYRAAVAQAKRRAYRDEDYWGKPVPGFGDPQARVIVVGLAPA 67 Query: 119 DS-DNISGKPFSGK-TGNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGN 163 N +G+ F+G +G+ L + L + + + +I+ PP N Sbjct: 68 AHGGNRTGRMFTGDASGDFLYRALYRVGLANQPVSRQRGDGLALREAYITAACRCAPPDN 127 Query: 164 RNLSNIEMEICRPIIMRQIE-LISPKILLFIGNKTKNFFF--------------NNDAQK 208 + E+ CRP ++ ++ L ++L+ +G A Sbjct: 128 -RPTREELARCRPYLVEELGLLEQAQVLVCLGQIAFEAALAALRELGAGQPEPVGEVATP 186 Query: 209 TYQNLG----KWSNLCTPHSIIPTLATVHPQ 235 + +W L +S + +A+ HP Sbjct: 187 RPRFRHGALYRWPALPWRNSTLWLIASYHPS 217 >gi|241205032|ref|YP_002976128.1| uracil-DNA glycosylase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858922|gb|ACS56589.1| uracil-DNA glycosylase protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 210 Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 59/188 (31%), Gaps = 18/188 (9%) Query: 77 LHELKSLLRSFHDCHLC--STSLSTICATQTE------GQDLMIIGYTPSDSDNISGKPF 128 L L+ + S C + ++I G P + SG PF Sbjct: 7 LEMLRQEIGSCRICRDAPGKGLEHRLPHEPRPVVVISSNARILIAGQAPGLRVHESGLPF 66 Query: 129 SGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSN-IEMEICRPIIMRQIEL 184 +G+ L L ++ R + I + P + ++ C P +++ Sbjct: 67 DDASGDRLRSWLGVDRASFYDRDRFAIVPMGFCFPGYDDKGADLPPRRECAPFWRQRVIS 126 Query: 185 ISPKI--LLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241 P+I +L IG + + + + W + + L HP + Sbjct: 127 AMPQIELVLVIGQYAQAWHMAGERRDNMTETVRAWRDCFLSNRSPAVLPLPHPSW--RNS 184 Query: 242 LI-KKNTW 248 K+N W Sbjct: 185 GWLKRNPW 192 >gi|90961081|ref|YP_534997.1| Uracil DNA glycosylase superfamily protein [Lactobacillus salivarius UCC118] gi|90820275|gb|ABD98914.1| Uracil DNA glycosylase superfamily protein [Lactobacillus salivarius UCC118] Length = 198 Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 21/168 (12%), Positives = 49/168 (29%), Gaps = 18/168 (10%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 ++I+G P + ++ +G+ L L + I P Sbjct: 36 NPKAKILIVGQAPGQKAQDTHMVWNDLSGDRLRTWLDVSRDEFYNSDLFAIMPMDFYFPG 95 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + + + + ++ + +G+ + N + K +++ Sbjct: 96 KGKGGDLPPRKNFAAKWHPKLRKLMPNIELTILVGSYAVKKYLNLKSSA------KLTDI 149 Query: 220 CTPHSII--PTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKN 260 + VHP L + P +K L L +KN Sbjct: 150 VKDYQTYLPEYFPLVHPSPRNLIWLKKNPWFEKQVVKDLQKLVSEIKN 197 >gi|54310493|ref|YP_131513.1| hypothetical protein PBPRA3427 [Photobacterium profundum SS9] gi|46914936|emb|CAG21711.1| conserved hypothetical protein [Photobacterium profundum SS9] Length = 197 Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 61/184 (33%), Gaps = 14/184 (7%) Query: 74 ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 A L + +R C + LMIIG P + +G P++ +G Sbjct: 2 AQHLDNVLDQIRRCEICKDHLIAGPRPIIQAHSQARLMIIGQAPGTKVHETGIPWNDPSG 61 Query: 134 NMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK-- 188 L + L QI I + +P ++ C P Q+ + P Sbjct: 62 ERLRRWLDLDSETFYDPQQIAIMPMGLCYPGKGKSGDLPPRPECAPQWHHQVLPLLPNIG 121 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247 + L IG +N++ NN + + + W + + HP + KKN Sbjct: 122 MTLVIGQYAQNYYLNNKPKTLTETVRAWRQWAPRY-----IPLPHPSP--RNTQWLKKNP 174 Query: 248 W-HA 250 W Sbjct: 175 WFED 178 >gi|228952007|ref|ZP_04114102.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228807539|gb|EEM54063.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 155 Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 16/125 (12%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 E M++G P +++ +G PFSG+ G L L+ I++ R +++I+ P Sbjct: 26 GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMDFLERIDVTREEVYITSAVRSRPY 85 Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 NR + E+ P++ ++E I PK+++ +GN Sbjct: 86 KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKIHPKLIVTLGNIGLQRLTGKK 145 Query: 206 AQKTY 210 Q Sbjct: 146 KQSQM 150 >gi|86136543|ref|ZP_01055122.1| uracil-DNA glycosylase, putative [Roseobacter sp. MED193] gi|85827417|gb|EAQ47613.1| uracil-DNA glycosylase, putative [Roseobacter sp. MED193] Length = 196 Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 34/199 (17%), Positives = 57/199 (28%), Gaps = 25/199 (12%) Query: 79 ELKSLLRSFHDCHLCSTSLST-----ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 +L + C + T A ++I G P + SGKPF+ +G Sbjct: 5 QLCEAITQCRICTDRFAATHTGHQPRPVAWFDASARILIAGQAPGLRVHESGKPFTDPSG 64 Query: 134 NMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLS--NIEMEICRPIIMR-QIELISP 187 + L L ++ R ++ I + P N S + R L + Sbjct: 65 DRLRDWLGLDETAFYDRKRVAIVPMGFCFPGYNARNSDLPPPPICAKTWRDRVMQSLPNI 124 Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPL 242 + L IG + F + HP L + P Sbjct: 125 ALTLAIGAPAQAFHLGGKVPVGQRV------AAWRDHAPRVFPLPHPSWRNTGWLKRNPW 178 Query: 243 IKKNTWHALITLKKALKNL 261 + L L+ +K L Sbjct: 179 FEAEL---LPVLRGRVKEL 194 >gi|77361963|ref|YP_341537.1| putative uracil-DNA glycosylase family protein [Pseudoalteromonas haloplanktis TAC125] gi|76876874|emb|CAI89091.1| putative uracil-DNA glycosylase family protein [Pseudoalteromonas haloplanktis TAC125] Length = 200 Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 37/198 (18%), Positives = 70/198 (35%), Gaps = 21/198 (10%) Query: 76 SLHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 L+EL + + C L + I ++I G P + SG PF+ ++G Sbjct: 10 ELNELVAQVSKCVICEPQLPLGARPVI--QFNPNARILIAGQAPGIKVHQSGIPFNDQSG 67 Query: 134 NMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--K 188 L + L I I + +P ++ + C P Q+ P + Sbjct: 68 ERLRQWLGLTNDQFYDANNIAILPMGFCYPGKGKSGDLPPRKECAPAWRAQLLAALPNLQ 127 Query: 189 ILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKN 246 + + +G + + + + + W + H ++P HP + + KKN Sbjct: 128 LTIVLGKYAQAYHLPDTKKLPLTELVKSWRDYWPSHLVLP-----HPSP--RNNIWLKKN 180 Query: 247 TW---HALITLKKALKNL 261 W L LKK + + Sbjct: 181 PWFEQEVLPELKKRVAEV 198 >gi|170702698|ref|ZP_02893561.1| Uracil-DNA glycosylase superfamily [Burkholderia ambifaria IOP40-10] gi|170132400|gb|EDT00865.1| Uracil-DNA glycosylase superfamily [Burkholderia ambifaria IOP40-10] Length = 199 Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 57/185 (30%), Gaps = 22/185 (11%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + +R+ C L + A ++I+G P + SG P+ +G Sbjct: 9 LDVLLTEIRACRACEADLPLGPRPVVRA--HRDARILIVGQAPGARVHASGIPWDDASGK 66 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIELISP 187 L L T+ I + +P G+ + ++ ++ I Sbjct: 67 RLRDWLGVDADTFYDETRFAIVPMGFCYPGRGASGDNPPRPECAPLWIDWLLAELPSI-- 124 Query: 188 KILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KK 245 ++ L IG + F + + W + L HP + K Sbjct: 125 RLTLLIGQYAQRHFLRDTRKATLTDTVHAWRDY-----GPDVLPLPHPSP--RNQAWFKH 177 Query: 246 NTWHA 250 + W Sbjct: 178 HPWFD 182 >gi|296283786|ref|ZP_06861784.1| hypothetical protein CbatJ_09196 [Citromicrobium bathyomarinum JL354] Length = 271 Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 33/259 (12%), Positives = 73/259 (28%), Gaps = 29/259 (11%) Query: 9 QEQILTIALFYADSGV-YWVFDEPNNE------------ATYESQRKEKSIDSAIQPITN 55 +E ++AD+GV V D P+ A + S P Sbjct: 12 REAFAASLDWWADAGVLEHVEDAPSGWLKEAEGKGDAQAAQSDRATDAPSAPPPPPPPPP 71 Query: 56 IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLST------ICATQTEGQD 109 R S + A + L +F + S +L + Sbjct: 72 NRTALSRFIASGSDGAAHPGDPAQWPDDLDAFRAWWMESDALDPPGSYPRVAPRGPAQAQ 131 Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI 169 +M++ P+ D + ML+++ + + + P + Sbjct: 132 VMLLVDQPAGED-----LLGEPAAILAANMLRAMGYASDAAYFASVLP-RHTLRPEWDAV 185 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 + + L+ P ++ +G + ++ + + + + P Sbjct: 186 GRAGYGKLAQHHVALVRPAQVIVLGERVW-SLLAHEMAQEDKA---LTTISHGGGKAPVF 241 Query: 230 ATVHPQELIQYPLIKKNTW 248 A L++ P + TW Sbjct: 242 AMPDFASLLRSPAKRAQTW 260 >gi|153835062|ref|ZP_01987729.1| uracil DNA glycosylase superfamily [Vibrio harveyi HY01] gi|148868458|gb|EDL67564.1| uracil DNA glycosylase superfamily [Vibrio harveyi HY01] Length = 190 Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 68/181 (37%), Gaps = 17/181 (9%) Query: 76 SLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 SL L +R+ C L + + A + ++IIG P + + P++ +G Sbjct: 2 SLETLLKQVRTCQICADDLPLGANPVVQA--AKDARILIIGQAPGTRVHKTSIPWNDPSG 59 Query: 134 NMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--K 188 + L + L +I I + +P + + C P ++I P + Sbjct: 60 DRLRQWLDIDKDTFYDPNKIAIVPMGFCYPGKGNSGDLPPRKECAPAWHKKILDQLPNIE 119 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247 + L IG ++ ++ N + Q + +W + + HP + L KKN Sbjct: 120 LTLLIGLYSQQYYLTNKPKTLTQTVQQWQDWEPDF-----IPLPHPSP--RNTLWLKKNP 172 Query: 248 W 248 W Sbjct: 173 W 173 >gi|332969349|gb|EGK08374.1| hypothetical protein HMPREF0476_1386 [Kingella kingae ATCC 23330] Length = 252 Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 37/270 (13%), Positives = 82/270 (30%), Gaps = 34/270 (12%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60 M R + + L + + + A ++ S + + Sbjct: 1 MLDTRYIHLHEALGLGAMWL-----------HQNAKILGKQPAFSAPTRAPETAKQPALR 49 Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI----------CATQTEGQDL 110 + + S L L + T + Sbjct: 50 DTAQPTTSRKSNEPPSFDALDRLRHQTQAKEKAEAEKQVVKTAAAPIPFAVPMPTRMARV 109 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170 M + S D + + FS + G +L KM +I + + +H + N + Sbjct: 110 MALSVCASMPDIVHKRLFSEQDGELLHKMFAAINLQPSDVHCTTWLKNFDNFNPKPDLNQ 169 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230 ++ P + + + LL +G + ++ Q + L + P Sbjct: 170 VQADAPQVQAEWQQCGQPPLLLLGEFFER---DDVQQCLRETLPRAHYFIIP-------- 218 Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALKN 260 HP ++++P +K++ W+ L L+K L + Sbjct: 219 --HPLRILKHPELKRDAWNGLQKLQKRLND 246 >gi|209549670|ref|YP_002281587.1| uracil-DNA glycosylase protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535426|gb|ACI55361.1| putative uracil-DNA glycosylase protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 210 Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 32/193 (16%), Positives = 62/193 (32%), Gaps = 26/193 (13%) Query: 77 LHELKSLLRSFHDC----------HL-CSTSLSTICATQTEGQDLMIIGYTPSDSDNISG 125 L L+ + S C L + ++ ++I G P + SG Sbjct: 7 LEILRLEIASCRICRDAPAKGLAYPLPHEPRPVAVISS---SARILIAGQAPGLRVHESG 63 Query: 126 KPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSN-IEMEICRPIIMRQ 181 PF +G+ L L ++ R + I + P + ++ C P ++ Sbjct: 64 LPFDDASGDRLRSWLGVDRASFYDRDRFAIVPMGFCFPGYDDKGADLPPRRECAPFWRQR 123 Query: 182 IELISPKI--LLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ--- 235 + P+I +L IG + + + + W + + L HP Sbjct: 124 VIAAMPQIELVLVIGQYAQAWHMEGERRGNMTETVRAWRDALLSNRSPAVLPLPHPSWRN 183 Query: 236 --ELIQYPLIKKN 246 L + P +K Sbjct: 184 SGWLKRNPWFEKE 196 >gi|218672996|ref|ZP_03522665.1| phage SPO1 DNA polymerase-related protein [Rhizobium etli GR56] Length = 121 Score = 62.5 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 41/104 (39%), Gaps = 10/104 (9%) Query: 163 NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP 222 ++ + E++ CR + ++ L+ PK+++ +G + + GK + Sbjct: 20 HQKPNMGEVKHCRWWLDLELSLVKPKLIVAMGATALAALTDVKGRLQ-DVRGKAMAIEA- 77 Query: 223 HSIIPTLATVHPQELIQYPLIK------KNTWHALITLKKALKN 260 TVHP L++ P + ++ +++ +K Sbjct: 78 --GRTLFVTVHPSYLLRIPDERLKAEEMARFREDMLKIQRLMKA 119 >gi|258655397|ref|YP_003204553.1| uracil-DNA glycosylase superfamily [Nakamurella multipartita DSM 44233] gi|258558622|gb|ACV81564.1| Uracil-DNA glycosylase superfamily [Nakamurella multipartita DSM 44233] Length = 240 Score = 62.5 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 61/206 (29%), Gaps = 45/206 (21%) Query: 72 QKACSLHELKSLLRSFHDCHL-------------CSTSLST-----ICATQTEGQDLMII 113 + +L EL + C + T + L+I+ Sbjct: 4 AQIPTLAELDRTIAGCRACPRLVEWREEVARVKRAAFRDQTYWGRGVPGLGPADARLLIV 63 Query: 114 GYTPSDSD-NISGKPFSG-KTGNMLDKMLQSIEIMRTQI-------------HISMISPW 158 G P+ N +G+ F+G ++G++L L + I+ Sbjct: 64 GLAPAAHGANRTGRMFTGDRSGDVLFAALHRCGLASQPTSTHRGDGLTLRGVRITAPVHC 123 Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFF------NNDAQKTY 210 PP N + E+ C + R++ L++P +++L +G + Sbjct: 124 APPDN-RPTPTEIATCSAYLRRELALMAPTVRVVLTLGAIGWQAMLRVLIADGWPMPRPR 182 Query: 211 QNLGKWSNL---CTPHSIIPTLATVH 233 G + + L H Sbjct: 183 PPFGHGREVALSHPDGRRLTLLGCYH 208 >gi|16126323|ref|NP_420887.1| hypothetical protein CC_2084 [Caulobacter crescentus CB15] gi|221235103|ref|YP_002517539.1| uracil DNA glycosylase superfamily protein [Caulobacter crescentus NA1000] gi|13423565|gb|AAK24055.1| conserved hypothetical protein [Caulobacter crescentus CB15] gi|220964275|gb|ACL95631.1| uracil DNA glycosylase superfamily protein [Caulobacter crescentus NA1000] Length = 194 Score = 62.5 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 27/180 (15%), Positives = 56/180 (31%), Gaps = 15/180 (8%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L L S + + C + L+I G P + +G PF+ +G L Sbjct: 3 LDALLSEISACRACAPYLPHTPRPVTRVSTATRLLIAGQAPGRIVHETGLPFNDPSGVRL 62 Query: 137 DKML---QSIEIMRTQIHISMISPWHPPGNRN---LSNIEMEICRPIIMRQIELISPKIL 190 + + + R++I ++ ++ P N L + ++ Sbjct: 63 RQWMGIDRETFYGRSEIGVAAMAFCFPGTNPKGGDYPPPPRCAALWRSQLLAALPNVELT 122 Query: 191 LFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248 L +G + + + + + +W L HP + K+N W Sbjct: 123 LLVGRYAQEWALDGRTGKTMTETIERWREF-----GPNVLPLPHPSW--RNTAWLKRNPW 175 >gi|330444946|ref|ZP_08308600.1| uracil DNA glycosylase superfamily protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328493064|dbj|GAA03097.1| uracil DNA glycosylase superfamily protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 195 Score = 62.5 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 17/181 (9%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L+ L++ C I + L++IG P + +G PF+ +G+ L Sbjct: 4 FDNLRDLIKRCEICKDHLEPRPVI--QFSPNAKLLLIGQAPGLKVHQTGIPFNDPSGDRL 61 Query: 137 DKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK--ILL 191 + L+ I I + +P + C P + + + P + L Sbjct: 62 RQWLELDKDTFYNPEHIAIMPMGLCYPGKGKTGDLPPRPECAPQWHQSVLDLMPNIGMTL 121 Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKN 246 IG +N++ N + + + W + + HP L + P + + Sbjct: 122 LIGQYAQNYYLPNKPKTLTETVQHWQQWAPRY-----IPLPHPSPRNAIWLKKNPWFEAD 176 Query: 247 T 247 Sbjct: 177 V 177 >gi|269956443|ref|YP_003326232.1| Uracil-DNA glycosylase superfamily [Xylanimonas cellulosilytica DSM 15894] gi|269305124|gb|ACZ30674.1| Uracil-DNA glycosylase superfamily [Xylanimonas cellulosilytica DSM 15894] Length = 299 Score = 62.5 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 66/212 (31%), Gaps = 45/212 (21%) Query: 68 DSIAQKACSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQD 109 + A +A L EL SLL C + + Sbjct: 26 PTGAARARDLAELGSLLVECRACPRLVEWREAAAANPRAAFRGQTYWARPVPGFGDDAAR 85 Query: 110 LMIIGYTPSDSD-NISGKPFSG-KTGNMLDKMLQ-------------SIEIMRTQIHISM 154 + ++G P+ N +G+ F+G ++G+ L L ++ T + + Sbjct: 86 IAVVGLAPAADGANRTGRLFTGDRSGDFLFAALHRVGLANQPEATSSDDGMVLTGVRLVA 145 Query: 155 ISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFN---NDAQKT 209 PP + E C P + R++EL+ P ++++ +G Sbjct: 146 PVRCAPP-ANKPTPEERRRCGPWLARELELLGPGVRVVVALGAIGWAAALRTLEEQGWPV 204 Query: 210 YQNLGKW-SNL-----CTPHSIIPTLATVHPQ 235 Q ++ + + L + HP Sbjct: 205 PQPRPRFAHDAAVPLERPDGGTVTLLGSFHPS 236 >gi|74316721|ref|YP_314461.1| hypothetical protein Tbd_0703 [Thiobacillus denitrificans ATCC 25259] gi|74056216|gb|AAZ96656.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC 25259] Length = 207 Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 26/177 (14%), Positives = 47/177 (26%), Gaps = 29/177 (16%) Query: 85 RSFHDCHLCST------------SLSTICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131 + C +T + L+I+G P N SG+PF+G Sbjct: 5 ANCRACPRLATFLDEVRGRHPDYHARPVPPFGDAAPRLLIVGLAPGMHGANRSGRPFTGD 64 Query: 132 T-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177 G +L + L T I+ PP E+ C Sbjct: 65 HAGILLYETLHRFGYASAPASRARDDGLQLTGCRITNAVKCLPP-ANKPEPGEIRACNGY 123 Query: 178 IMRQIEL-ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 + +I +L +G K ++ + +++ H Sbjct: 124 LAAEIAGLPGGATILALGQIAHQAVLRAQGLKLKDYPFTHASDYALPGGLRLVSSYH 180 >gi|262068223|ref|ZP_06027835.1| DNA polymerase, bacteriophage-type [Fusobacterium periodonticum ATCC 33693] gi|291378091|gb|EFE85609.1| DNA polymerase, bacteriophage-type [Fusobacterium periodonticum ATCC 33693] Length = 195 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 68/190 (35%), Gaps = 12/190 (6%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 ELK L S L D++ IG P K + +G L Sbjct: 8 WEELKFELGSVGIETLPKDKQEVYIGMGNRNADILFIGNDPKLYLAEDYKVETQSSGEFL 67 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 K+ I+ +I+ ++ +N + E +I ++ QI LISPKI++F+G + Sbjct: 68 IKIFDYAGIVPEAYYITTLTK-REVKIKNFDDEEKKILLDLLNMQIALISPKIVVFLGKE 126 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIKKNT-----WH 249 N + GK+ I T + I + KK+ W+ Sbjct: 127 VAQMI-ENREVDLEKERGKFKKWKGD---IECYLTYDVETAIKARNETGKKSAVATNFWN 182 Query: 250 ALITLKKALK 259 + +K+ L Sbjct: 183 DIKNIKERLD 192 >gi|256394362|ref|YP_003115926.1| uracil-DNA glycosylase superfamily [Catenulispora acidiphila DSM 44928] gi|256360588|gb|ACU74085.1| Uracil-DNA glycosylase superfamily [Catenulispora acidiphila DSM 44928] Length = 244 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 64/198 (32%), Gaps = 36/198 (18%) Query: 66 QADSIAQKACSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEG 107 A A L + +L C I Sbjct: 3 PPSEQAPAASDLAAMDRVLCDCRACPRLVAWREEVGRVKRKAFAEQTYWSRPIPGFGPAD 62 Query: 108 QDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQSIEIMRTQIHI------------- 152 L+I+G P+ N +G+ F+G ++G++L + L ++ + + Sbjct: 63 ARLLIVGLAPAAHGGNRTGRMFTGDRSGDILVEALHALGLANQPTSVSATDGLELLGVRF 122 Query: 153 SMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQKTY 210 + PP N + E + CRP ++R++EL+ P + ++ +G F A Sbjct: 123 TAPVHCAPPDN-KPTPEERDTCRPWLVRELELMRPSVRAMVVLGAFGWQALFPAIAAAGS 181 Query: 211 QNLGKWSNLCTPHSIIPT 228 + K + + Sbjct: 182 WTVPKPRPVFGHGVRVEL 199 >gi|189024056|ref|YP_001934824.1| hypothetical protein BAbS19_I08290 [Brucella abortus S19] gi|260545438|ref|ZP_05821179.1| conserved hypothetical protein [Brucella abortus NCTC 8038] gi|189019628|gb|ACD72350.1| hypothetical protein BAbS19_I08290 [Brucella abortus S19] gi|260096845|gb|EEW80720.1| conserved hypothetical protein [Brucella abortus NCTC 8038] Length = 220 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 26/195 (13%), Positives = 60/195 (30%), Gaps = 20/195 (10%) Query: 77 LHELKSLLRSFHDC---HL----CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129 L EL+ +++ C L + +C + I G P + + PF+ Sbjct: 4 LDELRHSIQACRLCRDTPLFPPPLPHEPNPVCIISDT-ARIAICGQAPGIRVHNTSLPFN 62 Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEICRPIIMRQIE 183 +G+ L + L + ++ I + + +L Sbjct: 63 DPSGDRLRQWLGVTREEFYDASRFAIVPMGFCFPGYDKNGGDLPPRRECRQTWHDRVFAA 122 Query: 184 LISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNL--CTPHSIIPTLATVHPQELIQY 240 + + +L +G + + + + + W + H+ L HP + Sbjct: 123 MPQLEFILVVGQYALAYHLPDYRGRNLTETVKNWRHFMETPSHTGRIALPLPHPSW--RN 180 Query: 241 PLI-KKNTWHALITL 254 K+N W + + Sbjct: 181 SGWLKRNPWFDMEVV 195 >gi|170738143|ref|YP_001779403.1| uracil-DNA glycosylase superfamily protein [Burkholderia cenocepacia MC0-3] gi|169820331|gb|ACA94913.1| Uracil-DNA glycosylase superfamily [Burkholderia cenocepacia MC0-3] Length = 199 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 64/197 (32%), Gaps = 21/197 (10%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + +R+ C L + A ++I+G P + SG P+ +G Sbjct: 9 LDVLLTEIRACRACEADLPLGPRPVVRA--HRDARILIVGQAPGARVHASGIPWDDASGK 66 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189 L L T+ I + +P + N C P+ M ++ P ++ Sbjct: 67 RLRGWLGVDADTFYDETRFAIVPMGFCYPGRGASGDNPPRPECAPLWMDRLLAELPSVRL 126 Query: 190 LLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247 L IG + F + W + L HP + K + Sbjct: 127 TLLIGQYAQRHFLRGARKATLTDTVQTWRDY-----GPAILPLPHPSP--RNQAWFKHHP 179 Query: 248 WHA---LITLKKALKNL 261 W + L++ + +L Sbjct: 180 WFDAEVVPELRRRIASL 196 >gi|330835236|ref|YP_004409964.1| uracil-DNA glycosylase superfamily protein [Metallosphaera cuprina Ar-4] gi|329567375|gb|AEB95480.1| uracil-DNA glycosylase superfamily protein [Metallosphaera cuprina Ar-4] Length = 216 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 27/206 (13%), Positives = 65/206 (31%), Gaps = 39/206 (18%) Query: 75 CSLHELKSLLRSFHDCHLCST----------------SLSTICATQTEGQDLMIIGYTPS 118 + L++ L + C + + + L+I+G P+ Sbjct: 2 NDISFLENRLINCDLCKRLRSFSEYVARFDKRYDEQYWGKPVPGFGDKNAVLLILGLAPA 61 Query: 119 DS-DNISGKPFSG-KTGNMLDKML-------------QSIEIMRTQIHISMISPWHPPGN 163 N +G+PF+G ++G + K L ++ ++ ++++ PP N Sbjct: 62 AHGGNRTGRPFTGDESGKWVIKGLYELGLSNLKEGKNRNDGLVLKHVYLTNAVSCAPPEN 121 Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC-TP 222 + + L + + +L +G + ++ +L Sbjct: 122 KVNMKEIKNCSTNLKFTIEALSNLRSILTLGQVAFRAL-----EIVLNFREQFRHLNVIK 176 Query: 223 HSIIPTLATVHPQELIQYPLIKKNTW 248 +++ HP L K +W Sbjct: 177 VCGKYVISSYHPSPL--NTRTGKLSW 200 >gi|328951159|ref|YP_004368494.1| Uracil-DNA glycosylase superfamily [Marinithermus hydrothermalis DSM 14884] gi|328451483|gb|AEB12384.1| Uracil-DNA glycosylase superfamily [Marinithermus hydrothermalis DSM 14884] Length = 223 Score = 62.1 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 31/219 (14%), Positives = 59/219 (26%), Gaps = 43/219 (19%) Query: 80 LKSLLRSFHDCHL------------------CSTSLSTICATQTEGQDLMIIGYTPSDSD 121 L + L C + + ++I G P Sbjct: 7 LHAELERCARCPRLVAWREAVGRAKRRAFRDWTYWARPVPGFGDPNARILIFGLAPGAHG 66 Query: 122 -NISGKPFSGK-TGNMLDKMLQS-------------IEIMRTQIHISMISPWHPPGNRNL 166 N +G+PF+G +G L L + ++++ PP N Sbjct: 67 SNRTGRPFTGDASGAFLYPALWRAGLANQPRATHRGDGLELYGVYVTAAVRCVPPQN-RP 125 Query: 167 SNIEMEICRPIIMRQIE-LISPKILLFIGNKTKNFFF---NNDAQKTYQNLGKWSNLCTP 222 + E+ C R++E L ++++ +G + + G L Sbjct: 126 TQAELRACADWTRRELELLPKVRVVVALGRIAHDAMLAHFGLKKRAHPFAHGTEHRLPNG 185 Query: 223 HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 L + H Q + T + K L Sbjct: 186 WV---LLDSYHVS--RQNTNTGRLTVEMFDRVLARAKRL 219 >gi|163803948|ref|ZP_02197778.1| hypothetical protein 1103602000441_AND4_18823 [Vibrio sp. AND4] gi|159172249|gb|EDP57149.1| hypothetical protein AND4_18823 [Vibrio sp. AND4] Length = 190 Score = 62.1 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 70/181 (38%), Gaps = 17/181 (9%) Query: 76 SLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 SL L +R+ C L + + A + ++IIG P + + P++ +G Sbjct: 2 SLEILLEQVRACQICADDLPLGANPVVQA--AKDARVLIIGQAPGTRVHKTSIPWNDPSG 59 Query: 134 NMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--K 188 + L + L + +I I + +P + + C P ++I + P + Sbjct: 60 DRLRQWLDIDKDVFYNPNKIAIIPMGFCYPGKGNSGDLPPRKECAPAWHKKILDLLPNIE 119 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247 + L IG ++ ++ N + Q + +W + + HP + L KKN Sbjct: 120 LTLLIGQYSQQYYLTNKPKTLTQTVQQWQDWEPDF-----IPLPHPSP--RNTLWLKKNP 172 Query: 248 W 248 W Sbjct: 173 W 173 >gi|62289815|ref|YP_221608.1| hypothetical protein BruAb1_0881 [Brucella abortus bv. 1 str. 9-941] gi|237815300|ref|ZP_04594298.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|254697253|ref|ZP_05159081.1| hypothetical protein Babob28_05934 [Brucella abortus bv. 2 str. 86/8/59] gi|254730152|ref|ZP_05188730.1| hypothetical protein Babob42_02864 [Brucella abortus bv. 4 str. 292] gi|260757841|ref|ZP_05870189.1| uracil-DNA glycosylase [Brucella abortus bv. 4 str. 292] gi|260761664|ref|ZP_05874007.1| uracil-DNA glycosylase [Brucella abortus bv. 2 str. 86/8/59] gi|62195947|gb|AAX74247.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941] gi|237790137|gb|EEP64347.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|260668159|gb|EEX55099.1| uracil-DNA glycosylase [Brucella abortus bv. 4 str. 292] gi|260672096|gb|EEX58917.1| uracil-DNA glycosylase [Brucella abortus bv. 2 str. 86/8/59] Length = 223 Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 26/195 (13%), Positives = 60/195 (30%), Gaps = 20/195 (10%) Query: 77 LHELKSLLRSFHDC---HL----CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129 L EL+ +++ C L + +C + I G P + + PF+ Sbjct: 7 LDELRHSIQACRLCRDTPLFPPPLPHEPNPVCIISDT-ARIAICGQAPGIRVHNTSLPFN 65 Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEICRPIIMRQIE 183 +G+ L + L + ++ I + + +L Sbjct: 66 DPSGDRLRQWLGVTREEFYDASRFAIVPMGFCFPGYDKNGGDLPPRRECRQTWHDRVFAA 125 Query: 184 LISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNL--CTPHSIIPTLATVHPQELIQY 240 + + +L +G + + + + + W + H+ L HP + Sbjct: 126 MPQLEFILVVGQYALAYHLPDYRGRNLTETVKNWRHFMETPSHTGRIALPLPHPSW--RN 183 Query: 241 PLI-KKNTWHALITL 254 K+N W + + Sbjct: 184 SGWLKRNPWFDMEVV 198 >gi|158319881|ref|YP_001512388.1| uracil-DNA glycosylase superfamily protein [Alkaliphilus oremlandii OhILAs] gi|158140080|gb|ABW18392.1| Uracil-DNA glycosylase superfamily [Alkaliphilus oremlandii OhILAs] Length = 199 Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 55/168 (32%), Gaps = 14/168 (8%) Query: 77 LHELKSLLRSFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 L L++ + C + +M IG PS + +G+PF+ +G Sbjct: 10 LTVLQNQILQCRLCQDTFGFEPQPVI-QGNRRSKIMQIGQAPSKKVHETGRPFNDASGKK 68 Query: 136 LDKML----QSIEIMRTQIHISMISPWHPPGNRNLSNIEM--EICRPIIMRQIELISPKI 189 L + +I I+ +P N + + +++EL+ +I Sbjct: 69 LRNEWYCISEEDFYNPDNFYIGSIAHCYPGKNPKGGDRRPPKVCAEQWLRKELELVENEI 128 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237 + IG FFF + + + + L HP L Sbjct: 129 YILIGGFAAEFFFPGEKLSSL----VFEDRIINGKTAYILP--HPSPL 170 >gi|237808532|ref|YP_002892972.1| hypothetical protein Tola_1776 [Tolumonas auensis DSM 9187] gi|237500793|gb|ACQ93386.1| conserved hypothetical protein [Tolumonas auensis DSM 9187] Length = 197 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 58/182 (31%), Gaps = 22/182 (12%) Query: 80 LKSLLRSFHDCHLCSTSLSTICA-----TQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L+SLL C LC + ++I G P + +G PF+ +G+ Sbjct: 4 LESLLTDVRACTLC--AKHLPLGPHPVLQMQASAQILIAGQAPGRKVHETGIPFNDASGD 61 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR--QIELISPKI 189 L L + + +QI I + P ++ C P L + K+ Sbjct: 62 RLRSWLGISREVFYDASQIAILPMGFCFPGTGKSGDLPPRPECAPAWRAPLLSHLKNLKL 121 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIK 244 L IG + N+ + + W + HP L + P + Sbjct: 122 ALVIGQYAMAYHLPNETGTLTEIVQSWHKYWPH-----IVPLPHPSPRNNFWLKRNPWFE 176 Query: 245 KN 246 K Sbjct: 177 KE 178 >gi|53802756|ref|YP_115479.1| uracil-DNA glycosylase [Methylococcus capsulatus str. Bath] gi|53756517|gb|AAU90808.1| uracil-DNA glycosylase [Methylococcus capsulatus str. Bath] Length = 184 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 52/133 (39%), Gaps = 11/133 (8%) Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM----RTQIHISMISPWHPPGNRN-- 165 ++G P + G+PF+ G + + +I + R +++++ + P N Sbjct: 17 LVGQAPGAKEGALGRPFAWTAGRTMFRWFANIGLDEETFRERVYMAAVCRCFPGKNPKGG 76 Query: 166 ---LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP 222 + E+E C + +++L+ P +++ +G + F + +GK + Sbjct: 77 DRVPAPQEIERCSVWLRTELDLLRPALIIPVGKLAASRFL--TFGQLGDVVGKRHRVELG 134 Query: 223 HSIIPTLATVHPQ 235 + HP Sbjct: 135 GVRTDLIPLPHPS 147 >gi|95930487|ref|ZP_01313223.1| Uracil-DNA glycosylase superfamily [Desulfuromonas acetoxidans DSM 684] gi|95133527|gb|EAT15190.1| Uracil-DNA glycosylase superfamily [Desulfuromonas acetoxidans DSM 684] Length = 225 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 59/219 (26%), Gaps = 41/219 (18%) Query: 80 LKSLLRSFHDCHL----------CSTS------LSTICATQTEGQDLMIIGYTPSDSD-N 122 L L+ C + + ++G P N Sbjct: 8 LPELI-DCQRCPRLMDYLATLPPKGGRSRDDYWNRPVPGFGDINARIWLVGLAPGAHGAN 66 Query: 123 ISGKPFSGK-TGNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGNRNLSN 168 + +PF+G G+ + +L + ++IS PPGN Sbjct: 67 RTARPFTGDGAGDFMYPLLYQAGLSNQAESESCDDGLRLNDLYISNAVKCVPPGN-KPLA 125 Query: 169 IEMEICRPIIMRQIEL-ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH---- 223 E CR ++R+ + S +++L +G + Q+ Sbjct: 126 EEFHQCRDYLLREWKQLTSVRVILALGRDAFISVLHLLKQQGMIKRLADFPFAHNACFEL 185 Query: 224 -SIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + LA H + T + + + L Sbjct: 186 TNGQYLLACYHTS--RYNVQTGRMTEALFLEVLNRARQL 222 >gi|89075371|ref|ZP_01161793.1| hypothetical protein SKA34_16480 [Photobacterium sp. SKA34] gi|89048920|gb|EAR54489.1| hypothetical protein SKA34_16480 [Photobacterium sp. SKA34] Length = 195 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 63/183 (34%), Gaps = 21/183 (11%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTIC---ATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 + L+ L+ C + + L++IG P + +G PF+ Sbjct: 2 KQVDNLRDLIHHCEICK-----DHLVPRPVIQFSSKTRLLLIGQAPGLKVHQTGIPFNDP 56 Query: 132 TGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188 +G+ L + L + I I + +P + C P + + + P Sbjct: 57 SGDRLRQWLGLDKDTFYNPEHIAIMPMGLCYPGKGKTGDLPPRPECAPQWHQPVLDLMPN 116 Query: 189 --ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KK 245 + L IG +N++ + + + + +W + + HP + + KK Sbjct: 117 IGMTLLIGQYAQNYYLRDKPKTLTETVKQWQQWAPRY-----IPLPHPSP--RNAIWLKK 169 Query: 246 NTW 248 N W Sbjct: 170 NPW 172 >gi|116252523|ref|YP_768361.1| hypothetical protein RL2777 [Rhizobium leguminosarum bv. viciae 3841] gi|115257171|emb|CAK08266.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 210 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 59/191 (30%), Gaps = 22/191 (11%) Query: 77 LHELKSLLRSFHDCH---------LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127 L L+ + C + A + ++I G P + SG P Sbjct: 7 LETLRREIACCRICRDAPAKGLEYRLPHEPRPV-AVISSSARILIAGQAPGLRVHESGLP 65 Query: 128 FSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSN-IEMEICRPIIMRQIE 183 F +G+ L L ++ R + I + P + ++ C P +++ Sbjct: 66 FDDASGDRLRSWLGVDRASFYDRDRFAIVPMGFCFPGYDDKGADLPPRRECAPFWRQRVI 125 Query: 184 LISPKI--LLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ----- 235 P+I +L IG + + + + W + L HP Sbjct: 126 SAMPQIELVLVIGQYAQAWHMAGERRDNMTETVRAWRDCLLSDRSPVVLPLPHPSWRNSG 185 Query: 236 ELIQYPLIKKN 246 L + P +K Sbjct: 186 WLKRNPWFEKE 196 >gi|114320517|ref|YP_742200.1| uracil-DNA glycosylase superfamily protein [Alkalilimnicola ehrlichii MLHE-1] gi|114226911|gb|ABI56710.1| Uracil-DNA glycosylase superfamily [Alkalilimnicola ehrlichii MLHE-1] Length = 214 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 24/177 (13%), Positives = 51/177 (28%), Gaps = 31/177 (17%) Query: 86 SFHDCHLCST------------SLSTICATQTEGQDLMIIGYTPSDSDNISG-KPFSGKT 132 C + + + L+++G P + +PF+G Sbjct: 10 HCRRCPRLAAFLDQVAADHPAYHARPVPSFGDPAARLLVVGLAPGMHGANASGRPFTGDH 69 Query: 133 -GNMLDKMLQSIEIM-------------RTQIHISMISPWHPPGNRNLSNIEMEICRPII 178 G +L + L + I+ PPGN + E+ C P + Sbjct: 70 AGILLYRTLHACGFANQPNGDHPEDGLVLHDCRITNAVRCLPPGN-KPNRQEVRNCLPYL 128 Query: 179 MRQIELISPKILLF-IGNKTKNF-FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 ++ + P ++ +G D + ++ + I L + H Sbjct: 129 RYELSSLGPGGVVLALGRVAHEAVLLAEDERLSHHPFAHGAEHPLAGGRI-LLDSYH 184 >gi|159184965|ref|NP_354866.2| hypothetical protein Atu1886 [Agrobacterium tumefaciens str. C58] gi|159140243|gb|AAK87651.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 208 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 28/189 (14%), Positives = 53/189 (28%), Gaps = 20/189 (10%) Query: 77 LHELKSLLRSFHDC---HLCSTSLSTICATQTE------GQDLMIIGYTPSDSDNISGKP 127 L L+ + C L + ++I G P + +G P Sbjct: 6 LDCLRGEIARCRLCRDAPLK-GVTDRLPHEPRPVVVISTKARILIAGQAPGLRVHETGIP 64 Query: 128 FSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNL---SNIEMEICRPIIMRQ 181 F+ +G L + L + + I + P + Sbjct: 65 FNDASGERLRQWLDVDRETFYDPERFAIVPMGFCFPGYDDKGSDLPPRRECAPLWRERVM 124 Query: 182 IELISPKILLFIGNKTKNFFFNNDAQK-TYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 + +++L +G + F K + + W + +S L HP + Sbjct: 125 AAMPQVELILAVGQYAQAFHLGERRHKTMTETVENWRSYLHANSGPGILPLPHPSW--RN 182 Query: 241 PLI-KKNTW 248 KKN W Sbjct: 183 TGWLKKNPW 191 >gi|284042256|ref|YP_003392596.1| uracil-DNA glycosylase-like protein [Conexibacter woesei DSM 14684] gi|283946477|gb|ADB49221.1| Uracil-DNA glycosylase-like protein [Conexibacter woesei DSM 14684] Length = 218 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 73/214 (34%), Gaps = 10/214 (4%) Query: 50 IQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD 109 + + + + + + L++L L+S C + + + D Sbjct: 10 ASNLPESMPVTTDDEIREKYLERAIRELNQLTRELQSCPHCPRGNLM--PVLGSGHPQAD 67 Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI 169 + +I Y P S+ G F G+ G L K L+ ++I ++ ++ Sbjct: 68 VFMIKYQPRPSEVEEGVAFYGRAGGALMKSLKRLQIDPLAVYGTLCVKCPVSDPTLADPA 127 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 +E ++ ++ PKI++ +G + + N+ + L + H Sbjct: 128 CVERIV----EELAIVQPKIVVVMGEEALH-VVNDLDIPLARELEQVPGA-IQHLTPSVD 181 Query: 230 ATVHPQ--ELIQYPLIKKNTWHALITLKKALKNL 261 A P E + K+ W A L +L Sbjct: 182 ALYVPNIDEALDEEGAKRAFWRAFKVLGDWYADL 215 >gi|227892387|ref|ZP_04010192.1| uracil DNA glycosylase superfamily protein [Lactobacillus salivarius ATCC 11741] gi|227865794|gb|EEJ73215.1| uracil DNA glycosylase superfamily protein [Lactobacillus salivarius ATCC 11741] Length = 198 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 20/168 (11%), Positives = 49/168 (29%), Gaps = 18/168 (10%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 ++I+G P + ++ +G+ L L + I P Sbjct: 36 NPKAKILIVGQAPGQKAQDTHMVWNDLSGDRLRTWLDVSRDEFYNSDLFAIMPMDFYFPG 95 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + + + + ++ + +G+ + N + K +++ Sbjct: 96 KGKGGDLPPRKNFAAKWHPKLRKLMPNIELTILVGSYAVKKYLNLKSSA------KLTDI 149 Query: 220 CTPHSII--PTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKN 260 + VHP L + P ++ L L +KN Sbjct: 150 VKDYQTYLPEYFPLVHPSPRNLIWLKKNPWFEEQVVKDLQKLVSEIKN 197 >gi|302530220|ref|ZP_07282562.1| uracil-DNA glycosylase [Streptomyces sp. AA4] gi|302439115|gb|EFL10931.1| uracil-DNA glycosylase [Streptomyces sp. AA4] Length = 227 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 26/197 (13%), Positives = 52/197 (26%), Gaps = 39/197 (19%) Query: 75 CSLHELKSLLRSFHDCHLCSTSL-----------------STICATQTEGQDLMIIGYTP 117 + L + L C + E L ++G P Sbjct: 2 RTFAGLDAQLVQCRACPRLVAWREGVAGTKAAFAGERYWARPVPGFGAEDAALAVVGLAP 61 Query: 118 SDSD-NISGKPFSGKT-GNMLDKMLQS-------------IEIMRTQIHISMISPWHPPG 162 S N +G+ F+G G+ L ++L + + PP Sbjct: 62 SAHGANRTGRMFTGDPSGDFLFRVLYEVGLASQPVSAAIGDGLTLRGTRLVSPVRCAPPE 121 Query: 163 NRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNN-DAQKTYQNLGKW--- 216 N + E + CR + +++L+ P + ++ +G A + Sbjct: 122 N-KPTPAERDTCRHWLADELDLLRPTLRSIVVLGAFGWQALLPVLSAAGWPVPRPRPAFA 180 Query: 217 SNLCTPHSIIPTLATVH 233 + H Sbjct: 181 HGARVQFGDLAVFGCYH 197 >gi|254716970|ref|ZP_05178781.1| hypothetical protein BcetM_11214 [Brucella ceti M13/05/1] Length = 209 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 26/195 (13%), Positives = 60/195 (30%), Gaps = 20/195 (10%) Query: 77 LHELKSLLRSFHDC---HL----CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129 L EL+ +++ C L + +C + I G P + + PF+ Sbjct: 3 LDELRHSIQACRLCRDTPLFPPPLPHEPNPVCIISDT-ARIAICGQAPGIRVHNTSLPFN 61 Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEICRPIIMRQIE 183 +G+ L + L + ++ I + + +L Sbjct: 62 DPSGDRLRQWLGVTREEFYDASRFAIVPMGFCFPGYDKNGGDLPPRRECRQTWHDRVFAA 121 Query: 184 LISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNL--CTPHSIIPTLATVHPQELIQY 240 + + +L +G + + + + + W + H+ L HP + Sbjct: 122 MPQLEFILVVGQYALAYHLPDYRGRNLTETVKNWRHFMETPSHTGRIALPLPHPSW--RN 179 Query: 241 PLI-KKNTWHALITL 254 K+N W + + Sbjct: 180 SGWLKRNPWFDMEVV 194 >gi|222086247|ref|YP_002544779.1| uracil-DNA glycosylase protein [Agrobacterium radiobacter K84] gi|221723695|gb|ACM26851.1| uracil-DNA glycosylase protein [Agrobacterium radiobacter K84] Length = 209 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 28/210 (13%), Positives = 60/210 (28%), Gaps = 29/210 (13%) Query: 75 CSLHELKSLLRSFHDCHL-----------CSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123 L L+ + C + + ++I G P + Sbjct: 4 DELQALRDAIALCRICRDTPMRGEAYRLPHEPRPVAVLSE---TARILIAGQAPGLRVHE 60 Query: 124 SGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEICRPI 177 SG PF+ +G+ L + L + + I + + +L + Sbjct: 61 SGLPFNDASGDRLRQWLGVGRDSFYNPDRFAIVPMGFCFPGYDTAGSDLPPRKECAPLWR 120 Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQ-KTYQNLGKWSNLCTPHSIIPTLATVHPQ- 235 + +++L IG + + + + +W + L HP Sbjct: 121 QRTLEAMPQIELVLAIGQYAQAWHLGAARMASMTETVSEWRRYLLTNRSPAILPLPHPSW 180 Query: 236 ----ELIQYPLIKKNTWHALITLKKALKNL 261 L + P + L L++ +K L Sbjct: 181 RNSGWLKRNPWFEAEL---LPVLQERVKIL 207 >gi|313898532|ref|ZP_07832069.1| uracil-DNA glycosylase, family 4 [Clostridium sp. HGF2] gi|312956914|gb|EFR38545.1| uracil-DNA glycosylase, family 4 [Clostridium sp. HGF2] Length = 194 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 55/166 (33%), Gaps = 11/166 (6%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 +LK L + C + ++M I PS + SG PF +G L Sbjct: 6 FEQLKRELCACRLCEGKFDHEPRAIFQGAQDANIMQISQAPSIHVHNSGLPFHDASGKKL 65 Query: 137 DKMLQ----SIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC-RPIIMRQIELISPKILL 191 + + +I+ + +P + IC R +MR+++ + ++ + Sbjct: 66 RREWYQIDDAQFYDEHNFYIASMGHCYPGKGKQGDKKPPRICARTWLMRELDAVDNQLYI 125 Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237 IG F + + + + P L HP L Sbjct: 126 IIGAMAAKELFPERSFEEL----VFHDQQLRGK--PALVLPHPSPL 165 >gi|220935077|ref|YP_002513976.1| hypothetical protein Tgr7_1908 [Thioalkalivibrio sp. HL-EbGR7] gi|219996387|gb|ACL72989.1| conserved hypothetical protein [Thioalkalivibrio sp. HL-EbGR7] Length = 218 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 23/202 (11%), Positives = 50/202 (24%), Gaps = 30/202 (14%) Query: 86 SFHDCH-----LCSTSLS-------TICATQTEGQDLMIIGYTPSDSDNISG-KPFSGKT 132 C L + L+I+G P + +PF+G Sbjct: 8 HCTRCPRLSGFLADLRQKHPGYHNAPVAPFGDPEARLLIVGLAPGMHGANASGRPFTGDY 67 Query: 133 -GNMLDKMLQSIEIM-------------RTQIHISMISPWHPPGNRNLSNIEMEICRPII 178 G +L + L + I+ PP N+ + + + Sbjct: 68 AGILLYETLHRFGFASRPESVSADDGLVLSDCRITNAVKCLPPANKPETGEVVCCNDYLA 127 Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238 + L ++L +G N K + + + + H Sbjct: 128 VELRGLPRDAVVLALGTIAHNAVLRALGIKASAHRFG-HGAEHELDGLTLIDSYHCS--R 184 Query: 239 QYPLIKKNTWHALITLKKALKN 260 ++ T + ++ Sbjct: 185 YNTQTRRLTPEMFQAVFARIRE 206 >gi|167647292|ref|YP_001684955.1| uracil-DNA glycosylase superfamily protein [Caulobacter sp. K31] gi|167349722|gb|ABZ72457.1| Uracil-DNA glycosylase superfamily [Caulobacter sp. K31] Length = 195 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 63/186 (33%), Gaps = 22/186 (11%) Query: 77 LHELKSLLRSFHDC--HLCSTSLSTI-CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 L L + +R+ C HL T + ++I G P + +G PF+ +G Sbjct: 3 LDVLLTDIRACRACAPHLPHTPRPVVRVGEG---TRILICGQAPGRLVHETGLPFNDPSG 59 Query: 134 NMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ---IELISP 187 N L + + R +I ++ ++ P N + ++ RQ L Sbjct: 60 NRLRDWMGIDRETFYGRLEIGVAAMAFCFPGTNPKGGDYPPPARCALLWRQPLLAALPKV 119 Query: 188 KILLFIGNKTKNFFFNND-AQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYP 241 ++ L +G+ + + N+ + W + L HP L + P Sbjct: 120 ELTLLVGSHAQAWALNSRMKANMTDTVAAWRDFIDEG----VLPLPHPSWRNTGWLKRNP 175 Query: 242 LIKKNT 247 + Sbjct: 176 WFEAEV 181 >gi|329850760|ref|ZP_08265605.1| uracil DNA glycosylase superfamily protein [Asticcacaulis biprosthecum C19] gi|328841075|gb|EGF90646.1| uracil DNA glycosylase superfamily protein [Asticcacaulis biprosthecum C19] Length = 220 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 24/176 (13%), Positives = 48/176 (27%), Gaps = 28/176 (15%) Query: 85 RSFHDCHLC-----------STSLS-TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131 C T + L+I+G P + N +G+ F+G Sbjct: 6 SDCRLCPRLVDYRDSNRSTEPTWHNAPAPPFGDRNGRLLIVGLAPGRTGANRTGRVFTGD 65 Query: 132 -TGNMLDKMLQSIEIM-------------RTQIHISMISPWHPPGNRNLSNIEMEICRPI 177 G ML + L + ++ PPGN+ L E + Sbjct: 66 AAGRMLFETLIATGFASGTYRDDGHDDVVLRDCLVTNAVLCAPPGNKPLPAEETTCRPHL 125 Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 + K+++ +G+ + + G + + + H Sbjct: 126 AALIKSMPRLKVIVTLGDVARRNLLKALGKPGSAMTGG-HGATAEFDGVRVINSFH 180 >gi|260753798|ref|YP_003226691.1| uracil-DNA glycosylase superfamily [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258553161|gb|ACV76107.1| Uracil-DNA glycosylase superfamily [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 245 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 29/238 (12%), Positives = 63/238 (26%), Gaps = 21/238 (8%) Query: 38 ESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL 97 +S +K ++ + +P + L L+ L+ H + Sbjct: 6 QSADFQKKYPNSKKDNKENSLSIAPQESMPERDCPLCPRLASLRHDLQKEH--PDWFNA- 62 Query: 98 STICATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEIMRTQI----- 150 + + L I+G P N +G+PF+G G +L + L + Sbjct: 63 -PVPPFGDDDPWLAIVGLAPGMKGANRTGRPFTGDFAGILLYETLLKYGLATGHYQADIN 121 Query: 151 --------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202 + PP N+ + + + K++L +G+ Sbjct: 122 DGLKLKGTVVLNSVRCLPPQNKPTTQEMVTCRPFFLGAMAHYPHLKVILALGHIAHQTIL 181 Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 K I + + H ++ T + + Sbjct: 182 RAFGITLSSMPFKHGAAYQLSPEIQLVDSYHCS--RYNQNTRRLTEDMFQDVFAKIIE 237 >gi|254477592|ref|ZP_05090978.1| uracil-DNA glycosylase superfamily protein [Ruegeria sp. R11] gi|214031835|gb|EEB72670.1| uracil-DNA glycosylase superfamily protein [Ruegeria sp. R11] Length = 197 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 27/200 (13%), Positives = 60/200 (30%), Gaps = 25/200 (12%) Query: 78 HELKSLLRSFHDCHLCSTSLST-----ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 L+ +R+ C + +T ++I G P + SGKPF+ + Sbjct: 5 EGLEQDIRACRLCAERFAATATGHRPRPVTWFRSSARILIAGQAPGARVHESGKPFTDPS 64 Query: 133 GNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLS--NIEMEICRPIIMRQIEL-IS 186 G+ L L ++ R + I ++ P + + R + Sbjct: 65 GDRLRDWLGLSEAQFYDRDLVAIVPMAFCFPGYSAKKADLPPPAICRSTWHDRLMPELSR 124 Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHP-----QELIQYP 241 ++ + +G + + +W + HP L + P Sbjct: 125 LQLRILVGGYAHGYHLGGKTSVQARV-AQWRDHAPQD-----FPLPHPSWRNTAWLKRNP 178 Query: 242 LIKKNTWHALITLKKALKNL 261 + L L+ ++ + Sbjct: 179 WFEAEL---LPVLRARVQEV 195 >gi|21220472|ref|NP_626251.1| hypothetical protein SCO1990 [Streptomyces coelicolor A3(2)] gi|256788396|ref|ZP_05526827.1| hypothetical protein SlivT_28241 [Streptomyces lividans TK24] gi|289772288|ref|ZP_06531666.1| conserved hypothetical protein [Streptomyces lividans TK24] gi|5689883|emb|CAB52046.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)] gi|289702487|gb|EFD69916.1| conserved hypothetical protein [Streptomyces lividans TK24] Length = 237 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 52/161 (32%), Gaps = 36/161 (22%) Query: 77 LHELKSLLRSFHDCHL------------------CSTSLSTICATQTEGQDLMIIGYTPS 118 L L + C + + L+I+G P+ Sbjct: 6 LSVLDRRIEGCRACPRLVEWREEVARTKRAAFADWTYWGRPVPGFGPPDARLLIVGLAPA 65 Query: 119 DS-DNISGKPFSG-KTGNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGN 163 N +G+ F+G ++G++L + L + + ++ PP Sbjct: 66 AHGGNRTGRMFTGDRSGDVLYQALYDVGLASQPTAVRVDDGLELYGVRVTSPVHCAPP-A 124 Query: 164 RNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFF 202 + E + CR +++++ L+ P + ++ +G Sbjct: 125 NKPTPAERDTCRSWLVQELGLLRPTLRAVVVLGAFGWQAAL 165 >gi|269105003|ref|ZP_06157699.1| uracil-DNA glycosylase [Photobacterium damselae subsp. damselae CIP 102761] gi|268161643|gb|EEZ40140.1| uracil-DNA glycosylase [Photobacterium damselae subsp. damselae CIP 102761] Length = 195 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 65/202 (32%), Gaps = 32/202 (15%) Query: 81 KSLLRSFHDCHLCSTSLSTIC---ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 ++L+ C +C L ++ ++IIG P + + G+ F +G+ L Sbjct: 4 ENLVHRIRQCQICKGKLPYPPKPLIQASDKAKILIIGQAPGEKTHFKGRVFDDVSGDRLR 63 Query: 138 KMLQSIEIMRTQIHISMISP---WHP---------PGNRNLSNIEMEICRPIIMRQIELI 185 L I I P +P G++ PI++ Q+ Sbjct: 64 AWLGVDRETFYNPDIFNIVPMGFCYPGTIIRNGKRAGDKPPRPECRATWHPILLPQLT-- 121 Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQY 240 ++++ +GN ++ N I L HP L ++ Sbjct: 122 QVELVILMGNYAIEYYLKQKKLSVTDA---VFNQDHHKDNIFVLP--HPSPRNNIWLAKH 176 Query: 241 PLIKKNTWHALI-TLKKALKNL 261 P ++ LK+ + L Sbjct: 177 PQ----FEQDILPKLKQKVAQL 194 >gi|300023757|ref|YP_003756368.1| uracil-DNA glycosylase superfamily [Hyphomicrobium denitrificans ATCC 51888] gi|299525578|gb|ADJ24047.1| Uracil-DNA glycosylase superfamily [Hyphomicrobium denitrificans ATCC 51888] Length = 219 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 26/182 (14%), Positives = 46/182 (25%), Gaps = 33/182 (18%) Query: 82 SLLRSFHDCH-LCSTSL-----------STICATQTEGQDLMIIGYTPSDSD-NISGKPF 128 C L + + + L+I+G P + N +G+PF Sbjct: 13 EAPVKCGRCPRLVAYRRDNEAKEPSWFNGAVPSFGDPKARLLIVGLAPGRNGANRTGRPF 72 Query: 129 SGKT-GNMLDKMLQSIEIMRTQ-------------IHISMISPWHPPGNRNLSNIEMEIC 174 +G G++L L + R I+ PP N+ Sbjct: 73 TGDYAGDLLYATLLAYGFARGNYQARSDDGLKLVDCMITNAVRCVPPENKPEPKEIATCR 132 Query: 175 RPIIMRQIELISPKILLFIGNKTKNFF---FNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231 R L +I+L +G + G + + Sbjct: 133 PFFQSRLGHLPRMEIMLALGRIAHDQVLTTLGKRKALFPFAHGARHEIEPGRV---LFDS 189 Query: 232 VH 233 H Sbjct: 190 FH 191 >gi|301299401|ref|ZP_07205681.1| uracil-DNA glycosylase, family 4 [Lactobacillus salivarius ACS-116-V-Col5a] gi|300853007|gb|EFK80611.1| uracil-DNA glycosylase, family 4 [Lactobacillus salivarius ACS-116-V-Col5a] Length = 198 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 20/168 (11%), Positives = 49/168 (29%), Gaps = 18/168 (10%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 ++I+G P + ++ +G+ L L + I P Sbjct: 36 NPKAKILIVGQAPGQKAQDTHMVWNDLSGDRLRTWLDVSRDEFYNSDLFAIMPMDFYFPG 95 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + + + + ++ + +G+ + N + K +++ Sbjct: 96 KGKGGDLPPRKNFAAKWHPKLRKLMPNIELTILVGSYAVKKYLNLKSSA------KLTDI 149 Query: 220 CTPHSII--PTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKN 260 + VHP L + P ++ L L +KN Sbjct: 150 VKDYQTYLPEYFPLVHPSPRNLIWLKKNPWFEEQVVKDLQKLVSEIKN 197 >gi|163734115|ref|ZP_02141556.1| uracil-DNA glycosylase, putative [Roseobacter litoralis Och 149] gi|161392651|gb|EDQ16979.1| uracil-DNA glycosylase, putative [Roseobacter litoralis Och 149] Length = 199 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 63/197 (31%), Gaps = 23/197 (11%) Query: 80 LKSLLRSFHDCHLCSTSLSTIC-----ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L+ +R C + +T A ++I G P + SGKPFS +G Sbjct: 2 LQDQIRDCRLCAERFAATATAHEPRPVAWFEPQARVLIAGQAPGMRVHKSGKPFSDPSGE 61 Query: 135 MLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEICRPIIMRQIELISPK 188 L + + + R Q+ I ++ + +L + L Sbjct: 62 RLRSWMGVSEQVFYDRAQVAIVPMAFCFPGYSASGSDLPPPPICAQTWHDKVTAALPHIG 121 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247 + L +G+ + + T + I L HP + KKN Sbjct: 122 LTLIVGSYAMKYHLGLKSSLTQA----VHSWKDRDEDIFVLP--HPSW--RNTGWLKKNP 173 Query: 248 W--HALI-TLKKALKNL 261 W + L+ LK++ Sbjct: 174 WFEEEVQPRLRSRLKDV 190 >gi|217422510|ref|ZP_03454013.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei 576] gi|254185859|ref|ZP_04892377.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei Pasteur 52237] gi|157933545|gb|EDO89215.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei Pasteur 52237] gi|217394741|gb|EEC34760.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei 576] Length = 224 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 75/221 (33%), Gaps = 21/221 (9%) Query: 53 ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDL 110 ++ R+ SP+ S + L L +R+ C HL + A G + Sbjct: 1 MSPKRNAPSPVRNGTPSKPTRHARLDALLREIRACSVCAPHLPCGPRPVVRA--HPGARI 58 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLS 167 +I+G P + SG P+ +G L L + + I + +P + Sbjct: 59 LIVGQAPGARVHASGIPWDDASGKRLRAWLNVDDATFYDESLFAIVPMGFCYPGRGASGD 118 Query: 168 NIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHS 224 N C P+ + ++ P ++ L IG + F + T + + W Sbjct: 119 NPPRPECAPLWLDKLLAELPDIRLTLLIGQYAQRRFLGARRKSTLTETVRAWPEYAPEF- 177 Query: 225 IIPTLATVHPQELIQYPLI-KKNTWHA---LITLKKALKNL 261 + HP + K++ W L L+ + L Sbjct: 178 ----IPLPHPSP--RNQGWLKQHPWFDADVLPALRDRVAEL 212 >gi|90581307|ref|ZP_01237104.1| hypothetical protein VAS14_19126 [Vibrio angustum S14] gi|90437546|gb|EAS62740.1| hypothetical protein VAS14_19126 [Vibrio angustum S14] Length = 195 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 63/183 (34%), Gaps = 21/183 (11%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTIC---ATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 + L+ L+ C + + L++IG P + +G PF+ Sbjct: 2 KQVDNLRDLIHLCEICK-----DHLVPRPVIQFSSKARLLLIGQAPGLKVHQTGIPFNDP 56 Query: 132 TGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188 +G+ L + L + I I + +P + C P + + + P Sbjct: 57 SGDRLRQWLGLDKDTFYNPEHIAIMPMGLCYPGKGKTGDLPPRSECAPQWHQPVLDLMPN 116 Query: 189 --ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KK 245 + L IG +N++ + + + + +W + + HP + + KK Sbjct: 117 IGMTLLIGQYAQNYYLQDKPKTLTETVKQWQQWAPRY-----IPLPHPSP--RNAIWLKK 169 Query: 246 NTW 248 N W Sbjct: 170 NPW 172 >gi|17987380|ref|NP_540014.1| Uracil-DNA glycosylase [Brucella melitensis bv. 1 str. 16M] gi|23501755|ref|NP_697882.1| hypothetical protein BR0869 [Brucella suis 1330] gi|161618829|ref|YP_001592716.1| hypothetical protein BCAN_A0883 [Brucella canis ATCC 23365] gi|163843140|ref|YP_001627544.1| hypothetical protein BSUIS_A0907 [Brucella suis ATCC 23445] gi|225852381|ref|YP_002732614.1| hypothetical protein BMEA_A0907 [Brucella melitensis ATCC 23457] gi|254689120|ref|ZP_05152374.1| hypothetical protein Babob68_02830 [Brucella abortus bv. 6 str. 870] gi|254693603|ref|ZP_05155431.1| hypothetical protein Babob3T_02844 [Brucella abortus bv. 3 str. Tulya] gi|254701634|ref|ZP_05163462.1| hypothetical protein Bsuib55_12361 [Brucella suis bv. 5 str. 513] gi|254706920|ref|ZP_05168748.1| hypothetical protein BpinM_08026 [Brucella pinnipedialis M163/99/10] gi|254709972|ref|ZP_05171783.1| hypothetical protein BpinB_06797 [Brucella pinnipedialis B2/94] gi|254713972|ref|ZP_05175783.1| hypothetical protein BcetM6_11571 [Brucella ceti M644/93/1] gi|256031465|ref|ZP_05445079.1| hypothetical protein BpinM2_12564 [Brucella pinnipedialis M292/94/1] gi|256044543|ref|ZP_05447447.1| hypothetical protein Bmelb1R_08603 [Brucella melitensis bv. 1 str. Rev.1] gi|256060970|ref|ZP_05451128.1| hypothetical protein Bneo5_11496 [Brucella neotomae 5K33] gi|256113408|ref|ZP_05454257.1| hypothetical protein Bmelb3E_11782 [Brucella melitensis bv. 3 str. Ether] gi|256159591|ref|ZP_05457353.1| hypothetical protein BcetM4_11543 [Brucella ceti M490/95/1] gi|256254871|ref|ZP_05460407.1| hypothetical protein BcetB_11360 [Brucella ceti B1/94] gi|256257369|ref|ZP_05462905.1| hypothetical protein Babob9C_08414 [Brucella abortus bv. 9 str. C68] gi|256264120|ref|ZP_05466652.1| conserved hypothetical protein [Brucella melitensis bv. 2 str. 63/9] gi|256369297|ref|YP_003106805.1| hypothetical protein BMI_I866 [Brucella microti CCM 4915] gi|260563896|ref|ZP_05834382.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M] gi|260566573|ref|ZP_05837043.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40] gi|260754618|ref|ZP_05866966.1| uracil-DNA glycosylase [Brucella abortus bv. 6 str. 870] gi|260883645|ref|ZP_05895259.1| uracil-DNA glycosylase [Brucella abortus bv. 9 str. C68] gi|261213868|ref|ZP_05928149.1| uracil-DNA glycosylase [Brucella abortus bv. 3 str. Tulya] gi|261222054|ref|ZP_05936335.1| uracil-DNA glycosylase [Brucella ceti B1/94] gi|261314385|ref|ZP_05953582.1| uracil-DNA glycosylase [Brucella pinnipedialis M163/99/10] gi|261317519|ref|ZP_05956716.1| uracil-DNA glycosylase [Brucella pinnipedialis B2/94] gi|261321726|ref|ZP_05960923.1| uracil-DNA glycosylase [Brucella ceti M644/93/1] gi|261324972|ref|ZP_05964169.1| uracil-DNA glycosylase [Brucella neotomae 5K33] gi|261752186|ref|ZP_05995895.1| uracil-DNA glycosylase [Brucella suis bv. 5 str. 513] gi|265988554|ref|ZP_06101111.1| uracil-DNA glycosylase [Brucella pinnipedialis M292/94/1] gi|265990968|ref|ZP_06103525.1| uracil-DNA glycosylase [Brucella melitensis bv. 1 str. Rev.1] gi|265994805|ref|ZP_06107362.1| uracil-DNA glycosylase [Brucella melitensis bv. 3 str. Ether] gi|265998019|ref|ZP_06110576.1| uracil-DNA glycosylase [Brucella ceti M490/95/1] gi|294852222|ref|ZP_06792895.1| hypothetical protein BAZG_01141 [Brucella sp. NVSL 07-0026] gi|297248218|ref|ZP_06931936.1| hypothetical protein BAYG_01156 [Brucella abortus bv. 5 str. B3196] gi|306840362|ref|ZP_07473130.1| Uracil-DNA glycosylase [Brucella sp. BO2] gi|17983067|gb|AAL52278.1| hypothetical protein BMEI1097 [Brucella melitensis bv. 1 str. 16M] gi|23347683|gb|AAN29797.1| conserved hypothetical protein [Brucella suis 1330] gi|161335640|gb|ABX61945.1| hypothetical protein BCAN_A0883 [Brucella canis ATCC 23365] gi|163673863|gb|ABY37974.1| hypothetical protein BSUIS_A0907 [Brucella suis ATCC 23445] gi|225640746|gb|ACO00660.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457] gi|255999457|gb|ACU47856.1| hypothetical protein BMI_I866 [Brucella microti CCM 4915] gi|260153912|gb|EEW89004.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M] gi|260156091|gb|EEW91171.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40] gi|260674726|gb|EEX61547.1| uracil-DNA glycosylase [Brucella abortus bv. 6 str. 870] gi|260873173|gb|EEX80242.1| uracil-DNA glycosylase [Brucella abortus bv. 9 str. C68] gi|260915475|gb|EEX82336.1| uracil-DNA glycosylase [Brucella abortus bv. 3 str. Tulya] gi|260920638|gb|EEX87291.1| uracil-DNA glycosylase [Brucella ceti B1/94] gi|261294416|gb|EEX97912.1| uracil-DNA glycosylase [Brucella ceti M644/93/1] gi|261296742|gb|EEY00239.1| uracil-DNA glycosylase [Brucella pinnipedialis B2/94] gi|261300952|gb|EEY04449.1| uracil-DNA glycosylase [Brucella neotomae 5K33] gi|261303411|gb|EEY06908.1| uracil-DNA glycosylase [Brucella pinnipedialis M163/99/10] gi|261741939|gb|EEY29865.1| uracil-DNA glycosylase [Brucella suis bv. 5 str. 513] gi|262552487|gb|EEZ08477.1| uracil-DNA glycosylase [Brucella ceti M490/95/1] gi|262765918|gb|EEZ11707.1| uracil-DNA glycosylase [Brucella melitensis bv. 3 str. Ether] gi|263001752|gb|EEZ14327.1| uracil-DNA glycosylase [Brucella melitensis bv. 1 str. Rev.1] gi|263094339|gb|EEZ18184.1| conserved hypothetical protein [Brucella melitensis bv. 2 str. 63/9] gi|264660751|gb|EEZ31012.1| uracil-DNA glycosylase [Brucella pinnipedialis M292/94/1] gi|294820811|gb|EFG37810.1| hypothetical protein BAZG_01141 [Brucella sp. NVSL 07-0026] gi|297175387|gb|EFH34734.1| hypothetical protein BAYG_01156 [Brucella abortus bv. 5 str. B3196] gi|306289668|gb|EFM60866.1| Uracil-DNA glycosylase [Brucella sp. BO2] gi|326408888|gb|ADZ65953.1| conserved hypothetical protein [Brucella melitensis M28] gi|326538605|gb|ADZ86820.1| conserved hypothetical protein [Brucella melitensis M5-90] Length = 213 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 26/195 (13%), Positives = 60/195 (30%), Gaps = 20/195 (10%) Query: 77 LHELKSLLRSFHDC---HL----CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129 L EL+ +++ C L + +C + I G P + + PF+ Sbjct: 7 LDELRHSIQACRLCRDTPLFPPPLPHEPNPVCIISDT-ARIAICGQAPGIRVHNTSLPFN 65 Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEICRPIIMRQIE 183 +G+ L + L + ++ I + + +L Sbjct: 66 DPSGDRLRQWLGVTREEFYDASRFAIVPMGFCFPGYDKNGGDLPPRRECRQTWHDRVFAA 125 Query: 184 LISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNL--CTPHSIIPTLATVHPQELIQY 240 + + +L +G + + + + + W + H+ L HP + Sbjct: 126 MPQLEFILVVGQYALAYHLPDYRGRNLTETVKNWRHFMETPSHTGRIALPLPHPSW--RN 183 Query: 241 PLI-KKNTWHALITL 254 K+N W + + Sbjct: 184 SGWLKRNPWFDMEVV 198 >gi|294787972|ref|ZP_06753216.1| putative uracil-DNA glycosylase, family 4 [Simonsiella muelleri ATCC 29453] gi|294484265|gb|EFG31948.1| putative uracil-DNA glycosylase, family 4 [Simonsiella muelleri ATCC 29453] Length = 241 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 37/257 (14%), Positives = 80/257 (31%), Gaps = 36/257 (14%) Query: 1 MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60 M R + + L + + + N E + + I Sbjct: 1 MLDSRYIHLHEALGLGAMWLKQSAKIIGQLENRELLSARVPHSPPMVKRKEQSKTISASR 60 Query: 61 SPLVQQADSIAQKACSLHE-----LKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115 ++Q+ +S + +L E L + +L S +M + Sbjct: 61 LAVLQKINSATLQPETLPENNAPILPKYSTDSVENYLKILS--------VPKARVMALSV 112 Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICR 175 S +D ++G+ SG G + KML +I++ + + +S P + ++ Sbjct: 113 CASPADVVAGQLLSGSDGELFTKMLAAIQLNQKDVWLSSWLKDLPDFSPKPPTEAVQAAA 172 Query: 176 PIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATV--- 232 P + + +L +G + + +P T Sbjct: 173 PRVQAEWQLC-----------GAKALL---------LMGNFFERDDVKAQLPVAPTFYIP 212 Query: 233 HPQELIQYPLIKKNTWH 249 HPQ ++ P +K++ W Sbjct: 213 HPQRILNDPTLKRSAWE 229 >gi|212223829|ref|YP_002307065.1| Uracil-DNA glycosylase [Thermococcus onnurineus NA1] gi|212008786|gb|ACJ16168.1| Uracil-DNA glycosylase [Thermococcus onnurineus NA1] Length = 248 Score = 60.9 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 54/154 (35%), Gaps = 36/154 (23%) Query: 101 CATQTEGQDLMIIGYTPSDSDNISG--KPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158 A G ++++G P + +G +L K L S+ I ++I+ + Sbjct: 104 FANGWVGSGIVLVGEAPGRKGCGLTGICFYRDTSGMLLRKTLFSLGINPDFVYITNVVKC 163 Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF--FNNDAQKTYQNLGKW 216 +PPGN+ E E+ + R++E++ PK + IG + D Sbjct: 164 NPPGNKLKGFDERELSL--LQRELEILKPKAIFAIGRTAEKALKRLGFD----------- 210 Query: 217 SNLCTPHSIIPTLATV--HPQEL----IQYPLIK 244 AT HP ++ P + Sbjct: 211 -------------ATYLRHPAWYVRRGLREPNEE 231 >gi|242399554|ref|YP_002994979.1| Uracil-DNA glycosylase [Thermococcus sibiricus MM 739] gi|242265948|gb|ACS90630.1| Uracil-DNA glycosylase [Thermococcus sibiricus MM 739] Length = 270 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 49/141 (34%), Gaps = 24/141 (17%) Query: 101 CATQTEGQDLMIIGYTPSDSDNISG--KPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158 A G ++++G P + +G +L KML S+ + ++I+ + Sbjct: 104 FANGWVGSRIVLVGEAPGRKGCGLTGICFYRDASGMLLRKMLFSLGVNPDFVYITNVVKC 163 Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218 +PP N+ + E+ + ++++++ PK + IG + Sbjct: 164 NPPENKFKGFSKKELSL--LEKELKIVQPKGIFAIGRTAYKA-LKKLGVDSTYLR----- 215 Query: 219 LCTPHSIIPTLATVHPQELIQ 239 HP ++ Sbjct: 216 --------------HPAWYLR 222 >gi|144899868|emb|CAM76732.1| Uracil-DNA glycosylase superfamily [Magnetospirillum gryphiswaldense MSR-1] Length = 213 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 49/181 (27%), Gaps = 35/181 (19%) Query: 84 LRSFHDCHL---CSTSLSTIC---------ATQTEGQDLMIIGYTPSDSD-NISGKPFSG 130 C + + + ++ IG P N +G+PF+G Sbjct: 8 AADCRLCPRLVEYRRANQAAFPDWHNAPVDSFGSLDARILFIGLAPGVRGANRTGRPFTG 67 Query: 131 KT-GNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSNIEMEICRP 176 G++L L + R + I PP N E + C P Sbjct: 68 DYAGDLLYSSLLKYGLARGEYRADPDDGFELVGARICNAVRCVPPEN-KPLPSEFKACLP 126 Query: 177 IIMRQI-ELISPKILLFIGNKTKNFF---FNNDAQKTYQNLGKWSNLCTPHSIIPTLATV 232 + +++ + S + L IG G L + + + Sbjct: 127 FLSQELAAMPSLRALFAIGRNAHEVALTTLGLKKSAYPFAHGAMHEL---GKGLILVDSY 183 Query: 233 H 233 H Sbjct: 184 H 184 >gi|6136303|gb|AAF04324.1| unknown [Bradyrhizobium japonicum] Length = 283 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 32/236 (13%), Positives = 63/236 (26%), Gaps = 40/236 (16%) Query: 29 DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFH 88 + P ++ +S+ R + L +A ++ +L Sbjct: 29 NAPRRAIVASARPATTPRNSSSARPRWPRGAMTTLRSEAARSGRQPPTL-------VPDR 81 Query: 89 DCHLC---------STSLSTICA------TQTEGQDLMIIGYTPSDSD-NISGKPFSGKT 132 DC LC + + L+I+G P N +G+PF+G Sbjct: 82 DCPLCPRLVAFREGESRARAVVGITPRSPFGDVKARLLIVGLAPGMQGANRTGRPFTGDY 141 Query: 133 -GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPII 178 G++L L I+ PP N+ L + + Sbjct: 142 AGDLLYATLLEYGFAKGAYQARPDDGLKLVDCRIANAVHCVPPQNKPLPAEINTCRQFLA 201 Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQ-NLGKWSNLCTPHSIIPTLATVH 233 + + + ++ +G + K Q G + H Sbjct: 202 ANLATMPNLRAIVALGRIAHDTVLKPLNLKGSQAPFG--HGAVHQAGAFRLYDSYH 255 >gi|323498793|ref|ZP_08103779.1| hypothetical protein VISI1226_14811 [Vibrio sinaloensis DSM 21326] gi|323316155|gb|EGA69180.1| hypothetical protein VISI1226_14811 [Vibrio sinaloensis DSM 21326] Length = 193 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 67/185 (36%), Gaps = 19/185 (10%) Query: 75 CSLHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 +L +L + + + C L I A E L+IIG P + S P++ + Sbjct: 2 NTLDQLLTQVTNCRVCQPYLKLGCNPVIQA--NEAAKLLIIGQAPGLKVHHSSIPWNDPS 59 Query: 133 GNMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP-- 187 G+ L + L QI I + +P ++ + C P+ I P Sbjct: 60 GDRLRQWLALDKEQFYDPKQIAIMPMGLCYPGKGKSGDLPPRKECAPLWHTPILEQLPNI 119 Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPL 242 ++ L IG ++++ + + + + W + +P HP L P Sbjct: 120 EMTLLIGQYAQSYYLQDKPKTLTETVKSWRRWAPHYLPLP-----HPSPRNTLWLRNNPW 174 Query: 243 IKKNT 247 +++ Sbjct: 175 FEEDV 179 >gi|302383922|ref|YP_003819745.1| uracil-DNA glycosylase superfamily [Brevundimonas subvibrioides ATCC 15264] gi|302194550|gb|ADL02122.1| Uracil-DNA glycosylase superfamily [Brevundimonas subvibrioides ATCC 15264] Length = 198 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 28/189 (14%), Positives = 58/189 (30%), Gaps = 21/189 (11%) Query: 73 KACSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130 + L + S +R+ C L T + L+I G P + SG PF+ Sbjct: 3 TSSDLDAVLSDIRACRACLGELPHTPRPVV--RVFPETRLLICGQAPGRRVHESGLPFTD 60 Query: 131 KTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNI-EMEICRPIIMRQIELIS 186 +G+ L + +I ++ + +P + C + ++ Sbjct: 61 PSGDRLRDWMGVDHETFYADHRIGVAAQAFCYPGTAPKGGDYPPPRRCAELWRPRLLQAL 120 Query: 187 PKI--LLFIGNKTKNFFFNND-AQKTYQNLGKWSNLCTPHSIIPTLATVHP-----QELI 238 P++ L +G + + + + W + L HP L Sbjct: 121 PRMELTLLVGGHAQVWALGDRAKSTMTDTVRAWRDY-----GPAVLPLPHPSWRNTAWLR 175 Query: 239 QYPLIKKNT 247 + P + Sbjct: 176 RNPWFEAEV 184 >gi|56461599|ref|YP_156880.1| Uracil-DNA glycosylase [Idiomarina loihiensis L2TR] gi|56180609|gb|AAV83331.1| Uracil-DNA glycosylase [Idiomarina loihiensis L2TR] Length = 196 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 71/201 (35%), Gaps = 20/201 (9%) Query: 72 QKACSLHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129 ++ ++ +R+ C L + + +++ G P + SGKPF Sbjct: 4 EEPPHWQQILRDVRACTLCEPELPLGARPVV--QLHPKARILVAGQAPGKRVHASGKPFD 61 Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186 +G+ L + + + ++ I + +P ++ C P QI Sbjct: 62 DPSGDRLRQWMGIDKDTFYNAEELAIIPMGFCYPGTGKSGDLPPRPECAPTWREQILQQL 121 Query: 187 P--KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI- 243 P +++L IG + + + + + W + L HP + + Sbjct: 122 PNLELILAIGQYAQQWHLQEPKRSLTERVRDWRSYWPQ-----LLPLPHPSP--RNNIWM 174 Query: 244 KKNTW---HALITLKKALKNL 261 K+N W + L++ +K L Sbjct: 175 KRNPWFETEVIPELRQRVKEL 195 >gi|325293288|ref|YP_004279152.1| Uracil-DNA glycosylase [Agrobacterium sp. H13-3] gi|325061141|gb|ADY64832.1| Uracil-DNA glycosylase [Agrobacterium sp. H13-3] Length = 214 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 27/186 (14%), Positives = 56/186 (30%), Gaps = 17/186 (9%) Query: 77 LHELKSLLRSFHDCH------LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130 L L+ + C + + ++I G P + +G PF+ Sbjct: 15 LDGLRGAIALCRICRDTPTYGRLPHEPRPVV-VMSTRARILIAGQAPGLRVHETGVPFND 73 Query: 131 KTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNL---SNIEMEICRPIIMRQIEL 184 +G+ L + L + + I + P + + + Sbjct: 74 ASGDRLRQWLNVDRETFYDPDRFAIVPMGFCFPGYDDKGSDLPPRRECAPQWREKVLAAM 133 Query: 185 ISPKILLFIGNKTKNFFFNNDAQK-TYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI 243 +++L IG + F +K + + W + +S L HP + Sbjct: 134 PQVELVLAIGQYAQAFHLGERRRKTMTETVYDWRSYFHSNSGPAILPLPHPSW--RNTGW 191 Query: 244 -KKNTW 248 +KN W Sbjct: 192 LRKNPW 197 >gi|126664640|ref|ZP_01735624.1| hypothetical protein MELB17_02340 [Marinobacter sp. ELB17] gi|126630966|gb|EBA01580.1| hypothetical protein MELB17_02340 [Marinobacter sp. ELB17] Length = 200 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 61/191 (31%), Gaps = 26/191 (13%) Query: 75 CSLHEL--KSLLRSFHDCHLCSTSLSTICA-----TQTEGQDLMIIGYTPSDSDNISGKP 127 SL L + LL C LC + + E ++++G P + +G P Sbjct: 3 DSLASLPFEQLLSRVRACTLC--AENLPYGPRPVIQMAESARILVVGQAPGRRVHETGLP 60 Query: 128 FSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRN---LSNIEMEICRPIIMRQ 181 F+ +G+ L + + + Q+ I + +P +N E + Q Sbjct: 61 FNDPSGDRLRQWMGIGREPFYDERQLAILPMGFCYPGSGKNGDLPPRPECAQAWRSALLQ 120 Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----E 236 + + L IG N+ N A N+ W + HP Sbjct: 121 RL-PNVAMTLVIGQYAHNWHLANPAGTVTANVQNWRAYWPAQ-----MPMPHPSPRNNLW 174 Query: 237 LIQYPLIKKNT 247 L + P + Sbjct: 175 LRRNPWFEAEV 185 >gi|306838796|ref|ZP_07471627.1| Uracil-DNA glycosylase [Brucella sp. NF 2653] gi|306844075|ref|ZP_07476669.1| Uracil-DNA glycosylase [Brucella sp. BO1] gi|306275518|gb|EFM57250.1| Uracil-DNA glycosylase [Brucella sp. BO1] gi|306406080|gb|EFM62328.1| Uracil-DNA glycosylase [Brucella sp. NF 2653] Length = 210 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 26/195 (13%), Positives = 60/195 (30%), Gaps = 20/195 (10%) Query: 77 LHELKSLLRSFHDC---HL----CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129 L EL+ +++ C L + +C + I G P + + PF+ Sbjct: 4 LDELRHSIQACRLCRDTPLFPPPLPHEPNPVCIISDT-ARIAICGQAPGIRVHNTSLPFN 62 Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEICRPIIMRQIE 183 +G+ L + L + ++ I + + +L Sbjct: 63 DPSGDRLRQWLGVTREEFYDASRFAIVPMGFCFPGYDKNGGDLPPRRECRQTWHDRVFAA 122 Query: 184 LISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNL--CTPHSIIPTLATVHPQELIQY 240 + + +L +G + + + + + W + H+ L HP + Sbjct: 123 MPQLEFILVVGQYALAYHLPDYRGRNLTETVRNWRHFMETPSHTGRIALPLPHPSW--RN 180 Query: 241 PLI-KKNTWHALITL 254 K+N W + + Sbjct: 181 SGWLKRNPWFDMEVV 195 >gi|30248935|ref|NP_841005.1| hypothetical protein NE0931 [Nitrosomonas europaea ATCC 19718] gi|30138552|emb|CAD84842.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718] Length = 217 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 30/222 (13%), Positives = 61/222 (27%), Gaps = 35/222 (15%) Query: 58 HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117 + SP + A L ++K+ +H + L+I+G P Sbjct: 2 TVSSPFQPDCRDCPRLAQHLDQVKTDYPDYHA--------RPVAPFGDSSAKLLIVGLAP 53 Query: 118 SDSD-NISGKPFSGKT-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPG 162 N +G+PF+G G +L + L T I+ PP Sbjct: 54 GLHGANRTGRPFTGDYAGILLYRTLHKFGFASHDESVSADDPLHLTDCRITNAVKCLPP- 112 Query: 163 NRNLSNIEMEICRPIIMRQIELIS---PKILLFIGNKTKNFF---FNNDAQKTYQNLGKW 216 E+ C + +++ + + LL +G + G Sbjct: 113 ANKPQPAEIRQCNAFLAVELDNFARNGGQALLALGTIAHQAVLMALGCRNADFPFSHGAI 172 Query: 217 SNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 + + + H ++ T + + Sbjct: 173 HRVTEELKLYD---SYHCS--RYNTQTRRLTETMFEQIFDRI 209 >gi|254718973|ref|ZP_05180784.1| hypothetical protein Bru83_05439 [Brucella sp. 83/13] gi|265983963|ref|ZP_06096698.1| uracil-DNA glycosylase [Brucella sp. 83/13] gi|264662555|gb|EEZ32816.1| uracil-DNA glycosylase [Brucella sp. 83/13] Length = 213 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 26/195 (13%), Positives = 60/195 (30%), Gaps = 20/195 (10%) Query: 77 LHELKSLLRSFHDC---HL----CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129 L EL+ +++ C L + +C + I G P + + PF+ Sbjct: 7 LDELRHSIQACRLCRDTPLFPPPLPHEPNPVCIISDT-ARIAICGQAPGIRVHNTSLPFN 65 Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEICRPIIMRQIE 183 +G+ L + L + ++ I + + +L Sbjct: 66 DPSGDRLRQWLGVTREEFYDASRFAIVPMGFCFPGYDKNGGDLPPRRECRQTWHDRVFAA 125 Query: 184 LISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNL--CTPHSIIPTLATVHPQELIQY 240 + + +L +G + + + + + W + H+ L HP + Sbjct: 126 MPQLEFILVVGQYALAYHLPDYRGRNLTETVRNWRHFMETPSHTGRIALPLPHPSW--RN 183 Query: 241 PLI-KKNTWHALITL 254 K+N W + + Sbjct: 184 SGWLKRNPWFDMEVV 198 >gi|73538349|ref|YP_298716.1| uracil-DNA glycosylase superfamily protein [Ralstonia eutropha JMP134] gi|72121686|gb|AAZ63872.1| Uracil-DNA glycosylase superfamily [Ralstonia eutropha JMP134] Length = 197 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 65/189 (34%), Gaps = 18/189 (9%) Query: 70 IAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129 A++ L L + + + C L + A L+I+G P + +G P++ Sbjct: 2 PAKRRSPLDILLNDITACRACDLPYGPRPVVRA--APTARLLIVGQAPGRRVHDTGIPWN 59 Query: 130 GKTGNMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186 +G+ L LQ ++I I + +P + C P+ Q+ Sbjct: 60 DPSGDQLRAWLQMTPDEFYDTSRIAIVPMGFCYPGKGASGDLPPRTECAPLWHAQLLATM 119 Query: 187 P--KILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELI 238 P ++ L IG + ++ + +++ +P HP L Sbjct: 120 PHIRLTLLIGRYAQGYYLQGRLKPTLTDTVAAYADYLPQFLPLP-----HPSPRNRLWLR 174 Query: 239 QYPLIKKNT 247 + P + + Sbjct: 175 RNPWFEADV 183 >gi|209964805|ref|YP_002297720.1| uracil-DNA glycosylase superfamily [Rhodospirillum centenum SW] gi|209958271|gb|ACI98907.1| uracil-DNA glycosylase superfamily [Rhodospirillum centenum SW] Length = 219 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 56/179 (31%), Gaps = 38/179 (21%) Query: 89 DCHLC---------------STSLSTICATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT 132 DC LC + + + + L+I+G P N +G+PF+G Sbjct: 15 DCPLCPRLAAFRQDNRARFPDHANAPVPSFGPASARLLIVGLAPGLHGANRTGRPFTGDY 74 Query: 133 -GNMLDKMLQSIEIMR-------------TQIHISMISPWHPPGNRNLSNIEMEICRPII 178 G++L + L R I + PP N + E+ CR + Sbjct: 75 AGDLLYETLALFGFARGRYDRRPDDGLELVDCRIVNSARCVPPEN-KPTPAEVATCRRFL 133 Query: 179 MRQIEL-ISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 + ++E + ++ +G A + G + + + H Sbjct: 134 IDELEHLPDLRAVVALGTVAHASTVTALGGRASRFPFAHGARHEVRP---GVALFDSYH 189 >gi|209542562|ref|YP_002274791.1| Uracil-DNA glycosylase superfamily [Gluconacetobacter diazotrophicus PAl 5] gi|209530239|gb|ACI50176.1| Uracil-DNA glycosylase superfamily [Gluconacetobacter diazotrophicus PAl 5] Length = 232 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 31/235 (13%), Positives = 56/235 (23%), Gaps = 25/235 (10%) Query: 44 KSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHE--LKSLLRSFHDCHLCSTSLSTIC 101 A+ SP L E L + + + Sbjct: 2 PPRSRALARPAAPSVSTSPGPDIPPRECPACPRLVEYRLANQAAH----PDWWNA--PVP 55 Query: 102 ATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEIM------------- 146 L+I+G P N +G+PF+G G +L + L Sbjct: 56 PWGESSASLLIVGLAPGVKGANRTGRPFTGDYAGTLLYETLIEYGFATGRYGADPADGLV 115 Query: 147 RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206 I PP N ++ + + + K +L +G N Sbjct: 116 LNDCRIVNAVRCVPPANLPQTSEVRTCNHFLRSELTSMPNLKAVLTLGVVAHNATVAACG 175 Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + + T + + + H T + L+ L Sbjct: 176 IPMSRIRFTHGQVQTLPNGLVLTDSYHVS--RYNTNTGVLTTDMFRAVVARLRAL 228 >gi|46203079|ref|ZP_00208786.1| COG1573: Uracil-DNA glycosylase [Magnetospirillum magnetotacticum MS-1] Length = 148 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 12/121 (9%) Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISP 187 ML + L+ I R + +++ + + E+ R + R+++ + P Sbjct: 1 MLSRALEEAGIDRREAYLTNAVKHFKFTLRGKRRIHEKPTAGEVSHYRWWLDRELDFVGP 60 Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247 ++++ +G + G TVHP L++ P T Sbjct: 61 RLVVALGATAVLALTG-KQIPITRARGP----AEFGKPFQGFITVHPSYLLRLPDEAART 115 Query: 248 W 248 W Sbjct: 116 W 116 >gi|86358051|ref|YP_469943.1| uracil-DNA glycosylase protein [Rhizobium etli CFN 42] gi|86282153|gb|ABC91216.1| probable uracil-DNA glycosylase protein [Rhizobium etli CFN 42] Length = 210 Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 70/204 (34%), Gaps = 23/204 (11%) Query: 78 HELKSLLRSFHDC---------HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128 L+ + + C H + A + ++I G P + SG PF Sbjct: 8 ETLRREIAACRICRDAPAGGPEHRLPHEPRPV-AVISARARILIAGQAPGLRVHESGLPF 66 Query: 129 SGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSN-IEMEICRPIIMRQIEL 184 +G+ L L ++ R++ I + P + ++ C P +++ Sbjct: 67 DDASGDRLRSWLGVDRASFYDRSRFAIVPMGFCFPGYDDKGADLPPRRECAPFWRQRVIA 126 Query: 185 ISPKI--LLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241 P+I +L IG + + + + + W L HP + Sbjct: 127 AMPQIELVLVIGQYAQAWHMADEKRGNMTETVRAWRASLLSGRSPAVLPLPHPSW--RNS 184 Query: 242 LI-KKNTW--HALI-TLKKALKNL 261 K+N+W L+ L++ +K L Sbjct: 185 GWLKRNSWFEEELLPVLQERVKML 208 >gi|148559096|ref|YP_001258844.1| hypothetical protein BOV_0861 [Brucella ovis ATCC 25840] gi|148370353|gb|ABQ60332.1| conserved hypothetical protein [Brucella ovis ATCC 25840] Length = 213 Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 26/195 (13%), Positives = 60/195 (30%), Gaps = 20/195 (10%) Query: 77 LHELKSLLRSFHDC---HL----CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129 L EL+ +++ C L + +C + I G P + + PF+ Sbjct: 7 LDELRHSIQACRLCRDTPLFPPPLPHEPNPVCIISDT-ARIAICGQAPGIRVHNTSLPFN 65 Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEICRPIIMRQIE 183 +G+ L + L + ++ I + + +L Sbjct: 66 DPSGDRLRQWLGVTREEFYDASRFAIVPMGFCFPGYDKNGGDLPPRRECRQTWHDRVFAA 125 Query: 184 LISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNL--CTPHSIIPTLATVHPQELIQY 240 + + +L +G + + + + + W + H+ L HP + Sbjct: 126 MPQLEFILVVGQYALAYHLPDYRGRNLMETVKNWRHFMETPSHTGRIALPLPHPSW--RN 183 Query: 241 PLI-KKNTWHALITL 254 K+N W + + Sbjct: 184 SGWLKRNPWFDMEVV 198 >gi|107026210|ref|YP_623721.1| uracil-DNA glycosylase superfamily protein [Burkholderia cenocepacia AU 1054] gi|116692606|ref|YP_838139.1| uracil-DNA glycosylase superfamily protein [Burkholderia cenocepacia HI2424] gi|254248301|ref|ZP_04941621.1| Uracil-DNA glycosylase [Burkholderia cenocepacia PC184] gi|105895584|gb|ABF78748.1| Uracil-DNA glycosylase superfamily [Burkholderia cenocepacia AU 1054] gi|116650606|gb|ABK11246.1| Uracil-DNA glycosylase superfamily [Burkholderia cenocepacia HI2424] gi|124874802|gb|EAY64792.1| Uracil-DNA glycosylase [Burkholderia cenocepacia PC184] Length = 199 Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 64/197 (32%), Gaps = 21/197 (10%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + +R+ C L + A ++I+G P + SG P+ +G Sbjct: 9 LDVLLTEIRACRACEADLPLGPRPVVRA--HRDARILIVGQAPGARVHASGIPWDDASGK 66 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189 L L T+ I + +P + N C P+ M ++ P ++ Sbjct: 67 RLRGWLGVDADTFYDETRFAIVPMGFCYPGRGASGDNPPRPECAPLWMDRLLAELPSVRL 126 Query: 190 LLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247 L IG + F + W + L HP + K + Sbjct: 127 TLLIGQYAQRHFLRGARKATLTDTVQAWRDY-----GPAILPLPHPSP--RNQAWFKHHP 179 Query: 248 WHA---LITLKKALKNL 261 W + L++ + +L Sbjct: 180 WFDAEVVPELRRRIASL 196 >gi|16125796|ref|NP_420360.1| hypothetical protein CC_1549 [Caulobacter crescentus CB15] gi|221234555|ref|YP_002516991.1| uracil-DNA glycosylase [Caulobacter crescentus NA1000] gi|13422934|gb|AAK23528.1| conserved hypothetical protein [Caulobacter crescentus CB15] gi|220963727|gb|ACL95083.1| uracil-DNA glycosylase [Caulobacter crescentus NA1000] Length = 225 Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 30/207 (14%), Positives = 60/207 (28%), Gaps = 37/207 (17%) Query: 88 HDCHLCST-----SLS----------TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131 DC LC + + + L+++G P N +G+PF+G Sbjct: 20 RDCPLCPRLVAYRRENQDFYPDWFNGPAPSFGDKNARLLVVGLAPGRKGANRTGRPFTGD 79 Query: 132 T-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177 G +L + L ++ PPGN+ ++ E + Sbjct: 80 YAGALLYETLIKFGFATGQFEARPDDSLQLIDAAVTNAVRCAPPGNKPETSEENACRPFL 139 Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237 R + K+++ +G+ ++ K + + H L Sbjct: 140 KARLDMFPNLKVIVTLGDVSRRNVLKTLGLKASAGV-PGHGSEFQAGPYRIFNSYHCSRL 198 Query: 238 IQYPLIKKNT---WHAL-ITLKKALKN 260 + T + L +K L Sbjct: 199 --NTNTGRLTTPMFEDLFARVKAYLDE 223 >gi|237740268|ref|ZP_04570749.1| DNA polymerase [Fusobacterium sp. 2_1_31] gi|229422285|gb|EEO37332.1| DNA polymerase [Fusobacterium sp. 2_1_31] Length = 195 Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 67/190 (35%), Gaps = 12/190 (6%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 ELK L S L D++ IG P + K + +G L Sbjct: 8 WEELKFELGSVGIETLPKDKQEIYIGMGNRNADVLFIGNDPKLYLSEDYKVEAQSSGEFL 67 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++ I+ +I+ ++ +N E +I ++ QI LISPKI++F+G + Sbjct: 68 IRLFDLAGIVPEAYYITTLTK-REVKIKNFDEEEKKILLDLLNMQIALISPKIIVFLGKE 126 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIKKNT-----WH 249 N + GK+ I T + +I + KK W Sbjct: 127 VAQMI-ENREVNLEKERGKFKKWKGD---IDCYLTYDVETVIKARNESGKKAAVATNFWL 182 Query: 250 ALITLKKALK 259 + +K+ L Sbjct: 183 DIKNIKERLD 192 >gi|114569513|ref|YP_756193.1| uracil-DNA glycosylase [Maricaulis maris MCS10] gi|114339975|gb|ABI65255.1| uracil-DNA glycosylase [Maricaulis maris MCS10] Length = 196 Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 39/200 (19%), Positives = 70/200 (35%), Gaps = 18/200 (9%) Query: 73 KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 A L L + +R+ C ++++G P + SGKPF+ + Sbjct: 2 AAPDLDTLLADIRACRVCAGEMPHEPRPVIQAHRDARILLVGQAPGTRVHASGKPFTDPS 61 Query: 133 GNMLDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIELI 185 G+ L L ++ T++ I + P G E +R+ L Sbjct: 62 GDRLRDWLQIDEASFYDPTKLAIVPMGFCFPGLDAKGGDLPPRRECAPLWQARVRE-NLP 120 Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-K 244 + ++ L +G F+ + A KT + + P L HP + + Sbjct: 121 NVRLTLLVGQYATRFWLGSRAHKTLTETVRQAERYAPD----FLPLPHPSW--RNSAWLR 174 Query: 245 KNTWHA---LITLKKALKNL 261 KN W L L+ +K+L Sbjct: 175 KNPWFGEIILPMLRCRMKDL 194 >gi|83949985|ref|ZP_00958718.1| uracil-DNA glycosylase, putative [Roseovarius nubinhibens ISM] gi|83837884|gb|EAP77180.1| uracil-DNA glycosylase, putative [Roseovarius nubinhibens ISM] Length = 201 Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 57/183 (31%), Gaps = 24/183 (13%) Query: 80 LKSLLRSFHDCHLCSTSLST-----ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L + +R+ C + +T A G ++I G P + SG PF ++G+ Sbjct: 4 LVTDIRACRICADRFAATATGHRPRPVAWFRPGARIVIAGQAPGARVHDSGLPFDDRSGD 63 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRN-----LSNIEMEICRPIIMRQIELIS 186 L L ++ R +I I ++ P + I + + ++ Sbjct: 64 RLRDWLGLDRATFYDRDRIAIIPMAFCFPGYDAKGSDLPPPPICAATWHDRVFAHLGDVA 123 Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KK 245 + +G + + T G W HP + K+ Sbjct: 124 L--TVLVGGYAQRHHLGVRSNVTDTVAG-WRAHAPE-----VFPLPHPSW--RNTAWLKR 173 Query: 246 NTW 248 N W Sbjct: 174 NPW 176 >gi|309774684|ref|ZP_07669708.1| phage SPO1 DNA polymerase-related protein [Erysipelotrichaceae bacterium 3_1_53] gi|308917584|gb|EFP63300.1| phage SPO1 DNA polymerase-related protein [Erysipelotrichaceae bacterium 3_1_53] Length = 207 Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 30/172 (17%), Positives = 55/172 (31%), Gaps = 13/172 (7%) Query: 72 QKACSLHELKSLLRSFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130 QK + +LK + + C + + +M I PS + SG PF Sbjct: 3 QKQDAFEQLKMEICACRLCADTFDHEPRPVF-RGKQKARIMQISQAPSIHVHNSGLPFDD 61 Query: 131 KTGNMLDKMLQ----SIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC-RPIIMRQIELI 185 +G L + + +I+ + +P IC R + R++E + Sbjct: 62 ASGKKLRREWYQIEDAQFYDEYSFYITSMGHCYPGKGAQGDKKPPRICARTWLKRELEAV 121 Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237 ++ + IG F N + + + L HP L Sbjct: 122 DNELYIIIGAMAARELFPNCSFEELVFR----DQRLYGKTALILP--HPSPL 167 >gi|225627358|ref|ZP_03785395.1| DNA glycosylase [Brucella ceti str. Cudo] gi|260168599|ref|ZP_05755410.1| hypothetical protein BruF5_09559 [Brucella sp. F5/99] gi|261758072|ref|ZP_06001781.1| conserved hypothetical protein [Brucella sp. F5/99] gi|225617363|gb|EEH14408.1| DNA glycosylase [Brucella ceti str. Cudo] gi|261738056|gb|EEY26052.1| conserved hypothetical protein [Brucella sp. F5/99] Length = 213 Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 25/195 (12%), Positives = 59/195 (30%), Gaps = 20/195 (10%) Query: 77 LHELKSLLRSFHDC---HL----CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129 L EL+ +++ C L + +C + I G P + + PF+ Sbjct: 7 LDELRHSIQACRLCRDTPLFPPPLPHEPNPVCIISDT-ARIAICGQAPGIRVHNTSLPFN 65 Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEICRPIIMRQIE 183 +G+ L + + ++ I + + +L Sbjct: 66 DPSGDRLRQWFGVTREEFYDASRFAIVPMGFCFPGYDKNGGDLPPRRECRQTWHDRVFAA 125 Query: 184 LISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNL--CTPHSIIPTLATVHPQELIQY 240 + + +L +G + + + + + W + H+ L HP + Sbjct: 126 MPQLEFILVVGQYALAYHLPDYRGRNLTETVKNWRHFMETPSHTGRIALPLPHPSW--RN 183 Query: 241 PLI-KKNTWHALITL 254 K+N W + + Sbjct: 184 SGWLKRNPWFDMEVV 198 >gi|256823774|ref|YP_003147737.1| Uracil-DNA glycosylase superfamily [Kangiella koreensis DSM 16069] gi|256797313|gb|ACV27969.1| Uracil-DNA glycosylase superfamily [Kangiella koreensis DSM 16069] Length = 199 Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 67/192 (34%), Gaps = 14/192 (7%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 +L +R+ C + I + +++ G P + GKPF +G+ L Sbjct: 5 QQLLKEIRACTICQDLPLGPNPIL-QFSSKAKILVAGQAPGQITHHKGKPFDDASGDRLR 63 Query: 138 KML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLF 192 L + ++ + + +P ++ IC ++I P ++ L Sbjct: 64 DWLGIDRDTFYDPEKLAVVPMGFCYPGKGKSGDLAPKAICAETWRKKILRELPDIELTLV 123 Query: 193 IGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKN 246 IG ++ N ++ + + W + + P + HP L + P ++ Sbjct: 124 IGKYAMDWHLPNRQERNLTETVKNWRHYIEQDT--PVMPLPHPSPRNNIWLKKNPWFEEQ 181 Query: 247 TWHALITLKKAL 258 L L AL Sbjct: 182 LIPELKNLVTAL 193 >gi|157962523|ref|YP_001502557.1| hypothetical protein Spea_2702 [Shewanella pealeana ATCC 700345] gi|157847523|gb|ABV88022.1| conserved hypothetical protein [Shewanella pealeana ATCC 700345] Length = 200 Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 26/190 (13%), Positives = 57/190 (30%), Gaps = 31/190 (16%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTI-CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 L +L++ + C L + + ++I G P + G+PF +G Sbjct: 7 LVQLQAEIAQCQICSEFLPLGAKPIVQLGAG---AKILIAGQAPGQKTHHKGRPFDDASG 63 Query: 134 NMLDKML---QSIEIMRTQIHISMISPWHP---------PGNRNLSNIEMEICRPIIMRQ 181 L L + I + +P G++ + R +++Q Sbjct: 64 ERLRAWLGVSREQFYDPELFAILPMGFCYPGSYSASDKQSGDKPPRPECAKQWRKQVLKQ 123 Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----E 236 + + ++ L +G + T +N + HP Sbjct: 124 LP--NVELTLLVGKYAIEWHLKQKISVTDS----VANWQAMWPQTLVMP--HPSPRNNIW 175 Query: 237 LIQYPLIKKN 246 L + P ++ Sbjct: 176 LKRNPEFEQK 185 >gi|172063426|ref|YP_001811077.1| uracil-DNA glycosylase superfamily protein [Burkholderia ambifaria MC40-6] gi|171995943|gb|ACB66861.1| Uracil-DNA glycosylase superfamily [Burkholderia ambifaria MC40-6] Length = 199 Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 56/185 (30%), Gaps = 22/185 (11%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + +R+ C L + A ++I+G P + SG P+ +G Sbjct: 9 LDVLLTEIRACRACEAELPLGPRPVVRA--HRDARVLIVGQAPGARVHASGIPWDDASGK 66 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIELISP 187 L L T+ I + +P G+ + ++ ++ I Sbjct: 67 RLRDWLGVDADTFYDETRFAIVPMGFCYPGRGASGDNPPRPECAPLWIDRLLAELPSI-- 124 Query: 188 KILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KK 245 ++ L IG + F + W + L HP + K Sbjct: 125 RLTLLIGQYAQRHFLRGTRKATLTDTVHAWRDY-----GPDVLPLPHPSP--RNQAWFKH 177 Query: 246 NTWHA 250 + W Sbjct: 178 HPWFD 182 >gi|258620633|ref|ZP_05715670.1| conserved hypothetical protein [Vibrio mimicus VM573] gi|258587148|gb|EEW11860.1| conserved hypothetical protein [Vibrio mimicus VM573] Length = 190 Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 68/180 (37%), Gaps = 17/180 (9%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + +R C L + + + ++IIG P + + P++ +G+ Sbjct: 2 LESLLAEIRQCKVCEPHLPLGA-NPVI-RAHPAAKILIIGQAPGTKVHNTSIPWNDASGD 59 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189 L + L + + +I I + +P R+ + C P+ ++ P ++ Sbjct: 60 RLRQWLDLDRDTFYCKEKIAIMPMGLCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQL 119 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248 L IG +N++ ++ + + +W L HP + L KK+ W Sbjct: 120 TLLIGQYAQNYYLSDKPATLTETVQQWQRWIPS-----VLPLPHPSP--RNTLWLKKHPW 172 >gi|289581417|ref|YP_003479883.1| uracil-DNA glycosylase [Natrialba magadii ATCC 43099] gi|289530970|gb|ADD05321.1| Uracil-DNA glycosylase superfamily [Natrialba magadii ATCC 43099] Length = 243 Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 56/188 (29%), Gaps = 38/188 (20%) Query: 86 SFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPS----DSDNISGKPFSGK------TGN 134 C L T D+++ G P D+DN G ++GK +G Sbjct: 18 DCQRCPALVEHRTCISWGTGPLDADVLVAGEAPGSGNPDADNWQGGNWTGKAYTSRHSGR 77 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHP-------------------------PGNRNLSNI 169 + +M++ I + + P P NR + Sbjct: 78 RIRRMVERIGYG-DDAYYTNAVKCFPANEESRSSTESGEPASTETPRTEDLPDNREPTPT 136 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN-LCTPHSIIPT 228 E CR ++ ++E + P +LL G + ++ + + Sbjct: 137 ERANCRTHLVTEVETLEPAVLLATGKHATKSVLAAEERELGGFIETVLEPVRCEQLETWL 196 Query: 229 LATVHPQE 236 + +HP Sbjct: 197 VPILHPSY 204 >gi|187919401|ref|YP_001888432.1| uracil-DNA glycosylase superfamily [Burkholderia phytofirmans PsJN] gi|187717839|gb|ACD19062.1| Uracil-DNA glycosylase superfamily [Burkholderia phytofirmans PsJN] Length = 203 Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 58/190 (30%), Gaps = 20/190 (10%) Query: 69 SIAQKACSLHELKSLLRSFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127 ++ +A SL L +R+ C + + A + ++IIG P + SG P Sbjct: 2 TVTTQATSLDNLLREIRACTLCSPALPHAPRPVLAA-SAQARVLIIGQAPGARVHASGVP 60 Query: 128 FSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP-------GNRNLSNIEMEICRPIIMR 180 +S +G L L + + P G+ ++ Sbjct: 61 WSDASGARLRAWLDVDDTTFYDTSKFAVVPIGFCFPGRGASGDLPPRPECAARWHEELLA 120 Query: 181 QIELISPKILLFIGNKTKNFFFNN-DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 + + ++ L +G + F L +W + HP + Sbjct: 121 HMSSV--RLTLLVGQYAQRFGLGKAFGPTLTDTLVRWREF-----GPQVVPLPHPSP--R 171 Query: 240 YPLI-KKNTW 248 K+N W Sbjct: 172 NIAWFKRNPW 181 >gi|118595106|ref|ZP_01552453.1| hypothetical protein MB2181_05520 [Methylophilales bacterium HTCC2181] gi|118440884|gb|EAV47511.1| hypothetical protein MB2181_05520 [Methylophilales bacterium HTCC2181] Length = 208 Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 22/165 (13%), Positives = 46/165 (27%), Gaps = 18/165 (10%) Query: 98 STICATQTEGQDLMIIGYTPSDSDNISG-KPFSGKT-GNMLDKMLQSIEI---------- 145 + + + L+I+G P +PF+G G +L + L Sbjct: 30 KPVPSFGDKDPFLLIVGLAPGMHGANQTGRPFTGDHAGIILYETLFKYGFSNKKDSTPND 89 Query: 146 --MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP-KILLFIGNKTKNFFF 202 I+ PP N + E+ C + ++ + ++L +G Sbjct: 90 NLQLVNCRITNAVKCLPPEN-KPNTDEVNNCNVFLTNEVNELRAGSVVLALGLIAHKAIL 148 Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247 + N + + + H K+ T Sbjct: 149 KSQGLIESHFKFSHGNRHILPNGLILYDSYHCS--RYNTQTKRLT 191 >gi|241762217|ref|ZP_04760299.1| Uracil-DNA glycosylase superfamily [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373264|gb|EER62883.1| Uracil-DNA glycosylase superfamily [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 212 Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 24/203 (11%), Positives = 50/203 (24%), Gaps = 29/203 (14%) Query: 85 RSFHDCHLCSTSLS------------TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131 R C ++ + + L I+G P N +G+PF+G Sbjct: 4 RDCPLCPRLASLRHDLQKEHPDWFNAPVPPFGDDDPWLAIVGLAPGMKGANRTGRPFTGD 63 Query: 132 T-GNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSNIEMEICRPI 177 G +L + L + + PP N+ + + Sbjct: 64 FAGILLYETLLKYGLATGHYQADINDGLKLKGTVVLNSVRCLPPQNKPTTQEMVTCRPFF 123 Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237 + K++L +G+ K I + + H Sbjct: 124 LGAMAHYPHLKVILALGHIAHQTILRAFGITLSSMPFKHGAAYQLSPEIQLVDSYHCS-- 181 Query: 238 IQYPLIKKNTWHALITLKKALKN 260 ++ T + + Sbjct: 182 RYNQNTRRLTEDMFQDVFAKIIE 204 >gi|114764515|ref|ZP_01443740.1| uracil-DNA glycosylase, putative [Pelagibaca bermudensis HTCC2601] gi|114543082|gb|EAU46101.1| uracil-DNA glycosylase, putative [Roseovarius sp. HTCC2601] Length = 198 Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 29/201 (14%), Positives = 57/201 (28%), Gaps = 25/201 (12%) Query: 77 LHELKSLLRSFHDCHLCSTSL------STICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130 L L L C + + G L+I P + + +PF Sbjct: 5 LTALADELSRCRLCAERFAATATRHSPRPVVWF-APGARLLIASQAPGMRAHNAARPFDD 63 Query: 131 KTGNMLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEICRPIIMRQIEL 184 +G L L + R+++ I ++ + +L + L Sbjct: 64 PSGIRLRAWLGLDDATFWDRSRVAIMPMAFCFPGYDAQGSDLPPPPICRHTWHDRLFAAL 123 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI- 243 ++ L+IG + T W + + HP + Sbjct: 124 GEVRLRLYIGGYAHRYHLGVKTGVTETVR-NWRDHLPD-----AIPLPHPSW--RNTAWL 175 Query: 244 KKNTW-HA--LITLKKALKNL 261 K+N W L L+ ++ + Sbjct: 176 KRNPWFEDELLPVLRARVREV 196 >gi|260432912|ref|ZP_05786883.1| uracil-DNA glycosylase superfamily protein [Silicibacter lacuscaerulensis ITI-1157] gi|260416740|gb|EEX09999.1| uracil-DNA glycosylase superfamily protein [Silicibacter lacuscaerulensis ITI-1157] Length = 206 Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 65/201 (32%), Gaps = 27/201 (13%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICA-----TQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 +L ++S C + T G ++I G P + SG+PF+ + Sbjct: 13 PDLIERIKSCRLCADRFEATPTAHEPRPIVWFQPGARVLIAGQAPGARVHRSGRPFTDPS 72 Query: 133 GNMLDKML---QSIEIMRTQIHISMISPWHPPGNRN-----LSNIEMEICRPIIMRQIEL 184 G+ L L ++ R Q I ++ P + I + +MR++ Sbjct: 73 GDRLRAWLGVSKTQFYDRAQFAIVPMAFCFPGYDARQADLPPPPICRKTWHAKVMRELGA 132 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI- 243 + + +G F + T W + A HP + Sbjct: 133 VPL--TVLVGGHAHRFHLGTRSSVTETVRA-WRDHAP-----RIFALPHPSW--RNTAWL 182 Query: 244 KKNTW---HALITLKKALKNL 261 KKN W L L+ ++ + Sbjct: 183 KKNPWFEAELLPVLRARVQEV 203 >gi|296328873|ref|ZP_06871384.1| DNA polymerase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296153994|gb|EFG94801.1| DNA polymerase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 198 Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 38/191 (19%), Positives = 69/191 (36%), Gaps = 12/191 (6%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 +LK S + L D++ +G P K S +G L Sbjct: 11 WEDLKFEAGSIGNELLPKDRQEVYIGMGDRNADILFVGNDPKLYLAEDYKVESKSSGAFL 70 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++L +E + +I+ +S +N + E + ++ QI LISPKI++F+G + Sbjct: 71 IRLLDVVEYLPETYYITTLSK-REIKIKNFNEEERKKLIDLLFMQILLISPKIVVFLGKE 129 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIKKNTW-----H 249 N G++ I T T + +I + KK + Sbjct: 130 VAQ-LIENKEIDFDNERGQFKKWRGD---IETYLTYDVETVIKARNDSGKKAAIALNFLN 185 Query: 250 ALITLKKALKN 260 + +K+ L N Sbjct: 186 DMKNIKERLNN 196 >gi|19704236|ref|NP_603798.1| DNA polymerase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19714464|gb|AAL95097.1| DNA polymerase, bacteriophage-type [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 195 Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 38/191 (19%), Positives = 69/191 (36%), Gaps = 12/191 (6%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 +LK S + L D++ +G P K S +G L Sbjct: 8 WEDLKFEAGSIGNELLPKDRQEVYIGMGDRNADILFVGNDPKLYLAEDYKVESKSSGAFL 67 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++L +E + +I+ +S +N + E + ++ QI LISPKI++F+G + Sbjct: 68 IRLLDVVEYLPETYYITTLSK-REIKIKNFNEEERKKLIDLLFMQILLISPKIVVFLGKE 126 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIKKNTW-----H 249 N G++ I T T + +I + KK + Sbjct: 127 VAQ-LIENKEIDFDNERGQFKKWRGD---IETYLTYDVETVIKARNDSGKKAAIALNFLN 182 Query: 250 ALITLKKALKN 260 + +K+ L N Sbjct: 183 DMKNIKERLNN 193 >gi|124006737|ref|ZP_01691568.1| uracil-DNA glycosylase [Microscilla marina ATCC 23134] gi|123987645|gb|EAY27345.1| uracil-DNA glycosylase [Microscilla marina ATCC 23134] Length = 195 Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 35/199 (17%), Positives = 70/199 (35%), Gaps = 24/199 (12%) Query: 75 CSLHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 +L L + +R+ C L + + A +MIIG P + SG P+ + Sbjct: 2 PALDHLLTEIRTCKVCEENLPLGARPVVSA--QTSAKIMIIGQAPGTKVHASGVPWDDAS 59 Query: 133 GNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189 G L + + + ++I I + +P + C P+ ++ P + Sbjct: 60 GQRLREWMGVDKETFYDTSKIAIMPMGFCYPGRGKGGDLPPRVECAPLWHERLLEQLPDL 119 Query: 190 L--LFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL-IKK 245 + L IG + ++ +K + + + + VHP + + +K Sbjct: 120 VLTLLIGQYAQKYYLGKQRKKNLTETVRAYHEYQPDY-----FPLVHPSP--RNLMWQRK 172 Query: 246 NTW-HA-----LITLKKAL 258 N W L + K L Sbjct: 173 NLWFEDEVVPALQAVVKKL 191 >gi|262172627|ref|ZP_06040305.1| uracil-DNA glycosylase [Vibrio mimicus MB-451] gi|261893703|gb|EEY39689.1| uracil-DNA glycosylase [Vibrio mimicus MB-451] Length = 190 Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 67/180 (37%), Gaps = 17/180 (9%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + +R C L + + + ++IIG P + + P++ +G+ Sbjct: 2 LESLLAEIRQCKVCEPHLPLGA-NPVI-RAHPAARILIIGQAPGTKVHNTSIPWNDASGD 59 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189 L + L + +I I + +P R+ + C P+ ++ P ++ Sbjct: 60 RLRQWLDLDRETFYCEEKIAIMPMGLCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQL 119 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248 L IG +N++ ++ + + +W L HP + L KK+ W Sbjct: 120 TLLIGQYAQNYYLSDKPATLTETVQQWQRWIPS-----VLPLPHPSP--RNTLWLKKHPW 172 >gi|149913660|ref|ZP_01902193.1| uracil-DNA glycosylase, putative [Roseobacter sp. AzwK-3b] gi|149812780|gb|EDM72609.1| uracil-DNA glycosylase, putative [Roseobacter sp. AzwK-3b] Length = 195 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 28/202 (13%), Positives = 61/202 (30%), Gaps = 25/202 (12%) Query: 77 LHELKSLLRSFHDCHLCSTSLST------ICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130 + +L + + S C T + L+I G P + SG PF Sbjct: 1 MPDLIADIDSCRLCAARFARTETGHAPRPVVWF-RPAARLLIAGQAPGARVHASGVPFDD 59 Query: 131 KTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSN-IEMEICRPIIMRQIELI- 185 +G+ L L ++ + ++ I ++ P + ++ IC Q+ Sbjct: 60 PSGDRLRDWLGLERAEFYDKERVAIVPMAFCFPGYDAKGADLAPPAICGRTWHAQVMARL 119 Query: 186 -SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHP-----QELIQ 239 ++ + +G + + + T HP L + Sbjct: 120 ARVRLSVIVGGYAQRYHMGAKGRVTETV------AAWRDHAPRVFPLPHPSWRNTAWLKR 173 Query: 240 YPLIKKNTWHALIT-LKKALKN 260 P + L +++ L + Sbjct: 174 NPWFEAELLPVLRAQVREVLDD 195 >gi|258624501|ref|ZP_05719445.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|258583198|gb|EEW08003.1| conserved hypothetical protein [Vibrio mimicus VM603] Length = 190 Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 67/180 (37%), Gaps = 17/180 (9%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + +R C L + + + ++IIG P + + P++ +G+ Sbjct: 2 LESLLAEIRQCKVCEPHLPLGA-NPVI-RAHPAAKILIIGQAPGTKVHNTSIPWNDASGD 59 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189 L + L + +I I + +P R+ + C P+ ++ P ++ Sbjct: 60 RLRQWLDLDRDTFYCEEKIAIMPMGLCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQL 119 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248 L IG +N++ ++ + + +W L HP + L KK+ W Sbjct: 120 TLLIGQYAQNYYLSDKPATLTETVQQWQRWIPS-----VLPLPHPSP--RNTLWLKKHPW 172 >gi|256845179|ref|ZP_05550637.1| DNA polymerase [Fusobacterium sp. 3_1_36A2] gi|256718738|gb|EEU32293.1| DNA polymerase [Fusobacterium sp. 3_1_36A2] Length = 195 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 67/191 (35%), Gaps = 12/191 (6%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 +LK S + L D++ +G P K S +G L Sbjct: 8 WEDLKFEAGSIGNELLPKDRQEVYIGMGDRNADILFVGNDPKLYLAEDYKVESKSSGAFL 67 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++L +E + +I+ IS +N + E + ++ QI LISPKI++F+G + Sbjct: 68 IRLLDVVEYLPETYYITTISK-REIKIKNFNEEERKKLIDLLFMQILLISPKIVVFLGKE 126 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIKKNTW-----H 249 N G++ T + +I + KK + Sbjct: 127 VAQ-LIENKEIDFDNERGQFKKWRGDVETYL---TYDVETVIKARNDSGKKAAIALNFLN 182 Query: 250 ALITLKKALKN 260 + +K+ L N Sbjct: 183 DMKNIKERLNN 193 >gi|294782630|ref|ZP_06747956.1| DNA polymerase, bacteriophage-type [Fusobacterium sp. 1_1_41FAA] gi|294481271|gb|EFG29046.1| DNA polymerase, bacteriophage-type [Fusobacterium sp. 1_1_41FAA] Length = 195 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 67/190 (35%), Gaps = 12/190 (6%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 ELK L S L D++ IG P + K + +G L Sbjct: 8 WEELKFELGSVGIETLPKDKQEIYIGMGNRNADVLFIGNDPKLYLSEDYKVEAQSSGEFL 67 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++ I+ +I+ ++ +N E +I ++ QI LISPKI++F+G + Sbjct: 68 IRLFDLAGIVPEAYYITTLTK-REVKIKNFDVEEKKILLDLLNMQIALISPKIIVFLGKE 126 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIKKNT-----WH 249 N + GK+ I T + +I + KK W Sbjct: 127 VAQMI-ENREVDLEKERGKFKKWKGD---IECYLTYDVETVIKARNESGKKAAVATNFWL 182 Query: 250 ALITLKKALK 259 + +K+ L Sbjct: 183 DIKNIKERLD 192 >gi|56695852|ref|YP_166203.1| uracil-DNA glycosylase, putative [Ruegeria pomeroyi DSS-3] gi|56677589|gb|AAV94255.1| uracil-DNA glycosylase, putative [Ruegeria pomeroyi DSS-3] Length = 208 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 61/201 (30%), Gaps = 29/201 (14%) Query: 80 LKSLLRSFHDCHLCSTSLST------ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 L +R+ C + T + G L+I G P + SG+PF+ +G Sbjct: 9 LIERIRACRLCADRFAATHTAHEPRPVVWF-RPGARLLIAGQAPGARVHASGRPFTDPSG 67 Query: 134 NMLDKML---QSIEIMRTQIHISMISPWHPPGNR-----NLSNIEMEICRPIIMRQIELI 185 + L L + R+++ + ++ P N + + +M ++ + Sbjct: 68 DRLRDWLGIGEETFYDRSRVAVVPMAFCFPGYNSQGADLPPPPVCGKTWHNQVMGELGEM 127 Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQY 240 + +G + + T A HP L + Sbjct: 128 PLS--VLVGGHALKYHLGARSPVTETV------AAWRDHAPRVFALPHPSWRNTGWLRKN 179 Query: 241 PLIKKNTWHALIT-LKKALKN 260 P + L +K+ L Sbjct: 180 PWFEAELLPVLRARVKEVLNE 200 >gi|295688763|ref|YP_003592456.1| uracil-DNA glycosylase superfamily protein [Caulobacter segnis ATCC 21756] gi|295430666|gb|ADG09838.1| Uracil-DNA glycosylase superfamily [Caulobacter segnis ATCC 21756] Length = 194 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 63/184 (34%), Gaps = 21/184 (11%) Query: 76 SLHELKSLLRSFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 SL L S + + C + + E ++I G P + +G PF+ +G Sbjct: 2 SLDALLSDIAACRACAPYLPHAPRPV-TRVREETRILIAGQAPGRLVHETGLPFNDPSGV 60 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHP-----PGNRNLSNIEMEICRPIIMRQIELIS 186 L + + + R +I ++ ++ P G+ R ++ Q+ + Sbjct: 61 RLRQWMGIDRETFYGRPEIGVAAMAFCFPGTNPKGGDYPPPPRCAATWRARLLEQLP--N 118 Query: 187 PKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-K 244 ++ L +G+ + + + + W + L HP + K Sbjct: 119 IELTLLVGSYAQAWALPGRTGKTMTDTIAAWRDF-----GPNVLPLPHPSW--RNTAWLK 171 Query: 245 KNTW 248 +N W Sbjct: 172 RNPW 175 >gi|282850839|ref|ZP_06260213.1| uracil-DNA glycosylase, family 4 [Lactobacillus gasseri 224-1] gi|282557791|gb|EFB63379.1| uracil-DNA glycosylase, family 4 [Lactobacillus gasseri 224-1] Length = 112 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 28/68 (41%) Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160 LMIIG P + S PF G +G L K L SI + R ++I+ P Sbjct: 25 FGAGPAHPKLMIIGEAPGREEIESLIPFHGASGKELMKSLASIGLKREDVYITSAVRSRP 84 Query: 161 PGNRNLSN 168 + + + Sbjct: 85 YSVKKVFS 92 >gi|323492058|ref|ZP_08097220.1| uracil-DNA glycosylase [Vibrio brasiliensis LMG 20546] gi|323313619|gb|EGA66721.1| uracil-DNA glycosylase [Vibrio brasiliensis LMG 20546] Length = 195 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 67/177 (37%), Gaps = 19/177 (10%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L EL +R+ C L + I A ++ L+IIG P + + P++ +GN Sbjct: 2 LDELLQQVRACRLCEPELPLGANPIIQA--SKSASLLIIGQAPGTRVHETSIPWNDPSGN 59 Query: 135 MLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK--I 189 L + L +++ I + +P + + C P + I P + Sbjct: 60 RLREWLDLDSETFYDASKVAIMPMGLCYPGKGNSGDLPPRKECAPQWHKSILDQLPNVGM 119 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYP 241 L IG +N++ +N + + + +W + +P HP L + P Sbjct: 120 TLLIGQYAQNYYLSNKPKTLTETVQQWHRWAPRYLPLP-----HPSPRNTLWLRKNP 171 >gi|295690032|ref|YP_003593725.1| uracil-DNA glycosylase superfamily protein [Caulobacter segnis ATCC 21756] gi|295431935|gb|ADG11107.1| Uracil-DNA glycosylase superfamily [Caulobacter segnis ATCC 21756] Length = 225 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 29/209 (13%), Positives = 59/209 (28%), Gaps = 41/209 (19%) Query: 88 HDCHLCST-----SLS----------TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131 DC LC + + + L+++G P N +G+PF+G Sbjct: 20 RDCPLCPRLVAYRRENQDLYPDWFNGPAPSFGDKDARLLVVGLAPGRKGANRTGRPFTGD 79 Query: 132 T-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177 G +L L ++ PPGN+ ++ E + Sbjct: 80 YAGTLLYDTLIKFGFATGKFEARPDDSLNLVGSAVTNAVRCAPPGNKPETSEENNCRPFL 139 Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237 R + K ++ +G+ ++ K + + H L Sbjct: 140 TTRLEMFPNLKAIVTLGDVSRRNVLKALGLKASAGI-PGHGSEFQAGPYRIFNSYHCSRL 198 Query: 238 ------IQYPLIKKNTWHALITLKKALKN 260 + P+ ++ +K L Sbjct: 199 NTNTGRLTTPMFEEL----FARVKAYLDE 223 >gi|254487601|ref|ZP_05100806.1| uracil-DNA glycosylase superfamily protein [Roseobacter sp. GAI101] gi|214044470|gb|EEB85108.1| uracil-DNA glycosylase superfamily protein [Roseobacter sp. GAI101] Length = 195 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 28/199 (14%), Positives = 65/199 (32%), Gaps = 25/199 (12%) Query: 79 ELKSLLRSFHDCHLCSTSL------STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 +++ L++ C + + + G L+I P + + PF ++ Sbjct: 3 DIRDRLQACTLCADRFAATATAHRPNPVVWF-QPGARLLIASQAPGLRVHEANTPFWDQS 61 Query: 133 GNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNL---SNIEMEICRPIIMRQIELIS 186 G L L ++ R+++ I ++ P + + + Sbjct: 62 GKRLRDWLGLDEAAFYDRSRVAIIPMAFCFPGYDTKSSDLPPPPVCARTWRTGALATVPD 121 Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KK 245 ++ + IG + D + + W + A HP + KK Sbjct: 122 IRLTILIGGHAMRYHL-PDFTTVTRAVADWRDHPPG-----VFALPHPSW--RNTAWLKK 173 Query: 246 NTW--HALI-TLKKALKNL 261 N W ++ L+ A+K++ Sbjct: 174 NPWFEEDVLPRLRAAVKDV 192 >gi|71907665|ref|YP_285252.1| uracil-DNA glycosylase superfamily protein [Dechloromonas aromatica RCB] gi|71847286|gb|AAZ46782.1| Uracil-DNA glycosylase superfamily [Dechloromonas aromatica RCB] Length = 215 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 45/154 (29%), Gaps = 19/154 (12%) Query: 99 TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIE------------ 144 + A + +L+++G P + N +G+PF+G G +L L Sbjct: 34 PVPAFGSLDAELLVVGLGPGEKGANRTGRPFTGDVAGELLYPALHRFGFASSPEPLGSDG 93 Query: 145 -----IMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199 + T I+ PP N+ + + + + KI++ +G Sbjct: 94 WANPTMQLTNCRITNAVRCLPPANKPTTAEIRQCNAHLKAELAAMPKLKIIVVLGAIAHQ 153 Query: 200 FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 K + + H Sbjct: 154 ALLWTYGLKAKDLPFGHHVTHKLPDGRTLVTSYH 187 >gi|303235194|ref|ZP_07321813.1| uracil-DNA glycosylase family protein [Finegoldia magna BVS033A4] gi|302493681|gb|EFL53468.1| uracil-DNA glycosylase family protein [Finegoldia magna BVS033A4] Length = 190 Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 65/193 (33%), Gaps = 22/193 (11%) Query: 80 LKSLLRSFHDCHLCSTS-LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDK 138 +K L + + + ++ I ++IIG P + +G F+ K+G L K Sbjct: 7 IKKLREDCRN-EIYTNRGINPIF-QLNPKSKILIIGQAPGEKVEETGILFNDKSGENLVK 64 Query: 139 MLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE------LISPKILLF 192 L E + I P + + + R I ++ L K+ + Sbjct: 65 WLGISEDILHSED-FSIIPMDFYYPGKGKSGD-KAPRSFIAKEYHPLLLNELKDIKLTIL 122 Query: 193 IGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKN 246 IG + F+ + +K + + + + HP + + P ++ Sbjct: 123 IGAYAQKFYLKDKFKKNLTETVKSYKEFLPEY-----FPIAHPSPLNNRWISKNPFFREE 177 Query: 247 TWHALITLKKALK 259 L + K L+ Sbjct: 178 VLPDLKKIVKKLR 190 >gi|261218775|ref|ZP_05933056.1| uracil-DNA glycosylase [Brucella ceti M13/05/1] gi|260923864|gb|EEX90432.1| uracil-DNA glycosylase [Brucella ceti M13/05/1] Length = 207 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 25/195 (12%), Positives = 60/195 (30%), Gaps = 20/195 (10%) Query: 77 LHELKSLLRSFHDC---HL----CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129 + EL+ +++ C L + +C + I G P + + PF+ Sbjct: 1 MDELRHSIQACRLCRDTPLFPPPLPHEPNPVCIISDT-ARIAICGQAPGIRVHNTSLPFN 59 Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEICRPIIMRQIE 183 +G+ L + L + ++ I + + +L Sbjct: 60 DPSGDRLRQWLGVTREEFYDASRFAIVPMGFCFPGYDKNGGDLPPRRECRQTWHDRVFAA 119 Query: 184 LISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNL--CTPHSIIPTLATVHPQELIQY 240 + + +L +G + + + + + W + H+ L HP + Sbjct: 120 MPQLEFILVVGQYALAYHLPDYRGRNLTETVKNWRHFMETPSHTGRIALPLPHPSW--RN 177 Query: 241 PLI-KKNTWHALITL 254 K+N W + + Sbjct: 178 SGWLKRNPWFDMEVV 192 >gi|307945356|ref|ZP_07660692.1| uracil-DNA glycosylase superfamily protein [Roseibium sp. TrichSKD4] gi|307771229|gb|EFO30454.1| uracil-DNA glycosylase superfamily protein [Roseibium sp. TrichSKD4] Length = 206 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 72/209 (34%), Gaps = 28/209 (13%) Query: 77 LHELKSLLRSFHDCHLCSTS--LSTICATQTE------GQDLMIIGYTPSDSDNISGKPF 128 + EL +L+ C +C+ + + L I G P + SG+PF Sbjct: 1 MAELPALVEDIRACRICADNPDKLPLPHDPRPVLQVSETARLCICGQAPGTRVHKSGRPF 60 Query: 129 SGKTGNMLDKML---QSIEIMRTQIHISMISPWHP-----PGNRNLSNIEMEICRPIIMR 180 + +G+ L + + I ++ I + P G+ + + Sbjct: 61 TDPSGDRLRDWMGIGEDIFYDPQKLAIIPMGFCFPGLDAKGGDLPPRPECRKAWHDDLFE 120 Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTP---HSIIPTLATVHPQE 236 L +++L IG + + +K+ + + W + ++ L HP Sbjct: 121 --ALPQIELILVIGQYAQGYHLGKSRKKSLTETVAHWRDFWDECSSNNKPKVLPLPHPSW 178 Query: 237 LIQYPLI-KKNTW--HALI-TLKKALKNL 261 + KKN W L+ LK+ + L Sbjct: 179 --RNNAWIKKNPWFETDLLPVLKQEVARL 205 >gi|261250481|ref|ZP_05943056.1| uracil-DNA glycosylase [Vibrio orientalis CIP 102891] gi|260939050|gb|EEX95037.1| uracil-DNA glycosylase [Vibrio orientalis CIP 102891] Length = 191 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 67/188 (35%), Gaps = 28/188 (14%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQT-----EGQDLMIIGYTPSDSDNISGKPFSGK 131 L +L +R+ C + E L+IIG P + + P++ Sbjct: 2 LDDLLQQVRACRLCE-----ENLPFGANPVIQASESAKLLIIGQAPGTRVHETSIPWNDP 56 Query: 132 TGNMLDKMLQ---SIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIEL 184 +GN L + L+ +Q+ I + +P G+ ++ Q+ Sbjct: 57 SGNRLREWLELDKETFYDESQVAIMPMGLCYPGKGTSGDLPPRKECAPKWHQAVLEQLP- 115 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI- 243 + + L IG +N++ N+ + + + +W + +P HP + L Sbjct: 116 -NVGMTLLIGQYAQNYYLNDKPKTLTETVQQWQRWAPTYLPLP-----HPSP--RNTLWL 167 Query: 244 KKNTW-HA 250 KKN W Sbjct: 168 KKNPWFED 175 >gi|103487036|ref|YP_616597.1| uracil-DNA glycosylase superfamily protein [Sphingopyxis alaskensis RB2256] gi|98977113|gb|ABF53264.1| Uracil-DNA glycosylase superfamily [Sphingopyxis alaskensis RB2256] Length = 220 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 49/180 (27%), Gaps = 35/180 (19%) Query: 85 RSFHDCHLCSTSLS------------TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131 R C + A L + G P N +G+PF+G Sbjct: 14 RDCSRCPRLVALRQECQAEHPDWWNAPVPAFGDPDAWLALAGLAPGKHGANRTGRPFTGD 73 Query: 132 T-GNMLDKMLQSIEIMRTQIH-------------ISMISPWHPPGNRNLSNIEMEICRPI 177 G++L + L + + R I PP N + E+ CRP Sbjct: 74 YAGDLLFRALAAFGLSRGDYDARIDDGLTLDGAIIVNSVKCLPPQN-KPAPAEIANCRPF 132 Query: 178 IMRQIEL-ISPKILLFIGNKTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 RQ+ ++++ +G G L + + H Sbjct: 133 FERQLAALPKVRVIVALGRIAHVAVLRATGARLAAHPFAHGAVHALP---DGRHLVDSYH 189 >gi|94497374|ref|ZP_01303945.1| hypothetical protein SKA58_07468 [Sphingomonas sp. SKA58] gi|94423237|gb|EAT08267.1| hypothetical protein SKA58_07468 [Sphingomonas sp. SKA58] Length = 222 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 26/193 (13%), Positives = 49/193 (25%), Gaps = 19/193 (9%) Query: 56 IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115 + + Q+ L L+ R+ H + + A + IIG Sbjct: 1 MTVESPLASTEPPKDCQRCPRLVALREECRAEH--PDWWNA--PVPAFGDPKARIAIIGL 56 Query: 116 TPSDSD-NISGKPFSGKT-GNMLDKMLQSIEIMRTQI-------------HISMISPWHP 160 P N +G+PF+G G++L L + I P Sbjct: 57 APGRQGANRTGRPFTGDYAGDLLFATLARHGLAEGSYEARPDDGLVLRDVIIINSVKCLP 116 Query: 161 PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220 P N+ + L + + + +G K + Sbjct: 117 PQNKPEPAEIHNCRPFLADGVAALPNARTFIALGQIAHQSAVKVLGGKLPKARFAHLAEH 176 Query: 221 TPHSIIPTLATVH 233 + + H Sbjct: 177 RMPDGRILIDSYH 189 >gi|194292281|ref|YP_002008188.1| hypothetical protein RALTA_B1539 [Cupriavidus taiwanensis LMG 19424] gi|193226185|emb|CAQ72134.1| conserved hypothetical protein; Uracil-DNA glycosylase superfamily [Cupriavidus taiwanensis LMG 19424] Length = 210 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 74/201 (36%), Gaps = 19/201 (9%) Query: 72 QKACSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129 ++ +L L + +R+ C HL + A ++I+G P + +G P++ Sbjct: 10 RQPAALEALLAEVRACRACAQHLPLGPRPVVRAD--AAARILIVGQAPGTRVHETGIPWN 67 Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186 +G L + L + +Q I + +P ++ N C P+ M ++ Sbjct: 68 DASGERLRQWLGVDDATFCDASQFAIIPMGLCYPGRGKSGDNPPRPECAPLWMDRLLAQL 127 Query: 187 PKI--LLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI 243 P I L +G + F + T + + W + + HP P Sbjct: 128 PSIALTLLVGQYAQRHFLGARRKPTLTETVRAWRDYAPAF-----IPLPHPSP-RNQPWF 181 Query: 244 KKNTW---HALITLKKALKNL 261 +++ W L L++ + + Sbjct: 182 RQHPWFEAEVLPMLRERVARI 202 >gi|85704398|ref|ZP_01035500.1| uracil-DNA glycosylase, putative [Roseovarius sp. 217] gi|85670806|gb|EAQ25665.1| uracil-DNA glycosylase, putative [Roseovarius sp. 217] Length = 195 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 64/196 (32%), Gaps = 23/196 (11%) Query: 79 ELKSLLRSFHDCHLCSTSLSTICA-----TQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 +L S +R+ C + T + L+I G P + SGKPF +G Sbjct: 3 DLPSEIRACRLCADRFAASETAHSPRPVVWFQPSARLLIAGQAPGLRVHQSGKPFDDPSG 62 Query: 134 NMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC---RPIIMRQIELISP 187 + L L ++++ I ++ P + S++ L + Sbjct: 63 DRLRNWLGLSPCEFYDKSRVAIVPMAFCFPGYDAKGSDLPPPRICGKTWHARVMQALDNV 122 Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKN 246 K+ + +G + Q + W + +P HP + +K+ Sbjct: 123 KLTVLVGGYAHKYHLGVKTGV-TQTVEAWRDHAPRIFTLP-----HPSW--RNTAWLRKH 174 Query: 247 TW---HALITLKKALK 259 W L L+ ++ Sbjct: 175 PWFEAEVLPELRAQIQ 190 >gi|254254134|ref|ZP_04947451.1| Uracil-DNA glycosylase [Burkholderia dolosa AUO158] gi|124898779|gb|EAY70622.1| Uracil-DNA glycosylase [Burkholderia dolosa AUO158] Length = 206 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 33/200 (16%), Positives = 62/200 (31%), Gaps = 25/200 (12%) Query: 76 SLHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 SL L + +R+ C L + A ++I+G P + SG P+ +G Sbjct: 8 SLDVLLTEIRACRACEADLPLGPRPVVRA--HRDARILIVGQAPGARVHASGIPWDDASG 65 Query: 134 NMLDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIELIS 186 L L T+ I + +P G+ + ++ ++ I Sbjct: 66 KRLRDWLGVDADTFYDDTRFAIVPMGFCYPGRGAGGDNPPRPECAALWLDRLLAELPSI- 124 Query: 187 PKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-K 244 ++ L IG + F + W + L HP + K Sbjct: 125 -RLTLLIGQYAQRHFLRTARKATLTDTVRAWRDY-----GADVLPLPHPSP--RNQAWFK 176 Query: 245 KNTWHALI---TLKKALKNL 261 + W L++ + L Sbjct: 177 HHPWFDAQVVPELRRRVAPL 196 >gi|167645686|ref|YP_001683349.1| uracil-DNA glycosylase superfamily protein [Caulobacter sp. K31] gi|167348116|gb|ABZ70851.1| Uracil-DNA glycosylase superfamily [Caulobacter sp. K31] Length = 225 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 25/176 (14%), Positives = 50/176 (28%), Gaps = 31/176 (17%) Query: 88 HDCHLCST-----SLS----------TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131 DC LC + + + L+++G P N +G+PF+G Sbjct: 20 RDCPLCPRLVAYRRENQDLYPDWFNGPAPSFGDKDARLLVVGLAPGRKGANRTGRPFTGD 79 Query: 132 T-GNMLDKMLQSIEIMRTQIH-------------ISMISPWHPPGNRNLSNIEMEICRPI 177 G +L L + ++ PPGN+ ++ E + Sbjct: 80 YAGTLLYDTLIKYGFATGKFEARPDDSLKLIGSAVTNAVRCAPPGNKPETSEENNCRPFL 139 Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 R K ++ +G+ ++ K + + H Sbjct: 140 TARLEMFPQLKAIVTLGDVSRRNLLKALGLKASAGV-PGHGSEFQAGPYRVFNSYH 194 >gi|17546048|ref|NP_519450.1| hypothetical protein RSc1329 [Ralstonia solanacearum GMI1000] gi|17428344|emb|CAD15031.1| probable uracil-dna glycosylase protein [Ralstonia solanacearum GMI1000] Length = 198 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 57/191 (29%), Gaps = 22/191 (11%) Query: 78 HELKSLLRSFHDCHLCSTS-----LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 S L C LC + + A ++I+G P + +G P++ ++ Sbjct: 4 AAFASCLHDIRACRLCEGALPHEPRPVVLAD--RRARVLIVGQAPGRIVHETGIPWNDRS 61 Query: 133 GNMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP-- 187 G+ L + L+ +I + + P N C P R + P Sbjct: 62 GDRLREWLRIGYDAFYADRRIAVVPMGFCFPGTGPNGDLPPRPACAPQWHRPLLTAMPDL 121 Query: 188 KILLFIGNKTKNFFFNNDAQKTYQ---NLGKWSNLCTPHSIIPTLATVHPQELIQYPLI- 243 K+ L +G + ++ + G + HP + Sbjct: 122 KLALLVGGYAQRYYLDVPRGMPLTEVVRRGPVRDAE----GRVLFPLPHPSP--RNLAWF 175 Query: 244 KKNTWHALITL 254 K N W + Sbjct: 176 KHNPWFDAQIV 186 >gi|260779572|ref|ZP_05888462.1| uracil-DNA glycosylase [Vibrio coralliilyticus ATCC BAA-450] gi|260604381|gb|EEX30685.1| uracil-DNA glycosylase [Vibrio coralliilyticus ATCC BAA-450] Length = 210 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 60/183 (32%), Gaps = 19/183 (10%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L +L +R C L + I A ++ L+IIG P + + P++ +G+ Sbjct: 2 LEDLLQQIRQCRLCEPNLPLGANPIIQA--SKEAKLLIIGQAPGTRVHKTSIPWNDPSGD 59 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNL-----SNIEMEICRPIIMRQIELISPKI 189 L + L+ + I P + + +L + + Sbjct: 60 RLRQWLKLDKTAFYDATKIAIMPMGLCYPGKGKSGDLPPRKECAPQWHSKVLEQLPNIGM 119 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIK 244 L IG +N++ + + + + W + +P HP L + P + Sbjct: 120 TLLIGQYAQNYYLQDKPKTLTETVRAWQQWAPHYLPLP-----HPSPRNTLWLKRNPWFE 174 Query: 245 KNT 247 Sbjct: 175 AEV 177 >gi|319938544|ref|ZP_08012937.1| uracil-DNA glycosylase superfamily protein [Coprobacillus sp. 29_1] gi|319806308|gb|EFW02984.1| uracil-DNA glycosylase superfamily protein [Coprobacillus sp. 29_1] Length = 196 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 28/174 (16%), Positives = 61/174 (35%), Gaps = 14/174 (8%) Query: 73 KACSLHELKSLLRSFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 + ++LK L S C + + +M I PS +GKPF+ Sbjct: 2 SIDAFNKLKEELLSCQKCKDIFENDPRPVF-QGNRDSVIMQISQAPSQKVMETGKPFNDA 60 Query: 132 TG-NMLDKML---QSIEIMRTQIHISMISPWHPPGNRN--LSNIEMEICRPIIMRQIELI 185 +G +L + +I+ + +P + + +++ +I Sbjct: 61 SGRKLLKDWYQITREEFDNPQYFYITSVGRCYPGKAKTTGDIPPPTHCADYFLKKELNII 120 Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239 P+I + IG+ + F N+ ++ +++ + L HP L + Sbjct: 121 EPQIYIIIGSYAAKYLFPNETLESLI----FNDHIFQGRPLYVLP--HPSPLNR 168 >gi|76803172|ref|YP_331267.1| uracil-DNA glycosylase-like protein [Natronomonas pharaonis DSM 2160] gi|76559037|emb|CAI50635.1| uracil-DNA glycosylase homolog [Natronomonas pharaonis DSM 2160] Length = 218 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 46/136 (33%), Gaps = 15/136 (11%) Query: 82 SLLRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSD----SDNISGKPFSGK----- 131 +L C L + L+I+G P +D G ++G Sbjct: 15 ALADDCQRCPELADCRTEISWGVGSSDATLVIVGEAPGAGNPDADRWRGGNYTGMSYTAQ 74 Query: 132 -TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI----EMEICRPIIMRQIELIS 186 +G + ++ +S+E +++ + P + E + CRP ++ ++ I Sbjct: 75 HSGRRIRELFESLEYAPDELYFTNAVKCFPSDGEGSNREPTSKERDNCRPYLLEELTAIE 134 Query: 187 PKILLFIGNKTKNFFF 202 P ++ G Sbjct: 135 PACVVPTGRHATETLL 150 >gi|296121641|ref|YP_003629419.1| uracil-DNA glycosylase superfamily [Planctomyces limnophilus DSM 3776] gi|296013981|gb|ADG67220.1| Uracil-DNA glycosylase superfamily [Planctomyces limnophilus DSM 3776] Length = 236 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 32/203 (15%), Positives = 56/203 (27%), Gaps = 47/203 (23%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTI-------------CATQTEG----------QDLMII 113 L L + S C + L+II Sbjct: 5 LEHLNQHIVSCERCPRLRAWCQDVAREKKREFMADNYWGRPVPNLLPIPTQTHVGKLLII 64 Query: 114 GYTPSDSD-NISGKPFSG-KTGNMLDKMLQSIEI-----MRTQIHISMISPWHPPGNRNL 166 G P+ N +G+ F+G ++G L + L R +S + Sbjct: 65 GLAPAAHGANRTGRMFTGDRSGEWLYRALHKAGFANQPASRHLDDGLTLSRCAITAVCHC 124 Query: 167 SNI-------EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN-------DAQKTYQN 212 + E+ C+ + + IE P++ L +G ++ +Q Sbjct: 125 APPDNKPGKLEIVNCQEYLTQTIEFFKPQVFLALGQIAWKSLMDHAKAHELLSSQPVKFA 184 Query: 213 LGKWSNLCTPHSIIPTLATVHPQ 235 G S LA+ HP Sbjct: 185 HGASITFNDGRSG---LASYHPS 204 >gi|171321412|ref|ZP_02910363.1| Uracil-DNA glycosylase superfamily [Burkholderia ambifaria MEX-5] gi|171093315|gb|EDT38512.1| Uracil-DNA glycosylase superfamily [Burkholderia ambifaria MEX-5] Length = 199 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 58/185 (31%), Gaps = 22/185 (11%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + +R+ C L + A ++I+G P + SG P+ +G Sbjct: 9 LDVLLTEIRACRACEADLPLGPRPVVRA--HRDARILIVGQAPGARVHASGIPWDDASGK 66 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIELISP 187 L L T+ I + +P G+ ++ ++ ++ I Sbjct: 67 RLRDWLGVDADTFYDETRFAIVPMGFCYPGRGASGDNPPRPECAQLWIDRLIAELPSI-- 124 Query: 188 KILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KK 245 ++ L IG + F + + W + L HP + K Sbjct: 125 RLTLLIGQYAQRHFLRDTRKATLTDTVQAWRDY-----GPDVLPLPHPSP--RNQAWFKH 177 Query: 246 NTWHA 250 + W Sbjct: 178 HPWFD 182 >gi|315303980|ref|ZP_07874428.1| uracil-DNA glycosylase superfamily protein [Listeria ivanovii FSL F6-596] gi|313627649|gb|EFR96334.1| uracil-DNA glycosylase superfamily protein [Listeria ivanovii FSL F6-596] Length = 191 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 55/170 (32%), Gaps = 16/170 (9%) Query: 76 SLHELKSLLRSFHDCHLCST--SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 + L+ + C + + +M I PS + + + PF +G Sbjct: 2 NFETLEEEILKCDLCKEKFGFEPHPIVF--GNKKSKIMQISQAPSQNVHKTLTPFDDASG 59 Query: 134 NMLDKMLQ----SIEIMRTQIHISMISPWHPPGNRNLSNI--EMEICRPIIMRQIELISP 187 + L +I+ I+ +P + N + + +++E+I Sbjct: 60 HKLRNEWYQISDEEFYNPDNFYITSIAHCYPGKSANGGDRLPPKICATKWLTKEVEVIDN 119 Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237 +I + +G K +FFF + K N P HP L Sbjct: 120 EIYIILGAKAASFFFPKENYXXXIFSNKEINHK------PVFVLPHPSPL 163 >gi|221196315|ref|ZP_03569362.1| uracil DNA glycosylase superfamily [Burkholderia multivorans CGD2M] gi|221202988|ref|ZP_03576007.1| uracil DNA glycosylase superfamily [Burkholderia multivorans CGD2] gi|221209947|ref|ZP_03582928.1| uracil DNA glycosylase superfamily [Burkholderia multivorans CGD1] gi|221170635|gb|EEE03101.1| uracil DNA glycosylase superfamily [Burkholderia multivorans CGD1] gi|221176922|gb|EEE09350.1| uracil DNA glycosylase superfamily [Burkholderia multivorans CGD2] gi|221182869|gb|EEE15269.1| uracil DNA glycosylase superfamily [Burkholderia multivorans CGD2M] Length = 199 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 58/183 (31%), Gaps = 18/183 (9%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + +R+ C L + A ++I+G P + SG P+ +G Sbjct: 9 LDVLLTEIRACRACEADLPLGPRPVVRA--HRDARILIVGQAPGARVHASGIPWDDASGK 66 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189 L L T+ I + +P + N C P+ + ++ P ++ Sbjct: 67 RLRDWLGVDADTFYDDTRFAIVPMGFCYPGRGASGDNPPRAECAPLWLERLLAELPSIRL 126 Query: 190 LLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247 L IG + F + + W + L HP + K + Sbjct: 127 TLLIGQYAQRHFLRDTRKPTLTDTVAAWRDY-----GPDVLPLPHPSP--RNQAWFKHHP 179 Query: 248 WHA 250 W Sbjct: 180 WFD 182 >gi|161520688|ref|YP_001584115.1| uracil-DNA glycosylase superfamily protein [Burkholderia multivorans ATCC 17616] gi|189353127|ref|YP_001948754.1| uracil-DNA glycosylase superfamily protein [Burkholderia multivorans ATCC 17616] gi|160344738|gb|ABX17823.1| Uracil-DNA glycosylase superfamily [Burkholderia multivorans ATCC 17616] gi|189337149|dbj|BAG46218.1| uracil-DNA glycosylase superfamily protein [Burkholderia multivorans ATCC 17616] Length = 199 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 58/183 (31%), Gaps = 18/183 (9%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + +R+ C L + A ++I+G P + SG P+ +G Sbjct: 9 LDVLLTEIRACRACEADLPLGPRPVVRA--HRDARILIVGQAPGARVHASGIPWDDASGK 66 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189 L L T+ I + +P + N C P+ + ++ P ++ Sbjct: 67 RLRGWLGVDADTFYDDTRFAIVPMGFCYPGRGASGDNPPRAECAPLWLERLLAELPSIRL 126 Query: 190 LLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247 L IG + F + + W + L HP + K + Sbjct: 127 TLLIGQYAQRHFLRDTRKPTLTDTVAAWRDY-----GPDVLPLPHPSP--RNQAWFKHHP 179 Query: 248 WHA 250 W Sbjct: 180 WFD 182 >gi|124516381|gb|EAY57889.1| putative uracil-DNA glycosylase [Leptospirillum rubarum] Length = 219 Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 55/187 (29%), Gaps = 29/187 (15%) Query: 98 STICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQSIEIMRTQ------ 149 + L IIG P+ N +G+ F+G ++G+ L + L R Sbjct: 32 RPLPGFGDPEALLWIIGLAPAAHGGNRTGRVFTGDRSGDFLFRCLYETGWSRYPTVWGRE 91 Query: 150 -------IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIEL-ISPKILLFIGNKTKN-- 199 IS PP N S E CRP + R+ + +L +G Sbjct: 92 DGQTLFGTWISAAVRCAPPENS-PSPEEFLRCRPFLEREFRQLTNVLAVLVLGALALREW 150 Query: 200 -FFFNNDAQKTYQ-----NLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253 + G P+ + HP + + T + Sbjct: 151 MMLLGKHDPSLLRKKPSFVHGTHMVFPHPY--PRLFISYHPSQ--RNTQTGLLTKDMMCR 206 Query: 254 LKKALKN 260 L + ++ Sbjct: 207 LLREIRA 213 >gi|312884775|ref|ZP_07744476.1| uracil-DNA glycosylase [Vibrio caribbenthicus ATCC BAA-2122] gi|309367688|gb|EFP95239.1| uracil-DNA glycosylase [Vibrio caribbenthicus ATCC BAA-2122] Length = 192 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 66/177 (37%), Gaps = 19/177 (10%) Query: 77 LHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L +L + +R+ C L I A ++IIG P + + P++ +G Sbjct: 2 LEQLLTEIRACRVCQNELPLGCNPIIQA--ASSAKILIIGQAPGLKVHQTSTPWNDPSGQ 59 Query: 135 MLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189 L + LQ Q+ I + +P ++ + C P+ QI + P K+ Sbjct: 60 RLRQWLQIDSDTFYNPHQVAIMPMGLCYPGKGKSGDLPPRKECAPLWHHQILPLLPQIKL 119 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYP 241 L IG +N++ + + + + +W +P HP L + P Sbjct: 120 TLLIGQYAQNYYLYDKPKTLTETVRQWQKWAPHFLPLP-----HPSPRNTLWLRKNP 171 >gi|115358692|ref|YP_775830.1| uracil-DNA glycosylase superfamily protein [Burkholderia ambifaria AMMD] gi|115283980|gb|ABI89496.1| Uracil-DNA glycosylase superfamily [Burkholderia ambifaria AMMD] Length = 199 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 57/185 (30%), Gaps = 22/185 (11%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + +R+ C L + A ++I+G P + SG P+ +G Sbjct: 9 LDVLLTEIRACRACEADLPLGPRPVVRA--HRDARILIVGQAPGARVHASGIPWDDASGK 66 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIELISP 187 L L T+ I + +P G+ + ++ ++ I Sbjct: 67 RLRDWLGVDADTFYDETRFAIVPMGFCYPGRGASGDNPPRPECAPLWIDRLLAELPSI-- 124 Query: 188 KILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KK 245 ++ L IG + F + + W + L HP + K Sbjct: 125 RLTLLIGQYAQRHFLRDTRKATLTDTVQAWRDY-----GPDVLPLPHPSP--RNQAWFKH 177 Query: 246 NTWHA 250 + W Sbjct: 178 HPWFD 182 >gi|304391851|ref|ZP_07373793.1| uracil-DNA glycosylase [Ahrensia sp. R2A130] gi|303296080|gb|EFL90438.1| uracil-DNA glycosylase [Ahrensia sp. R2A130] Length = 205 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 26/189 (13%), Positives = 54/189 (28%), Gaps = 17/189 (8%) Query: 74 ACSLHELKSLLRSFHDCHLCSTSLSTICATQTE------GQDLMIIGYTPSDSDNISGKP 127 L L++ + + C + + + L I G P + SG P Sbjct: 2 PEDLSALQTGIDACRIC-IERPAKLPLPHEPRPVAWLSSSARLCIAGQAPGLRVHKSGLP 60 Query: 128 FSGKTGNMLDKMLQSIE---IMRTQIHISMISPWHPPGNRNL---SNIEMEICRPIIMRQ 181 F +GN L + + R ++ I + P + Sbjct: 61 FDDASGNRLREWMGIDCDQFYDREKLAIVPMGFCFPGYDAKGSDLPPRRECRAVWHDDVF 120 Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK-WSNLCTPHSIIPTLATVHPQELIQY 240 + ++++ IG + + + + + W + L HP + Sbjct: 121 AAMPQIELIIVIGQYAQKYHLGSRMARNMTETARDWRTHLHSNEHRVVLPIPHPSW--RN 178 Query: 241 PLI-KKNTW 248 K+N W Sbjct: 179 TAWLKRNPW 187 >gi|83716775|ref|YP_438581.1| uracil DNA glycosylase superfamily protein [Burkholderia thailandensis E264] gi|257141640|ref|ZP_05589902.1| uracil DNA glycosylase superfamily protein [Burkholderia thailandensis E264] gi|83650600|gb|ABC34664.1| Uracil DNA glycosylase superfamily superfamily [Burkholderia thailandensis E264] Length = 224 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 37/221 (16%), Positives = 73/221 (33%), Gaps = 21/221 (9%) Query: 53 ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDL 110 + R+ SP+ + L L +R+ C HL + A + Sbjct: 1 MPPKRNAPSPIRNGERPKPTRPSRLGPLLREIRACTVCAPHLPCGPRPVVRAD--PRARI 58 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLS 167 +I+G P + SG P+ +G L + L + + I + +P + Sbjct: 59 LIVGQAPGARVHASGIPWDDASGKRLREWLNVDDATFYDESLFAIVPMGFCYPGRGASGD 118 Query: 168 NIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHS 224 N C P+ + ++ P ++ L IG + F + + + + W Sbjct: 119 NPPRPECAPLWLDKLLGELPDIRLTLLIGQYAQRRFLGARRKSSLTETVRAWPEY----- 173 Query: 225 IIPTLATVHPQELIQYPLI-KKNTW---HALITLKKALKNL 261 + HP + K++ W L L+ + L Sbjct: 174 GPEFIPLAHPSP--RNQGWLKQHPWFEAEVLPALRGKVAEL 212 >gi|114331401|ref|YP_747623.1| uracil-DNA glycosylase superfamily protein [Nitrosomonas eutropha C91] gi|114308415|gb|ABI59658.1| Uracil-DNA glycosylase superfamily [Nitrosomonas eutropha C91] Length = 216 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 27/207 (13%), Positives = 51/207 (24%), Gaps = 39/207 (18%) Query: 85 RSFHDCHLCSTS------------LSTICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131 + DC + + L+IIG P N +G+PF+G Sbjct: 9 QDCRDCPRLAQHLDQVKTDHPDYHARPVAPFGDTSAKLLIIGLAPGLHGANRTGRPFTGD 68 Query: 132 T-GNMLDKMLQSIE-------------IMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177 G +L + L + I+ PP E+ C Sbjct: 69 YAGILLYQTLHKFGLANRSKSVAVGDALRLINCRITNAVKCLPP-ANKPLPAEIRQCNIF 127 Query: 178 IMRQIELI---SPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231 + ++ + LL +G + G + + + Sbjct: 128 LASELHDFVSNGGQALLALGTVAHQATLTALRLRKTDYPFSHGAVHPVAGRLRLYD---S 184 Query: 232 VHPQELIQYPLIKKNTWHALITLKKAL 258 H K+ T + + Sbjct: 185 YHCS--RYNTQTKRLTEPMFEQIFDRI 209 >gi|84501550|ref|ZP_00999722.1| uracil-DNA glycosylase, putative [Oceanicola batsensis HTCC2597] gi|84390171|gb|EAQ02730.1| uracil-DNA glycosylase, putative [Oceanicola batsensis HTCC2597] Length = 195 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 26/198 (13%), Positives = 60/198 (30%), Gaps = 25/198 (12%) Query: 79 ELKSLLRSFHDCHLCSTSL------STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 +L S + + C + + L+I G P + G+PF ++ Sbjct: 3 DLPSEISACRICADRFAATATRHRPRPVPWF-RPTARLLIAGQAPGLQVHEKGRPFDDRS 61 Query: 133 GNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNL---SNIEMEICRPIIMRQIELIS 186 G+ L L + ++ + ++ P + + L Sbjct: 62 GDRLRDWLGIDRDTFYDLNRVAVVPMAFCFPGYDARGSDLPPPRICAETWHDRVLAALPQ 121 Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KK 245 ++ + IG + + + T + + + HP + K+ Sbjct: 122 LRLRILIGAHAQRWHLGAKGRVTDTVRA-FRDHLPG-----AIPLPHPSW--RNTGWLKR 173 Query: 246 NTW---HALITLKKALKN 260 N W L L++ +K+ Sbjct: 174 NPWFETELLPVLREKVKD 191 >gi|70607485|ref|YP_256355.1| uracil DNA glycosylase [Sulfolobus acidocaldarius DSM 639] gi|68568133|gb|AAY81062.1| uracil DNA glycosylase [Sulfolobus acidocaldarius DSM 639] Length = 172 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 61/173 (35%), Gaps = 24/173 (13%) Query: 111 MIIGYTP-SDSDNISGKPFSGKTGN------MLDKML--------QSIEIMRTQIHISMI 155 MI+G P + N +G+ F+G + + D L + + ++I+ + Sbjct: 1 MIVGLAPAGNGGNRTGRVFTGDESSNNLTKALYDTGLANQPYSVSRDDGLKLNDVYITAV 60 Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN--- 212 PP N+ + + L K+ + +G + N K Y+ Sbjct: 61 VKCVPPENKPTTGEIRNCMSYLEEETRMLTEAKVYVALGKVAWDSLINLFKSKGYELNGD 120 Query: 213 ----LGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 GK L +I+ + + HP + ++ T L + + K+L Sbjct: 121 RKFSHGKIVKLVKDGNIVYLIGSYHPSP--RNVRTRRLTIEMLEEIFETAKSL 171 >gi|170740795|ref|YP_001769450.1| uracil-DNA glycosylase superfamily protein [Methylobacterium sp. 4-46] gi|168195069|gb|ACA17016.1| uracil-DNA glycosylase superfamily [Methylobacterium sp. 4-46] Length = 204 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 51/188 (27%), Gaps = 19/188 (10%) Query: 76 SLHELKSLLRSFHDC--------HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127 E+ + LR+ C L + + L I P SG+P Sbjct: 3 EFDEVAAALRACRLCRDAPRHGGPLPVEPRPIV--QGSATARLCIASQAPGHRAFRSGRP 60 Query: 128 FSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNL---SNIEMEICRPIIMRQ 181 F +G L L ++ +I I + P + Sbjct: 61 FQDPSGRRLRAWLGLDEATFYDPARIAILPMGACFPGHDAAGGDLPPRRECAETWRARLL 120 Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241 L + ++L IG + + + +W L L HP + Sbjct: 121 AGLPALDLVLVIGQYAQAWHLGRAPGGLTGTVARWRELFAEPRRPRVLPLPHPSW--RNS 178 Query: 242 LI-KKNTW 248 K++ W Sbjct: 179 GWLKRHPW 186 >gi|254286260|ref|ZP_04961219.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|150423675|gb|EDN15617.1| conserved hypothetical protein [Vibrio cholerae AM-19226] Length = 190 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 59/166 (35%), Gaps = 14/166 (8%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + +R C L + + + ++IIG P + + P++ +G Sbjct: 2 LESLLTEIRQCTVCEPHLPLGA-NPVI-RAHPSAKILIIGQAPGTKVHNTSIPWNDASGE 59 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189 L + L + I I + +P R+ + C P+ ++ P ++ Sbjct: 60 RLRQWLGLDRETFYCEENIAIMPMGLCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQL 119 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 L IG ++++ ++ + + +W L HP Sbjct: 120 TLLIGQYAQHYYLSDKPSTLTETVQQWQRWAPS-----VLPLPHPS 160 >gi|313885039|ref|ZP_07818791.1| uracil-DNA glycosylase, family 4 [Eremococcus coleocola ACS-139-V-Col8] gi|312619730|gb|EFR31167.1| uracil-DNA glycosylase, family 4 [Eremococcus coleocola ACS-139-V-Col8] Length = 193 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 53/167 (31%), Gaps = 16/167 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML--QSIEIMRTQIHISMISPWHPPG 162 L+IIG P S PF K+G L + L ++ I + ++P Sbjct: 31 NPEAKLLIIGQAPGSHVEKSLIPFDDKSGVTLMEWLGIGPESFYSQEVAIMPMDFYYPGK 90 Query: 163 NR--NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNL 219 + +L + + ++ L IG F+ +K Q + + Sbjct: 91 GKSGDLPPRKFIAHDYHQSILALMPKIQMTLLIGAYANKFYLGKAFKKNLTQTIASYQEY 150 Query: 220 CTPHSIIPTLATVHPQEL-----IQYPLIKKNTWHALI-TLKKALKN 260 + VHP L + P KK+ L + + L Sbjct: 151 LPDY-----FPLVHPSPLNFRWQAKNPWFKKDVLPDLKIKVAQILGE 192 >gi|254441643|ref|ZP_05055136.1| hypothetical protein OA307_1058 [Octadecabacter antarcticus 307] gi|198251721|gb|EDY76036.1| hypothetical protein OA307_1058 [Octadecabacter antarcticus 307] Length = 194 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 28/197 (14%), Positives = 58/197 (29%), Gaps = 23/197 (11%) Query: 80 LKSLLRSFHDCHLCSTSLSTICA-----TQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L + C + T + L++ G P SG+PF+ +G+ Sbjct: 3 LHLQISGCTLCADRFAATHTAHSPRPIVWFEPTTRLLVAGQAPGMKAYKSGRPFTDPSGD 62 Query: 135 MLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEICRPIIMRQIELISPK 188 L L + ++++ I ++ + +L ++ +L + Sbjct: 63 RLRDWLGLDDTTFYDQSRVAIVPMAFCFLGYDAKGSDLPPPKICGQTWHDRVMADLPDVR 122 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247 + + +G + T T HP + KKN Sbjct: 123 LRVLVGASAHRYHLGVKTGVTETV------SDCRMHAPDTFVLPHPSW--RNTEWLKKNP 174 Query: 248 W---HALITLKKALKNL 261 W L L+ +K + Sbjct: 175 WFGEEVLPALRARVKEV 191 >gi|206563539|ref|YP_002234302.1| uracil DNA glycosylase superfamily protein [Burkholderia cenocepacia J2315] gi|198039579|emb|CAR55547.1| uracil DNA glycosylase superfamily protein [Burkholderia cenocepacia J2315] Length = 199 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 32/199 (16%), Positives = 62/199 (31%), Gaps = 25/199 (12%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + +R+ C L + A ++I+G P + SG P+ +G Sbjct: 9 LDVLLTEIRACRACEADLPLGPRPVVRA--HRDARILIVGQAPGARVHASGIPWDDASGK 66 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIELISP 187 L L T+ I + +P G+ + ++ ++ I Sbjct: 67 RLRDWLGVDAETFYDETRFAIVPMGFCYPGRGASGDNPPRPECAPLWIDRLLAELPSI-- 124 Query: 188 KILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KK 245 ++ L IG + F + W + L HP + K Sbjct: 125 RLTLLIGQYAQRHFLRGARKATLTDTVQAWRDY-----GPAVLPLPHPSP--RNQAWFKH 177 Query: 246 NTWHA---LITLKKALKNL 261 + W + L++ + L Sbjct: 178 HPWFDAEVVPELRRRIAPL 196 >gi|197105348|ref|YP_002130725.1| uracil-DNA glycosylase [Phenylobacterium zucineum HLK1] gi|196478768|gb|ACG78296.1| uracil-DNA glycosylase [Phenylobacterium zucineum HLK1] Length = 220 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 50/148 (33%), Gaps = 16/148 (10%) Query: 101 CATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEIMR----------- 147 + L+++G P + N +G+PF+G G +L + L R Sbjct: 43 PSFGDPDARLLVVGLAPGRTGANRTGRPFTGDFAGWLLYETLLKTGFARGTYEARPDDGL 102 Query: 148 --TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 T I+ PPGN+ ++ E + R L ++++ +G+ ++ Sbjct: 103 TLTDCMITNAVRCAPPGNKPETSEEANCRPFLTARLASLPRLRVIVTLGDVSRRNVLRAL 162 Query: 206 AQKTYQNLGKWSNLCTPHSIIPTLATVH 233 K + L + H Sbjct: 163 GLKASAGI-PGHGSEFQAGPYTVLNSYH 189 >gi|146341384|ref|YP_001206432.1| putative uracil-DNA glycosylase [Bradyrhizobium sp. ORS278] gi|146194190|emb|CAL78211.1| putative uracil-DNA glycosylase [Bradyrhizobium sp. ORS278] Length = 211 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 49/179 (27%), Gaps = 37/179 (20%) Query: 88 HDCHLC------STSLS---------TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131 DC LC T+ + + L+I+G P N +G+PF+G Sbjct: 9 RDCPLCPRLVDFRTAQRAREPSWFNAPVPSFGDANARLLIVGLAPGLQGANRTGRPFTGD 68 Query: 132 T-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177 G +L L IS PP N+ L + + Sbjct: 69 YAGELLYGTLLQYGFAKGRFDARPDDGLTLIDCRISNAVRCVPPQNKPLPAEINQCRSFL 128 Query: 178 IMRQIELISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 + + ++ +G + + A + G I + H Sbjct: 129 AASIAAMPRLRSIVALGRISHDTLLKLLGLRAAAAPFSHGAVHQA----GGIRLYDSYH 183 >gi|78062188|ref|YP_372096.1| uracil-DNA glycosylase superfamily protein [Burkholderia sp. 383] gi|77970073|gb|ABB11452.1| Uracil-DNA glycosylase superfamily [Burkholderia sp. 383] Length = 199 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 57/185 (30%), Gaps = 22/185 (11%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + +R+ C L + A ++I+G P + SG P+ +G Sbjct: 9 LDVLLTEIRACRACEADLPLGPRPVVRA--HRDARILIVGQAPGARVHASGIPWDDASGK 66 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIELISP 187 L L T+ I + +P G+ + ++ ++ I Sbjct: 67 RLRGWLDVDADTFYDETRFAIVPMGFCYPGRGASGDNPPRPECAPLWIDRLLAELPSI-- 124 Query: 188 KILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KK 245 ++ L IG + F + + W + L HP + K Sbjct: 125 RLTLLIGQYAQRHFLRDTRKATLTDTVHAWRDY-----GPDVLPLPHPSP--RNQAWFKH 177 Query: 246 NTWHA 250 + W Sbjct: 178 HPWFD 182 >gi|120613204|ref|YP_972882.1| phage SPO1 DNA polymerase-like protein [Acidovorax citrulli AAC00-1] gi|120591668|gb|ABM35108.1| phage SPO1 DNA polymerase-related protein [Acidovorax citrulli AAC00-1] Length = 266 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 50/151 (33%), Gaps = 13/151 (8%) Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI 169 +++G +PS G P SG TG +LD ML+++ + R PG Sbjct: 122 WLVVGESPSP-----GAPLSGDTGKLLDNMLRAMRLHRHPRAHFSAVERAAPGAAEGEED 176 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 + I + P ++L +G + + L P + Sbjct: 177 TAGS----LQAAIATLRPAMVLVLGLPAARAVLGSREPL-GRLRATAHQLP---DGTPAV 228 Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260 T P L++ P K W L ++ Sbjct: 229 VTYDPAYLLRAPEAKAAAWADLCRALARVRA 259 >gi|254468100|ref|ZP_05081506.1| uracil-DNA glycosylase superfamily protein [beta proteobacterium KB13] gi|207086910|gb|EDZ64193.1| uracil-DNA glycosylase superfamily protein [beta proteobacterium KB13] Length = 209 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 28/213 (13%), Positives = 60/213 (28%), Gaps = 47/213 (22%) Query: 86 SFHDCHL------CSTSLST------ICATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT 132 + C + + + +I+G P N +G+PF+G Sbjct: 6 NCKKCPRLVNFLDKVSQSNPDYHCRPVAPFGDMNPQFLIVGLAPGMRGANKTGRPFTGDY 65 Query: 133 -GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPII 178 G +L + L + I+ PP N + E++ C + Sbjct: 66 AGILLYETLSKFGFSSSPESISVKDGLQLFGVRITNAVKCLPPEN-KPTTSEIKQCNNYL 124 Query: 179 MRQIELISPKILLF-IGNKTKNFFFNNDAQKTYQ------NLGKWSNLCTPHSIIPTLAT 231 +I+ I K+++ +G + S+ + + Sbjct: 125 ATEIKEIKNKLIILALGKIAHEAVLTSQQLTKNHFKFSHGARHIISDQQILYD------S 178 Query: 232 VHPQELIQYPLIKKNT----WHALITLKKALKN 260 H K+ T + +K ++N Sbjct: 179 YHCS--RYNTQTKRLTQSMFEEVFLKIKTEMEN 209 >gi|299067384|emb|CBJ38583.1| uracil-dna glycosylase protein [Ralstonia solanacearum CMR15] Length = 205 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 28/188 (14%), Positives = 60/188 (31%), Gaps = 16/188 (8%) Query: 78 HELKSLLRSFHDCHLCSTS-----LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 S L C LC + + A ++I+G P + +G P++ ++ Sbjct: 11 AAFASCLHDIRACRLCEGALPHEPRPVVLAD--RRARVLIVGQAPGRIVHETGIPWNDRS 68 Query: 133 GNMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP-- 187 G+ L + L+ +I + + P N +C P R + P Sbjct: 69 GDRLRQWLRIGYDDFYADRRIAVVPMGFCFPGTGPNGDLPPRPVCAPQWHRPLLTAMPDL 128 Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKN 246 ++ L +G + ++ + + ++ + HP + K N Sbjct: 129 RLALLVGGYAQRYYLDMPRGMSLTDVVR-HGPVRDAEGRVLFPLPHPSP--RNLAWFKHN 185 Query: 247 TWHALITL 254 W + Sbjct: 186 PWFDAQIV 193 >gi|296131064|ref|YP_003638314.1| Uracil-DNA glycosylase superfamily [Cellulomonas flavigena DSM 20109] gi|296022879|gb|ADG76115.1| Uracil-DNA glycosylase superfamily [Cellulomonas flavigena DSM 20109] Length = 281 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 24/191 (12%), Positives = 56/191 (29%), Gaps = 42/191 (21%) Query: 84 LRSFHDCHL---CSTSL---------------STICATQTEGQDLMIIGYTPSDS-DNIS 124 + + C + + E + ++G P+ N + Sbjct: 54 VTTCRACPRLVAWRRATAADPPARYRGQTYWARPVPGFGDEHAGIALVGLAPAADGGNRT 113 Query: 125 GKPFSG-KTGNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGNRNLSNIE 170 G+ F+G ++G+ L L ++ T + ++ P + E Sbjct: 114 GRMFTGDRSGDFLVAALHRAGLASQPTSEDRDDGLVLTGVRMTAPVRC-APPANAPTPAE 172 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFF--------NNDAQKTYQNLGKWSNLCTP 222 C P + R++ L+ P++++ +G + G L Sbjct: 173 RRTCGPWLARELALVDPRVVVVLGGFGWRALLTTLDEQGWGVPRPRPAFGHGVELTLRRG 232 Query: 223 HSIIPTLATVH 233 + + L H Sbjct: 233 DASLVLLGCFH 243 >gi|149911168|ref|ZP_01899793.1| Uracil-DNA glycosylase [Moritella sp. PE36] gi|149805769|gb|EDM65766.1| Uracil-DNA glycosylase [Moritella sp. PE36] Length = 200 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 33/196 (16%), Positives = 69/196 (35%), Gaps = 18/196 (9%) Query: 80 LKSLLRSFHDCHLCST----SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 L +++ C LC + + ++I G P + SG PF+ +G+ Sbjct: 6 LDTIVSDVRKCTLCEPDLPLGARPVL-QADKKAKILIAGQAPGIRVHKSGIPFTDPSGDR 64 Query: 136 LDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KIL 190 L + + + T+I I + +P ++ C +I P +++ Sbjct: 65 LRQWMGIDKDTFYDATKIAILPMGFCYPGTGKSGDLPPRPECAKTWRAEILAAMPNIELI 124 Query: 191 LFIGNKTKNFFFNN-DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248 L IG + + + + + + W + + L HP + + KKN W Sbjct: 125 LVIGIYAQKWHMGDVKQKNLTETVKNWRDYWQKNWPER-LPLPHPSP--RNNIWLKKNPW 181 Query: 249 HALITL---KKALKNL 261 L + + + L Sbjct: 182 FELDVIPHLQARVAQL 197 >gi|222823566|ref|YP_002575140.1| hypothetical protein Cla_0555 [Campylobacter lari RM2100] gi|222538788|gb|ACM63889.1| conserved hypothetical protein [Campylobacter lari RM2100] Length = 203 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 68/184 (36%), Gaps = 10/184 (5%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN- 134 S EL +++ + CH ++ + + ++I +N SGK F+ K Sbjct: 29 SFKELNERVKTCNLCHFSKLRKYSLIEKEAKNAKILIYQAFVDKEENESGKFFASKNKQE 88 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 L + + + +I+ S + N + + +++C P +++ I KI+L +G Sbjct: 89 FLRLCKELLNLKEDEIYFSYMFKC--FSNFKIDDQALKLCLPYFYNELDFIKAKIILCLG 146 Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254 + ++N K+ C + L + L + P + + Sbjct: 147 QEAFASL-------GFENFQKYKGQCMRFNNALLLPSYDLNFLSKNPSFYTEFMEDIKKI 199 Query: 255 KKAL 258 K L Sbjct: 200 KGYL 203 >gi|283856519|ref|YP_163383.2| Uracil-DNA glycosylase superfamily protein [Zymomonas mobilis subsp. mobilis ZM4] gi|283775524|gb|AAV90272.2| Uracil-DNA glycosylase superfamily [Zymomonas mobilis subsp. mobilis ZM4] Length = 212 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 24/203 (11%), Positives = 50/203 (24%), Gaps = 29/203 (14%) Query: 85 RSFHDCHLCSTSLS------------TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131 R C ++ + + L I+G P N +G+PF+G Sbjct: 4 RDCPLCPRLASLRHDLQKEHPDWFNAPVPPFGDDDPWLAIVGLAPGMKGANRTGRPFTGD 63 Query: 132 T-GNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSNIEMEICRPI 177 G +L + L + + PP N+ + + Sbjct: 64 FAGILLYETLLKYGLATGHYQADINDGLKLKGTVVLNSVRCLPPQNKPTTQEMVTCRPFF 123 Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237 + K++L +G+ K I + + H Sbjct: 124 LGAMAHYPHLKVILALGHIAHQTILRAFGITLSSMPFKHGAAYQLSPEIQLVDSYHCS-- 181 Query: 238 IQYPLIKKNTWHALITLKKALKN 260 ++ T + + Sbjct: 182 RYNQNTRRLTEDMFEDVFAKIIE 204 >gi|262200459|ref|YP_003271667.1| uracil-DNA glycosylase superfamily [Gordonia bronchialis DSM 43247] gi|262083806|gb|ACY19774.1| Uracil-DNA glycosylase superfamily [Gordonia bronchialis DSM 43247] Length = 251 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 28/202 (13%), Positives = 58/202 (28%), Gaps = 44/202 (21%) Query: 75 CSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLMIIGYT 116 S+ L L C + ++IIG Sbjct: 12 RSIAALDRDLVGCRACPRLVAWREQVGREKRRAFADQEYWARPVPGFGPSDAAVVIIGLA 71 Query: 117 PSDS-DNISGKPFSGK-TGNMLDKMLQS-------------IEIMRTQIHISMISPWHPP 161 P+ N +G+ F+G +G++L L + ++ ++ PP Sbjct: 72 PAAHGGNRTGRMFTGDQSGDVLFAALHAAGLANQATSVSADDGLLLYGTRVTAPVHCAPP 131 Query: 162 GNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDA--------QKTYQ 211 N + E + C + ++EL++P + ++ +G + + Sbjct: 132 QN-KPTPQERDECAHWLHSELELLAPTMRSVVALGAFGWRQTLHTFGTLGWSVPRPRPAF 190 Query: 212 NLGKWSNLCTPHSIIPTLATVH 233 G + L I H Sbjct: 191 GHGAHTVLTRGDRSIGVFGCYH 212 >gi|118587969|ref|ZP_01545379.1| hypothetical protein SIAM614_10348 [Stappia aggregata IAM 12614] gi|118439591|gb|EAV46222.1| hypothetical protein SIAM614_10348 [Stappia aggregata IAM 12614] Length = 219 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 26/180 (14%), Positives = 52/180 (28%), Gaps = 22/180 (12%) Query: 99 TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEIMRTQI------ 150 + + L+IIG P N +G+PF+G G++L + + Sbjct: 41 PVPSFGDASPRLLIIGLAPGMKGANCTGRPFTGDYAGDLLYQTMIEFGFAEGTYLARPDD 100 Query: 151 -------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF-- 201 I+ PP N+ ++ S K +L +G F Sbjct: 101 GLRLKDAMITNAVRCLPPQNKPTGAEIKTCRPYLLSTLDANPSIKAVLALGRIAHETFLT 160 Query: 202 -FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 + G L P + + + H + T ++ + ++ Sbjct: 161 ALDQRRASFAFAHGAQHEL--PGTGLTLFDSYHCS--RYNTNTGRLTEEMFHSVFRQIRA 216 >gi|120554746|ref|YP_959097.1| uracil-DNA glycosylase superfamily protein [Marinobacter aquaeolei VT8] gi|120324595|gb|ABM18910.1| Uracil-DNA glycosylase superfamily [Marinobacter aquaeolei VT8] Length = 198 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 60/182 (32%), Gaps = 15/182 (8%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 S EL +R+ C +E ++++G P + +G PF+ +G+ Sbjct: 9 SFDELVRRVRACQICAGDLPHEPRPVIQLSESSRILVVGQAPGRRVHETGLPFNDPSGDR 68 Query: 136 LDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KIL 190 L + + + ++ I + +P ++ C P + + P ++ Sbjct: 69 LRQWMGITRDTFYDEQKLAILPMGFCYPGTGKSGDLPPRPECAPAWRQALLDRLPEIRLT 128 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKK 245 L IG + + +N+ +W + HP L + P + Sbjct: 129 LLIGQYAHAWHIPGARRAVTENVRQWQQFWPD-----VIPMPHPSPRNNLWLRKNPWFEA 183 Query: 246 NT 247 Sbjct: 184 EV 185 >gi|319764801|ref|YP_004128738.1| phage spo1 DNA polymerase-related protein [Alicycliphilus denitrificans BC] gi|317119362|gb|ADV01851.1| phage SPO1 DNA polymerase-related protein [Alicycliphilus denitrificans BC] Length = 196 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 45/131 (34%), Gaps = 15/131 (11%) Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI 169 +++ +P+ + P +G+ G +LD ML+++ + R Sbjct: 55 WLVVLESPTPGE-----PLAGEVGRLLDNMLRAMGLHRHPRTFVATL----GRPAPGLPA 105 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP-HSIIPT 228 E + + + + P ++L +G + + LG+ P Sbjct: 106 EGVEPAAGLQQALATLRPAMVLVLGLAAARAVLGSR-----EPLGRLRAATHRLADGTPA 160 Query: 229 LATVHPQELIQ 239 + + P L++ Sbjct: 161 VVSYDPAYLLR 171 >gi|297581732|ref|ZP_06943654.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297534139|gb|EFH72978.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 190 Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 71/196 (36%), Gaps = 20/196 (10%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + +R C L + + + ++IIG P + + P++ +G Sbjct: 2 LESLLTEIRQCTVCEPHLPLGA-NPVI-RAHPAAKILIIGQAPGTKVHNTSIPWNDASGE 59 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189 L + L + I I + +P R+ + C P+ ++ P ++ Sbjct: 60 RLRQWLGLDREAFYCEENIAIMPMGLCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQL 119 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKN--- 246 L IG ++++ ++ + +W + L HP + L +N Sbjct: 120 TLLIGQYAQHYYLSDKPSTLTDTVQQWQSWAPS-----VLPLPHPSP--RNTLWLRNHPW 172 Query: 247 TWHALIT-LKKALKNL 261 ++ L++ +K + Sbjct: 173 FEQDILPYLRQRVKQV 188 >gi|209520099|ref|ZP_03268874.1| Uracil-DNA glycosylase superfamily [Burkholderia sp. H160] gi|209499472|gb|EDZ99552.1| Uracil-DNA glycosylase superfamily [Burkholderia sp. H160] Length = 208 Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 67/198 (33%), Gaps = 19/198 (9%) Query: 75 CSLHELKSLLRSFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 S L +RS C + + A + G ++I+G P + SG P+S +G Sbjct: 13 ASFDALLHDIRSCTLCAPNLPHAPRPVLAA-SVGARILIVGQAPGARVHASGVPWSDASG 71 Query: 134 NMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQI--ELISPK 188 L L ++ I + P + C R++ L S K Sbjct: 72 ARLRTWLGVDDWTFYDDSKFAIVPMGFCFPGRGASGDLPPRPECASRWHRELLAHLRSVK 131 Query: 189 ILLFIGNKTKNFFFNN-DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKN 246 + L IG + F + + L +W+ L HP + K+N Sbjct: 132 LTLLIGQYAQRFGLGDAFGPTSTDTLVRWAEFEPH-----VLPLPHPSP--RNIAWFKRN 184 Query: 247 TW---HALITLKKALKNL 261 W L TL++ + + Sbjct: 185 PWFEGEVLPTLRERVAAV 202 >gi|224825202|ref|ZP_03698308.1| Uracil-DNA glycosylase superfamily [Lutiella nitroferrum 2002] gi|224602873|gb|EEG09050.1| Uracil-DNA glycosylase superfamily [Lutiella nitroferrum 2002] Length = 196 Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 60/167 (35%), Gaps = 15/167 (8%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + +R+ C L + A ++++G P + +G PF+ +G+ Sbjct: 6 LDTLLAEIRACRHCEVQLPLGPRPVVQA--AATARILLVGQAPGVRVHQTGLPFNDPSGD 63 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189 L + L + ++ I + +P + + C + +++ P ++ Sbjct: 64 RLRRWLDLDRDTFYDPARLAIVPMGFCYPGKHGSGDAPPRPECAALWRQRLLAQLPDIRL 123 Query: 190 LLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQ 235 L IG + + +KT + W ++P HP Sbjct: 124 TLLIGQYAQAWHLGKRRKKTLTDTVKAWREYQPAFFVLP-----HPS 165 >gi|153830395|ref|ZP_01983062.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|148874129|gb|EDL72264.1| conserved hypothetical protein [Vibrio cholerae 623-39] Length = 190 Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 59/166 (35%), Gaps = 14/166 (8%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + +R C L + + + ++IIG P + + P++ +G Sbjct: 2 LESLLTEIRQCTVCEPYLPLGA-NPVI-RAHPAAKILIIGQAPGTKVHNTSIPWNDASGE 59 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189 L + L + I I + +P R+ + C P+ ++ P ++ Sbjct: 60 RLRQWLGLDREAFYCEENIAIMPMGLCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQL 119 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 L IG ++++ ++ + + +W L HP Sbjct: 120 TLLIGQYAQHYYLSDKPNTLTETVQQWQRWAPS-----VLPLPHPS 160 >gi|54024325|ref|YP_118567.1| hypothetical protein nfa23560 [Nocardia farcinica IFM 10152] gi|54015833|dbj|BAD57203.1| hypothetical protein [Nocardia farcinica IFM 10152] Length = 268 Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 23/185 (12%), Positives = 60/185 (32%), Gaps = 36/185 (19%) Query: 53 ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL--------------- 97 + + A + S+ +L + + + C Sbjct: 1 MPSGTRPPPVPRAGAAPARARYRSIADLDADIAACRACPRLVRWRELVAETKRAAFRDET 60 Query: 98 ---STICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQSIEIMRTQI-- 150 + + L+++G P+ N +G+ F+G ++G++L L ++ + Sbjct: 61 YWGRPVPGFGPDDARLLLVGLAPAAHGGNRTGRMFTGDRSGDVLFAALHAVGLANQPTAV 120 Query: 151 -----------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKT 197 ++ PP N + E + CR + ++ L++P + ++ +G Sbjct: 121 HPGDGLRLLGARVTAPVHCAPPDN-KPTVTERDRCRGWLDVELGLLAPTVRAIVVLGGFG 179 Query: 198 KNFFF 202 Sbjct: 180 WQALL 184 >gi|127513287|ref|YP_001094484.1| uracil-DNA glycosylase superfamily protein [Shewanella loihica PV-4] gi|126638582|gb|ABO24225.1| Uracil-DNA glycosylase superfamily [Shewanella loihica PV-4] Length = 196 Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 51/177 (28%), Gaps = 15/177 (8%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 +L +L + C + ++I+G P SG PF +G+ Sbjct: 2 ETLDQLLERIACCQICQPHLSHKVRPVLQAASSAKVLIVGQAPGTKAAASGLPFDDPSGD 61 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR--QIELISPKI 189 L L + + I + +P R+ C P L + ++ Sbjct: 62 RLRDWLGVSREQFYDSSLFAIVPMGFCYPGKGRSGDLPPRGECAPAWREPLLAHLKNIQL 121 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYP 241 L IG + + F + + W + HP L + P Sbjct: 122 TLVIGQYAQAYHFGKQCGGVTECVQGWQQ-----HGSHIMPLPHPSPRNNLWLRRNP 173 >gi|262277970|ref|ZP_06055763.1| uracil-DNA glycosylase superfamily protein [alpha proteobacterium HIMB114] gi|262225073|gb|EEY75532.1| uracil-DNA glycosylase superfamily protein [alpha proteobacterium HIMB114] Length = 223 Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 22/200 (11%), Positives = 53/200 (26%), Gaps = 39/200 (19%) Query: 82 SLLRSFHDCHL---------CSTSL---------STICATQTEGQDLMIIGYTPSDSD-N 122 + C + G L++IG P+ Sbjct: 10 RKVHKCKKCPRLVQFRNKISSEKRKSYQDQTYWNKPVTGFGDLGAKLILIGLAPAAHGAT 69 Query: 123 ISGKPFSGKTG-NMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSN 168 +G+ F+G + L + L + I++ PP + Sbjct: 70 RTGRVFTGDKSADFLFQCLFKSGLSNQPNSDHVKDGLKLKNTFITLALRCVPPQD-KPKP 128 Query: 169 IEMEICRPIIMRQIELISPKI-LLFIGNKTKNFFFNNDAQKT--YQNLGKWSNLCTPHSI 225 IE++ C ++ ++ K ++ +G + + + Sbjct: 129 IELKNCSSFFKEELNMLKNKKVIIALGKIAFDACIRFYKENYNISGPFKFAHGAKYKIND 188 Query: 226 IPTLATVHPQELIQYPLIKK 245 + ++ HP + K+ Sbjct: 189 VYLVSCYHPSP--RNVNTKR 206 >gi|307637340|gb|ADN79790.1| hypothetical protein hp908_0663 [Helicobacter pylori 908] gi|325995932|gb|ADZ51337.1| hypothetical protein hp2018_0641 [Helicobacter pylori 2018] gi|325997526|gb|ADZ49734.1| hypothetical protein hp2017_0640 [Helicobacter pylori 2017] Length = 209 Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 61/184 (33%), Gaps = 13/184 (7%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 ++ + + + C S + L I TP + + ML+ Sbjct: 37 KQVHEGIENCNLCKRHQHSK-PVIGLFNPTSKLAFITLTP--MLDSQLHFLNNLKALMLE 93 Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++Q +I + N E+ C P + Q++ + K+++ G Sbjct: 94 SIIQKVFNYPLKDCNILSLLKC--DSNSLNLEEEINACLPHLTWQLDNSASKVIVVFGEI 151 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 N ++ G+ +L T H L+T +++++ P +KK + Sbjct: 152 LPKRLLNLSK---EESFGRIVSLKTKH----FLSTYALEDMLKNPTLKKEALAHFKIALQ 204 Query: 257 ALKN 260 L Sbjct: 205 FLNQ 208 >gi|284989504|ref|YP_003408058.1| Uracil-DNA glycosylase superfamily [Geodermatophilus obscurus DSM 43160] gi|284062749|gb|ADB73687.1| Uracil-DNA glycosylase superfamily [Geodermatophilus obscurus DSM 43160] Length = 261 Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 26/217 (11%), Positives = 59/217 (27%), Gaps = 43/217 (19%) Query: 59 IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL------------------STI 100 + A+ L L + + C + Sbjct: 9 PVTRSPAGVVRSARSTRDLAVLDARISGCRACPRLVAWREEVACVKRASFRHEEYWGRPV 68 Query: 101 CATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQS-------------IEI 145 + ++G P+ N +G+ F+G ++G+ + L + Sbjct: 69 PGLGPADARIAVVGLAPAAHGGNRTGRVFTGDRSGDWIFAALWRAGLANQPTSTHIGDGL 128 Query: 146 MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE-LISPKILLFIGNKTKNFF--- 201 T + ++ PP + E + C P + R++ L ++ + +G Sbjct: 129 QLTDVRVAAAVRCAPP-ANAPTPEERDTCSPWLARELALLPRLRVAVVLGGFGWTALWPV 187 Query: 202 FNNDAQKTYQNL-----GKWSNLCTPHSIIPTLATVH 233 + G +L P + L + H Sbjct: 188 LAGAGYPLPRPRPAFGHGVEVSLEGPRGPLTLLGSYH 224 >gi|121611374|ref|YP_999181.1| hypothetical protein Veis_4462 [Verminephrobacter eiseniae EF01-2] gi|121556014|gb|ABM60163.1| hypothetical protein Veis_4462 [Verminephrobacter eiseniae EF01-2] Length = 167 Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 26/75 (34%), Gaps = 5/75 (6%) Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK 245 P ++L +G+ + LG+ + P + + P L++ P K Sbjct: 93 QPALVLVLGHVAARAALG-----CTEPLGRLRAGPHQLAACPAVVSYDPAFLLRSPDTKA 147 Query: 246 NTWHALITLKKALKN 260 W L ++N Sbjct: 148 AAWADLCRALAMVRN 162 >gi|89094466|ref|ZP_01167405.1| hypothetical protein MED92_08901 [Oceanospirillum sp. MED92] gi|89081202|gb|EAR60435.1| hypothetical protein MED92_08901 [Oceanospirillum sp. MED92] Length = 194 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 60/193 (31%), Gaps = 15/193 (7%) Query: 80 LKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 L +R+ C L + + A L+IIG P + SG P++ +GN L Sbjct: 4 LLEQIRACKLCEPDLALGANPVVQA--APSAKLLIIGQAPGIKVHQSGIPWNDPSGNRLR 61 Query: 138 KML---QSIEIMRTQIHISMISPWHP-PGNRNLSNIEMEICRPIIMRQIEL-ISPKILLF 192 + L I I + +P G E + ++ + +++L Sbjct: 62 EWLQIDHERFYDPQHIAIMPMGFCYPGKGKSGDLPPRPECAEKWHQKLLDELPNIELILL 121 Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW--- 248 IG + ++ P HP + +KN W Sbjct: 122 IGQYAQKYYLKGSEWGERHQNLTDRVKHANSCPSPYFVLPHPSP--RNRHWMQKNAWFES 179 Query: 249 HALITLKKALKNL 261 L L+ L L Sbjct: 180 ETLPLLRAQLNKL 192 >gi|332991658|gb|AEF01713.1| uracil-DNA glycosylase [Alteromonas sp. SN2] Length = 192 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 53/165 (32%), Gaps = 16/165 (9%) Query: 77 LHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 +L + C HL ++ I + + +++IG P + + K FS K+G Sbjct: 8 FEDLVKEAKQCSLCVEHL-PYGVNPIFSIGS-KAKVVLIGQAPGLIAHQNTKAFSDKSGE 65 Query: 135 MLDKMLQSI---EIMRTQIHISMISPWHP-PGNRNLSNIEMEICRPIIMRQIELISPKIL 190 L + L ++ I + P N + E + + I P+++ Sbjct: 66 RLRQWLHIDTTTFYDENKLAIMPMGFCFPGYKNGADAPPRKECAPTWHEKMLHAIQPELV 125 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 L +G + ++ T L HP Sbjct: 126 LLVGRYAQQYYLPKYRTLTDAIK------NNCDEKFAVLP--HPS 162 >gi|295425191|ref|ZP_06817894.1| possible uracil-DNA glycosylase [Lactobacillus amylolyticus DSM 11664] gi|295064967|gb|EFG55872.1| possible uracil-DNA glycosylase [Lactobacillus amylolyticus DSM 11664] Length = 153 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 44/123 (35%), Gaps = 18/123 (14%) Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------- 162 MI+G P + S PF G + L K + SI + R ++I+ P Sbjct: 1 MIVGEAPGHEELASQIPFHGDSRKELMKSIASIGLKREDVYITSAVRSRPYAVKKVFSKR 60 Query: 163 ---------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL 213 NR + E+ P +I+ I P +++ +GN + + Sbjct: 61 ENKEVVKYPNRKPTKKEVLAHAPFSDYEIKEIEPTLIVAVGNTALERLLGP-GHRISEEH 119 Query: 214 GKW 216 GK Sbjct: 120 GKI 122 >gi|154253304|ref|YP_001414128.1| uracil-DNA glycosylase superfamily protein [Parvibaculum lavamentivorans DS-1] gi|154157254|gb|ABS64471.1| Uracil-DNA glycosylase superfamily [Parvibaculum lavamentivorans DS-1] Length = 223 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 48/182 (26%), Gaps = 33/182 (18%) Query: 82 SLLRSFHDCHLCSTSLS------------TICATQTEGQDLMIIGYTPSDSD-NISGKPF 128 C + + T L+I+G P N +G+PF Sbjct: 13 EAPLDCPLCPRLVAYRQDNDRAHPDWFNAPVPSFGTGNARLLIVGLAPGVQGANRTGRPF 72 Query: 129 SGKT-GNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSNIEMEIC 174 +G G++L L R I+ PP N+ Sbjct: 73 TGDYAGDLLYATLLEFGFARGTYDARPDDGLELVGAMITNAVRCVPPQNKPTPAEAKTCL 132 Query: 175 RPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN---LGKWSNLCTPHSIIPTLAT 231 R + R L + +L +G + + K G +L + + Sbjct: 133 RFLSARIEALPDLQAVLALGRIAHDAVLSARELKRSSAPFGHGAQHDL---GQGLRLFDS 189 Query: 232 VH 233 H Sbjct: 190 YH 191 >gi|313887865|ref|ZP_07821544.1| uracil-DNA glycosylase family protein [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846031|gb|EFR33413.1| uracil-DNA glycosylase family protein [Peptoniphilus harei ACS-146-V-Sch2b] Length = 190 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 57/167 (34%), Gaps = 19/167 (11%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 ++IIG P + +G F+ K+G L K L E + I P Sbjct: 31 NPKSKILIIGQAPGERVEETGILFNDKSGENLVKWLGISEDVLHSED-FSIIPMDFYYPG 89 Query: 165 NLSNIEMEICRPIIMRQIE------LISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWS 217 + + + R I ++ L K+ + IG + F+ + +K + + + Sbjct: 90 KGKSGD-KAPRTFIAKEYHPLLLNELKDIKLTILIGAYAQKFYLKDKFKKNLTETVKSYK 148 Query: 218 NLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALK 259 + VHP + + P ++ L + K L+ Sbjct: 149 EFLPEY-----FPIVHPSPLNNRWIAKNPFFREEVLPELKKIVKKLR 190 >gi|269796277|ref|YP_003315732.1| uracil-DNA glycosylase [Sanguibacter keddieii DSM 10542] gi|269098462|gb|ACZ22898.1| uracil-DNA glycosylase [Sanguibacter keddieii DSM 10542] Length = 266 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 34/253 (13%), Positives = 71/253 (28%), Gaps = 51/253 (20%) Query: 57 RHIHSPLVQQA-DSIAQKACSLHELKSLLRSFHDCH-LCSTSLST--------------- 99 R A +A A SL E+ L+ C L + Sbjct: 12 RLPRPTWPGDAGPDLAAGARSLLEVDRLVEGCTACPRLVAFREQVSDERRAAFRDQTYWG 71 Query: 100 --ICATQTEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKMLQSIEIMRTQI----- 150 + + E ++++G P+ N +G+ F+G ++G +L + Sbjct: 72 RGVPSLGDEQAGVLVVGLAPAAHGSNRTGRMFTGDRSGEVLYAAMHRTGFASQPTAVSRD 131 Query: 151 --------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS--PKILLFIGNKTKNF 200 + PP N + E C P + R++EL++ ++ + +G Sbjct: 132 DGLVLTGARVVAPVHCVPPDN-KPTPDERRRCSPYLGRELELLAGTVRVAVVLGGFGWVA 190 Query: 201 FFNN--------DAQKTYQNLG-KWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT---W 248 + G + + L H + T Sbjct: 191 LLATLRDQGWSVPRPRPRFGHGVQVRLEHPDGRDLTLLGCFHVSP--HNTSTGRLTPQMV 248 Query: 249 HALITLKKALKNL 261 ++ + L + Sbjct: 249 DDVLLEARRLAEV 261 >gi|15640295|ref|NP_229922.1| hypothetical protein VC0266 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121586366|ref|ZP_01676155.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121727046|ref|ZP_01680237.1| conserved hypothetical protein [Vibrio cholerae V52] gi|147673328|ref|YP_001218522.1| hypothetical protein VC0395_A2644 [Vibrio cholerae O395] gi|153818473|ref|ZP_01971140.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|153821807|ref|ZP_01974474.1| conserved hypothetical protein [Vibrio cholerae B33] gi|227080481|ref|YP_002809032.1| hypothetical protein VCM66_0251 [Vibrio cholerae M66-2] gi|229506937|ref|ZP_04396445.1| uracil-DNA glycosylase [Vibrio cholerae BX 330286] gi|229509308|ref|ZP_04398791.1| uracil-DNA glycosylase [Vibrio cholerae B33] gi|229516254|ref|ZP_04405702.1| uracil-DNA glycosylase [Vibrio cholerae RC9] gi|229606448|ref|YP_002877096.1| uracil-DNA glycosylase [Vibrio cholerae MJ-1236] gi|255744072|ref|ZP_05418026.1| uracil-DNA glycosylase [Vibrio cholera CIRS 101] gi|262161961|ref|ZP_06030978.1| uracil-DNA glycosylase [Vibrio cholerae INDRE 91/1] gi|262168027|ref|ZP_06035726.1| uracil-DNA glycosylase [Vibrio cholerae RC27] gi|298500902|ref|ZP_07010704.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|9654676|gb|AAF93441.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121549486|gb|EAX59514.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121630557|gb|EAX62947.1| conserved hypothetical protein [Vibrio cholerae V52] gi|126510949|gb|EAZ73543.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|126520703|gb|EAZ77926.1| conserved hypothetical protein [Vibrio cholerae B33] gi|146315211|gb|ABQ19750.1| conserved hypothetical protein [Vibrio cholerae O395] gi|227008369|gb|ACP04581.1| conserved hypothetical protein [Vibrio cholerae M66-2] gi|227012109|gb|ACP08319.1| conserved hypothetical protein [Vibrio cholerae O395] gi|229346680|gb|EEO11650.1| uracil-DNA glycosylase [Vibrio cholerae RC9] gi|229353623|gb|EEO18560.1| uracil-DNA glycosylase [Vibrio cholerae B33] gi|229356042|gb|EEO20961.1| uracil-DNA glycosylase [Vibrio cholerae BX 330286] gi|229369103|gb|ACQ59526.1| uracil-DNA glycosylase [Vibrio cholerae MJ-1236] gi|255738337|gb|EET93728.1| uracil-DNA glycosylase [Vibrio cholera CIRS 101] gi|262023560|gb|EEY42262.1| uracil-DNA glycosylase [Vibrio cholerae RC27] gi|262028339|gb|EEY46995.1| uracil-DNA glycosylase [Vibrio cholerae INDRE 91/1] gi|297540406|gb|EFH76465.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 190 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 59/166 (35%), Gaps = 14/166 (8%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + +R C L + + + ++IIG P + + P++ +G Sbjct: 2 LESLLTEIRQCTVCEPHLPLGA-NPVI-RAHPAAKILIIGQAPGTKVHQTSIPWNDASGE 59 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189 L + L + I I + +P R+ + C P+ ++ P ++ Sbjct: 60 RLRQWLGLDREAFYCEENIAIMPMGLCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQL 119 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 L IG ++++ ++ + + +W L HP Sbjct: 120 TLLIGQYAQHYYLSDKPSTLTETVQQWQRWAPS-----VLPLPHPS 160 >gi|159036498|ref|YP_001535751.1| uracil-DNA glycosylase superfamily protein [Salinispora arenicola CNS-205] gi|157915333|gb|ABV96760.1| Uracil-DNA glycosylase superfamily [Salinispora arenicola CNS-205] Length = 230 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 28/200 (14%), Positives = 58/200 (29%), Gaps = 42/200 (21%) Query: 75 CSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLMIIGYT 116 SL L + + C + + I+G Sbjct: 2 PSLAVLDAAIAECFACPRLVGWREEVARTRRAAFREQEYWGRPVPGFGDRTARIAILGLA 61 Query: 117 PSDS-DNISGKPFSG-KTGNMLDKMLQ-------------SIEIMRTQIHISMISPWHPP 161 P+ N +G+ F+G ++G++L L + + + PP Sbjct: 62 PAAHGGNRTGRVFTGDRSGDVLFAALHRAGLANQPTSVAAADGLTLRGTRVLAAVRCAPP 121 Query: 162 GNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNF----FFNNDAQKTYQNLGK 215 GN + E + C P + R++ L+ P ++++ +G Sbjct: 122 GN-KPTPGERDTCAPWLHREVALLRPSLRVVVTLGAFAWTAWWPTLRQVYGVTPPSPRPA 180 Query: 216 W-SNLCTPHSIIP-TLATVH 233 + + +P L H Sbjct: 181 FTHGAHWSGTAVPDLLGCYH 200 >gi|307822709|ref|ZP_07652940.1| Uracil-DNA glycosylase superfamily [Methylobacter tundripaludum SV96] gi|307736313|gb|EFO07159.1| Uracil-DNA glycosylase superfamily [Methylobacter tundripaludum SV96] Length = 213 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 46/194 (23%), Gaps = 29/194 (14%) Query: 85 RSFHDCH-----LCSTSLS-------TICATQTEGQDLMIIGYTPSDSDNI-SGKPFSGK 131 + C LC + L+I+G P +G+PF+G Sbjct: 9 QDCRQCKRLDDFLCEVKQKHPDYHARPVAPFGDSAAQLLIVGLAPGMHGANATGRPFTGD 68 Query: 132 T-GNMLDKMLQSIEIMRT-------------QIHISMISPWHPPGNRNLSNIEMEICRPI 177 G +L + L I+ PP N+ + + + Sbjct: 69 YAGLLLYEALYEFGYSNQIKSESLTDGLALKNCRITNAVKCLPPQNKPTNAEINQCNAYL 128 Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237 L ++L +G K + + + H Sbjct: 129 AAELKTLPEQAVILALGLVAHQAVLKAYGLKQNSAKFAHNVQHALPDGCTLIDSYHTS-- 186 Query: 238 IQYPLIKKNTWHAL 251 K+ T Sbjct: 187 RYNVQTKRLTKEMF 200 >gi|301165886|emb|CBW25459.1| hypothetical protein BMS_0548 [Bacteriovorax marinus SJ] Length = 286 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 3/81 (3%) Query: 181 QIELISPKILLFIGNKTKNFFFNND---AQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237 +I L PK ++ +G NF + ++ Q L + + HP L Sbjct: 203 EIALFKPKAVISLGAVATNFLYGKKEKLSKIHGQELERIIEIGDESINFTLFPIFHPDLL 262 Query: 238 IQYPLIKKNTWHALITLKKAL 258 P +K+ W L + K L Sbjct: 263 EINPSMKRTAWMDLQKVMKFL 283 >gi|218661345|ref|ZP_03517275.1| putative uracil DNA glycosylase protein [Rhizobium etli IE4771] Length = 94 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 12/89 (13%), Positives = 31/89 (34%), Gaps = 10/89 (11%) Query: 176 PIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 + ++ L+ PK+++ +G + + GK TVHP Sbjct: 1 WWLDLELTLVKPKLIVAMGATALAALTDVKGRLQ-DVRGK---AVAIAGGRTLFVTVHPS 56 Query: 236 ELIQYPLIK------KNTWHALITLKKAL 258 L++ P + ++ +++ + Sbjct: 57 YLLRIPDERLKAEEMARFREDMLEIQRLM 85 >gi|260462332|ref|ZP_05810540.1| Uracil-DNA glycosylase superfamily [Mesorhizobium opportunistum WSM2075] gi|259031826|gb|EEW33094.1| Uracil-DNA glycosylase superfamily [Mesorhizobium opportunistum WSM2075] Length = 218 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 44/151 (29%), Gaps = 22/151 (14%) Query: 101 CATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEIMRTQI-------- 150 L+I+G P N +G+PF+G G++L L + R + Sbjct: 43 PPEGDAAVRLLIVGLAPGLRGANRTGRPFTGDYAGDLLYSTLIAHGFARGEFKARPDDGL 102 Query: 151 -----HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FF 202 I+ PP N+ + ++ + + +L +G+ Sbjct: 103 ELVGTAITNAVRCVPPENKPVGAEIATCRTFLVPTIARFPNLRAVLALGSIAHQSTVRAL 162 Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 G P I ++ H Sbjct: 163 GGRVAAYPFKHG----GQLPAGGITLFSSYH 189 >gi|89068529|ref|ZP_01155926.1| uracil-DNA glycosylase, putative [Oceanicola granulosus HTCC2516] gi|89045948|gb|EAR52008.1| uracil-DNA glycosylase, putative [Oceanicola granulosus HTCC2516] Length = 194 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 27/201 (13%), Positives = 56/201 (27%), Gaps = 31/201 (15%) Query: 80 LKSLLRSFHDCHLCSTSL------STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 L +R+ C + + G ++I G P + + +PF+ +G Sbjct: 4 LADDIRACRLCADRFRATATRHTPRPVPWF-DAGARILIAGQAPGARVHEAQRPFADASG 62 Query: 134 NMLDKML---QSIEIMRTQIHISMISPWHPPGNRN-----LSNIEMEICRPIIMRQIELI 185 L L + R +I + ++ P + I +M + + Sbjct: 63 VRLRDWLGLGEDEFYDRNRIAVVPMAFCFPGYDAKGSDLPPPPICAATWHDRVMAALPDL 122 Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQY 240 + + +G + T + T HP L + Sbjct: 123 GLR--ILVGGHAHRWHLGGRLSLTERV------ADWRAHAPHTFPLPHPSWRNTGWLKRN 174 Query: 241 PLIKKNTWHALITLKKALKNL 261 P L LK ++ + Sbjct: 175 P---WFAEELLPVLKARVREV 192 >gi|229524783|ref|ZP_04414188.1| uracil-DNA glycosylase [Vibrio cholerae bv. albensis VL426] gi|229338364|gb|EEO03381.1| uracil-DNA glycosylase [Vibrio cholerae bv. albensis VL426] Length = 190 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 59/166 (35%), Gaps = 14/166 (8%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + +R C L + + + ++IIG P + + P++ +G Sbjct: 2 LESLLTEIRQCTVCEPHLPLGA-NPVI-RAHPAAKILIIGQAPGTKVHQTSIPWNDASGE 59 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189 L + L + I I + +P R+ + C P+ ++ P ++ Sbjct: 60 RLRQWLGLDREAFYCEENIAIMPMGLCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQL 119 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 L IG ++++ ++ + + +W L HP Sbjct: 120 TLLIGQYAQHYYLSDKPSTLTETVQQWQRWAPS-----VLPLPHPS 160 >gi|153801535|ref|ZP_01956121.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|229512733|ref|ZP_04402201.1| uracil-DNA glycosylase [Vibrio cholerae TMA 21] gi|124122940|gb|EAY41683.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|229350243|gb|EEO15195.1| uracil-DNA glycosylase [Vibrio cholerae TMA 21] Length = 190 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 59/166 (35%), Gaps = 14/166 (8%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + +R C L + + + ++IIG P + + P++ +G Sbjct: 2 LESLLTEIRQCTVCEPHLPLGA-NPVI-RAHPAAKILIIGQAPGTKVHNTSIPWNDASGE 59 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189 L + L + I I + +P R+ + C P+ ++ P ++ Sbjct: 60 RLRQWLGLDREAFYCEGNIAIMPMGLCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQL 119 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 L IG ++++ ++ + + +W L HP Sbjct: 120 TLLIGQYAQHYYLSDKPSTLTETVQQWQRWAPS-----VLPLPHPS 160 >gi|229527236|ref|ZP_04416629.1| uracil-DNA glycosylase [Vibrio cholerae 12129(1)] gi|229335244|gb|EEO00728.1| uracil-DNA glycosylase [Vibrio cholerae 12129(1)] Length = 190 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 59/166 (35%), Gaps = 14/166 (8%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + +R C L + + + ++IIG P + + P++ +G Sbjct: 2 LESLLTEIRQCTVCEPHLPLGA-NPVI-RAHPAAKILIIGQAPGTKVHQTSIPWNDASGE 59 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189 L + L + I I + +P R+ + C P+ ++ P ++ Sbjct: 60 RLRQWLGLDREAFYCEENIAIMPMGLCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQL 119 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 L IG ++++ ++ + + +W L HP Sbjct: 120 TLLIGQYAQHYYLSDKPSTLTETVQQWQRWAPS-----VLPLPHPS 160 >gi|262192518|ref|ZP_06050668.1| uracil-DNA glycosylase [Vibrio cholerae CT 5369-93] gi|262031563|gb|EEY50151.1| uracil-DNA glycosylase [Vibrio cholerae CT 5369-93] Length = 190 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 59/166 (35%), Gaps = 14/166 (8%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + +R C L + + + ++IIG P + + P++ +G Sbjct: 2 LESLLTEIRQCTVCEPHLPLGA-NPVI-RAHPAAKILIIGQAPGTKVHQTSIPWNDASGE 59 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189 L + L + I I + +P R+ + C P+ ++ P ++ Sbjct: 60 RLRQWLGLDREAFYCEENIAIMPMGLCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQL 119 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 L IG ++++ ++ + + +W L HP Sbjct: 120 TLLIGQYAQHYYLSDKPSTLTETVQQWQRWAPS-----VLPLPHPS 160 >gi|158422875|ref|YP_001524167.1| uracil-DNA glycosylase superfamily protein [Azorhizobium caulinodans ORS 571] gi|158329764|dbj|BAF87249.1| uracil-DNA glycosylase superfamily protein [Azorhizobium caulinodans ORS 571] Length = 211 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 49/179 (27%), Gaps = 37/179 (20%) Query: 88 HDCHLC-------STSLS--------TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131 DC LC ST + + + L+I+G P N +G+PF+G Sbjct: 7 RDCPLCPRLVSFRSTWRAAEPSWFNAPVPTFGPQEARLLIVGLAPGLRGANRTGRPFTGD 66 Query: 132 T-GNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSNIEMEICRPI 177 G++L + L R I PP N+ + + Sbjct: 67 YAGDLLYETLIHFGFARGTYRADPDDGLELIDARIVNAVRCVPPENKPTTEEIRTCRPFL 126 Query: 178 IMRQIELISPKILLFIGNKTKNFF---FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 ++ ++ +G + + G + + H Sbjct: 127 AAAMAQMPRLSAIVALGKIAHDSVVVTLGERMSRAPFGHGTRREI----GGHTVFGSYH 181 >gi|312114935|ref|YP_004012531.1| uracil-DNA glycosylase superfamily [Rhodomicrobium vannielii ATCC 17100] gi|311220064|gb|ADP71432.1| Uracil-DNA glycosylase superfamily [Rhodomicrobium vannielii ATCC 17100] Length = 226 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 24/179 (13%), Positives = 49/179 (27%), Gaps = 23/179 (12%) Query: 99 TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKML-------------QSI 143 + + L+I+G P N +G+PF+G G +L + L Sbjct: 33 PVPSFGFPDAPLLIVGLAPGLRGANRTGRPFTGDYAGVLLYETLLDFGFASGTYDQRADD 92 Query: 144 EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF--- 200 + I+ PP N+ + E+ + +L +G + Sbjct: 93 GLSLRACRITNTVRCVPPENKPTPAEAAACRGFLSATIREMPHLRAILALGRIAFDGTLR 152 Query: 201 FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 + + G +L + H + T + K + Sbjct: 153 ALDLKVSQYKFAHGAAHDL---DGGRKLFGSYHCS--RYNTNTGRLTAEMFRDIFKQIA 206 >gi|254303288|ref|ZP_04970646.1| possible bacteriophage DNA polymerase/uracil DNA glycosylase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323480|gb|EDK88730.1| possible bacteriophage DNA polymerase/uracil DNA glycosylase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 195 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 67/191 (35%), Gaps = 12/191 (6%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 +LK + S + L D++ +G P K +G L Sbjct: 8 WEDLKFEVGSIGNELLPKDRQEVYIGMGDRNADVLFVGNDPKLYLAEDYKVEPQSSGAFL 67 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++L +E + +I+ +S +N + E + ++ QI LISPKI++F+G + Sbjct: 68 IRLLDVVEYLPETYYITTLSK-REIKIKNFNEEERKKLIDLLFMQILLISPKIVVFLGKE 126 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIKKNTW-----H 249 N G++ T + +I + KK + Sbjct: 127 VAQ-LIENKEIDFDNERGQFKKWRGDVETYL---TYDVETVIKARNDSGKKAAIALNFLN 182 Query: 250 ALITLKKALKN 260 + +K+ L N Sbjct: 183 DMKNVKERLNN 193 >gi|294785516|ref|ZP_06750804.1| DNA polymerase, bacteriophage-type [Fusobacterium sp. 3_1_27] gi|294487230|gb|EFG34592.1| DNA polymerase, bacteriophage-type [Fusobacterium sp. 3_1_27] Length = 195 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 12/191 (6%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 +LK S + L D++ IG P K +G L Sbjct: 8 WEDLKFEAGSIGNELLPKDRQEVYIGMGDRNADVLFIGNDPKLYLAEDYKVEPQSSGAFL 67 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++L +E + +I+ +S +N + E + ++ QI LISPKI++F+G + Sbjct: 68 IRLLDVVEYLPETYYITTLSK-REIKIKNFNEEERKKLIDLLFMQILLISPKIVVFLGKE 126 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIKKNTW-----H 249 N G++ T + +I + KK + Sbjct: 127 VAQ-LIENKEIDFDNERGQFKKWRGDVETYL---TYDVETVIKARNDSGKKAAIALNFLN 182 Query: 250 ALITLKKALKN 260 + +K+ L N Sbjct: 183 DMKNIKERLNN 193 >gi|290961266|ref|YP_003492448.1| hypothetical protein SCAB_69151 [Streptomyces scabiei 87.22] gi|260650792|emb|CBG73909.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length = 248 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 54/191 (28%), Gaps = 44/191 (23%) Query: 84 LRSFHDCHLCSTSL------------------STICATQTEGQDLMIIGYTPSDSD-NIS 124 + C + L+I+G P+ N + Sbjct: 28 ISGCRACPRLVEWREEVARTKRAAFADQEYWGRPVPGFGPPDAALLIVGLAPAAHGANRT 87 Query: 125 GKPFSG-KTGNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGNRNLSNIE 170 G+ F+G ++G++L L + + I+ PP + E Sbjct: 88 GRMFTGDRSGDVLYAALHDVGLASRGTAVGADDGLELYGVRITSPVHCAPP-ANKPTPEE 146 Query: 171 MEICRPIIMRQIELISP--KILLFIGNKTKNFFF------NNDAQKTYQNLGKWSNLCTP 222 + CRP ++R++EL+ P + ++ +G D + G Sbjct: 147 RDTCRPWLVRELELLRPTLRAVVVLGAFGWQAALPALGEAGWDVPRPRPLFG--HGTHAR 204 Query: 223 HSIIPTLATVH 233 H Sbjct: 205 LDGFDLYGCFH 215 >gi|85374214|ref|YP_458276.1| hypothetical protein ELI_06935 [Erythrobacter litoralis HTCC2594] gi|84787297|gb|ABC63479.1| hypothetical protein ELI_06935 [Erythrobacter litoralis HTCC2594] Length = 261 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 39/260 (15%), Positives = 79/260 (30%), Gaps = 17/260 (6%) Query: 5 RILSQEQILTIALFYADSGVYW-VFDEPNNEATYE---SQRKEKSIDSAIQPITNIRHIH 60 LS I ++ +G V DE + E S + + A P + Sbjct: 6 SSLSAADIAAAFDWWKLAGADVHVVDEASGWLDGETGTSPQHATAQPQAKAPPPKPKPPA 65 Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDCHL------CSTSLSTICATQTEGQDLMIIG 114 ++ + L F + + I + +L+++ Sbjct: 66 PAPHAALPGLSPVGSETDTWPTELAEFQRWWVEDENFAAQGAFPRIAPRGSADSELLVLL 125 Query: 115 YTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC 174 P + + FSG G +L+ L++ + Q++ + I P + S +E Sbjct: 126 PQP--EETDGDRLFSGPQGALLNGFLRAAGLDEEQVYFASILP-RHTLRPDWSEVEAAGY 182 Query: 175 RPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHP 234 + + L +PK L+ G + ++ Q+ IP L Sbjct: 183 GRLAAHHVALAAPKRLIVFGRD----ILSLLPHESAQDSANLRIFNHESGSIPLLPARDV 238 Query: 235 QELIQYPLIKKNTWHALITL 254 L + P + W + Sbjct: 239 ANLGRRPGFRARFWQQWLDF 258 >gi|302383620|ref|YP_003819443.1| uracil-DNA glycosylase superfamily [Brevundimonas subvibrioides ATCC 15264] gi|302194248|gb|ADL01820.1| Uracil-DNA glycosylase superfamily [Brevundimonas subvibrioides ATCC 15264] Length = 215 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 30/211 (14%), Positives = 57/211 (27%), Gaps = 33/211 (15%) Query: 81 KSLLRSFHDCHLC--------STSLS-------TICATQTEGQDLMIIGYTPSDSD-NIS 124 ++ DC LC + L++ G P + N + Sbjct: 4 RTDPEPPRDCPLCPRLVAYREENRRQNPDWWNGPAPSFGDPDARLLVAGLAPGRTGANRT 63 Query: 125 GKPFSGK-TGNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIE 170 G+PF+G G +L + L I+ PP N+ L E Sbjct: 64 GRPFTGDGAGWILYETLIKTGFATGTYDARPDDGLTLVDCMITNAVRCAPPQNKPLPIEE 123 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230 + R L K+++ +G+ ++ + L Sbjct: 124 ATCRPFLKARLDALPRLKVIVTLGDVSRRSVLKAMGLPGSAM-ASGHGMEAEIGGYTLLN 182 Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + H L + T + + + L Sbjct: 183 SYHCSRL--NTNTGRLTPEMFEAIFRRARAL 211 >gi|84393078|ref|ZP_00991844.1| hypothetical protein V12B01_01742 [Vibrio splendidus 12B01] gi|84376330|gb|EAP93212.1| hypothetical protein V12B01_01742 [Vibrio splendidus 12B01] Length = 197 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 60/178 (33%), Gaps = 18/178 (10%) Query: 80 LKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 L +R C L + I A L+IIG P + S P++ +G L Sbjct: 5 LLKEIRQCRACEPHLSHGANPVIQA--HPNARLLIIGQAPGIKVHESSIPWNDASGERLR 62 Query: 138 KML---QSIEIMRTQIHISMISPWHPPGNR--NLSNIEMEICRPIIMRQIELISPKILLF 192 + L ++ I + +P + +L + L + ++ L Sbjct: 63 EWLGIDSDTFYDEQKVAIVPMGFCYPGKGKSGDLPPRKECAELWHNKVLQSLPNIQMTLL 122 Query: 193 IGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248 IG +N++ N T + + W +P HP + + KKN W Sbjct: 123 IGQYAQNYYLTNKTTSTLTETVRNWQVWAPDFLPLP-----HPSP--RNNIWLKKNPW 173 >gi|315230312|ref|YP_004070748.1| phage SPO1 DNA polymerase-like protein [Thermococcus barophilus MP] gi|315183340|gb|ADT83525.1| phage SPO1 DNA polymerase-like protein [Thermococcus barophilus MP] Length = 247 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 62/163 (38%), Gaps = 11/163 (6%) Query: 46 IDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC----HLCSTS-LSTI 100 + P + Q+A +A+ L LK+ + H L Sbjct: 46 AKTVYNPKERFLVKNEKDKQKAFKLAELYNEL--LKNPTKFCHKEYYEYQLKVKRFEGLP 103 Query: 101 CATQTEGQDLMIIGYTPSDSDN-ISGKPFS-GKTGNMLDKMLQSIEIMRTQIHISMISPW 158 A G ++++G P +G F +G +L K L S+ I ++I+ + Sbjct: 104 FANGWVGSKVVLVGEAPGRKGCGYTGICFYRDASGMLLRKALFSLGINPDFVYITNVVKC 163 Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 +PP N+ + E+ + +++E++ PK + +G + Sbjct: 164 NPPENKLKGVDKRELSL--LKKELEILRPKAIFALGRTAEKAL 204 >gi|163786828|ref|ZP_02181276.1| 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase [Flavobacteriales bacterium ALC-1] gi|159878688|gb|EDP72744.1| 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase [Flavobacteriales bacterium ALC-1] Length = 190 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 57/165 (34%), Gaps = 11/165 (6%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 + +L + C AT ++IIG P + SG P+ ++G L Sbjct: 1 MEDLLHNISQCTICKAHLPLGPRPVATAHINSKIIIIGQAPGTKVHDSGIPWDDQSGKKL 60 Query: 137 DKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI--LL 191 + L I + +P + C P Q+ PK+ ++ Sbjct: 61 RQWLNVTDEQFYNTENFAIIPMGFCYPGKGKTGDLPPRPECAPEWHEQLLEKMPKVELII 120 Query: 192 FIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQ 235 IG + ++ + A++T + +G++ IP HP Sbjct: 121 LIGAYAQKYYLKDKAKRTLTETVGEYKTYLPKFFPIP-----HPS 160 >gi|240102600|ref|YP_002958909.1| Uracil-DNA glycosylase superfamily protein [Thermococcus gammatolerans EJ3] gi|239910154|gb|ACS33045.1| Uracil-DNA glycosylase superfamily protein [Thermococcus gammatolerans EJ3] Length = 254 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 40/103 (38%), Gaps = 4/103 (3%) Query: 101 CATQTEGQDLMIIGYTPSDSDNISG--KPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158 A G ++++G P + +G +L K L S+ I ++I+ Sbjct: 110 FANGWTGSKVVLVGEAPGRRGCGKTGVCFYRDASGMLLRKTLFSLGINPDFVYITNAVKC 169 Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 +PP NR E + R++E++ P + +G + Sbjct: 170 NPPNNRLSRVPEGAYEL--LARELEILRPGTIFALGRTAERAL 210 >gi|300704296|ref|YP_003745899.1| uracil-DNA glycosylase protein [Ralstonia solanacearum CFBP2957] gi|299071960|emb|CBJ43290.1| uracil-dna glycosylase protein [Ralstonia solanacearum CFBP2957] Length = 206 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 28/178 (15%), Positives = 58/178 (32%), Gaps = 16/178 (8%) Query: 84 LRSFHDCHLCSTS-----LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDK 138 L C LC+ + A ++I+G P + +G P++ ++G+ L + Sbjct: 17 LHDVRACRLCAGVLPQEPRPIVMAD--RRARVLIVGQAPGRIVHETGIPWNDRSGDRLRQ 74 Query: 139 MLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFI 193 LQ +I + + P + C P R + P K+ L + Sbjct: 75 WLQIGYDDFYADQRIAVVPMGFCFPGTGPSGDLPPRPECAPQWHRPLLTAMPGLKLALLV 134 Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTWHA 250 G + ++ + + ++ + HP + K+N W Sbjct: 135 GGYAQRYYLDVPPGGSLTDVVR-HGPVRDAEGRVLFPLPHPSP--RNLAWFKRNPWFD 189 >gi|169350329|ref|ZP_02867267.1| hypothetical protein CLOSPI_01090 [Clostridium spiroforme DSM 1552] gi|169293112|gb|EDS75245.1| hypothetical protein CLOSPI_01090 [Clostridium spiroforme DSM 1552] Length = 192 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 25/169 (14%), Positives = 62/169 (36%), Gaps = 13/169 (7%) Query: 75 CSLHELKSLLRSFHDCHLCSTSL-STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 +L ++ C + + +M IG PS+ N + PFS +G Sbjct: 2 KEFDKLIREIKECRYCENKFDHEFHPVVW-GHQNAKIMQIGQAPSNKVNQNLVPFSDLSG 60 Query: 134 NMLDKMLQSIE---IMRTQIHISMISPWHPPGNRNLSNIEMEIC--RPIIMRQIELISPK 188 L + Q + + +++ ++ +P + C + + ++++L++ + Sbjct: 61 KRLLQWYQIDQGTFYNQDIFYLTSLAHCYPGKAAGSGDRPPPKCCYQKWLNQEMKLVNNE 120 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237 I + +G+ + FF + ++ + T+ HP L Sbjct: 121 IYIIVGSYSAKLFFPDKKLTDL-----VFENQRLNNKL-TIVLPHPSPL 163 >gi|71281161|ref|YP_269828.1| phage SPO1 DNA polymerase-related protein [Colwellia psychrerythraea 34H] gi|71146901|gb|AAZ27374.1| phage SPO1 DNA polymerase-related protein [Colwellia psychrerythraea 34H] Length = 192 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 59/197 (29%), Gaps = 20/197 (10%) Query: 75 CSLHELKSLLRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 L + +R C + + ++I G P + SG PF +G Sbjct: 2 SDFSTLLNEVRRCTICASQLEHGVRPVL-QVHPKAKILIAGQAPGLKVHTSGVPFDDASG 60 Query: 134 NMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 L + L + ++ I + P + + C P R+ L K + Sbjct: 61 KRLREWLGLSREEFYDPEKVAILPMGFCFPGSGKTGDLAPRKECAP-AWREKILAHLKQI 119 Query: 191 ---LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKN 246 + +G+ + + + W + HP + + KKN Sbjct: 120 EVTIVLGSYAQKYHMGLKNASVTDLVKSWETYWPN-----IIPLPHPSP--RNNIWLKKN 172 Query: 247 TW---HALITLKKALKN 260 W L L+ ++ Sbjct: 173 PWFEIELLPVLRSRIRE 189 >gi|293400792|ref|ZP_06644937.1| phage SPO1 DNA polymerase-related protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305818|gb|EFE47062.1| phage SPO1 DNA polymerase-related protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 196 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 48/170 (28%), Gaps = 14/170 (8%) Query: 75 CSLHELKSLLRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 E+K L C + I + I PS + SG PF+ +G Sbjct: 2 SDFEEIKKELLQCRLCENIFPHEPRPIF-QGNPHAKIFQISQAPSIHVHESGLPFNDASG 60 Query: 134 NMLDKMLQ----SIEIMRTQIHISMISPWHPPGNRN--LSNIEMEICRPIIMRQIELISP 187 L + + +I+ + +P + +++ ++ Sbjct: 61 KRLRQEWYQISDACFYDPNNFYIASMGHCYPGKKERGGDCLPPKHCAEHWLQKEMAMVDN 120 Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237 ++ + IG ++ F N T H HP L Sbjct: 121 ELYIIIGALAASYIFPKIPFHDL-----VFNTQTLHD-RKAFILPHPSPL 164 >gi|116618023|ref|YP_818394.1| Uracil-DNA glycosylase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096870|gb|ABJ62021.1| Uracil-DNA glycosylase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 191 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 16/162 (9%), Positives = 49/162 (30%), Gaps = 19/162 (11%) Query: 98 STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP 157 + + T + ++IIG P + ++ +G+ L + L Sbjct: 22 NPVFYT-PKSAKILIIGQAPGKKVQETEIMWNDASGDRLREWLDVDRKQFYDSGNFGFIS 80 Query: 158 WHPPGNRNLSNIEME-----ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN 212 + + + + + ++++ IG+ + ++ + + Sbjct: 81 MDFYYPGKAKSGDKPPRGSIAKKWHPKLIASMPNLQLIVLIGSYAQKYYLHLARTE---- 136 Query: 213 LGKWSNLCTPHSII--PTLATVHPQ-----ELIQYPLIKKNT 247 K +++ + +HP L + P +K Sbjct: 137 --KITDVVKNYKSYLPKYFPIIHPSPRNNIWLNRNPWFEKEV 176 >gi|169824614|ref|YP_001692225.1| hypothetical protein FMG_0917 [Finegoldia magna ATCC 29328] gi|167831419|dbj|BAG08335.1| conserved hypothetical protein [Finegoldia magna ATCC 29328] Length = 190 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 55/167 (32%), Gaps = 19/167 (11%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 ++IIG P +G F+ K+G L K L E + I P Sbjct: 31 NPKSKILIIGQAPGGKVEETGILFNDKSGENLVKWLGISEDILHSED-FSIIPMDFYYPG 89 Query: 165 NLSNIEMEICRPIIMRQIE------LISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWS 217 + + + R I ++ L K+ + IG + F+ + +K + + + Sbjct: 90 KGKSGD-KAPRSFIAKEYHPLLLNELKDIKLTILIGAYAQKFYLKDKFKKNLTETVKSYK 148 Query: 218 NLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALK 259 + HP + + P ++ L + K L+ Sbjct: 149 EFLPEY-----FPIAHPSPLNNRWISKNPFFREEVLPDLKKIVKKLR 190 >gi|330827006|ref|YP_004390309.1| phage SPO1 DNA polymerase-like protein [Alicycliphilus denitrificans K601] gi|329312378|gb|AEB86793.1| phage SPO1 DNA polymerase-related protein [Alicycliphilus denitrificans K601] Length = 245 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 46/131 (35%), Gaps = 15/131 (11%) Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI 169 +++ +P+ + P +G+ G +LD ML+++ + R + Sbjct: 104 WLVVLESPTPGE-----PLAGEVGRLLDNMLRAMGLHRHPRTFVATL----GRPAPGLSA 154 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP-HSIIPT 228 E + + + + P ++L +G + + LG+ P Sbjct: 155 EGVEPAAGLQQALATLRPAMVLVLGLAAARAVLGSR-----EPLGRLRAATHRLADGTPA 209 Query: 229 LATVHPQELIQ 239 + + P L++ Sbjct: 210 VVSYDPAYLLR 220 >gi|319407297|emb|CBI80938.1| conserved hypothetical protein [Bartonella sp. 1-1C] Length = 211 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 61/193 (31%), Gaps = 18/193 (9%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTE------GQDLMIIGYTPSDSDNISG 125 ++ + +L+ + S C L + + I G P + S Sbjct: 4 KQCEHIIKLEKDIHSCRVCIKHPHYLPPLPHEPRPVVYLSNTASIAIAGQAPGLRVHESL 63 Query: 126 KPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ- 181 PF+ +G L L R+ I + P + N S++ I + Sbjct: 64 IPFNDHSGIRLRNWLGVTSDEFYNRSLFAIVPMGFCFPGYDPNKSDLPPRNECREIWHEK 123 Query: 182 --IELISPKILLFIGNKTKNF-FFNNDAQKTYQNLGKWSNLCT--PHSIIPTLATVHPQE 236 + K++L IG+ + N + + + W N+ + + HP Sbjct: 124 VFQAMPQIKLVLAIGSYAHKWHITNLKYKTVSETVNDWKNILSIRQPRGYNVMPLPHPSW 183 Query: 237 LIQYPLI-KKNTW 248 + KK+ W Sbjct: 184 --RNTFWLKKHPW 194 >gi|315650342|ref|ZP_07903414.1| uracil DNA glycosylase [Eubacterium saburreum DSM 3986] gi|315487453|gb|EFU77763.1| uracil DNA glycosylase [Eubacterium saburreum DSM 3986] Length = 199 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 55/168 (32%), Gaps = 15/168 (8%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + +MI+G P +GK + K+G+ L + L + + + + P Sbjct: 34 PQNARVMIVGQAPGIKAQEAGKYWFDKSGDRLREWLGVDKKTFYESDVFAVIPMDFYYPG 93 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + E+ + +++ IG + ++ + + K Sbjct: 94 KGKSGDLPPRKDFAPKWHPRLLQEMPNIDLIILIGQYAQKYYLGDREKSNLTETVKAYKE 153 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALI-TLKKALKNL 261 P L VHP L + P +K L +K L ++ Sbjct: 154 YLP----RLLPLVHPSPRNLIWLKKNPWFEKEVVPMLQAKIKGYLNSI 197 >gi|170748170|ref|YP_001754430.1| uracil-DNA glycosylase superfamily protein [Methylobacterium radiotolerans JCM 2831] gi|170654692|gb|ACB23747.1| uracil-DNA glycosylase superfamily [Methylobacterium radiotolerans JCM 2831] Length = 205 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 26/189 (13%), Positives = 56/189 (29%), Gaps = 19/189 (10%) Query: 75 CSLHELKSLLRSFHDC--------HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126 + + + LR+ C L + + L I P + +G+ Sbjct: 2 PAFDDTAARLRACRLCRDSPLYGPPLPQEPRPIV--QGSATARLCIASQAPGTRAHRTGQ 59 Query: 127 PFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI-CRPIIMRQI 182 PF+ +G L L ++ ++ I + P + + C ++ Sbjct: 60 PFTDPSGVRLRAWLGLDEARFYDPARVAIVPMGSCFPGLDAKGGDRPPRRECAERWRAEL 119 Query: 183 ELISPKI--LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 P++ +L IG + + + +W + L HP + Sbjct: 120 FSGLPELELILVIGQYAQGWHLGRMEGGLTGTVRRWREILAEPRRPRVLPLPHPSW--RN 177 Query: 241 PLI-KKNTW 248 K+ W Sbjct: 178 NGWLKREPW 186 >gi|145590236|ref|YP_001156833.1| uracil-DNA glycosylase superfamily protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048642|gb|ABP35269.1| Uracil-DNA glycosylase superfamily [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 194 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 30/199 (15%), Positives = 69/199 (34%), Gaps = 19/199 (9%) Query: 74 ACSLHELKSLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 + +L +L +RS C I + ++I+G P + +G PF+ + Sbjct: 2 SQTLAKLVKEIRSCSLCADHLPLGPRPIIQVGS-SAKILIVGQAPGSRVHETGIPFNDPS 60 Query: 133 GNMLDKML---QSIEIMRTQIHISMISPWHP-PGNRNLSNIEMEICRPIIMRQIEL-ISP 187 G+ L + + + + +I + + P G E ++ +E + Sbjct: 61 GDRLREWMGIDKEVFYDEKKIALVPMGFCFPGTGKSGDLPPRPECADTWRVKLLEQLPNI 120 Query: 188 KILLFIGNKTKNFFFNN-DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYP 241 K+ + +G + + + + + + W + + HP L P Sbjct: 121 KLTIIVGQYAQAWHLDKGNKDNLTETVMAWKSYWP-----KAIPLPHPSPRNNIWLKNNP 175 Query: 242 LIKKNTWHAL-ITLKKALK 259 ++ +L +K LK Sbjct: 176 WFEEEVLPSLRRKVKAVLK 194 >gi|110678967|ref|YP_681974.1| hypothetical protein RD1_1663 [Roseobacter denitrificans OCh 114] gi|109455083|gb|ABG31288.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114] Length = 198 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 61/184 (33%), Gaps = 17/184 (9%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L +R+ C+ + I E ++I+G P ++ +PF +G+ Sbjct: 3 QDFDTLTRQMRACRLCNDLPLGPNPIF-QLDERAKILIVGQAPGRITHLKNRPFDDPSGD 61 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL- 190 L L +S +I I + P + +IC R+ + + K + Sbjct: 62 RLRGWLGIEKSAFYGDPRIGIFPMGLCFPGSGPSGDKPPPDICAM-TWREKTMRALKHVE 120 Query: 191 --LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLI 243 L +G + + +++ + + + L HP L Q P Sbjct: 121 LTLVLGAYAIAWHLPHLSRQ--SVVQAVRHASDGEDRMFVLP--HPSPRNNRWLKQNPWF 176 Query: 244 KKNT 247 + + Sbjct: 177 EADV 180 >gi|260101387|ref|ZP_05751624.1| DNA polymerase [Lactobacillus helveticus DSM 20075] gi|260084798|gb|EEW68918.1| DNA polymerase [Lactobacillus helveticus DSM 20075] Length = 109 Score = 56.7 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 34/67 (50%) Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161 + + LMI+G P ++ ++ PFSG G LDK L+ I + R Q++I+ P Sbjct: 42 GSGPKHPLLMIVGEAPGRNEIVNNIPFSGDAGKELDKSLKQIGLSRDQVYITSAVRSRPF 101 Query: 162 GNRNLSN 168 + + + Sbjct: 102 SVKKVFS 108 >gi|83593195|ref|YP_426947.1| uracil-DNA glycosylase superfamily protein [Rhodospirillum rubrum ATCC 11170] gi|83576109|gb|ABC22660.1| Uracil-DNA glycosylase superfamily [Rhodospirillum rubrum ATCC 11170] Length = 214 Score = 56.7 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 46/153 (30%), Gaps = 20/153 (13%) Query: 88 HDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKML----- 140 D + + + + G L+++G P N +G+PF+G G++L L Sbjct: 28 RDFPDWANA--PVPSFGPLGARLLVVGLAPGVRGANRTGRPFTGDYAGDLLYATLIDLGL 85 Query: 141 --------QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192 + + I+ PP N+ ++ + + + + +L Sbjct: 86 MTGVFDRRADDGLTPIDVRITNAVRCVPPENKPTGPEQVACRPFLAAEIAAMPALRGILA 145 Query: 193 IGNKTKNFF---FNNDAQKTYQNLGKWSNLCTP 222 +G + G + Sbjct: 146 LGRVAHEAILRTLGQPLKAHPFAHGALHPMPGG 178 >gi|254172064|ref|ZP_04878740.1| phage SpO1 DNA polymerase-related protein [Thermococcus sp. AM4] gi|214033960|gb|EEB74786.1| phage SpO1 DNA polymerase-related protein [Thermococcus sp. AM4] Length = 248 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 43/103 (41%), Gaps = 4/103 (3%) Query: 101 CATQTEGQDLMIIGYTPSDSDNISG--KPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158 A G ++++G P + +G++L K+L + I ++I+ + Sbjct: 104 FANGWTGSRVVLVGEAPGRRGCGKTGVCFYRDASGSLLRKVLFHLGINPDFVYITNVVKC 163 Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 +PP NR E + R++E++ P+ + +G + Sbjct: 164 NPPSNRLSRVPEGAYEL--LARELEILEPEAVFALGRTAERAL 204 >gi|218710874|ref|YP_002418495.1| hypothetical protein VS_2958 [Vibrio splendidus LGP32] gi|218323893|emb|CAV20254.1| Hypothetical protein VS_2958 [Vibrio splendidus LGP32] Length = 197 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 61/178 (34%), Gaps = 18/178 (10%) Query: 80 LKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 L +R C L + I A L+IIG P + S P++ +G L Sbjct: 5 LLKEIRQCRACEPHLSHGANPVIQA--HPNARLLIIGQAPGIKVHESSIPWNDASGERLR 62 Query: 138 KML---QSIEIMRTQIHISMISPWHPPGNR--NLSNIEMEICRPIIMRQIELISPKILLF 192 + L ++ I + +P + +L + L + ++ L Sbjct: 63 EWLGIDSDTFYDEQKVAIVPMGFCYPGKGKSGDLPPRKECAELWHNKVLQSLPNIQMTLL 122 Query: 193 IGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248 IG +N++ + A T + + W +P HP + + KKN W Sbjct: 123 IGQYAQNYYLKDKATSTLTETVRNWQAWAPEFLPLP-----HPSP--RNNIWLKKNPW 173 >gi|109900332|ref|YP_663587.1| uracil-DNA glycosylase superfamily protein [Pseudoalteromonas atlantica T6c] gi|109702613|gb|ABG42533.1| Uracil-DNA glycosylase superfamily [Pseudoalteromonas atlantica T6c] Length = 169 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 55/150 (36%), Gaps = 13/150 (8%) Query: 104 QTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ---SIEIMRTQIHISMISPWHP 160 + ++I+G P + + KP++ +G L K L I I ++ +P Sbjct: 11 GNQRSKILIVGQAPGIKAHETNKPWNDASGERLRKWLNLDVQHFYNPDNIAILPMAFCYP 70 Query: 161 PGNRNLSNIEMEICRP-IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + C P R I + K +L IG +N++ + T + W Sbjct: 71 GKASSGDKPPRKECAPLWHERLINSMQIKHVLLIGQYAQNYYLQDKRSLTERVK-DWQAY 129 Query: 220 CTPHSIIPTLATVHPQELIQYPLI-KKNTW 248 ++P HP + + KKN W Sbjct: 130 QPRFFVLP-----HPSP--RNNIWLKKNPW 152 >gi|300172892|ref|YP_003772057.1| uracil DNA glycosylase superfamily protein [Leuconostoc gasicomitatum LMG 18811] gi|299887270|emb|CBL91238.1| Uracil DNA glycosylase superfamily protein [Leuconostoc gasicomitatum LMG 18811] Length = 190 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 19/164 (11%), Positives = 51/164 (31%), Gaps = 14/164 (8%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 ++IIG P SG + +G+ L + + + + + P Sbjct: 28 PTSAKIVIIGQAPGLRVQNSGIMWHDASGDRLREWMGISKDVFYNSGRIGVIPMDFYYPG 87 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + ++ + ++ + +G+ + ++ ++Q + K Sbjct: 88 KAKSGDLPPRKGIADKWHSRLLKQMPNIQMTILVGSYAQKYYLKLNSQAKITTVIKDYQK 147 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258 P+ VHP L + P ++ L + + Sbjct: 148 YLPNY----FPIVHPSPRNNIWLKKNPWFEQKVVPDLQKMISQI 187 >gi|261210441|ref|ZP_05924735.1| uracil-DNA glycosylase [Vibrio sp. RC341] gi|260840499|gb|EEX67065.1| uracil-DNA glycosylase [Vibrio sp. RC341] Length = 190 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 59/166 (35%), Gaps = 14/166 (8%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + +R C L + + + ++IIG P + + P++ +G Sbjct: 2 LESLLTEIRQCTVCEPHLPLGA-NPVI-RAHPAAKILIIGQAPGTKVHNTSIPWNDASGE 59 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189 L + L + + I I + +P R+ + C P+ ++ P ++ Sbjct: 60 RLRQWLGLDREAFYCQENIAIMPMGLCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQL 119 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 L IG ++++ + + + +W L HP Sbjct: 120 TLLIGQYAQHYYLPDKPATLTETVQQWQRWAPS-----VLPLPHPS 160 >gi|85373551|ref|YP_457613.1| hypothetical protein ELI_03620 [Erythrobacter litoralis HTCC2594] gi|84786634|gb|ABC62816.1| hypothetical protein ELI_03620 [Erythrobacter litoralis HTCC2594] Length = 189 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 65/193 (33%), Gaps = 21/193 (10%) Query: 80 LKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKM 139 L++ + + C AT + L+IIG P + + SG P+ +G+ L + Sbjct: 3 LQAEIAACRICADKLAHDPRPVATFSSTARLLIIGQAPGSAVHASGIPWDDPSGDRLREW 62 Query: 140 LQSIEIMRTQIHISMISP---WHP----PGNRNLSNIEMEICRPIIMRQIELISPKILLF 192 + + P +P G+ ++ ++ ++ L Sbjct: 63 AGIDKATMYDPARVALVPMGFCYPGKGKSGDLPPRPECAPAWHERVLAELPCD--RLTLL 120 Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNT 247 +G+ + ++ + ++T + P HP + + P +K+ Sbjct: 121 VGSYAQAYYLPDTRKQTLAERVREFETFLPV----FFPLPHPSWRSTLFMRKNPWFEKDV 176 Query: 248 WHALITLKKALKN 260 L LK+ + Sbjct: 177 ---LPVLKRRIAE 186 >gi|317121388|ref|YP_004101391.1| uracil-DNA glycosylase [Thermaerobacter marianensis DSM 12885] gi|315591368|gb|ADU50664.1| Uracil-DNA glycosylase superfamily [Thermaerobacter marianensis DSM 12885] Length = 328 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 24/168 (14%), Positives = 54/168 (32%), Gaps = 35/168 (20%) Query: 69 SIAQKACSLHELKSLLRSFHDCHL------------------CSTSLSTICATQTEGQDL 110 S + L + + + C + + L Sbjct: 27 SARDQVDQLARINRDIVACRRCPRLVAYTAEVARTKRRAYRDWDYWGRPVPSFGDPLARL 86 Query: 111 MIIGYTPSDSD-NISGKPFSGK-TGNMLDKML-------------QSIEIMRTQIHISMI 155 +I+G P+ N +G+ F+G +G+ L + L + + +I+ Sbjct: 87 LIVGLAPAAHGANRTGRMFTGDSSGDWLYRALYRAGFASQPTSTHRDDGLELRDAYITAT 146 Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELIS-PKILLFIGNKTKNFFF 202 PP N S E+ C + R++E ++ ++++ +G Sbjct: 147 CHCAPPDN-RPSRDELAACSAFLARELEALATVRVIVCLGQIAFQGVL 193 >gi|145297626|ref|YP_001140467.1| uracil-DNA glycosylase [Aeromonas salmonicida subsp. salmonicida A449] gi|142850398|gb|ABO88719.1| uracil-DNA glycosylase [Aeromonas salmonicida subsp. salmonicida A449] Length = 193 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 63/178 (35%), Gaps = 16/178 (8%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L +R+ C E L+IIG P + SG P+ +G+ Sbjct: 2 NRLDTLFEQIRACRLCEAHLPLGPRPVIRGKESARLLIIGQAPGTRVHASGIPWDDPSGD 61 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNR--NLSNIEMEICRPIIMRQIELISPKI 189 L L ++ ++I I + +P + +L + L + ++ Sbjct: 62 RLRHWLGVDKTTFYDESRIAIMPMGLCYPGKGKSGDLPPRPECAPTWHDKVLMLLPNIEL 121 Query: 190 LLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYP 241 L IG ++ ++ + + + + +W++ C +P HP L + P Sbjct: 122 TLLIGQYSQQYYLGKAGKGSLTETVRQWADYCPAWLPLP-----HPSPRNTFWLRKNP 174 >gi|319408527|emb|CBI82180.1| conserved hypothetical protein [Bartonella schoenbuchensis R1] Length = 211 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 63/186 (33%), Gaps = 21/186 (11%) Query: 72 QKACSLHELKSLLRSFHDC--------HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123 QK + +L +RS C L + ++ + I G P + Sbjct: 4 QKCDQIVKLGEQIRSCRVCVERPHYFPPLPHEPKPVV--YLSKTASIAIAGQAPGLRVHE 61 Query: 124 SGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180 + PF+ ++G+ L L + R+ I + P ++N S++ I Sbjct: 62 TSIPFNDRSGDRLRDWLGVTSNEFYDRSLFAIVPMGFCFPGYDQNKSDLPPRRECQEIWH 121 Query: 181 Q---IELISPKILLFIGNKTKNFFFNN-DAQKTYQNLGKWSNLCT--PHSIIPTLATVHP 234 + + K++L IGN + + + + + W N+ + + HP Sbjct: 122 EKVFQAMPQIKLVLAIGNYAQKWHIAELKHKTVSETVNDWKNILSIRQPRGYNVMPLPHP 181 Query: 235 QELIQY 240 + Sbjct: 182 SW--RN 185 >gi|167005572|ref|ZP_02271330.1| hypothetical protein Cjejjejuni_05090 [Campylobacter jejuni subsp. jejuni 81-176] Length = 194 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 67/179 (37%), Gaps = 10/179 (5%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 ++ + ELK L+ S C T ++ + + L+I+ S+N SG + K Sbjct: 24 EQVQNFQELKQLVSSCTLCQFSKTRKFSLMEPKIKNAKLLILDVFGQKSENESGILLNSK 83 Query: 132 TGNMLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 G L + + Q + + + S + G + + ++ C P +++LI P L Sbjct: 84 KGEKLKRYIYQILGLCDEDFYFSYLFKCFCNGKFDDFS--LQSCLPFFWNELKLIQPAFL 141 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249 L +G T + + G+ + + + + P +K ++ Sbjct: 142 LCLGEYTFKSL---GFKDYHILKGEVFAY----KNFFIMPSYDLDFIEKNPSYEKISYK 193 >gi|304386387|ref|ZP_07368720.1| uracil-DNA glycosylase [Pediococcus acidilactici DSM 20284] gi|304327744|gb|EFL94971.1| uracil-DNA glycosylase [Pediococcus acidilactici DSM 20284] Length = 210 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 21/167 (12%), Positives = 49/167 (29%), Gaps = 15/167 (8%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 ++I+G P + ++ K+G+ L + + P Sbjct: 47 NPQARILIVGQAPGKRVQDTEIIWNDKSGDRLRDWMGISRETFYNSGKIAVLPMDFYYPG 106 Query: 165 N-----LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + + + + ++ L IG ++ ++ + T L K Sbjct: 107 KGKSGDIPPRKAVAEKWHPQMVAAMPNIQLTLLIGAYSQRYYLKTTPKTTTTELVKNYQS 166 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALI-TLKKALKN 260 P VHP L + P ++ L + L++ Sbjct: 167 FLP----KYFPLVHPSPRNNIWLARNPWFEEQVVPDLKRRVAAILQD 209 >gi|317180465|dbj|BAJ58251.1| hypothetical protein HPF32_0669 [Helicobacter pylori F32] Length = 209 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 27/184 (14%), Positives = 60/184 (32%), Gaps = 13/184 (7%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 ++ + + + C S + L I TP + + ML+ Sbjct: 37 KQVYEGIENCNLCKRHQNSK-PVIGLFNPTSKLTFITLTP--MLDSQLNFLNNLKAAMLE 93 Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++Q I + N E+ C + Q++ + K+++ G Sbjct: 94 SVIQKVFNCPLKDCSILSLLKC--DSNSLNLEEEINACLFHLTWQLDNSASKVIVVFGEI 151 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 N ++ G+ +L T H L+T +++++ P +KK + + Sbjct: 152 LPKRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFKIVLQ 204 Query: 257 ALKN 260 L Sbjct: 205 FLNQ 208 >gi|262404995|ref|ZP_06081547.1| uracil-DNA glycosylase [Vibrio sp. RC586] gi|262348834|gb|EEY97975.1| uracil-DNA glycosylase [Vibrio sp. RC586] Length = 190 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 58/166 (34%), Gaps = 14/166 (8%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + +R C L + + + ++IIG P + + P++ +G Sbjct: 2 LESLLTEIRQCTVCEPHLPLGA-NPVI-RAHPAAKILIIGQAPGTKVHNTSIPWNDASGE 59 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189 L + L + + I I + +P R+ + C P+ ++ P ++ Sbjct: 60 RLRQWLGLDREAFYCQKNIAIMPMGLCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQL 119 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 L IG +N++ + + + W L HP Sbjct: 120 TLLIGQYAQNYYLPDKPATLTETVQHWQRWAPS-----VLPLPHPS 160 >gi|302380393|ref|ZP_07268862.1| uracil-DNA glycosylase family protein [Finegoldia magna ACS-171-V-Col3] gi|302311797|gb|EFK93809.1| uracil-DNA glycosylase family protein [Finegoldia magna ACS-171-V-Col3] Length = 190 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 56/167 (33%), Gaps = 19/167 (11%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 ++IIG P + +G F+ K+G L K L E + I P Sbjct: 31 NPKSKILIIGQAPGEKVEETGILFNDKSGENLVKWLGISEDILHSED-FSIIPMDFYYPG 89 Query: 165 NLSNIEMEICRPIIMRQIE------LISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWS 217 + + + R I ++ L K+ + IG + F+ + +K + + + Sbjct: 90 KGKSGD-KAPRSFIAKEYHPLLLNELKDIKLTILIGAYAQKFYLKDKFKKNLTETVKSYK 148 Query: 218 NLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALK 259 + HP + + P ++ L + K ++ Sbjct: 149 EFLPEY-----FPIAHPSPLNNRWISKNPFFREEVLPDLKKIVKKVR 190 >gi|153826742|ref|ZP_01979409.1| conserved hypothetical protein [Vibrio cholerae MZO-2] gi|149739457|gb|EDM53695.1| conserved hypothetical protein [Vibrio cholerae MZO-2] Length = 190 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 61/166 (36%), Gaps = 14/166 (8%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + +R C L + + + ++IIG P + + P++ +G+ Sbjct: 2 LESLLTEIRQCTVCEPHLPLGA-NPVI-RAHSAAKILIIGQAPGTKVHNTSIPWNDASGD 59 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189 L + L + +I I + +P R+ + C P+ ++ P ++ Sbjct: 60 RLRQWLDLDRDTFYCEEKIAIMPMGLCYPGRGRSGDLPPRKECAPLWHAKVLEQLPNRQL 119 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 L IG ++++ ++ + + +W L HP Sbjct: 120 TLLIGQYAQHYYLSDKPSTLTETVQQWQRWAPS-----VLPLPHPS 160 >gi|163795221|ref|ZP_02189189.1| Uracil-DNA glycosylase superfamily protein [alpha proteobacterium BAL199] gi|159179619|gb|EDP64148.1| Uracil-DNA glycosylase superfamily protein [alpha proteobacterium BAL199] Length = 195 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 56/171 (32%), Gaps = 16/171 (9%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 +L +L + +R+ C L+IIG P + SG P++ ++G+ Sbjct: 2 NALTDLLTRIRACRHCEAHLPLGPRPVLVAHPQARLLIIGQAPGTKVHESGIPWNDRSGD 61 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHP-----PGNRNLSNIEMEICRPIIMRQIELIS 186 L L +I I + +P G+ + ++ + + Sbjct: 62 RLRDWLGVKHDTFYNDPRIAIVPMGFCYPGVLPNGGDAPPRPECAPMWHDAVLAHLPDV- 120 Query: 187 PKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQE 236 ++++ G + + ++T + + W + HP Sbjct: 121 -ELVVLAGMYAQARYLGKTRKRTLTETVAAWREY-----GPKFIPLPHPSW 165 >gi|332142727|ref|YP_004428465.1| uracil-DNA glycosylase [Alteromonas macleodii str. 'Deep ecotype'] gi|332142851|ref|YP_004428589.1| uracil-DNA glycosylase [Alteromonas macleodii str. 'Deep ecotype'] gi|327552749|gb|AEA99467.1| uracil-DNA glycosylase [Alteromonas macleodii str. 'Deep ecotype'] gi|327552873|gb|AEA99591.1| uracil-DNA glycosylase [Alteromonas macleodii str. 'Deep ecotype'] Length = 195 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 53/163 (32%), Gaps = 12/163 (7%) Query: 78 HELKSLLRSFHDCHLCSTSL-STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 EL + R+ C + I +T + ++IIG P + SG F+ +G+ L Sbjct: 9 DELAAEARNCALCAQYLPHTPNPIFST-AKFAKVLIIGQAPGLKAHESGIAFNDASGDRL 67 Query: 137 DKML---QSIEIMRTQIHISMISPWHP-PGNRNLSNIEMEICRPIIMRQIELISPKILLF 192 L + I I + P N + E + I P++ ++ Sbjct: 68 RSWLSVSKPTFYNPKLISILPMGFCFPGYKNGADAPPRKECAPTWHQAFLSQIRPELTVY 127 Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 IG + ++ T ++ L HP Sbjct: 128 IGRYAQQYYLPEYKNLTDA----VYTTFAANAGHVALP--HPS 164 >gi|288956932|ref|YP_003447273.1| uracil-DNA glycosylase [Azospirillum sp. B510] gi|288909240|dbj|BAI70729.1| uracil-DNA glycosylase [Azospirillum sp. B510] Length = 203 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 28/187 (14%), Positives = 48/187 (25%), Gaps = 17/187 (9%) Query: 67 ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126 +D Q +L L + R+ C L+I+G P + SG Sbjct: 2 SDETRQGGPALDRLFAQARACTLCEAALPHGCRPVLRGGATARLLIVGQAPGARVHASGI 61 Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISP---WH---PPGNRNLSNIEMEICRPIIMR 180 P+ +G+ L K L + P + P + Sbjct: 62 PWDDASGDRLRKWLAMDSTTFYDESRIAVVPMGLCYPGTMPKGGDYPPRPECAPLWHPPL 121 Query: 181 QIELISPKILLFIGNKT-KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHP----- 234 L ++ L IG + + + W + HP Sbjct: 122 LEALSGIRLTLLIGQYAQARYLGGRRKATMTETVASWREY-----GPAFIPLPHPSWRNT 176 Query: 235 QELIQYP 241 L + P Sbjct: 177 AWLNRNP 183 >gi|154247758|ref|YP_001418716.1| uracil-DNA glycosylase superfamily protein [Xanthobacter autotrophicus Py2] gi|154161843|gb|ABS69059.1| Uracil-DNA glycosylase superfamily [Xanthobacter autotrophicus Py2] Length = 233 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 53/180 (29%), Gaps = 36/180 (20%) Query: 89 DCHLCS--------------TSLS-TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT 132 DC LC + + A E L+I+G P N +G+PF+G Sbjct: 25 DCPLCPRLADFRHDWQAAEPGWHNAPVPAFGPEDARLLIVGLAPGLRGANRTGRPFTGDY 84 Query: 133 -GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPII 178 G++L L T I PP N + E+ CRP + Sbjct: 85 AGDLLYATLIEYGFATGTYAAHPEDGLTLTDARIVNAVRCVPPQN-KPTPEEIRTCRPFL 143 Query: 179 MR-QIELISPKILLFIGNKTKN---FFFNNDAQKTYQNLGKWSNLCTPHSI-IPTLATVH 233 + ++ +G + A + G + + A+ H Sbjct: 144 SAPMAAMPRLAAIVTLGKIAHDSTLAALGQKASRLKFGHGVADTITDGTLGPVRLFASYH 203 >gi|148981200|ref|ZP_01816326.1| hypothetical protein VSWAT3_16095 [Vibrionales bacterium SWAT-3] gi|145960956|gb|EDK26282.1| hypothetical protein VSWAT3_16095 [Vibrionales bacterium SWAT-3] Length = 197 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 64/178 (35%), Gaps = 18/178 (10%) Query: 80 LKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 L + +R C L + I A L+IIG P + S P++ +G L Sbjct: 5 LLTEIRQCRACEPHLSHGANPVIQA--HPNARLLIIGQAPGIKVHESSIPWNDASGERLR 62 Query: 138 KML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLF 192 + L ++ I + +P ++ + C + +++ P ++ L Sbjct: 63 EWLGIGSDTFYDEQKVAIVPMGFCYPGKGKSGDLPPRKECAELWHKKVLQSLPNIQMTLL 122 Query: 193 IGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248 IG +N++ KT + + W +P HP + + KKN W Sbjct: 123 IGQYAQNYYLKERTTKTLTETVKNWQAWAPEFLPLP-----HPSP--RNNIWLKKNPW 173 >gi|27364623|ref|NP_760151.1| Uracil-DNA glycosylase [Vibrio vulnificus CMCP6] gi|320155017|ref|YP_004187396.1| hypothetical protein VVM_00329 [Vibrio vulnificus MO6-24/O] gi|27360742|gb|AAO09678.1| Uracil-DNA glycosylase [Vibrio vulnificus CMCP6] gi|319930329|gb|ADV85193.1| hypothetical protein VVMO6_00171 [Vibrio vulnificus MO6-24/O] Length = 197 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 19/183 (10%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + +R+ C L + + A ++IIG P + + P++ +GN Sbjct: 3 LEPLLTQIRACQVCASALPLGANPVVQA--HSEAKILIIGQAPGTKVHHTSIPWNDASGN 60 Query: 135 MLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189 L L QI I + +P ++ + C P+ + P ++ Sbjct: 61 RLRVWLDIEKPTFYDPKQIAIMPMGFCYPGRGQSGDLPPRKECAPLWHEALLKHLPNIEL 120 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIK 244 L IG +N + +N + + + W + +P HP L + P + Sbjct: 121 TLLIGQYAQNRYLSNKPKTLTETVQNWQAWLPDYLPLP-----HPSPRNTLWLRKNPWFE 175 Query: 245 KNT 247 + T Sbjct: 176 EQT 178 >gi|319405735|emb|CBI79358.1| conserved hypothetical protein [Bartonella sp. AR 15-3] Length = 211 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 32/193 (16%), Positives = 63/193 (32%), Gaps = 18/193 (9%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTE------GQDLMIIGYTPSDSDNISG 125 Q+ + +L+ + S C L + + I G P + S Sbjct: 4 QQCDHIIKLEKDIHSCRVCIKHPHYLPPLPHEPRPVVYLSNTASIAIAGQAPGLRVHESF 63 Query: 126 KPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ- 181 PF+ ++G L L R+ I + P ++N S++ I + Sbjct: 64 IPFNDRSGVRLRNWLGVTSDEFYSRSLFAIVPMGFCFPGYDQNKSDLPPRSECKEIWHEK 123 Query: 182 --IELISPKILLFIGNKTKNF-FFNNDAQKTYQNLGKWSNLCT--PHSIIPTLATVHPQE 236 + K++L IG+ + N + + + W N+ + + HP Sbjct: 124 VFQAMPQIKLVLAIGSYAHKWHITNLQHKTVSETVSDWKNILSIRQPRGYNVMPLPHPSW 183 Query: 237 LIQYPLI-KKNTW 248 + KK+ W Sbjct: 184 --RNTFWFKKHPW 194 >gi|308063559|gb|ADO05446.1| hypothetical protein HPSAT_03540 [Helicobacter pylori Sat464] Length = 192 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 27/184 (14%), Positives = 59/184 (32%), Gaps = 13/184 (7%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 ++ + + + C S + L I TP + + ML+ Sbjct: 20 KQVYESIENCNLCKRHQNSK-PVIGLFNPTSKLTFITLTP--MLDSQLNFLNNLKAAMLE 76 Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++Q I + N E+ C + Q++ + K+++ G Sbjct: 77 SIIQKVFNCPLKDCSILSLLKC--DSNSLNLEEEINACLFHLTWQLDNSASKVIVVFGKI 134 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 N ++ G+ +L T H L+T +++++ P +KK + Sbjct: 135 LPQRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFKIALQ 187 Query: 257 ALKN 260 L Sbjct: 188 FLNQ 191 >gi|317177467|dbj|BAJ55256.1| hypothetical protein HPF16_0659 [Helicobacter pylori F16] Length = 206 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 27/184 (14%), Positives = 60/184 (32%), Gaps = 13/184 (7%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 ++ + + + C S + L I TP + + ML+ Sbjct: 34 KQVYEGIENCNLCKRHQNSK-PVIGLFNPTSKLTFITLTP--MLDSQLNFLNNLKAAMLE 90 Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++Q I + N E+ C + Q++ + K+++ G Sbjct: 91 SIIQKVFNYPLKDCSILSLLKC--DSNSLNLEEEINACLFHLTWQLDNSASKVIVVFGEI 148 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 N ++ G+ +L T H L+T +++++ P +KK + + Sbjct: 149 LPKRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFKIVLQ 201 Query: 257 ALKN 260 L Sbjct: 202 FLNQ 205 >gi|121602558|ref|YP_989136.1| hypothetical protein BARBAKC583_0849 [Bartonella bacilliformis KC583] gi|120614735|gb|ABM45336.1| conserved hypothetical protein [Bartonella bacilliformis KC583] Length = 211 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 65/186 (34%), Gaps = 21/186 (11%) Query: 72 QKACSLHELKSLLRSFHDC--------HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123 Q+ + +L + S C L + A ++ + I G P + Sbjct: 4 QRCDKIIKLDKKIHSCRICITNPRYYPPL-PHEPRPV-AYLSDTASIAIAGQAPGLRVHE 61 Query: 124 SGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSN-IEMEICRPIIM 179 S PF+ ++G L L ++ R+ I + P ++N S+ C+ + Sbjct: 62 SSIPFNDRSGETLRNWLSVTRNQFYDRSLFAIVPMGFCFPGYDQNKSDLPPRRECQEMWH 121 Query: 180 RQIELISP--KILLFIGNKTKNF-FFNNDAQKTYQNLGKWSNLCT--PHSIIPTLATVHP 234 ++ P K++L IG+ + + + + + W N+ + + HP Sbjct: 122 EEVFQAMPQIKLVLAIGSYAQKWHITGLKHKTVSETVSDWKNILSIRQPRGYNVIPLPHP 181 Query: 235 QELIQY 240 + Sbjct: 182 SW--RN 185 >gi|92117781|ref|YP_577510.1| uracil-DNA glycosylase superfamily protein [Nitrobacter hamburgensis X14] gi|91800675|gb|ABE63050.1| Uracil-DNA glycosylase superfamily [Nitrobacter hamburgensis X14] Length = 242 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 28/210 (13%), Positives = 54/210 (25%), Gaps = 42/210 (20%) Query: 57 RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLC----------STS-----LSTIC 101 + +A+ A + + DC LC + + Sbjct: 3 TTSRTDTQSRAEPALSGANT-----ASTEPGRDCPLCPRLVDYRLSVRAREPDWFNAPVP 57 Query: 102 ATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEI-------------M 146 + L+I+G P N +G+PF+G G++L L Sbjct: 58 SFGDPDAALLIVGLAPGVQGANRTGRPFTGDYAGDLLYATLLKYGFAAGHYQARVDDGLT 117 Query: 147 RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF---FN 203 IS PP N+ L + + + ++ +G + Sbjct: 118 LVDCRISNAVRCVPPQNKPLPAEINTCRAFLSATLAAMPKLRAIVALGRIAHDSVVKALG 177 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 A+ G + + H Sbjct: 178 LRAKAAPFAHGAVH----RAGAVRLYDSYH 203 >gi|85708087|ref|ZP_01039153.1| uracil-DNA glycosylase [Erythrobacter sp. NAP1] gi|85689621|gb|EAQ29624.1| uracil-DNA glycosylase [Erythrobacter sp. NAP1] Length = 194 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 25/198 (12%), Positives = 61/198 (30%), Gaps = 28/198 (14%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICA-----TQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 L + + C + + ++I+G P + SG P+ + Sbjct: 7 EALHREIAACTLC-----AKHLPLGPRPVVQFSPNSRILIVGQAPGTRVHASGIPWDDDS 61 Query: 133 GNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP-- 187 G+ L L + ++ + + +P + + C P +I + P Sbjct: 62 GDRLRGWLGLDKDAFYDPAKVALMPMGFCYPGKAKGGDAPPRKECAPAWHDRILALLPED 121 Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ-----YPL 242 ++ L +G + + + + + + P HP ++ P Sbjct: 122 RLTLLVGAYAQAAYLPATRKLSMTDR-----VKRGADFAPFFPLPHPAWRVRMWMAKNPW 176 Query: 243 IKKNTWHALITLKKALKN 260 + T L L++ + Sbjct: 177 FEAET---LPALRREIAA 191 >gi|328543521|ref|YP_004303630.1| Uracil DNA glycosylase superfamily [polymorphum gilvum SL003B-26A1] gi|326413265|gb|ADZ70328.1| Uracil DNA glycosylase superfamily [Polymorphum gilvum SL003B-26A1] Length = 222 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 23/197 (11%), Positives = 51/197 (25%), Gaps = 30/197 (15%) Query: 86 SFHDCHLCSTSLS------------TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT 132 C + + L+++G P N +G+PF+G Sbjct: 16 DCDRCPRLVAFRHEHQRAFPNWFNAPVPSFAAPDPRLLVVGLAPGLRGANRTGRPFTGDY 75 Query: 133 -GNMLDKMLQSIEIMRTQIH-------------ISMISPWHPPGNRNLSNIEMEICRPII 178 G++L + + R + I+ PP N+ + + + Sbjct: 76 AGDLLYETMLDFGFARGRYEARPDDGLELVGAAITNAVRCVPPANKPVGSEIANCRSFLF 135 Query: 179 MRQIELISPKILLFIGNKTKNFFFNN-DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237 + +L +G F + D ++ G + + H Sbjct: 136 ATLDAYPGLRAVLALGRIAHETFLSTLDIRRADFAFGHGRRHDLGTRSLVLFDSYHCS-- 193 Query: 238 IQYPLIKKNTWHALITL 254 + T + Sbjct: 194 RYNTNTGRLTREMFRAV 210 >gi|270290892|ref|ZP_06197116.1| conserved hypothetical protein [Pediococcus acidilactici 7_4] gi|270280952|gb|EFA26786.1| conserved hypothetical protein [Pediococcus acidilactici 7_4] Length = 195 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 21/167 (12%), Positives = 49/167 (29%), Gaps = 15/167 (8%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 ++I+G P + ++ K+G+ L + + P Sbjct: 32 NPQARILIVGQAPGKRVQDTEIIWNDKSGDRLRDWMGISRETFYNSGKIAVLPMDFYYPG 91 Query: 165 N-----LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + + + + ++ L IG ++ ++ + T L K Sbjct: 92 KGKSGDIPPRKAVAEKWHPQMVAAMPNIQLTLLIGAYSQRYYLKTTPKTTTTELVKNYQS 151 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALI-TLKKALKN 260 P VHP L + P ++ L + L++ Sbjct: 152 FLP----KYFPLVHPSPRNNIWLARNPWFEEQVVPDLKRRVAAILQD 194 >gi|167949186|ref|ZP_02536260.1| hypothetical protein Epers_22861 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 170 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 26/169 (15%), Positives = 47/169 (27%), Gaps = 19/169 (11%) Query: 109 DLMIIGYTPSDSDNISG-KPFSGKT-GNMLDKMLQSIEI-------------MRTQIHIS 153 L+++G P + +PF+G G +L + L I+ Sbjct: 1 RLLLVGLAPGMHGANASGRPFTGDHAGILLYQTLHRYGFASRAESVAADDDLQLFDCRIT 60 Query: 154 MISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQK-TYQN 212 PP N+ + L ++L +G N QK Sbjct: 61 NAVKCLPPQNKPQGVEINNCNHYLSQELASLEKGAVVLALGCIAHNAVLKASGQKLKAFA 120 Query: 213 LGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 G + P+ + L + H K+ T + + L Sbjct: 121 FGHAAEHRLPN-GLRLLDSYHCS--RYNTQTKRLTTAMFEQVFARAREL 166 >gi|308125690|ref|ZP_05776738.2| uracil DNA glycosylase superfamily [Vibrio parahaemolyticus K5030] gi|308115536|gb|EFO53076.1| uracil DNA glycosylase superfamily [Vibrio parahaemolyticus K5030] Length = 164 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 57/148 (38%), Gaps = 13/148 (8%) Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ---SIEIMRTQIHISMISPWHPPGN 163 ++IIG P + + P++ +G+ L + L + +I I + +P Sbjct: 7 NARILIIGQAPGTKVHSTSIPWNDPSGDRLRQWLDIDKDVFYDPNKIAIVPMGFCYPGKG 66 Query: 164 RNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221 + + C P ++I P ++ L IG ++ ++ N + Q + +W + Sbjct: 67 NSGDLPPRKECAPTWHKKILEQLPNIELTLLIGQFSQQYYLTNKPKTLTQTVQQWQDWEP 126 Query: 222 PHSIIPTLATVHPQELIQYPLI-KKNTW 248 + HP + L KKN W Sbjct: 127 EF-----IPLPHPSP--RNTLWLKKNPW 147 >gi|91977115|ref|YP_569774.1| uracil-DNA glycosylase superfamily protein [Rhodopseudomonas palustris BisB5] gi|91683571|gb|ABE39873.1| Uracil-DNA glycosylase superfamily [Rhodopseudomonas palustris BisB5] Length = 225 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 29/199 (14%), Positives = 54/199 (27%), Gaps = 22/199 (11%) Query: 51 QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 S + + D L + R L + + + + L Sbjct: 2 TATRGPLAAVSRPIAEPDRDCPDCPRLAAFRREQRLRE--PLWHNA--PVPSFGDDDATL 57 Query: 111 MIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEI-------------MRTQIHISMI 155 +I+G P N +G+PF+G G++L L + IS Sbjct: 58 LIVGLAPGLQGANRTGRPFTGDYAGDLLYATLIEYGFAKGNYEARPDDGLRLVRCRISNA 117 Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQ-NLG 214 PP N+ L R + + + L+ +G + + Q G Sbjct: 118 VRCVPPQNKPLPIEINTCRRFLATTIETMPKLRALVMLGRIAHDSTLKAVGLRASQAPFG 177 Query: 215 KWSNLCTPHSIIPTLATVH 233 + + H Sbjct: 178 --HGAVHQAGALRLYDSYH 194 >gi|254419101|ref|ZP_05032825.1| Uracil DNA glycosylase superfamily [Brevundimonas sp. BAL3] gi|196185278|gb|EDX80254.1| Uracil DNA glycosylase superfamily [Brevundimonas sp. BAL3] Length = 212 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 50/155 (32%), Gaps = 30/155 (19%) Query: 88 HDCHLC--------STSLS-------TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131 DC LC + + L++ G P + N +G+PF+G Sbjct: 9 RDCPLCPRLVEYRQENARQNPDWWNGPAPSFGDPNARLLVAGLAPGRTGANRTGRPFTGD 68 Query: 132 T-GNMLDKMLQSIEIMRTQ-------------IHISMISPWHPPGNRNLSNIEMEICRPI 177 G +L L+ + I+ PPGN+ L E + Sbjct: 69 HAGWLLYDTLKKAGFAQGHYDPNGDDDLTLVDCMITNAVRCAPPGNKPLPIEETTCRPFL 128 Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN 212 I R L + K+++ +G+ ++ + Sbjct: 129 IDRLALLPNLKVIVTLGDVSRRNILKAFGRPASAM 163 >gi|163850945|ref|YP_001638988.1| uracil-DNA glycosylase superfamily protein [Methylobacterium extorquens PA1] gi|163662550|gb|ABY29917.1| Uracil-DNA glycosylase superfamily [Methylobacterium extorquens PA1] Length = 232 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 25/186 (13%), Positives = 54/186 (29%), Gaps = 16/186 (8%) Query: 65 QQADSIAQKACSLHELKSLLRSFHDC--------HLCSTSLSTICATQTEGQDLMIIGYT 116 + +++ + + + LR+ C L + + L+I Sbjct: 16 PISAAMSAAPENFEDTAARLRACRLCRDAPLYGAPLPHEPRPVV--QGSATARLLIASQA 73 Query: 117 PSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHP---PGNRNLSNIE 170 P + + SG PFS +G L L ++ ++ I + P + Sbjct: 74 PGNRAHRSGIPFSDPSGRRLRDWLGLDEAAFYDPARVAILPMGACFPGLDAKGGDRPPRR 133 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230 L ++L IG + + + + +W + + L Sbjct: 134 ECAPAWRADLLAGLPQLDLILVIGQYAQAWHLGPRPGGLTETVARWRAILDASARPRVLP 193 Query: 231 TVHPQE 236 HP Sbjct: 194 LPHPSW 199 >gi|297624092|ref|YP_003705526.1| Uracil-DNA glycosylase superfamily [Truepera radiovictrix DSM 17093] gi|297165272|gb|ADI14983.1| Uracil-DNA glycosylase superfamily [Truepera radiovictrix DSM 17093] Length = 228 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 28/220 (12%), Positives = 57/220 (25%), Gaps = 45/220 (20%) Query: 82 SLLRSFHDCH------------------LCSTSLSTICATQTEGQDLMIIGYTPSDSD-N 122 L S C L + ++++G P N Sbjct: 10 EALLSCTRCPRLVAHREAVARVKRRAYRLEPYWGRPVPGFGDPEARIVLLGLAPGAHGSN 69 Query: 123 ISGKPFSGK-TGNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLSN 168 +G+ F+G +G L L + ++ + I+ + PP N+ Sbjct: 70 RTGRMFTGDGSGAFLYPALWRAGLANQPRAAHRDDGLVLRGVFITAAARCVPPDNKPTRE 129 Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ-------KTYQNLGKWSNLCT 221 + L + K+++ +G + ++ + G Sbjct: 130 ELQSCRGWLARDFAGLPNVKVVVALGRVAHESYLELISRGQRLVKARYGFAHGALHTFAG 189 Query: 222 PHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 P L H +Q + T + K L Sbjct: 190 AP---PLLDAYHVS--LQNTNTGRLTPEMFDAVLARAKEL 224 >gi|74316863|ref|YP_314603.1| hypothetical protein Tbd_0845 [Thiobacillus denitrificans ATCC 25259] gi|74056358|gb|AAZ96798.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC 25259] Length = 228 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 64/215 (29%), Gaps = 19/215 (8%) Query: 43 EKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICA 102 S S+ P P Q A A +L + + + C Sbjct: 2 RSSASSSNTPAEPHGTGTVPRGQSAAGGA-----FADLLARVAACTACAEHLPHPPRPVL 56 Query: 103 TQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH 159 + L+I+G P + +G P++ +G+ L L + ++I I + Sbjct: 57 RASPSARLLIVGQAPGRRVHATGIPWNDPSGDRLRDWLGLTRDAFYDASRIAIVPAGLCY 116 Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKI--LLFIGNKTKNFFFNNDAQKT-YQNLGKW 216 P C + PKI L IG + ++ + T + + W Sbjct: 117 PGTVGGSDLPPRAECASRWQPPLRAAMPKIGLTLLIGAYAQAYYLGRQRRTTLTETVEAW 176 Query: 217 SNLCTPHSIIPTLATVHPQELIQYPLI-KKNTWHA 250 +L HP + K++ W Sbjct: 177 RDLDPA-----LFPLPHPSP--RNRRWFKQHPWFD 204 >gi|317010871|gb|ADU84618.1| hypothetical protein HPSA_03075 [Helicobacter pylori SouthAfrica7] Length = 196 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 26/183 (14%), Positives = 59/183 (32%), Gaps = 13/183 (7%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 ++ + + + C S + + I TP + + ML+ Sbjct: 24 KQVHEGIENCNLCKRYQHSK-PVVGLLNAQSKITFITLTP--MLDSQLHFLNNLKALMLE 80 Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++Q I + N E+ C P + Q++ + K+++ G Sbjct: 81 SIIQKVFGYSLKDCTILSLLKC--DSNSLNLEEEINACLPHLTWQLDNSASKVIILFGEI 138 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 N + G+ +L T + L+T +++++ P +KK + Sbjct: 139 LLKRLLNLSK---EETFGRIVSLKTKN----FLSTYALEDMLKNPTLKKEALTHFKIALQ 191 Query: 257 ALK 259 L Sbjct: 192 FLN 194 >gi|291613958|ref|YP_003524115.1| uracil-DNA glycosylase superfamily [Sideroxydans lithotrophicus ES-1] gi|291584070|gb|ADE11728.1| Uracil-DNA glycosylase superfamily [Sideroxydans lithotrophicus ES-1] Length = 216 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 44/155 (28%), Gaps = 19/155 (12%) Query: 98 STICATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIE----------- 144 + + G L+I+G P N +G+PF+G G++L L Sbjct: 31 KPVPSFGDAGSPLLIVGLAPGMHGANRTGRPFTGDYAGDLLYSTLHKFGLATAAEPLDAN 90 Query: 145 ------IMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTK 198 + I+ PP N+ + ++ + +L +G Sbjct: 91 KQANPRLKLKSCRITNAVRCLPPQNKPEPAEVRQCNGYLVQELAAVPQGAAILALGTVAH 150 Query: 199 NFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 A K S + + + H Sbjct: 151 EAVLRACALKVKGYKFAHSARHELPNGLKLYDSYH 185 >gi|255264768|ref|ZP_05344110.1| uracil DNA glycosylase superfamily protein [Thalassiobium sp. R2A62] gi|255107103|gb|EET49777.1| uracil DNA glycosylase superfamily protein [Thalassiobium sp. R2A62] Length = 201 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 61/205 (29%), Gaps = 28/205 (13%) Query: 74 ACSLHELKSLLRSFHDCHLCSTSLST------ICATQTEGQDLMIIGYTPSDSDNISGKP 127 + + C T + G ++I G P + SG+P Sbjct: 5 PNTPETRFDAVAKCTYCADWFQKTHTGHPPRSVLWA-EPGARILIAGQAPGARVHASGRP 63 Query: 128 FSGKTGNMLDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMR 180 F+ +G+ L + + R++I I ++ P G+ E + Sbjct: 64 FTDPSGDRLRGWMDVDDATFYDRSKISIVPMAFCFPGYNEKGHDLPPPKECAKLWRAGIL 123 Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 + + L +G +++ +G W + HP + Sbjct: 124 EALGPF-DLTLLVGGYAQDWHIG--KGTVTARVGAWRDHAPH-----VFPLPHPSW--RT 173 Query: 241 PLI-KKNTW---HALITLKKALKNL 261 KKN W + L+ +K + Sbjct: 174 TGWVKKNPWFGGELIPELRMRIKEV 198 >gi|37681333|ref|NP_935942.1| uracil-DNA glycosylase [Vibrio vulnificus YJ016] gi|37200084|dbj|BAC95913.1| uracil-DNA glycosylase [Vibrio vulnificus YJ016] Length = 197 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 19/183 (10%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + +R+ C L + + A ++IIG P + + P++ +GN Sbjct: 3 LEPLLTQIRACQVCASALPLGANPVVQA--HSEAKILIIGQAPGTKVHHTSIPWNDASGN 60 Query: 135 MLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189 L L QI I + +P ++ + C P+ + P ++ Sbjct: 61 RLRAWLDIEKPTFYDPKQIAIMPMGFCYPGRGQSGDLPPRKECAPLWHEALLKHLPNIEL 120 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIK 244 L IG +N + +N + + + W + +P HP L + P + Sbjct: 121 TLLIGQYAQNRYLSNKPKTLTETVQNWQAWLPDYLPLP-----HPSPRNTLWLRKNPWFE 175 Query: 245 KNT 247 + T Sbjct: 176 EQT 178 >gi|295839515|ref|ZP_06826448.1| uracil-DNA glycosylase, family 4 [Streptomyces sp. SPB74] gi|295827517|gb|EFG65442.1| uracil-DNA glycosylase, family 4 [Streptomyces sp. SPB74] Length = 247 Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 27/206 (13%), Positives = 58/206 (28%), Gaps = 46/206 (22%) Query: 73 KACSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLMIIG 114 + +LH L + + S C + + L+++G Sbjct: 9 ASGALHALDTRIASCRACPRLVAWREEAARVKRAAFADEEYWARPVPGFGPQDARLLVLG 68 Query: 115 YTPSDS-DNISGKPFSG-KTGNMLDKMLQ-------------SIEIMRTQIHISMISPWH 159 P+ N +G+ F+G ++G++L + ++ Sbjct: 69 LAPAAHGGNRTGRMFTGDRSGDVLFHAFHGVGLANLAQPLAPGDGLRLLGTRVTAPVHCA 128 Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFF--------NNDAQKT 209 PP N + E + CR + ++ L+ P + ++ +G + Sbjct: 129 PPQN-KPTPRERDTCRHWLAEELALLRPTVRAVVILGAFGWQAALPAFAEAAWTVPRPRP 187 Query: 210 YQNLGKWSNLCTPHSIIP--TLATVH 233 G L P H Sbjct: 188 RFGHGAVVRLAAHDGGPPLDVFGCYH 213 >gi|333027905|ref|ZP_08455969.1| putative uracil-DNA glycosylase, family 4 [Streptomyces sp. Tu6071] gi|332747757|gb|EGJ78198.1| putative uracil-DNA glycosylase, family 4 [Streptomyces sp. Tu6071] Length = 248 Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 27/206 (13%), Positives = 55/206 (26%), Gaps = 46/206 (22%) Query: 73 KACSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLMIIG 114 LH L + + C + E L+++G Sbjct: 12 ADRKLHALDAEVTRCRACPRLVAWREEVGRVKRAAFADEEYWARPVPGFGPEDARLLVLG 71 Query: 115 YTPSDS-DNISGKPFSGKT-GNMLDKML-------------QSIEIMRTQIHISMISPWH 159 P+ N +G+ F+G G++L + L + ++ Sbjct: 72 LAPAAHGGNRTGRMFTGDRAGDVLFRALYDIGLASAPLPRAADDGLRLHGTRLTSPVHCA 131 Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNN--------DAQKT 209 PP + E + CR ++ ++ L+ P + ++ +G + Sbjct: 132 PP-ANKPTPQERDTCRHWLVEELTLLRPTVRAVVVLGAFGWQAALPAFAAAGWEVPRPRP 190 Query: 210 YQNLGKWSNLCTPHSIIP--TLATVH 233 G L P H Sbjct: 191 AFGHGARVRLPARDGGAPLDVFGCYH 216 >gi|311746466|ref|ZP_07720251.1| NLP/P60 family protein [Algoriphagus sp. PR1] gi|126575361|gb|EAZ79693.1| NLP/P60 family protein [Algoriphagus sp. PR1] Length = 194 Score = 55.1 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 49/163 (30%), Gaps = 13/163 (7%) Query: 80 LKSLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDK 138 L S R+ C + ++++G P +G P++ +G L + Sbjct: 7 LSSQARACLICAGKIPFEPKPVF-RIHPKSKILVVGQAPGTKVQNTGIPWNDPSGEELRR 65 Query: 139 ML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFI 193 L + I + +P + C P Q P K++L I Sbjct: 66 WLDVGREEFYNEEIFGILPMGFCYPGKGNSGDLPPRPECAPTWHPQFLKELPDLKLILLI 125 Query: 194 GNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 G + ++ + + + + + VHP Sbjct: 126 GQYAQRYYLNGERKSNLTETVKAFKDYLPQY-----FPLVHPS 163 >gi|86147875|ref|ZP_01066180.1| hypothetical protein MED222_00602 [Vibrio sp. MED222] gi|85834302|gb|EAQ52455.1| hypothetical protein MED222_00602 [Vibrio sp. MED222] Length = 197 Score = 55.1 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 65/178 (36%), Gaps = 18/178 (10%) Query: 80 LKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 L + +R C L + I A L+IIG P + S P++ +G L Sbjct: 5 LLTEIRQCTACEPHLSHGANPVIQA--HPNARLLIIGQAPGIKVHESSIPWNDASGERLR 62 Query: 138 KMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLF 192 + L+ ++ I + +P ++ + C + +++ P ++ L Sbjct: 63 EWLEMDSDTFYDEQKVAIVPMGFCYPGKGKSGDLPPRKECAALWHKKVLQSLPNIQMTLL 122 Query: 193 IGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248 IG +N++ A T + + W +P HP + + KKN W Sbjct: 123 IGQYAQNYYLKEKATSTLTETVRNWQAWAPEFLPLP-----HPSP--RNNIWLKKNPW 173 >gi|318056332|ref|ZP_07975055.1| hypothetical protein SSA3_00200 [Streptomyces sp. SA3_actG] gi|318079983|ref|ZP_07987315.1| hypothetical protein SSA3_25683 [Streptomyces sp. SA3_actF] Length = 248 Score = 55.1 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 27/202 (13%), Positives = 55/202 (27%), Gaps = 46/202 (22%) Query: 77 LHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLMIIGYTPS 118 LH L + + C + E L+++G P+ Sbjct: 16 LHALDAEVTRCRACPRLVAWREEVGRVKRAAFADEEYWARPVPGFGPEDARLLVLGLAPA 75 Query: 119 DS-DNISGKPFSGKT-GNMLDKML-------------QSIEIMRTQIHISMISPWHPPGN 163 N +G+ F+G G++L + L + ++ PP Sbjct: 76 AHGGNRTGRMFTGDRAGDVLFRALYDIGLASAPLPRAADDGLRLHGTRLTSPVHCAPP-A 134 Query: 164 RNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNN--------DAQKTYQNL 213 + E + CR ++ ++ L+ P + ++ +G + Sbjct: 135 NKPTPQERDTCRHWLVEELTLLRPTVRAVVVLGAFGWQAALPAFAAAGWEVPRPRPAFGH 194 Query: 214 GKWSNLCTPHSIIP--TLATVH 233 G L P H Sbjct: 195 GARVRLPARDGGAPLDVFGCYH 216 >gi|148259543|ref|YP_001233670.1| uracil-DNA glycosylase superfamily protein [Acidiphilium cryptum JF-5] gi|326402749|ref|YP_004282830.1| uracil-DNA glycosylase [Acidiphilium multivorum AIU301] gi|146401224|gb|ABQ29751.1| Uracil-DNA glycosylase superfamily [Acidiphilium cryptum JF-5] gi|325049610|dbj|BAJ79948.1| uracil-DNA glycosylase [Acidiphilium multivorum AIU301] Length = 211 Score = 55.1 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 28/180 (15%), Positives = 46/180 (25%), Gaps = 30/180 (16%) Query: 88 HDCHLC------STSLS---------TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131 DC LC + + E L+++G P N +G+PF+G Sbjct: 7 RDCALCPRLSGFRAANHAKFPGWFNAPVPCFGPENARLLVVGLAPGLRGANRTGRPFTGD 66 Query: 132 T-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177 G++L L + I PP NR L + Sbjct: 67 FAGHLLYATLIKYGLAIGVYAERPDDGLELRDCRIINAVRCVPPENRPLPAEIAACNGFL 126 Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237 + + +L +G K + I + H L Sbjct: 127 ARDIAAMTQLRGILALGGIAHQATLRAFGLKQSHAKFSHGAMTELPGGIVLADSFHVSRL 186 >gi|192291343|ref|YP_001991948.1| uracil-DNA glycosylase superfamily [Rhodopseudomonas palustris TIE-1] gi|192285092|gb|ACF01473.1| Uracil-DNA glycosylase superfamily [Rhodopseudomonas palustris TIE-1] Length = 224 Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 50/179 (27%), Gaps = 37/179 (20%) Query: 88 HDCHLC--------STSLS-------TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131 DC LC + + L+I+G P N +G+PF+G Sbjct: 21 RDCPLCPRLAEFRSEARAREPGWFNAPVPSFGGADASLLIVGLAPGLQGANRTGRPFTGD 80 Query: 132 T-GNMLDKMLQSIEIMRTQ-------------IHISMISPWHPPGNRNLSNIEMEICRPI 177 G++L L R IS PP N+ L R + Sbjct: 81 YAGDLLYATLIDYGFARGHYQARPDDGLQLTDCRISNAVRCVPPQNKPLPIEINTCRRFL 140 Query: 178 IMRQIELISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 I + + ++ +G + A + G + + + H Sbjct: 141 IATIEAMPKLRAIVLLGRIAHDSTLKALGLRAAQAPFGHGAVHDA----GRLRLYDSYH 195 >gi|315500449|ref|YP_004089252.1| uracil-DNA glycosylase superfamily [Asticcacaulis excentricus CB 48] gi|315418461|gb|ADU15101.1| Uracil-DNA glycosylase superfamily [Asticcacaulis excentricus CB 48] Length = 192 Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 59/197 (29%), Gaps = 32/197 (16%) Query: 84 LRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ- 141 + + C + T ++IIG P ++SG P+ +G L +Q Sbjct: 7 IAACRVCEAHLPLGPRPVLRTADPAARVLIIGQAPGTKVHVSGIPWDDASGQRLRDWMQV 66 Query: 142 --SIEIMRTQIHISMISPWHP-------PGNRNLSNIEMEICRPIIMRQIELISPKILLF 192 +++ I + +P G + + L + ++ L Sbjct: 67 TPDAFYDQSRFAILPMGLCYPGRAVTSKGGGGDNPPRPECAPLWHARVRKTLPNIQLTLL 126 Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNT 247 IG + ++ N+ T + VHP L + P Sbjct: 127 IGAYAQGYYLNDCLSLTERVR-------QADQYGAFFPLVHPSPRNRLWLSRNP------ 173 Query: 248 WHA---LITLKKALKNL 261 W L L+ L+ L Sbjct: 174 WFDAEILSRLRARLRGL 190 >gi|83854714|ref|ZP_00948244.1| uracil-DNA glycosylase, putative [Sulfitobacter sp. NAS-14.1] gi|83842557|gb|EAP81724.1| uracil-DNA glycosylase, putative [Sulfitobacter sp. NAS-14.1] Length = 231 Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 27/225 (12%), Positives = 67/225 (29%), Gaps = 29/225 (12%) Query: 56 IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL------STICATQTEGQD 109 ++H + + ++ ++ +++ L C + + + G Sbjct: 16 VKHHRVTAPFETGAPPLRSTTMTDIRPELSQCTLCSDRFAATATGHRPNPVVWF-QPGAR 74 Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNL 166 L+I P + + PF +G L L ++ R+++ I ++ P + Sbjct: 75 LLIASQAPGLKVHEANTPFWDASGKRLRDWLGVDETTFYDRSRVAIIPMAFCFPGYDAKG 134 Query: 167 ---SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH 223 + + ++ + IG + + + W N Sbjct: 135 SDLPPPPICAKTWRAGALDTVPDIRLTVLIGAYAMRYHL-PGFTTVTRAVADWQNHPKG- 192 Query: 224 SIIPTLATVHPQELIQYPLI-KKNTW--HALI-----TLKKALKN 260 A HP + KKN W ++ ++ L + Sbjct: 193 ----VFALPHPSW--RNTGWLKKNPWFEEDVLPRLRAAVRNVLDD 231 >gi|262273293|ref|ZP_06051108.1| uracil-DNA glycosylase [Grimontia hollisae CIP 101886] gi|262222666|gb|EEY73976.1| uracil-DNA glycosylase [Grimontia hollisae CIP 101886] Length = 194 Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 37/199 (18%), Positives = 69/199 (34%), Gaps = 22/199 (11%) Query: 75 CSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 L L +R + C HL + A L+IIG P + +G P++ + Sbjct: 4 KPLALLLDRVRDCNHCRAHLPLGPRPVVQA--APSARLLIIGQAPGTRVHKTGIPWNDPS 61 Query: 133 GNMLDKMLQSIE---IMRTQIHISMISPWH----PPGNRNLSNIEMEICRPIIMRQIELI 185 G+ L + LQ + Q+ I + + G+ + P+I Q+ I Sbjct: 62 GDRLREWLQMEKETFYNPEQVAIMPMGFCYPGRGHSGDLPPRPECAPMWHPLITAQLPDI 121 Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK 245 L IG+ + ++ + + + + +A HP ++K Sbjct: 122 QL--TLLIGDYAQRYYLKDKPKTLTETVKANVCWSPEF-----IALPHPSP-RNNLWLRK 173 Query: 246 NTWHA---LITLKKALKNL 261 N W L L+ + L Sbjct: 174 NPWFDAEILPMLRNRIDQL 192 >gi|209884967|ref|YP_002288824.1| uracil-DNA glycosylase superfamily [Oligotropha carboxidovorans OM5] gi|209873163|gb|ACI92959.1| uracil-DNA glycosylase superfamily [Oligotropha carboxidovorans OM5] Length = 243 Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 53/198 (26%), Gaps = 31/198 (15%) Query: 66 QADSIAQKACSLHELKSLLRSFHDCHLC--------STS-------LSTICATQTEGQDL 110 A + S L HDC LC + + + Sbjct: 18 AGRRTASRRASSPSLSDTSHPGHDCPLCPRLVEFREANRAAHPDWFNGPVPPLGGRDAAV 77 Query: 111 MIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEI-------------MRTQIHISMI 155 +I+G P N +G+PF+G G++L L I Sbjct: 78 LIVGLAPGLQGANRTGRPFTGDYAGDLLYATLLEFGFASGRYEARPDDTLKLVDCRIGNA 137 Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK 215 PP N+ + ++ ++ K ++ +G + + K Sbjct: 138 VHCVPPQNKPTPAEINTCRQFLVSTIKDMPRLKAIVTLGRISHDSTLKALGLPLRAAPFK 197 Query: 216 WSNLCTPHSIIPTLATVH 233 H + ++ H Sbjct: 198 -HGGEFQHGALRVFSSYH 214 >gi|159043141|ref|YP_001531935.1| uracil-DNA glycosylase superfamily [Dinoroseobacter shibae DFL 12] gi|157910901|gb|ABV92334.1| uracil-DNA glycosylase superfamily [Dinoroseobacter shibae DFL 12] Length = 202 Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 58/201 (28%), Gaps = 27/201 (13%) Query: 79 ELKSLLRSFHDCHLC------STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 L L + C + + ++I P + + +PF+ + Sbjct: 5 ALAKDLAACTLCASRFATTASAHRPRPVVWF-RPTARVLIASQAPGMRAHKAARPFTDPS 63 Query: 133 GNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSN-IEMEICRPIIMRQIELISPK 188 G L L + + I + P + S+ IC I P+ Sbjct: 64 GVRLRAWLGVNEDTFYDKNLFAIVPMGFCFPGYDAKGSDLPPPRICAQTWRAPILAGLPQ 123 Query: 189 I--LLFIGNKTKNFFFNNDAQK-TYQNLGKWSNLCTPHSIIPTLATVHP-----QELIQY 240 I L IG + + +A+ + + +W + HP L + Sbjct: 124 IALTLLIGGYAQKWHLGPEARAGVTETVRRWRDYAPD-----VFPLPHPSWRNTAWLNRN 178 Query: 241 PLIKKNTWHALITLKKALKNL 261 P + L L+ L + Sbjct: 179 PWFEAEC---LPALRARLGEV 196 >gi|153009686|ref|YP_001370901.1| hypothetical protein Oant_2358 [Ochrobactrum anthropi ATCC 49188] gi|151561574|gb|ABS15072.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188] Length = 210 Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 27/193 (13%), Positives = 59/193 (30%), Gaps = 21/193 (10%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII---------GYTPSDSDNISGKP 127 + +L L S C +C + E + I+ G P + + P Sbjct: 1 MEKLDELSHSIRACRICRDTPQFPPPLPHEPNPVCIVSDTARIAICGQAPGIRVHNTSLP 60 Query: 128 FSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRN--LSNIEMEICRPIIMRQI 182 F+ +G+ L + L + ++ I + P +++ E + R Sbjct: 61 FNDPSGDRLRQWLGVSREEFYDPSRFAIVPMGFCFPGYDKHGGDLPPRRECRQTWHDRVF 120 Query: 183 -ELISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNL--CTPHSIIPTLATVHPQELI 238 + + +L +G + + + + + W + L HP Sbjct: 121 AAMPQLEFILVVGQYALAYHLPDYRGRNLTETVRNWRYFLETPNPAGRIALPLPHPSW-- 178 Query: 239 QYPLI-KKNTWHA 250 + K+N W Sbjct: 179 RNSGWLKRNPWFD 191 >gi|332533031|ref|ZP_08408901.1| putative uracil-DNA glycosylase family protein [Pseudoalteromonas haloplanktis ANT/505] gi|332037510|gb|EGI73963.1| putative uracil-DNA glycosylase family protein [Pseudoalteromonas haloplanktis ANT/505] Length = 193 Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 61/179 (34%), Gaps = 18/179 (10%) Query: 79 ELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 +L + C L + I ++I G P + +G PF+ +GN L Sbjct: 5 QLIEQVSKCVICEPHLPLGARPVI--QFNPNARILIAGQAPGIKVHETGVPFNDASGNRL 62 Query: 137 DKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILL 191 + L + I I + +P ++ + C P Q+ P ++ + Sbjct: 63 REWLGLTRDEFYDANNIAILPMGFCYPGRGKSGDLPPRKECAPAWREQLLAALPNIELTI 122 Query: 192 FIGNKTKNFFFNNDAQKTYQNLGK-WSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248 +G + + + L K W + ++P HP + + KKN W Sbjct: 123 VLGKYAQAYHLPETKKMPLTELVKSWREYWPNYLVLP-----HPSP--RNNIWLKKNPW 174 >gi|240850667|ref|YP_002972067.1| putative uracil-DNA glycosylase protein [Bartonella grahamii as4aup] gi|240267790|gb|ACS51378.1| putative uracil-DNA glycosylase protein [Bartonella grahamii as4aup] Length = 209 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 24/189 (12%), Positives = 59/189 (31%), Gaps = 21/189 (11%) Query: 72 QKACSLHELKSLLRSFHDC--------HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123 ++ + +L+ + S C L + + + I G P + Sbjct: 2 KRCNQIIKLEKKIYSCRVCIQQPHYFPPL-PHEPNPVVYLSDT-ASIAIAGQAPGLRVHE 59 Query: 124 SGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180 + PF+ ++G L L + ++ I + P + N +++ I Sbjct: 60 TSIPFNDRSGKRLRDWLGVTKEEFYNKSLFAIVPMGFCFPGYDNNKADLPPRRECREIWH 119 Query: 181 Q---IELISPKILLFIGNKTKNFFFNN-DAQKTYQNLGKWSNL--CTPHSIIPTLATVHP 234 + + K++L IG+ + + + + W N+ + + HP Sbjct: 120 EKIFQAMPQIKLVLAIGSYAQKWHITELKHKTVSATVSDWRNILSISQPQGYNVMPLPHP 179 Query: 235 QELIQYPLI 243 + Sbjct: 180 SW--RNTSW 186 >gi|83748542|ref|ZP_00945562.1| Uracil DNA glycosylase superfamily protein [Ralstonia solanacearum UW551] gi|207743322|ref|YP_002259714.1| uracil-dna glycosylase protein [Ralstonia solanacearum IPO1609] gi|83724750|gb|EAP71908.1| Uracil DNA glycosylase superfamily protein [Ralstonia solanacearum UW551] gi|206594719|emb|CAQ61646.1| uracil-dna glycosylase protein [Ralstonia solanacearum IPO1609] Length = 206 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 28/178 (15%), Positives = 54/178 (30%), Gaps = 16/178 (8%) Query: 84 LRSFHDCHLCSTS-----LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDK 138 L C LC+ + + A ++I+G P + +G P++ ++G+ L + Sbjct: 17 LHDVRACRLCAGALPQEPRPIVMAD--RRARVLIVGQAPGRIVHETGIPWNDRSGDRLRQ 74 Query: 139 MLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFI 193 LQ +I + + P + C P R + P K+ L + Sbjct: 75 WLQIGYDDFYADKRIAVVPMGFCFPGTGPSGDLPPRPECAPQWHRPLLTAMPELKLALLV 134 Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTWHA 250 G + ++ + HP + K N W Sbjct: 135 GGYAQRYYLDV-PPGWSLTDVVRHGPVRDAEGRVLFPLPHPSP--RNLAWFKHNPWFD 189 >gi|117621213|ref|YP_858181.1| uracil-DNA glycosylase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562620|gb|ABK39568.1| uracil-DNA glycosylase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 193 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 63/181 (34%), Gaps = 14/181 (7%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L +R+ C +E L+IIG P + SG P+ +G+ Sbjct: 2 NRLDSLFEQIRACRLCEAHLPLGPRPVIRGSERARLLIIGQAPGTRVHASGIPWDDPSGD 61 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNR--NLSNIEMEICRPIIMRQIELISPKI 189 L + L ++ ++I I + +P + +L + L + ++ Sbjct: 62 RLRQWLGVDKATFYDESRIAIMPMGLCYPGKGKSGDLPPRPECAPTWHDKVLMLLPNIEL 121 Query: 190 LLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247 L IG + ++ + + + W++ +P HP + KKN Sbjct: 122 TLLIGQYAQAYYLRDAAKGSLTETVRSWADYGPAWLPLP-----HPSP--RNTFWLKKNL 174 Query: 248 W 248 W Sbjct: 175 W 175 >gi|291529488|emb|CBK95074.1| Uracil-DNA glycosylase [Eubacterium rectale M104/1] Length = 185 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 57/165 (34%), Gaps = 9/165 (5%) Query: 82 SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT--GNMLDKM 139 + + C C I D+MIIG + P +T G ++D Sbjct: 3 RKMIECNKCQECLNQK--ILLDFQNNADIMIIGLSARIKKYEDEIPLDSRTRSGKIIDAF 60 Query: 140 LQSIEIMRTQIHISMISPWHPPGNRN----LSNIEMEICRPIIMRQIELISPKILLFIGN 195 + ++ + + P + ++ E+ C + +I I+PK+++ +GN Sbjct: 61 ENIAQKHCMSVYRTNLVKCAPIDSEKRLRYPNDKEINACFEKLTDEINNIAPKLIILLGN 120 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 + F N + + + I ++ HP + + Sbjct: 121 IVRESFQTNFNINICKPKENSLQVV-KWNNINIISIYHPSYIKRS 164 >gi|315124458|ref|YP_004066462.1| hypothetical protein ICDCCJ07001_928 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315018180|gb|ADT66273.1| hypothetical protein ICDCCJ07001_928 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 150 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 55/153 (35%), Gaps = 10/153 (6%) Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML-QSIEIMRTQIHISMISPWHPPGNRN 165 L+I+ S+N SG + K G L + + Q + + + S + G + Sbjct: 7 NAKLLILDVFGQKSENESGILLNSKKGEKLKRYIYQILGLCDEDFYFSYLFKCFCNGKFD 66 Query: 166 LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI 225 + ++ C P +++LI P LL +G T + + G+ Sbjct: 67 DFS--LQSCLPFFWNELKLIQPAFLLCLGEYTFKSL---GFKDYHILKGEVFAY----KN 117 Query: 226 IPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 + + + + P +KN L +K L Sbjct: 118 FFIMPSYDLDFIEKNPSYEKNFIQDLKKIKGFL 150 >gi|229521016|ref|ZP_04410437.1| uracil-DNA glycosylase [Vibrio cholerae TM 11079-80] gi|229341901|gb|EEO06902.1| uracil-DNA glycosylase [Vibrio cholerae TM 11079-80] Length = 180 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 58/166 (34%), Gaps = 14/166 (8%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + +R C L + + + ++IIG P + + P + +G Sbjct: 2 LESLLTEIRQCTVCEPHLPLGA-NPVI-RAHPAAKILIIGQAPGTKVHQTSIPRNDASGE 59 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189 L + L + I I + +P R+ + C P+ ++ P ++ Sbjct: 60 RLRQWLGLDREAFYCEENIAIMPMGLCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQL 119 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 L IG ++++ ++ + + +W L HP Sbjct: 120 TLLIGQYAQHYYLSDKPSTLTETVQQWQRWAPS-----VLPLPHPS 160 >gi|217977185|ref|YP_002361332.1| Uracil-DNA glycosylase superfamily [Methylocella silvestris BL2] gi|217502561|gb|ACK49970.1| Uracil-DNA glycosylase superfamily [Methylocella silvestris BL2] Length = 228 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 30/202 (14%), Positives = 56/202 (27%), Gaps = 25/202 (12%) Query: 52 PITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLM 111 + + V + L L+ LR S + + ++ Sbjct: 2 ALDRSAAAVALRVLEPPIDCPLCPRLAALRRSLREEQ--PGWSNA--PVPTFGDPSAPVL 57 Query: 112 IIGYTPSDSD-NISGKPFSGKT-GNMLDKML-------------QSIEIMRTQIHISMIS 156 I+G P N +G+PF+G G++L L + + IS Sbjct: 58 IVGLAPGLRGANRTGRPFTGDYAGDLLYSTLLAYGFATGVYGASRDDGLRLRDCAISNAV 117 Query: 157 PWHPPGNRNLSNIEMEICRPIIMRQIELI-SPKILLFIGNKTKNFF---FNNDAQKTYQN 212 PP N + E+ CR + +E +++ +G Sbjct: 118 RCVPPQN-KPTPEEIATCRSFLKATLERSAHLSVVVALGRIAHESILRALGAKLSAFPFA 176 Query: 213 LGKWSNLC-TPHSIIPTLATVH 233 G L + + H Sbjct: 177 HGAEHKLPRANGRDLALFDSYH 198 >gi|239787552|emb|CAX84021.1| Uracil-DNA glycosylase superfamily [uncultured bacterium] Length = 218 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 25/178 (14%), Positives = 49/178 (27%), Gaps = 25/178 (14%) Query: 74 ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT 132 L + R + + + + L+I+G P N +G+PF+G Sbjct: 16 CPRLAAFRDAARVS--FPGWHNA--PVPSFGSLDARLLIVGLAPGLRGANRTGRPFTGDF 71 Query: 133 -GNMLDKMLQSIEIMRT-------------QIHISMISPWHPPGNRNLSNIEMEICRPII 178 G++L L + R I+ PP N+ + Sbjct: 72 AGDLLYATLLRFGLARGSYGASPEDGLELLDCRITNAVRCVPPENKPTGPEVTACRPFLA 131 Query: 179 MRQIELISPKILLFIGNKTKNFF---FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 + + K++L +G + G L + + H Sbjct: 132 GEILAMGKLKVVLALGALSHGAVLAALGEKKSAHAFAHGARHVL---GRGLILADSYH 186 >gi|326319269|ref|YP_004236941.1| Uracil-DNA glycosylase superfamily [Acidovorax avenae subsp. avenae ATCC 19860] gi|323376105|gb|ADX48374.1| Uracil-DNA glycosylase superfamily [Acidovorax avenae subsp. avenae ATCC 19860] Length = 267 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 40/130 (30%), Gaps = 13/130 (10%) Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI 169 +++G + S P SG G +LD ML+++ + R G Sbjct: 122 WLVVGESLSPDA-----PLSGDAGKLLDNMLRAMRLHRHPRTHFSAVERADAGTAEGPG- 175 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 + I + P ++L +G + + L P + Sbjct: 176 ---NAAGSLQAAIATLRPAMVLVLGLPAARAVLGSREPL-GRLRATTHQLP---DGTPAV 228 Query: 230 ATVHPQELIQ 239 T P L++ Sbjct: 229 VTYDPAYLLR 238 >gi|94313480|ref|YP_586689.1| uracil-DNA glycosylase superfamily [Cupriavidus metallidurans CH34] gi|93357332|gb|ABF11420.1| uracil-DNA glycosylase superfamily [Cupriavidus metallidurans CH34] Length = 201 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 63/178 (35%), Gaps = 14/178 (7%) Query: 67 ADSIAQKACSL-HELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123 A Q+A ++ L+ + S C L + + + ++IIG P + Sbjct: 2 ATKSPQRAQAIVTSLRRDIASCTRCAADLPAGPRPVV--QFSATSRILIIGQAPGSRVHA 59 Query: 124 SGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180 SG PF +G+ L + + +++ I + +P + C P+ Sbjct: 60 SGIPFDDPSGDRLREWTGLSHDVFYDASRVAIMPMGFCYPGKGPSGDLPPRRECAPLWHD 119 Query: 181 QIELISP--KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236 I + P ++ L +G+ + ++ + T + + P+ HP Sbjct: 120 AILRLLPEDRLTLLVGSYAQAYYLQGEVGATMTEIVRDFRRFGPN----LFPLPHPSW 173 >gi|297379850|gb|ADI34737.1| Hypothetical protein HPV225_0658 [Helicobacter pylori v225d] Length = 209 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 60/184 (32%), Gaps = 13/184 (7%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 ++ + + + C S + L I TP + + ML+ Sbjct: 37 KQVYEGIENCNLCKRHQNSK-PVIGLFNPTSKLTFITLTP--MLDSQLNFLNNLKAAMLE 93 Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++Q I + N E+ C + Q++ + K+++ G Sbjct: 94 SIIQKVFNCPLKDCSILSLLKC--DSNSLNLEEEINACLFHLTWQLDNSASKVIVVFGEI 151 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 N ++ G+ +L T H L+T +++++ P +KK T + Sbjct: 152 LPQRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFKTALQ 204 Query: 257 ALKN 260 L Sbjct: 205 FLNQ 208 >gi|300691683|ref|YP_003752678.1| uracil-dna glycosylase protein [Ralstonia solanacearum PSI07] gi|299078743|emb|CBJ51403.1| uracil-dna glycosylase protein [Ralstonia solanacearum PSI07] Length = 206 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 57/175 (32%), Gaps = 13/175 (7%) Query: 84 LRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 +R+ C L + A ++I+G P + +G P++ ++G+ L + L+ Sbjct: 20 VRACRLCTGVLPQAPRPIVMAD--RRARVLIVGQAPGRIVHETGIPWNDRSGDRLRQWLR 77 Query: 142 ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNK 196 +I + + P N C P R + P K+ L +G Sbjct: 78 IGYDDFYADKRIAVVPMGFCFPGTGPNGDLPPRPECAPQWHRPLLTAMPDLKLALLVGGY 137 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTWHA 250 + ++ + + ++ + HP + K N W Sbjct: 138 AQRYYLDVPRGGSLTDVVR-HGPVQDAEGRVLFPLPHPSP--RNLAWFKHNPWFD 189 >gi|121595680|ref|YP_987576.1| uracil-DNA glycosylase superfamily protein [Acidovorax sp. JS42] gi|120607760|gb|ABM43500.1| Uracil-DNA glycosylase superfamily [Acidovorax sp. JS42] Length = 221 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 61/208 (29%), Gaps = 13/208 (6%) Query: 48 SAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC-HLCSTSLSTICATQTE 106 A P + P ++ L EL +R+ C + Sbjct: 1 MAKPPRNELPGHALPRNGLPRDDTRRDEPLDELLRRVRACTICAPYLPLGPRPVL-QADA 59 Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGN 163 L+I+G P + SG PF +G L L + ++ I + +P Sbjct: 60 RARLLIVGQAPGRKVHASGIPFDDASGERLRTWLGLTRETFYDPARVAIVPMGFCYPGRG 119 Query: 164 RNLSNIEMEICRPIIMRQIELISPKI--LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221 + C P + P I + +G + Q LG+ Sbjct: 120 ASGDAPPRPECAPAWRVPLLARLPNIALTVAVGQYALAWHLA---ACRGQPLGETVRGTC 176 Query: 222 PHSIIPTLATVHPQELIQYPLI-KKNTW 248 S P LA HP + K++ W Sbjct: 177 TLSDAPVLALPHPSP--RNNGWLKRHPW 202 >gi|240138076|ref|YP_002962548.1| hypothetical protein MexAM1_META1p1409 [Methylobacterium extorquens AM1] gi|240008045|gb|ACS39271.1| conserved hypothetical protein [Methylobacterium extorquens AM1] Length = 212 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 25/181 (13%), Positives = 51/181 (28%), Gaps = 16/181 (8%) Query: 70 IAQKACSLHELKSLLRSFHDC--------HLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121 ++ + + LR+ C L + + L+I P + Sbjct: 1 MSAAPENFEATAARLRACRLCRDAPLYGAPLPHEPRPVV--QGSATARLLIASQAPGNRA 58 Query: 122 NISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHP---PGNRNLSNIEMEICR 175 + SG PFS +G L L ++ ++ I + P + Sbjct: 59 HRSGIPFSDPSGRRLRDWLGLDEAAFYDPRRVAILPMGACFPGLDAKGGDRPPRRECAPT 118 Query: 176 PIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 L ++L IG + + + + +W + + L HP Sbjct: 119 WRADLLAGLPQLDLILVIGQYAQAWHLGPRPGGLTETVARWRTILDASARPRVLPLPHPS 178 Query: 236 E 236 Sbjct: 179 W 179 >gi|260770641|ref|ZP_05879572.1| uracil-DNA glycosylase [Vibrio furnissii CIP 102972] gi|260614367|gb|EEX39555.1| uracil-DNA glycosylase [Vibrio furnissii CIP 102972] Length = 190 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 65/179 (36%), Gaps = 18/179 (10%) Query: 80 LKSLLRSFHDCHLCSTS----LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 L LLR C +C + + + E ++IIG P + S P++ +G+ Sbjct: 2 LHDLLRDIRQCRVCEPALPLGANPVI-QAHEAARILIIGQAPGIRVHQSSVPWNDPSGDR 60 Query: 136 LDKMLQ---SIEIMRTQIHISMISPWHPPGNR--NLSNIEMEICRPIIMRQIELISPKIL 190 L + L QI I + +P + +L +L + ++ Sbjct: 61 LRRWLDIDKETFYDPKQIAIMPMGLCYPGKGKSGDLPPRRECAPLWHQSVLAQLPNIQMT 120 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248 L IG +N++ + + + +W + +P HP + L KKN W Sbjct: 121 LLIGQYAQNYYLKDKPATLTETVRQWQRWAPHYLPLP-----HPSP--RNTLWLKKNPW 172 >gi|163793036|ref|ZP_02187012.1| Uracil-DNA glycosylase superfamily protein [alpha proteobacterium BAL199] gi|159181682|gb|EDP66194.1| Uracil-DNA glycosylase superfamily protein [alpha proteobacterium BAL199] Length = 196 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 48/150 (32%), Gaps = 15/150 (10%) Query: 99 TICATQTEGQDLMIIGYTPS-DSDNISGKPFSGKT-GNMLDKMLQSIEIMR--------- 147 + + T L+I+G P N +G+PF+G G++L L R Sbjct: 18 PVPSFGTADARLLIVGMAPGLKGANRTGRPFTGDFAGDLLYATLIRHGFARGTYDRRSDD 77 Query: 148 ----TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 T I+ PP N+ + + E+ + +++L +G+ Sbjct: 78 GLALTDCRITNAVRCVPPQNKPVGAEVNACRPFLTATMAEMPALQVILVLGSLAHGATLA 137 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 K + +++ H Sbjct: 138 ALGLKKSAHKFGHGAKAVLPDGRALISSYH 167 >gi|332185463|ref|ZP_08387211.1| uracil DNA glycosylase superfamily protein [Sphingomonas sp. S17] gi|332014441|gb|EGI56498.1| uracil DNA glycosylase superfamily protein [Sphingomonas sp. S17] Length = 223 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 27/208 (12%), Positives = 59/208 (28%), Gaps = 30/208 (14%) Query: 42 KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTIC 101 + S + P+ I+ + L E++ + + + + + Sbjct: 2 PDASFPAIPAPLAPIQPPRDCPL---------CPRLVEVRHAVAA--EYPTWWNA--PVY 48 Query: 102 ATQTEGQDLMIIGYTPSDSDNI-SGKPFSGK-TGNMLDKMLQSIEIMRTQIH-------- 151 L ++G P +G+PF+G G +L L + Q Sbjct: 49 PFGDGEAWLAVVGLAPGKHGAHRTGRPFTGDGAGPLLYGTLAKFGLAEGQFDARIDDGLT 108 Query: 152 -----ISMISPWHPPGNRNLSNIEMEICRPIIMRQIEL-ISPKILLFIGNKTKNFFFNND 205 I PP N + E+ CR + +++ K+++ +G Sbjct: 109 LTGAVILNAVKCLPPEN-KPTPDEIRTCRSFLEQELAALPRLKVVVALGQIAHQSVVKAL 167 Query: 206 AQKTYQNLGKWSNLCTPHSIIPTLATVH 233 + + L + H Sbjct: 168 GGRLPKARFAHLAEHRMPGGPVVLDSYH 195 >gi|261838110|gb|ACX97876.1| hypothetical protein KHP_0671 [Helicobacter pylori 51] gi|261839523|gb|ACX99288.1| hypothetical protein HPKB_0694 [Helicobacter pylori 52] Length = 209 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 27/184 (14%), Positives = 59/184 (32%), Gaps = 13/184 (7%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 ++ + + + C S + L I TP + + ML+ Sbjct: 37 KQVYEGIENCNLCKRHQNSK-PVIGLFNPTSKLTFITLTP--MLDSQLNFLNNLKAAMLE 93 Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++Q I + N E+ C + Q++ + K+++ G Sbjct: 94 SIIQKVFNCPLKDCSILSLLKC--DSNSLNLEEEINACLFHLTWQLDNSASKVIVVFGEI 151 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 N ++ G+ +L T H L+T +++++ P +KK + Sbjct: 152 LPKRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFKIALQ 204 Query: 257 ALKN 260 L Sbjct: 205 FLNQ 208 >gi|15645274|ref|NP_207444.1| hypothetical protein HP0650 [Helicobacter pylori 26695] gi|2313777|gb|AAD07718.1| predicted coding region HP0650 [Helicobacter pylori 26695] Length = 196 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 27/184 (14%), Positives = 59/184 (32%), Gaps = 13/184 (7%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 ++ + + + C S + L I TP + + ML+ Sbjct: 24 KQVYEGIENCNLCKRHQNSK-PVIGLFNPTSKLTFITLTP--MLDSQLNFLNNLKAAMLE 80 Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++Q I + N E+ C + Q++ + K+++ G Sbjct: 81 SIIQKVFNCPLKDCSILSLLKC--DSNSLNLEEEINACLFHLTWQLDNSASKVIVVFGEI 138 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 N ++ G+ +L T H L+T +++++ P +KK + Sbjct: 139 LPKRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFKIALQ 191 Query: 257 ALKN 260 L Sbjct: 192 FLNQ 195 >gi|315178413|gb|ADT85327.1| uracil-DNA glycosylase [Vibrio furnissii NCTC 11218] Length = 190 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 65/179 (36%), Gaps = 18/179 (10%) Query: 80 LKSLLRSFHDCHLCSTS----LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 L LLR C +C + + + E ++IIG P + S P++ +G+ Sbjct: 2 LHDLLRDIRQCRVCEPALPLGANPVI-QAHEAARILIIGQAPGIRVHQSSIPWNDPSGDR 60 Query: 136 LDKMLQ---SIEIMRTQIHISMISPWHPPGNR--NLSNIEMEICRPIIMRQIELISPKIL 190 L + L QI I + +P + +L +L + ++ Sbjct: 61 LRRWLDIDKETFYDPKQIAIMPMGLCYPGKGKSGDLPPRRECAPLWHQSVLAQLPNIQMT 120 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248 L IG +N++ + + + +W + +P HP + L KKN W Sbjct: 121 LLIGQYAQNYYLKDKPATLTETVRQWQRWAPHYLPLP-----HPSP--RNTLWLKKNPW 172 >gi|116492091|ref|YP_803826.1| Uracil-DNA glycosylase [Pediococcus pentosaceus ATCC 25745] gi|116102241|gb|ABJ67384.1| Uracil-DNA glycosylase [Pediococcus pentosaceus ATCC 25745] Length = 194 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 18/161 (11%), Positives = 46/161 (28%), Gaps = 16/161 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 ++I+G P + ++ ++G+ L + + P Sbjct: 32 NPQAKILIVGQAPGKKVQDTEIMWNDQSGDRLRAWMGISRDTFYNSGDIAVIPMDFYYPG 91 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN-NDAQKTYQNLGKWSN 218 + + + + ++ L IG+ + + N + T + + N Sbjct: 92 KAKSGDVPPRKEVAEKWHQKMLDIMPNIQLTLLIGSYAQKHYLNVPRSTTTTNLVQNYRN 151 Query: 219 LCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITL 254 + VHP L + P ++ L + Sbjct: 152 FLPEY-----FPLVHPSPRNNIWLAKNPWFEQEVVPELQKI 187 >gi|217031974|ref|ZP_03437475.1| hypothetical protein HPB128_187g1 [Helicobacter pylori B128] gi|298736347|ref|YP_003728873.1| hypothetical protein HPB8_852 [Helicobacter pylori B8] gi|216946284|gb|EEC24890.1| hypothetical protein HPB128_187g1 [Helicobacter pylori B128] gi|298355537|emb|CBI66409.1| conserved hypothetical protein [Helicobacter pylori B8] Length = 196 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 27/184 (14%), Positives = 59/184 (32%), Gaps = 13/184 (7%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 ++ + + + C S + L I TP + + ML+ Sbjct: 24 KQVHEGIENCNLCKRHQHSK-PVIGIFNPTSKLAFITLTP--MLDSQLHFLNNLKAAMLE 80 Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++Q I + N E+ C + Q++ + K+++ G Sbjct: 81 SIIQKVFNYPLKDCSILSLLKC--DSNSLNLEEEINACLFHLTWQLDNSASKVIVVFGEI 138 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 N ++ G+ +L T H L+T +++++ P +KK + Sbjct: 139 LPKRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFKIALQ 191 Query: 257 ALKN 260 L Sbjct: 192 FLNQ 195 >gi|121596228|ref|YP_988124.1| phage SPO1 DNA polymerase-like protein [Acidovorax sp. JS42] gi|120608308|gb|ABM44048.1| phage SPO1 DNA polymerase-related protein [Acidovorax sp. JS42] Length = 258 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 51/142 (35%), Gaps = 15/142 (10%) Query: 98 STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP 157 + G +++ +P+ ++ P +G +G +LD ML+++ + R Sbjct: 107 QAVPPE--LGAGWLVVLESPTPAE-----PLAGDSGRLLDNMLRAMRLHRHPRTFVATLN 159 Query: 158 WHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS 217 H PG E + + ++ + P ++L +G + + Sbjct: 160 RHAPG----LTAEGLEPAAGLQQALQTLRPSLVLVLGLGAARVVLGSREPL-GRLRATAH 214 Query: 218 NLCTPHSIIPTLATVHPQELIQ 239 +L P + + P L++ Sbjct: 215 HLP---DGTPAVVSYDPAYLLR 233 >gi|163756115|ref|ZP_02163231.1| hypothetical protein KAOT1_09626 [Kordia algicida OT-1] gi|161323989|gb|EDP95322.1| hypothetical protein KAOT1_09626 [Kordia algicida OT-1] Length = 191 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 70/201 (34%), Gaps = 29/201 (14%) Query: 77 LHELKSLLRSFHDC----HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 + L + S C L ++ + A E +++IG P + +G P++ + Sbjct: 1 MENLLEEILSCTICKDFLPL---GVNPVLAA-HESSKIILIGQAPGLKVHQNGIPWNDMS 56 Query: 133 GNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ--IELISP 187 G L + L I I + + +P + + C +Q ++ Sbjct: 57 GKRLRQWLNVSDEIFYDAKNIALIPMGFCYPGKGTSGDLPPRKECAAAWHKQLLTKMQEA 116 Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII--PTLATVHPQ-----ELIQY 240 +++L +G + ++ ++A+K + + + HP L + Sbjct: 117 ELILLVGQYAQKYYLKDEAKK------TLTETVSNYESYLPKFFPLPHPSPRNRFWLRKN 170 Query: 241 PLIKKNTWHALITLKKALKNL 261 P +K + L+ + L Sbjct: 171 PWFEKEV---IPKLQDKVNRL 188 >gi|119774340|ref|YP_927080.1| hypothetical protein Sama_1203 [Shewanella amazonensis SB2B] gi|119766840|gb|ABL99410.1| conserved hypothetical protein [Shewanella amazonensis SB2B] Length = 197 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 28/191 (14%), Positives = 60/191 (31%), Gaps = 28/191 (14%) Query: 75 CSLHELKSLLRSFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 +L L +R C L + A ++I G P + + G+PF +G Sbjct: 2 QTLAALLQEVRGCQLCAGLPLGPKPILQAESD--AKILIAGQAPGANTHEKGRPFDDASG 59 Query: 134 NMLDKML---QSIEIMRTQIHISMISPW---------HPPGNRNLSNIEMEICRPIIMRQ 181 + L L ++ + I + G++ R ++ Sbjct: 60 DRLRHWLGVDKACFYDPGRFAILPMGFCFPGAIIRHGRRQGDKPPRPECAPAWRKQLLSH 119 Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----E 236 + + ++ L +G ++ T + ++ T + L HP Sbjct: 120 LP--NVELTLLLGTYALDWHLPEHRGLTLEA----TDWQTHWPKLLVLP--HPSPRNGLW 171 Query: 237 LIQYPLIKKNT 247 L ++P + N Sbjct: 172 LKRHPEFEANV 182 >gi|83941237|ref|ZP_00953699.1| uracil-DNA glycosylase, putative [Sulfitobacter sp. EE-36] gi|83847057|gb|EAP84932.1| uracil-DNA glycosylase, putative [Sulfitobacter sp. EE-36] Length = 231 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 31/225 (13%), Positives = 67/225 (29%), Gaps = 27/225 (12%) Query: 53 ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL------STICATQTE 106 I + +P A + + +++ L C + + + Sbjct: 15 IAERHRVTAPFETGAPPLRSTPMT--DIRPELSQCTLCADRFAATATGHRPNPVVWF-QP 71 Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGN 163 G L+I P + + PF +G L L ++ R ++ I ++ P + Sbjct: 72 GARLLIASQAPGLKVHEANTPFWDASGKRLRDWLGVDETTFYDRNRVAIIPMAFCFPGYD 131 Query: 164 RNL---SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220 + + ++ + IG + + + W N Sbjct: 132 AKGSDLPPPPICAKTWRARALDTVPDVRLTVLIGAYAMRYHL-PGFTTVTRAVADWQNHP 190 Query: 221 TPHSIIPTLATVHPQELIQYPLI-KKNTW--HALI-TLKKALKNL 261 A HP + KKN W ++ L+ A++N+ Sbjct: 191 KG-----VFALPHPSW--RNTGWLKKNPWFEEDVLPRLRAAVRNV 228 >gi|317178987|dbj|BAJ56775.1| hypothetical protein HPF30_0678 [Helicobacter pylori F30] Length = 209 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 27/184 (14%), Positives = 59/184 (32%), Gaps = 13/184 (7%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 ++ + + + C S + L I TP + + ML+ Sbjct: 37 KQVYEGIENCNLCKRHQNSK-PVIGLFNPTSKLTFITLTP--MLDSQSNFLNNLKAAMLE 93 Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++Q I + N E+ C + Q++ + K+++ G Sbjct: 94 SIIQKVFNYPLKDCSILSLLKC--DSNSLNLEEEINACLFHLTWQLDNSASKVIVVFGEI 151 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 N ++ G+ +L T H L+T +++++ P +KK + Sbjct: 152 LPKRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFKIALQ 204 Query: 257 ALKN 260 L Sbjct: 205 FLNQ 208 >gi|298291612|ref|YP_003693551.1| uracil-DNA glycosylase superfamily [Starkeya novella DSM 506] gi|296928123|gb|ADH88932.1| Uracil-DNA glycosylase superfamily [Starkeya novella DSM 506] Length = 226 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 27/239 (11%), Positives = 60/239 (25%), Gaps = 50/239 (20%) Query: 54 TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113 + +P+ + + L + R+ + + + L+I+ Sbjct: 6 AAVFEPPAPVEAEPERDCPFCPRLVAFREHWRAAE--PDWHNA--PVPSFGPVDGRLLIV 61 Query: 114 GYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEI-------------MRTQIHISMISPW 158 G P N +G+PF+G G +L L ++ Sbjct: 62 GLAPGLRGANRTGRPFTGDYAGELLYSTLIKFGFATGVFEARSDDSLKLADSRLTNAVRC 121 Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF---NNDAQKTYQNLGK 215 PP N+ ++ + L S ++ +G + + G Sbjct: 122 VPPENKPTTDEMRNCRPFLAATIGLLPSLSAIVALGKIAHDQVLAAHGEKLSRYKFAHGA 181 Query: 216 WSNL-------------CTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 L ++ + T H ++ L +L Sbjct: 182 VHRLGEVVLFDSYHCSRYNTNTGVLTTPMFH---------------AVFAKVRAHLDSL 225 >gi|114570129|ref|YP_756809.1| uracil-DNA glycosylase superfamily protein [Maricaulis maris MCS10] gi|114340591|gb|ABI65871.1| Uracil-DNA glycosylase superfamily [Maricaulis maris MCS10] Length = 220 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 26/188 (13%), Positives = 56/188 (29%), Gaps = 22/188 (11%) Query: 64 VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD-N 122 +A L + + H + + + ++ L+IIG P N Sbjct: 6 PPEAPLDCPLCPRLVAFREAVAVDH--PDWHNA--PVESFGSDQARLLIIGLAPGLRGAN 61 Query: 123 ISGKPFSGK-TGNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSN 168 +G+PF+G G++L L R I+ PP N+ + Sbjct: 62 RTGRPFTGDWAGDLLYATLDRFGFSRGTYASHAGDGVELVDAMITNAVRCVPPENKPVGA 121 Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSNLCTPHSI 225 + R + +L +G + + + +++ P+ Sbjct: 122 EANACRPFLTSRIAAMPRLTAVLCLGKISHDNTLRALGLPLKTVKFGHAATADIPGPNGS 181 Query: 226 IPTLATVH 233 + + H Sbjct: 182 LRLFDSYH 189 >gi|256027347|ref|ZP_05441181.1| DNA polymerase [Fusobacterium sp. D11] gi|289765315|ref|ZP_06524693.1| DNA polymerase [Fusobacterium sp. D11] gi|289716870|gb|EFD80882.1| DNA polymerase [Fusobacterium sp. D11] Length = 195 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 69/190 (36%), Gaps = 12/190 (6%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 +LK S + L D++ IG P K +G L Sbjct: 8 WEDLKFEAGSIGNELLPKDRQEVYIGMGDRNADVLFIGNDPKLYLAEDYKVEPQSSGAFL 67 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++L +E + +I+ +S +N + E + ++ QI LISPKI++F+G + Sbjct: 68 IRLLDVVEYLPETYYITTLSK-REIKIKNFNEEERKKLIDLLFMQILLISPKIVVFLGKE 126 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIKK-----NTWH 249 N GK+ I T T + +I + KK N ++ Sbjct: 127 VAQ-LVENKEIDFDTERGKFKKWRGD---IETYLTYDVETVIKARNDSGKKAVVALNFFN 182 Query: 250 ALITLKKALK 259 + +K+ L Sbjct: 183 DIKNVKERLN 192 >gi|237744562|ref|ZP_04575043.1| DNA polymerase [Fusobacterium sp. 7_1] gi|260494441|ref|ZP_05814571.1| DNA polymerase [Fusobacterium sp. 3_1_33] gi|229431791|gb|EEO42003.1| DNA polymerase [Fusobacterium sp. 7_1] gi|260197603|gb|EEW95120.1| DNA polymerase [Fusobacterium sp. 3_1_33] Length = 195 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 69/190 (36%), Gaps = 12/190 (6%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 +LK S + L D++ IG P K +G L Sbjct: 8 WEDLKFEAGSIGNELLPKDRQEVYIGMGDRNADVLFIGNDPKLYLAEDYKVEPQSSGAFL 67 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++L +E + +I+ +S +N + E + ++ QI LISPKI++F+G + Sbjct: 68 IRLLDVVEYLPETYYITTLSK-REIKIKNFNEEERKKLIDLLFMQILLISPKIVVFLGKE 126 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIKK-----NTWH 249 N GK+ I T T + +I + KK N ++ Sbjct: 127 VAQ-LVENKEIDFDTERGKFKKWRGD---IETYLTYDVETVIKARNDSGKKAVVALNFFN 182 Query: 250 ALITLKKALK 259 + +K+ L Sbjct: 183 DIKNVKERLN 192 >gi|254560637|ref|YP_003067732.1| hypothetical protein METDI2180 [Methylobacterium extorquens DM4] gi|254267915|emb|CAX23781.1| conserved hypothetical protein [Methylobacterium extorquens DM4] Length = 212 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 25/181 (13%), Positives = 51/181 (28%), Gaps = 16/181 (8%) Query: 70 IAQKACSLHELKSLLRSFHDC--------HLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121 ++ + + LR+ C L + + L+I P + Sbjct: 1 MSAAPENFEATAARLRACRLCRDAPLYGAPLPHEPRPVV--QGSATARLLIASQAPGNRA 58 Query: 122 NISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHP---PGNRNLSNIEMEICR 175 + SG PFS +G L L ++ ++ I + P + Sbjct: 59 HRSGIPFSDPSGRRLRAWLGLDEAAFYDPARVAILPMGACFPGLDAKGGDRPPRRECAPT 118 Query: 176 PIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 L ++L IG + + + + +W + + L HP Sbjct: 119 WRADLLAGLPQLDLILVIGQYAQAWHLGPRPGGLTETVARWRTIRDASARPRVLPLPHPS 178 Query: 236 E 236 Sbjct: 179 W 179 >gi|217034759|ref|ZP_03440157.1| hypothetical protein HP9810_861g1 [Helicobacter pylori 98-10] gi|216942703|gb|EEC22264.1| hypothetical protein HP9810_861g1 [Helicobacter pylori 98-10] Length = 196 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 27/184 (14%), Positives = 59/184 (32%), Gaps = 13/184 (7%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 ++ + + + C S + L I TP + + ML+ Sbjct: 24 KQVYEGIENCNLCKRHQNSK-PVIGLFNPTSKLTFITLTP--MLDSQLNFLNNLKAVMLE 80 Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++Q I + N E+ C + Q++ + K+++ G Sbjct: 81 SIIQKVFNCPLKDCSILSLLKC--DSNSLNLEEEINACLFHLTWQLDNSASKVIVVFGEI 138 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 N ++ G+ +L T H L+T +++++ P +KK + Sbjct: 139 LPKRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFKIALQ 191 Query: 257 ALKN 260 L Sbjct: 192 FLNQ 195 >gi|121602333|ref|YP_988782.1| uracil DNA glycosylase family protein [Bartonella bacilliformis KC583] gi|120614510|gb|ABM45111.1| uracil DNA glycosylase family protein [Bartonella bacilliformis KC583] Length = 228 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 46/163 (28%), Gaps = 24/163 (14%) Query: 91 HLCSTS--LSTICATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEI- 145 L + L+I+G P N +G+PF+G G +L L+ Sbjct: 40 PLWHNAPVSPFFPYKGPATTRLLIVGLAPGLRGANRTGRPFTGDYAGQLLYSTLKKFGFA 99 Query: 146 ------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193 I PP N+ S L K ++ + Sbjct: 100 QGVFEERPDDSLKLIDAAIVNSVRCVPPQNKPSSIEINTCRYFFAPLLKNLPKLKAVITL 159 Query: 194 GNKTKNF---FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 G+ N +A GK +N+ + ++ H Sbjct: 160 GSIAHLSTIRALNANASAHPFGHGKINNI----GKLRIFSSYH 198 >gi|330719196|ref|ZP_08313796.1| uracil DNA glycosylase superfamily protein [Leuconostoc fallax KCTC 3537] Length = 202 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 20/158 (12%), Positives = 60/158 (37%), Gaps = 17/158 (10%) Query: 99 TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMI 155 I + + ++I+G P +G ++ +G+ L + + + I +I + + Sbjct: 23 PIFSV-NKAARILIVGQAPGKKVQETGIMWNDASGDRLREWMGIDRDIFYESGEIAVIPM 81 Query: 156 SPWHPPGNRNL--SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL 213 ++P ++ + + ++ + ++ + IG + ++ + A+ Sbjct: 82 DFYYPGKAKSGDMPPRKGVAEKWHTRLLAQMPNLQLTILIGAYAQKYYLHLTAKD----- 136 Query: 214 GKWSNLCTPHSII--PTLATVHPQELIQYPLI-KKNTW 248 K +++ + VHP + + K+N W Sbjct: 137 -KITDIVANYQAYLPQYFPIVHPSP--RNNIWLKRNAW 171 >gi|134293731|ref|YP_001117467.1| uracil-DNA glycosylase superfamily protein [Burkholderia vietnamiensis G4] gi|134136888|gb|ABO58002.1| Uracil-DNA glycosylase superfamily [Burkholderia vietnamiensis G4] Length = 214 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 56/188 (29%), Gaps = 26/188 (13%) Query: 76 SLHELKSLLRSFHDC----HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 SL L + + + C L + ++I+G P + SG P+ Sbjct: 8 SLDVLLTEIHACRTCEAELPLGP---RPVL-RAHRDARVLIVGQAPGARVHASGIPWDDA 63 Query: 132 TGNMLDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIEL 184 +G L L T+ I + +P G+ + ++ ++ Sbjct: 64 SGKRLRDWLGVDADTFYDETRFAIVPMGFCYPGRGASGDNPPRPECAALWLDRLLAELPS 123 Query: 185 ISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI 243 I ++ L IG + F + + W + L HP + Sbjct: 124 I--RLTLLIGQYAQRHFLRDARKATLTDTVQAWRDYGPG-----VLPLPHPSP--RNQGW 174 Query: 244 -KKNTWHA 250 K + W Sbjct: 175 FKHHPWFD 182 >gi|49475577|ref|YP_033618.1| hypothetical protein BH08120 [Bartonella henselae str. Houston-1] gi|49238384|emb|CAF27611.1| hypothetical protein BH08120 [Bartonella henselae str. Houston-1] Length = 211 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 28/189 (14%), Positives = 58/189 (30%), Gaps = 21/189 (11%) Query: 72 QKACSLHELKSLLRSFHDC--------HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123 Q + +L+ + S C L + + I G P + Sbjct: 4 QPDNQITKLEKKIYSCRVCIKYPRYLPPL-PHEPKPVVYLSNRAL-IAIAGQAPGLRVHE 61 Query: 124 SGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180 S PF+ ++G L L + R+ I + P ++N S++ I Sbjct: 62 SSIPFNDRSGERLRNWLDVTRDEFYNRSLFAIVPMGFCFPGYDQNKSDLPPRRECQEIWH 121 Query: 181 Q---IELISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCT--PHSIIPTLATVHP 234 + + K++L IG+ + + + + W N+ + + HP Sbjct: 122 EKVFQAMPQIKLVLAIGSYAQKWHIAKLKHKTVSATVSDWKNILSIRQPRGYNVMPLPHP 181 Query: 235 QELIQYPLI 243 + Sbjct: 182 SW--RNTSW 188 >gi|317009334|gb|ADU79914.1| hypothetical protein HPIN_03390 [Helicobacter pylori India7] Length = 192 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 59/184 (32%), Gaps = 13/184 (7%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 ++ + + + C S + L I TP + + ML+ Sbjct: 20 KQVHEGIENCNLCKRHQHSK-PVIGLFNPTSKLAFITLTP--MLDSQLNFLNNLKAAMLE 76 Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++Q I + N E+ C + Q++ + KI++ G Sbjct: 77 SIIQKVFNCPLKDCSILSLLKC--DSNSLNLEEEINACLFHLTWQLDNSASKIIVVFGEI 134 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 N ++ G+ +L T H L+T +++++ P +KK + Sbjct: 135 LPKRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFKIALQ 187 Query: 257 ALKN 260 L Sbjct: 188 FLNQ 191 >gi|308061980|gb|ADO03868.1| hypothetical protein HPCU_03530 [Helicobacter pylori Cuz20] Length = 209 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 27/184 (14%), Positives = 60/184 (32%), Gaps = 13/184 (7%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 ++ + + + C S + L I TP + + ML+ Sbjct: 37 KQVYEGIENCNLCKRHQNSK-PVIGLFNPTSKLTFITLTP--MLDSQLNFLNNLKAAMLE 93 Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++Q + + N E+ C + Q++ + K+++ G Sbjct: 94 SIIQKVFNCPLKDCSVLSLLKC--DSNSLNLEEEINACLFHLTWQLDNSASKVIVVFGEI 151 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 N ++ G+ +L T H L+T +++++ P +KK T + Sbjct: 152 LPQRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFKTALQ 204 Query: 257 ALKN 260 L Sbjct: 205 FLNQ 208 >gi|325287709|ref|YP_004263499.1| Uracil-DNA glycosylase superfamily [Cellulophaga lytica DSM 7489] gi|324323163|gb|ADY30628.1| Uracil-DNA glycosylase superfamily [Cellulophaga lytica DSM 7489] Length = 190 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 65/167 (38%), Gaps = 15/167 (8%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 + EL S ++ C L + A + ++I+G P + +G P++ K+G Sbjct: 1 MQELLSEIKKCTVCSAKLALGPRPIVSA--SAKSKIVIVGQAPGSIVHNTGIPWNDKSGE 58 Query: 135 MLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIEL--ISPKI 189 L + ++ I + +P ++ + C P+ +QI + ++ Sbjct: 59 NLRNWMGISTEDFYNTDKVAIIPMGFCYPGMGKSGDLPPTKECAPLWHKQILNGIKNVRL 118 Query: 190 LLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQ 235 L IG ++++ N A+KT Q + + + + HP Sbjct: 119 TLLIGAYAQSYYLGNKAEKTLTQTVKNYHTYLPNY-----MVLPHPS 160 >gi|88813712|ref|ZP_01128938.1| hypothetical protein NB231_01569 [Nitrococcus mobilis Nb-231] gi|88789031|gb|EAR20172.1| hypothetical protein NB231_01569 [Nitrococcus mobilis Nb-231] Length = 224 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 26/178 (14%), Positives = 46/178 (25%), Gaps = 33/178 (18%) Query: 86 SFHDCH-----LCSTSL-------STICATQTEGQDLMIIGYTPSDSDNI-SGKPFSGKT 132 C L T + A L+++G P +G+PF+G Sbjct: 18 DCTACPRLASFLRETRALYPAYYARPVPAFGPLDARLLVVGLAPGKHGANATGRPFTGDY 77 Query: 133 -GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPII 178 G +L + L ++ PP N+ ++ R + Sbjct: 78 AGILLYQTLFDTGFSNQARADRPDDGLELYDCRVTNAVRCLPPANKPSASEVNNCSRFLG 137 Query: 179 MRQIELISPKILLFIGNKTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 S I+L +G + G L + L + H Sbjct: 138 YDLAATPSGGIVLALGRIAHEAVVRCEGYRLRDYPFAHGARHRLSRRRT---LLDSYH 192 >gi|330828236|ref|YP_004391188.1| Uracil-DNA glycosylase superfamily [Aeromonas veronii B565] gi|328803372|gb|AEB48571.1| Uracil-DNA glycosylase superfamily [Aeromonas veronii B565] Length = 195 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 59/178 (33%), Gaps = 16/178 (8%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 + +L +R+ C E L+IIG P + SG P+ +G+ Sbjct: 2 QRIDKLFEQIRACRLCEAHLPLGPRPVIRGAESARLLIIGQAPGTRVHASGIPWDDPSGD 61 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHP--PGNRNLSNIEMEICRPIIMRQIELISPKI 189 L + L ++ ++I I + +P + +L + L + ++ Sbjct: 62 RLRQWLGVDKATFYDESRIAIMPMGLCYPGRGKSGDLPPRPECAPTWHDKVLMLLPNIEL 121 Query: 190 LLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYP 241 L IG + ++ + W++ +P HP L + P Sbjct: 122 TLLIGQYAQAYYLRGAAKGSLTDTVRSWADYGPGWLPLP-----HPSPRNTLWLRKNP 174 >gi|319404293|emb|CBI77886.1| conserved hypothetical protein [Bartonella rochalimae ATCC BAA-1498] Length = 211 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 30/193 (15%), Positives = 60/193 (31%), Gaps = 18/193 (9%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTE------GQDLMIIGYTPSDSDNISG 125 ++ + +L+ + S C L + + I G P + S Sbjct: 4 KQCEHIIKLEKDIHSCRVCIKHPHYLPPLPHEPRPVVYLSNTASIAIAGQAPGLRVHESL 63 Query: 126 KPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ- 181 PF+ +G L L R+ I + P N S++ I + Sbjct: 64 IPFNDCSGVRLRNWLGVTSDEFYNRSLFAIVPMGFCFPGYAPNKSDLPPRNECQEIWHEK 123 Query: 182 --IELISPKILLFIGNKTKNF-FFNNDAQKTYQNLGKWSNLCT--PHSIIPTLATVHPQE 236 + K++L +G+ + N + + + W N+ + + HP Sbjct: 124 VFQAMPQIKLVLAVGSYAHKWHITNLKYKTVSETVSDWKNILSIRQPRGYNVMPLPHPSW 183 Query: 237 LIQYPLI-KKNTW 248 + KK+ W Sbjct: 184 --RNTFWLKKHPW 194 >gi|317181963|dbj|BAJ59747.1| hypothetical protein HPF57_0673 [Helicobacter pylori F57] Length = 209 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 27/184 (14%), Positives = 59/184 (32%), Gaps = 13/184 (7%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 ++ + + + C S + L I TP + + ML+ Sbjct: 37 KQVYEGIENCNLCKRHQNSK-PVIGLFNPTSKLTFITLTP--MLDGQLNFLNNLKAAMLE 93 Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++Q I + N E+ C + Q++ + K+++ G Sbjct: 94 SIIQKVFNYPLKDCSILSLLKC--DSNSLNLEEEINACLFHLTWQLDNSASKVIVVFGEI 151 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 N ++ G+ +L T H L+T +++++ P +KK + Sbjct: 152 LPKHLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFKIAFQ 204 Query: 257 ALKN 260 L Sbjct: 205 FLNQ 208 >gi|254419732|ref|ZP_05033456.1| Uracil DNA glycosylase superfamily [Brevundimonas sp. BAL3] gi|196185909|gb|EDX80885.1| Uracil DNA glycosylase superfamily [Brevundimonas sp. BAL3] Length = 202 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 61/186 (32%), Gaps = 20/186 (10%) Query: 76 SLHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 L + S +R+ C L T + L+I G P + SG PF+ +G Sbjct: 4 DLDAVLSDIRACRACAGVLPHTPRPVV--RVFPETRLLICGQAPGRRVHESGLPFNDPSG 61 Query: 134 NMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNI-EMEICRPIIMRQIELISPKI 189 + L + +I ++ + +P + C + Q+ P++ Sbjct: 62 DRLRDWMGVDYDSFYADRRIGVAAQAFCYPGTAPKGGDHPPPSRCADLWRPQLLDALPQM 121 Query: 190 --LLFIGNKTKNFFFNND-AQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KK 245 L +G + + + + + + W + LA HP + +K Sbjct: 122 ELTLLVGGYAQAWALSERAKRNMTETVRAWRDYAPD-----ILALPHPSW--RNTAWLRK 174 Query: 246 NTW-HA 250 N W Sbjct: 175 NPWFED 180 >gi|119470680|ref|ZP_01613348.1| putative uracil-DNA glycosylase family protein [Alteromonadales bacterium TW-7] gi|119446150|gb|EAW27428.1| putative uracil-DNA glycosylase family protein [Alteromonadales bacterium TW-7] Length = 196 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 67/194 (34%), Gaps = 21/194 (10%) Query: 80 LKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 L + C L + I ++I G P + +GKPF+ +GN L Sbjct: 6 LIEQVSKCVICEPHLPLGARPVI--QFNANARILIAGQAPGIKVHETGKPFNDASGNRLR 63 Query: 138 KMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLF 192 + L I I + +P ++ + C P Q+ P ++ + Sbjct: 64 EWLGLSVDEFYDPQTIAILPMGFCYPGKGKSGDLPPRKECAPAWRAQLLAALPNLELTIV 123 Query: 193 IGNKTKNFFFNNDAQKTYQNLGK-WSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW-- 248 +G + + + + L K W H ++P HP + + KKN W Sbjct: 124 LGKYAQAYHLPHTKNRPLTELVKSWREYWPEHLVLP-----HPSP--RNNIWLKKNPWFA 176 Query: 249 HALI-TLKKALKNL 261 ++ L + + + Sbjct: 177 EDVLPELAERVAAI 190 >gi|15611662|ref|NP_223313.1| hypothetical protein jhp0595 [Helicobacter pylori J99] gi|4155138|gb|AAD06168.1| putative [Helicobacter pylori J99] Length = 209 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 61/184 (33%), Gaps = 13/184 (7%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 ++ + + + C S I L I TP + + ML+ Sbjct: 37 KQVHEGIENCNLCKRHQHSK-PITGLFNPTSKLAFITLTP--MLDSQLHFLNNLKAAMLE 93 Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++Q I + N E+ C P + Q++ +PK+++ G Sbjct: 94 SIIQKVFNYPLKDCSILSLLKC--DSNSLNLEEEINACLPHLTWQLDNSAPKVIIVFGEV 151 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 N ++ G+ +L T H L+T +++++ P +KK + Sbjct: 152 LPKRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFKIALQ 204 Query: 257 ALKN 260 L Sbjct: 205 FLNQ 208 >gi|239994750|ref|ZP_04715274.1| uracil-DNA glycosylase [Alteromonas macleodii ATCC 27126] Length = 192 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 52/174 (29%), Gaps = 20/174 (11%) Query: 78 HELKSLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L R+ C + I +T ++IIG P + F +G+ L Sbjct: 9 DALVVKARNCRLCAPHLPHQPNPIFST-APSTKVLIIGQAPGLKAHERNIAFDDPSGDRL 67 Query: 137 DKML---QSIEIMRTQIHISMISPWHP-PGNRNLSNIEMEICRPIIMRQIELISPKILLF 192 L + + I + + P N + E + + P++ L+ Sbjct: 68 RDWLSVSRETFYNPSLISVLPMGFCFPGYKNGADAPPRKECAPAWHNDFLLYLKPEVTLY 127 Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYP 241 +G ++ ++ T +P L HP L + P Sbjct: 128 VGRYSQQYYLPQHKTLTEAVR-------SPTETHFVLP--HPSGRNNRWLAKNP 172 >gi|307946593|ref|ZP_07661928.1| uracil-DNA glycosylase superfamily protein [Roseibium sp. TrichSKD4] gi|307770257|gb|EFO29483.1| uracil-DNA glycosylase superfamily protein [Roseibium sp. TrichSKD4] Length = 224 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 33/228 (14%), Positives = 66/228 (28%), Gaps = 27/228 (11%) Query: 52 PITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLM 111 P +N I S L +L+ L+ H + + + L+ Sbjct: 2 PGSNPGGIASVPTDPPRDCV-LCPRLVDLRRDLQGQH--PDWFNA--PVPSFGDADPGLL 56 Query: 112 IIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEIM-------------RTQIHISMIS 156 I+G P N +G+PF+G G++L + + Q I+ Sbjct: 57 IVGLAPGLRGANRTGRPFTGDYAGDLLYETMLEFGFASGVYEARPDDSLVLHQAMITNAV 116 Query: 157 PWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF---NNDAQKTYQNL 213 PP N+ + ++ S + +L +G + F + Sbjct: 117 RCLPPENKPVGAEVKACRPYLLATLDANPSIRAILALGRIAHDTFLTTFGLKKSLFPFSH 176 Query: 214 GKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 G L + + H + T ++ ++ L Sbjct: 177 GGRHELGVRNLT--LFDSYHCS--RYNTNTGRLTAEMFKSVFADIRTL 220 >gi|332304641|ref|YP_004432492.1| uracil-DNA glycosylase superfamily protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332171970|gb|AEE21224.1| uracil-DNA glycosylase superfamily protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 185 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 64/184 (34%), Gaps = 20/184 (10%) Query: 88 HDCHLCST----SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML--- 140 +C LC + I + ++I+G P + + P++ +G L K L Sbjct: 8 RNCQLCKAFLPLAPRPII-QGNQCSKVLIVGQAPGKLAHETNMPWNDASGVRLRKWLGIS 66 Query: 141 QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP-IIMRQIELISPKILLFIGNKTKN 199 I I + +P ++ + C P R I +S + +L IG + Sbjct: 67 AEKFYDANNIAILPMGFCYPGKAKSGDKPPRKECAPTWHERLINSMSIEHILLIGQYAQT 126 Query: 200 FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITL 254 ++ N+ T + W + ++P HP L ++P + + + Sbjct: 127 YYLNDKLSLTQRV-TNWKRYQPKYFVLP-----HPSPRNNIWLKKHPWFENEVVPHMQKV 180 Query: 255 KKAL 258 L Sbjct: 181 LAKL 184 >gi|170727468|ref|YP_001761494.1| uracil-DNA glycosylase superfamily protein [Shewanella woodyi ATCC 51908] gi|169812815|gb|ACA87399.1| Uracil-DNA glycosylase superfamily [Shewanella woodyi ATCC 51908] Length = 208 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 30/210 (14%), Positives = 64/210 (30%), Gaps = 31/210 (14%) Query: 73 KACSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130 K +L L + + + C L + I + ++I+G P + G+ FS Sbjct: 2 KTDNLTNLMAQISACQLCQEELPLPAKPII--QLSSESKILIVGQAPGIRAHDHGRAFSD 59 Query: 131 KTGNMLDKML---QSIEIMRTQIHISMISPWHP-------PGNRNLSNIEMEICRPIIMR 180 +G L L + I + P + + ++ Sbjct: 60 PSGERLRSWLGVSDEQFYDPSLFAILPMGFCFPGTIITNGKKSGDKPPLKRCAETWREAL 119 Query: 181 QIELISPKILLFIGNKTKNFFFNN----DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ- 235 +L ++ + +G ++ Q + +W + + + HP Sbjct: 120 LSQLPQVELTIILGQYAIDYHLGKSAEGKKLTVTQAISQWQDYWPEY-----MVLPHPSP 174 Query: 236 ----ELIQYPLIKKNTWHALITLKKALKNL 261 L ++P + N L LK + L Sbjct: 175 RNNLFLKKHPECEANL---LPALKARVTKL 201 >gi|188527502|ref|YP_001910189.1| hypothetical protein HPSH_03610 [Helicobacter pylori Shi470] gi|188143742|gb|ACD48159.1| hypothetical protein HPSH_03610 [Helicobacter pylori Shi470] Length = 192 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 60/184 (32%), Gaps = 13/184 (7%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 ++ + + + C S + L I TP + + ML+ Sbjct: 20 KQVYESIENCNLCKRHQNSK-PVIGLFNPTSKLTFITLTP--MLDSQLNFLNNLKAAMLE 76 Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++Q I + N E+ C + Q++ + K+++ G Sbjct: 77 SIIQKVFNCPLKDCSILSLLKC--DSNSLNLEEEINACLFHLTWQLDNSASKVIVVFGEI 134 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 N ++ G+ +L T H L+T +++++ P +KK T + Sbjct: 135 LPKRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALVHFKTALQ 187 Query: 257 ALKN 260 L Sbjct: 188 FLNQ 191 >gi|71906932|ref|YP_284519.1| hypothetical protein Daro_1297 [Dechloromonas aromatica RCB] gi|71846553|gb|AAZ46049.1| conserved hypothetical protein [Dechloromonas aromatica RCB] Length = 192 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 61/197 (30%), Gaps = 29/197 (14%) Query: 82 SLLRSFHDCHLCSTSLSTICA-----TQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 +LL C LC + +++ G P + SG PF +G+ L Sbjct: 6 ALLNEIRHCQLC--AEHLPLGPRPVLQAARSARILVAGQAPGRKVHASGVPFDDASGDRL 63 Query: 137 DKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIELISPKI 189 + L + I +I I + P G+ R ++ ++ I ++ Sbjct: 64 RQWLGVSREIFYDPARIAILPMGFCFPGTGKSGDLPPRPECAPAWRQRVLAELGQI--EM 121 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIK 244 L IG + + + + W L HP L + P + Sbjct: 122 TLVIGQYAQAYHLPDATGNLTDTVRDWRRHWPA-----VLPLPHPSPRNNLWLSRNPWFE 176 Query: 245 KNTWHALITLKKALKNL 261 L L++ + + Sbjct: 177 AEV---LPALRQRVAEV 190 >gi|327483139|gb|AEA77546.1| Hypothetical protein VCLMA_A0232 [Vibrio cholerae LMA3894-4] Length = 190 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 58/166 (34%), Gaps = 14/166 (8%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L + +R C L + + + ++IIG + + P++ +G Sbjct: 2 LESLLTEIRQCTVCEPHLPLGA-NPVI-RAHPAAKILIIGQASGTKVHQTSIPWNDASGE 59 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189 L + L + I I + +P R+ + C P+ ++ P ++ Sbjct: 60 RLRQWLGLDREAFYCEENIAIMPMGLCYPGKGRSGDLPPRKECAPLWRAKVLEQLPNRQL 119 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 L IG ++++ ++ + + +W L HP Sbjct: 120 TLLIGQYAQHYYLSDKPSTLTETVQQWQRWAPS-----VLPLPHPS 160 >gi|163747271|ref|ZP_02154626.1| uracil-DNA glycosylase, putative [Oceanibulbus indolifex HEL-45] gi|161379546|gb|EDQ03960.1| uracil-DNA glycosylase, putative [Oceanibulbus indolifex HEL-45] Length = 215 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 53/177 (29%), Gaps = 21/177 (11%) Query: 76 SLHELKSLLRSFHDCHLC------STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129 ++ ++++ L + C I G L+I P + +GKPF Sbjct: 16 TMKDIRNDLAACRLCADRFAVTATQHRPRPIVWF-KPGARLLIASQAPGKRVHEAGKPFW 74 Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ---IE 183 +G L L ++ R ++ I + P + S++ R+ Sbjct: 75 DMSGTRLRDWLGLDEATFYDRNRVAIVPMGFCFPGYDAKGSDLPPPRVCAQTWREPVLDI 134 Query: 184 LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 L + + IG + T G W + A HP + Sbjct: 135 LPDLALTVLIGGYAMKYHLPEFRNVTEAVAG-WRDHPPG-----VFALPHPSW--RN 183 >gi|86134616|ref|ZP_01053198.1| Uracil-DNA glycosylase [Polaribacter sp. MED152] gi|85821479|gb|EAQ42626.1| Uracil-DNA glycosylase [Polaribacter sp. MED152] Length = 190 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 26/194 (13%), Positives = 64/194 (32%), Gaps = 19/194 (9%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 + +L + +R+ C L + I A +E +++I P ++ K + +G Sbjct: 1 MQKLLAEIRNCKLCEPHLDLGARPIIAA--SENSKILLISQAPGRIAHLKNKAWDDPSGK 58 Query: 135 MLDKMLQ---SIEIMRTQIHISMISPWHPPGNR--NLSNIEMEICRPIIMRQIELISPKI 189 +L K L S I P + + + + + ++ Sbjct: 59 VLRKWLHVDESQFYNTDHFAILPAGFCFPGKGKSGDKLPRKECAPLWHSKVMHQFKNVQL 118 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIK 244 + IGN + ++ N + + + + + + ++P HP + + P Sbjct: 119 KILIGNYAQTYYLKNKPRTLTETVKNYQSFLPEYLVLP-----HPSPRNRFWIQKNPWFT 173 Query: 245 KNTWHALITLKKAL 258 L + + Sbjct: 174 NEVIPDLQKVVTKI 187 >gi|58040338|ref|YP_192302.1| Uracil-DNA glycosylase [Gluconobacter oxydans 621H] gi|58002752|gb|AAW61646.1| Uracil-DNA glycosylase [Gluconobacter oxydans 621H] Length = 201 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 29/187 (15%), Positives = 58/187 (31%), Gaps = 19/187 (10%) Query: 69 SIAQKACSLHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126 S+ L L + +R+ C L + I A + ++I P +I+GK Sbjct: 4 SVPSPEERLEALLTEVRACRVCEAHLPLGARPLIHA--SATSRILIASQAPGTKAHIAGK 61 Query: 127 PFSGKTGNMLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEICRPIIMR 180 F +GN L L + I QI I + P + Sbjct: 62 SFYDPSGNRLRDWLGISEDIFYDTRQIAIFPMGLCYPGRLPKGGDNPPRPECAPLWRRRV 121 Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 + ++ L +G+ ++N T + + + + HP + Sbjct: 122 LSLMPDIRLTLLVGSYSQNHVLG-RGSVTERVR-NFRDYLPDY-----FPLPHPSW--RT 172 Query: 241 PLIKKNT 247 + ++ Sbjct: 173 GVWERKA 179 >gi|239831749|ref|ZP_04680078.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] gi|239824016|gb|EEQ95584.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] Length = 213 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 55/191 (28%), Gaps = 20/191 (10%) Query: 77 LHELKSLLRSFHDCH-------LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129 L ELK +R+ C + +C + I P + + PF+ Sbjct: 7 LDELKHSIRACRICRDTPRFPPPLPHEPNPVCIVSDT-AKIGICSQAPGIRVHNTSLPFN 65 Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEICRPIIMRQIE 183 +G+ L + L + ++ I + + +L Sbjct: 66 DPSGDRLRQWLGVSREEFYDPSRFAIVPMGFCFPGYDKHGGDLPPRRECRQTWHDRVFAA 125 Query: 184 LISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNL--CTPHSIIPTLATVHPQELIQY 240 + + +L +G + + + + + W + + L HP + Sbjct: 126 MPQLEFILVVGQYALAYHLPDYRGRNLTETVRNWRHFMETPNQAGRIALPLPHPSW--RN 183 Query: 241 PLI-KKNTWHA 250 K+N W Sbjct: 184 SGWLKRNPWFD 194 >gi|315586670|gb|ADU41051.1| family 4 uracil-DNA glycosylase [Helicobacter pylori 35A] Length = 212 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 27/184 (14%), Positives = 60/184 (32%), Gaps = 13/184 (7%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 ++ + + + C S + L I TP + + ML+ Sbjct: 40 KQVYEGIENCNLCKRHQNSK-PVIGLFNPTSKLTFITLTP--MLDSQLNFLNNLKAAMLE 96 Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++Q I + N E+ C ++ Q++ + K+++ G Sbjct: 97 SIIQKVFNCPLKDCSILSLLKC--DSNSLNLEEEINACLFHLIWQLDNSTSKVIVVFGEI 154 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 N ++ G+ +L T H L+T +++++ P +KK + Sbjct: 155 LPKRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFKIALQ 207 Query: 257 ALKN 260 L Sbjct: 208 FLNQ 211 >gi|305665885|ref|YP_003862172.1| hypothetical protein FB2170_06375 [Maribacter sp. HTCC2170] gi|88710660|gb|EAR02892.1| hypothetical protein FB2170_06375 [Maribacter sp. HTCC2170] Length = 189 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 64/179 (35%), Gaps = 22/179 (12%) Query: 77 LHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 + +L S +R C HL + A ++IIG P + +G P+ +G Sbjct: 1 MEKLLSEIRGCEVCKSHLPLGPRPIVAA--HPDSKIVIIGQAPGTKVHKTGVPWDDPSGR 58 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189 L K L I ++I + + +P ++ C P+ + + P ++ Sbjct: 59 QLRKWLGVSDEIFYDDSKIALIPMGFCYPGKGKSGDLPPRTECAPLWHKPMLDKMPNLEL 118 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII--PTLATVHPQ-----ELIQYP 241 ++ IG + ++ +A+K + + L HP L + P Sbjct: 119 VILIGMYAQKYYLGKEAKK------TLTETVANYESYLPKCLPLPHPSPRNRFWLTKNP 171 >gi|304392072|ref|ZP_07374014.1| uracil-DNA glycosylase family protein [Ahrensia sp. R2A130] gi|303296301|gb|EFL90659.1| uracil-DNA glycosylase family protein [Ahrensia sp. R2A130] Length = 225 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 26/192 (13%), Positives = 52/192 (27%), Gaps = 41/192 (21%) Query: 79 ELKSLLRSFHDCH-LCSTSLS-----------TICATQT-------EGQDLMIIGYTPSD 119 L LR C L + + + L+++G P Sbjct: 9 ALADPLRDCPLCPRLVEFRHESQEKYPHFYNGPVPSWGPDAADGGAKSVKLLVVGLAPGM 68 Query: 120 SDNI-SGKPFSGK-TGNMLDKMLQSI-------------EIMRTQIHISMISPWHPPGNR 164 +G+PF+G G++L L + I+ PP N+ Sbjct: 69 KGANATGRPFTGDWAGDLLYATLDKFDFTEGTFAAHPGDGLKLKGCAITNAVRCVPPQNK 128 Query: 165 NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF---FNNDAQKTYQNLGKWSNLCT 221 + + + EL + K+++ +G + N T Sbjct: 129 PVGAEINTCRQFLTQTLDELPNLKVMVTLGKIAHDSLSRTLGERVAAHPFG----HNRET 184 Query: 222 PHSIIPTLATVH 233 +++ H Sbjct: 185 AMGGYAVVSSYH 196 >gi|299135109|ref|ZP_07028300.1| Uracil-DNA glycosylase superfamily [Afipia sp. 1NLS2] gi|298590086|gb|EFI50290.1| Uracil-DNA glycosylase superfamily [Afipia sp. 1NLS2] Length = 234 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 26/176 (14%), Positives = 49/176 (27%), Gaps = 31/176 (17%) Query: 88 HDCHLC--------STS-------LSTICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131 DC LC + + L+I+G P N +G+PF+G Sbjct: 31 RDCPLCLRLASFREDNRAAHPDWFNAPVPQFGGVDAALLIVGLAPGLQGANRTGRPFTGD 90 Query: 132 T-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177 G++L + L I PP N+ + + Sbjct: 91 YAGDLLYQTLLDYGFASGHYEARPNDGLKLVNCRIGNAVHCVPPQNKPTPAEINTCRQFL 150 Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 + E+ + ++ +G + + K H I ++ H Sbjct: 151 VGTIAEMPRLRAIVSLGRISHDSTLKALGLPLRAAPFK-HGGEFQHDRIRIFSSYH 205 >gi|208434572|ref|YP_002266238.1| hypothetical protein HPG27_612 [Helicobacter pylori G27] gi|208432501|gb|ACI27372.1| hypothetical protein HPG27_612 [Helicobacter pylori G27] Length = 196 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 60/184 (32%), Gaps = 13/184 (7%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 ++ + + + C S + L I TP + + ML+ Sbjct: 24 KQVHEGIENCNLCKRHQHSK-PVIGLFNPTSKLAFITLTP--MLDSQLHFLNNLKAAMLE 80 Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++Q I + N E+ C P + Q++ + K+++ G Sbjct: 81 SIIQKVFNYPLKDCSILSLLKC--DSNSLNLEEEINACLPHLTWQLDNSASKVIVVFGEV 138 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 N ++ G+ +L T H L+T +++++ P +KK + Sbjct: 139 LPKRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFKIALQ 191 Query: 257 ALKN 260 L Sbjct: 192 FLNQ 195 >gi|110833891|ref|YP_692750.1| hypothetical protein ABO_1030 [Alcanivorax borkumensis SK2] gi|110647002|emb|CAL16478.1| conserved hypothetical protein [Alcanivorax borkumensis SK2] Length = 198 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 53/167 (31%), Gaps = 16/167 (9%) Query: 79 ELKSLLRSFHDCHLCST----SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 +L LL C LC + + G L+I+G P + +G P++ +G+ Sbjct: 3 QLIDLLEDVRACRLCESHLPLGPRPVVQAGQ-GARLLIVGQAPGTRVHETGIPWNDPSGD 61 Query: 135 MLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEICRPIIMRQIELISPK 188 L L + +QI I + G E + EL + + Sbjct: 62 RLRDWLQVGRETFYDESQIAIIPMGLCYPGRGKGGDLPPRPEC-APQWHGPLLAELPNLR 120 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 + L +G + F+ + + ++ HP Sbjct: 121 LTLLVGRYAQRFYLAKPGKTLTDTVRHFARALDQG----FFPLPHPS 163 >gi|229827665|ref|ZP_04453734.1| hypothetical protein GCWU000182_03054 [Abiotrophia defectiva ATCC 49176] gi|229788125|gb|EEP24239.1| hypothetical protein GCWU000182_03054 [Abiotrophia defectiva ATCC 49176] Length = 196 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 56/165 (33%), Gaps = 16/165 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNML--DKMLQSIEIMRTQIHISMISPWHPPG 162 + ++I+G P S PF+ K+G L + +I I + + P Sbjct: 36 SPKARILIVGQAPGKKVEDSLIPFNDKSGEKLIQWMGIDRDTFYSEKIAIMPMDFYFPGK 95 Query: 163 NRNLSNIEMEICRPIIMRQIELISPKI--LLFIGNKTKNFFFNND-AQKTYQNLGKWSNL 219 + ++I + PK+ + IG + ++ + + + + + Sbjct: 96 GKTGDLPPRSFIAKEYHKEILALMPKVSLTILIGAYSMKYYLGSKMGKNLTETVKNYREY 155 Query: 220 CTPHSIIPTLATVHPQEL-----IQYPLIKKNTWHALI-TLKKAL 258 + I VHP L + P ++ L +K+ L Sbjct: 156 LPDYFTI-----VHPSPLNFFWQRKNPWFEEEVVPELQRRVKEVL 195 >gi|319407022|emb|CBI80659.1| conserved hypothetical protein [Bartonella sp. 1-1C] Length = 222 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 25/151 (16%), Positives = 43/151 (28%), Gaps = 22/151 (14%) Query: 101 CATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEI------------- 145 L+I+G P N +G+PF+G G++L L+ Sbjct: 46 PHKGAATTRLLIVGLAPGLRGANRTGRPFTGDYAGHLLYSTLKKFGFAQGTFAERSDDSL 105 Query: 146 MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FF 202 I PP N+ L K ++ +G+ N Sbjct: 106 ELIDTAIVNSVRCVPPENKPTGTEINTCRHFFSPLLTNLPQLKAIITLGSIAHNSTIRAL 165 Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 N GK S++ + ++ H Sbjct: 166 NAKTSAHPFGHGKISDI----GRLRIFSSYH 192 >gi|312278435|gb|ADQ63092.1| Uracil-DNA glycosylase, putative [Streptococcus thermophilus ND03] Length = 194 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 22/196 (11%), Positives = 59/196 (30%), Gaps = 18/196 (9%) Query: 75 CSLHELKSLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 +L EL + + + + + + + I+G P SG ++ +G Sbjct: 2 ETLEELTQAIMADEQNKTYTEQGIKPLFSI-PKTARINIVGQAPGIRAQESGLYWNDPSG 60 Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLS-----NIEMEICRPIIMRQIELISPK 188 + L + + + I P + + + + + Sbjct: 61 DNLRDWMGVSREEFYESGLFAIVPMDFYFPGHGKSGDLGPRKGFADKWHERVLDLAPNIQ 120 Query: 189 ILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPL 242 + + +GN ++++ + + + + + + VHP + P Sbjct: 121 LTILVGNYAQHYYLHQKSSTKLTDTVKHYRDYLPDY-----FPLVHPSPRNNIWQAKNPW 175 Query: 243 IKKNTWHALITLKKAL 258 KK L L + + Sbjct: 176 FKKELLPDLKELVQKI 191 >gi|332519364|ref|ZP_08395831.1| Uracil-DNA glycosylase superfamily [Lacinutrix algicola 5H-3-7-4] gi|332045212|gb|EGI81405.1| Uracil-DNA glycosylase superfamily [Lacinutrix algicola 5H-3-7-4] Length = 190 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 58/163 (35%), Gaps = 16/163 (9%) Query: 83 LLRSFHDCHLCST----SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDK 138 LL++ C +C + + + ++IIG P + SG P+ ++G L + Sbjct: 4 LLKNIKQCDICKSHLPLGPRPVVTA-NKSSKIVIIGQAPGTKVHASGIPWDDQSGKKLRQ 62 Query: 139 ML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFI 193 L I + +P + C +I P K+++ I Sbjct: 63 WLNVSNKEFYNTKNFAIVPMGFCYPGKGKTGDLPPRPECAKQWHEKILETMPNVKLIILI 122 Query: 194 GNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQ 235 G + ++ + A+KT + + N + IP HP Sbjct: 123 GAYAQKYYLKDKAKKTLTDTVSDYKNYLPKYFPIP-----HPS 160 >gi|19745596|ref|NP_606732.1| hypothetical protein spyM18_0514 [Streptococcus pyogenes MGAS8232] gi|19747721|gb|AAL97231.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232] Length = 191 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 24/192 (12%), Positives = 54/192 (28%), Gaps = 20/192 (10%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTIC-ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 + +L + + +L T + ++I+G P + ++ ++G Sbjct: 1 MDDLTKAIMADEA-NLSYTERGIFPLYDAPQTARIIIVGQAPGIVAQETKLYWNDRSGIR 59 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNL-----SNIEMEICRPIIMRQIELISPKIL 190 L L + I P E + + + ++ Sbjct: 60 LRDWLGVDNDTFYHSGLFGIIPMDFYYPGKGKSGDLPPREGFAAKWHPPLRALMPEVELT 119 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKK 245 + +G ++F+ A KT + P VHP L + P Sbjct: 120 ILVGRYAQDFYLGKKAYKTLTETVRHFEEYLPD----CFPLVHPSPRNQLWLAKNPW--- 172 Query: 246 NTWHALITLKKA 257 L+ + + Sbjct: 173 -FEQDLLPILQK 183 >gi|319404010|emb|CBI77598.1| conserved hypothetical protein [Bartonella rochalimae ATCC BAA-1498] Length = 222 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 25/151 (16%), Positives = 43/151 (28%), Gaps = 22/151 (14%) Query: 101 CATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEI------------- 145 L+I+G P N +G+PF+G G++L L+ Sbjct: 46 PHKGAATTRLLIVGLAPGLRGANRTGRPFTGDYAGHLLYSTLKKFGFAQGTFAERSDDSL 105 Query: 146 MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FF 202 I PP N+ L K ++ +G+ N Sbjct: 106 ELIDTAIVNSVRCVPPENKPTGTEINTCRHFFSPLLTNLPQLKAIITLGSIAHNSTLRAL 165 Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 N GK S++ + ++ H Sbjct: 166 NAKTSAHPFGHGKISDI----GRLRIFSSYH 192 >gi|227486531|ref|ZP_03916847.1| uracil-DNA glycosylase [Anaerococcus lactolyticus ATCC 51172] gi|227235487|gb|EEI85502.1| uracil-DNA glycosylase [Anaerococcus lactolyticus ATCC 51172] Length = 190 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 65/193 (33%), Gaps = 22/193 (11%) Query: 80 LKSLLRSFHDCHLCSTS-LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDK 138 +K L + + + ++ I ++IIG P + +G F+ K+G L K Sbjct: 7 IKKLREDCRN-EIYTNRGINPIF-QLNPKSKILIIGQAPGERVEETGILFNDKSGENLVK 64 Query: 139 MLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE------LISPKILLF 192 L E + I P + + + R I ++ L K+ + Sbjct: 65 WLGISEDVLHSED-FSIIPMDFYYPGKGKSGD-KAPRSFIAKEYHPLLLNELKDIKLTIL 122 Query: 193 IGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKN 246 IG + F+ + +K + + + + HP + + P ++ Sbjct: 123 IGAYAQKFYLKDKFKKNLTETVKSYKEFLPEY-----FPIAHPSPLNNRWIAKNPFFREE 177 Query: 247 TWHALITLKKALK 259 L + K L+ Sbjct: 178 VLPELKKIVKNLR 190 >gi|241895075|ref|ZP_04782371.1| uracil DNA glycosylase family protein [Weissella paramesenteroides ATCC 33313] gi|241871793|gb|EER75544.1| uracil DNA glycosylase family protein [Weissella paramesenteroides ATCC 33313] Length = 195 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 23/167 (13%), Positives = 55/167 (32%), Gaps = 19/167 (11%) Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP--WHPPGN 163 ++IIG P +G PF+ ++G+ L + + P ++ PG Sbjct: 33 PDVRILIIGQAPGAKVEQTGIPFNDQSGDRLREWMGITSDEFYNSGKVGNLPLDFYFPGK 92 Query: 164 RNL---SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220 + + ++ +++ +G + F+ +T + K Sbjct: 93 GKSGDLPPRKGFAEKWHPKMLADMPKVSLIILVGAYAQRFYLPIKKSETMTAVIK----R 148 Query: 221 TPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALI-TLKKALKNL 261 + + VHP L + P + ++ L+ ++ L Sbjct: 149 SQEFEPKFMPIVHPSPRNNIWLRKNPWFEA----DIVPRLQARVREL 191 >gi|238062761|ref|ZP_04607470.1| uracil-DNA glycosylase superfamily protein [Micromonospora sp. ATCC 39149] gi|237884572|gb|EEP73400.1| uracil-DNA glycosylase superfamily protein [Micromonospora sp. ATCC 39149] Length = 246 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 50/165 (30%), Gaps = 36/165 (21%) Query: 56 IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL------------------ 97 + P A A +A L +L + C Sbjct: 1 MAEARIPDEVVAR--AARATDLVDLDGAVSDCFACPRLVAWREEVARTKRAAFRDQAYWG 58 Query: 98 STICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQSIEIMRTQI----- 150 + T + I+G P+ N +G+ F+G ++G++L L + Sbjct: 59 RPVPGFGTSDARIGILGLAPAAHGGNRTGRIFTGDRSGDVLFAALHRAGLANQPTSVAAD 118 Query: 151 --------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP 187 I PP N + E + C P + R++ LI P Sbjct: 119 DGLALRALRIFAAVRCAPPDN-KPTPAERDTCAPWLHREVALIRP 162 >gi|332673497|gb|AEE70314.1| family 4 uracil-DNA glycosylase [Helicobacter pylori 83] Length = 209 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 63/191 (32%), Gaps = 14/191 (7%) Query: 72 QKACSLH-ELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130 + SL+ ++ + + + C S + L I TP + + Sbjct: 30 PQNKSLNKQVYEGIENCNLCKRHQNSK-PVIGLFNPTSKLTFITLTP--MLDSQLNFLNN 86 Query: 131 KTGNMLDKMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189 ML+ ++Q I + N E+ C + Q++ + K+ Sbjct: 87 LKAAMLESIIQKVFNCPLKDCSILSLLKC--DSNSLNLEEEINACLFHLTWQLDNSASKV 144 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249 ++ G N ++ G+ +L T H L+T +++++ P +KK Sbjct: 145 IVVFGEILPKRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALV 197 Query: 250 ALITLKKALKN 260 + L Sbjct: 198 HFKIALQFLNQ 208 >gi|163868288|ref|YP_001609497.1| hypothetical protein Btr_1130 [Bartonella tribocorum CIP 105476] gi|161017944|emb|CAK01502.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476] Length = 209 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 25/189 (13%), Positives = 61/189 (32%), Gaps = 21/189 (11%) Query: 72 QKACSLHELKSLLRSFHDC--------HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123 ++ + +L+ + S C L + + + I G P + Sbjct: 2 KQCSQIIKLEKKIYSCRVCIQQPHYFPPL-PHEPNPVVYLSDT-ASIAIAGQAPGLRVHE 59 Query: 124 SGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180 + PF+ ++G L L + ++ + + P ++N +++ I Sbjct: 60 TSVPFNDRSGERLRDWLNVRKEEFYNKSLFALVPMGFCFPGYDKNKADLPPRRECREIWH 119 Query: 181 Q---IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK-WSNL--CTPHSIIPTLATVHP 234 + + K++L IG+ + + KT + W N+ + + HP Sbjct: 120 EKIFQAMPQIKLVLAIGSYAQKWHITELKHKTVSATVRDWRNILSISQPRGYNVMPLPHP 179 Query: 235 QELIQYPLI 243 + Sbjct: 180 SW--RNTSW 186 >gi|317014071|gb|ADU81507.1| hypothetical protein HPGAM_03355 [Helicobacter pylori Gambia94/24] Length = 196 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 26/184 (14%), Positives = 60/184 (32%), Gaps = 13/184 (7%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 ++ + + + C S + + I TP + + ML Sbjct: 24 KQVHEGIENCNLCKRHQHSK-PVIGLFNPTSKIAFITLTP--MLDSQLHFLNNLKAVMLQ 80 Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++Q I + N E+ C P ++ Q++ + K+++ G Sbjct: 81 SIIQKVFNYPLKDCSILSLLKC--DSNSLNLEEEINACLPHLIWQLDNSASKVIVVFGEI 138 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 N ++ G+ +L + H L+T +++++ P +KK + Sbjct: 139 LPKRLLNLSK---EESFGRIVSLKSKH----FLSTHALEDMLKNPTLKKEALAHFKIALQ 191 Query: 257 ALKN 260 L Sbjct: 192 FLNQ 195 >gi|188580772|ref|YP_001924217.1| Uracil-DNA glycosylase superfamily [Methylobacterium populi BJ001] gi|179344270|gb|ACB79682.1| Uracil-DNA glycosylase superfamily [Methylobacterium populi BJ001] Length = 220 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 24/173 (13%), Positives = 48/173 (27%), Gaps = 19/173 (10%) Query: 81 KSLLRSFHDCHLCSTSLSTICA-----------TQTEGQDLMIIGYTPSDSDNISGKPFS 129 ++ C LC + + + L+I P + + SG PFS Sbjct: 17 EATAARLRACRLCRDA--PLFGAPLPHEPRPVVQGSATARLLIASQAPGNRAHRSGIPFS 74 Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPWHP---PGNRNLSNIEMEICRPIIMRQIE 183 +G L L ++ ++ I + P + Sbjct: 75 DPSGRRLRAWLGLDEAAFYDSGRVAILPMGACFPGLDAKGGDRPPRRECAPTWRADLLAG 134 Query: 184 LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236 L ++L IG + + + + +W + + L HP Sbjct: 135 LPRLDLILVIGQYAQAWHLGPRPGGLTETVARWRAILAASARPRVLPLPHPSW 187 >gi|237741843|ref|ZP_04572324.1| DNA polymerase [Fusobacterium sp. 4_1_13] gi|229429491|gb|EEO39703.1| DNA polymerase [Fusobacterium sp. 4_1_13] Length = 195 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 36/190 (18%), Positives = 66/190 (34%), Gaps = 12/190 (6%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 +LK S + L D++ IG P K +G L Sbjct: 8 WEDLKFEAGSIGNELLPKDRQEVYIGMGDRNADVLFIGNDPKLYLAEDYKVEPQSSGAFL 67 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++L +E + +I+ I+ +N + E + ++ QI LISPKI++F+G + Sbjct: 68 IRLLDVVEYLPETYYITTITK-REIKIKNFNKEERKKLIDLLFMQILLISPKIVVFLGKE 126 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIKKNTW-----H 249 N G++ T + +I + KK T + Sbjct: 127 VAQ-LIENKEIDFDDERGQFKKWRGDVETYL---TYDVETVIKARNDSGKKATIALNFLN 182 Query: 250 ALITLKKALK 259 + +K+ L Sbjct: 183 DIKNVKERLN 192 >gi|210134857|ref|YP_002301296.1| hypothetical protein HPP12_0663 [Helicobacter pylori P12] gi|210132825|gb|ACJ07816.1| hypothetical protein HPP12_0663 [Helicobacter pylori P12] Length = 209 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 60/184 (32%), Gaps = 13/184 (7%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 ++ + + + C S + L I TP + + ML+ Sbjct: 37 KQVHEGIENCNLCKRHQHSK-PVIGLFNPTSKLAFITLTP--MLDSQLHFLNNLKAAMLE 93 Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++Q I + N E+ C P + Q++ + K+++ G Sbjct: 94 SIIQKVFNYPLKDCSILSLLKC--DSNSLNLEEEINACLPHLTWQLDNSASKVIVVFGEI 151 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 N ++ G+ +L T H L+T +++++ P +KK + Sbjct: 152 LPRRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFKIALQ 204 Query: 257 ALKN 260 L Sbjct: 205 FLNQ 208 >gi|241765195|ref|ZP_04763180.1| conserved hypothetical protein [Acidovorax delafieldii 2AN] gi|241365163|gb|EER60030.1| conserved hypothetical protein [Acidovorax delafieldii 2AN] Length = 71 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 11/72 (15%), Positives = 23/72 (31%), Gaps = 5/72 (6%) Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW 248 ++L +G+ + LG+ + P + T P L++ K + W Sbjct: 1 MVLVLGHVAARAALGR-----TEPLGRLRADLHQMAGCPAIVTYDPAFLLRSQDTKPSAW 55 Query: 249 HALITLKKALKN 260 L + Sbjct: 56 ADLCRALALVAA 67 >gi|145593457|ref|YP_001157754.1| uracil-DNA glycosylase superfamily protein [Salinispora tropica CNB-440] gi|145302794|gb|ABP53376.1| Uracil-DNA glycosylase superfamily [Salinispora tropica CNB-440] Length = 253 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 26/191 (13%), Positives = 55/191 (28%), Gaps = 42/191 (21%) Query: 84 LRSFHDCHL--------CSTSL----------STICATQTEGQDLMIIGYTPSDS-DNIS 124 + C T + + ++G P+ N + Sbjct: 34 ISDCFACPRLVEWREEVARTRRAAFREQEYWGRPVPGFGDPTARIALLGLAPAAHGGNRT 93 Query: 125 GKPFSG-KTGNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGNRNLSNIE 170 G+ F+G ++G++L L + + PPGN + E Sbjct: 94 GRVFTGDRSGDVLFAALHRAGLANQPTSVAADDGLTLRHTRVFAAVRCAPPGN-KPTPGE 152 Query: 171 MEICRPIIMRQIELISP--KILLFIGNKTKNF----FFNNDAQKTYQNLGKW-SNLCTPH 223 + C+P + R++ L+ P ++++ +G + Sbjct: 153 RDTCQPWLHREVALLRPNLRVVVALGAFAWAAWWPTLHGVYGMPPPSPRPAFTHGAHWSG 212 Query: 224 SIIP-TLATVH 233 S +P L H Sbjct: 213 SAVPDLLGCYH 223 >gi|254448833|ref|ZP_05062289.1| 1-(5-Phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase [gamma proteobacterium HTCC5015] gi|198261523|gb|EDY85812.1| 1-(5-Phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase [gamma proteobacterium HTCC5015] Length = 193 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 58/175 (33%), Gaps = 18/175 (10%) Query: 80 LKSLLRSFHDCHLCSTSL----STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 L L++ C LC +L + +++IG P + S P+ +G Sbjct: 4 LTQLIQEAERCRLCEAALPEGPRPVF-RAHSNARILVIGQAPGRRVHASAIPWDDPSGER 62 Query: 136 LDKM--LQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL--L 191 L + L ++ I + +P + C P + P I L Sbjct: 63 LRRWMALDKTRFYSDRLAILPMGFCYPGTGTSGDLPPRPECAPQWHLPLIAHMPHIELSL 122 Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYP 241 FIG + + + A+ + + ++ T+A HP L + P Sbjct: 123 FIGQYAQRHYLDQRAKNLTETVRQYEQWLENG----TIALPHPSPRNNRWLSKNP 173 >gi|39935756|ref|NP_948032.1| Uracil-DNA glycosylase superfamily [Rhodopseudomonas palustris CGA009] gi|39649609|emb|CAE28131.1| possible uracil-DNA glycosylase [Rhodopseudomonas palustris CGA009] Length = 224 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 29/194 (14%), Positives = 55/194 (28%), Gaps = 26/194 (13%) Query: 58 HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117 + D L E +S +R+ + + + L+I+G P Sbjct: 10 PRVPTSLTDPDRDCPFCPRLAEFRSEVRARE--PGWFNA--PVPSFGGADASLLIVGLAP 65 Query: 118 SDSD-NISGKPFSGKT-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPG 162 N +G+PF+G G++L L IS PP Sbjct: 66 GLQGANRTGRPFTGDYAGDLLYATLIDYGFAQGHYQARPDDGLQLIDCRISNAVRCVPPQ 125 Query: 163 NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSNL 219 N+ L R +I + + ++ +G + A + G + Sbjct: 126 NKPLPLEINTCRRFLIATIEAMPKLRAIVLLGRIAHDSTLKALGLRAAQAPFGHGAVHDA 185 Query: 220 CTPHSIIPTLATVH 233 + + H Sbjct: 186 ----GRLRLYDSYH 195 >gi|162147944|ref|YP_001602405.1| uracil DNA glycosylase [Gluconacetobacter diazotrophicus PAl 5] gi|161786521|emb|CAP56103.1| putative Uracil DNA glycosylase [Gluconacetobacter diazotrophicus PAl 5] Length = 231 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 30/235 (12%), Positives = 56/235 (23%), Gaps = 26/235 (11%) Query: 44 KSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHE--LKSLLRSFHDCHLCSTSLSTIC 101 A+ + SP L E L + + + Sbjct: 2 PPRSRALARLPPHPWSTSPGPDIPPRDCPACPRLVEYRLANQAA-------HPDWWNPVH 54 Query: 102 ATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEIM------------- 146 L+I+G P N + +PF+G G +L + L Sbjct: 55 RGARAAHSLLIVGLAPGVKGANRTARPFTGDYAGTLLYETLIEYGFATGRYGADPTDGLV 114 Query: 147 RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206 I PP N ++ + + + K +L +G N Sbjct: 115 LNDCRIVNAVRCVPPANLPQTSEVRTCNHFLRSELTSMPNLKAVLTLGVVAHNATVAACG 174 Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + + T + + + H T + L+ L Sbjct: 175 IPMSRIRFTHGQVQTLPNGLVLTDSYHVS--RYNTNTGVLTTDMFRAVVARLRAL 227 >gi|34762342|ref|ZP_00143345.1| DNA POLYMERASE, BACTERIOPHAGE-TYPE [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887996|gb|EAA25060.1| DNA POLYMERASE, BACTERIOPHAGE-TYPE [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 195 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 36/190 (18%), Positives = 66/190 (34%), Gaps = 12/190 (6%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 +LK S + L D++ IG P K +G L Sbjct: 8 WEDLKFEAGSIGNELLPKDRQEVYIGMGDRNADVLFIGNDPKLYLAEDYKVEPQSSGAFL 67 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++L +E + +I+ I+ +N + E + ++ QI LISPKI++F+G + Sbjct: 68 IRLLDVVEYLPETYYITTITK-REIKIKNFNKEERKKLIDLLFMQILLISPKIVVFLGKE 126 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIKKNTW-----H 249 N G++ T + +I + KK T + Sbjct: 127 VAQ-LIENKEIDFDDERGQFKKWRGNVETYL---TYDVETVIKARNDSGKKATIALNFLN 182 Query: 250 ALITLKKALK 259 + +K+ L Sbjct: 183 DIKNVKERLN 192 >gi|222112456|ref|YP_002554720.1| phage spo1 DNA polymerase-like protein [Acidovorax ebreus TPSY] gi|221731900|gb|ACM34720.1| phage SPO1 DNA polymerase-related protein [Acidovorax ebreus TPSY] Length = 257 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 27/199 (13%), Positives = 64/199 (32%), Gaps = 22/199 (11%) Query: 42 KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTS-LSTI 100 + + + P A A + L++ + L + I Sbjct: 55 AQPTPAAPSAPRQPAHAAAPAAPASEPRTAGAAPTGLLLRAPVA------LYPQADPQAI 108 Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160 G +++ +P+ ++ P +G +G +LD ML+++ + R H Sbjct: 109 PPE--LGAGWLVVLESPTPAE-----PLAGDSGRLLDNMLRAMRLHRHPRTFVATLNRHA 161 Query: 161 PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220 PG E + + ++ + P ++L +G + + +L Sbjct: 162 PG----LTAEGLEPAAGLQQALQTLRPSLVLVLGLGAARVVLGSREPL-GRLRATAHHLP 216 Query: 221 TPHSIIPTLATVHPQELIQ 239 P + + P L++ Sbjct: 217 ---DGTPAVVSYDPAYLLR 232 >gi|320527954|ref|ZP_08029120.1| uracil DNA glycosylase family protein [Solobacterium moorei F0204] gi|320131580|gb|EFW24144.1| uracil DNA glycosylase family protein [Solobacterium moorei F0204] Length = 191 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 57/166 (34%), Gaps = 16/166 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML--QSIEIMRTQIHISMISPWHPPG 162 ++IIG P SG PF ++G L K + E I I + ++P Sbjct: 31 DANAKILIIGQAPGSHVERSGIPFDDQSGIRLRKWMGIDDKEFYSKDIAILPMDFYYPGK 90 Query: 163 NRNL--SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNL 219 + + + + ++ L +G + +++ +K + + + Sbjct: 91 AKTGDLPPRKFIAQEYHEKFLKLMPNIELTLLVGKYSIDYYLGKKKKKNLTETVENFQEY 150 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKALK 259 + VHP L + P ++ T L +++ LK Sbjct: 151 LPKY-----FPIVHPSPLNFRWLGKNPWFEEKTVKELQKRVRQILK 191 >gi|317012467|gb|ADU83075.1| hypothetical protein HPLT_03245 [Helicobacter pylori Lithuania75] Length = 192 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 60/184 (32%), Gaps = 13/184 (7%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 ++ + + + C S + L I TP + + ML+ Sbjct: 20 KQVHESIENCNLCKRHQHSK-PVIGLFNPTSKLAFITLTP--MLDSQLHFLNNLKAAMLE 76 Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++Q I + N E+ C P + Q++ + K+++ G Sbjct: 77 SIIQKVFNYPLKDCSILSLLKC--DSNSLNLEEEINACLPHLTWQLDNSASKVIVVFGEI 134 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 N ++ G+ +L T H L+T +++++ P +KK + Sbjct: 135 LPKRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALVHFKIALQ 187 Query: 257 ALKN 260 L Sbjct: 188 FLNQ 191 >gi|222111888|ref|YP_002554152.1| uracil-DNA glycosylase superfamily [Acidovorax ebreus TPSY] gi|221731332|gb|ACM34152.1| Uracil-DNA glycosylase superfamily [Acidovorax ebreus TPSY] Length = 221 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 59/208 (28%), Gaps = 13/208 (6%) Query: 48 SAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC-HLCSTSLSTICATQTE 106 A P + P ++ L L +R+ C + Sbjct: 1 MAKPPRNELPGHALPRNGLPRDDTRRDEPLDALLRRVRACTICAPYLPLGPRPVL-QADA 59 Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGN 163 L+I+G P + SG PF +G L L + ++ I + +P Sbjct: 60 RARLLIVGQAPGRKVHASGIPFDDASGERLRTWLGLTRETFYDPARVAIVPMGFCYPGRG 119 Query: 164 RNLSNIEMEICRPIIMRQIELISPKI--LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221 + C P + P I + +G + Q LG+ Sbjct: 120 ASGDAPPRPECAPAWRVPLLARLPNIALTVAVGQYALAWHLA---ACRGQPLGETVRSTC 176 Query: 222 PHSIIPTLATVHPQELIQYPLI-KKNTW 248 P LA HP + K++ W Sbjct: 177 TLPDAPVLALPHPSP--RNNGWLKRHPW 202 >gi|330993466|ref|ZP_08317401.1| hypothetical protein SXCC_03365 [Gluconacetobacter sp. SXCC-1] gi|329759496|gb|EGG76005.1| hypothetical protein SXCC_03365 [Gluconacetobacter sp. SXCC-1] Length = 205 Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 27/192 (14%), Positives = 54/192 (28%), Gaps = 39/192 (20%) Query: 74 ACSLHELKSLLRSFHDCH----------LCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123 A +L +L +R+ C L + L+I P + Sbjct: 2 AETLQDLLDAIRACQTCAAHLPLGPRPVLHVSRT----------ARLLIASQAPGTRVHE 51 Query: 124 SGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP---WHP-----PGNRNLSNIEMEICR 175 +G+ F+ +G+ L + + P +P G+ R Sbjct: 52 TGQSFNDASGDRLRGWMGIDRATFYDSSRIALVPMGLCYPGRLPQGGDCPPRPECAPQWR 111 Query: 176 PIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 IM Q+ I ++ L +G+ + + L + HP Sbjct: 112 ARIMAQMPDI--RLTLVVGSYAQQHILG-------KGRVSERCLDFRRYLPRYFPLPHPS 162 Query: 236 ELIQYPLIKKNT 247 + ++ T Sbjct: 163 W--RTGAWERRT 172 >gi|13476433|ref|NP_108003.1| hypothetical protein mll7751 [Mesorhizobium loti MAFF303099] gi|14027194|dbj|BAB54148.1| mll7751 [Mesorhizobium loti MAFF303099] Length = 218 Score = 53.2 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 44/151 (29%), Gaps = 22/151 (14%) Query: 101 CATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEIMRTQI-------- 150 + L+I+G P N +G+PF+G G++L L + R + Sbjct: 43 PPQGEDTVQLLIVGLAPGLRGANRTGRPFTGDYAGDLLYSTLIAHGFARGEFKARPDDGL 102 Query: 151 -----HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FF 202 I+ PP N+ + ++ + +L +G+ Sbjct: 103 ELVGTAITNAVRCVPPENKPVGAEIATCRTFLVPTIARFPKLRAVLALGSIAHQSTVRAL 162 Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 G P I ++ H Sbjct: 163 GGRVAAYPFKHG----GQLPAGGIALFSSYH 189 >gi|308184438|ref|YP_003928571.1| hypothetical protein HPSJM_03310 [Helicobacter pylori SJM180] gi|308060358|gb|ADO02254.1| hypothetical protein HPSJM_03310 [Helicobacter pylori SJM180] Length = 192 Score = 53.2 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 61/184 (33%), Gaps = 13/184 (7%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 ++ + + + C S + L I TP + + ML+ Sbjct: 20 KQVHEGIENCNLCKRHQHSK-PVIGLFNPTSKLAFITLTP--MLDSQLHFLNNLKAAMLE 76 Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++Q +I + N E+ C P + Q++ + K+++ G Sbjct: 77 SIIQKVFNYPLKDCNILSLLKC--DSNSLNLEEEINACLPHLTWQLDNSASKVIVVFGEI 134 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 N ++ G+ +L T H L+T +++++ P +KK + Sbjct: 135 LPKRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALVHFKIALQ 187 Query: 257 ALKN 260 L Sbjct: 188 FLNQ 191 >gi|163759714|ref|ZP_02166799.1| probable uracil-DNA glycosylase protein [Hoeflea phototrophica DFL-43] gi|162283311|gb|EDQ33597.1| probable uracil-DNA glycosylase protein [Hoeflea phototrophica DFL-43] Length = 219 Score = 53.2 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 27/195 (13%), Positives = 56/195 (28%), Gaps = 21/195 (10%) Query: 72 QKACSLHELKSLLRSFHDC---HLCSTSLSTICATQTEGQ------DLMIIGYTPSDSDN 122 + L + + + C L + + ++I G P + Sbjct: 8 AGCEDISALVAEISACTVCRDAPLGGPAK-ALPHDPRPVCVASATAPVLIAGQAPGTRVH 66 Query: 123 ISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHP---PGNRNLSNIEMEICRP 176 SG+PF+ +G+ L + L ++ I + P +L Sbjct: 67 ASGRPFTDPSGDRLRQWLGVDEAQFYNPANFAIVPMGFCFPGLDAKGGDLPPRRECAPAW 126 Query: 177 IIMRQIELISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSI-IPTLATVHP 234 + +++L IG + + + Q + W + L HP Sbjct: 127 RDRLMASMPQVRLILAIGQYAQAWHLGGMRRKSLTQTVADWRVILDATRSDCAVLPLPHP 186 Query: 235 QELIQYPLI-KKNTW 248 + +KN W Sbjct: 187 SW--RNSGWIRKNPW 199 >gi|89056143|ref|YP_511594.1| uracil-DNA glycosylase superfamily protein [Jannaschia sp. CCS1] gi|88865692|gb|ABD56569.1| Uracil-DNA glycosylase superfamily [Jannaschia sp. CCS1] Length = 194 Score = 53.2 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 25/197 (12%), Positives = 61/197 (30%), Gaps = 25/197 (12%) Query: 80 LKSLLRSFHDCHLC------STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 L + + C + + G +++ G P + SG+PF+ +G Sbjct: 3 LAQDIAACQICADRFAQTYPGHAPRPVVWF-RPGARILVAGQAPGMRVHRSGQPFTDPSG 61 Query: 134 NMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR---QIELISP 187 + L + + + ++ I ++ P + +++ R L Sbjct: 62 DRLRDWMGVDEKTFYDKDRVAILPMAFCFPGYDAKGADLPPPKICARTWRGPLLDALGRV 121 Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKN 246 ++ L +G + + + T + W + HP + K++ Sbjct: 122 RLTLLVGGYAQGWHLGDKTTVTARV-EAWRDHAPA-----VFPLPHPSW--RNTGWLKRH 173 Query: 247 TW---HALITLKKALKN 260 W L L+ + Sbjct: 174 PWFEAELLPVLRARVAE 190 >gi|162451252|ref|YP_001613619.1| hypothetical protein sce2980 [Sorangium cellulosum 'So ce 56'] gi|161161834|emb|CAN93139.1| hypothetical protein sce2980 [Sorangium cellulosum 'So ce 56'] Length = 277 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 53/163 (32%), Gaps = 35/163 (21%) Query: 73 KACSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLMIIG 114 A +L + + L C + A L+I+G Sbjct: 6 AARALDLITAELVECRRCPRLVAWREDVAREKRRAYRDQTYWGRPVPAFGDPDAPLVIVG 65 Query: 115 YTPSDS-DNISGKPFSG-KTGNMLDKML-------------QSIEIMRTQIHISMISPWH 159 P+ N +G+ F+G ++G+ L L + + + I+ Sbjct: 66 LAPAAHGGNRTGRMFTGDRSGDFLYAALYRAGLASQPTSTSRDDGLSLRGVFITAPCRCA 125 Query: 160 PPGNRNLSNIEMEICRPIIMRQIEL-ISPKILLFIGNKTKNFF 201 PP N + E+ CR I R++ + ++ L +G + Sbjct: 126 PPDN-KPTIAELAACRGWIDRELAVLHRARVYLALGKIGYDAV 167 >gi|86749723|ref|YP_486219.1| uracil-DNA glycosylase superfamily protein [Rhodopseudomonas palustris HaA2] gi|86572751|gb|ABD07308.1| Uracil-DNA glycosylase superfamily [Rhodopseudomonas palustris HaA2] Length = 200 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 27/178 (15%), Positives = 51/178 (28%), Gaps = 26/178 (14%) Query: 74 ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT 132 L E + LR+ + + + L+I+G P N +G+PF+G Sbjct: 2 CPRLAEFRHELRARE--PGWHNA--PVPSFGDADAALLIVGLAPGVQGANRTGRPFTGDY 57 Query: 133 -GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPII 178 G++L L IS PP N+ L R + Sbjct: 58 AGDLLYATLIDYGFATGQFQARPDDGLRLVGCRISNAVRCVPPQNKPLPVEINTCRRFLA 117 Query: 179 MRQIELISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 + + ++ +G + A + G + + + H Sbjct: 118 ATIETMPKLRAIVLLGRIAHDSTLKALGLRASQAPFGHGAVHDA----GALRLYDSYH 171 >gi|320533725|ref|ZP_08034337.1| conserved domain protein [Actinomyces sp. oral taxon 171 str. F0337] gi|320134059|gb|EFW26395.1| conserved domain protein [Actinomyces sp. oral taxon 171 str. F0337] Length = 151 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 12/124 (9%), Positives = 31/124 (25%), Gaps = 21/124 (16%) Query: 42 KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL---- 97 + +A + L L + + C Sbjct: 15 PVPPGTGWPDDPATATTPMARSASDVAHLAGASSDLPALDARITVCRACDRLVAWREEVA 74 Query: 98 ---------------STICATQTEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKML 140 + + + + ++G P+ + N +G+ F+G ++G+ L Sbjct: 75 RTGRRASFAHEPYWGRPVASVGSADARIYVVGLAPAANGANRTGRMFTGDRSGDWLWAAF 134 Query: 141 QSIE 144 Sbjct: 135 HRAG 138 >gi|325478629|gb|EGC81741.1| uracil-DNA glycosylase family protein [Anaerococcus prevotii ACS-065-V-Col13] Length = 190 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 26/178 (14%), Positives = 64/178 (35%), Gaps = 19/178 (10%) Query: 94 STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML--QSIEIMRTQIH 151 + I + ++IIG P +G F K+G+ L L + + R + Sbjct: 21 KSGKEPIF-QLNKSSKILIIGQAPGKKVEETGILFDDKSGDKLVNWLGIEKDTLYRKEFS 79 Query: 152 ISMISPWHPPGNRNLS--NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209 I + ++P + + + EL + ++ + +G + ++ ++ +K Sbjct: 80 IIPMDFYYPGKAKTGDKAPRKFIANEYHSILLKELSNIELTILVGAHAQKYYLKDNFKKN 139 Query: 210 -YQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKNL 261 Q + + + +HP L + P ++ + L+K + N+ Sbjct: 140 LTQTVKSFEEYLPEY-----FPIIHPSPLNNRWLSKNPFFEEKV---VPELRKRVNNI 189 >gi|94988018|ref|YP_596119.1| uracil DNA glycosylase superfamily protein [Streptococcus pyogenes MGAS9429] gi|94991904|ref|YP_600003.1| Uracil DNA glycosylase superfamily protein [Streptococcus pyogenes MGAS2096] gi|139474290|ref|YP_001129006.1| uracil DNA glycosylase superfamily protein [Streptococcus pyogenes str. Manfredo] gi|94541526|gb|ABF31575.1| uracil DNA glycosylase superfamily protein [Streptococcus pyogenes MGAS9429] gi|94545412|gb|ABF35459.1| Uracil DNA glycosylase superfamily protein [Streptococcus pyogenes MGAS2096] gi|134272537|emb|CAM30802.1| uracil DNA glycosylase superfamily protein [Streptococcus pyogenes str. Manfredo] Length = 191 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 55/192 (28%), Gaps = 20/192 (10%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTIC-ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 + +L + + +L T + ++I+G P + ++ ++G Sbjct: 1 MDDLTKAIMADEA-NLSYTERGIFPLYDAPQTARIIIVGQAPGIVAQETKLYWNDRSGIR 59 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNL-----SNIEMEICRPIIMRQIELISPKIL 190 L L + I P E + + + ++ Sbjct: 60 LRDWLGVDNDTFYHSGLFGIIPMDFYYPGKGKSGDLPPREGFAAKWHPPLRALMPEVELT 119 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKK 245 + +G ++F+ N A KT + P VHP L + P Sbjct: 120 ILVGRYAQDFYLGNKAYKTLTETVRHFEEYLPDY----FPLVHPSPRNQLWLAKNPW--- 172 Query: 246 NTWHALITLKKA 257 L+ + + Sbjct: 173 -FEQDLLPILQK 183 >gi|329117012|ref|ZP_08245729.1| uracil-DNA glycosylase family protein [Streptococcus parauberis NCFD 2020] gi|326907417|gb|EGE54331.1| uracil-DNA glycosylase family protein [Streptococcus parauberis NCFD 2020] Length = 191 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 22/166 (13%), Positives = 55/166 (33%), Gaps = 15/166 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + ++I+G P + ++ ++G L + L + I P Sbjct: 29 PKTAKIVIVGQAPGIIAQETKIYWNDRSGIRLREWLDVDNDTFYNSGLFGIIPMDFYYPG 88 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + + ++++ +G + + +++KT + Sbjct: 89 KGKSGDLPPRNGFADKWHQKILKTMPNVELIILVGQYAQKHYLGKESKKTLTETVRSFEE 148 Query: 220 CTPHSIIPTLATVHPQELIQYPLI-KKNTW-HA--LITLKKALKNL 261 P+ VHP + + KKN+W + TL+K + + Sbjct: 149 YLPNY----FPLVHPSP--RNQIWMKKNSWFQDQVIPTLQKRVAEI 188 >gi|27380179|ref|NP_771708.1| hypothetical protein blr5068 [Bradyrhizobium japonicum USDA 110] gi|27353333|dbj|BAC50333.1| blr5068 [Bradyrhizobium japonicum USDA 110] Length = 224 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 26/177 (14%), Positives = 48/177 (27%), Gaps = 33/177 (18%) Query: 88 HDCHLCS--------------TSLS-TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131 DC LC + + + L+I+G P N +G+PF+G Sbjct: 22 RDCPLCPRLVAFREANRAREPSWHNAPVAPFGDVKARLLIVGLAPGMQGANRTGRPFTGD 81 Query: 132 T-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177 G++L L I+ PP N+ L + + Sbjct: 82 YAGDLLYATLLEYGFAKGAYQARPDDGLKLVDCRIANAVHCVPPQNKPLPAEINTCRQFL 141 Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQ-NLGKWSNLCTPHSIIPTLATVH 233 + + + ++ +G + K Q G + H Sbjct: 142 AANLATMPNLRAIVALGRIAHDTVLKPLNLKGSQAPFG--HGAVHQAGAFRLYDSYH 196 >gi|322371383|ref|ZP_08045933.1| hypothetical protein ZOD2009_17845 [Haladaptatus paucihalophilus DX253] gi|320549051|gb|EFW90715.1| hypothetical protein ZOD2009_17845 [Haladaptatus paucihalophilus DX253] Length = 198 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 44/144 (30%), Gaps = 17/144 (11%) Query: 101 CATQTEGQDLMIIGYTPSDSDNIS-GKPFS-GKTGNMLDKMLQSIEIMRTQI-------- 150 D +IG P I PF+ G G L +L + ++ Sbjct: 2 FGYGDANADFHLIGDHPGAHGGIESNVPFTGGPVGETLQPVLNEVGLIGDVYSDRPTIAN 61 Query: 151 -HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209 +S + P R + E + ++ I+ +LL +G F + Sbjct: 62 LFMSYLHMCRLPDGRQPTPREYDDMERFFDAELRAIAAHVLLPVGRTATEHVFWEFTAQA 121 Query: 210 YQNLGKWSNLCTPHSIIPTLATVH 233 + + P +AT+H Sbjct: 122 EK-----HGIGDGRDG-PDMATLH 139 >gi|48478061|ref|YP_023767.1| uracil-DNA glycosylase [Picrophilus torridus DSM 9790] gi|48430709|gb|AAT43574.1| uracil-DNA glycosylase [Picrophilus torridus DSM 9790] Length = 218 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 29/214 (13%), Positives = 63/214 (29%), Gaps = 38/214 (17%) Query: 82 SLLRSFHDCHLC---------------STSLSTICATQTEGQDLMIIGYTPSDS-DNISG 125 + C I L+IIG P+ N +G Sbjct: 4 DEIIGCTKCDRLIKYREFVEKHKKYNEEYWSRPITGYGDINGRLLIIGLAPAAHGGNRTG 63 Query: 126 KPFSGKT-GNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLSNIEM 171 + F+G + L L + ++ +I++ PP N+ L Sbjct: 64 RIFTGDKSSDFLVSSLYSAGITNQPESRSRDDGLIYIDSYITLALKCAPPENKPLKCELK 123 Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLG-KWSNLCTPH-SIIPTL 229 + +++ + +L +G + + N + K+ N + I Sbjct: 124 NCSFFLFNEIRSMVNLRAVLVLGRIAFDSYINYLKTENVDTKNIKFKNFAYYDINNIRLY 183 Query: 230 ATVHPQELIQYPL----IKKNTWHALITLKKALK 259 + HP + K + + LI+++ + Sbjct: 184 CSYHPSP--RNVNTGLLKKDDFVNFLISIRSYIN 215 >gi|159900217|ref|YP_001546464.1| uracil-DNA glycosylase superfamily protein [Herpetosiphon aurantiacus ATCC 23779] gi|159893256|gb|ABX06336.1| uracil-DNA glycosylase superfamily [Herpetosiphon aurantiacus ATCC 23779] Length = 193 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 22/163 (13%), Positives = 52/163 (31%), Gaps = 14/163 (8%) Query: 83 LLRSFHDCHLCSTSLS-TICATQTEGQDLMIIGYTP-SDSDNISGKPFSGKT-GNMLDKM 139 L + C + + +M +G P S N +G P++ G L + Sbjct: 7 LATACFKCWRRVQERNCIVHGYGDANAKVMFVGEVPESLGANQTGVPWTRTIAGQRLQVL 66 Query: 140 LQSIEI-----------MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188 L+++ + +++ + + + +E C + R++ L++P+ Sbjct: 67 LRALRLRTASDPEHEEPRLVGAYLTYLVRCSTHADSPPTMVETSNCVAYLWRELVLVNPR 126 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231 I++ +G N+ P L Sbjct: 127 IIVTVGEAPTRLMCAKLFGHVPGNVESMHAQPLPVDQRILLPM 169 >gi|114706253|ref|ZP_01439155.1| hypothetical protein FP2506_00675 [Fulvimarina pelagi HTCC2506] gi|114538114|gb|EAU41236.1| hypothetical protein FP2506_00675 [Fulvimarina pelagi HTCC2506] Length = 200 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 41/143 (28%), Gaps = 22/143 (15%) Query: 109 DLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEI-------------MRTQIHIS 153 L+I+G P N +G+PF+G G++L L + ++ Sbjct: 32 RLLIVGLAPGVRGANRTGRPFTGDYAGDLLYATLHRHGFANDRFAADPNDGLKLFETAVT 91 Query: 154 MISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FFNNDAQKTY 210 PP N+ + R + L + + ++ +G + + Sbjct: 92 NSVRCVPPQNKPVGEEINTCRRFLSATITALPNLRAIVTLGRIAHDSTVRTLGLKLKDHA 151 Query: 211 QNLGKWSNLCTPHSIIPTLATVH 233 G T H Sbjct: 152 FGHG----AQIEARRYTLFPTYH 170 >gi|319898965|ref|YP_004159058.1| hypothetical protein BARCL_0799 [Bartonella clarridgeiae 73] gi|319402929|emb|CBI76480.1| conserved protein of unknown function [Bartonella clarridgeiae 73] Length = 211 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 59/184 (32%), Gaps = 17/184 (9%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTE------GQDLMIIGYTPSDSDNISG 125 Q+ + +L+ + S C L + + I G P + S Sbjct: 4 QQCDHIIKLEKDIHSCRVCIKHPHYLPPLPHEPRPIVYLSNTASIAIAGQAPGLRVHESF 63 Query: 126 KPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ- 181 PF+ ++G L L R+ I + P ++N S++ I + Sbjct: 64 IPFNDRSGIRLRNWLGVTNDEFYNRSLFAIVPMGFCFPGYDQNKSDLPPRSECREIWHEK 123 Query: 182 --IELISPKILLFIGNKTKNFFFNN-DAQKTYQNLGKWSNLCT--PHSIIPTLATVHPQE 236 + K++L IG+ + + N + + W N+ + + HP Sbjct: 124 VFQAMPQIKLVLAIGSYAQKWHIANLKHKTVSATVSDWKNILSTRQPRGYNVMPLPHPSW 183 Query: 237 LIQY 240 + Sbjct: 184 --RN 185 >gi|319784513|ref|YP_004143989.1| uracil-DNA glycosylase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170401|gb|ADV13939.1| Uracil-DNA glycosylase superfamily [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 218 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 44/151 (29%), Gaps = 22/151 (14%) Query: 101 CATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEIMRTQI-------- 150 L+I+G P N +G+PF+G G+ML + S R + Sbjct: 43 PPEGDAAVQLLIVGLAPGLRGANRTGRPFTGDYAGDMLYSTMISHGFARGEFKARPDDGL 102 Query: 151 -----HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FF 202 I+ PP N+ + ++ + + +L +G+ Sbjct: 103 ELVGTAITNAVRCVPPENKPVGAEIATCRTFLVPTIARFPNLRAVLALGSIAHQSTVRAL 162 Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 G P I ++ H Sbjct: 163 GGRVAAYPFKHG----GQLPAGSITLFSSYH 189 >gi|21909870|ref|NP_664138.1| hypothetical protein SpyM3_0334 [Streptococcus pyogenes MGAS315] gi|28896435|ref|NP_802785.1| hypothetical protein SPs1523 [Streptococcus pyogenes SSI-1] gi|50913758|ref|YP_059730.1| Uracil DNA glycosylase superfamily protein [Streptococcus pyogenes MGAS10394] gi|56808801|ref|ZP_00366515.1| COG1573: Uracil-DNA glycosylase [Streptococcus pyogenes M49 591] gi|94989897|ref|YP_597997.1| Uracil DNA glycosylase superfamily protein [Streptococcus pyogenes MGAS10270] gi|94993782|ref|YP_601880.1| uracil DNA glycosylase [Streptococcus pyogenes MGAS10750] gi|209558956|ref|YP_002285428.1| hypothetical protein Spy49_0400 [Streptococcus pyogenes NZ131] gi|21904057|gb|AAM78941.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315] gi|28811686|dbj|BAC64618.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1] gi|50902832|gb|AAT86547.1| Uracil DNA glycosylase superfamily protein [Streptococcus pyogenes MGAS10394] gi|94543405|gb|ABF33453.1| Uracil DNA glycosylase superfamily protein [Streptococcus pyogenes MGAS10270] gi|94547290|gb|ABF37336.1| Uracil DNA glycosylase superfamily protein [Streptococcus pyogenes MGAS10750] gi|209540157|gb|ACI60733.1| hypothetical protein Spy49_0400 [Streptococcus pyogenes NZ131] Length = 191 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 55/192 (28%), Gaps = 20/192 (10%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTIC-ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 + +L + + +L T + ++I+G P + ++ ++G Sbjct: 1 MDDLTKAIMADEA-NLSYTERGIFPLYDAPQTARIIIVGQAPGIVAQETKLYWNDRSGIR 59 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNL-----SNIEMEICRPIIMRQIELISPKIL 190 L L + I P E + + + ++ Sbjct: 60 LRDWLGVDNDTFYHSGLFGIIPMDFYYPGKGKSGDLPPREGFAAKWHPPLRALMPEVELT 119 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKK 245 + +G ++F+ N A KT + P VHP L + P Sbjct: 120 ILVGRYAQDFYLGNKAYKTLTETVRHFEDYLPDY----FPLVHPSPRNQLWLAKNPW--- 172 Query: 246 NTWHALITLKKA 257 L+ + + Sbjct: 173 -FEQDLLPILQK 183 >gi|302865405|ref|YP_003834042.1| Uracil-DNA glycosylase superfamily [Micromonospora aurantiaca ATCC 27029] gi|302568264|gb|ADL44466.1| Uracil-DNA glycosylase superfamily [Micromonospora aurantiaca ATCC 27029] Length = 237 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 51/161 (31%), Gaps = 28/161 (17%) Query: 98 STICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQ-------------S 142 + + I+G P+ N +G+ F+G ++G++L L Sbjct: 50 RPVPGLGPADARIAILGLAPAAHGGNRTGRIFTGDRSGDVLFAALHRAGLANQPTSVSAD 109 Query: 143 IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNF 200 + I PP N + E + C P + R++ELI P ++++ +G Sbjct: 110 DGLTLRDTRIFAAVRCAPPDN-KPTPDERDTCAPWLHREVELIRPTLRVVVALGAFAWAA 168 Query: 201 -------FFNNDAQKTYQNLGKWSNLCTPHSIIP-TLATVH 233 + G +P L H Sbjct: 169 WWPVLRQVYGQRPPTPRPVFG--HGAHWSGESVPALLGCYH 207 >gi|218529772|ref|YP_002420588.1| uracil-DNA glycosylase superfamily [Methylobacterium chloromethanicum CM4] gi|218522075|gb|ACK82660.1| Uracil-DNA glycosylase superfamily [Methylobacterium chloromethanicum CM4] Length = 220 Score = 52.4 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 25/182 (13%), Positives = 51/182 (28%), Gaps = 16/182 (8%) Query: 69 SIAQKACSLHELKSLLRSFHDC--------HLCSTSLSTICATQTEGQDLMIIGYTPSDS 120 +++ + + LR+ C L + + L+I P + Sbjct: 8 AMSAAPENFEATAARLRACRLCRDAPLYGAPLPHEPRPVV--QGSATARLLIASQAPGNR 65 Query: 121 DNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHP---PGNRNLSNIEMEIC 174 + SG PFS +G L L + ++ I + P + Sbjct: 66 AHRSGIPFSDPSGRRLRAWLGLDEVAFYDPARVAILPMGACFPGLDAKGGDRPPRRECAP 125 Query: 175 RPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHP 234 L ++L IG + + + + +W + + L HP Sbjct: 126 TWRADLLAGLPQLDLILVIGQYAQAWHLGPRPGGLTETVARWRAILDASARPRVLPLPHP 185 Query: 235 QE 236 Sbjct: 186 SW 187 >gi|167850917|ref|ZP_02476425.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei B7210] Length = 175 Score = 52.4 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 56/167 (33%), Gaps = 17/167 (10%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPP 161 G ++I+G P + SG P+ +G L L + + I + +P Sbjct: 4 HPGARILIVGQAPGARVHASGIPWDDASGKRLRAWLNVNDATFYDESLFAIVPMGFCYPG 63 Query: 162 GNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQKT-YQNLGKWSN 218 + N C P+ + ++ P ++ L IG + F + T + + W Sbjct: 64 RGASGDNPPRPECAPLWLDKLLAELPDIRLTLLIGQYAQRRFLGARRKSTLTETVRAWPE 123 Query: 219 LCTPHSIIPTLATVHPQELIQYPLI-KKNTWHA---LITLKKALKNL 261 + HP + K++ W L L+ + L Sbjct: 124 YAPEF-----IPLPHPSP--RNQGWLKQHPWFDADVLPALRDRVAEL 163 >gi|15674589|ref|NP_268763.1| hypothetical protein SPy_0472 [Streptococcus pyogenes M1 GAS] gi|71910200|ref|YP_281750.1| uracil DNA glycosylase superfamily protein [Streptococcus pyogenes MGAS5005] gi|13621698|gb|AAK33484.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS] gi|71852982|gb|AAZ51005.1| uracil DNA glycosylase superfamily protein [Streptococcus pyogenes MGAS5005] Length = 191 Score = 52.4 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 55/192 (28%), Gaps = 20/192 (10%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTIC-ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 + +L + + +L T + ++I+G P + ++ ++G Sbjct: 1 MDDLTKAIMADEA-NLSYTERGIFPLYDAPQTARIIIVGQAPGIVAQGTKLYWNDRSGIR 59 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNL-----SNIEMEICRPIIMRQIELISPKIL 190 L L + I P E + + + ++ Sbjct: 60 LRDWLGVDNDTFYHSGLFGIIPMDFYYPGKGKSGDLPPREGFAAKWHPPLRALMPEVELT 119 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKK 245 + +G ++F+ N A KT + P VHP L + P Sbjct: 120 ILVGRYAQDFYLGNKAYKTLTETVRHFEDYLPDY----FPLVHPSPRNQLWLAKNPW--- 172 Query: 246 NTWHALITLKKA 257 L+ + + Sbjct: 173 -FEQDLLPILQK 183 >gi|167724951|ref|ZP_02408187.1| uracil-DNA glycosylase [Burkholderia pseudomallei DM98] gi|167743892|ref|ZP_02416666.1| uracil-DNA glycosylase [Burkholderia pseudomallei 14] gi|167821077|ref|ZP_02452757.1| uracil-DNA glycosylase [Burkholderia pseudomallei 91] gi|167829438|ref|ZP_02460909.1| uracil-DNA glycosylase [Burkholderia pseudomallei 9] gi|167899517|ref|ZP_02486918.1| uracil-DNA glycosylase [Burkholderia pseudomallei 7894] gi|167907834|ref|ZP_02495039.1| uracil-DNA glycosylase [Burkholderia pseudomallei NCTC 13177] gi|167916193|ref|ZP_02503284.1| uracil-DNA glycosylase [Burkholderia pseudomallei 112] gi|167924030|ref|ZP_02511121.1| uracil-DNA glycosylase [Burkholderia pseudomallei BCC215] gi|226196951|ref|ZP_03792529.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei Pakistan 9] gi|225930934|gb|EEH26943.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei Pakistan 9] Length = 175 Score = 52.4 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 56/167 (33%), Gaps = 17/167 (10%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPP 161 G ++I+G P + SG P+ +G L L + + I + +P Sbjct: 4 HPGARILIVGQAPGARVHASGIPWDDASGKRLRAWLNVDDATFYDESLFAIVPMGFCYPG 63 Query: 162 GNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQKT-YQNLGKWSN 218 + N C P+ + ++ P ++ L IG + F + T + + W Sbjct: 64 RGASGDNPPRPECAPLWLDKLLAELPDIRLTLLIGQYAQRRFLGARRKSTLTETVRAWPE 123 Query: 219 LCTPHSIIPTLATVHPQELIQYPLI-KKNTWHA---LITLKKALKNL 261 + HP + K++ W L L+ + L Sbjct: 124 YAPEF-----IPLPHPSP--RNQGWLKQHPWFDADVLPALRDRVAEL 163 >gi|148256039|ref|YP_001240624.1| putative uracil-DNA glycosylase [Bradyrhizobium sp. BTAi1] gi|146408212|gb|ABQ36718.1| putative uracil-DNA glycosylase [Bradyrhizobium sp. BTAi1] Length = 229 Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 26/176 (14%), Positives = 46/176 (26%), Gaps = 31/176 (17%) Query: 88 HDCHLC----------STS-----LSTICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131 DC LC S + + L+I+G P N +G+PF+G Sbjct: 27 QDCPLCPRLVEFREAQRAREPSWFNSPVPSFGAADGRLLIVGLAPGLQGANRTGRPFTGD 86 Query: 132 T-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177 G +L L IS PP N+ L + + Sbjct: 87 YAGELLYGTLLRYGFAKGRFEARPDDGLTLVDCRISNAVRCVPPQNKPLPAEINQCRAFL 146 Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 + + ++ +G + + + I + H Sbjct: 147 GATIAAMPRLRSIVALGRISHDTLLKLLGLRAAAAP-FAHGAVHQAGAIKLYDSYH 201 >gi|319405450|emb|CBI79069.1| conserved hypothetical protein [Bartonella sp. AR 15-3] Length = 222 Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 45/151 (29%), Gaps = 22/151 (14%) Query: 101 CATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEIMRTQI-------- 150 L+I+G P N +G+PF+G G++L L+ + Sbjct: 46 PHKGAATTRLLIVGLAPGLRGANRTGRPFTGDYAGHLLYSTLKKFGFAQGTFAERADDTL 105 Query: 151 -----HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FF 202 I PP N+ S L K ++ +G+ N Sbjct: 106 ELIDAAIVNSVRCVPPENKPTSAEINTCRNFFSPLLTNLPQLKAIITLGSIAHNSTIRAL 165 Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 N GK S++ + ++ H Sbjct: 166 NAKILAHPFGHGKISDI----GRLRIFSSYH 192 >gi|167588910|ref|ZP_02381298.1| Uracil-DNA glycosylase superfamily protein [Burkholderia ubonensis Bu] Length = 199 Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 30/199 (15%), Positives = 63/199 (31%), Gaps = 25/199 (12%) Query: 77 LHELKSLLRSFHDC----HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 L L + +R+ C L + ++I+G P + SG P+ + Sbjct: 9 LDALLAEIRACRVCEAELPLGP---RPVL-RAHRDARILIVGQAPGARVHASGIPWDDAS 64 Query: 133 GNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP-- 187 G + L ++ I + +P + N C P+ + ++ P Sbjct: 65 GKRMRDWLGVDADTFYDASRFAIVPMGFCYPGRGASGDNPPRPECAPLWLDRLLAELPAI 124 Query: 188 KILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KK 245 ++ L +G + F + + W + L HP + K Sbjct: 125 RLTLLVGQYAQRHFLRDARKATLTDTVRAWRDY-----GPAVLPLPHPSP--RNTGWFKH 177 Query: 246 NTWHA---LITLKKALKNL 261 + W + L++ + L Sbjct: 178 HPWFDADVVPELRRRVAAL 196 >gi|88799781|ref|ZP_01115355.1| putative uracil-DNA glycosylase family protein [Reinekea sp. MED297] gi|88777515|gb|EAR08716.1| putative uracil-DNA glycosylase family protein [Reinekea sp. MED297] Length = 196 Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 33/196 (16%), Positives = 56/196 (28%), Gaps = 17/196 (8%) Query: 75 CSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 L S +R+ C L + + A ++I G P G PFS + Sbjct: 5 SQFQTLLSQVRACTHCQAELPDPAQPILQAD--PNARILIAGQAPGKQTLQKGIPFSDAS 62 Query: 133 GNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189 G L + L ++ I I + +P + C + + P I Sbjct: 63 GKRLRRWLGIDEATFYQADNIAILPMGFCYPGKGDSGDAPPRPECAELWRATLLAALPNI 122 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248 L + A + + L HP + K+++W Sbjct: 123 ELTLILGAHA--LKYHAPEYRSVTDAVEDWSALWPDRLVLP--HPSP--RNQAWFKRHSW 176 Query: 249 ---HALITLKKALKNL 261 L LK + L Sbjct: 177 FERDVLPMLKSRVSAL 192 >gi|308048103|ref|YP_003911669.1| uracil-DNA glycosylase superfamily protein [Ferrimonas balearica DSM 9799] gi|307630293|gb|ADN74595.1| uracil-DNA glycosylase superfamily protein [Ferrimonas balearica DSM 9799] Length = 206 Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 67/197 (34%), Gaps = 20/197 (10%) Query: 62 PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL--STICATQTEGQDLMIIGYTPSD 119 P A I S EL + + H C LC L + + L+IIG P Sbjct: 5 PTSASAAQIPISDDSTREL---IHTVHACRLCQDVLDPNPVV-QLASSARLLIIGQAPGL 60 Query: 120 SDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNR--NLSNIEMEIC 174 + SG P++ +G+ L L + +++ I + +P R + + Sbjct: 61 KVHQSGIPWNDASGDRLRHWLGMDRDTFYDPSRVAIIPMGLCYPGRGRSGDNPPDKRCAP 120 Query: 175 RPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHP 234 R +L + ++ L+IG + + + +W+ HP Sbjct: 121 RWHPTLLAQLPALELTLYIGQYAQKHYL-EGFTSLTDTVARWAEFGPDR-----FPLPHP 174 Query: 235 QELIQYPLI-KKNTWHA 250 + L K++ W Sbjct: 175 SP--RNTLWLKRHPWFD 189 >gi|306827877|ref|ZP_07461145.1| uracil DNA glycosylase [Streptococcus pyogenes ATCC 10782] gi|304429925|gb|EFM32966.1| uracil DNA glycosylase [Streptococcus pyogenes ATCC 10782] Length = 191 Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 55/192 (28%), Gaps = 20/192 (10%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTIC-ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 + +L + + +L T + ++I+G P + ++ ++G Sbjct: 1 MDDLTKAIMA-DKANLSYTERGIFPLYDAPQTARIIIVGQAPGIVAQETKLYWNDRSGIR 59 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNL-----SNIEMEICRPIIMRQIELISPKIL 190 L L + I P E + + + ++ Sbjct: 60 LRDWLGVDNDTFYHSGLFGIIPMDFYYPGKGKSGDLPPREGFAAKWHPPLRALMPEVELT 119 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKK 245 + +G ++F+ N A KT + P VHP L + P Sbjct: 120 ILVGRYAQDFYLGNKAYKTLTETVRHFEEYLPDY----FPLVHPSPRNQLWLAKNPW--- 172 Query: 246 NTWHALITLKKA 257 L+ + + Sbjct: 173 -FEQDLLPILQK 183 >gi|49474251|ref|YP_032293.1| hypothetical protein BQ06460 [Bartonella quintana str. Toulouse] gi|49239755|emb|CAF26137.1| hypothetical protein BQ06460 [Bartonella quintana str. Toulouse] Length = 211 Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 28/187 (14%), Positives = 57/187 (30%), Gaps = 17/187 (9%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTE------GQDLMIIGYTPSDSDNISG 125 Q+ + +L+ + S C L + + I G P + S Sbjct: 4 QQCNQIIKLEKKIYSCRVCIKHPHYLPPLPHEPRPVVYLSDTASIAIAGQAPGLRVHESS 63 Query: 126 KPFSGKTGNMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ- 181 PF+ +G L L R+ I + P ++N S++ I + Sbjct: 64 IPFNDCSGERLRNWLNVTSDEFYNRSLFAIVPMGFCFPGYDKNKSDLPPRRECSEIWHEK 123 Query: 182 --IELISPKILLFIGNKTKNFFFNN-DAQKTYQNLGKWSNLCT--PHSIIPTLATVHPQE 236 + K++L IG+ + + + + W N+ + + HP Sbjct: 124 VFQAMPQIKLVLAIGSYAQKWHIAELKHKTVSATVSDWKNILSIRQPRGYNVMPLPHPSW 183 Query: 237 LIQYPLI 243 + Sbjct: 184 --RNTAW 188 >gi|163867985|ref|YP_001609189.1| hypothetical protein Btr_0779 [Bartonella tribocorum CIP 105476] gi|161017636|emb|CAK01194.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476] Length = 227 Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 27/199 (13%), Positives = 53/199 (26%), Gaps = 25/199 (12%) Query: 56 IRHIHSPLVQQADSIAQKACSLHELKSLLRSFH-DCHLCSTS--LSTICATQTEGQDLMI 112 +++PL L + + + + L+I Sbjct: 3 PNAMNNPLTSLCPEPPPNCNLCPRLYQFIADWRVKEPSWHNAPVRPFFPYKGADTTRLLI 62 Query: 113 IGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEIMRTQIH-------------ISMISP 157 +G P N +G+PF+G G++L L+ + I Sbjct: 63 VGLAPGLRGANRTGRPFTGDYAGHLLYSTLKKFGFAQGTFEERADDNLELIDVAIVNSVR 122 Query: 158 WHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FFNNDAQKTYQNLG 214 PP N+ L K ++ +G + N G Sbjct: 123 CVPPENKPTGAEINTCRSFFSPLLTNLPKLKAVITLGTIAHHSTIRALNAKVLAHPFEHG 182 Query: 215 KWSNLCTPHSIIPTLATVH 233 K +N+ + ++ H Sbjct: 183 KINNV----GRLRIFSSYH 197 >gi|315501950|ref|YP_004080837.1| uracil-DNA glycosylase superfamily [Micromonospora sp. L5] gi|315408569|gb|ADU06686.1| Uracil-DNA glycosylase superfamily [Micromonospora sp. L5] Length = 237 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 51/161 (31%), Gaps = 28/161 (17%) Query: 98 STICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQ-------------S 142 + + I+G P+ N +G+ F+G ++G++L L Sbjct: 50 RPVPGLGPADARIAILGLAPAAHGGNRTGRIFTGDRSGDVLFAALHRAGLANQPTSVSAD 109 Query: 143 IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNF 200 + I PP N + E + C P + R++ELI P ++++ +G Sbjct: 110 DGLTLRDTRIFAAVRCAPPDN-KPTPDERDTCAPWLHREVELIRPTLRVVVALGAFAWAA 168 Query: 201 -------FFNNDAQKTYQNLGKWSNLCTPHSIIP-TLATVH 233 + G +P L H Sbjct: 169 WWPVLRQVYGQRPPTPRPAFG--HGAHWSGESVPALLGCYH 207 >gi|77407839|ref|ZP_00784592.1| Unknown [Streptococcus agalactiae COH1] gi|77173586|gb|EAO76702.1| Unknown [Streptococcus agalactiae COH1] Length = 194 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 59/161 (36%), Gaps = 16/161 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPP 161 + + I+G P + + K+G+ L + L + + + + ++P Sbjct: 32 PKTARINIVGQAPGLKTQEAILYWKDKSGDRLRQWLGVDEETFYHSGKFAVLPLDFYYPG 91 Query: 162 GNR--NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSN 218 + +L + + + E+ + ++ L +G + ++ + A K + + + + Sbjct: 92 KGKSGDLPPRKGFAEKWHPLILKEMPNVQLTLLVGQYAQKYYLGSSAHKNLTETVKSYKD 151 Query: 219 LCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITL 254 + L VHP L + P +K+ L + Sbjct: 152 YLPDY-----LPLVHPSPRNQIWLKKNPWFEKDLIVDLQKI 187 >gi|326403249|ref|YP_004283330.1| hypothetical protein ACMV_11010 [Acidiphilium multivorum AIU301] gi|325050110|dbj|BAJ80448.1| hypothetical protein ACMV_11010 [Acidiphilium multivorum AIU301] Length = 214 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 26/187 (13%), Positives = 60/187 (32%), Gaps = 23/187 (12%) Query: 61 SPLVQQADSIAQKACSLHELKSLLRSFHDC----HLCSTSLSTICATQTEGQDLMIIGYT 116 V + A ++ ++ + R+ C L + + ++I+G Sbjct: 5 PDPVVAGGAGATAGETIDDVAAAARACTVCAASLPLGP---RPVF-RISATARVLIVGQA 60 Query: 117 PSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNI 169 P + SG P++ +G+ L L ++ ++I I + +P G Sbjct: 61 PGTKVHASGIPWNDPSGDRLRDWLGIDRATFYDESRIAIVPMGLCYPGRLARGGDAPPRP 120 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 E +R + + ++ L +G+ + + G + L + Sbjct: 121 ECGRLWQGRLR-AAMPAIRLTLLVGSHAILYHLG-KGAMEERVRGFAAYLPSR------F 172 Query: 230 ATVHPQE 236 HP Sbjct: 173 PLPHPSW 179 >gi|295397230|ref|ZP_06807328.1| uracil-DNA glycosylase [Aerococcus viridans ATCC 11563] gi|294974511|gb|EFG50240.1| uracil-DNA glycosylase [Aerococcus viridans ATCC 11563] Length = 196 Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 24/174 (13%), Positives = 57/174 (32%), Gaps = 20/174 (11%) Query: 99 TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158 + ++ + IIG P + ++ ++G+ L + + + + P Sbjct: 30 PVFYA-SKNARIAIIGQAPGKKVEETQLFWNDQSGDRLRNWMGISRDLFYKTDMIAQLPM 88 Query: 159 HPPGNRNLSNIEMEICRPIIMR---QIELISP--KILLFIGNKTKNFFFNNDAQKT-YQN 212 + + + QI P + ++ IGN ++ + D QK + Sbjct: 89 DFYYPGKAKTGDKPPRKGFADKFHPQILKEMPNIETIILIGNYSQKHYLGKDRQKNLTET 148 Query: 213 LGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH------ALI-TLKKALK 259 + + + + VHP + +KKN W ++ +K Sbjct: 149 VKHYKDYLPEY-----FPLVHPSP-LNQRWMKKNPWFETDVLPDFKEMIQTYIK 196 >gi|49474059|ref|YP_032101.1| hypothetical protein BQ04210 [Bartonella quintana str. Toulouse] gi|49239563|emb|CAF25920.1| hypothetical protein BQ04210 [Bartonella quintana str. Toulouse] Length = 222 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 27/183 (14%), Positives = 48/183 (26%), Gaps = 38/183 (20%) Query: 85 RSFHDCH-LCS----------TSLSTI-----CATQTEGQDLMIIGYTPSDSD-NISGKP 127 ++ + C L + + L+IIG P N +G+P Sbjct: 14 QNCNLCPRLHKFIADWRIKEPSWHNAPVRPFFPYKGAATTRLLIIGLAPGLRGANRTGRP 73 Query: 128 FSGKT-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEI 173 F+G G +L L+ I PP N+ S Sbjct: 74 FTGDYAGQLLYSTLKKFGFAQGIFEERADDNLELIDTAIVNSVRCVPPENKPTSAEINTC 133 Query: 174 CRPIIMRQIELISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230 L K ++ +G + N G +N+ + + Sbjct: 134 RYFFSPLLTNLPKLKAVITLGTIAHHSTIHALNAKISTHPFEHGGVNNI----GRLRIFS 189 Query: 231 TVH 233 + H Sbjct: 190 SYH 192 >gi|308182861|ref|YP_003926988.1| hypothetical protein HPPC_03540 [Helicobacter pylori PeCan4] gi|308065046|gb|ADO06938.1| hypothetical protein HPPC_03540 [Helicobacter pylori PeCan4] Length = 192 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 23/184 (12%), Positives = 54/184 (29%), Gaps = 13/184 (7%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 ++ + + + C S + L I TP + + ML+ Sbjct: 20 KQVYEGIENCNLCKRHQNSK-PVIGLFNPTSKLTFITLTP--MLDSQLNFLNNLKAAMLE 76 Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++Q I + N E+ C + Q++ + K+++ G Sbjct: 77 SIIQKVFNCPLKDCSILSLLKC--DSNSLNLEEEINACLFHLTWQLDNSASKVIVVFGEI 134 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 N +++ L+T +++++ P +KK + Sbjct: 135 LPKRLLNLSKEES-------FGCIVSLKTKHFLSTHALEDMLKNPTLKKEALAHFKIALQ 187 Query: 257 ALKN 260 L Sbjct: 188 FLNQ 191 >gi|6002287|emb|CAB56749.1| hypothetical protein [Acidianus ambivalens] Length = 157 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 56/156 (35%), Gaps = 22/156 (14%) Query: 121 DNISGKPFSG-KTGNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNL 166 N +G+ F+G ++G + K L + + + +++ PP N Sbjct: 5 GNRTGRVFTGDESGKWVTKALYELGLSNLEFSLSREENLILRGVYLTNAVKCAPPEN-KP 63 Query: 167 SNIEMEICRPIIMRQIEL-ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI 225 E+ C + ++I + K++L +G + +K + G ++ Sbjct: 64 LREEILNCNYFLRKEIMSLRNLKVILALGKMAFDSVCMAFNEKCKFSHGVVYDV----KG 119 Query: 226 IPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 + + HP Q + TW + + + + L Sbjct: 120 KKIVGSYHPSA--QNTKTGRLTWESFMQVVRKAYEL 153 >gi|25011339|ref|NP_735734.1| hypothetical protein gbs1290 [Streptococcus agalactiae NEM316] gi|76799515|ref|ZP_00781650.1| uracil-DNA glycosylase [Streptococcus agalactiae 18RS21] gi|24412877|emb|CAD46949.1| Unknown [Streptococcus agalactiae NEM316] gi|76585138|gb|EAO61761.1| uracil-DNA glycosylase [Streptococcus agalactiae 18RS21] Length = 194 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 59/161 (36%), Gaps = 16/161 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPP 161 + + I+G P + + K+G+ L + L + + + + ++P Sbjct: 32 PKTARINIVGQAPGLKTQEARLYWKDKSGDRLRQWLGVDEETFYHSGKFAVLPLDFYYPG 91 Query: 162 GNR--NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSN 218 + +L + + + E+ + ++ L +G + ++ + A K + + + + Sbjct: 92 KGKSGDLPPRKGFAEKWHPLILKEMPNVQLTLLVGQYAQKYYLGSSAHKNLTETVKSYKD 151 Query: 219 LCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITL 254 + L VHP L + P +K+ L + Sbjct: 152 YLPDY-----LPLVHPSPRNQIWLKKNPWFEKDLIVDLQKI 187 >gi|254779363|ref|YP_003057468.1| putative transferase [Helicobacter pylori B38] gi|254001274|emb|CAX29251.1| Putative transferase [Helicobacter pylori B38] Length = 209 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 60/184 (32%), Gaps = 13/184 (7%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 ++ + + + C S + L I TP + + ML+ Sbjct: 37 KQVHEGIENCNLCKRHQHSK-PVTGLFNPTSKLTFITLTP--MLDSQLNFLNNLKAVMLE 93 Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++Q I + N E+ C P + Q++ + K+++ G Sbjct: 94 SIIQKVFNYPLKDCSILSLLKC--DSNSLNLEEEINACLPHLTWQLDNSASKVIVVFGEI 151 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 N ++ G+ +L T H L+T +++++ P +KK + Sbjct: 152 LPKRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFKIALQ 204 Query: 257 ALKN 260 L Sbjct: 205 FLNQ 208 >gi|300022584|ref|YP_003755195.1| uracil-DNA glycosylase superfamily [Hyphomicrobium denitrificans ATCC 51888] gi|299524405|gb|ADJ22874.1| Uracil-DNA glycosylase superfamily [Hyphomicrobium denitrificans ATCC 51888] Length = 198 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 23/174 (13%), Positives = 55/174 (31%), Gaps = 19/174 (10%) Query: 75 CSLHELKSLLRSFHDCHLCST----SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130 + L LR C +C+ + + G L+I+G P +++G P++ Sbjct: 3 KNSASLAKALRDVSACRICAAELPLGPRPVVQLGS-GARLLIVGQAPGRKVHLTGVPWND 61 Query: 131 KTGNMLDKML---QSIEIMRTQIHISMISPWHP-----PGNRNLSNIEMEICRPIIMRQI 182 +G+ L + L + +I + + +P G+ ++R + Sbjct: 62 ASGDRLREWLGLDRDTFFDAAKIALLPMGFCYPGVGKSGGDNPPRPECAPHWHERLLRHL 121 Query: 183 ELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236 + + +G + + + ++ P HP Sbjct: 122 PEVQL--TVLVGQYAHRRYLGLRGASSVTATVRDFSMYAP----RFFPLPHPSW 169 >gi|319783620|ref|YP_004143096.1| hypothetical protein Mesci_3930 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169508|gb|ADV13046.1| hypothetical protein Mesci_3930 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 226 Score = 52.1 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 30/187 (16%), Positives = 59/187 (31%), Gaps = 18/187 (9%) Query: 78 HELKSLLRSFHDCHLC--STSLSTICATQTE------GQDLMIIGYTPSDSDNISGKPFS 129 EL++L+ C +C + + + ++I P ++SG PF+ Sbjct: 24 AELENLVARVRACRICVENPAGKPLPHEPRPVLRPSSTARILIASQAPGTKVHLSGMPFT 83 Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSN-IEMEICRPIIMRQIELI 185 +G+ L L + I + P + + C + Sbjct: 84 DASGDRLRSWLGVTSDEFYDIEKFAIVPMGFCFPGQDAKGGDLPPRRECAAAWRAPLMAS 143 Query: 186 SPKI--LLFIGNKTKNFFFN-NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL 242 P+I +L IG +++ + + W ++ L HP + Sbjct: 144 MPRIDLVLTIGIYAQSWHMGAARRPSLTETVMDWRSIWENSIGPKVLPLPHPSW--RNTG 201 Query: 243 I-KKNTW 248 KKN W Sbjct: 202 WLKKNPW 208 >gi|148554142|ref|YP_001261724.1| uracil-DNA glycosylase superfamily protein [Sphingomonas wittichii RW1] gi|148499332|gb|ABQ67586.1| Uracil-DNA glycosylase superfamily [Sphingomonas wittichii RW1] Length = 232 Score = 52.1 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 23/176 (13%), Positives = 46/176 (26%), Gaps = 28/176 (15%) Query: 85 RSFHDCHLCST--SLS----------TICATQTEGQDLMIIGYTPS-DSDNISGKPFSGK 131 C + + + G L+I+G P N +G+ F+G Sbjct: 9 ADCALCPRLAAYRATQRIENPSWFNAPVPTFGDSGARLVIVGLAPGLKGANRTGRAFTGD 68 Query: 132 -TGNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSNIEMEICRPI 177 +G ML +L + R I PP NR + Sbjct: 69 GSGTMLFDVLADHGLARGGYGHDADDGLRLDGTVIVNAVRCVPPANRPTPAEVRACRPFL 128 Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 +P++++ +G + + + + + H Sbjct: 129 AGPLNGAPAPRVIVALGRIAHDATLAALGETPARFRFA-HGAEHRPEGSILIDSYH 183 >gi|254503679|ref|ZP_05115830.1| Uracil DNA glycosylase superfamily [Labrenzia alexandrii DFL-11] gi|222439750|gb|EEE46429.1| Uracil DNA glycosylase superfamily [Labrenzia alexandrii DFL-11] Length = 215 Score = 52.1 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 29/194 (14%), Positives = 57/194 (29%), Gaps = 22/194 (11%) Query: 73 KACSLHELKSLLRSFHDC-------HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISG 125 K + L + +R C L + + + I G P + SG Sbjct: 6 KIQEIEALANAVRGCRICVETPEKAPL-PHEPRPVL-QASSKARICISGQAPGTRVHKSG 63 Query: 126 KPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRN--LSNIEMEICRPIIMR 180 +PF+ +G+ L + +++ + I + P + E + R Sbjct: 64 RPFTDPSGDRLRSWMGIGENVFYDPDLLAIVPMGFCFPGLDAKGGDLPPRPECRKVWHDR 123 Query: 181 QI-ELISPKILLFIGNKTKNFFFNN-DAQKTYQNLGKWSNLCTPHS---IIPTLATVHPQ 235 + +++L IG + + + + W L HP Sbjct: 124 LFAAMPQIELILVIGQYAQAYHLGKARKGSLTETVAAWKTYFQESGQSNRPLVLPLPHPS 183 Query: 236 ELIQYPLI-KKNTW 248 + KKN W Sbjct: 184 W--RNNAWLKKNPW 195 >gi|328544443|ref|YP_004304552.1| Uracil DNA glycosylase superfamily [polymorphum gilvum SL003B-26A1] gi|326414185|gb|ADZ71248.1| Uracil DNA glycosylase superfamily [Polymorphum gilvum SL003B-26A1] Length = 228 Score = 52.1 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 24/210 (11%), Positives = 58/210 (27%), Gaps = 31/210 (14%) Query: 59 IHSPLVQQADSIAQKACSLHELKSLLRSFHDC---HLCS---TSLSTICATQTEGQDLMI 112 ++ + + EL + + C L + + + + I Sbjct: 2 VNKDRSRAVRGAGAGREPVDELARAIAACRRCVEAPLKAPLPHEPRPVV-RLSATARICI 60 Query: 113 IGYTPSDSDNISGKPFSGKTGNMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNI 169 G P + SG PF+ +G+ L + + ++ I + P + + Sbjct: 61 CGQAPGTRVHASGTPFTDPSGDRLRAWMGIGPEVFYDTAKLAIVPMGFCFPGLDAKGGDR 120 Query: 170 EMEI-CRPIIMRQIELISPK--ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII 226 CR + Q+ P+ ++L +G + + + + I Sbjct: 121 PPRAECRRLWHDQVFAAMPQLELILAVGQYAQAYHL------PARKRASLTETVADWRAI 174 Query: 227 P----------TLATVHPQELIQYPLIKKN 246 + HP + + Sbjct: 175 RTETADAGRAVVVPLPHPSW--RNNAWLRK 202 >gi|71903039|ref|YP_279842.1| uracil DNA glycosylase superfamily protein [Streptococcus pyogenes MGAS6180] gi|71802134|gb|AAX71487.1| uracil DNA glycosylase superfamily protein [Streptococcus pyogenes MGAS6180] Length = 191 Score = 52.1 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 26/192 (13%), Positives = 55/192 (28%), Gaps = 20/192 (10%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTIC-ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 + +L + + +L T + L+I+G P + ++ ++G Sbjct: 1 MDDLTKAIMADEA-NLSYTERGIFPLYDAPQTARLIIVGQAPGIVAQETKLYWNDRSGIR 59 Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNL-----SNIEMEICRPIIMRQIELISPKIL 190 L L + I P E + + + ++ Sbjct: 60 LRDWLGVDNDTFYHSGLFGIIPMDFYYPGKGKSGDLPPREGFAAKWHPPLRALMPEVELT 119 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKK 245 + +G ++F+ N A KT + P VHP L + P Sbjct: 120 ILVGRYAQDFYLGNKAYKTLTETVRHFEDYLPDY----FPLVHPSPRNQLWLAKNPW--- 172 Query: 246 NTWHALITLKKA 257 L+ + + Sbjct: 173 -FEQDLLPILQK 183 >gi|329114799|ref|ZP_08243556.1| Hypothetical protein APO_1597 [Acetobacter pomorum DM001] gi|326695930|gb|EGE47614.1| Hypothetical protein APO_1597 [Acetobacter pomorum DM001] Length = 213 Score = 52.1 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 26/193 (13%), Positives = 53/193 (27%), Gaps = 23/193 (11%) Query: 65 QQADSIAQKACSLHELKSLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTPSDSDNI 123 + L+ L +R C + + L+I G P + Sbjct: 13 PSPAESSDVETQLNCLVQEIRQCTACARKLPLGPRPVLHV-SPHARLLIAGQAPGTRVHE 71 Query: 124 SGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH----PPGNRNLSNIEMEICRP 176 +G F+ +G+ L L + ++ I ++ + P G E Sbjct: 72 TGISFNDASGDRLRGWLGMSRDAFYDSNRVAILPMALCYPGVLPKGGDRPPPPECANLWR 131 Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII--PTLATVHP 234 L + ++ L +G+ +N+ GK HP Sbjct: 132 -ERILALLPNLRLTLLVGSYAQNYVLGK---------GKVYERTEHFQDFLPQYFPLPHP 181 Query: 235 QELIQYPLIKKNT 247 + ++ T Sbjct: 182 SW--RTGAWERKT 192 >gi|319898685|ref|YP_004158778.1| hypothetical protein BARCL_0514 [Bartonella clarridgeiae 73] gi|319402649|emb|CBI76195.1| conserved protein of unknown function [Bartonella clarridgeiae 73] Length = 222 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 25/151 (16%), Positives = 45/151 (29%), Gaps = 22/151 (14%) Query: 101 CATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEIMRTQI-------- 150 L+I+G P N +G+PF+G G++L L+ + Sbjct: 46 PHKGAATTRLLIVGLAPGLRGANRTGRPFTGDYAGHLLYSTLKKFNFAQGTFAERPDDTL 105 Query: 151 -----HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FF 202 I PP N+ L K ++ +G+ N Sbjct: 106 ELIDAAIVNSVRCVPPDNKPTGAEINTCRHFFSPLLTNLPQLKAIITLGSIAHNSTIRAL 165 Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 N + GK S++ + ++ H Sbjct: 166 NAKIVVHPFSHGKVSDI----GRLRIFSSYH 192 >gi|294012176|ref|YP_003545636.1| putative uracil-DNA glycosylase [Sphingobium japonicum UT26S] gi|292675506|dbj|BAI97024.1| putative uracil-DNA glycosylase [Sphingobium japonicum UT26S] Length = 229 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 52/191 (27%), Gaps = 32/191 (16%) Query: 74 ACSLHELKSLLRSFHDCHLCST---------------SLSTICATQTEGQDLMIIGYTPS 118 A +L + HDC LC + + + I+G P Sbjct: 12 AMTLQSPIPHGEAPHDCPLCPRLAVLRERNRAEHPGWWNAPVPHFGDPLGRIAIVGLAPG 71 Query: 119 DSD-NISGKPFSGKT-GNMLDKMLQSI-------------EIMRTQIHISMISPWHPPGN 163 N +G+PF+G G++L L + I PP N Sbjct: 72 RMGANRTGRPFTGDHAGDLLFATLAKFGLTDGVYEARADDGLTLRGAIILNAVKCLPPQN 131 Query: 164 RNLSNIEMEICRPIIMRQIEL-ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP 222 E+ CR + +E ++ + +G K + Sbjct: 132 -RPLPEEVHNCRAFLKAAVEALPHAQVFVALGQIAHQSTVKALGGKLPKARFAHMAEHRM 190 Query: 223 HSIIPTLATVH 233 S + + H Sbjct: 191 PSGRIVIDSYH 201 >gi|49475297|ref|YP_033338.1| hypothetical protein BH05020 [Bartonella henselae str. Houston-1] gi|49238103|emb|CAF27310.1| hypothetical protein BH05020 [Bartonella henselae str. Houston-1] Length = 222 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 44/151 (29%), Gaps = 22/151 (14%) Query: 101 CATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEIMRTQIH------- 151 + L+I+G P N +G+PF+G G++L L+ + Sbjct: 46 PYKGADTTRLLIVGLAPGLRGANRTGRPFTGDYAGHLLYSTLKKFGFAQGTFEERADDTL 105 Query: 152 ------ISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FF 202 I PP N+ L K ++ +G + Sbjct: 106 ELIDAAIVNSVRCVPPENKPTGAEINTCRYFFSPLLTNLPKLKAVITLGTIAHHSTLRAL 165 Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 N G+ +N+ + ++ H Sbjct: 166 NAKVLAHPFGHGQINNI----GRLRIFSSYH 192 >gi|149184675|ref|ZP_01862993.1| hypothetical protein ED21_28193 [Erythrobacter sp. SD-21] gi|148831995|gb|EDL50428.1| hypothetical protein ED21_28193 [Erythrobacter sp. SD-21] Length = 261 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 30/216 (13%), Positives = 68/216 (31%), Gaps = 26/216 (12%) Query: 1 MTSKRILSQE-----QILTIALFYADSGVY---------WVFDEPNNEATYESQRKEKSI 46 M + ++E + ++ ++GV W+ + +A + K+ Sbjct: 1 MIADTPKTRELSPADALEAALDWWREAGVEDDYRDEATSWLAEPEQEQAVASPKPKKPPE 60 Query: 47 DSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKS--LLRSFHDCHLCSTSLSTICATQ 104 + P+ +P + + SL + + L+ + S + Sbjct: 61 EPKQTPLQRAFEAKAPANRIGGATEAYPDSLEKFREWWLVEPSLA---SVGTESRLPPRG 117 Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 G LM++ P + SG G +D +L ++ I + +++ P G Sbjct: 118 VGGAKLMVL--IPEPMEGDGEALLSGAPGKFVDAVLSAMGIAPHEAYLASALP---AGVT 172 Query: 165 NLSNIEMEIC--RPIIMRQIELISPKILLFIGNKTK 198 E+ + + L P +L G Sbjct: 173 LPDWTELSARGLGDVTRHHVVLAQPHRVLAFGRSLA 208 >gi|293189113|ref|ZP_06607839.1| uracil DNA glycosylase family protein [Actinomyces odontolyticus F0309] gi|292821958|gb|EFF80891.1| uracil DNA glycosylase family protein [Actinomyces odontolyticus F0309] Length = 199 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 23/176 (13%), Positives = 58/176 (32%), Gaps = 24/176 (13%) Query: 99 TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMI 155 + +MI+G P +G ++ ++G+ L + + ++ I + Sbjct: 33 PLFYAG-PECRIMIVGQAPGRVAEETGVVWNDRSGDRLRDWMGVDRDTFYESGKLAIVPM 91 Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPK--ILLFIGNKTKNFFFNNDAQKTYQNL 213 + P ++ + ++ + PK + + +G + + Sbjct: 92 DFYFPGTGKSGDLPPRKDFADTWHPRLLELMPKLEMTILVGAYATRRYLGLKSSA----- 146 Query: 214 GKWSNLCTPHSIIPTLATV----HPQELIQYPLI-KKNTW--HALI-TLKKALKNL 261 + + + L T HP + + KKN W ++ LK + +L Sbjct: 147 -SLTEVVRDYKRY--LPTYFPLVHPSP--RNQMWMKKNPWFAADVLPDLKARVASL 197 >gi|30249111|ref|NP_841181.1| hypothetical protein NE1122 [Nitrosomonas europaea ATCC 19718] gi|30138728|emb|CAD85033.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718] Length = 201 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 61/182 (33%), Gaps = 22/182 (12%) Query: 77 LHELKSLLRSFHDCHLCST----SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 +++L+SL+ C LC+ + E ++I P + +G PF+ + Sbjct: 1 MNDLESLISQVRRCTLCAEHLPLGPRPVF-QLHETARILIASQAPGRRVHETGLPFNDPS 59 Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPP-------GNRNLSNIEMEICRPIIMRQIELI 185 G+ L + L + I P G+ R ++ ++ Sbjct: 60 GDRLREWLNMTRTIFYDPRRIAILPMGLCFPGTGKSGDLPPRPECAPAWRSALLSHLK-- 117 Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLG-KWSNLCTPHSIIPTLATVHPQ-----ELIQ 239 + ++ L +G + ++F +K L + I + HP L + Sbjct: 118 NIRLTLLVGQYAQAYYFTRQGRKPVATLTENVRSWQKFWPDI--VPLPHPSPRNNLWLRR 175 Query: 240 YP 241 P Sbjct: 176 NP 177 >gi|212636050|ref|YP_002312575.1| Phage SPO1 DNA polymerase domain-containing protein [Shewanella piezotolerans WP3] gi|212557534|gb|ACJ29988.1| Phage SPO1 DNA polymerase domain protein [Shewanella piezotolerans WP3] Length = 199 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 29/187 (15%), Positives = 52/187 (27%), Gaps = 25/187 (13%) Query: 77 LHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L L ++ C HL + + ++I G P + G PF +G Sbjct: 7 LDNLLKQVQQCQLCSEHLPFAAKPIVQLASN--AKILIAGQAPGQKTHHKGHPFDDASGE 64 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP-------IIMRQIELISP 187 L L + P + S+ + + RQ L Sbjct: 65 RLRSWLGVTREQFYDPELFAFLPMGFCFPGSYSSADKKSGDKPPRPECAATWRQPILNEL 124 Query: 188 KIL---LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQ 239 K + L +G + + + +W L L HP L + Sbjct: 125 KHIELTLLVGQYAIEWHLKRKLAV-TKAVEQWQELWPQ-----VLVMPHPSPRNNIWLKR 178 Query: 240 YPLIKKN 246 +P ++ Sbjct: 179 HPEFEQQ 185 >gi|163760602|ref|ZP_02167683.1| hypothetical protein HPDFL43_11926 [Hoeflea phototrophica DFL-43] gi|162282217|gb|EDQ32507.1| hypothetical protein HPDFL43_11926 [Hoeflea phototrophica DFL-43] Length = 181 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 18/150 (12%), Positives = 49/150 (32%), Gaps = 18/150 (12%) Query: 100 ICATQTEGQDLMIIGYTPSDSDNI-SGKPFSGKT-GNMLDKMLQSIEI------------ 145 I +L+++G P +G+PF+G G++L + L + Sbjct: 5 IPPEGAGSVELLVVGLAPGLRGANLTGRPFTGDFAGDLLYETLGAHGFASGTFEARRDDS 64 Query: 146 -MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF-FFN 203 + I+ PP N+ + + + + + + ++ +G + + Sbjct: 65 LRLRRTAITNAVRCVPPQNKPVGAEINTCRKFLNGTITGMHNLRAIVTLGKISHDSTVRG 124 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 + + + G + ++ H Sbjct: 125 LGGKLSAHSFGHQRETEI--DGVRIFSSYH 152 >gi|313126954|ref|YP_004037224.1| uracil-DNA glycosylase [Halogeometricum borinquense DSM 11551] gi|312293319|gb|ADQ67779.1| uracil-DNA glycosylase [Halogeometricum borinquense DSM 11551] Length = 195 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 19/147 (12%), Positives = 40/147 (27%), Gaps = 10/147 (6%) Query: 98 STICATQTEGQDLMIIGYTPSDS-DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156 + +IG P I+G PF+ + G L L ++ T ++ Sbjct: 7 RFVPGYGDANAYFHVIGDHPGVHGGKITGVPFTNEPGIRLQAALADAGLLETTGDQPTVA 66 Query: 157 PWHPPGNRNLSNI------EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210 E + ++ I+ +L +G + + N + Sbjct: 67 KTFLSYLHMGVPDGTPSQAEYDDLERFFDAELRAIAAHVLFPVGARATKYVLENYTAQAR 126 Query: 211 QN---LGKWSNLCTPHSIIPTLATVHP 234 + + + S L P Sbjct: 127 KISVEMEELHGQEVRGSGFLVLPIADP 153 >gi|257066671|ref|YP_003152927.1| Uracil-DNA glycosylase superfamily [Anaerococcus prevotii DSM 20548] gi|256798551|gb|ACV29206.1| Uracil-DNA glycosylase superfamily [Anaerococcus prevotii DSM 20548] Length = 190 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 54/159 (33%), Gaps = 17/159 (10%) Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL 166 ++IIG P +G F+ K+G L L I++ I P Sbjct: 33 DSKILIIGQAPGKRVEETGILFNDKSGERLVDWL-GIDMKTLHGGDFSIIPMDFYYPGKG 91 Query: 167 SNIEMEICRPIIMRQIE------LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220 + + + R I ++ L + ++ + IG ++ F+ ++ +K K Sbjct: 92 KSGD-KAPRRFIAKEYHPYLLENLKNIELTILIGAYSQKFYLKDNFKKNLTETVKSFEDY 150 Query: 221 TPHSIIPTLATVHPQEL-----IQYPLIKKNTWHALITL 254 P VHP L + P +K L L Sbjct: 151 LP----KYFPLVHPSPLNNRWMAKNPFFEKEVLPDLRNL 185 >gi|76788183|ref|YP_329917.1| hypothetical protein SAK_1304 [Streptococcus agalactiae A909] gi|77405404|ref|ZP_00782498.1| Unknown [Streptococcus agalactiae H36B] gi|77412792|ref|ZP_00788997.1| Unknown [Streptococcus agalactiae 515] gi|76563240|gb|ABA45824.1| uracil DNA glycosylase family protein [Streptococcus agalactiae A909] gi|77161088|gb|EAO72194.1| Unknown [Streptococcus agalactiae 515] gi|77175986|gb|EAO78761.1| Unknown [Streptococcus agalactiae H36B] gi|319745206|gb|EFV97525.1| uracil DNA glycosylase [Streptococcus agalactiae ATCC 13813] Length = 194 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 59/161 (36%), Gaps = 16/161 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPP 161 + + I+G P + + K+G+ L + L + + + + ++P Sbjct: 32 PKTARINIVGQAPGLKTQEARLYWKDKSGDRLRQWLGVDEETFYHSGKFAVLPLDFYYPG 91 Query: 162 GNR--NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSN 218 + +L + + + E+ + ++ L +G + ++ + A K + + + + Sbjct: 92 KGKSGDLPPRKGFAEKWHPLILKEMPNVQLTLLVGQYAQKYYLGSSAHKNLTETVKAYKD 151 Query: 219 LCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITL 254 + L VHP L + P +K+ L + Sbjct: 152 YLPDY-----LPLVHPSPRNQIWLKKNPWFEKDLIVDLQKI 187 >gi|187928293|ref|YP_001898780.1| Uracil-DNA glycosylase superfamily protein [Ralstonia pickettii 12J] gi|187725183|gb|ACD26348.1| Uracil-DNA glycosylase superfamily [Ralstonia pickettii 12J] Length = 205 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 30/175 (17%), Positives = 56/175 (32%), Gaps = 13/175 (7%) Query: 84 LRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 +R+ +C L + A ++IIG P + +G P++ ++G+ L + LQ Sbjct: 20 IRACRECKGALAHEPRPVVVAD--RRARVLIIGQAPGRIVHETGIPWNDRSGDRLRQWLQ 77 Query: 142 ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNK 196 +I + + P N C P R + P K+ L +G Sbjct: 78 ISYDDFYADRRIAVVPMGFCFPGTGANGDLPPRPECAPRWHRPLLTAMPDVKLALLVGTY 137 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTWHA 250 + + + + + L HP + K N W Sbjct: 138 AQRNYLDV-PRDWSLTDVVRNGPVQDADGRVLLPLPHPSP--RNLAWFKHNPWFD 189 >gi|24379662|ref|NP_721617.1| hypothetical protein SMU.1238c [Streptococcus mutans UA159] gi|24377617|gb|AAN58923.1|AE014960_4 conserved hypothetical protein [Streptococcus mutans UA159] Length = 195 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 22/206 (10%), Positives = 60/206 (29%), Gaps = 40/206 (19%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQ--------DLMIIGYTPSDSDNISGKP 127 SL E+ + + S + + + + I+G P S Sbjct: 3 SLEEITKAIMA--------DSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLY 54 Query: 128 FSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP 187 ++ K+G+ L + + + P + ++ + + P Sbjct: 55 WNDKSGDRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQK---WHQP 111 Query: 188 --------KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII--PTLATVHPQ-- 235 ++ + IGN + ++ + + K ++ + VHP Sbjct: 112 ILDLLPDIQLTILIGNYAQKYYLHQKSSV------KLTDTVAHYKKYLPDYFPLVHPSPR 165 Query: 236 ---ELIQYPLIKKNTWHALITLKKAL 258 + ++P + L + + + Sbjct: 166 NQIWMSRHPWFEAQVVPDLKKIIQQI 191 >gi|229492045|ref|ZP_04385859.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229321069|gb|EEN86876.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length = 205 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 27/207 (13%), Positives = 58/207 (28%), Gaps = 14/207 (6%) Query: 64 VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123 + + L EL +R C L +IG P + Sbjct: 2 LASTPEMGNMPEPLAELLREIRGCTLCADHLPCGPRPVLQAGPSARLRVIGQAPGRKVHT 61 Query: 124 SGKPFSGKTGNMLDKMLQSIEIMRTQIH---ISMISPWHPPGNRNLSNIEMEICRPIIMR 180 +G P+ +G+ L L + + +P R+ C Sbjct: 62 TGVPWDDPSGDCLRAWLGLTPTQFYDPDTVAVMSMGFCYPGKARSGDKPPRSECASHWHG 121 Query: 181 QIELI--SPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237 + ++ + +G + + + + + L HP Sbjct: 122 ALNDRLLDVRLTVLVGQYAQAHYLRGRRKPTLTETVKAAKDYLPLGY----LPLPHPSP- 176 Query: 238 IQYPLIKKNTW--HALI-TLKKALKNL 261 P + KN W ++ ++ A+++L Sbjct: 177 RNQPWLAKNLWFEEDVLPIVQTAIRSL 203 >gi|167576890|ref|ZP_02369764.1| Uracil DNA glycosylase superfamily superfamily protein [Burkholderia thailandensis TXDOH] Length = 175 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 56/167 (33%), Gaps = 17/167 (10%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPP 161 ++I+G P + SG P+ +G L + L + + I + +P Sbjct: 4 DPRARILIVGQAPGARVHASGIPWDDASGKRLREWLNVDDATFYDESLFAIVPMGFCYPG 63 Query: 162 GNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQKT-YQNLGKWSN 218 + N C P+ + ++ P ++ L IG + F + + + + W Sbjct: 64 RGASGDNPPRPECAPLWLDKLLGELPDIRLTLLIGQYAQRRFLGARRKSSLTETVRAWPE 123 Query: 219 LCTPHSIIPTLATVHPQELIQYPLI-KKNTW---HALITLKKALKNL 261 + HP + K++ W L L+ + L Sbjct: 124 Y-----GPEFIPLPHPSP--RNQGWLKQHPWFEAEVLPALRGKVAEL 163 >gi|283956369|ref|ZP_06373849.1| hypothetical protein C1336_000250140 [Campylobacter jejuni subsp. jejuni 1336] gi|283792089|gb|EFC30878.1| hypothetical protein C1336_000250140 [Campylobacter jejuni subsp. jejuni 1336] Length = 194 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 59/162 (36%), Gaps = 10/162 (6%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 ++ + ELK L+ S C T ++ + + L+I+ S+N SG + K Sbjct: 24 EQVQNFQELKQLVSSCTLCQFSKTRKFSLMEPKIKNAKLLILDVFGQKSENESGILLNSK 83 Query: 132 TGNMLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 G L + Q + + + S + G + + ++ C P +++LI P L Sbjct: 84 KGKKLKHYIYQILGLCDEDFYFSYLFKCFCNGKFDDFS--LQSCLPFFWNELKLIQPAFL 141 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATV 232 L +G T + + G+ + + Sbjct: 142 LCLGEYTFKSL---GFKDYHILKGEVFAY----KNFFIMPSY 176 >gi|313675477|ref|YP_004053473.1| uracil-DNA glycosylase superfamily [Marivirga tractuosa DSM 4126] gi|312942175|gb|ADR21365.1| Uracil-DNA glycosylase superfamily [Marivirga tractuosa DSM 4126] Length = 189 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 35/196 (17%), Positives = 74/196 (37%), Gaps = 23/196 (11%) Query: 79 ELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 +L +R+ +C L + + A + + IIG P + + SG P+ K+G+ L Sbjct: 3 DLLHDIRNCTECLADLPMGANPIVQA--SSQSKIAIIGQAPGIAVHQSGIPWDDKSGDNL 60 Query: 137 DKMLQSIEIMRTQIHISMISP---WHPPGNRNLSNIEMEICRPIIMRQIELIS--PKILL 191 L + + + P +P ++ M+IC P+ +++ K+ L Sbjct: 61 RNWLGVDKNQFYDEEVFALIPMGLCYPGTGKSGDLAPMKICAPLWHKRLFQAMTEVKLTL 120 Query: 192 FIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKK 245 +G + F+ A+ + + + + + +P HP + P K Sbjct: 121 LLGKYAQGFYLGKQAKSSLTKTVQSFEEYRPEYLPLP-----HPSPRNNIWQSKNPWFKA 175 Query: 246 NTWHALITLKKALKNL 261 L LK + ++ Sbjct: 176 EV---LPYLKSRISDI 188 >gi|312862896|ref|ZP_07723136.1| uracil-DNA glycosylase family protein [Streptococcus vestibularis F0396] gi|322516723|ref|ZP_08069632.1| uracil DNA glycosylase [Streptococcus vestibularis ATCC 49124] gi|311101756|gb|EFQ59959.1| uracil-DNA glycosylase family protein [Streptococcus vestibularis F0396] gi|322124756|gb|EFX96194.1| uracil DNA glycosylase [Streptococcus vestibularis ATCC 49124] Length = 194 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 23/196 (11%), Positives = 61/196 (31%), Gaps = 18/196 (9%) Query: 75 CSLHELKSLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 +L EL + + + + + + I+G P SG ++ +G Sbjct: 2 ETLEELTQAIMDDEQNKTYTEQGIKPLFSI-PKTARINIVGQAPGIRAQESGLYWNDPSG 60 Query: 134 NMLDKMLQSIEIMRTQIHISMISP--WHPPGNRNLSNIEMEICRPIIMRQIE---LISPK 188 + L + + + I P ++ PG+ ++ + + + Sbjct: 61 DNLRDWMGVSREDFYESGMFAIVPMDFYFPGHGKSGDLPPRKGFADKWHERVLDLAPNIQ 120 Query: 189 ILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPL 242 + + +GN + ++ + + + + + + VHP + P Sbjct: 121 LTILVGNYAQRYYLHQKSSAKLTDTVKHYKDYLPDY-----FPLVHPSPRNNIWQAKNPW 175 Query: 243 IKKNTWHALITLKKAL 258 K L L + + Sbjct: 176 FMKEVVPDLKALVQKI 191 >gi|218667930|ref|YP_002425010.1| hypothetical protein AFE_0518 [Acidithiobacillus ferrooxidans ATCC 23270] gi|218520143|gb|ACK80729.1| conserved hypothetical protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 197 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 59/197 (29%), Gaps = 25/197 (12%) Query: 80 LKSLLRSFHDCHLCST----SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 L LL +C LC+ + ++I P + +G PF+ +G+ Sbjct: 6 LAMLLTRVRECELCAGHLPLGARPVL-QMDSRARILIAAQAPGRKVHETGIPFNDASGDR 64 Query: 136 LDKML---QSIEIMRTQIHISMISPWHPPGNR--NLSNIEMEICRPIIMRQIELISPKIL 190 L L + + Q+ + + +P +L L ++ Sbjct: 65 LRAWLGISREVFYDARQVALVPMGFCYPGTGTSGDLPPRPECARAWHGELLPHLQHLQLT 124 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKK 245 L IG + + +A + + W + HP L + P Sbjct: 125 LVIGQYARAYHLPAEAGTLTEVVHAWRENWPNR-----IPLPHPSPRNNLWLKRNPW--- 176 Query: 246 NTWHALI-TLKKALKNL 261 LI L+ + + Sbjct: 177 -FEEDLIPMLQARVAEV 192 >gi|83311349|ref|YP_421613.1| Uracil-DNA glycosylase [Magnetospirillum magneticum AMB-1] gi|82946190|dbj|BAE51054.1| Uracil-DNA glycosylase [Magnetospirillum magneticum AMB-1] Length = 211 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 23/169 (13%), Positives = 50/169 (29%), Gaps = 32/169 (18%) Query: 85 RSFHDCHL-----CSTSLS-------TICATQTEGQDLMIIGYTPS-DSDNISGKPFSGK 131 C + + + + L+++G P N +G+PF+G Sbjct: 8 ADCGLCPRLAEFRRANRVQFPGWHHDPVPSFGGLEAPLLVVGLAPGLKGANRTGRPFTGD 67 Query: 132 T-GNMLDKMLQSIEIMRTQ-------------IHISMISPWHPPGNRNLSNIEMEICRPI 177 G++L L + R + I+ + PP E CRP Sbjct: 68 YAGDLLYSTLIRYGLARGEYRAAADDGLELVGCRITNAARCVPP-ANKPLPAEFAACRPF 126 Query: 178 IMRQI-ELISPKILLFIGNKTKNFF---FNNDAQKTYQNLGKWSNLCTP 222 + +I + + + + +G ++ + + L Sbjct: 127 LAAEIAAMPNLRGIFCLGRESHDQVLSTLGVRKAANPFGHARLHALPGG 175 >gi|160872013|ref|ZP_02062145.1| uracil DNA glycosylase superfamily [Rickettsiella grylli] gi|159120812|gb|EDP46150.1| uracil DNA glycosylase superfamily [Rickettsiella grylli] Length = 195 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 63/184 (34%), Gaps = 21/184 (11%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICA-----TQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 +++L L+++ +C C + L+I+G P + +G P++ Sbjct: 1 MNKLLPLIKNIRNCQRC--ATDLPFNPKPILQAHHLSRLLIVGQAPGVRVHKTGIPWNDP 58 Query: 132 TGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR--QIELIS 186 +G+ L + + QI I + +P + C + L + Sbjct: 59 SGDRLRHWMNVDKKTFYDIRQIAIIPMGFCYPGKGPLGDLPPRKECAHFWLDKLLAGLPN 118 Query: 187 PKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-K 244 ++ L IG + ++ + + Q + + + + HP + K Sbjct: 119 IQLTLLIGQYAQRYYLDKQVKANLTQTVASFEDYLPIY-----FPLPHPSP--RNNRWLK 171 Query: 245 KNTW 248 KN W Sbjct: 172 KNPW 175 >gi|240850190|ref|YP_002971583.1| uracil-DNA glycosylase family protein [Bartonella grahamii as4aup] gi|240267313|gb|ACS50901.1| uracil-DNA glycosylase family protein [Bartonella grahamii as4aup] Length = 226 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 44/151 (29%), Gaps = 22/151 (14%) Query: 101 CATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEIMRTQIH------- 151 + L+I+G P N +G+PF+G G++L L+ + Sbjct: 50 PYKGADTTRLLIVGLAPGLRGANRTGRPFTGDYAGHLLYSTLKKFGFAQGTFEERADDTL 109 Query: 152 ------ISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FF 202 I PP N+ L K ++ +G + Sbjct: 110 ELIDAAIVNSVRCVPPENKPTGAEINTCRYFFSPLLTNLPKLKAVITLGTIAHHSTIRAL 169 Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 N G+ +N+ + ++ H Sbjct: 170 NAKVLAHPFGHGEINNI----GRLRIFSSYH 196 >gi|198282813|ref|YP_002219134.1| Uracil-DNA glycosylase superfamily [Acidithiobacillus ferrooxidans ATCC 53993] gi|198247334|gb|ACH82927.1| Uracil-DNA glycosylase superfamily [Acidithiobacillus ferrooxidans ATCC 53993] Length = 202 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 59/197 (29%), Gaps = 25/197 (12%) Query: 80 LKSLLRSFHDCHLCST----SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 L LL +C LC+ + ++I P + +G PF+ +G+ Sbjct: 11 LAMLLTRVRECELCAGHLPLGARPVL-QMDSRARILIAAQAPGRKVHETGIPFNDASGDR 69 Query: 136 LDKML---QSIEIMRTQIHISMISPWHPPGNR--NLSNIEMEICRPIIMRQIELISPKIL 190 L L + + Q+ + + +P +L L ++ Sbjct: 70 LRAWLGISREVFYDARQVALVPMGFCYPGTGTSGDLPPRPECARAWHGELLPHLQHLQLT 129 Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKK 245 L IG + + +A + + W + HP L + P Sbjct: 130 LVIGQYARAYHLPAEAGTLTEVVHAWRENWPNR-----IPLPHPSPRNNLWLKRNPW--- 181 Query: 246 NTWHALI-TLKKALKNL 261 LI L+ + + Sbjct: 182 -FEEDLIPMLQARVAEV 197 >gi|241662866|ref|YP_002981226.1| Uracil-DNA glycosylase superfamily protein [Ralstonia pickettii 12D] gi|240864893|gb|ACS62554.1| Uracil-DNA glycosylase superfamily [Ralstonia pickettii 12D] Length = 205 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 55/175 (31%), Gaps = 13/175 (7%) Query: 84 LRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 +R+ +C L + A ++IIG P + +G P++ ++G+ L + LQ Sbjct: 20 IRACRECKGALAHEPRPVVVAD--RRARVLIIGQAPGRIVHETGIPWNDRSGDRLRQWLQ 77 Query: 142 ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNK 196 +I + + P N C P R + P ++ L +G Sbjct: 78 ISYDDFYADRRIAVVPMGFCFPGTGANGDLPPRPECAPRWHRPLLTAMPEVRLTLLVGTY 137 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTWHA 250 + + + + + HP + K N W Sbjct: 138 AQRNYLDV-PRDWTLTDVVRNGPAHDADGRVLFPLPHPSP--RNLAWFKHNPWFD 189 >gi|116627855|ref|YP_820474.1| hypothetical protein STER_1082 [Streptococcus thermophilus LMD-9] gi|116101132|gb|ABJ66278.1| Uracil-DNA glycosylase [Streptococcus thermophilus LMD-9] Length = 194 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 21/196 (10%), Positives = 57/196 (29%), Gaps = 18/196 (9%) Query: 75 CSLHELKSLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 +L EL + + + + + + + I+G P SG ++ +G Sbjct: 2 ETLEELTQAIMADEQNKTYTEQGIKPLFSI-PKTARINIVGQAPGIRAQESGLYWNDPSG 60 Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLS-----NIEMEICRPIIMRQIELISPK 188 + L + + + I P + + + + Sbjct: 61 DNLRDWMGVSREEFYESGLFAIVPMDFYFPGQGKSGDLGPRKGFADKWHERVLDLAPNIQ 120 Query: 189 ILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPL 242 + + +GN ++++ + + + + + + VHP + P Sbjct: 121 LTILVGNYAQHYYLHQKSSTKLTDTVKHYRDYLPDY-----FPLVHPSPRNNIWQAKNPW 175 Query: 243 IKKNTWHALITLKKAL 258 K L L + + Sbjct: 176 FMKEVLPDLKELVQKI 191 >gi|309782208|ref|ZP_07676937.1| NLP/P60 family protein [Ralstonia sp. 5_7_47FAA] gi|308918979|gb|EFP64647.1| NLP/P60 family protein [Ralstonia sp. 5_7_47FAA] Length = 205 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 60/188 (31%), Gaps = 16/188 (8%) Query: 84 LRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 +R+ +C L + A ++IIG P + +G P++ ++G+ L + LQ Sbjct: 20 IRACRECKGALAHEPRPVVVAD--RRARVLIIGQAPGRIVHETGIPWNDRSGDRLRQWLQ 77 Query: 142 ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNK 196 +I + + P N C P R + P ++ L +G Sbjct: 78 ISYDDFYADRRIAVVPMGFCFPGTGANGDLPPRPECAPRWHRPLLTAMPEVRLALLVGTY 137 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTWHA---LI 252 + + + + + HP + K N W + Sbjct: 138 AQRNYLDV-PRDWTLTDVVRNGPAHDADGRVLFPLPHPSP--RNLAWFKHNPWFDAHIVP 194 Query: 253 TLKKALKN 260 L+ AL Sbjct: 195 ALRAALAE 202 >gi|15673799|ref|NP_267974.1| hypothetical protein L68066 [Lactococcus lactis subsp. lactis Il1403] gi|12724845|gb|AAK05915.1|AE006412_2 hypothetical protein L68066 [Lactococcus lactis subsp. lactis Il1403] Length = 193 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 49/167 (29%), Gaps = 17/167 (10%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + IIG P S ++ +G+ L L + + I P Sbjct: 32 HKEAKICIIGQAPGIRAQESRLFWNDPSGDRLRDWLGIDRTTFYESNKISILPLDFYFPG 91 Query: 165 NLSNIEMEICRPI---IMRQIELISPKI--LLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + ++ + + P+I + +G+ ++ N + + Sbjct: 92 KGKSGDLPPRAGFAQKWHKALLEEMPEIELFILVGSYAIKYYLNLKSSAKTTEVIHDFEA 151 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKNL 261 P VHP L + P + L LKK + L Sbjct: 152 YLP----KYFPIVHPSPRNNMWLAKNPWFEPEL---LPELKKRVAQL 191 >gi|85711552|ref|ZP_01042610.1| Uracil-DNA glycosylase [Idiomarina baltica OS145] gi|85694704|gb|EAQ32644.1| Uracil-DNA glycosylase [Idiomarina baltica OS145] Length = 201 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 58/197 (29%), Gaps = 26/197 (13%) Query: 77 LHELKSLLRSFHDCHLCS-----TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 + ++ ++ +C LC + I ++I G P + SGKPF Sbjct: 1 MSAWQTTVQHVRNCSLCEPKLPLGARPVI--QFHPHARILIAGQAPGIRVHRSGKPFDDP 58 Query: 132 TGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP- 187 +G L L +S Q I + +P + C Q+ P Sbjct: 59 SGERLRAWLGVDKSDFYDARQFAILPMGFCYPGTTSSGDAPPRPECADAWREQLLEQLPH 118 Query: 188 -KILLFIGNKTKNF----FFNNDAQKTYQNLGK-WSNLCTPHSIIPTLATVHPQ-----E 236 ++ L IG + + Q+T K W L HP Sbjct: 119 LQLTLAIGQYAQQWHAQQLTGIKLQRTLTERVKNWQAWLEQG----ILPLPHPSPRNNRW 174 Query: 237 LIQYPLIKKNTWHALIT 253 L + P + L Sbjct: 175 LAKNPWFEDEVLPELKA 191 >gi|149204661|ref|ZP_01881626.1| hypothetical protein RTM1035_09753 [Roseovarius sp. TM1035] gi|149141920|gb|EDM29970.1| hypothetical protein RTM1035_09753 [Roseovarius sp. TM1035] Length = 211 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 70/205 (34%), Gaps = 16/205 (7%) Query: 66 QADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISG 125 A + + +L++ + + C + G ++I+G P +++G Sbjct: 2 PASRPDKTRSEIEKLQAEITACSVCSDLPLGPRPLFQIG-AGVRILIVGQAPGRRAHLAG 60 Query: 126 KPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQI 182 + F +G L L ++ +I I + P R+ C P+ ++ Sbjct: 61 RLFDDASGVRLRNWLGLDEATFRDPEKIAILPMGFCFPGTGRSGDLPPRPECAPLWRARV 120 Query: 183 ELISPKIL--LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 + P I+ + IG +++ ++ + T L HP + Sbjct: 121 MALLPDIMLTVVIGRHAQSWHLPEISRLPLAE--AMRDWPTCWPASILLP--HPSP--RN 174 Query: 241 PLI-KKNTW--HALI-TLKKALKNL 261 ++N W L+ L+ + L Sbjct: 175 MGWFQRNVWFETDLLPVLRARVIKL 199 >gi|75676116|ref|YP_318537.1| uracil-DNA glycosylase superfamily protein [Nitrobacter winogradskyi Nb-255] gi|74420986|gb|ABA05185.1| uracil-DNA glycosylase superfamily [Nitrobacter winogradskyi Nb-255] Length = 225 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 22/146 (15%), Positives = 40/146 (27%), Gaps = 30/146 (20%) Query: 88 HDCHLCST--------SLS-------TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131 DC LC + + ++I+G P N +G+PF+G Sbjct: 21 RDCPLCPRLVDYRLAVRTREPEWFNAPVPSFGEPDSAVLIVGLAPGVQGANRTGRPFTGD 80 Query: 132 T-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177 G++L L IS PP N+ L + Sbjct: 81 YAGDLLYATLLKYGFAAGRYQARPDDGLKLIDCRISNAVRCVPPQNKPLPAEINTCRAFL 140 Query: 178 IMRQIELISPKILLFIGNKTKNFFFN 203 + + ++ +G + Sbjct: 141 SATLAAMPRLQAVVALGRVAHDSAVK 166 >gi|306845249|ref|ZP_07477825.1| uracil-DNA glycosylase superfamily protein [Brucella sp. BO1] gi|306274408|gb|EFM56215.1| uracil-DNA glycosylase superfamily protein [Brucella sp. BO1] Length = 223 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 22/181 (12%), Positives = 46/181 (25%), Gaps = 37/181 (20%) Query: 86 SFHDCHL--------------CSTSLSTICATQ-TEGQDLMIIGYTPSDSD-NISGKPFS 129 + C + E L+I+G P N +G+PF+ Sbjct: 8 NCSICPRLHAFLQEWRQKEPAWHNAPVPPFLPGSDEDVRLLIVGLAPGLRGANRTGRPFT 67 Query: 130 GKT-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICR 175 G G +L L I PP N+ + + + Sbjct: 68 GDYAGELLYSTLCEFGFATGKFEARPDDSLRLLDACIVNAVRCVPPENKPVGSEINNCRQ 127 Query: 176 PIIMRQIELISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATV 232 + + ++ +G + GK +++ + ++ Sbjct: 128 FLTPMLTRFPNLDAVVTLGTIAHQSTVRALGVPVSRHPFGHGKTTDI----GPLRIFSSY 183 Query: 233 H 233 H Sbjct: 184 H 184 >gi|300741850|ref|ZP_07071871.1| uracil DNA glycosylase family protein [Rothia dentocariosa M567] gi|300381035|gb|EFJ77597.1| uracil DNA glycosylase family protein [Rothia dentocariosa M567] Length = 201 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 18/167 (10%), Positives = 48/167 (28%), Gaps = 15/167 (8%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + ++++G P + P++ +G +L L + + + P Sbjct: 35 SARSRIILVGQAPGRIAQETRIPWNDVSGRLLRTWLSVSDDEFYNPELFALMPMDFYYPG 94 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + R + + ++ + +G + ++ D + + Sbjct: 95 KGKHGDLPPRKDFAPRWHPRLRAMMPHAQLTILVGAYAQKYYL--DGVSAPRLRSNLTET 152 Query: 220 CTPHSIIP--TLATVHPQEL-----IQYPLIKKNTWHALIT-LKKAL 258 + VHP L + P + L ++K L Sbjct: 153 VAHAEDYLPGFVPLVHPSPLNIGWRKRNPWFEAENIPDLRERVRKIL 199 >gi|261855091|ref|YP_003262374.1| hypothetical protein Hneap_0471 [Halothiobacillus neapolitanus c2] gi|261835560|gb|ACX95327.1| conserved hypothetical protein [Halothiobacillus neapolitanus c2] Length = 193 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 56/184 (30%), Gaps = 29/184 (15%) Query: 80 LKSLLRSFHDCHLCSTSLSTICA-----TQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L +R+ C + + L+I G P + SG PF +G+ Sbjct: 7 LIDEVRACRICQ-----DNLPFPPRPILQFSPSARLLIAGQAPGKKAHQSGVPFDDASGD 61 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIELISP 187 L L ++ + + + P G+ R ++ L Sbjct: 62 RLRGWLGLSRAQFYDEQTVALLPMGFCFPGTGTSGDLPPRPECAPAWRSALLD--ALTHL 119 Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPL 242 + + IG + + F Q + + W ++P HP L + P Sbjct: 120 EFTIVIGRYAQAYHFGTRRQSLTEQVQAWREHWPEKVLLP-----HPSPRNQLWLKRNPW 174 Query: 243 IKKN 246 +++ Sbjct: 175 FERD 178 >gi|326318085|ref|YP_004235757.1| Uracil-DNA glycosylase superfamily [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374921|gb|ADX47190.1| Uracil-DNA glycosylase superfamily [Acidovorax avenae subsp. avenae ATCC 19860] Length = 199 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 59/185 (31%), Gaps = 16/185 (8%) Query: 74 ACSLHELKSLLRSFHDCHLCSTSL----STICATQTEGQDLMIIGYTPSDSDNISGKPFS 129 L +L LLRS C LC+ SL + + G ++I G P + SG PF Sbjct: 2 PRPLPDLAPLLRSVRSCTLCAGSLPLGPRPVL-QASAGARILIAGQAPGRKVHASGIPFD 60 Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186 +G L + + +I I + +P R+ C + + Sbjct: 61 DVSGERLRDWMGVDRETFYDPGRIAIVPMGFCYPGTGRSGDLPPRPECAATWRKPLLDAL 120 Query: 187 P--KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI- 243 P ++ + +G + + + L HP + Sbjct: 121 PGIRLTIVLGAYALAWHVRRTPAPLSLT-DAVQDWRRGAPGLWVLP--HPSP--RNNGWL 175 Query: 244 KKNTW 248 K++ W Sbjct: 176 KRHPW 180 >gi|316934151|ref|YP_004109133.1| Uracil-DNA glycosylase superfamily [Rhodopseudomonas palustris DX-1] gi|315601865|gb|ADU44400.1| Uracil-DNA glycosylase superfamily [Rhodopseudomonas palustris DX-1] Length = 224 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 48/179 (26%), Gaps = 37/179 (20%) Query: 88 HDCHLC--------STSLS-------TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131 DC LC + + L+I+G P N +G+PF+G Sbjct: 21 RDCPLCPRLAEFRSEARAREPGWFNAPVSSFGGTDASLLIVGLAPGLQGANRTGRPFTGD 80 Query: 132 T-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177 G++L L IS PP N+ L R + Sbjct: 81 YAGDLLYATLIEYGFASGQYQARPDDSLRLVGCRISNAVRCVPPQNKPLPVEINTCRRFL 140 Query: 178 IMRQIELISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 I + + ++ +G + A + G + + H Sbjct: 141 IATIDAMPKLRAIVLLGRIAHDSTLKALGLRAAQAPFGHGAVHEA----GRLRLYDSYH 195 >gi|148560230|ref|YP_001258634.1| uracil-DNA glycosylase superfamily protein [Brucella ovis ATCC 25840] gi|148371487|gb|ABQ61466.1| uracil-DNA glycosylase superfamily [Brucella ovis ATCC 25840] Length = 223 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 43/147 (29%), Gaps = 22/147 (14%) Query: 105 TEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEI-------------MRTQ 149 E L+I+G P N +G+PF+G G +L L Sbjct: 42 DEDVRLLIVGLAPGLRGANRTGRPFTGDYAGELLYSTLCEFGFATGKFEARPDDSLRLLD 101 Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FFNNDA 206 I PP N+ + + + + + ++ +G Sbjct: 102 ACIVNAVRCVPPENKPVGSEINNCRQFLTPMLTHFPNLDAVVTLGTIAHQSTVRALGVPV 161 Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVH 233 + GK +++ + ++ H Sbjct: 162 SRHPFGHGKATDI----GPLRIFSSYH 184 >gi|108563060|ref|YP_627376.1| hypothetical protein HPAG1_0635 [Helicobacter pylori HPAG1] gi|107836833|gb|ABF84702.1| hypothetical protein HPAG1_0635 [Helicobacter pylori HPAG1] Length = 209 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 23/184 (12%), Positives = 55/184 (29%), Gaps = 13/184 (7%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 ++ + + + C S + L I TP + + ML+ Sbjct: 37 KQVHEGIENCNLCKRHQHSK-PVIGLFNPTSKLAFITLTP--MLDSQLNFLNNLKAAMLE 93 Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++Q I + N E+ C ++ Q++ + K+++ G Sbjct: 94 SIIQKVFNYPLKDCSILSLLKC--DSNSLNLEEEINACLFHLIWQLDNSASKVIVVFGEI 151 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 N +++ L+T +++++ P +KK + Sbjct: 152 LPKRLLNLSKEES-------FGCIVSLKTKHFLSTHALEDMLKNPTLKKEALAHFKIALQ 204 Query: 257 ALKN 260 L Sbjct: 205 FLNQ 208 >gi|296115128|ref|ZP_06833769.1| hypothetical protein GXY_05086 [Gluconacetobacter hansenii ATCC 23769] gi|295978229|gb|EFG84966.1| hypothetical protein GXY_05086 [Gluconacetobacter hansenii ATCC 23769] Length = 196 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 21/184 (11%), Positives = 50/184 (27%), Gaps = 30/184 (16%) Query: 79 ELKSLLRSFHDCHLCSTSLSTICATQT-------EGQDLMIIGYTPSDSDNISGKPFSGK 131 L+ L+ C C+ + ++I P + +G+ F+ Sbjct: 9 ALERLVTEIRACTTCAN----VLPLGPRPILHVSPTARILIASQAPGTRVHETGQSFNDA 64 Query: 132 TGNMLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEICRPIIMRQIELI 185 +G+ L L ++ +I I + P + + Sbjct: 65 SGDRLRGWLGIDRATFYDSARIAIMPMGMCYPGRLPKGGDCPPRRECAPLWRERVLALMP 124 Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII--PTLATVHPQELIQYPLI 243 ++ L +G+ +N GK + + HP + Sbjct: 125 DIRLTLLVGSYAQNHVLGP---------GKVEDRVRHYRDYLPRFFPLPHPSW--RTGAW 173 Query: 244 KKNT 247 ++ + Sbjct: 174 ERRS 177 >gi|114707278|ref|ZP_01440175.1| hypothetical protein FP2506_03630 [Fulvimarina pelagi HTCC2506] gi|114537159|gb|EAU40286.1| hypothetical protein FP2506_03630 [Fulvimarina pelagi HTCC2506] Length = 212 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 26/202 (12%), Positives = 64/202 (31%), Gaps = 23/202 (11%) Query: 79 ELKSLLRSFHDC-------HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 L+ ++ + C L + + A +++ G P + + + KPF+ Sbjct: 13 ALQRIIETCRICAENPIGEPL-PIEPNPVLALSDT-ARILVAGQAPGNLADKTSKPFNDP 70 Query: 132 TGNMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRN---LSNIEMEICRPIIMRQIELI 185 +G L + + T++ I + P + + + Sbjct: 71 SGIRLRDWMGIGPELFYDSTRVAILPMGFCFPGYDAKGGDKPPRKECRLTWHERAMAAMP 130 Query: 186 SPKILLFIGNKTKN-FFFNNDAQKTYQNLGKWSNLCTPHSII-PTLATVHPQELIQYPLI 243 +++L IG ++ + + + W ++ + HP + Sbjct: 131 QIELVLAIGAYAQSFHIAKGRGRTLTETVMNWRDILAGGGKYAAVIPLPHPSW--RNNGW 188 Query: 244 -KKNTW--HALI-TLKKALKNL 261 +KN W L+ L+ + L Sbjct: 189 LRKNPWFGEDLLPELRTQVARL 210 >gi|281492430|ref|YP_003354410.1| uracil DNA glycosylase superfamily protein [Lactococcus lactis subsp. lactis KF147] gi|281376094|gb|ADA65585.1| Uracil DNA glycosylase superfamily protein [Lactococcus lactis subsp. lactis KF147] Length = 193 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 17/167 (10%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + IIG P S ++ +G+ L L + + I P Sbjct: 32 HKEAKICIIGQAPGIRAQESRLFWNDPSGDRLRDWLGIDRTTFYESNKISILPLDFYFPG 91 Query: 165 NLSNIEMEICRPI---IMRQIELISPKI--LLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + ++ + + P+I + +G+ ++ N + + + Sbjct: 92 KGKSGDLPPRAGFAQKWHKALLEEMPEIELFILVGSYAIKYYLNLKSSAKTTEVIRDFEA 151 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKNL 261 P VHP L + P + L LKK + L Sbjct: 152 YLP----KYFPLVHPSPRNNMWLAKNPWFEPEL---LPELKKRVAQL 191 >gi|319408275|emb|CBI81928.1| conserved hypothetical protein [Bartonella schoenbuchensis R1] Length = 226 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 44/151 (29%), Gaps = 22/151 (14%) Query: 101 CATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEIMRTQIH------- 151 + L+I+G P N +G+PF+G G +L L+ + Sbjct: 50 PSKGAATTRLLIVGLAPGLRGANRTGRPFTGDYAGLLLYSTLKKFGFAQGTFEERPDDSL 109 Query: 152 ------ISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FF 202 I PP N+ S L K ++ +G + Sbjct: 110 ELIDAAIVNSVRCVPPENKPTSTEINTCRYFFAPLLTNLPQLKAVITLGAIAHHSTIRAL 169 Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 N + G +N+ + ++ H Sbjct: 170 NAKVPEHPFGHGAINNI----GRLRIFSSYH 196 >gi|260459406|ref|ZP_05807661.1| conserved hypothetical protein [Mesorhizobium opportunistum WSM2075] gi|259034960|gb|EEW36216.1| conserved hypothetical protein [Mesorhizobium opportunistum WSM2075] Length = 224 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 31/202 (15%), Positives = 63/202 (31%), Gaps = 22/202 (10%) Query: 76 SLHELKSLLRSFHDC-------HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128 L + +R+ C L + + ++I P ++SG PF Sbjct: 23 ELDSFAAAVRACRICVENPIGKPL-PHEPRPVL-RPSSSARILIASQAPGTKVHLSGMPF 80 Query: 129 SGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSN-IEMEICRPIIMRQIEL 184 + +G+ L L + I + P + + C P + Sbjct: 81 TDASGDRLRNWLGVTSDEFYDTEKFAIVPMGFCFPGQDAKGGDLPPRRECAPAWRAPLMA 140 Query: 185 ISPKI--LLFIGNKTKNFFFN-NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241 + P+I +L IG +++ + + W + L HP + Sbjct: 141 LMPRIDLVLTIGIYAQSWHMGAARRPSLTETVRDWRAIWENSVGAKVLPLPHPSW--RNT 198 Query: 242 LI-KKNTWH--ALI-TLKKALK 259 K+N W L+ L+ ++ Sbjct: 199 GWLKQNPWFEMDLLPFLRSEIR 220 >gi|207091803|ref|ZP_03239590.1| hypothetical protein HpylHP_01476 [Helicobacter pylori HPKX_438_AG0C1] Length = 183 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 57/176 (32%), Gaps = 13/176 (7%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 ++ + + + C S + L I TP + S ML+ Sbjct: 20 KQVHEGIENCNLCKRHQHSK-PVIGLFNPTSKLAFITLTP--MLDSQLNFLSNLKAAMLE 76 Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++Q I + N E+ C + Q++ + K+++ G Sbjct: 77 SIIQKVFNYPLKDCSILSLLKC--DSNSLNLEEEINACLFHLTWQLDNSASKVIVVFGEI 134 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252 N ++ G+ +L T H L+T +++++ P +KK Sbjct: 135 LPKRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFK 183 >gi|311111743|ref|YP_003982965.1| uracil-DNA glycosylase [Rothia dentocariosa ATCC 17931] gi|310943237|gb|ADP39531.1| uracil-DNA glycosylase [Rothia dentocariosa ATCC 17931] Length = 201 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 18/167 (10%), Positives = 48/167 (28%), Gaps = 15/167 (8%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + ++++G P + P++ +G +L L + + + P Sbjct: 35 SARSRIILVGQAPGRIAQETRIPWNDVSGRLLRTWLSVSDDEFYNPELFALMPMDFYYPG 94 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + R + + ++ + +G + ++ D + + Sbjct: 95 KGKHGDLPPRKDFAPRWHPRLRAMMPHAQLTILVGAYAQKYYL--DGVSAPRLRSNLTET 152 Query: 220 CTPHSIIP--TLATVHPQEL-----IQYPLIKKNTWHALIT-LKKAL 258 + VHP L + P + L ++K L Sbjct: 153 VAHAEDYLPGFVPLVHPSPLNIGWRKRNPWFEAENIPDLRERVRKIL 199 >gi|254718791|ref|ZP_05180602.1| Uracil-DNA glycosylase superfamily protein [Brucella sp. 83/13] gi|265983771|ref|ZP_06096506.1| uracil-DNA glycosylase superfamily protein [Brucella sp. 83/13] gi|306837510|ref|ZP_07470385.1| uracil-DNA glycosylase superfamily protein [Brucella sp. NF 2653] gi|264662363|gb|EEZ32624.1| uracil-DNA glycosylase superfamily protein [Brucella sp. 83/13] gi|306407402|gb|EFM63606.1| uracil-DNA glycosylase superfamily protein [Brucella sp. NF 2653] Length = 223 Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 22/181 (12%), Positives = 48/181 (26%), Gaps = 37/181 (20%) Query: 86 SFHDCHL--------------CSTSLSTICATQ-TEGQDLMIIGYTPSDSD-NISGKPFS 129 + C + + E L+I+G P N +G+PF+ Sbjct: 8 NCSICPRLHAFLQEWRQKEPAWHNAPVPPFLSGSDEDVRLLIVGLAPGLRGANRTGRPFT 67 Query: 130 GKT-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICR 175 G G +L L I PP N+ + + + Sbjct: 68 GDYAGELLYSTLCEFGFATGKFEARPDDSLRLLDACIVNAVRCVPPENKPVGSEINNCRQ 127 Query: 176 PIIMRQIELISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATV 232 + + + ++ +G + GK +++ + ++ Sbjct: 128 FLTPMLMRFPNLDAVVTLGTIAHQSTVRALGVPVSRLPFGHGKATDI----GPLRIFSSY 183 Query: 233 H 233 H Sbjct: 184 H 184 >gi|158424988|ref|YP_001526280.1| hypothetical protein AZC_3364 [Azorhizobium caulinodans ORS 571] gi|158331877|dbj|BAF89362.1| hypothetical protein [Azorhizobium caulinodans ORS 571] Length = 232 Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 30/222 (13%), Positives = 63/222 (28%), Gaps = 23/222 (10%) Query: 60 HSPLVQQADSIAQKACSLHELKSLLRSFHDC---HLCSTSLS--TICATQTEGQDLMIIG 114 L + + L +L + +R+ C L + ++I Sbjct: 7 RPNLEAELEERGAVDPPLADLLADIRACRRCVEAPLGRPMPHEPRPVLRASSTARILIAS 66 Query: 115 YTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRN--LSNI 169 P +++G F +G+ L + + +++ QI I + P + N Sbjct: 67 QAPGTKVHLTGLTFHDASGDRLRQWMGVSRAVFYDTAQIAIVPMGFCFPGQDANGGDLPP 126 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFF----FNND---AQKTYQNLGKWSNLCTP 222 E R + L+ + + + Q + W + Sbjct: 127 RRECRATWHDRLFAALPAFDLILAIGRPAQLYHLKRLGREAQIGDSLTQTVANWRQVRAA 186 Query: 223 HSIIPTLATVHPQELIQYPLI-KKNTW--HALI-TLKKALKN 260 A HP + K+N W L+ L+ + Sbjct: 187 AERPRVYALPHPSW--RNTGWLKRNPWFEQDLLPELRADIAQ 226 >gi|170739779|ref|YP_001768434.1| uracil-DNA glycosylase superfamily protein [Methylobacterium sp. 4-46] gi|168194053|gb|ACA16000.1| Uracil-DNA glycosylase superfamily [Methylobacterium sp. 4-46] Length = 221 Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 58/153 (37%), Gaps = 28/153 (18%) Query: 75 CSLHELKSLLRSFHDCH--LCSTSLST-----------ICATQTEGQDLMIIGYTPSDSD 121 L L +R+ C L ++ + + LM++G P ++ Sbjct: 3 ADLIALDLEMRACVRCAQVLQKHPVNPPRDASPVVPRPVFS-PPMRAPLMLVGQAPGITE 61 Query: 122 NISGKPFSGKTGN-----MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE------ 170 +G PFSG+ G +D L+ E R ++ + + P N + E Sbjct: 62 YGTGTPFSGQAGGGARALFVDCGLRESEFDR-AVYQTSAAKCFPGRRLNAARWEDRPPCA 120 Query: 171 --MEICRPIIMRQIELISPKILLFIGNKTKNFF 201 ++ C + RQIE++SP +++ +G Sbjct: 121 AMLQNCGGFLRRQIEMVSPVVIVAMGGVAIKMM 153 >gi|288905133|ref|YP_003430355.1| hypothetical protein GALLO_0932 [Streptococcus gallolyticus UCN34] gi|288731859|emb|CBI13424.1| Conserved hypothetical protein [Streptococcus gallolyticus UCN34] Length = 194 Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 22/166 (13%), Positives = 48/166 (28%), Gaps = 15/166 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + I+G P SG ++ +G+ L K L + + + P Sbjct: 32 PKTARINIVGQAPGIRAQESGLYWNDPSGDNLRKWLGVDREIFYDSGLFAVVPMDYYFPG 91 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + + ++ + +G+ + ++ + T K Sbjct: 92 TGKSGDLPPRKGFAEKWHKRTLAFAPNIELHILVGSYAQRYYLQQKSSATLTETVKHYRA 151 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKALK 259 P VHP + P K L +K+ L+ Sbjct: 152 YLPE----FFPLVHPSPRNNLWQARNPWFAKEVIPDLQKYVKEILE 193 >gi|22537375|ref|NP_688226.1| hypothetical protein SAG1218 [Streptococcus agalactiae 2603V/R] gi|22534248|gb|AAN00099.1|AE014247_14 conserved hypothetical protein [Streptococcus agalactiae 2603V/R] Length = 194 Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 59/161 (36%), Gaps = 16/161 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPP 161 + + I+G P + + K+G+ L + L + + + + ++P Sbjct: 32 PKTARINIVGQAPGLKTQEARLYWKDKSGDRLRQWLGVDEETFYHSGKFAVLPLDFYYPG 91 Query: 162 GNRNLS--NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSN 218 ++ + + + E+ + ++ L +G T+ ++ + A K + + + + Sbjct: 92 KGKSGDLSPRKGFAEKWHPLILKEMPNVQLTLLVGQYTQKYYLGSSAHKNLTETVKAYKD 151 Query: 219 LCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITL 254 + L VHP L + P +K+ L + Sbjct: 152 YLPDY-----LPLVHPSPRNQIWLKKNPWFEKDLIVDLQKI 187 >gi|87119969|ref|ZP_01075865.1| hypothetical protein MED121_01975 [Marinomonas sp. MED121] gi|86164671|gb|EAQ65940.1| hypothetical protein MED121_01975 [Marinomonas sp. MED121] Length = 196 Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 72/204 (35%), Gaps = 30/204 (14%) Query: 77 LHELKSLLRSFHDCHLCST----SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 + EL L+ C LC + + + ++I G P + SG PF + Sbjct: 1 MAELIRLIEDIKACKLCEAHLEHGVRPVV-QLNKTAKILIAGQAPGRKVHTSGIPFDDAS 59 Query: 133 GNMLDKML---QSIEIMRTQIHISMISPWHP--------PGNRNLSNIEMEICRPIIMRQ 181 G+ L + + ++I I + +P G+ ++ Sbjct: 60 GDRLRAWMGIDKDTFYDDSKIAILPMGFCYPGSYKGKGKSGDLPPRPECANTWHQNVLA- 118 Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241 L +++L IG ++++ +N+ + +W + +P HP + Sbjct: 119 -LLTQVELVLVIGQYAQDYYLDNNVTV-TACVAEWEKHWPHYLPLP-----HPSP--RNN 169 Query: 242 LI-KKNTW--HALI-TLKKALKNL 261 + KNTW ++ L+ + L Sbjct: 170 IWLAKNTWFEADILPVLQSRVATL 193 >gi|154251536|ref|YP_001412360.1| uracil-DNA glycosylase superfamily protein [Parvibaculum lavamentivorans DS-1] gi|154155486|gb|ABS62703.1| Uracil-DNA glycosylase superfamily [Parvibaculum lavamentivorans DS-1] Length = 178 Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 49/149 (32%), Gaps = 15/149 (10%) Query: 108 QDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ---SIEIMRTQIHISMISPWHPPGNR 164 L I+G P + SG PF+ +G+ L + ++I I + P + Sbjct: 16 ARLCIVGQAPGTRVHASGTPFTDPSGDRLRDWMGVTPEEFYDISRIAIIPMGFCFPGLDA 75 Query: 165 NLSN-IEMEICRPIIMRQIELISPK--ILLFIGNKTKNFFFNN-DAQKTYQNLGKWSNLC 220 + C R + + P+ + L +G + + + + W Sbjct: 76 KGGDLPPRRECADHWRRDLFELMPQLELTLLVGQYAQAWHLGKARKESLTATVAAWREYL 135 Query: 221 TPHSIIPTLATVHPQELIQYPLI-KKNTW 248 H +P HP + KK+ W Sbjct: 136 PRHLPLP-----HPSW--RNNAWIKKHPW 157 >gi|306820095|ref|ZP_07453743.1| uracil DNA glycosylase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551873|gb|EFM39816.1| uracil DNA glycosylase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 196 Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 20/176 (11%), Positives = 54/176 (30%), Gaps = 35/176 (19%) Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRN 165 ++++G P S + ++ ++G L + E + + I P Sbjct: 34 TNSRILVVGQAPGIKAMESRRCWNDQSGKNLRNWMGIDEDIFYNSGLIGIVPMDFYYPGK 93 Query: 166 L-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNL 219 + + + K+++ +G+ ++N++ + +KT Q + + Sbjct: 94 GKSGDLPPRKGFAQKWHGKILEHYKNIKLIILVGSYSQNYYLGKNKKKTLTQTVQNYKEY 153 Query: 220 CTPHSIIPTLATVHPQELIQY---------------PLIKKNTWHALITLKKALKN 260 + VHP + P +K +++ L Sbjct: 154 LPTY-----FPIVHPSP--RNIIWQIKNPWFGNEVVPALK-------KEVRRILDE 195 >gi|289580314|ref|YP_003478780.1| hypothetical protein Nmag_0633 [Natrialba magadii ATCC 43099] gi|289529867|gb|ADD04218.1| conserved hypothetical protein [Natrialba magadii ATCC 43099] Length = 221 Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 24/185 (12%), Positives = 53/185 (28%), Gaps = 32/185 (17%) Query: 97 LSTICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQSIEIM-------- 146 + + D +IG P +G PF+ + GN + +L+ +I Sbjct: 35 RTAVFGYGDANADFHVIGDHPGVHGGKRTGVPFTEIENGNAIQDVLRDPDIDFASGPRDQ 94 Query: 147 --RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204 ++S + P + + ++ I+ ILL +G + + Sbjct: 95 PVLENCYLSYVHMCSLPDGHQPTASDYAELERYFDAELRAINAHILLPVGEQATDHVLRE 154 Query: 205 DAQKTYQN---LGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA------LITLK 255 + + + + + P W L TL+ Sbjct: 155 YTTQRRRIDLNMVDLHATEIRGRGFMVVPI-------RNPTE----WDDGDREAILETLR 203 Query: 256 KALKN 260 + L + Sbjct: 204 EILAS 208 >gi|325978106|ref|YP_004287822.1| Uracil-DNA glycosylase-like [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178034|emb|CBZ48078.1| Uracil-DNA glycosylase-like [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 194 Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 22/166 (13%), Positives = 48/166 (28%), Gaps = 15/166 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + I+G P SG ++ +G+ L K L + + + P Sbjct: 32 PKTARINIVGQAPGIRAQESGLYWNDPSGDNLRKWLGVDREIFYDSGLFAVVPMDYYFPG 91 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + + ++ + +G+ + ++ + T K Sbjct: 92 TGKSGDLPPRKGFAEKWHKRTLAFAPNIELHILVGSYAQRYYLQQKSSATLTETVKHYRA 151 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKALK 259 P VHP + P K L +K+ L+ Sbjct: 152 YLPE----FFPLVHPSPRNNLWQARNPWFAKEVIPDLQKHVKEILE 193 >gi|109947599|ref|YP_664827.1| hypothetical protein Hac_1064 [Helicobacter acinonychis str. Sheeba] gi|109714820|emb|CAJ99828.1| conserved hypothetical protein [Helicobacter acinonychis str. Sheeba] Length = 196 Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 26/183 (14%), Positives = 60/183 (32%), Gaps = 13/183 (7%) Query: 78 HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 ++ + + + C S + + I TP + + ML+ Sbjct: 24 KQVHEGIENCNLCKRYQHSKPIV-GLLNAQSKITFITLTP--MLDSQLNFLNNLKALMLE 80 Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++Q I + N E+ C P + Q++ + K+++ G Sbjct: 81 SIIQKVFGYSLKDCTILSLLKC--DSNSLNLEEEINACLPHLTWQLDNSASKVIIIFGQS 138 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 N ++ G+ +L T + L+T +++++ P +KK + Sbjct: 139 LPKRLLNLSK---EESFGRIVSLKTKN----FLSTYALEDMLKNPTLKKEVLTHFKIALQ 191 Query: 257 ALK 259 L Sbjct: 192 FLN 194 >gi|17987582|ref|NP_540216.1| putative cytoplasmic protein [Brucella melitensis bv. 1 str. 16M] gi|23501535|ref|NP_697662.1| phage SPO1 DNA polymerase-like protein [Brucella suis 1330] gi|62289608|ref|YP_221401.1| SPO1 DNA polymerase-like protein [Brucella abortus bv. 1 str. 9-941] gi|82699536|ref|YP_414110.1| uracil-DNA glycosylase superfamily protein [Brucella melitensis biovar Abortus 2308] gi|161618619|ref|YP_001592506.1| uracil-DNA glycosylase superfamily protein [Brucella canis ATCC 23365] gi|163842920|ref|YP_001627324.1| uracil-DNA glycosylase superfamily protein [Brucella suis ATCC 23445] gi|189023862|ref|YP_001934630.1| Uracil-DNA glycosylase superfamily [Brucella abortus S19] gi|225852169|ref|YP_002732402.1| uracil-DNA glycosylase superfamily protein [Brucella melitensis ATCC 23457] gi|237815103|ref|ZP_04594101.1| cytoplasmic protein [Brucella abortus str. 2308 A] gi|254688925|ref|ZP_05152179.1| Uracil-DNA glycosylase superfamily protein [Brucella abortus bv. 6 str. 870] gi|254693407|ref|ZP_05155235.1| Uracil-DNA glycosylase superfamily protein [Brucella abortus bv. 3 str. Tulya] gi|254697059|ref|ZP_05158887.1| Uracil-DNA glycosylase superfamily protein [Brucella abortus bv. 2 str. 86/8/59] gi|254701437|ref|ZP_05163265.1| Uracil-DNA glycosylase superfamily protein [Brucella suis bv. 5 str. 513] gi|254707642|ref|ZP_05169470.1| Uracil-DNA glycosylase superfamily protein [Brucella pinnipedialis M163/99/10] gi|254709776|ref|ZP_05171587.1| Uracil-DNA glycosylase superfamily protein [Brucella pinnipedialis B2/94] gi|254713778|ref|ZP_05175589.1| Uracil-DNA glycosylase superfamily protein [Brucella ceti M644/93/1] gi|254717165|ref|ZP_05178976.1| Uracil-DNA glycosylase superfamily protein [Brucella ceti M13/05/1] gi|254729956|ref|ZP_05188534.1| Uracil-DNA glycosylase superfamily protein [Brucella abortus bv. 4 str. 292] gi|256031266|ref|ZP_05444880.1| Uracil-DNA glycosylase superfamily protein [Brucella pinnipedialis M292/94/1] gi|256044346|ref|ZP_05447250.1| Uracil-DNA glycosylase superfamily protein [Brucella melitensis bv. 1 str. Rev.1] gi|256113189|ref|ZP_05454057.1| Uracil-DNA glycosylase superfamily protein [Brucella melitensis bv. 3 str. Ether] gi|256159376|ref|ZP_05457158.1| Uracil-DNA glycosylase superfamily protein [Brucella ceti M490/95/1] gi|256254674|ref|ZP_05460210.1| Uracil-DNA glycosylase superfamily protein [Brucella ceti B1/94] gi|256257173|ref|ZP_05462709.1| Uracil-DNA glycosylase superfamily protein [Brucella abortus bv. 9 str. C68] gi|256264319|ref|ZP_05466851.1| uracil-DNA glycosylase superfamily [Brucella melitensis bv. 2 str. 63/9] gi|256369086|ref|YP_003106594.1| phage SPO1 DNA polymerase-related protein [Brucella microti CCM 4915] gi|260168402|ref|ZP_05755213.1| phage SPO1 DNA polymerase-related protein [Brucella sp. F5/99] gi|260545635|ref|ZP_05821376.1| uracil-DNA glycosylase superfamily protein [Brucella abortus NCTC 8038] gi|260563698|ref|ZP_05834184.1| uracil-DNA glycosylase superfamily protein [Brucella melitensis bv. 1 str. 16M] gi|260566770|ref|ZP_05837240.1| uracil-DNA glycosylase superfamily protein [Brucella suis bv. 4 str. 40] gi|260754411|ref|ZP_05866759.1| uracil-DNA glycosylase superfamily protein [Brucella abortus bv. 6 str. 870] gi|260757630|ref|ZP_05869978.1| uracil-DNA glycosylase superfamily protein [Brucella abortus bv. 4 str. 292] gi|260761457|ref|ZP_05873800.1| uracil-DNA glycosylase superfamily protein [Brucella abortus bv. 2 str. 86/8/59] gi|260883439|ref|ZP_05895053.1| uracil-DNA glycosylase superfamily protein [Brucella abortus bv. 9 str. C68] gi|261213657|ref|ZP_05927938.1| uracil-DNA glycosylase superfamily protein [Brucella abortus bv. 3 str. Tulya] gi|261218982|ref|ZP_05933263.1| uracil-DNA glycosylase superfamily protein [Brucella ceti M13/05/1] gi|261221850|ref|ZP_05936131.1| uracil-DNA glycosylase superfamily protein [Brucella ceti B1/94] gi|261315136|ref|ZP_05954333.1| uracil-DNA glycosylase superfamily protein [Brucella pinnipedialis M163/99/10] gi|261317308|ref|ZP_05956505.1| uracil-DNA glycosylase superfamily protein [Brucella pinnipedialis B2/94] gi|261321519|ref|ZP_05960716.1| uracil-DNA glycosylase superfamily protein [Brucella ceti M644/93/1] gi|261751976|ref|ZP_05995685.1| uracil-DNA glycosylase superfamily protein [Brucella suis bv. 5 str. 513] gi|261757863|ref|ZP_06001572.1| uracil-DNA glycosylase superfamily [Brucella sp. F5/99] gi|265988347|ref|ZP_06100904.1| uracil-DNA glycosylase superfamily protein [Brucella pinnipedialis M292/94/1] gi|265990760|ref|ZP_06103317.1| uracil-DNA glycosylase superfamily protein [Brucella melitensis bv. 1 str. Rev.1] gi|265994596|ref|ZP_06107153.1| uracil-DNA glycosylase superfamily protein [Brucella melitensis bv. 3 str. Ether] gi|265997814|ref|ZP_06110371.1| uracil-DNA glycosylase superfamily protein [Brucella ceti M490/95/1] gi|294852013|ref|ZP_06792686.1| uracil-DNA glycosylase superfamily protein [Brucella sp. NVSL 07-0026] gi|297248020|ref|ZP_06931738.1| uracil-DNA glycosylase superfamily protein [Brucella abortus bv. 5 str. B3196] gi|17983288|gb|AAL52480.1| hypothetical cytosolic protein [Brucella melitensis bv. 1 str. 16M] gi|23347445|gb|AAN29577.1| phage SPO1 DNA polymerase-related protein [Brucella suis 1330] gi|62195740|gb|AAX74040.1| SPO1 DNA polymerase-related protein [Brucella abortus bv. 1 str. 9-941] gi|82615637|emb|CAJ10624.1| Uracil-DNA glycosylase superfamily [Brucella melitensis biovar Abortus 2308] gi|161335430|gb|ABX61735.1| Uracil-DNA glycosylase superfamily [Brucella canis ATCC 23365] gi|163673643|gb|ABY37754.1| Uracil-DNA glycosylase superfamily [Brucella suis ATCC 23445] gi|189019434|gb|ACD72156.1| Uracil-DNA glycosylase superfamily [Brucella abortus S19] gi|225640534|gb|ACO00448.1| Uracil-DNA glycosylase superfamily protein [Brucella melitensis ATCC 23457] gi|237789940|gb|EEP64150.1| cytoplasmic protein [Brucella abortus str. 2308 A] gi|255999246|gb|ACU47645.1| phage SPO1 DNA polymerase-related protein [Brucella microti CCM 4915] gi|260097042|gb|EEW80917.1| uracil-DNA glycosylase superfamily protein [Brucella abortus NCTC 8038] gi|260153714|gb|EEW88806.1| uracil-DNA glycosylase superfamily protein [Brucella melitensis bv. 1 str. 16M] gi|260156288|gb|EEW91368.1| uracil-DNA glycosylase superfamily protein [Brucella suis bv. 4 str. 40] gi|260667948|gb|EEX54888.1| uracil-DNA glycosylase superfamily protein [Brucella abortus bv. 4 str. 292] gi|260671889|gb|EEX58710.1| uracil-DNA glycosylase superfamily protein [Brucella abortus bv. 2 str. 86/8/59] gi|260674519|gb|EEX61340.1| uracil-DNA glycosylase superfamily protein [Brucella abortus bv. 6 str. 870] gi|260872967|gb|EEX80036.1| uracil-DNA glycosylase superfamily protein [Brucella abortus bv. 9 str. C68] gi|260915264|gb|EEX82125.1| uracil-DNA glycosylase superfamily protein [Brucella abortus bv. 3 str. Tulya] gi|260920434|gb|EEX87087.1| uracil-DNA glycosylase superfamily protein [Brucella ceti B1/94] gi|260924071|gb|EEX90639.1| uracil-DNA glycosylase superfamily protein [Brucella ceti M13/05/1] gi|261294209|gb|EEX97705.1| uracil-DNA glycosylase superfamily protein [Brucella ceti M644/93/1] gi|261296531|gb|EEY00028.1| uracil-DNA glycosylase superfamily protein [Brucella pinnipedialis B2/94] gi|261304162|gb|EEY07659.1| uracil-DNA glycosylase superfamily protein [Brucella pinnipedialis M163/99/10] gi|261737847|gb|EEY25843.1| uracil-DNA glycosylase superfamily [Brucella sp. F5/99] gi|261741729|gb|EEY29655.1| uracil-DNA glycosylase superfamily protein [Brucella suis bv. 5 str. 513] gi|262552282|gb|EEZ08272.1| uracil-DNA glycosylase superfamily protein [Brucella ceti M490/95/1] gi|262765709|gb|EEZ11498.1| uracil-DNA glycosylase superfamily protein [Brucella melitensis bv. 3 str. Ether] gi|263001544|gb|EEZ14119.1| uracil-DNA glycosylase superfamily protein [Brucella melitensis bv. 1 str. Rev.1] gi|263094593|gb|EEZ18391.1| uracil-DNA glycosylase superfamily [Brucella melitensis bv. 2 str. 63/9] gi|264660544|gb|EEZ30805.1| uracil-DNA glycosylase superfamily protein [Brucella pinnipedialis M292/94/1] gi|294820602|gb|EFG37601.1| uracil-DNA glycosylase superfamily protein [Brucella sp. NVSL 07-0026] gi|297175189|gb|EFH34536.1| uracil-DNA glycosylase superfamily protein [Brucella abortus bv. 5 str. B3196] gi|326408670|gb|ADZ65735.1| Uracil-DNA glycosylase superfamily [Brucella melitensis M28] gi|326538395|gb|ADZ86610.1| uracil-DNA glycosylase superfamily protein [Brucella melitensis M5-90] Length = 223 Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 43/147 (29%), Gaps = 22/147 (14%) Query: 105 TEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEI-------------MRTQ 149 E L+I+G P N +G+PF+G G +L L Sbjct: 42 DEDVRLLIVGLAPGLRGANRTGRPFTGDYAGELLYSTLCEFGFATGKFEARPDDSLRLLD 101 Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FFNNDA 206 I PP N+ + + + + + ++ +G Sbjct: 102 ACIVNAVRCVPPENKPVGSEINNCRQFLTPMLTRFPNLDAVVTLGTIAHQSTVRALGVPV 161 Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVH 233 + GK +++ + ++ H Sbjct: 162 SRHPFGHGKATDI----GPLRIFSSYH 184 >gi|256546114|ref|ZP_05473467.1| uracil DNA glycosylase family protein [Anaerococcus vaginalis ATCC 51170] gi|256398231|gb|EEU11855.1| uracil DNA glycosylase family protein [Anaerococcus vaginalis ATCC 51170] Length = 190 Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 59/168 (35%), Gaps = 23/168 (13%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML--QSIEIMRTQIHISMISPWHPPG 162 + ++IIG P SG F+ K+G L L + I + ++P Sbjct: 31 NKDSKILIIGQAPGKKVEESGILFNDKSGENLVDWLGISMDTLHGKNFSILPMDFYYPGK 90 Query: 163 NRNLSNIEMEICRPIIMRQIE------LISPKILLFIGNKTKNFFFNNDAQKT-YQNLGK 215 ++ + R I ++ + + + + IG + F+ +D +K + + Sbjct: 91 GKSGD----KAPRKFIAKEYHPLLLEEIKNINLTILIGAYAQKFYLKDDFKKNLTETVRN 146 Query: 216 WSNLCTPHSIIPTLATVHPQEL-----IQYPLIKKNTWHALITLKKAL 258 + + + VHP L + K+ T L + + + Sbjct: 147 FKDYLPEY-----FPLVHPSPLNNRWMAKNKFFKEETLPELKKIIQRI 189 >gi|254555229|ref|YP_003061646.1| hypothetical protein JDM1_0060 [Lactobacillus plantarum JDM1] gi|254044156|gb|ACT60949.1| conserved hypothetical protein [Lactobacillus plantarum JDM1] Length = 163 Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 53/167 (31%), Gaps = 19/167 (11%) Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP--WHPPGN 163 +++I P + F+ +G+ L + Q + P ++ PG Sbjct: 3 PTATILVISQAPGRIAQNTKTYFNDASGDRLRDWMGVTREQFYQSDRIAVMPLDFYYPGK 62 Query: 164 RNLSNIEMEICRPIIMRQ---IELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNL 219 ++ + + + ++ L +G + QKT + + + Sbjct: 63 GKSGDLPPRKGFMDKWHEPLLAMMPNVQLTLLVGQYAIKAYLGRSRQKTLTATVQNYQDY 122 Query: 220 CTPHSIIPTLATVHPQELIQYPLIKKNTWH------ALI-TLKKALK 259 + VHP + Y KKN W L +K ALK Sbjct: 123 LPDY-----FPLVHPSP-LNYGWQKKNPWFQATVVPDLQRRVKAALK 163 >gi|256032916|pdb|3IKB|A Chain A, The Structure Of A Conserved Protein From Streptococcus Mutans Ua159. gi|256032917|pdb|3IKB|B Chain B, The Structure Of A Conserved Protein From Streptococcus Mutans Ua159 Length = 198 Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 22/211 (10%), Positives = 59/211 (27%), Gaps = 40/211 (18%) Query: 71 AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQ--------DLMIIGYTPSDSDN 122 + SL E+ + + S + + + + I+G P Sbjct: 1 SNAXTSLEEITKAIXA--------DSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQ 52 Query: 123 ISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQI 182 S ++ K+G+ L + + P + ++ + + Sbjct: 53 ESRLYWNDKSGDRLREWXGVDYDTFYHSGYFAVIPXDFYYPGKGKSGDLPPRKGFAQK-- 110 Query: 183 ELISP--------KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII--PTLATV 232 P ++ + IGN + ++ + + K ++ + V Sbjct: 111 -WHQPILDLLPDIQLTILIGNYAQKYYLHQKSSV------KLTDTVAHYKKYLPDYFPLV 163 Query: 233 HPQ-----ELIQYPLIKKNTWHALITLKKAL 258 HP ++P + L + + + Sbjct: 164 HPSPRNQIWXSRHPWFEAQVVPDLKKIIQQI 194 >gi|225627150|ref|ZP_03785188.1| cytoplasmic protein [Brucella ceti str. Cudo] gi|225617985|gb|EEH15029.1| cytoplasmic protein [Brucella ceti str. Cudo] Length = 223 Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 43/147 (29%), Gaps = 22/147 (14%) Query: 105 TEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEI-------------MRTQ 149 E L+I+G P N +G+PF+G G +L L Sbjct: 42 DEDIRLLIVGLAPGLRGANRTGRPFTGDYAGELLYSTLCEFGFATGKFEARPDDSLRLLD 101 Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FFNNDA 206 I PP N+ + + + + + ++ +G Sbjct: 102 ACIVNAVRCVPPENKPVGSEINNCRQFLTPMLTRFPNLDAVVTLGTIAHQSTVRALGVPV 161 Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVH 233 + GK +++ + ++ H Sbjct: 162 SRHPFGHGKATDI----GPLRIFSSYH 184 >gi|170017104|ref|YP_001728023.1| Uracil-DNA glycosylase [Leuconostoc citreum KM20] gi|169803961|gb|ACA82579.1| Uracil-DNA glycosylase [Leuconostoc citreum KM20] Length = 190 Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 56/167 (33%), Gaps = 15/167 (8%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 +++IIG PS +G + +G+ L L E + Q + P Sbjct: 28 PRTAEILIIGQAPSKRVQETGIMWHDASGDRLRDWLGVSETVFYQSGKIGVIPMDFYYPG 87 Query: 165 NLSNIEME-----ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 ++ + + E+ + K+++ IG + ++ N ++T K Sbjct: 88 KAASGDKAPRKGVAEKWHPKLLGEMPNVKLIILIGAYAQRYYLNLTNKETITATIKNYQH 147 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALI-TLKKALKN 260 P VHP L + P ++ L ++ LK Sbjct: 148 YLP----KYFPIVHPSPRNNIWLKKNPWFEQEVLPMLKQEVQAILKQ 190 >gi|167615066|ref|ZP_02383701.1| Uracil DNA glycosylase superfamily superfamily protein [Burkholderia thailandensis Bt4] Length = 175 Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 56/167 (33%), Gaps = 17/167 (10%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPP 161 ++I+G P + SG P+ +G L + L + + I + +P Sbjct: 4 DPRARILIVGQAPGARVHASGIPWDDASGKRLREWLNVDDATFYDESLFAIVPMGFCYPG 63 Query: 162 GNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQKT-YQNLGKWSN 218 + N C P+ + ++ P ++ L IG + F + + + + W Sbjct: 64 RGASGDNPPRPECAPLWLDKLLGELPDIRLTLLIGQYAQRRFLGARRKSSLTETVRAWPE 123 Query: 219 LCTPHSIIPTLATVHPQELIQYPLI-KKNTW---HALITLKKALKNL 261 + HP + K++ W L L+ + L Sbjct: 124 Y-----GPEFIPLAHPSP--RNQGWLKQHPWFEAEVLPALRGKVAEL 163 >gi|115525035|ref|YP_781946.1| uracil-DNA glycosylase superfamily protein [Rhodopseudomonas palustris BisA53] gi|115518982|gb|ABJ06966.1| Uracil-DNA glycosylase superfamily [Rhodopseudomonas palustris BisA53] Length = 225 Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 24/164 (14%), Positives = 45/164 (27%), Gaps = 33/164 (20%) Query: 88 HDCHLC-------STSLS--------TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131 +C LC + + + L+I+G P N +G+PF+G Sbjct: 22 RNCPLCPRLVAFRKEARQREPDWFNAPVPSFGGTDAALLIVGLAPGMQGANRTGRPFTGD 81 Query: 132 T-GNMLDKMLQSIEIMRTQ-------------IHISMISPWHPPGNRNLSNIEMEICRPI 177 G++L L + IS PP N+ L + Sbjct: 82 YAGDLLYPTLLEYGFAKGHYQARPDDGLKLIDCRISNAVRCVPPLNKPLPVEINTCRDFL 141 Query: 178 IMRQIELISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSN 218 + + + ++ +G A G + Sbjct: 142 GLGIAAMPRLRAIIALGRVAHETTVKTLGLRAVAAPFAHGAVHD 185 >gi|329767655|ref|ZP_08259175.1| hypothetical protein HMPREF0428_00872 [Gemella haemolysans M341] gi|328839082|gb|EGF88668.1| hypothetical protein HMPREF0428_00872 [Gemella haemolysans M341] Length = 194 Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 16/140 (11%), Positives = 44/140 (31%), Gaps = 13/140 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 ++I+G P S F+ K+G L + + + + + + + P Sbjct: 32 PSTAKILIVGQAPGIKAQESKIFFNDKSGVKLREWMGIDDEIFYKSGLIGVVPMDFYYPG 91 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + + + ++++ +G + ++ ND ++ + Sbjct: 92 KGKSGDLPPRKNFAIKWHSKVLELMPNLELIILVGKYAQEYYLGNDKKQ------NLTET 145 Query: 220 CTPHSII--PTLATVHPQEL 237 + VHP L Sbjct: 146 VFNYKQYLPRYFPIVHPSPL 165 >gi|256060777|ref|ZP_05450939.1| Uracil-DNA glycosylase superfamily protein [Brucella neotomae 5K33] gi|261324767|ref|ZP_05963964.1| uracil-DNA glycosylase superfamily protein [Brucella neotomae 5K33] gi|261300747|gb|EEY04244.1| uracil-DNA glycosylase superfamily protein [Brucella neotomae 5K33] Length = 223 Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 43/147 (29%), Gaps = 22/147 (14%) Query: 105 TEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEI-------------MRTQ 149 E L+I+G P N +G+PF+G G +L L Sbjct: 42 DEDVRLLIVGLAPGLRGANRTGRPFTGDYAGELLYSTLCEFGFATGKFEARPDDSLRLLD 101 Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FFNNDA 206 I PP N+ + + + + + ++ +G Sbjct: 102 ACIVNAVRCVPPENKPVGSEINNCRQFLTPMLTRFPNLDAVVTLGTIAHQSTVRALGVPV 161 Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVH 233 + GK +++ + ++ H Sbjct: 162 SRHPFGHGKATDI----GPLRIFSSYH 184 >gi|154509626|ref|ZP_02045268.1| hypothetical protein ACTODO_02159 [Actinomyces odontolyticus ATCC 17982] gi|153799260|gb|EDN81680.1| hypothetical protein ACTODO_02159 [Actinomyces odontolyticus ATCC 17982] Length = 199 Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 24/176 (13%), Positives = 59/176 (33%), Gaps = 24/176 (13%) Query: 99 TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMI 155 + +MI+G P +G ++ ++G+ L + + ++ I + Sbjct: 33 PLFYAG-PECRIMIVGQAPGRVAEETGIVWNDRSGDRLRDWMGVDRDTFYESGKLAIVPM 91 Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPK--ILLFIGNKTKNFFFNNDAQKTYQNL 213 + P ++ + ++ + PK + + +G + N + Sbjct: 92 DFYFPGTGKSGDLPPRKDFADTWHPRLLELMPKLEMTILVGAYATRRYLNLSSSA----- 146 Query: 214 GKWSNLCTPHSIIPTLATV----HPQELIQYPLI-KKNTW--HALI-TLKKALKNL 261 + + + L T HP + + KKN W ++ LK + +L Sbjct: 147 -SLTEVVRDYKRY--LPTYFPLVHPSP--RNQMWMKKNPWFAADVLPDLKARVASL 197 >gi|326407306|gb|ADZ64377.1| uracil DNA glycosylase superfamily protein [Lactococcus lactis subsp. lactis CV56] Length = 193 Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 49/167 (29%), Gaps = 17/167 (10%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + IIG P S ++ +G+ L L + + I P Sbjct: 32 HKEAKICIIGQAPGIRAQESRLFWNDPSGDRLRDWLGIDRTTFYESNKISILPLDFYFPG 91 Query: 165 NLSNIEMEICRPI---IMRQIELISPKI--LLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + ++ + + P+I + +G+ ++ N + + Sbjct: 92 KGKSGDLPPRAGFAQKWHKALLEEMPEIELFILVGSYAIKYYLNLKSSAKTTEVIHDFEA 151 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKNL 261 P VHP L + P + L LKK + L Sbjct: 152 YLP----KYFPLVHPSPRNNMWLAKNPWFEPEL---LPELKKRVAQL 191 >gi|319775908|ref|YP_004138396.1| uracil-DNA glycosylase [Haemophilus influenzae F3047] gi|329123764|ref|ZP_08252323.1| uracil DNA glycosylase [Haemophilus aegyptius ATCC 11116] gi|317450499|emb|CBY86716.1| Predicted uracil-DNA glycosylase [Haemophilus influenzae F3047] gi|327469667|gb|EGF15135.1| uracil DNA glycosylase [Haemophilus aegyptius ATCC 11116] Length = 195 Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 21/164 (12%), Positives = 47/164 (28%), Gaps = 15/164 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + I+G P S ++ K+G L + L + + P Sbjct: 33 PKTARINIVGQAPGLKAEQSRLYWNDKSGERLREWLGVDYDYFYNSGMFSVLPMDFYYPG 92 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + R M L + ++ + IG + ++ + + + Sbjct: 93 KGKSGDLPPRQGFAERWHSMILGHLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQF 152 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258 + VHP + + P ++ L L K + Sbjct: 153 LPHF-----MPLVHPSPRNQLWVTKNPWFEEQVIPELQILVKQI 191 >gi|85715064|ref|ZP_01046048.1| uracil-DNA glycosylase superfamily [Nitrobacter sp. Nb-311A] gi|85697979|gb|EAQ35852.1| uracil-DNA glycosylase superfamily [Nitrobacter sp. Nb-311A] Length = 190 Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 21/153 (13%), Positives = 41/153 (26%), Gaps = 22/153 (14%) Query: 99 TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEI----------- 145 + + ++I+G P N +G+PF+G G++L L Sbjct: 12 PVPSFGDSDAAVLIVGLAPGLQGANRTGRPFTGDYAGDLLYATLLKYGFAAGRYQARPDD 71 Query: 146 --MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF--- 200 IS PP N+ L + + + ++ +G + Sbjct: 72 GLKLVDCRISNAVRCVPPQNKPLPAEINTCRAFLSATLEAMPRLRAIVALGRIAHDSAVK 131 Query: 201 FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 A G + + H Sbjct: 132 ALGVRAAAAPFAHGAVHTA----GGVKLYDSYH 160 >gi|323339439|ref|ZP_08079721.1| uracil DNA glycosylase [Lactobacillus ruminis ATCC 25644] gi|323093150|gb|EFZ35740.1| uracil DNA glycosylase [Lactobacillus ruminis ATCC 25644] Length = 193 Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 17/161 (10%), Positives = 47/161 (29%), Gaps = 18/161 (11%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + ++IIG P +G ++ ++G+ L L + + + P Sbjct: 32 PKNARILIIGQAPGKKAQDTGIVWNDRSGDRLRDWLGIDRNVFYESGKIAVLPMDFYFPG 91 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + + ++ L +G+ + + + + K +++ Sbjct: 92 TGKSGDLPPRKGFAAKWHPRLLSAMPDIQLTLLVGSYAVKHYLHLKSSQ------KLTDV 145 Query: 220 CTPHSII--PTLATVHPQ-----ELIQYPLIKKNTWHALIT 253 + VHP + + P + L Sbjct: 146 VKDYKSFLPKYFPLVHPSPRNQIWMKKNPWFEAEVLPDLRE 186 >gi|42523757|ref|NP_969137.1| hypothetical protein Bd2306 [Bdellovibrio bacteriovorus HD100] gi|39575964|emb|CAE80130.1| hypothetical protein predicted by Glimmer/Critica [Bdellovibrio bacteriovorus HD100] Length = 165 Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 17/45 (37%), Gaps = 12/45 (26%) Query: 214 GKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258 GKW T P L++ P KK W+ L + K L Sbjct: 131 GKWLE------------TYSPAYLLEDPAAKKVVWNDLQKVMKEL 163 >gi|317051912|ref|YP_004113028.1| hypothetical protein Selin_1743 [Desulfurispirillum indicum S5] gi|316946996|gb|ADU66472.1| hypothetical protein Selin_1743 [Desulfurispirillum indicum S5] Length = 196 Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 55/183 (30%), Gaps = 19/183 (10%) Query: 76 SLHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 +L L +R C L + + ++I G P + SG PF +G Sbjct: 5 NLDALLVDIRRCTLCEPYLPLGARPVV--QVHRDASILIAGQAPGRRVHASGIPFDDASG 62 Query: 134 NMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--K 188 + L + + + + +I I + +P + C + + P + Sbjct: 63 DRLRQWMGVAREVFYDERRIAIVPMGFCYPGTGPHGDLPPRPQCAATWRAALLSLLPHIQ 122 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLI 243 + L IG + + + W +A HP L Q P Sbjct: 123 LTLVIGKYAQEYHMLPRPDSVTAAVANWQERWPH-----LIALPHPSPRNHRWLRQNPWF 177 Query: 244 KKN 246 + Sbjct: 178 EAQ 180 >gi|152995458|ref|YP_001340293.1| uracil-DNA glycosylase superfamily protein [Marinomonas sp. MWYL1] gi|150836382|gb|ABR70358.1| uracil-DNA glycosylase superfamily [Marinomonas sp. MWYL1] Length = 208 Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 59/203 (29%), Gaps = 30/203 (14%) Query: 80 LKSLLRSFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDK 138 LK + S C + I L+I G P + G+PF +G+ L + Sbjct: 9 LKDAVLSCQHCADVLPYPPKPIL-QIHPNAKLLIAGQAPGQKTHDIGRPFDDLSGDRLRE 67 Query: 139 ML---QSIEIMRTQIHISMISPWHPPGNRNLS-----------NIEMEICRPIIMRQIEL 184 L Q+ I + P + + S E + Sbjct: 68 WLGLSADEFYDEQQVAIVPMGFCFPGNSIHKSGPSTGKKSGDLPPRPECSIKWREAVLNQ 127 Query: 185 -ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELI 238 + ++ + +G + + T Q +W L HP L Sbjct: 128 LTNIELTIVLGAYAQAYHLGQSGNVTEQVK-QWRYWLEQGK----LVLPHPSPRNNRWLK 182 Query: 239 QYPLIKKNTWHALITLKKALKNL 261 Q P + + L L+ +K L Sbjct: 183 QNPWFESDV---LPELRLRIKGL 202 >gi|297539473|ref|YP_003675242.1| hypothetical protein M301_2300 [Methylotenera sp. 301] gi|297258820|gb|ADI30665.1| conserved hypothetical protein [Methylotenera sp. 301] Length = 210 Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 5/80 (6%) Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241 I+ + K+L+ +G A+ GK L + +AT L+Q P Sbjct: 131 IKDMQAKLLIAMGEAVVQMILQ-SAEPITHLSGKLHQL----HGVTLIATYDLPHLLQNP 185 Query: 242 LIKKNTWHALITLKKALKNL 261 K W L + L++L Sbjct: 186 ADKAKVWRDLCMGLQILQDL 205 >gi|241889400|ref|ZP_04776701.1| uracil-DNA glycosylase [Gemella haemolysans ATCC 10379] gi|241863943|gb|EER68324.1| uracil-DNA glycosylase [Gemella haemolysans ATCC 10379] Length = 194 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 20/169 (11%), Positives = 52/169 (30%), Gaps = 26/169 (15%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + ++IIG P S F+ K+G L + + + + + + + P Sbjct: 32 PKTAKILIIGQAPGIKAQESKIFFNDKSGVKLREWMGIDDEIFYKSGLIGVVPMDFYYPG 91 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + + + + ++++ +G ++++ N+ ++ + Sbjct: 92 KGKSGDLPPRKNFAPKWHVKVLELMPNLELIVLVGKYAQDYYLGNEKKQNLTE----TVY 147 Query: 220 CTPHSIIPTLATVHPQELIQY---------------PLIKKNTWHALIT 253 + VHP L P +KK L Sbjct: 148 NYKQYLPRYFPIVHPSPL--NFHWHNKNPWFIQEVVPELKKRVKEILQK 194 >gi|300768899|ref|ZP_07078791.1| uracil-DNA glycosylase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300493494|gb|EFK28670.1| uracil-DNA glycosylase [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 210 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 22/149 (14%), Positives = 47/149 (31%), Gaps = 12/149 (8%) Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP--WHPPGN 163 +++I P + F+ +G+ L + Q + P ++ PG Sbjct: 50 PTATILVISQAPGRIAQNTKTYFNDASGDRLRDWMGVTREQFYQSDRIAVMPLDFYYPGK 109 Query: 164 RNLSNIEMEICRPIIMRQ---IELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNL 219 ++ + + + ++ L +G + QKT + + + Sbjct: 110 GKSGDLPPRKGFMDKWHEPLLAMMPNVQLTLLVGQYAIKAYLGRSRQKTLTATVQNYQDY 169 Query: 220 CTPHSIIPTLATVHPQELIQYPLIKKNTW 248 + VHP + Y KKN W Sbjct: 170 LPDY-----FPLVHPSP-LNYGWQKKNPW 192 >gi|28377013|ref|NP_783905.1| hypothetical protein lp_0048 [Lactobacillus plantarum WCFS1] gi|308179232|ref|YP_003923360.1| hypothetical protein LPST_C0041 [Lactobacillus plantarum subsp. plantarum ST-III] gi|28269844|emb|CAD62741.1| unknown [Lactobacillus plantarum WCFS1] gi|308044723|gb|ADN97266.1| hypothetical protein LPST_C0041 [Lactobacillus plantarum subsp. plantarum ST-III] Length = 210 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 22/149 (14%), Positives = 47/149 (31%), Gaps = 12/149 (8%) Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP--WHPPGN 163 +++I P + F+ +G+ L + Q + P ++ PG Sbjct: 50 PTATILVISQAPGRIAQNTKTYFNDASGDRLRDWMGVTREQFYQSDRIAVMPLDFYYPGK 109 Query: 164 RNLSNIEMEICRPIIMRQ---IELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNL 219 ++ + + + ++ L +G + QKT + + + Sbjct: 110 GKSGDLPPRKGFMDKWHEPLLAMMPNVQLTLLVGQYAIKAYLGRSRQKTLTATVQNYQDY 169 Query: 220 CTPHSIIPTLATVHPQELIQYPLIKKNTW 248 + VHP + Y KKN W Sbjct: 170 LPDY-----FPLVHPSP-LNYGWQKKNPW 192 >gi|77412311|ref|ZP_00788625.1| Unknown [Streptococcus agalactiae CJB111] gi|77161630|gb|EAO72627.1| Unknown [Streptococcus agalactiae CJB111] Length = 194 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 58/161 (36%), Gaps = 16/161 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPP 161 + + I+G P + + K+G L + L + + + + ++P Sbjct: 32 PKTARINIVGQAPGLKTQEARLYWKDKSGVRLRQWLGVDEETFYHSGKFAVLPLDFYYPG 91 Query: 162 GNR--NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSN 218 + +L + + + E+ + ++ L +G + ++ + A K + + + + Sbjct: 92 KGKSGDLPPRKGFAEKWHPLILKEMPNVQLTLLVGQYAQKYYLGSSAHKNLTETVKAYKD 151 Query: 219 LCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITL 254 + L VHP L + P +K+ L + Sbjct: 152 YLPDY-----LPLVHPSPRNQIWLKKNPWFEKDLIVDLQKI 187 >gi|90418085|ref|ZP_01225997.1| putative uracil-DNA glycosylase [Aurantimonas manganoxydans SI85-9A1] gi|90337757|gb|EAS51408.1| putative uracil-DNA glycosylase [Aurantimonas manganoxydans SI85-9A1] Length = 209 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 65/201 (32%), Gaps = 23/201 (11%) Query: 80 LKSLLRSFHDC-------HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132 L +R+ C L T + + A + L+I G P + + S PF+ + Sbjct: 12 LYDTIRACRICRDAPVGPPLPVT-PNPVLAL-SGTARLLIAGQAPGNLADRSTTPFNDPS 69 Query: 133 GNMLDKMLQ---SIEIMRTQIHISMISPWHP---PGNRNLSNIEMEICRPIIMRQIELIS 186 G L L + ++ I + P P + + Sbjct: 70 GVRLRDWLGLSPEVFYDSARVAILPMGFCFPGTDPMGGDRPPRIECRAAWHDRAMAAMPQ 129 Query: 187 PKILLFIGNKTKNFFFNN-DAQKTYQNLGKWSNLCTPHSII-PTLATVHPQELIQYPLI- 243 +++L IG + F + + + + W + P L HP + Sbjct: 130 IELILAIGQHAQRFHIASGAGRSLTETVTNWRTILAEGGRFAPVLPLPHPSW--RNSGWL 187 Query: 244 KKNTW--HALI-TLKKALKNL 261 K++ W L+ L++ + L Sbjct: 188 KRHPWFGEELLPELRRRVGEL 208 >gi|225352217|ref|ZP_03743240.1| hypothetical protein BIFPSEUDO_03833 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225157464|gb|EEG70803.1| hypothetical protein BIFPSEUDO_03833 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 209 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 19/164 (11%), Positives = 47/164 (28%), Gaps = 16/164 (9%) Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL 166 G +++IG P + P++ K+G L L + P + Sbjct: 47 GARIVVIGQAPGAVAEETRIPWNDKSGERLRDWLGVSRETFYDPERVALLPMDFYFPGHG 106 Query: 167 -----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221 + + + + ++ + +G + + + + + + Sbjct: 107 RSGDLPPRKGFAEQWHPALLALMPNVRLTVLVGAYAVRRYLHLKNSDSLTTVVRDYDAYI 166 Query: 222 PHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKN 260 P + HP + + P + T L LK + Sbjct: 167 GRGFFPLV---HPSPRNQLWMSRNPWFEAET---LPALKARVNA 204 >gi|13470766|ref|NP_102335.1| hypothetical protein mll0558 [Mesorhizobium loti MAFF303099] gi|14021509|dbj|BAB48121.1| mll0558 [Mesorhizobium loti MAFF303099] Length = 224 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 67/212 (31%), Gaps = 22/212 (10%) Query: 66 QADSIAQKACSLHELKSLLRSFHDC-------HLCSTSLSTICATQTEGQDLMIIGYTPS 118 Q + + L L + +R+ C L + + ++I P Sbjct: 13 QPAECGRLSVELDSLAATVRACRICVENPVGKPL-PHEPRPVL-RPSSSARILIASQAPG 70 Query: 119 DSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSN-IEMEIC 174 ++SG PF+ +G+ L L + I + P + + C Sbjct: 71 TKVHLSGMPFTDASGDRLRSWLGVTSDEFYDIEKFAIVPMGFCFPGQDAKGGDLPPRREC 130 Query: 175 RPIIMRQIELISPKI--LLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231 P + + P+I +L IG +++ + + W + L Sbjct: 131 APAWRAPLMALMPRIDLVLTIGIYAQSWHMAAARRPSLTETVMDWRAIWENSVGAKVLPL 190 Query: 232 VHPQELIQYPLI-KKNTWH--ALI-TLKKALK 259 HP + K+N W L+ L+ ++ Sbjct: 191 PHPSW--RNSGWLKQNPWFEMDLLPFLRSEIR 220 >gi|116512695|ref|YP_811602.1| hypothetical protein LACR_2008 [Lactococcus lactis subsp. cremoris SK11] gi|116108349|gb|ABJ73489.1| Uracil-DNA glycosylase [Lactococcus lactis subsp. cremoris SK11] Length = 193 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 23/167 (13%), Positives = 49/167 (29%), Gaps = 17/167 (10%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + IIG P S ++ +G L L Q + I P Sbjct: 32 HKEAKICIIGQAPGIRAQESRLFWNDPSGERLRDWLGIDRETFYQSNKISILPLDFYFPG 91 Query: 165 NLSNIEMEICRPI---IMRQIELISP--KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + ++ + Q+ P + + +G+ ++ N + + + Sbjct: 92 KGKSGDLPPRKGFAEKWHEQLLQQMPEIEFFVLVGSYAIKYYLNLKSSAKTTEVIRDFEK 151 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKNL 261 P +HP L + P + + L+K + L Sbjct: 152 YLP----KYFPLIHPSPRNNIWLAKNPWFEPQL---VPELQKRIAQL 191 >gi|332638021|ref|ZP_08416884.1| Uracil-DNA glycosylase [Weissella cibaria KACC 11862] Length = 190 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 18/145 (12%), Positives = 44/145 (30%), Gaps = 14/145 (9%) Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL 166 ++IIG P +G F+ K+G+ L + + + + + P Sbjct: 30 DVRILIIGQAPGLKVEQTGVSFNDKSGDRLREWMGIDRDVFYDSGLIGVLPMDFYYPGKA 89 Query: 167 -----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221 + + ++L +G ++ ++ + + +T ++ K Sbjct: 90 KTGDLPPRKFVAQEWHQRIMATMPKIDLILLLGGYSQKYYLDVKSSETLTSIVK----RF 145 Query: 222 PHSIIPTLATVHPQ-----ELIQYP 241 HP L + P Sbjct: 146 ADFGPKYFPLAHPSPLNNIWLAKNP 170 >gi|270293176|ref|ZP_06199387.1| uracil DNA glycosylase family protein [Streptococcus sp. M143] gi|270279155|gb|EFA25001.1| uracil DNA glycosylase family protein [Streptococcus sp. M143] Length = 194 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 21/164 (12%), Positives = 46/164 (28%), Gaps = 14/164 (8%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + I+G P +G + K+G+ L + L E + + P Sbjct: 32 PKTARINIVGQAPGLKTQEAGIYWKDKSGDRLREWLGVDEDTFYNSGLFAVIPMDFYFPG 91 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + + + ++ L IG + ++ + K Sbjct: 92 HGKSGDLPPRKGFAEKWHPQLLKGCPNIELTLLIGQYAQTYYLHEKVSGKVTERVKHYKN 151 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258 P VHP + + P + L L + + Sbjct: 152 YLPE----FFPLVHPSPRNQIWMAKNPWFEAEVVPDLKALVQKI 191 >gi|304321224|ref|YP_003854867.1| putative uracil-DNA glycosylase [Parvularcula bermudensis HTCC2503] gi|303300126|gb|ADM09725.1| possible uracil-DNA glycosylase [Parvularcula bermudensis HTCC2503] Length = 206 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 26/177 (14%), Positives = 48/177 (27%), Gaps = 23/177 (12%) Query: 104 QTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEIMRTQI----------- 150 L+I+G P N +G+PF+G G++L + L S Sbjct: 28 GASSVSLLIVGLAPGVQGANRTGRPFTGDYAGDLLYQTLGSFGWATGPYDKRPDDGLELT 87 Query: 151 --HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF---FNND 205 I+ PP N+ + + R L ++L +G + Sbjct: 88 GAMITNAVRCVPPQNKPTAAEINRCRPFLRSRISSLPRLDVILSLGKIAHDSVVRTLGLK 147 Query: 206 AQKTYQNLGKWSNLCTPHSIIP--TLATVHPQELIQYPLIKKNTWHALITLKKALKN 260 + T P A+ H + T + + + Sbjct: 148 LKDHPFGH-NVHYAVTAEGGRPLALAASYHCS--RYNTNTGRLTEEMFADVFRQIAK 201 >gi|307292699|ref|ZP_07572545.1| Uracil-DNA glycosylase superfamily [Sphingobium chlorophenolicum L-1] gi|306880765|gb|EFN11981.1| Uracil-DNA glycosylase superfamily [Sphingobium chlorophenolicum L-1] Length = 217 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 49/189 (25%), Gaps = 32/189 (16%) Query: 76 SLHELKSLLRSFHDCHLCST---------------SLSTICATQTEGQDLMIIGYTPSDS 120 +L HDC LC + + + IIG P Sbjct: 2 TLQSPIPQSEPPHDCPLCPRLVAFRGENRAEHPDWWNAPVPVFGDPLARIAIIGLAPGKM 61 Query: 121 D-NISGKPFSGKT-GNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRN 165 N +G+PF+G G++L L + I PP N Sbjct: 62 GANRTGRPFTGDYAGDLLFATLGKFGLTEGKYDARADDGLKLRNAIILNAVKCLPPQN-K 120 Query: 166 LSNIEMEICRPIIM-RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS 224 E+ CR + L ++ + +G K + S Sbjct: 121 PLPEEVHNCRAFLKPAVAALPHAQVFVALGQIAHQSAVKALGGKLPKARFAHLAEHRMPS 180 Query: 225 IIPTLATVH 233 + + H Sbjct: 181 GKMLIDSYH 189 >gi|55821138|ref|YP_139580.1| hypothetical protein stu1126 [Streptococcus thermophilus LMG 18311] gi|55737123|gb|AAV60765.1| conserved hypothetical protein [Streptococcus thermophilus LMG 18311] Length = 188 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 18/165 (10%), Positives = 49/165 (29%), Gaps = 16/165 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + I+G P SG ++ +G+ L + + + I P Sbjct: 26 PKTARINIVGQAPGIRAQESGLYWNDPSGDNLRDWMGVSREEFYESGLFAIVPMDFYFPG 85 Query: 165 NLS-----NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSN 218 + + + + ++ + +GN ++++ + + + + + Sbjct: 86 HGKSGDLGPRKGFADKWHERVLDLAPNIQLTILVGNYAQHYYLHQKSSTKLTDTVKHYRD 145 Query: 219 LCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258 + VHP + P K L L + + Sbjct: 146 YLPDY-----FPLVHPSPRNNIWQAKNPWFMKEVLPDLKELVQKI 185 >gi|254501006|ref|ZP_05113157.1| Uracil DNA glycosylase superfamily [Labrenzia alexandrii DFL-11] gi|222437077|gb|EEE43756.1| Uracil DNA glycosylase superfamily [Labrenzia alexandrii DFL-11] Length = 197 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 37/120 (30%), Gaps = 15/120 (12%) Query: 99 TICATQTEGQDLMIIGYTPSDSDNI-SGKPFSGKT-GNMLDKMLQSIEIMRTQI------ 150 + + + L++IG P +G+PF+G G++L K + Sbjct: 19 PVPSFTSPNPRLLVIGLAPGMRGANATGRPFTGDYAGDLLYKTMLDFGFAEGAYKARPDD 78 Query: 151 -------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 I+ PP N+ ++ S + +L +G F Sbjct: 79 GLVLADALITNAVRCLPPQNKPTGPEIKTCRPYLLSTLAANPSVRAVLALGRIAHETFLT 138 >gi|306833319|ref|ZP_07466447.1| uracil-DNA glycosylase [Streptococcus bovis ATCC 700338] gi|304424516|gb|EFM27654.1| uracil-DNA glycosylase [Streptococcus bovis ATCC 700338] Length = 194 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 22/167 (13%), Positives = 46/167 (27%), Gaps = 15/167 (8%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + I+G P SG ++ +G+ L K L + + + P Sbjct: 32 PKTARINIVGQAPGIRAQESGLYWNDPSGDNLRKWLGVDREIFYDSGLFAVVPMDYYFPG 91 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + + ++ + +G + ++ + T K Sbjct: 92 TGKSGDLPPRKGFAEKWHKRTLAFAPNIELHILVGFYAQRYYLQQKSSVTLTETVKHYQT 151 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKALKN 260 P VHP + P K L +K+ L Sbjct: 152 YLP----QFFPLVHPSPRNNLWQARNPWFAKEVIPDLQKRVKEILAK 194 >gi|260580897|ref|ZP_05848721.1| uracil-DNA glycosylase [Haemophilus influenzae RdAW] gi|260092386|gb|EEW76325.1| uracil-DNA glycosylase [Haemophilus influenzae RdAW] Length = 214 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 48/164 (29%), Gaps = 15/164 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + I+G P S ++ K+G+ L + L I + P Sbjct: 52 PKTARINIVGQAPGLKAEQSRLYWNDKSGDRLREWLGVDYDYFYNSGIFAVLPMDFYYPG 111 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + R M L + ++ + IG + ++ + + + Sbjct: 112 KGKSGDLPPRQGFAERWHPMILGNLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQF 171 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258 + VHP + + P ++ L L K + Sbjct: 172 LPHF-----MPLVHPSPRNQLWVTKNPWFEEQVIPELQILVKQI 210 >gi|259047093|ref|ZP_05737494.1| uracil DNA glycosylase family protein [Granulicatella adiacens ATCC 49175] gi|259036143|gb|EEW37398.1| uracil DNA glycosylase family protein [Granulicatella adiacens ATCC 49175] Length = 213 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 21/178 (11%), Positives = 54/178 (30%), Gaps = 18/178 (10%) Query: 94 STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHIS 153 + + + ++I+G P S ++ K+G+ L + Q + Sbjct: 39 KAGIQPLFSA-PRRAKILIVGQAPGIKAQESRLFWNDKSGDNLRTWMGVTRDFFYQSDLF 97 Query: 154 MISPWHPPGNRNL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQK 208 + P + + + ++++ +G ++++ + +K Sbjct: 98 AVVPMDYYYPGKGKSGDLPPRKGFAEKWHEKTLALMPDIELIILVGKYAQDYYLKDTKKK 157 Query: 209 TYQNLGKWSNLCTPHSIIPTLATVHPQELIQ-----YPLIKKNTWHALITLKKALKNL 261 K P VHP L + P +K L +K ++ + Sbjct: 158 NLTETVKAYKEYLP----KMFPLVHPSPLNRRWMAKNPWFEKEV---LPEFQKRVQEI 208 >gi|292655197|ref|YP_003535094.1| uracil DNA glycosylase [Haloferax volcanii DS2] gi|291372791|gb|ADE05018.1| uracil DNA glycosylase [Haloferax volcanii DS2] Length = 208 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 42/155 (27%), Gaps = 10/155 (6%) Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDS-DNISGKPFSGKTGNMLDKMLQSI---EIM 146 + + + D +IG P +G PF+G G L L+ Sbjct: 13 DMRPSCDRYVPGYGDANADFHVIGDHPGVHGGIETGVPFAGGAGEKLFPALEDGELLGEA 72 Query: 147 RTQIHISMISPWHPPGNRN---LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 + ++ + S + ++ I+ +LL +G + N Sbjct: 73 GDEPTVNSTFFSYLHMCVPDGTPSAADYTDMERFFDAELRAIAAHVLLPVGAVATKYVLN 132 Query: 204 NDAQKTYQN---LGKWSNLCTPHSIIPTLATVHPQ 235 N ++ + S L P Sbjct: 133 NYTSVGWKTDIDMEALHGEELRGSGFLVLPIKDPA 167 >gi|254469821|ref|ZP_05083226.1| uracil-DNA glycosylase superfamily protein [Pseudovibrio sp. JE062] gi|211961656|gb|EEA96851.1| uracil-DNA glycosylase superfamily protein [Pseudovibrio sp. JE062] Length = 191 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 23/192 (11%), Positives = 53/192 (27%), Gaps = 24/192 (12%) Query: 91 HLCSTSLS-TICATQTEGQDLMIIGYTPS-DSDNISGKPFSGKT-GNMLDKMLQSIEIMR 147 L + + L+++G P N +G PF G G ML+ L + Sbjct: 3 ELHPDWHNAPVLDYGPVDASLIVVGLAPGHKGGNRTGIPFFGDFSGEMLNGALTASGFAS 62 Query: 148 TQI-------------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194 + I+ + PP N + + + ++ +G Sbjct: 63 YKDVAAPELGIEPLDVRITNVVKCMPPKNAPKPAEIRTCRPFFLDSMLVSDQTRTVVAVG 122 Query: 195 NKTKNFFFN-NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH---- 249 + + G + ++ H + ++ T Sbjct: 123 RTAHEELLKAFELKLKDNPFGHNRETQLTP-SLRMFSSFHCSQ--YNVNTRRITAEQFTA 179 Query: 250 ALITLKKALKNL 261 + +++ L +L Sbjct: 180 VFMRVREYLSSL 191 >gi|258541189|ref|YP_003186622.1| uracil-DNA glycosylase [Acetobacter pasteurianus IFO 3283-01] gi|256632267|dbj|BAH98242.1| uracil-DNA glycosylase [Acetobacter pasteurianus IFO 3283-01] gi|256635324|dbj|BAI01293.1| uracil-DNA glycosylase [Acetobacter pasteurianus IFO 3283-03] gi|256638379|dbj|BAI04341.1| uracil-DNA glycosylase [Acetobacter pasteurianus IFO 3283-07] gi|256641433|dbj|BAI07388.1| uracil-DNA glycosylase [Acetobacter pasteurianus IFO 3283-22] gi|256644488|dbj|BAI10436.1| uracil-DNA glycosylase [Acetobacter pasteurianus IFO 3283-26] gi|256647543|dbj|BAI13484.1| uracil-DNA glycosylase [Acetobacter pasteurianus IFO 3283-32] gi|256650596|dbj|BAI16530.1| uracil-DNA glycosylase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256653587|dbj|BAI19514.1| uracil-DNA glycosylase [Acetobacter pasteurianus IFO 3283-12] gi|742236|prf||2009317C adhB downstream ORF Length = 213 Score = 49.0 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 26/194 (13%), Positives = 55/194 (28%), Gaps = 23/194 (11%) Query: 64 VQQADSIAQKACSLHELKSLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTPSDSDN 122 + + L+ L +R C + + L+I G P + Sbjct: 12 TPSSAKSSDVETQLNCLVQEIRKCTACAHKLPLGPRPVLHV-SPHARLLIAGQAPGTRVH 70 Query: 123 ISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH----PPGNRNLSNIEMEICR 175 +G F+ +G+ L L + + ++ I ++ + P G E Sbjct: 71 ETGVSFNDASGDRLRGWLGMSRDVFYDSNRVAILPMALCYPGVLPKGGDRPPPPECASLW 130 Query: 176 PIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII--PTLATVH 233 L + ++ L +G+ +N+ GK H Sbjct: 131 R-ERILALLPNLRLTLLVGSYAQNYVLGK---------GKVYERTEHFQDFLPQYFPLPH 180 Query: 234 PQELIQYPLIKKNT 247 P + ++ T Sbjct: 181 PSW--RTGAWERKT 192 >gi|125624782|ref|YP_001033265.1| hypothetical protein llmg_2007 [Lactococcus lactis subsp. cremoris MG1363] gi|124493590|emb|CAL98575.1| Hypothetical protein llmg_2007 [Lactococcus lactis subsp. cremoris MG1363] gi|300071582|gb|ADJ60982.1| hypothetical protein LLNZ_10345 [Lactococcus lactis subsp. cremoris NZ9000] Length = 193 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 24/167 (14%), Positives = 50/167 (29%), Gaps = 17/167 (10%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + IIG P S ++ +G L L Q + I P Sbjct: 32 HKEAKICIIGQAPGIRAQESRLFWNDPSGERLRDWLGIDRETFYQSNKISILPLDFYFPG 91 Query: 165 NLSNIEMEICRPI---IMRQIELISPKI--LLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + ++ + Q+ P+I + +G+ ++ N + + + Sbjct: 92 KGKSGDLPPRKGFAEKWHEQLLQQMPEIELFVLVGSYAIKYYLNLKSSAKTTEVIRDFEK 151 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKNL 261 P +HP L + P + + L+K + L Sbjct: 152 YLP----KYFPLIHPSPRNNIWLAKNPWFEPQL---VPELQKRIAQL 191 >gi|254429907|ref|ZP_05043614.1| Uracil DNA glycosylase superfamily [Alcanivorax sp. DG881] gi|196196076|gb|EDX91035.1| Uracil DNA glycosylase superfamily [Alcanivorax sp. DG881] Length = 198 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 50/167 (29%), Gaps = 16/167 (9%) Query: 79 ELKSLLRSFHDCHLCST----SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 +L LL C LC + EG L+I+G P + +G P++ +G Sbjct: 3 QLIDLLEEVRACRLCEPHLPLGPRPVVQAG-EGARLLIVGQAPGTRVHETGIPWNDPSGE 61 Query: 135 MLDKMLQSIEIMRTQIHISMISPW------HPPGNRNLSNIEMEICRPIIMRQIELISPK 188 L LQ I P G E + EL + + Sbjct: 62 RLRDWLQIGPETFYDADQVAIVPMGLCYPGRGKGGDLPPRPEC-APQWHGPLLAELPNRR 120 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 + L +G + ++ + N+ ++ HP Sbjct: 121 LTLLVGQYAQRYYLPQPGKTLTDNVRHFARALEAG----FFPLPHPS 163 >gi|306842087|ref|ZP_07474759.1| uracil-DNA glycosylase superfamily protein [Brucella sp. BO2] gi|306287837|gb|EFM59260.1| uracil-DNA glycosylase superfamily protein [Brucella sp. BO2] Length = 223 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 44/147 (29%), Gaps = 22/147 (14%) Query: 105 TEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEI-------------MRTQ 149 E L+I+G P N +G+PF+G G +L L Sbjct: 42 DEDVRLLIVGLAPGLRGANRTGRPFTGDYAGELLYSTLCEFGFATGKFEARPDDSLRLLD 101 Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FFNNDA 206 I PP N+ + + + + + ++ +G + Sbjct: 102 ACIVNAVRCVPPENKPIGSEINNCRQFLTPMLTRFPNLDAVVTLGTIAHQSTVRALDVPV 161 Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVH 233 + GK +++ + ++ H Sbjct: 162 SRHPFGHGKATDI----GPLRIFSSYH 184 >gi|145633772|ref|ZP_01789496.1| predicted uracil-DNA glycosylase [Haemophilus influenzae 3655] gi|145635655|ref|ZP_01791352.1| predicted uracil-DNA glycosylase [Haemophilus influenzae PittAA] gi|229845211|ref|ZP_04465345.1| hypothetical protein CGSHi6P18H1_03141 [Haemophilus influenzae 6P18H1] gi|144985343|gb|EDJ92173.1| predicted uracil-DNA glycosylase [Haemophilus influenzae 3655] gi|145267128|gb|EDK07135.1| predicted uracil-DNA glycosylase [Haemophilus influenzae PittAA] gi|229811922|gb|EEP47617.1| hypothetical protein CGSHi6P18H1_03141 [Haemophilus influenzae 6P18H1] Length = 195 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 21/164 (12%), Positives = 47/164 (28%), Gaps = 15/164 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + I+G P S ++ K+G L + L + + P Sbjct: 33 PKTARINIVGQAPGLKAEQSRLYWNDKSGERLREWLGVDYDYFYNSGMFSVLPMDFYYPG 92 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + R M L + ++ + IG + ++ + + + Sbjct: 93 KGKSGDLPPRQGFAERWHPMILGHLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQF 152 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258 + VHP + + P ++ L L K + Sbjct: 153 LPHF-----MPLVHPSPRNQLWITKNPWFEEQVIPELQILVKQI 191 >gi|6831713|sp|O86222|Y220B_HAEIN RecName: Full=Uncharacterized protein HI_0220.2 gi|3212185|gb|AAC21888.1| predicted coding region HI0220.2 [Haemophilus influenzae Rd KW20] Length = 214 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 48/164 (29%), Gaps = 15/164 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + I+G P S ++ K+G+ L + L I + P Sbjct: 52 PKTARINIVGQAPGLKAEQSRLYWNDKSGDRLREWLGVDYDYFYNSGIFAVLPMDFYYPG 111 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + R M L + ++ + IG + ++ + + + Sbjct: 112 YGKSGDLPPRQGFAERWHPMILGNLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQF 171 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258 + VHP + + P ++ L L K + Sbjct: 172 LPHF-----MPLVHPSPRNQLWVTKNPWFEEQVIPELQILVKQI 210 >gi|145628533|ref|ZP_01784333.1| GTP cyclohydrolase II [Haemophilus influenzae 22.1-21] gi|145639719|ref|ZP_01795321.1| predicted uracil-DNA glycosylase [Haemophilus influenzae PittII] gi|144979003|gb|EDJ88689.1| GTP cyclohydrolase II [Haemophilus influenzae 22.1-21] gi|145271087|gb|EDK11002.1| predicted uracil-DNA glycosylase [Haemophilus influenzae PittII] gi|309750362|gb|ADO80346.1| Conserved hypothetical protein [Haemophilus influenzae R2866] Length = 195 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 48/164 (29%), Gaps = 15/164 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + I+G P S ++ K+G+ L + L I + P Sbjct: 33 PKTARINIVGQAPGLKAEQSRLYWNDKSGDRLREWLGVDYDYFYNSGIFAVLPMDFYYPG 92 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + R M L + ++ + IG + ++ + + + Sbjct: 93 KGKSGDLPPRQGFAERWHPMILGNLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQF 152 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258 + VHP + + P ++ L L K + Sbjct: 153 LPHF-----MPLVHPSPRNQLWVTKNPWFEEQVIPELQILVKQI 191 >gi|296112143|ref|YP_003622525.1| predicted uracil-DNA glycosylase [Leuconostoc kimchii IMSNU 11154] gi|295833675|gb|ADG41556.1| predicted uracil-DNA glycosylase [Leuconostoc kimchii IMSNU 11154] Length = 190 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 53/151 (35%), Gaps = 14/151 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPP 161 +++IIG PS SG + +G L K L +I + + ++P Sbjct: 28 PPTAEILIIGQAPSLQVQNSGIMWHDASGERLRKWLGIDDDTFYRSGKIGVLPMDFYYPG 87 Query: 162 GNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQK-TYQNLGKWSN 218 ++ + +Q+ P K+ + IG + ++ D + + ++ Sbjct: 88 KAKSGDKPPRKGVAETWHKQLIAEMPNIKLTILIGAYAQRYYLPIDKKDTITHVISEYRI 147 Query: 219 LCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248 + VHP + + KKN W Sbjct: 148 FLPKY-----FPIVHPSP--RNNIWLKKNPW 171 >gi|55823048|ref|YP_141489.1| hypothetical protein str1126 [Streptococcus thermophilus CNRZ1066] gi|55739033|gb|AAV62674.1| conserved hypothetical protein [Streptococcus thermophilus CNRZ1066] Length = 188 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 18/165 (10%), Positives = 49/165 (29%), Gaps = 16/165 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + I+G P SG ++ +G+ L + + + I P Sbjct: 26 PKTARINIVGQAPGIQAQESGLYWNDPSGDNLRDWMGVSREEFYESGLFAIVPMDFYFPG 85 Query: 165 NLS-----NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSN 218 + + + + ++ + +GN ++++ + + + + + Sbjct: 86 HGKSGDLGPRKGFADKWHERVLDLAPNIQLTILVGNYAQHYYLHQKSSTKLTDTVKHYRD 145 Query: 219 LCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258 + VHP + P K L L + + Sbjct: 146 YLPDY-----FPLVHPSPRNNIWQAKNPWFMKEVLPDLKELVQKI 185 >gi|86605131|ref|YP_473894.1| uracil-DNA glycosylase family protein [Synechococcus sp. JA-3-3Ab] gi|86553673|gb|ABC98631.1| putative uracil-DNA glycosylase, family 4 [Synechococcus sp. JA-3-3Ab] Length = 172 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 43/142 (30%), Gaps = 34/142 (23%) Query: 75 CSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLMIIGYT 116 L++ + + C + L +IG Sbjct: 13 QPWAALQAEIVACRRCPRLVAWREAVAQQKVARFCDQLYWGRPVPGFGDVQARLWVIGLA 72 Query: 117 PSDS-DNISGKPFSGKT-GNMLDKML-------------QSIEIMRTQIHISMISPWHPP 161 P+ N +G+ F+G G+ L + L + + +IS + PP Sbjct: 73 PAAHGGNRTGRVFTGDPSGDWLFRALRRARFANQPISLHREDGLQLRDCYISAVMRCAPP 132 Query: 162 GNRNLSNIEMEICRPIIMRQIE 183 N + E + C + +++E Sbjct: 133 QN-RPTAAEAKTCLGYLRQELE 153 >gi|30995363|ref|NP_438390.2| hypothetical protein HI0220.2 [Haemophilus influenzae Rd KW20] Length = 195 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 48/164 (29%), Gaps = 15/164 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + I+G P S ++ K+G+ L + L I + P Sbjct: 33 PKTARINIVGQAPGLKAEQSRLYWNDKSGDRLREWLGVDYDYFYNSGIFAVLPMDFYYPG 92 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + R M L + ++ + IG + ++ + + + Sbjct: 93 YGKSGDLPPRQGFAERWHPMILGNLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQF 152 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258 + VHP + + P ++ L L K + Sbjct: 153 LPHF-----MPLVHPSPRNQLWVTKNPWFEEQVIPELQILVKQI 191 >gi|315604996|ref|ZP_07880050.1| uracil DNA glycosylase [Actinomyces sp. oral taxon 180 str. F0310] gi|315313275|gb|EFU61338.1| uracil DNA glycosylase [Actinomyces sp. oral taxon 180 str. F0310] Length = 199 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 21/173 (12%), Positives = 53/173 (30%), Gaps = 18/173 (10%) Query: 99 TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158 + +M++G P +G ++ ++G+ L + I P Sbjct: 33 PLFYAG-PECRIMVVGQAPGRVAEETGIVWNDRSGDRLRDWMGIDRDTFYSSGKLAIVPM 91 Query: 159 HPPGNRNLSNIEMEICRPIIMR-----QIELISPKILLFIGNKTKNFFFN-NDAQKTYQN 212 + ++ R + + + + +G + + + + Sbjct: 92 DFYFPGTGKSGDLPPRRDFADKWHPRLLSLMPRLDMTILVGAYATRRYLHLPSSASLTET 151 Query: 213 LGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW---HALITLKKALKNL 261 + ++ + + VHP + + KKN W L LK+ + L Sbjct: 152 VRRYRDYLPTY-----FPLVHPSP--RNQMWMKKNPWFAATVLPDLKERVAAL 197 >gi|162147827|ref|YP_001602288.1| hypothetical protein GDI_2043 [Gluconacetobacter diazotrophicus PAl 5] gi|209542448|ref|YP_002274677.1| hypothetical protein Gdia_0265 [Gluconacetobacter diazotrophicus PAl 5] gi|161786404|emb|CAP55986.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus PAl 5] gi|209530125|gb|ACI50062.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus PAl 5] Length = 223 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 20/188 (10%), Positives = 43/188 (22%), Gaps = 35/188 (18%) Query: 75 CSLHELKSLLRSFHDCH----------LCSTSLSTICATQTEGQDLMIIGYTPSDSDNIS 124 L L +R+ C L +S L+I P + + Sbjct: 6 DDLDALLCQVRACRACADSLPLGPRPILHVSST----------ARLLIASQAPGTRVHET 55 Query: 125 GKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW------HPPGNRNLSNIEMEICRPII 178 G F+ +G+ L L+ + P P + Sbjct: 56 GISFNDASGDRLRGWLEMDRATFYDSSRVALLPMGLCYPGRLPAGGDRPPRPECAPLWRA 115 Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238 + ++ L +G+ + + + HP Sbjct: 116 RLLALMPCIRLTLLVGSYAQAAVLGP-------GRVEDRVRNFRALLPHYFPLPHPSW-- 166 Query: 239 QYPLIKKN 246 + ++ Sbjct: 167 RTGAWERR 174 >gi|260583656|ref|ZP_05851404.1| uracil DNA glycosylase [Granulicatella elegans ATCC 700633] gi|260158282|gb|EEW93350.1| uracil DNA glycosylase [Granulicatella elegans ATCC 700633] Length = 196 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 55/161 (34%), Gaps = 16/161 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 E ++IIG P S K F K+G+ L + L + + + + + P Sbjct: 31 PETAKILIIGQAPGLKAQESRKFFWDKSGDRLREWLGIDKTLFYESGLFAVVPMDFYYPG 90 Query: 165 N-----LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSN 218 + + + L + +L +G+ +N++ ++ + + +S Sbjct: 91 KGKSGDKPPRKGFAPKWHPLVLPLLKQVECILLVGSYAQNYYLKETKKENLTETVRSYSE 150 Query: 219 LCTPHSIIPTLATVHPQEL-IQ----YPLIKKNTWHALITL 254 + VHP L I+ P ++ L + Sbjct: 151 YLPKY-----FPLVHPSPLNIRWMKKNPWFEEEVLPELKLI 186 >gi|90420855|ref|ZP_01228760.1| uracil-DNA glycosylase [Aurantimonas manganoxydans SI85-9A1] gi|90334830|gb|EAS48602.1| uracil-DNA glycosylase [Aurantimonas manganoxydans SI85-9A1] Length = 223 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 24/187 (12%), Positives = 44/187 (23%), Gaps = 41/187 (21%) Query: 84 LRSFHDCHLCS--------------TSLST-----ICATQTEGQDLMIIGYTPSDSD-NI 123 DC LC + + + L+I G P N Sbjct: 12 AEPSRDCPLCPRLVAFREEWRAKEPDWHNAPVPTLLPPSGAGAVRLLIAGLAPGLRGANR 71 Query: 124 SGKPFSGKT-GNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSNI 169 +G+PF+G G++L L + I PP N+ + Sbjct: 72 TGRPFTGDYAGDLLYATLARYGFANDRFAARTDDGLELIDTAIVNAVRCVPPQNKPVGAE 131 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSNLCTPHSII 226 + R ++ +G + + I Sbjct: 132 INTCRQFFSGRMATFPKLAAVVTLGRIAHDSTVRALGERPSAAPFGHNAHHMV----GGI 187 Query: 227 PTLATVH 233 ++ H Sbjct: 188 AVFSSYH 194 >gi|255619764|ref|XP_002540046.1| conserved hypothetical protein [Ricinus communis] gi|223499709|gb|EEF22337.1| conserved hypothetical protein [Ricinus communis] Length = 166 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 23/148 (15%), Positives = 43/148 (29%), Gaps = 31/148 (20%) Query: 86 SFHDCHLCST------SLST------ICATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT 132 C + S + + L+I+G P + N +G+PF+G Sbjct: 7 DCRLCPRLANFLDEVKSENPDYFCRPVPPFGAGQPKLLIVGLAPGLNGANRTGRPFTGDY 66 Query: 133 -GNMLDKMLQSIEI-----------------MRTQIHISMISPWHPPGNRNLSNIEMEIC 174 G +L LQ+ I+ PP N+ ++ + Sbjct: 67 AGVLLYSTLQTFGFSTSSEPLDASGWANPELSLIDCRITNAVKCLPPANKPETSEVVTCN 126 Query: 175 RPIIMRQIELISPKILLFIGNKTKNFFF 202 + L ++L +GN Sbjct: 127 GYLASELAGLSQGAVVLALGNVAHAAVL 154 >gi|304321158|ref|YP_003854801.1| hypothetical protein PB2503_08019 [Parvularcula bermudensis HTCC2503] gi|303300060|gb|ADM09659.1| hypothetical protein PB2503_08019 [Parvularcula bermudensis HTCC2503] Length = 184 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 24/175 (13%), Positives = 53/175 (30%), Gaps = 21/175 (12%) Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHP-- 160 + + P + + GKPF +G+ L + + + I I ++ P Sbjct: 1 MTARIGVFSQAPGNLAHQGGKPFLDPSGDRLRRWMGLTEDQFYGSGLIAIVPMAFCFPGY 60 Query: 161 -------PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQN 212 G + + +I+L IG + + A + Sbjct: 61 DGTGPTGRGGDRPPPRICAEKWRNEIMAMIDDRLEIVLLIGRYAQEWHLGKSAARRLSDA 120 Query: 213 LGKW--SNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW---HALITLKKALKNL 261 +G+W L HP + K++ W + L++ + ++ Sbjct: 121 VGQWPSHFADADRGGELILPMPHPSW--RNTAWLKRHPWFEAEVIPRLQRRIADV 173 >gi|312885565|ref|ZP_07745202.1| Uracil-DNA glycosylase superfamily [Mucilaginibacter paludis DSM 18603] gi|311301952|gb|EFQ78984.1| Uracil-DNA glycosylase superfamily [Mucilaginibacter paludis DSM 18603] Length = 190 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 64/183 (34%), Gaps = 26/183 (14%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 + +L + +RS C L + + A + ++I+G P SG P+ +GN Sbjct: 1 MDKLLAEIRSCTVCRSFLPNVPRPIVQA--SRTSKIVIVGQAPGQKVQNSGIPWDDLSGN 58 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIELISP 187 L + L + + + +P G+ + ++ Q I Sbjct: 59 ELRRWLGVSKEQFYDPELFALLPMGFCYPGKGTTGDLPPRPECAPLWHKLVFDQTTEI-- 116 Query: 188 KILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKN 246 ++++ IG N++ + + T + + + + L VHP P K Sbjct: 117 RLVILIGQYAHNYYLKDSRKATLTDTVKSFKDYLPHY-----LPLVHPS-----PRNK-- 164 Query: 247 TWH 249 W Sbjct: 165 IWQ 167 >gi|68248828|ref|YP_247940.1| uracil-DNA glycosylase [Haemophilus influenzae 86-028NP] gi|68057027|gb|AAX87280.1| predicted uracil-DNA glycosylase [Haemophilus influenzae 86-028NP] Length = 214 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 47/164 (28%), Gaps = 15/164 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + I+G P S ++ K+G+ L + L I + P Sbjct: 52 PKTARINIVGQAPGLKAEQSRLYWNDKSGDRLREWLGVDYDYFYNSGIFAVLPMDFYYPG 111 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + R M L + ++ + IG + ++ + + + Sbjct: 112 KGKSGDLPPRQGFAERWHPMILGNLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQF 171 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258 + VHP + P ++ L L K + Sbjct: 172 LPHF-----MPLVHPSPRNQLWATKNPWFEEQVIPELQILVKQI 210 >gi|301155916|emb|CBW15386.1| unnamed protein product [Haemophilus parainfluenzae T3T1] Length = 193 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 20/150 (13%), Positives = 46/150 (30%), Gaps = 13/150 (8%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + I+G P S ++ K+G+ L + L + + P Sbjct: 32 PTTARINIVGQAPGIKAQESRLYWNDKSGDRLREWLGVDRDTFYHSGLFAVIPMDFYYPG 91 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + + L + ++ + IG + ++ + + + + + Sbjct: 92 KGKSGDLPPRKGFAEKWHPLILANLPNIELTILIGQYAQKYYLPENNLNVTETVHHFRDF 151 Query: 220 CTPHSIIPTLATVHPQELIQYPLI-KKNTW 248 L VHP + + KKN W Sbjct: 152 LPHF-----LPLVHPSP--RNQIWLKKNPW 174 >gi|126724784|ref|ZP_01740627.1| Uracil-DNA glycosylase [Rhodobacterales bacterium HTCC2150] gi|126705948|gb|EBA05038.1| Uracil-DNA glycosylase [Rhodobacterales bacterium HTCC2150] Length = 191 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 56/194 (28%), Gaps = 17/194 (8%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 + +L S +++ CH I ++I G P + G PF +G+ L Sbjct: 1 MDDLVSEMQACMICHDLPLGPKPIF-KINSKAKILIAGQAPGRITHAKGVPFDDPSGDRL 59 Query: 137 DKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK--ILL 191 L + I I + P + C + P+ + L Sbjct: 60 RDWLGVDRDTFYNDPAIAILPMGLCFPGTGKGGDLPPRPECAIAWRGRALAKMPRLELTL 119 Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKN 246 IG ++ A+ + + HP L Q P + + Sbjct: 120 IIGRYAIDWHLPEMAKL------TVTKAVEMGKNDNQMILPHPSPRNNRWLKQNPWFEVD 173 Query: 247 TWHALITLKKALKN 260 L + L+N Sbjct: 174 VLPDLRARIERLRN 187 >gi|301168872|emb|CBW28465.1| predicted uracil-DNA glycosylase [Haemophilus influenzae 10810] Length = 195 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 48/164 (29%), Gaps = 15/164 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + I+G P S ++ K+G+ L + L I + P Sbjct: 33 PKTARINIVGQAPGLKAEQSRLYWNDKSGDRLREWLGVDYDYFYNSGIFAVLPMDFYYLG 92 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + R M L + ++ + IG + ++ + + + Sbjct: 93 KGKSGDLPPRQGFAERWHPMILGNLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQF 152 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258 + VHP + + P ++ L L K + Sbjct: 153 LPHF-----MPLVHPSPRNQLWVTKNPWFEEQVIPELQILVKQI 191 >gi|290580343|ref|YP_003484735.1| hypothetical protein SmuNN2025_0817 [Streptococcus mutans NN2025] gi|254997242|dbj|BAH87843.1| hypothetical protein [Streptococcus mutans NN2025] Length = 195 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 22/206 (10%), Positives = 60/206 (29%), Gaps = 40/206 (19%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQ--------DLMIIGYTPSDSDNISGKP 127 SL E+ + + S + + + + I+G P S Sbjct: 3 SLEEITKAIMA--------DSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLY 54 Query: 128 FSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP 187 ++ K+G+ L + + + P + ++ + + P Sbjct: 55 WNDKSGDRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQK---WHQP 111 Query: 188 --------KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII--PTLATVHPQ-- 235 ++ + IGN + ++ + + K ++ + VHP Sbjct: 112 ILDLLPDIQLTILIGNYAQKYYLHQKSSV------KLTDTVAHYKKYLPDYFPLVHPSPR 165 Query: 236 ---ELIQYPLIKKNTWHALITLKKAL 258 + ++P + L + + + Sbjct: 166 NQIWMSKHPWFEAQVVPDLKKIIQQI 191 >gi|262067118|ref|ZP_06026730.1| uracil DNA glycosylase family protein [Fusobacterium periodonticum ATCC 33693] gi|291379173|gb|EFE86691.1| uracil DNA glycosylase family protein [Fusobacterium periodonticum ATCC 33693] Length = 197 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 23/196 (11%), Positives = 55/196 (28%), Gaps = 21/196 (10%) Query: 78 HELKSLLRSFHDCH-LCSTSLS---TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 +LK L+ + + + + + ++I+G P + + K+G Sbjct: 5 EKLKKLIEDIKNDEENKKYTEQGIDPLFSA-PKEARIVIVGQAPGLKAQENKLYWKDKSG 63 Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL-----SNIEMEICRPIIMRQIELISPK 188 + L E ++ I P + + L + + Sbjct: 64 DKLRLWTGIDEKTFYSSNLLAIIPMDFYYPGKGKSGDLPPRKDFGEKWHNKILELLPNVE 123 Query: 189 ILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPL 242 + + IG + F+ + + + + VHP L + P Sbjct: 124 LFILIGKYAQEFYLKGRTKENLTETVHSYKEYLP-----KFFPIVHPSPLNIRWLKKNPW 178 Query: 243 IKKNTWHALITLKKAL 258 +K L + + Sbjct: 179 FEKEVVPELKEMVTKI 194 >gi|296284701|ref|ZP_06862699.1| hypothetical protein CbatJ_13823 [Citromicrobium bathyomarinum JL354] Length = 198 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 23/168 (13%), Positives = 53/168 (31%), Gaps = 9/168 (5%) Query: 76 SLHELKSLLRSFHDCHLCST-SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 S L + + + C + + + ++IIG P + SG P+ +G+ Sbjct: 2 STETLHADIAACRVCETALGFAPRPVV-QFSSTSRILIIGQAPGSKVHASGIPWDDASGD 60 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189 L + + Q+ + + +P C P+ ++ P ++ Sbjct: 61 RLREWTGLNRDQMYDAEQVALVPMGFCYPGKASGGDRPPRPECAPLWHERVLAALPDDRL 120 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP-TLATVHPQE 236 L +G+ + + + L T + + HP Sbjct: 121 TLLVGSYAQAANL-PETRGWTMARRVEHWLETDGAAFDGAIPLPHPAW 167 >gi|294782841|ref|ZP_06748167.1| uracil DNA glycosylase family protein [Fusobacterium sp. 1_1_41FAA] gi|294481482|gb|EFG29257.1| uracil DNA glycosylase family protein [Fusobacterium sp. 1_1_41FAA] Length = 197 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 20/165 (12%), Positives = 46/165 (27%), Gaps = 16/165 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + ++I+G P + + K+G+ L E ++ I P Sbjct: 35 PKEARIVIVGQAPGLKAQENKLYWKDKSGDKLRLWTGIDEKTFYSSNLLAIIPMDFYYPG 94 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSN 218 + + L + ++ + IG + F+ + + + + Sbjct: 95 KGKSGDLPPRKDFGEKWHNKILELLPNVELFILIGKYAQEFYLNGRTKENLTETVHSYKE 154 Query: 219 LCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258 VHP L + P +K L + + Sbjct: 155 YLP-----KFFPIVHPSPLNIGWLKKNPWFEKEVVPELKEMVTKI 194 >gi|225549238|ref|ZP_03770211.1| conserved hypothetical protein [Borrelia burgdorferi 94a] gi|225370096|gb|EEG99536.1| conserved hypothetical protein [Borrelia burgdorferi 94a] gi|312147965|gb|ADQ30624.1| conserved hypothetical protein [Borrelia burgdorferi JD1] Length = 199 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 18/135 (13%) Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR----------QIEL 184 +L+ LQ I I + +R++ + + +I Sbjct: 71 LLNNSLQEKGINDHIIIYVNK-NYLNEPSRDIITKWCKSINIYNYKIIDTIESLNLEISN 129 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK 244 +PK +L + +FF N + + IP + T P I+ P +K Sbjct: 130 KNPKAILSC--EEIDFFLNQPLRIHI-----VRGIELRFKGIPLVFTYLPTNQIKNPELK 182 Query: 245 KNTWHALITLKKALK 259 K W L +K +K Sbjct: 183 KEIWQDLKIIKGIIK 197 >gi|195941753|ref|ZP_03087135.1| hypothetical protein Bbur8_02589 [Borrelia burgdorferi 80a] gi|218249391|ref|YP_002374547.1| hypothetical protein BbuZS7_0013 [Borrelia burgdorferi ZS7] gi|223889084|ref|ZP_03623673.1| conserved hypothetical protein [Borrelia burgdorferi 64b] gi|224532560|ref|ZP_03673183.1| conserved hypothetical protein [Borrelia burgdorferi WI91-23] gi|224533904|ref|ZP_03674489.1| conserved hypothetical protein [Borrelia burgdorferi CA-11.2a] gi|226322072|ref|ZP_03797597.1| conserved hypothetical protein [Borrelia burgdorferi Bol26] gi|218164579|gb|ACK74640.1| conserved hypothetical protein [Borrelia burgdorferi ZS7] gi|223885333|gb|EEF56434.1| conserved hypothetical protein [Borrelia burgdorferi 64b] gi|224512503|gb|EEF82881.1| conserved hypothetical protein [Borrelia burgdorferi WI91-23] gi|224512907|gb|EEF83273.1| conserved hypothetical protein [Borrelia burgdorferi CA-11.2a] gi|226232662|gb|EEH31416.1| conserved hypothetical protein [Borrelia burgdorferi Bol26] Length = 199 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 18/135 (13%) Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR----------QIEL 184 +L+ LQ I I + +R++ + + +I Sbjct: 71 LLNNSLQEKGINDHIIIYVNK-NYLNEPSRDIITKWCKSINIYNYKIIDTIESLNLEISN 129 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK 244 +PK +L + +FF N + + IP + T P I+ P +K Sbjct: 130 KNPKAILSC--EEIDFFLNQPLRIHI-----VRGIELRFKGIPLVFTYLPTNQIKNPELK 182 Query: 245 KNTWHALITLKKALK 259 K W L +K +K Sbjct: 183 KEIWQDLKIIKGIIK 197 >gi|332638089|ref|ZP_08416952.1| Uracil-DNA glycosylase [Weissella cibaria KACC 11862] Length = 192 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 46/146 (31%), Gaps = 14/146 (9%) Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP--WHPPGN 163 ++IIG P +G F+ K+G+ L + + + + P ++ PG Sbjct: 31 PTVKILIIGQAPGAVVEQTGILFNDKSGDRLREWMGIDRTTFYDSGLIGVLPMDFYFPGK 90 Query: 164 RNLSNIEMEICRPIIMRQI---ELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220 ++ Q + +++L +G + + A ++ + Sbjct: 91 GKRGDLPPRKFVAGEWHQRLLDTMPDIELILLVGKYAQQHYLPIKASESLTS----VVHR 146 Query: 221 TPHSIIPTLATVHPQ-----ELIQYP 241 L HP L + P Sbjct: 147 FADFGPRYLPLAHPSPLNNIWLAKNP 172 >gi|294084109|ref|YP_003550867.1| uracil-DNA glycosylase superfamily protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292663682|gb|ADE38783.1| Uracil-DNA glycosylase superfamily [Candidatus Puniceispirillum marinum IMCC1322] Length = 227 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 24/184 (13%), Positives = 57/184 (30%), Gaps = 35/184 (19%) Query: 85 RSFHDCH-----LCSTSLS-------TICATQTEGQDLMIIGYTPS-DSDNISGKPFSGK 131 C L + + + + A + ++I+G P N +G+PF+G Sbjct: 13 ADCALCPRLHDYLQTYAKTHPEWHNAPVDAMGSLKAQVLIVGLAPGLKGANATGRPFTGD 72 Query: 132 T-GNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177 + G L +ML + I + I+ PP N+ + + Sbjct: 73 SAGGYLFEMLGRFGMAHGAYGGHANDGIRLDDVRITNAVRCVPPQNKPSAVETHNCRPFL 132 Query: 178 IMRQIELISPKILLFIGNKTKNFFF---NNDAQKTYQNLGKWSNL-----CTPHSIIPTL 229 + + + + K++L +G + + + + + Sbjct: 133 VGEIMAMANLKVVLALGRLAHDAVLRATGYRYAEYLFTHASHHQIVSKMADGNARKLQLI 192 Query: 230 ATVH 233 ++ H Sbjct: 193 SSYH 196 >gi|312149498|gb|ADQ29569.1| conserved hypothetical protein [Borrelia burgdorferi N40] Length = 199 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 18/135 (13%) Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR----------QIEL 184 +L+ LQ I I + +R++ + + +I Sbjct: 71 LLNNSLQEKGIKDHIIIYVNK-NYLNEPSRDIITKWCKSINIYNYKIIDTIESLNLEISN 129 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK 244 +PK +L + +FF N + + IP + T P I+ P +K Sbjct: 130 KNPKAILSC--EEIDFFLNQPLRIHI-----VRGIELRFKGIPLVFTYLPTNQIKNPELK 182 Query: 245 KNTWHALITLKKALK 259 K W L +K +K Sbjct: 183 KEIWQDLKIIKGIIK 197 >gi|261868208|ref|YP_003256130.1| uracil-DNA glycosylase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413540|gb|ACX82911.1| uracil-DNA glycosylase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 193 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 20/164 (12%), Positives = 49/164 (29%), Gaps = 15/164 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 G + ++G P + ++ K+G+ L + L + + P Sbjct: 32 PTGARINVVGQAPGVKAEQTRLYWNDKSGDRLREWLDVDRETFYHSGLFAVLPMDFYYPG 91 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + L + ++ + IG + ++ + + + + + Sbjct: 92 KGKSGDLPPRKGFAEKWHPSILTGLPNIELTIVIGQYAQQYYLPQNKRNVTETVKNYREF 151 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258 L VHP L + P ++ L L K + Sbjct: 152 LPHF-----LPLVHPSPRNQLWLAKNPWFMQDVVPTLQQLVKQI 190 >gi|216264304|ref|ZP_03436296.1| conserved hypothetical protein [Borrelia burgdorferi 156a] gi|226321157|ref|ZP_03796698.1| conserved hypothetical protein [Borrelia burgdorferi 29805] gi|215980777|gb|EEC21584.1| conserved hypothetical protein [Borrelia burgdorferi 156a] gi|226233449|gb|EEH32189.1| conserved hypothetical protein [Borrelia burgdorferi 29805] Length = 199 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 18/135 (13%) Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR----------QIEL 184 +L+ LQ I I + +R++ + + +I Sbjct: 71 LLNNSLQEKGIKDHIIIYVNK-NYLNEPSRDIITKWCKSINIYNYKIIDTIESLNLEISN 129 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK 244 +PK +L + +FF N + + IP + T P I+ P +K Sbjct: 130 KNPKAILSC--EEIDFFLNQPLRIHI-----VRGIELRFKGIPLVFTYLPTNQIKNPELK 182 Query: 245 KNTWHALITLKKALK 259 K W L +K +K Sbjct: 183 KEIWQDLKIIKGIIK 197 >gi|225551919|ref|ZP_03772859.1| conserved hypothetical protein [Borrelia sp. SV1] gi|225370917|gb|EEH00347.1| conserved hypothetical protein [Borrelia sp. SV1] Length = 199 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 18/135 (13%) Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR----------QIEL 184 +L+ LQ I I + +R++ + + +I Sbjct: 71 LLNNSLQEKGISDHIIIYVNK-NYLNEPSRDIITKWCKSINIYNYKIIDTIESLNLEISN 129 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK 244 +PK +L + +FF N + + IP + T P I+ P +K Sbjct: 130 KNPKAILSC--EEIDFFLNQPLRIHI-----VRGIELRFKGIPLVFTYLPTNQIKNPELK 182 Query: 245 KNTWHALITLKKALK 259 K W L +K +K Sbjct: 183 KEIWQDLKIIKGIIK 197 >gi|145631978|ref|ZP_01787730.1| predicted uracil-DNA glycosylase [Haemophilus influenzae R3021] gi|144982362|gb|EDJ89942.1| predicted uracil-DNA glycosylase [Haemophilus influenzae R3021] Length = 195 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 21/164 (12%), Positives = 48/164 (29%), Gaps = 15/164 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + I+G P S ++ K+G+ L + L + + P Sbjct: 33 PKTARINIVGQAPGLKAEQSRLYWNDKSGDRLREWLGVDYDYFYNSGMLAVLPMDFYYPG 92 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + R M L + ++ + IG + ++ + + + Sbjct: 93 KGKSGDLPPRQGFAERWHPMILGHLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQF 152 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258 + VHP + + P ++ L L K + Sbjct: 153 LPHF-----MPLVHPSPRNQLWVTKNPWFEEQVIPELQILVKQI 191 >gi|110633297|ref|YP_673505.1| uracil-DNA glycosylase superfamily protein [Mesorhizobium sp. BNC1] gi|110284281|gb|ABG62340.1| Uracil-DNA glycosylase superfamily [Chelativorans sp. BNC1] Length = 220 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 27/184 (14%), Positives = 49/184 (26%), Gaps = 42/184 (22%) Query: 88 HDCHLCSTSLSTICAT-------------------QTEGQDLMIIGYTPSDSD-NISGKP 127 DC LC S I + L+I+G P N +G+P Sbjct: 12 RDCPLCPRLHSFIAGWREKEPEWFNAPVHTFLPTGGEQAVRLLIVGLAPGLRGANRTGRP 71 Query: 128 FSGKT-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEI 173 F+G G +L L T + I+ PP N+ ++ Sbjct: 72 FTGDYAGMLLYGTLIRFGFASGRFEARPDDGLSLTDVAITNAVRCVPPENKPETSEIRTC 131 Query: 174 CRPIIM-RQIELISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229 + + K ++ +G + + G + Sbjct: 132 RDYFLTPTIKRFPNLKGIVTLGKIAHDSTVRALGHRVSAIPFIHG----AEEQAGDLRIF 187 Query: 230 ATVH 233 ++ H Sbjct: 188 SSYH 191 >gi|167957410|ref|ZP_02544484.1| Uracil-DNA glycosylase [candidate division TM7 single-cell isolate TM7c] Length = 193 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 21/161 (13%), Positives = 57/161 (35%), Gaps = 15/161 (9%) Query: 109 DLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSN 168 ++++G P + KP++ +G +L + L + + + P + Sbjct: 36 RIVLVGQAPGRIAQQTLKPWNDASGRLLRRWLNVTDKQFYNPDLFALMPIDFYYPGRGVH 95 Query: 169 IEMEICRPIIMR-----QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH 223 ++ + ++ + ++ + +G+ + ++ + A + N+ P Sbjct: 96 GDLPPRLDFARKWHPRLLAQMSNIRLTILVGSYAQKYYLDRHANQNLTATVADFNMYLPD 155 Query: 224 SIIPTLATVHPQEL-----IQYPLIKKNTWHALITL-KKAL 258 VHP L + P + + L T+ K+ L Sbjct: 156 Y----FPLVHPSPLNIGWRKRNPWFESDVIPVLQTIVKEVL 192 >gi|145641564|ref|ZP_01797142.1| predicted uracil-DNA glycosylase [Haemophilus influenzae R3021] gi|145273855|gb|EDK13723.1| predicted uracil-DNA glycosylase [Haemophilus influenzae 22.4-21] Length = 195 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 21/164 (12%), Positives = 47/164 (28%), Gaps = 15/164 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + I+G P S ++ K+G L + L + + P Sbjct: 33 PKTARINIVGQAPGLKAEQSRLYWNDKSGERLREWLGVDYDYFYNSGMFSVLPMDFYYPG 92 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + R M L + ++ + IG + ++ + + + Sbjct: 93 KGKSGDLPPRQGFAERWHPMILGHLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQF 152 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258 + VHP + + P ++ L L K + Sbjct: 153 LPHF-----IPLVHPSPRNQLWITKNPWFEEQVIPELQILVKQI 191 >gi|145637394|ref|ZP_01793054.1| predicted uracil-DNA glycosylase [Haemophilus influenzae PittHH] gi|148825519|ref|YP_001290272.1| hypothetical protein CGSHiEE_02100 [Haemophilus influenzae PittEE] gi|229847398|ref|ZP_04467499.1| hypothetical protein CGSHi7P49H1_00870 [Haemophilus influenzae 7P49H1] gi|145269486|gb|EDK09429.1| predicted uracil-DNA glycosylase [Haemophilus influenzae PittHH] gi|148715679|gb|ABQ97889.1| hypothetical protein CGSHiEE_02100 [Haemophilus influenzae PittEE] gi|229809724|gb|EEP45449.1| hypothetical protein CGSHi7P49H1_00870 [Haemophilus influenzae 7P49H1] Length = 195 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 21/164 (12%), Positives = 47/164 (28%), Gaps = 15/164 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + I+G P S ++ K+G L + L + + P Sbjct: 33 PKTARINIVGQAPGLKAEQSRLYWNDKSGERLREWLGVDYDYFYNSGMFSVLPMDFYYPG 92 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + R M L + ++ + IG + ++ + + + Sbjct: 93 KGKSGDLPPRQGFAERWHPMILGHLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQF 152 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258 + VHP + + P ++ L L K + Sbjct: 153 LPHF-----IPLVHPSPRNQLWITKNPWFEEQVIPELQILVKQI 191 >gi|325845846|ref|ZP_08169044.1| uracil-DNA glycosylase family protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481752|gb|EGC84784.1| uracil-DNA glycosylase family protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 190 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 55/171 (32%), Gaps = 21/171 (12%) Query: 79 ELKSLLRSFHDCHLCSTSLSTICATQ-----TEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 +++ ++ T + ++IIG P SG F+ K+G Sbjct: 2 QIEKIIEKLKADPRNKTYTKR--GIGPIFQFNKNAKILIIGQAPGKKVEESGILFNDKSG 59 Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE------LISP 187 L L I + I P + + + R I ++ L + Sbjct: 60 ENLVDWL-GISMNTLHGENFSIIPMDFYYPGKDKSGD-KAPRKFIAKEYHPLLLEELKNI 117 Query: 188 KILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQEL 237 + + IG + F+ +D +K + + + + + VHP L Sbjct: 118 NLTILIGAYAQKFYLKDDFKKNLTETVRNFKDYLPEY-----FPLVHPSPL 163 >gi|148827360|ref|YP_001292113.1| uracil-DNA glycosylase [Haemophilus influenzae PittGG] gi|148718602|gb|ABQ99729.1| predicted uracil-DNA glycosylase [Haemophilus influenzae PittGG] Length = 195 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 21/164 (12%), Positives = 47/164 (28%), Gaps = 15/164 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + I+G P S ++ K+G+ L + L + + P Sbjct: 33 PKTARINIVGQAPGLKAEQSRLYWNDKSGDRLREWLGVDYDYFYNSGMFSVLPMDFYYPG 92 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + R M L + ++ + IG + ++ + + + Sbjct: 93 KGKSGDLPPRQGFAERWHPMILGNLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQF 152 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258 + VHP + P ++ L L K + Sbjct: 153 LPHF-----MPLVHPSPRNQLWATKNPWFEEQVIPELQILVKQI 191 >gi|225549703|ref|ZP_03770668.1| conserved hypothetical protein [Borrelia burgdorferi 118a] gi|225369663|gb|EEG99111.1| conserved hypothetical protein [Borrelia burgdorferi 118a] Length = 199 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 18/135 (13%) Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR----------QIEL 184 +L+ LQ I I + +R++ + + +I Sbjct: 71 LLNNSLQEKGINDQIIIYVNK-NYLNEPSRDIITKWCKSINIYNYKIIDTIESLNLEISN 129 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK 244 +PK +L + +FF N + + IP + T P I+ P +K Sbjct: 130 KNPKAILSC--EEIDFFLNQPLRIHI-----VRGIELRFKGIPLVFTYLPTNQIKNPELK 182 Query: 245 KNTWHALITLKKALK 259 K W L +K +K Sbjct: 183 KEIWQDLKIIKGIIK 197 >gi|15594359|ref|NP_212147.1| hypothetical protein BB0013 [Borrelia burgdorferi B31] gi|3915321|sp|O51046|Y013_BORBU RecName: Full=Uncharacterized protein BB_0013 gi|2687890|gb|AAC66401.1| predicted coding region BB0013 [Borrelia burgdorferi B31] Length = 199 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 18/135 (13%) Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR----------QIEL 184 +L+ LQ I I + +R++ + + +I Sbjct: 71 LLNNSLQEKGINDQIIIYVNK-NYLNEPSRDIITKWCKSINIYNYKIIDTIESLNLEISN 129 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK 244 +PK +L + +FF N + + IP + T P I+ P +K Sbjct: 130 KNPKAILSC--EEIDFFLNQPLRIHI-----VRGIELRFKGIPLVFTYLPTNQIKNPELK 182 Query: 245 KNTWHALITLKKALK 259 K W L +K +K Sbjct: 183 KEIWQDLKIIKGIIK 197 >gi|293391723|ref|ZP_06636057.1| uracil-DNA glycosylase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952257|gb|EFE02376.1| uracil-DNA glycosylase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 193 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/164 (12%), Positives = 49/164 (29%), Gaps = 15/164 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 G + ++G P + ++ K+G+ L + L + + P Sbjct: 32 PTGARINVVGQAPGVKAEQTRLYWNDKSGDRLREWLDVDRETFYHSGLFAVLPMDFYYPG 91 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + L + ++ + IG + ++ + + + + + Sbjct: 92 KGKSGDLPPRKGFAEKWHPSILAGLPNIELTIVIGQYAQQYYLPQNKRNVTETVKNYREF 151 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258 L VHP L + P ++ L L K + Sbjct: 152 LPHF-----LPLVHPSPRNQLWLAKNPWFMQDVVPTLQQLVKQI 190 >gi|221217372|ref|ZP_03588843.1| conserved hypothetical protein [Borrelia burgdorferi 72a] gi|221192650|gb|EEE18866.1| conserved hypothetical protein [Borrelia burgdorferi 72a] Length = 199 Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 18/135 (13%) Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR----------QIEL 184 +L+ LQ I I + +R++ + + +I Sbjct: 71 LLNNSLQEKGIKDQIIIYVNK-NYLNEPSRDIITKWCKSINIYNYKIIDTIESLNLEISN 129 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK 244 +PK +L + +FF N + + IP + T P I+ P +K Sbjct: 130 KNPKAILSC--EEIDFFLNQPLRIHI-----VRGIELRFKGIPLVFTYLPTNQIKNPELK 182 Query: 245 KNTWHALITLKKALK 259 K W L +K +K Sbjct: 183 KEIWQDLKIIKGIIK 197 >gi|34497814|ref|NP_902029.1| uracil-DNA glycosylase [Chromobacterium violaceum ATCC 12472] gi|34103670|gb|AAQ60031.1| probable uracil-DNA glycosylase [Chromobacterium violaceum ATCC 12472] Length = 193 Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 25/174 (14%), Positives = 49/174 (28%), Gaps = 15/174 (8%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L +L + + C G +++ G P + SG P+ +G L Sbjct: 4 LADLLGEIAACRVCEAALPCGPRPALRAAAGARILLAGQAPGRKVHESGVPWDDASGKRL 63 Query: 137 DKML---QSIEIMRTQIHISMISPWHP-PGNRNLSNIEMEICRPIIMRQIE-LISPKILL 191 + L I + +P G E R R + L +++L Sbjct: 64 REWLAVDAETFYDPECFAIVPMGFCYPGTGPSGDLPPRPECRRLWHPRLLPLLERVELVL 123 Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQY 240 +G + + + + + W + HP L + Sbjct: 124 AVGYYAQAYHLAARKRSLTETVAAWREYFPA-----VMPLPHPSPRNQMWLARN 172 >gi|237740077|ref|ZP_04570558.1| uracil-DNA glycosylase [Fusobacterium sp. 2_1_31] gi|229422094|gb|EEO37141.1| uracil-DNA glycosylase [Fusobacterium sp. 2_1_31] Length = 197 Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 23/198 (11%), Positives = 54/198 (27%), Gaps = 21/198 (10%) Query: 78 HELKSLLRSFHDCH-LCSTSLS---TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 +LK L+ + + + + + ++I+G P + + K+G Sbjct: 5 EKLKKLIEDIKNDEENKKYTEQGIDPLFSA-PKEARIVIVGQAPGLKAQENKLYWKDKSG 63 Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL-----SNIEMEICRPIIMRQIELISPK 188 + L E ++ I P + + L + Sbjct: 64 DKLRLWTGIDEKTFYSSNLLAIIPMDFYYPGKGKSGDLPPRKDFGEKWHNKILELLPDVE 123 Query: 189 ILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPL 242 + + IG + F+ + + + + VHP L + P Sbjct: 124 LFILIGKYAQEFYLKGRTKENLTETVHSYKEYLP-----KFFPIVHPSPLNIRWLKKNPW 178 Query: 243 IKKNTWHALITLKKALKN 260 +K L + + Sbjct: 179 FEKEVVPELKEMVTKIME 196 >gi|90424131|ref|YP_532501.1| uracil-DNA glycosylase superfamily protein [Rhodopseudomonas palustris BisB18] gi|90106145|gb|ABD88182.1| Uracil-DNA glycosylase superfamily [Rhodopseudomonas palustris BisB18] Length = 226 Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 41/164 (25%), Gaps = 33/164 (20%) Query: 88 HDCHLC----------STS-----LSTICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131 +C LC + + L+I+G P N +G+PF+G Sbjct: 11 RNCPLCPRLVDYRLAVRARAPDWFNAPVPTFGDPDAALLIVGLAPGVQGANRTGRPFTGD 70 Query: 132 T-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177 G++L L I+ PP N+ + + Sbjct: 71 FAGDLLYATLIEHGFAKGVYQARPDDGLRLVDCRIANAVRCVPPQNKPRPVEINTCRQFL 130 Query: 178 IMRQIELISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSN 218 + ++ +G + A G Sbjct: 131 SAVLETMPRLTAIVALGRVAHDSTVKALGLRASAAPFGHGAVHT 174 >gi|315640240|ref|ZP_07895357.1| uracil-DNA glycosylase [Enterococcus italicus DSM 15952] gi|315483902|gb|EFU74381.1| uracil-DNA glycosylase [Enterococcus italicus DSM 15952] Length = 191 Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 18/166 (10%), Positives = 50/166 (30%), Gaps = 15/166 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPP 161 ++IIG P S + ++G L L + I + ++P Sbjct: 31 HPEAKVVIIGQAPGKKAQASQIVWHDQSGKRLRSWLGLSDETFYQSHDLAILPMDFYYPG 90 Query: 162 GNRNL--SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + + + + ++++ +G + ++ ++ + ++ Sbjct: 91 KGKTGDLPPRKAFAAKWHPLCLKLMPDVQLIILVGRYAQAYYLPHNKANLTTTVQQFQTF 150 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKN 260 + HP L + P ++ L + L N Sbjct: 151 LPQY-----FPLPHPSPLNGRWLKKNPWFEQTVVPQLKEIIATLVN 191 >gi|260582440|ref|ZP_05850232.1| uracil-DNA glycosylase [Haemophilus influenzae NT127] gi|260094591|gb|EEW78487.1| uracil-DNA glycosylase [Haemophilus influenzae NT127] Length = 214 Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 48/164 (29%), Gaps = 15/164 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + I+G P S ++ K+G L + L + + P Sbjct: 52 PKTARINIVGQAPGLKAEQSRLYWNDKSGERLREWLGVDYDYFYNSGMFSVLPMDFYYPG 111 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + R M L + ++ + IG + ++ + + + L Sbjct: 112 KGKSGDLPPRQGFAERWHPMILGHLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQL 171 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258 + VHP + + P ++ L L K + Sbjct: 172 LPHF-----IPLVHPSPRNQLWITKNPWFEEQVIPELQILVKQI 210 >gi|229828037|ref|ZP_04454106.1| hypothetical protein GCWU000342_00086 [Shuttleworthia satelles DSM 14600] gi|229792631|gb|EEP28745.1| hypothetical protein GCWU000342_00086 [Shuttleworthia satelles DSM 14600] Length = 195 Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 45/139 (32%), Gaps = 10/139 (7%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML--QSIEIMRTQIHISMISPWHP-- 160 + ++IIG P S PF+ K+G L + +I I + + P Sbjct: 32 HKEARILIIGQAPGKKVEESLIPFNDKSGEKLMDWMGIDRDTFYSERIAIMPMDFYFPGK 91 Query: 161 --PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218 G+ + + + ++ + IG +++ DA++ + Sbjct: 92 SASGSGDKPPRKFIAQEYHQEILAYMDQIQLTIIIGKYAMDYYLGKDAKRNLTETVRAYQ 151 Query: 219 LCTPHSIIPTLATVHPQEL 237 P VHP L Sbjct: 152 EYLP----KYFPIVHPSPL 166 >gi|325067732|ref|ZP_08126405.1| Uracil-DNA glycosylase superfamily protein [Actinomyces oris K20] Length = 120 Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 7/99 (7%), Positives = 21/99 (21%), Gaps = 19/99 (19%) Query: 42 KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL---- 97 + + +A + L EL + + C Sbjct: 15 PVPPGTGWPEDPATAATPVARSAADVARLADSSSDLPELDARITVCRACDRLVAWREEVA 74 Query: 98 ---------------STICATQTEGQDLMIIGYTPSDSD 121 + + + + ++G P+ + Sbjct: 75 RTGRRASFAHEPYWGRPVASVGSADARIYVVGLAPAANG 113 >gi|116326514|ref|YP_794194.1| Uracil-DNA glycosylase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116098013|gb|ABJ63163.1| Uracil-DNA glycosylase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 190 Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/166 (12%), Positives = 51/166 (30%), Gaps = 18/166 (10%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 +E L+IIG P SG + +G+ L + + + + P Sbjct: 28 SEKAKLVIIGQAPGLRVQNSGIMWDDASGDRLREWIGVGKDTFYNSGKIGVIPMDFYYPG 87 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + ++++ +G+ + ++ N Q K +++ Sbjct: 88 KGKWGDLPPRRGVANKWHPKLLELMPDVQLIILVGSYAQKYYLNLGYQS------KITDV 141 Query: 220 CTPHSII-PT-LATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258 + P VHP + + P ++ L + + Sbjct: 142 IKNYKNYLPLYFPIVHPSPRNNIWIKKNPWFEQEVVPELKEIISKI 187 >gi|296100322|ref|YP_003620491.1| hypothetical protein LKI_10716 [Leuconostoc kimchii IMSNU 11154] gi|295831639|gb|ADG39522.1| hypothetical protein LKI_10716 [Leuconostoc kimchii IMSNU 11154] Length = 190 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 20/164 (12%), Positives = 49/164 (29%), Gaps = 18/164 (10%) Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL 166 L+IIG P SG + +G+ L + + + + P Sbjct: 30 KAKLVIIGQAPGLRVQNSGIMWDDASGDRLREWIGVGKDTFYNSGKIGVIPMDFYYPGKG 89 Query: 167 -----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221 + + ++++ +G+ + ++ N Q K +++ Sbjct: 90 KWGDLPPRRGVANKWHPKLLELMPDVQLIILVGSYAQKYYLNLGYQS------KITDVIK 143 Query: 222 PHSII-PT-LATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258 + P VHP + + P ++ L + + Sbjct: 144 NYKNYLPLYFPIVHPSPRNNIWIKKNPWFEQEVVPELKEIISKI 187 >gi|319898186|ref|YP_004136383.1| uracil-DNA glycosylase [Haemophilus influenzae F3031] gi|317433692|emb|CBY82080.1| Predicted uracil-DNA glycosylase [Haemophilus influenzae F3031] Length = 191 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 18/136 (13%), Positives = 39/136 (28%), Gaps = 10/136 (7%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + I+G P S ++ K+G+ L + L I + P Sbjct: 33 PKTARINIVGQAPGLKAEQSRLYWNDKSGDRLREWLGVDYDYFYNSGIFAVLPMDFYYPG 92 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + R M L + ++ + IG + ++ + + + Sbjct: 93 KGKSGDLPPRQGFAERWHPMILGHLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQF 152 Query: 220 CTPHSIIPTLATVHPQ 235 + VHP Sbjct: 153 LPHF-----MPLVHPS 163 >gi|331002980|ref|ZP_08326492.1| hypothetical protein HMPREF0491_01354 [Lachnospiraceae oral taxon 107 str. F0167] gi|330413024|gb|EGG92399.1| hypothetical protein HMPREF0491_01354 [Lachnospiraceae oral taxon 107 str. F0167] Length = 196 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 54/151 (35%), Gaps = 14/151 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 E ++I+G P + K + ++G+ L + + + I I P Sbjct: 34 PESAKVIIVGQAPGIKAQEAKKYWFDRSGDRLREWMGVDKKTFYDSDIFAIIPMDFYYPG 93 Query: 165 NLSNIEMEICRPIIMR-----QIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSN 218 + ++ + + EL + ++++ IG + ++ N + + + + Sbjct: 94 KGKSGDLPPRKDFASKWHPLLLKELPNVELIVLIGQYAQKYYLGNREKSNLTETVKAYKE 153 Query: 219 LCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248 + L VHP + + KKN W Sbjct: 154 YLPRY-----LPLVHPSP--RNMMWMKKNPW 177 >gi|326693494|ref|ZP_08230499.1| Uracil-DNA glycosylase [Leuconostoc argentinum KCTC 3773] Length = 189 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 54/168 (32%), Gaps = 14/168 (8%) Query: 98 STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP 157 I + ++IIG PS SG + +G+ L + L E + + P Sbjct: 22 QPIFSA-PATAKIVIIGQAPSRKVQDSGIMWHDASGDRLREWLGVDETTFYDSGLFGVIP 80 Query: 158 WHPPGNRN-----LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN 212 + ++ ++++ IG + ++ + + T Sbjct: 81 MDFYFPGKGKSGDKPPRAGIAEKWHPRLLAQMPDVELMILIGAYAQRYYLDLSPKDTITA 140 Query: 213 LGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTWHALITLKKALK 259 K H + VHP + + KKN W L + AL+ Sbjct: 141 TVK----NYAHYLPRYFPIVHPSP--RNNIWLKKNPWF-LQDVVAALQ 181 >gi|162448158|ref|YP_001621290.1| uracil-DNA glycosylase superfamily protein [Acholeplasma laidlawii PG-8A] gi|161986265|gb|ABX81914.1| uracil-DNA glycosylase superfamily protein [Acholeplasma laidlawii PG-8A] Length = 193 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 22/165 (13%), Positives = 48/165 (29%), Gaps = 17/165 (10%) Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRN- 165 ++IIG P + ++G L L E + P Sbjct: 33 SSKILIIGQAPGIKTQEKNLLWMDQSGKKLRSWLGVDEKTFYDNKLFGQMPMDFYFPGKS 92 Query: 166 ----LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221 + + + K+++ IG +++++ D + K N Sbjct: 93 KSGDKPPRKDFASMWHPKLLSLMPNVKLIILIGQYSQSYYLGKDFNQNLTQTVKSYNQYL 152 Query: 222 PHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKNL 261 P HP L + P + + L L++ ++ + Sbjct: 153 P----KYFPLPHPSPLNLFWLKKNPWFETDV---LPVLQQMIQEI 190 >gi|297154347|gb|ADI04059.1| hypothetical protein SBI_00938 [Streptomyces bingchenggensis BCW-1] Length = 226 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 25/151 (16%), Positives = 48/151 (31%), Gaps = 36/151 (23%) Query: 84 LRSFHDCHL------------------CSTSLSTICATQTEGQDLMIIGYTPSDS-DNIS 124 + C + EG L IIG P+ N + Sbjct: 1 MSGCRACPRLVRWREEAARIKRPAYREWDYWARPVPGFGPEGAGLAIIGLAPAAHGGNRT 60 Query: 125 GKPFSGKT-GNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSNIE 170 G+ F+G G+ L L ++ + I+ PP + E Sbjct: 61 GRMFTGDRAGDFLYAALYAVGLANQPEATHRGDGLELRGVRITAPVHCAPP-ANRPTTGE 119 Query: 171 MEICRPIIMRQIELISP--KILLFIGNKTKN 199 + CRP +++++ L+ P + ++ +G Sbjct: 120 RDTCRPWLVQELRLLRPTLRSVVVLGGFGWQ 150 >gi|120610552|ref|YP_970230.1| hypothetical protein Aave_1872 [Acidovorax citrulli AAC00-1] gi|120589016|gb|ABM32456.1| conserved hypothetical protein [Acidovorax citrulli AAC00-1] Length = 199 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 60/181 (33%), Gaps = 16/181 (8%) Query: 78 HELKSLLRSFHDCHLCSTSL----STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 +L SL+ S +C LC+ SL + + G +++ G P + SG PF +G Sbjct: 6 PDLASLVHSVRNCTLCAGSLPLGPRPVL-QASAGARILVAGQAPGRKVHASGIPFDDASG 64 Query: 134 NMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--K 188 L + + +I I + +P R+ C + + P + Sbjct: 65 ERLRAWMGVDRDTFYDPGRIAIVPMGFCYPGTGRSGDLPPRPECASTWRKPLLQALPGIR 124 Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247 + + +G + A + + L HP + K++ Sbjct: 125 LTIVLGAHALAWH-GRRAPAPASLTDAVQDWRRDAPALWVLP--HPSP--RNNGWLKRHP 179 Query: 248 W 248 W Sbjct: 180 W 180 >gi|331698752|ref|YP_004334991.1| uracil-DNA glycosylase [Pseudonocardia dioxanivorans CB1190] gi|326953441|gb|AEA27138.1| Uracil-DNA glycosylase superfamily [Pseudonocardia dioxanivorans CB1190] Length = 209 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 24/168 (14%), Positives = 47/168 (27%), Gaps = 19/168 (11%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 +++IG P SG P++ +G L + L + + I P Sbjct: 40 HPQARIVLIGQAPGTRAQHSGIPWNDPSGVTLRRWLGVTDDEFYDPTLFAILPMDFYFPG 99 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSN 218 R EL ++ + IG + + + + + Sbjct: 100 KGAHGDLPPRPDVAPRWHPRLLTELPHVRLTVLIGRYAQKHYLPGATGTTLTDTVRAFRD 159 Query: 219 LCTPHSIIPTLATVHPQEL-----IQYPLIKKNTWHALITLKKALKNL 261 + VHP L + P AL L+ ++ + Sbjct: 160 HLPDR-----MPLVHPSPLNFRWQTRNP---WFAEEALPALRARVQAV 199 >gi|239831484|ref|ZP_04679813.1| uracil-DNA glycosylase superfamily protein [Ochrobactrum intermedium LMG 3301] gi|239823751|gb|EEQ95319.1| uracil-DNA glycosylase superfamily protein [Ochrobactrum intermedium LMG 3301] Length = 216 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 18/147 (12%), Positives = 41/147 (27%), Gaps = 22/147 (14%) Query: 105 TEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEI-------------MRTQ 149 L+I+G P N +G+PF+G G++L L Sbjct: 42 DTDVRLLIVGLAPGLRGANRTGRPFTGDYAGDLLYSTLSEFGFATGKFEARPDDSLRLLD 101 Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FFNNDA 206 I PP N+ + + + + + + ++ +G Sbjct: 102 ASIVNAVRCVPPENKPIGSEINNCRQFLSPMLTRFPNLQAVVTLGTIAHQSTVRALGAPV 161 Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVH 233 + + + + ++ H Sbjct: 162 ARHPFG----HDRASDIGTLRIFSSYH 184 >gi|319790830|ref|YP_004152470.1| uraciL-DNA glycosylase superfamily [Variovorax paradoxus EPS] gi|315593293|gb|ADU34359.1| uracil-DNA glycosylase superfamily [Variovorax paradoxus EPS] Length = 192 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 58/167 (34%), Gaps = 15/167 (8%) Query: 77 LHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 + L + +R C HL + + L+++G PS + + +G P++ K+G Sbjct: 1 MDALLTEIRDCRACAAHLPLGPRPVV--QTSATARLLLVGQAPSVTVHTTGVPWNDKSGE 58 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHP-PGNRNLSNIEMEICRPIIMRQIELIS-PKI 189 L + L + + T++ + + +P G E R + + ++ Sbjct: 59 QLRRWLGIDREVFYDATRVALMPMGFCYPGRGTSGDLPPRRECAELWQARLLAEMKQVEL 118 Query: 190 LLFIGNKTKNFFFN-NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 L IG + F + + ++ + HP Sbjct: 119 TLLIGQYAQRHFLGAARKAGVTETVEAFAEY-----GPRFIPLPHPS 160 >gi|296447263|ref|ZP_06889192.1| conserved hypothetical protein [Methylosinus trichosporium OB3b] gi|296255225|gb|EFH02323.1| conserved hypothetical protein [Methylosinus trichosporium OB3b] Length = 210 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 31/202 (15%), Positives = 62/202 (30%), Gaps = 31/202 (15%) Query: 84 LRSFHDC-------HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 + + C L + + L+I G P + SG PF +G+ L Sbjct: 13 IGACRICAERPVGPPLPHAPRPVV--RVSPMARLLIAGQAPGMRVHRSGLPFDDPSGDRL 70 Query: 137 DKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIELISPKI 189 + ++ ++I ++ +S P G E + L + Sbjct: 71 RSWMGVDRATFYDVSRIGVAAMSFCFPGYDAHGGDLPPRRECAREWHDALF-AALPQVET 129 Query: 190 LLFIGNKTKNFFFNNDAQKTY------QNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI 243 +L +G + + + +G+W L + HP + Sbjct: 130 ILAVGKYAQAYHLRRLGRPVPAGASVAATVGRWRELF--DLEPRIVPLPHPSW--RNSGW 185 Query: 244 -KKNTW---HALITLKKALKNL 261 K++ W AL L+ + L Sbjct: 186 LKRHPWFEAEALPALRAEVARL 207 >gi|323136673|ref|ZP_08071754.1| Uracil-DNA glycosylase superfamily [Methylocystis sp. ATCC 49242] gi|322397990|gb|EFY00511.1| Uracil-DNA glycosylase superfamily [Methylocystis sp. ATCC 49242] Length = 213 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 72/212 (33%), Gaps = 31/212 (14%) Query: 74 ACSLHELKSLLRSFHDC-------HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126 A L E+ + +R+ C L + + L+I P + N +G Sbjct: 6 ARKLDEVVARIRACRFCVETPEGAPL-PHEPRPVL-RVSSSARLLIASQAPGNLVNQTGL 63 Query: 127 PFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSN-IEMEICRPIIMRQI 182 PF+ +GN L + + + ++I I+ + P + + CR ++ Sbjct: 64 PFNDPSGNRLREWMGVDRETFYNVSRIAIAPMGFCFPGNDAAGGDLPPRRECRARWHDEL 123 Query: 183 ELISPK--ILLFIGNKTKNFFFNNDAQKTYQNLG------KWSNLCTPHSIIPTLATVHP 234 P+ +L IG +++ F + G +W + ++ HP Sbjct: 124 FAALPQIETVLAIGRYAQDYHFARLGHALPRGQGVSQIVARWRDF--QNARPLIFPLPHP 181 Query: 235 Q-----ELIQYPLIKKNTWHALITLKKALKNL 261 L + P + L L+K + L Sbjct: 182 SWRNTGWLKRNPWFEAEV---LPVLRKEVARL 210 >gi|207723284|ref|YP_002253683.1| uracil-dna glycosylase protein [Ralstonia solanacearum MolK2] gi|206588482|emb|CAQ35445.1| uracil-dna glycosylase protein [Ralstonia solanacearum MolK2] Length = 178 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 43/136 (31%), Gaps = 6/136 (4%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ---SIEIMRTQIHISMISPWHPP 161 ++I+G P + +G P++ ++G+ L + LQ +I + + P Sbjct: 13 DRRARVLIVGQAPGRIVHETGIPWNDRSGDRLRQWLQIGYDDFYADKRIAVVPMGFCFPG 72 Query: 162 GNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + C P R + P K+ L +G + ++F+ Sbjct: 73 TGPSGDLPPRPECAPQWHRPLLTAMPELKLALLVGGYAQRYYFDV-PPGWSLTDVVRHGP 131 Query: 220 CTPHSIIPTLATVHPQ 235 HP Sbjct: 132 VRDAEGRVLFPLPHPS 147 >gi|312864746|ref|ZP_07724977.1| uracil-DNA glycosylase family protein [Streptococcus downei F0415] gi|311099873|gb|EFQ58086.1| uracil-DNA glycosylase family protein [Streptococcus downei F0415] Length = 194 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 23/164 (14%), Positives = 45/164 (27%), Gaps = 14/164 (8%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + I+G P + ++ +G+ L L + P Sbjct: 32 PKTARINIVGQAPGIKAQDTRLYWNDPSGDNLRDWLGIDRDTFYNSDKIAVIPMDFYYPG 91 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + + EL + L IGN ++++ + + K Sbjct: 92 KGKSGDLPPRKGFAEKWHPLILQELPDISLTLLIGNYAQHYYLQQKSSVKLTDNVKAYKD 151 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258 P VHP + P K+ L L K + Sbjct: 152 FLPD----FFPLVHPSPRNNIWQKKNPWFKEEVLPDLKKLVKEI 191 >gi|332968003|gb|EGK07090.1| hypothetical protein HMPREF9374_3851 [Desmospora sp. 8437] Length = 67 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 4/64 (6%) Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 + +GN +FF + + G W + I T + HP + + P ++ Sbjct: 1 MCLGNVAVQWFFLDPEAEVRALRGSWHTV----REIGTRVSYHPLAVRRRPNLRSRFLED 56 Query: 251 LITL 254 L Sbjct: 57 WRAL 60 >gi|171463624|ref|YP_001797737.1| hypothetical protein Pnec_0925 [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193162|gb|ACB44123.1| conserved hypothetical protein [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 173 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 24/75 (32%), Gaps = 2/75 (2%) Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI-IPTLATVHPQELIQYPLIKK 245 P + + G Q L + IP +A+ +++ P K Sbjct: 99 PVVAMAFGGPAAQKITGERDPLP-QLRETVLALNIGNDEEIPVIASFELNQVLSRPKEKA 157 Query: 246 NTWHALITLKKALKN 260 W L+ + L+N Sbjct: 158 LLWQDLLLARSVLQN 172 >gi|325578790|ref|ZP_08148837.1| uracil DNA glycosylase [Haemophilus parainfluenzae ATCC 33392] gi|325159614|gb|EGC71746.1| uracil DNA glycosylase [Haemophilus parainfluenzae ATCC 33392] Length = 193 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 20/150 (13%), Positives = 46/150 (30%), Gaps = 13/150 (8%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + I+G P S ++ K+G+ L + L + + P Sbjct: 32 PTTARINIVGQAPGVKAQESRLYWNDKSGDRLREWLGVDRDTFYHSGMFAVIPMDFYYPG 91 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + + L + ++ + IG + ++ + + + + + Sbjct: 92 KGKSGDLPPRKGFAEKWHVPILANLPNIELTILIGQYAQKYYLPENELNVTETVRHFRDF 151 Query: 220 CTPHSIIPTLATVHPQELIQYPLI-KKNTW 248 L VHP + + KKN W Sbjct: 152 LPHF-----LPLVHPSP--RNQIWLKKNPW 174 >gi|218508557|ref|ZP_03506435.1| putative uracil DNA glycosylase protein [Rhizobium etli Brasil 5] Length = 77 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 9/77 (11%), Positives = 24/77 (31%), Gaps = 10/77 (12%) Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK--- 244 K+++ +G + + GK + T HP L++ P + Sbjct: 1 KLIVAMGATALAALTDVKGRLQ-DVRGKAMAIE---GGRTLFVTAHPSYLLRIPDERLKA 56 Query: 245 ---KNTWHALITLKKAL 258 ++ ++ + Sbjct: 57 EEMARFRQDMLEIQGLM 73 >gi|182678895|ref|YP_001833041.1| hypothetical protein Bind_1928 [Beijerinckia indica subsp. indica ATCC 9039] gi|182634778|gb|ACB95552.1| conserved hypothetical protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 225 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 29/190 (15%), Positives = 55/190 (28%), Gaps = 21/190 (11%) Query: 78 HELKSLLRSFHDCHLCST--------SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129 EL + S C LC + L+I P + +G F+ Sbjct: 18 DELAAYAASIRACTLCRDQPLKLPLPHPPRPVLRVSSTARLLIASQAPGVRVHQTGLSFN 77 Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNL---SNIEMEICRPIIMRQIE 183 +G+ L + + I +I I + P + Sbjct: 78 DASGDRLRGWMGVGRDIFYDEARIAIVPMGFCFPGHDAKKGDLPPRPECRQTWHDGLFGL 137 Query: 184 LISPKILLFIGNKTKNFFFNNDAQKTYQNLGK----WSNLCTPHSIIPTLATVHPQELIQ 239 + +++L IG +++ F + +NL + +A HP + Sbjct: 138 MPQIEMILAIGRYAQDYHFARLGRPLPKNLRVDDIIRRGAELSPASPRIVALPHPSW--R 195 Query: 240 YPLI-KKNTW 248 K+N W Sbjct: 196 NSGWLKRNPW 205 >gi|302387058|ref|YP_003822880.1| Uracil-DNA glycosylase superfamily [Clostridium saccharolyticum WM1] gi|302197686|gb|ADL05257.1| Uracil-DNA glycosylase superfamily [Clostridium saccharolyticum WM1] Length = 191 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 21/162 (12%), Positives = 52/162 (32%), Gaps = 22/162 (13%) Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL 166 + I+G P + ++ +G+ L + L + R + + P Sbjct: 33 DARIAIVGQAPGRKAEATQLFWNDLSGDRLREWL---GVSREIFYQTNRIAHLPMDFYYP 89 Query: 167 --------SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWS 217 + + E+ + +I++ IG+ + ++ N QK+ + + + Sbjct: 90 GKAKSGDAPPRKGFAEKWHPRLLDEMPNIEIIILIGSYAQKYYLNKKRQKSLTETVRNFQ 149 Query: 218 NLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITL 254 + VHP L + P + + L + Sbjct: 150 KYLPEY-----FPLVHPSPLNLGWLSRNPWFENDVLPVLKEI 186 >gi|329769975|ref|ZP_08261372.1| hypothetical protein HMPREF0433_01136 [Gemella sanguinis M325] gi|328837535|gb|EGF87162.1| hypothetical protein HMPREF0433_01136 [Gemella sanguinis M325] Length = 195 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 15/138 (10%), Positives = 42/138 (30%), Gaps = 9/138 (6%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 ++IIG P S F+ K+G L + + + + + + + P Sbjct: 33 PSTAKILIIGQAPGIKAQESRIFFNDKSGVKLREWMGIDDDIFYKSGLIGVVPMDFYYPG 92 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + + + ++++ +G ++++ + + + Sbjct: 93 KGKSGDLPPRKNSAPKWHKKVLELMPNIELIILVGKYAQDYYLKENKKSNLTE----TVF 148 Query: 220 CTPHSIIPTLATVHPQEL 237 VHP L Sbjct: 149 HYEEYGPLYFPIVHPSPL 166 >gi|294339724|emb|CAZ88086.1| putative Uracil-DNA glycosylase [Thiomonas sp. 3As] Length = 227 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 44/160 (27%), Gaps = 27/160 (16%) Query: 99 TICATQTEGQDLMIIGYTPS-DSDNISGKPFSGK-TGNMLDKML---------------- 140 + L+I G P N SG+PF+G G +L L Sbjct: 42 PVPPLGPLDAPLLIAGLAPGLKGANASGRPFTGDGAGPLLFGTLTELGLASRPVPVRIGD 101 Query: 141 ------QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE-LISPKILLFI 193 + IS PP N E+ C I +I + + ++++ + Sbjct: 102 HPSTLRADDGLQLHGCRISNAVKCLPPEN-KPLPAEIRTCNRFIAAEITAMTNLRVIVAL 160 Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 G + QK + + H Sbjct: 161 GKVAHDAVLMALGQKASSARFA-HAAEHRLGDYMLIDSYH 199 >gi|15902592|ref|NP_358142.1| hypothetical protein spr0548 [Streptococcus pneumoniae R6] gi|116517025|ref|YP_816044.1| hypothetical protein SPD_0543 [Streptococcus pneumoniae D39] gi|15458124|gb|AAK99352.1| Conserved hypothetical protein [Streptococcus pneumoniae R6] gi|116077601|gb|ABJ55321.1| conserved hypothetical protein [Streptococcus pneumoniae D39] Length = 192 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 46/165 (27%), Gaps = 15/165 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159 + + IIG P +G + K+G+ L L + + + + Sbjct: 32 PKTARINIIGQAPGLKTQEAGLYWKDKSGDRLRDWLGVDEDTFYNSGYFAVLPMDFYFPG 91 Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + +L + EL ++ L IG + ++ K Sbjct: 92 HGKSGDLPPRTGFAEKWHPQVLQELPDIQLTLLIGQYAQAYYLQEKISGKVTERVKHYKA 151 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKAL 258 P VHP + + P + L +K L Sbjct: 152 YLPAY----FPLVHPSPRNQIWMAKNPWFEAEVVPDLKKRIKTIL 192 >gi|218516758|ref|ZP_03513598.1| probable uracil-DNA glycosylase protein [Rhizobium etli 8C-3] Length = 166 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 52/158 (32%), Gaps = 17/158 (10%) Query: 77 LHELKSLLRSFHDC---HLCSTSLSTI-----CATQTEGQDLMIIGYTPSDSDNISGKPF 128 L L+ + + C + A + ++I G P + SG PF Sbjct: 7 LETLRREIAACRICRDAPAKGPAHRLPQEPRPVAVISSNARILIAGQAPGLRVHESGLPF 66 Query: 129 SGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSN-IEMEICRPIIMRQIEL 184 +G+ L L ++ R + I + P + ++ C P +++ Sbjct: 67 DDASGDRLRSWLGVDRASFYDRDRFAIVPMGFCFPGYDDKGADLPPRRECAPFWRQRVLS 126 Query: 185 ISPKI--LLFIGNKTKNFFFNNDAQKTY--QNLGKWSN 218 P+I +L IG + + Q G W + Sbjct: 127 AMPQIELVLVIGQYAQAWHMAGGGQGGMAETVRG-WRD 163 >gi|225858457|ref|YP_002739967.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae 70585] gi|225721616|gb|ACO17470.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae 70585] Length = 192 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 47/165 (28%), Gaps = 15/165 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159 + + IIG P +G + K+G+ L L + + + + Sbjct: 32 PKTARINIIGQAPGLKTQEAGLYWKDKSGDRLRDWLGVDEDTFYNSGYFAVLPMDFYFPG 91 Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + +L + + EL ++ L IG + ++ K Sbjct: 92 HGKSGDLPPRTGFAEKWHLQLLQELPDIQLTLLIGQYAQAYYLQEKISGKVTERVKHYKD 151 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKAL 258 P VHP + + P + L +K L Sbjct: 152 YLPAY----FPLVHPSPRNQIWMAKNPWFEAEVVPDLKKRIKTIL 192 >gi|331700508|ref|YP_004397467.1| uracil-DNA glycosylase [Lactobacillus buchneri NRRL B-30929] gi|329127851|gb|AEB72404.1| uracil-DNA glycosylase [Lactobacillus buchneri NRRL B-30929] Length = 195 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 43/138 (31%), Gaps = 9/138 (6%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 +++II PS S + +G+ L + + + P Sbjct: 32 DPQAEILIISQAPSRKAQASMVFWDDPSGDRLRDWMGLNKTEFYHSGKIAVMPLDFYYPG 91 Query: 165 NLSNIEMEICRPIIMR-----QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 ++ ++ + + ++ + K+ L IG + ++ N Q+ + Sbjct: 92 KGAHGDLPPRKGFAQKWHPPLLAQMPNIKLKLLIGQYAQKYYLGNRRQRNLTEKVRHFED 151 Query: 220 CTPHSIIPTLATVHPQEL 237 P VHP L Sbjct: 152 YLPDY----FPLVHPSPL 165 >gi|171779778|ref|ZP_02920734.1| hypothetical protein STRINF_01615 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281880|gb|EDT47314.1| hypothetical protein STRINF_01615 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 194 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 18/168 (10%), Positives = 49/168 (29%), Gaps = 17/168 (10%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + I+G P SG ++ +G+ L K L + + P Sbjct: 32 PKTARINIVGQAPGIRAQESGLYWNDPSGDNLRKWLGVDRETFYNSGLFAVVPMDYYFPG 91 Query: 165 NLSNIEME-----ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSN 218 + ++ + + ++ + +G+ + ++ + + + + Sbjct: 92 KGKSGDLAPRKGFADKWHKRTLALAPNIELHILVGSYAQRYYLKQKSSAKLTDTVKHYKD 151 Query: 219 LCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKALKN 260 VHP + P ++ L +K L+ Sbjct: 152 YLPEF-----FPLVHPSPRNNIWQRKNPWFEEEVIPDLQKRVKAILEK 194 >gi|227889481|ref|ZP_04007286.1| uracil DNA glycosylase superfamily protein [Lactobacillus johnsonii ATCC 33200] gi|227849959|gb|EEJ60045.1| uracil DNA glycosylase superfamily protein [Lactobacillus johnsonii ATCC 33200] Length = 195 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 21/158 (13%), Positives = 45/158 (28%), Gaps = 18/158 (11%) Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGN 163 + IIG P K + +G+ L L + + I I + ++P Sbjct: 35 SARINIIGQAPGRIAQEKMKFWDDPSGDRLRTWLGVSRDVFYNSGMIAILPMDFYYPGKG 94 Query: 164 RNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNF--FFNNDAQKTYQNLGKWSNL 219 ++ + Q+ + P ++ + +G + T K+ Sbjct: 95 KSGDLPPRKGFAQNWHPQLLKLMPDIQLTILVGAYATRSYLHLGYKDRLTDIVR-KYQQY 153 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALI 252 + VHP + P ++ L Sbjct: 154 LPDY-----FPIVHPSPRNKIWEAKNPWFEEQVIPDLQ 186 >gi|169838776|ref|ZP_02871964.1| hypothetical protein cdivTM_16991 [candidate division TM7 single-cell isolate TM7a] Length = 51 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 9/50 (18%), Positives = 22/50 (44%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126 ++LK + C L T ++ I E ++ + + S+ ++I + Sbjct: 2 WNDLKLEIDICTKCILERTRINPIVGEGNEKAQVLFVLDSVSEEEDIKQQ 51 >gi|270640648|ref|ZP_06222119.1| uracil-DNA glycosylase [Haemophilus influenzae HK1212] gi|270317352|gb|EFA28886.1| uracil-DNA glycosylase [Haemophilus influenzae HK1212] Length = 145 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 17/129 (13%), Positives = 36/129 (27%), Gaps = 10/129 (7%) Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL----- 166 I+G P S ++ K+G L + L + + P Sbjct: 2 IVGQAPGLKAEQSRLYWNDKSGERLREWLGVDYDYFYNSGMFSVLPMDFYYPGKGKSGDL 61 Query: 167 SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII 226 + R M L + ++ + IG + ++ + + + Sbjct: 62 PPRQGFAERWHSMILGHLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQFLPHF--- 118 Query: 227 PTLATVHPQ 235 + VHP Sbjct: 119 --MPLVHPS 125 >gi|153009966|ref|YP_001371181.1| uracil-DNA glycosylase superfamily protein [Ochrobactrum anthropi ATCC 49188] gi|151561854|gb|ABS15352.1| Uracil-DNA glycosylase superfamily [Ochrobactrum anthropi ATCC 49188] Length = 216 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 18/147 (12%), Positives = 42/147 (28%), Gaps = 22/147 (14%) Query: 105 TEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEI-------------MRTQ 149 + L+I+G P N +G+PF+G G++L L Sbjct: 42 DDDVRLLIVGLAPGLRGANRTGRPFTGDYAGDLLYSTLCEFGFATGKFEARPDDSLRLLD 101 Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FFNNDA 206 I PP N+ + + ++ + + ++ +G Sbjct: 102 ASIVNAVRCVPPENKPIGAEINNCRQFLLPMLTRFRNLQAIVTLGTIAHQSTVRALGAPV 161 Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVH 233 + + + + ++ H Sbjct: 162 ARHPFG----HDRASDIGSLRIFSSYH 184 >gi|322411293|gb|EFY02201.1| hypothetical protein SDD27957_02585 [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 191 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 22/163 (13%), Positives = 49/163 (30%), Gaps = 18/163 (11%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + ++I+G P + ++ ++G L L + I P Sbjct: 29 PKTARIIIVGQAPGIVAQETKLYWNDRSGIRLRDWLGVDNDTFYHSGLFGIIPMDFYYPG 88 Query: 165 NLSNIEMEICRPI---IMRQIELISPKI--LLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + ++ + + P++ + +G ++F+ N A KT + Sbjct: 89 KGKSGDLPPRNGFAAKWHPPLRELMPEVELTILVGRYAQDFYLGNKAYKTLTETVRHFAD 148 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKA 257 P VHP L + P L+ + + Sbjct: 149 YLPDY----FPLVHPSPRNQLWLAKNPW----FEQDLLPILQK 183 >gi|284165374|ref|YP_003403653.1| hypothetical protein Htur_2097 [Haloterrigena turkmenica DSM 5511] gi|284015029|gb|ADB60980.1| hypothetical protein Htur_2097 [Haloterrigena turkmenica DSM 5511] Length = 210 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 20/167 (11%), Positives = 48/167 (28%), Gaps = 24/167 (14%) Query: 97 LSTICATQTEGQDLMIIGYTPSDSDNI-SGKPFSG-KTGNMLDKMLQSIEI--------M 146 + + D +IG P +G PF+G ++G + ++ +++ Sbjct: 26 RTAVFGYGDANADFHLIGDHPDVHGGRSTGVPFTGTESGVAIQEVARAVGFADGPFDRPD 85 Query: 147 RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206 ++ S I P S+ ++ I+ ILL +G + + Sbjct: 86 LENLYCSYIHMCCLPAGETPSDESYADLERFFDAELRAINAHILLPVGERATDHVLREYT 145 Query: 207 QKTYQN---LGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250 + ++ + + + P W Sbjct: 146 TQRHRIDLDMAALHATEIRGRGFLIVPI-------REPTE----WED 181 >gi|322372885|ref|ZP_08047421.1| uracil DNA glycosylase family protein [Streptococcus sp. C150] gi|321277927|gb|EFX54996.1| uracil DNA glycosylase family protein [Streptococcus sp. C150] Length = 194 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 24/199 (12%), Positives = 59/199 (29%), Gaps = 32/199 (16%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQ--------DLMIIGYTPSDSDNISGK 126 +L EL + + + + Q + I+G P SG Sbjct: 2 ETLEELTQAIMA--------DEQNKVYTEQGIKPLFTIPKTARINIVGQAPGIRAQESGL 53 Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISP--WHPPGNRNL---SNIEMEICRPIIMRQ 181 ++ +G+ L + + + I P ++ PG+ + + Sbjct: 54 YWNDPSGDNLRDWMGVSREEFYESGMFAIVPMDFYFPGHGKSGDLPPRKGFADKWHKRVL 113 Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQ----- 235 + ++ + +GN + ++ + + + + + + L VHP Sbjct: 114 ALAPNIQLTILVGNYAQRYYLHQKSSAKLTDTVKHYKDYLPDY-----LPLVHPSPRNNI 168 Query: 236 ELIQYPLIKKNTWHALITL 254 + P + L L Sbjct: 169 WQAKNPWFMEEVVPDLKAL 187 >gi|306831211|ref|ZP_07464372.1| uracil DNA glycosylase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426777|gb|EFM29888.1| uracil DNA glycosylase [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 194 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 21/166 (12%), Positives = 47/166 (28%), Gaps = 15/166 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + I+G P SG ++ +G+ L K L + + + P Sbjct: 32 PKTARINIVGQAPGIRAQESGLYWNDPSGDNLRKWLGVDREIFYDSGLFAVVPMDYYFPG 91 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + + ++ + +G+ + ++ + T K Sbjct: 92 TGKSGDLPPRKGFAEKWHKRTLAFAPNIELHILVGSYAQRYYLQQKSSATLTETVKHYRA 151 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKALK 259 P VHP + K L +K+ L+ Sbjct: 152 YLPE----FFPLVHPSPRNNLWQARNLWFAKEVIPDLQKRVKEILE 193 >gi|111114835|ref|YP_709453.1| hypothetical protein BAPKO_0012 [Borrelia afzelii PKo] gi|216263757|ref|ZP_03435751.1| conserved hypothetical protein [Borrelia afzelii ACA-1] gi|110890109|gb|ABH01277.1| hypothetical protein BAPKO_0012 [Borrelia afzelii PKo] gi|215979801|gb|EEC20623.1| conserved hypothetical protein [Borrelia afzelii ACA-1] Length = 199 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 7/79 (8%) Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 +I +PK +L + +FF N + + IP + T P I+ Sbjct: 126 EINNKNPKAILSC--EEIDFFLNQPLRIQI-----VRGIELRFKGIPLVFTYLPTNQIKN 178 Query: 241 PLIKKNTWHALITLKKALK 259 P +KK W L +K +K Sbjct: 179 PELKKEIWQDLKIIKGIIK 197 >gi|239502679|ref|ZP_04661989.1| putative DNA polymerase III alpha chain [Acinetobacter baumannii AB900] Length = 421 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 20/150 (13%), Positives = 57/150 (38%), Gaps = 2/150 (1%) Query: 78 HELKSLLRSFHDCHLCSTSLSTIC-ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 L +R C+ C + + M++ P+ + GK G++ + Sbjct: 242 ASLVEHMRDCKQCNGCDLAGQVHPDIRLGKKMRFMVVSDCPTWEEEKKGKLLEGESAQYV 301 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 ++ E+ + + + ++ L+ ++ C P + ++IEL+ P +++ +G++ Sbjct: 302 KAAIKENELAVADGYYTTLVK-AKKQDKFLTTGQINGCSPHLAKEIELLKPPVIVALGSQ 360 Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSII 226 + + + +G + I Sbjct: 361 SIRYLLPDVKVSPSDLVGMTFYNPKLDATI 390 >gi|327470897|gb|EGF16353.1| uracil DNA glycosylase [Streptococcus sanguinis SK330] Length = 194 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 21/167 (12%), Positives = 49/167 (29%), Gaps = 20/167 (11%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + I+G P +G + K+G+ L + L E M + P Sbjct: 32 PKNARINIVGQAPGLKTQEAGLYWKDKSGDRLREWLGVDEEMFYNSGYFAVLPMDFYFPG 91 Query: 165 NLSNIEMEICRPIIMRQIELISP--------KILLFIGNKTKNFFFNNDAQKTYQNLGKW 216 + + ++ + + P ++ + IG + ++ + + Sbjct: 92 HGKSGDLPPRKDFADK---WHQPILELLPDIELTILIGQYAQKYYLHQKGNIKLTETVQH 148 Query: 217 SNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258 P VHP + + P + L L + + Sbjct: 149 YQDYLPD----FFPLVHPSPRNQIWMAKNPWFEAEVVPDLQALVQKI 191 >gi|332523813|ref|ZP_08400065.1| uracil-DNA glycosylase family protein [Streptococcus porcinus str. Jelinkova 176] gi|332315077|gb|EGJ28062.1| uracil-DNA glycosylase family protein [Streptococcus porcinus str. Jelinkova 176] Length = 190 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 21/167 (12%), Positives = 58/167 (34%), Gaps = 17/167 (10%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPP 161 + ++I+G P + ++ ++G L + L + + I + ++P Sbjct: 29 PKNAKIVIVGQAPGIVAQETKLFWNDRSGLKLRQWLGVDEETFYHSGKFAILPMDFYYPG 88 Query: 162 GNR--NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + +L + + L + ++++ +G + ++ ++ K Sbjct: 89 KGKGGDLPPRKYFAQKWHQPLLDLLPNVELVILVGQYAQAYYLGKTKKENLTETVKAYQD 148 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKNL 261 P VHP L + P ++ + L++ + NL Sbjct: 149 YLP----RFFPLVHPSPRNQLWLKRNPWFEEEV---VPVLQEKVANL 188 >gi|309972656|gb|ADO95857.1| Conserved hypothetical protein [Haemophilus influenzae R2846] Length = 195 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 21/164 (12%), Positives = 46/164 (28%), Gaps = 15/164 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + I+G P S ++ K+G L + L + + P Sbjct: 33 PKTARINIVGQAPGLKAEQSRLYWNDKSGERLREWLGVDYDYFYNSGMFSVLPMDFYYPG 92 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + R M L + ++ + IG + ++ + + + Sbjct: 93 KGKSGDLPPRQGFAERWHPMILGHLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQF 152 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258 + VHP + + P + L L K + Sbjct: 153 LPHF-----IPLVHPSPRNQLWITKNPWFGEQIIPELQILVKQI 191 >gi|296135585|ref|YP_003642827.1| Uracil-DNA glycosylase superfamily [Thiomonas intermedia K12] gi|295795707|gb|ADG30497.1| Uracil-DNA glycosylase superfamily [Thiomonas intermedia K12] Length = 227 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 44/160 (27%), Gaps = 27/160 (16%) Query: 99 TICATQTEGQDLMIIGYTPS-DSDNISGKPFSGK-TGNMLDKML---------------- 140 + L+I G P N SG+PF+G G +L L Sbjct: 42 PVPPLGPLDAPLLIAGLAPGLKGANASGRPFTGDGAGPLLFGTLTELGLASRPVPVRIGD 101 Query: 141 ------QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE-LISPKILLFI 193 + IS PP N E+ C I +I + + ++++ + Sbjct: 102 HPSTLRADDGLQLHGCRISNAVKCLPPEN-KPLPAEIRTCNRFIAAEITAMPNLRVIVAL 160 Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233 G + +K + + H Sbjct: 161 GKVAHDAVLMALGRKASSARFA-HAAEHRLGDYMLIDSYH 199 >gi|298528005|ref|ZP_07015409.1| DNA-directed DNA polymerase [Desulfonatronospira thiodismutans ASO3-1] gi|298511657|gb|EFI35559.1| DNA-directed DNA polymerase [Desulfonatronospira thiodismutans ASO3-1] Length = 914 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 19/148 (12%), Positives = 44/148 (29%), Gaps = 12/148 (8%) Query: 87 FHDCHLCSTSLSTICATQTEGQ--DLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIE 144 +C + D++++G P D G + + +LD++ + Sbjct: 4 CDEC-RHKGQTR---YNGKDRGELDILVVGDAPGKVDCRRGHYTASQYLAVLDQIRRLKP 59 Query: 145 IMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204 ++ ++ ++ C P + + PK LL +G F Sbjct: 60 SYTVGQEFALGCK----PEDSVKAQDISHCSPRLHEIVSRTKPKALLLLGVNAARAF--G 113 Query: 205 DAQKTYQNLGKWSNLCTPHSIIPTLATV 232 + G L + +A+ Sbjct: 114 INKNQLAIRGNIIELNVEGHPVKAVASY 141 >gi|315612736|ref|ZP_07887647.1| uracil DNA glycosylase [Streptococcus sanguinis ATCC 49296] gi|315314846|gb|EFU62887.1| uracil DNA glycosylase [Streptococcus sanguinis ATCC 49296] Length = 205 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 20/168 (11%), Positives = 50/168 (29%), Gaps = 17/168 (10%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159 + + I+G P +G + K+G+ L L + + + + Sbjct: 41 PKTARINIVGQAPGLKTQEAGIYWKDKSGDRLRDWLGVDEDTFYNSGYFAVLPMDFYFPG 100 Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL-GKWSN 218 + +L + E + ++ L IG + ++ + ++ + Sbjct: 101 HGKSGDLPPRTDFAEKWHPQLLKECPNIELTLLIGQYAQAYYLQEKISGKVTDRVHRFKD 160 Query: 219 LCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALI-TLKKALKN 260 + VHP + + P + L ++K L Sbjct: 161 YLPDY-----FPLVHPSPRNQIWMAKNPWFESEVVPDLKNRIQKILGE 203 >gi|224534872|ref|ZP_03675441.1| conserved hypothetical protein [Borrelia spielmanii A14S] gi|224513812|gb|EEF84137.1| conserved hypothetical protein [Borrelia spielmanii A14S] Length = 203 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 7/79 (8%) Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 +I +PK +L + +FF N + + IP + T P I+ Sbjct: 130 EISNKNPKAILSC--EEIDFFLNQPLRIQI-----VRGIELRFKGIPLVLTYLPTNQIKN 182 Query: 241 PLIKKNTWHALITLKKALK 259 P +KK W L +K +K Sbjct: 183 PELKKEIWQDLKIIKGIIK 201 >gi|307243670|ref|ZP_07525810.1| uracil DNA glycosylase family protein [Peptostreptococcus stomatis DSM 17678] gi|306492879|gb|EFM64892.1| uracil DNA glycosylase family protein [Peptostreptococcus stomatis DSM 17678] Length = 191 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 46/137 (33%), Gaps = 8/137 (5%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNML--DKMLQSIEIMRTQIHISMISPWHPPG 162 + ++I+G P S PF+ K+G L + +I I + ++P Sbjct: 31 DKEARILIVGQAPGKKVEESLIPFNDKSGETLISWMGIDKDTFYSKEIAIVPMDFYYPGK 90 Query: 163 NRNL--SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220 + + EL + ++ + IG + +++ +K + + Sbjct: 91 AKTGDLPPRKFIAQEYHGPILKELNNIELTILIGKYSMDYYLKGRTKKNLTETVRCFDEY 150 Query: 221 TPHSIIPTLATVHPQEL 237 P VHP L Sbjct: 151 LP----KYFPIVHPSPL 163 >gi|320546577|ref|ZP_08040892.1| uracil DNA glycosylase [Streptococcus equinus ATCC 9812] gi|320448962|gb|EFW89690.1| uracil DNA glycosylase [Streptococcus equinus ATCC 9812] Length = 194 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 17/168 (10%), Positives = 53/168 (31%), Gaps = 17/168 (10%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + I+G P SG ++ +G+ L + L + + + + P Sbjct: 32 PKTARINIVGQAPGIRAQESGLYWNDPSGDNLRRWLGVDREIFYESGLFAVVPMDFYFPG 91 Query: 165 NLSNIEME-----ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSN 218 + ++ + + ++ + +G+ + ++ + + + + + Sbjct: 92 KGKSGDLAPRKGFADKWHKRTLDLAPNIELHILVGSYAQRYYLQQKSSAKLTETVKHYKD 151 Query: 219 LCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKALKN 260 VHP + P ++ L +++ LK Sbjct: 152 YLPEF-----FPVVHPSPRNNIWQRKNPWFEQEVIPDLQKRVREILKK 194 >gi|91790977|ref|YP_551928.1| uracil-DNA glycosylase superfamily protein [Polaromonas sp. JS666] gi|91700857|gb|ABE47030.1| Uracil-DNA glycosylase superfamily [Polaromonas sp. JS666] Length = 194 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 26/176 (14%), Positives = 57/176 (32%), Gaps = 20/176 (11%) Query: 80 LKSLLRSFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDK 138 L + + S +C + ++II P + SG P+ ++G L + Sbjct: 8 LHAEISSCTNCAPNLPLGPRPVVQFG-RTARILIISQAPGTKVHASGIPWDDQSGARLRE 66 Query: 139 MLQ---SIEIMRTQIHISMISPWHP-PGNRNLSNIEMEICRPIIMRQIELISP-KILLFI 193 L ++ I + +P G E R + + P ++ L + Sbjct: 67 WLGISPQDFYNPEKVAIMPMGFCYPGKGKSGDLPPRPECAPLWHDRILAQLPPDRLTLLV 126 Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-ELIQYPLIKKNTW 248 G+ + ++ A + + A+ P L+ +P + +W Sbjct: 127 GSYAQAYYLPQTAHRLLT------------DKVEAFASFLPAFFLLPHPSWRCVSW 170 >gi|320096247|ref|ZP_08027831.1| uracil-DNA glycosylase [Actinomyces sp. oral taxon 178 str. F0338] gi|319976828|gb|EFW08587.1| uracil-DNA glycosylase [Actinomyces sp. oral taxon 178 str. F0338] Length = 217 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 18/153 (11%), Positives = 48/153 (31%), Gaps = 14/153 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + ++++G P + KP++ +G +L + L + + + P Sbjct: 42 SAESRIVLVGQAPGRIAQRTRKPWNDPSGRLLRQWLGVTDQQFYDPALFALMPMDFYFPG 101 Query: 165 NLSNIEME-----ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 ++ + + ++ + +G + ++ A +T +N Sbjct: 102 KGTHGDQPPRKDFAPTWHPRLLALMPRVRLTILVGAYAQRYYLGAAAGRTLTE--TVANA 159 Query: 220 CTPHSIIPTLATVHPQEL-----IQYPLIKKNT 247 VHP L + P ++ T Sbjct: 160 ADAPEGF--FPLVHPSPLNIAWRKRNPWFEQET 190 >gi|239813142|ref|YP_002942052.1| uracil-DNA glycosylase superfamily [Variovorax paradoxus S110] gi|239799719|gb|ACS16786.1| Uracil-DNA glycosylase superfamily [Variovorax paradoxus S110] Length = 192 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 64/195 (32%), Gaps = 19/195 (9%) Query: 77 LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 + L + +R C L + A + L+I+G PS + + +G P+ K+G Sbjct: 1 MDALLAEIRGCTACAAQLPLGPRPVVQA--SASARLLIVGQAPSLTVHATGLPWDDKSGE 58 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHP--PGNRNLSNIEMEICRPIIMRQIELISPKI 189 L + L + + +I I + +P + +L ++ ++ Sbjct: 59 QLRRWLGIEREVFYDAARIAIMPMGYCYPGRGSSGDLPPRRECAELWHARLLAQMSRVEL 118 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248 L IG + F + + + HP + K + W Sbjct: 119 TLLIGQYAQRHFLGAARKAGVTE----TVAAFAEFAPRFIPLPHPSP--RNTGWFKHHPW 172 Query: 249 ---HALITLKKALKN 260 L L++ ++ Sbjct: 173 FESEVLPVLRERVRQ 187 >gi|227499818|ref|ZP_03929913.1| uracil-DNA glycosylase [Anaerococcus tetradius ATCC 35098] gi|227218122|gb|EEI83390.1| uracil-DNA glycosylase [Anaerococcus tetradius ATCC 35098] Length = 190 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 46/139 (33%), Gaps = 12/139 (8%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + L+IIG P +G F K+G L L I++ R I P Sbjct: 31 HKQSKLLIIGQAPGLKVEQTGILFDDKSGERLVDWL-GIDMKRLHGPEISILPMDFYYPG 89 Query: 165 NLSNIEMEICRPIIMRQIE------LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218 + + R I R+ L + K+ + IG ++ F+ +K + Sbjct: 90 KGKAGD-KAPRRFIAREYHPYLLDELNNIKLTILIGAYSQRFYLKEKFKKNLTETVRAYK 148 Query: 219 LCTPHSIIPTLATVHPQEL 237 P VHP L Sbjct: 149 QYLPEY----FPIVHPSSL 163 >gi|322387284|ref|ZP_08060894.1| uracil DNA glycosylase [Streptococcus infantis ATCC 700779] gi|321141813|gb|EFX37308.1| uracil DNA glycosylase [Streptococcus infantis ATCC 700779] Length = 201 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 22/168 (13%), Positives = 53/168 (31%), Gaps = 17/168 (10%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159 + + IIG P +G + K+G+ L + L + + + + Sbjct: 37 PKTARINIIGQAPGLKTQEAGLYWKDKSGDRLREWLGVDEDTFYNSGYFAVMPMDFYFPG 96 Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL-GKWSN 218 + +L + EL ++ L IG + ++ + + ++ + Sbjct: 97 HGKSGDLPPRPGFAEKWHPKLLKELPDIQLTLLIGQYAQAYYLHEKVSGKVTDRVHRFKD 156 Query: 219 LCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKALKN 260 + VHP + + P + + L ++K L Sbjct: 157 YLPDY-----FPLVHPSPRNQIWMKKNPWFEADVLPDLKERIQKILGE 199 >gi|225376150|ref|ZP_03753371.1| hypothetical protein ROSEINA2194_01787 [Roseburia inulinivorans DSM 16841] gi|225211977|gb|EEG94331.1| hypothetical protein ROSEINA2194_01787 [Roseburia inulinivorans DSM 16841] Length = 182 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 58/165 (35%), Gaps = 17/165 (10%) Query: 82 SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS--GKTGNMLDKM 139 +R C LC + + + +G + ++ P S TG ++ K+ Sbjct: 3 EQIRRCQKCGLCFNQKPLL--DTEKECHVFWVGLSAKKMESDEEVPLSPETNTGMLIQKI 60 Query: 140 LQSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 + + + + P R + E++ C ++ +I+++SPKI+ +G Sbjct: 61 EELCG--EVITYKTNLVKCLPLTEEQKLRYPNRKEIDSCFEHLVGEIQVMSPKIVFLLG- 117 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHS---IIPTLATVHPQEL 237 +++ + N KW + + HP + Sbjct: 118 ---EKVYSSVGKHLKINFEKWDEFEYHYKKYEGTYYVPIHHPSYI 159 >gi|301793812|emb|CBW36204.1| uracil DNA glycosylase superfamily protein [Streptococcus pneumoniae INV104] gi|332204644|gb|EGJ18709.1| hypothetical protein SPAR120_0609 [Streptococcus pneumoniae GA47901] Length = 192 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 47/165 (28%), Gaps = 15/165 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + IIG P +G + K+G+ L L E + P Sbjct: 32 PKTARINIIGQAPGLKTQEAGLYWKDKSGDRLRDWLGVDEDTFYNSGYFAVLPMDFYFPG 91 Query: 165 NLSNIEMEICRPI---IMRQIELISP--KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + ++ C Q+ P ++ L IG + ++ K Sbjct: 92 HGKSGDLPPCTGFAEKWHPQLLQELPDIQLTLLIGQYAQAYYLQEKISGKVTERVKHYKD 151 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKAL 258 P VHP + + P + L +K L Sbjct: 152 YLPAY----FPLVHPSPRNQIWMAKNPWFEAEVVPDLKKRIKTIL 192 >gi|296327705|ref|ZP_06870246.1| uracil-DNA glycosylase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296155191|gb|EFG95967.1| uracil-DNA glycosylase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 197 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 48/149 (32%), Gaps = 10/149 (6%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP--WHPPG 162 + ++I+G P + + K+G+ L E ++ I P ++ PG Sbjct: 35 PKEARIVIVGQAPGIKAQENRLYWKDKSGDKLRVWTGINEKTFYSSNLLAIIPMDFYYPG 94 Query: 163 NRNLSNIEMEICRPIIMRQIE---LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 ++ L + ++ + +G + F+ + N K Sbjct: 95 KGKSGDLPPRKDFGDKWHHKILELLPNVELFILVGKYAQEFYLKGKIKDNLTNTVKAYKE 154 Query: 220 CTPHSIIPTLATVHPQELIQYPLIKKNTW 248 P VHP + +KKN W Sbjct: 155 YLP----KFFPIVHPSP-LNIGWLKKNLW 178 >gi|19704594|ref|NP_604156.1| Uracil-DNA glycosylase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19714888|gb|AAL95455.1| hypothetical protein FN1259 [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 197 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 48/149 (32%), Gaps = 10/149 (6%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP--WHPPG 162 + ++I+G P + + K+G+ L E ++ I P ++ PG Sbjct: 35 PKEARIVIVGQAPGIKAQENRLYWKDKSGDKLRVWTGINEKTFYSSNLLAIIPMDFYYPG 94 Query: 163 NRNLSNIEMEICRPIIMRQIE---LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 ++ L + ++ + +G + F+ + N K Sbjct: 95 KGKSGDLPPRKDFGDKWHHKILELLPNVELFILVGKYAQEFYLKGKIKDNLTNTVKAYKE 154 Query: 220 CTPHSIIPTLATVHPQELIQYPLIKKNTW 248 P VHP + +KKN W Sbjct: 155 YLP----KFFPIVHPSP-LNIGWLKKNLW 178 >gi|315634857|ref|ZP_07890139.1| uracil-DNA glycosylase [Aggregatibacter segnis ATCC 33393] gi|315476409|gb|EFU67159.1| uracil-DNA glycosylase [Aggregatibacter segnis ATCC 33393] Length = 193 Score = 45.1 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 16/147 (10%), Positives = 42/147 (28%), Gaps = 15/147 (10%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + I+G P + ++ ++G+ L + L + + + P Sbjct: 32 PTTARINIVGQAPGTKAEQTRLYWNDQSGDRLREWLGVDREVFYHSGLFAVIPMDFYYPG 91 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + +L ++ + IG + ++ + + + + Sbjct: 92 KGKSGDLPPRKGFAEKWHSQILADLPHIELTILIGQYAQKYYLPQNKLNVTETVKNYRIF 151 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYP 241 L VHP L + P Sbjct: 152 LPHF-----LPLVHPSPRNQLWLAKNP 173 >gi|229823131|ref|ZP_04449200.1| hypothetical protein GCWU000282_00428 [Catonella morbi ATCC 51271] gi|229787297|gb|EEP23411.1| hypothetical protein GCWU000282_00428 [Catonella morbi ATCC 51271] Length = 194 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 59/165 (35%), Gaps = 16/165 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + L+I+G P + +G+P+ ++G+ L + L + I P Sbjct: 33 PKAARLVIVGQAPGLATQEAGRPWDDRSGDRLREWLGMNRSTFYDSDLLAILPMDFYYPG 92 Query: 165 NLSNIEMEICRPI---IMRQIELISP--KILLFIGNKTKNFFF-NNDAQKTYQNLGKWSN 218 + ++ + QI P ++ L +G ++++ + + + + + Sbjct: 93 KGKSGDLPPRKGFAAKWHPQILAQLPEVRLTLLVGRYAQDYYLAKSKRSNLTETVAHYQD 152 Query: 219 LCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258 + VHP L Q+P ++ L L +A+ Sbjct: 153 YLPDY-----FPLVHPSPLNQRWLKQHPWFEQEVVPDLQKLVQAI 192 >gi|15900532|ref|NP_345136.1| hypothetical protein SP_0624 [Streptococcus pneumoniae TIGR4] gi|111657228|ref|ZP_01407999.1| hypothetical protein SpneT_02001561 [Streptococcus pneumoniae TIGR4] gi|149005734|ref|ZP_01829473.1| hypothetical protein CGSSp18BS74_09215 [Streptococcus pneumoniae SP18-BS74] gi|168482856|ref|ZP_02707808.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae CDC1873-00] gi|168490488|ref|ZP_02714631.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae CDC0288-04] gi|303260116|ref|ZP_07346089.1| hypothetical protein CGSSp9vBS293_01510 [Streptococcus pneumoniae SP-BS293] gi|303261300|ref|ZP_07347248.1| hypothetical protein CGSSp14BS292_08175 [Streptococcus pneumoniae SP14-BS292] gi|303263965|ref|ZP_07349886.1| hypothetical protein CGSSpBS397_05142 [Streptococcus pneumoniae BS397] gi|303265955|ref|ZP_07351851.1| hypothetical protein CGSSpBS457_00800 [Streptococcus pneumoniae BS457] gi|303268338|ref|ZP_07354135.1| hypothetical protein CGSSpBS458_02419 [Streptococcus pneumoniae BS458] gi|307126821|ref|YP_003878852.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae 670-6B] gi|14972100|gb|AAK74776.1| conserved hypothetical protein [Streptococcus pneumoniae TIGR4] gi|147762674|gb|EDK69634.1| hypothetical protein CGSSp18BS74_09215 [Streptococcus pneumoniae SP18-BS74] gi|172043622|gb|EDT51668.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae CDC1873-00] gi|183574956|gb|EDT95484.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae CDC0288-04] gi|302637434|gb|EFL67921.1| hypothetical protein CGSSp14BS292_08175 [Streptococcus pneumoniae SP14-BS292] gi|302638811|gb|EFL69273.1| hypothetical protein CGSSpBS293_01510 [Streptococcus pneumoniae SP-BS293] gi|302642176|gb|EFL72526.1| hypothetical protein CGSSpBS458_02419 [Streptococcus pneumoniae BS458] gi|302644539|gb|EFL74790.1| hypothetical protein CGSSpBS457_00800 [Streptococcus pneumoniae BS457] gi|302646370|gb|EFL76596.1| hypothetical protein CGSSpBS397_05142 [Streptococcus pneumoniae BS397] gi|306483883|gb|ADM90752.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae 670-6B] gi|332077051|gb|EGI87513.1| hypothetical protein SPAR148_0584 [Streptococcus pneumoniae GA17545] gi|332203780|gb|EGJ17847.1| hypothetical protein SPAR93_0651 [Streptococcus pneumoniae GA47368] Length = 192 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 46/165 (27%), Gaps = 15/165 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159 + + IIG P +G + K+G+ L L + + + + Sbjct: 32 PKTARINIIGQAPGLKTQEAGLYWKDKSGDRLRDWLGVDEDTFYNSGYFAVLPMDFYFPG 91 Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + +L + EL ++ L IG + ++ K Sbjct: 92 HGKSGDLPPRTGFAEKWHPQVLQELPDIQLTLLIGQYAQAYYLQEKISGKVTERVKHYKD 151 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKAL 258 P VHP + + P + L +K L Sbjct: 152 YLPAY----FPLVHPSPRNQIWMAKNPWFEAEVVPDLKKRIKTIL 192 >gi|291006475|ref|ZP_06564448.1| putative DNA polymerase related protein [Saccharopolyspora erythraea NRRL 2338] Length = 83 Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 33/83 (39%), Gaps = 10/83 (12%) Query: 184 LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP----TLATVHPQELIQ 239 ++ P+I++ +G +D + + G + + P LAT HP +++ Sbjct: 1 MVRPEIVVCLGATAAQALMGSDF-RISKERGVLLDFPEIAGVEPRPASLLATTHPSAVVR 59 Query: 240 YPLIKKNTWH----ALITLKKAL 258 P ++ + L + AL Sbjct: 60 APD-RREAYRGLLSDLEVVAAAL 81 >gi|322374738|ref|ZP_08049252.1| uracil DNA glycosylase family protein [Streptococcus sp. C300] gi|321280238|gb|EFX57277.1| uracil DNA glycosylase family protein [Streptococcus sp. C300] Length = 196 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 22/167 (13%), Positives = 50/167 (29%), Gaps = 15/167 (8%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159 + + I+G P +G + K+GN L + L + + + + Sbjct: 32 PKTARINIVGQAPGLKTQEAGIYWKDKSGNRLREWLGVDEDTFYNSGYFAVLPMDFYFPG 91 Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + +L + + E + ++ L IG + ++ + K Sbjct: 92 HGKSGDLPPRKGFAEKWHPQLLKECPNIELTLLIGQYAQAYYLHEKVSGKVTERVKHY-- 149 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKALKN 260 + VHP + + P + L ++K L Sbjct: 150 --KDHLPEYFPLVHPSPRNQIWMAKNPWFESEVVPDLKKRIQKILGE 194 >gi|295426504|ref|ZP_06819154.1| uracil DNA glycosylase [Lactobacillus amylolyticus DSM 11664] gi|295063872|gb|EFG54830.1| uracil DNA glycosylase [Lactobacillus amylolyticus DSM 11664] Length = 195 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 20/158 (12%), Positives = 45/158 (28%), Gaps = 18/158 (11%) Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGN 163 + IIG P K + +G+ L L + + I I + ++P Sbjct: 35 SARINIIGQAPGRIAQEKMKFWDDPSGDRLRIWLGVSRDVFYNSGMIAILPMDFYYPGKG 94 Query: 164 RNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNF--FFNNDAQKTYQNLGKWSNL 219 ++ + Q+ + P ++ + +G + T + Sbjct: 95 KSGDLPPRKGFAQNWHPQLLKLMPDIQLTILVGAYATRSYLHLGYKDRLTDIVR-NYQQY 153 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALI 252 + +VHP + P ++ L Sbjct: 154 LPDY-----FPSVHPSPRNKIWEAKNPWFEEQVIPDLQ 186 >gi|227544308|ref|ZP_03974357.1| uracil DNA glycosylase superfamily protein [Lactobacillus reuteri CF48-3A] gi|300909498|ref|ZP_07126959.1| uracil DNA glycosylase [Lactobacillus reuteri SD2112] gi|227185716|gb|EEI65787.1| uracil DNA glycosylase superfamily protein [Lactobacillus reuteri CF48-3A] gi|300893363|gb|EFK86722.1| uracil DNA glycosylase [Lactobacillus reuteri SD2112] Length = 195 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 20/158 (12%), Positives = 44/158 (27%), Gaps = 18/158 (11%) Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGN 163 + IIG P K + +G+ L L + + I I + ++P Sbjct: 35 SARINIIGQAPGRIAQEKMKFWDDPSGDRLRTWLGVSRDVFYNSGMIAILPMDFYYPGKG 94 Query: 164 RNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNF--FFNNDAQKTYQNLGKWSNL 219 ++ + Q+ + P ++ + +G + T + Sbjct: 95 KSGDLPPRKGFAQNWHPQLLKLMPDIQLTILVGAYATRSYLHLGYKDRLTDIVR-NYQQY 153 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALI 252 + VHP + P ++ L Sbjct: 154 LPDY-----FPIVHPSPRNKIWEAKNPWFEEQVIPDLQ 186 >gi|148984004|ref|ZP_01817323.1| hypothetical protein CGSSp3BS71_07719 [Streptococcus pneumoniae SP3-BS71] gi|147924151|gb|EDK75263.1| hypothetical protein CGSSp3BS71_07719 [Streptococcus pneumoniae SP3-BS71] gi|301799668|emb|CBW32228.1| uracil DNA glycosylase superfamily protein [Streptococcus pneumoniae OXC141] Length = 194 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 22/159 (13%), Positives = 43/159 (27%), Gaps = 14/159 (8%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159 + + IIG P +G + K+G+ L L + + + + Sbjct: 32 PKTARINIIGQAPGLKTQEAGLYWKDKSGDRLRDWLGVDEDTFYNSGYFAVLPMDFYFPG 91 Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + +L + EL ++ L IG + ++ K Sbjct: 92 HGKSGDLPPRTGFAEKWHPQLLQELPDIQLTLLIGQYAQAYYLQEKISGKVTERVKHYKD 151 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT 253 P VHP + + P + L Sbjct: 152 YLPAY----FPLVHPSPRNQIWMAKNPWFEAEVVPDLKK 186 >gi|148988990|ref|ZP_01820390.1| hypothetical protein CGSSp6BS73_02415 [Streptococcus pneumoniae SP6-BS73] gi|148992269|ref|ZP_01821992.1| 50S ribosomal protein L11 [Streptococcus pneumoniae SP9-BS68] gi|149010758|ref|ZP_01832129.1| 50S ribosomal protein L11 [Streptococcus pneumoniae SP19-BS75] gi|149021584|ref|ZP_01835639.1| hypothetical protein CGSSp23BS72_06949 [Streptococcus pneumoniae SP23-BS72] gi|168488308|ref|ZP_02712507.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae SP195] gi|168492784|ref|ZP_02716927.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae CDC3059-06] gi|169833041|ref|YP_001694101.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae Hungary19A-6] gi|182683555|ref|YP_001835302.1| hypothetical protein SPCG_0585 [Streptococcus pneumoniae CGSP14] gi|194398008|ref|YP_002037282.1| hypothetical protein SPG_0567 [Streptococcus pneumoniae G54] gi|221231446|ref|YP_002510598.1| uracil DNA glycosylase superfamily protein [Streptococcus pneumoniae ATCC 700669] gi|225854154|ref|YP_002735666.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae JJA] gi|225856322|ref|YP_002737833.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae P1031] gi|225860620|ref|YP_002742129.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae Taiwan19F-14] gi|237649865|ref|ZP_04524117.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae CCRI 1974] gi|237821271|ref|ZP_04597116.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae CCRI 1974M2] gi|298229350|ref|ZP_06963031.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255484|ref|ZP_06979070.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502416|ref|YP_003724356.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae TCH8431/19A] gi|303253948|ref|ZP_07340069.1| uracil DNA glycosylase superfamily protein [Streptococcus pneumoniae BS455] gi|147765239|gb|EDK72168.1| 50S ribosomal protein L11 [Streptococcus pneumoniae SP19-BS75] gi|147925487|gb|EDK76564.1| hypothetical protein CGSSp6BS73_02415 [Streptococcus pneumoniae SP6-BS73] gi|147928895|gb|EDK79907.1| 50S ribosomal protein L11 [Streptococcus pneumoniae SP9-BS68] gi|147930280|gb|EDK81265.1| hypothetical protein CGSSp23BS72_06949 [Streptococcus pneumoniae SP23-BS72] gi|168995543|gb|ACA36155.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae Hungary19A-6] gi|182628889|gb|ACB89837.1| hypothetical protein SPCG_0585 [Streptococcus pneumoniae CGSP14] gi|183572915|gb|EDT93443.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae SP195] gi|183576922|gb|EDT97450.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae CDC3059-06] gi|194357675|gb|ACF56123.1| conserved hypothetical protein [Streptococcus pneumoniae G54] gi|220673906|emb|CAR68412.1| uracil DNA glycosylase superfamily protein [Streptococcus pneumoniae ATCC 700669] gi|225722389|gb|ACO18242.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae JJA] gi|225726275|gb|ACO22127.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae P1031] gi|225726739|gb|ACO22590.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae Taiwan19F-14] gi|298238011|gb|ADI69142.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae TCH8431/19A] gi|301801491|emb|CBW34183.1| uracil DNA glycosylase superfamily protein [Streptococcus pneumoniae INV200] gi|302599124|gb|EFL66149.1| uracil DNA glycosylase superfamily protein [Streptococcus pneumoniae BS455] gi|327390357|gb|EGE88698.1| hypothetical protein SPAR5_0599 [Streptococcus pneumoniae GA04375] gi|332076457|gb|EGI86920.1| hypothetical protein SPAR68_0644 [Streptococcus pneumoniae GA41301] gi|332202499|gb|EGJ16568.1| hypothetical protein SPAR69_0610 [Streptococcus pneumoniae GA41317] Length = 192 Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 46/165 (27%), Gaps = 15/165 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159 + + IIG P +G + K+G+ L L + + + + Sbjct: 32 PKTARINIIGQAPGLKTQEAGLYWKDKSGDRLRDWLGVDEDTFYNSGYFAVLPMDFYFPG 91 Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + +L + EL ++ L IG + ++ K Sbjct: 92 HGKSGDLPPRTGFAEKWHPQLLQELPDIQLTLLIGQYAQAYYLQEKISGKVTERVKHYKD 151 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKAL 258 P VHP + + P + L +K L Sbjct: 152 YLPAY----FPLVHPSPRNQIWMAKNPWFEAEVVPDLKKRIKTIL 192 >gi|325690628|gb|EGD32631.1| uracil DNA glycosylase [Streptococcus sanguinis SK115] Length = 194 Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 23/197 (11%), Positives = 60/197 (30%), Gaps = 22/197 (11%) Query: 76 SLHEL-KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 +L ++ K+++ + + + A + + I+G P +G + K+G+ Sbjct: 3 TLDDITKAIMADPENKEFTKQGIKPLFAA-PKNARINIVGQAPGLKTQEAGLYWKDKSGD 61 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP------- 187 L + L E + P + + ++ + + P Sbjct: 62 RLREWLDVDEDTFYNSGYFAVLPMDFYFPGHGKSGDLPPRKDFADK---WHQPILELLPD 118 Query: 188 -KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYP 241 ++ + IG + ++ + + P VHP + + P Sbjct: 119 IELTILIGQYAQKYYLHQTGNIKLTETVQHYQDYLPD----FFPLVHPSPRNQIWIAKNP 174 Query: 242 LIKKNTWHALITLKKAL 258 + L L + + Sbjct: 175 WFAEQVVPDLQALVQKI 191 >gi|261415155|ref|YP_003248838.1| hypothetical protein Fisuc_0746 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371611|gb|ACX74356.1| hypothetical protein Fisuc_0746 [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326286|gb|ADL25487.1| hypothetical protein FSU_1184 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 308 Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 34/244 (13%), Positives = 73/244 (29%), Gaps = 61/244 (25%) Query: 8 SQEQILTIALFYADSGV-YWVFDEP------------NNEATYESQRKEKSIDSAIQPIT 54 ++ D G + DEP + ++ + A P Sbjct: 6 DFSELRKYLQGQMDMGEEDLLLDEPWTLTRKKSAAPAPVRPANPMPQMQRPANPAPFPQH 65 Query: 55 NIRHIHSPLVQQADSIAQKACSLH------------------------------------ 78 + +P+ QQ+ + + Sbjct: 66 SAPANPAPIPQQSPFQSPAQSAFQQPSFGAPAQPAPSPHPAPAPKLDAGLTIAPRAVKKT 125 Query: 79 ----ELKSLLRSFHDC----HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130 EL + +F+D L + + + + E L+I+ P F Sbjct: 126 TAAYELADSIVAFYDALKTDPLYARATNVVRYEGPEHPRLLILLAAP-KPGETGNNFFQS 184 Query: 131 KTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190 TG ML ++ S+ + + ++ R LS I + R ++ +++ I+P+I+ Sbjct: 185 PTGEMLVRLFGSLGYVPDSLGVTYFYK---DAPRALSPILLASLRRMLTKELSFIAPEIM 241 Query: 191 LFIG 194 + G Sbjct: 242 MTFG 245 >gi|227530281|ref|ZP_03960330.1| uracil DNA glycosylase superfamily protein [Lactobacillus vaginalis ATCC 49540] gi|227349804|gb|EEJ40095.1| uracil DNA glycosylase superfamily protein [Lactobacillus vaginalis ATCC 49540] Length = 195 Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 20/157 (12%), Positives = 47/157 (29%), Gaps = 16/157 (10%) Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHP--P 161 + IIG P K + +G+ L L + + I I + ++P Sbjct: 35 SARINIIGQAPGRIAQEKMKFWDDPSGDRLRAWLGVSRDVFYNSGMIAILPMDFYYPGKG 94 Query: 162 GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLC 220 G+ +L + + + + ++ + +G + + + + + Sbjct: 95 GSSDLPPRKDFAPKWHPQLLKLMPNIQLTILVGAYATRRYLHLRYKDRLTDVVRNYRQYL 154 Query: 221 TPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALI 252 + VHP + P K+ L Sbjct: 155 PDY-----FPIVHPSPRNQVWESKNPWFKQKVIPDLQ 186 >gi|58336872|ref|YP_193457.1| hypothetical protein LBA0545 [Lactobacillus acidophilus NCFM] gi|227903431|ref|ZP_04021236.1| uracil DNA glycosylase superfamily protein [Lactobacillus acidophilus ATCC 4796] gi|58254189|gb|AAV42426.1| hypothetical protein LBA0545 [Lactobacillus acidophilus NCFM] gi|227868751|gb|EEJ76172.1| uracil DNA glycosylase superfamily protein [Lactobacillus acidophilus ATCC 4796] Length = 195 Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 20/158 (12%), Positives = 44/158 (27%), Gaps = 18/158 (11%) Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGN 163 + IIG P K + +G+ L L + + I I + ++P Sbjct: 35 SARINIIGQAPGRIAQEKMKFWDDPSGDRLRTWLGVSRDVFYNSGMIAILPMDFYYPGKG 94 Query: 164 RNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNF--FFNNDAQKTYQNLGKWSNL 219 ++ + Q+ + P ++ + +G + T + Sbjct: 95 KSGDLPPRKGFAQNWHPQLLKLMPDIQLTILVGAYATRSYLHLGYKDRLTDIVR-NYQQY 153 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALI 252 + VHP + P ++ L Sbjct: 154 LPDY-----FPIVHPSPRNKIWEAKNPWFEEQVIPDLQ 186 >gi|302335999|ref|YP_003801206.1| Uracil-DNA glycosylase superfamily [Olsenella uli DSM 7084] gi|301319839|gb|ADK68326.1| Uracil-DNA glycosylase superfamily [Olsenella uli DSM 7084] Length = 209 Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 18/166 (10%), Positives = 49/166 (29%), Gaps = 15/166 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + ++IIG P + P++ ++G+ L + L I P Sbjct: 45 SASARIVIIGQAPGRVAQDTRVPWNDRSGDRLREWLGMDRDTFYDPSKVAIIPMDFYFPG 104 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + + + ++ + +G+ + + + + ++ + Sbjct: 105 TGKSGDLPPRKGFAEKWHPILLQMMPQVELTVLVGSYAVHHYLGLKSSISLTSVVQDYRS 164 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKALK 259 P VHP + P + L + + L+ Sbjct: 165 YLPAR----FPLVHPSPRNQIWMRNNPWFAEEVLPDLRATVARILR 206 >gi|134100722|ref|YP_001106383.1| putative DNA polymerase related protein [Saccharopolyspora erythraea NRRL 2338] gi|133913345|emb|CAM03458.1| putative DNA polymerase related protein [Saccharopolyspora erythraea NRRL 2338] Length = 82 Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 32/82 (39%), Gaps = 10/82 (12%) Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP----TLATVHPQELIQY 240 + P+I++ +G +D + + G + + P LAT HP +++ Sbjct: 1 MRPEIVVCLGATAAQALMGSDF-RISKERGVLLDFPEIAGVEPRPASLLATTHPSAVVRA 59 Query: 241 PLIKKNTWH----ALITLKKAL 258 P ++ + L + AL Sbjct: 60 PD-RREAYRGLLSDLEVVAAAL 80 >gi|152983063|ref|YP_001352670.1| uracil-DNA glycosylase [Janthinobacterium sp. Marseille] gi|151283140|gb|ABR91550.1| uracil-DNA glycosylase [Janthinobacterium sp. Marseille] Length = 194 Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 25/174 (14%), Positives = 55/174 (31%), Gaps = 18/174 (10%) Query: 80 LKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 L + + + +C +L + + ++II P + SG P+ ++G L Sbjct: 8 LHAEIAACTNCAPNLPLGPRPVV--QFSRTARILIISQAPGTKVHASGIPWDDQSGARLR 65 Query: 138 KMLQ---SIEIMRTQIHISMISPWHP-PGNRNLSNIEMEICRPIIMRQIELISPKIL-LF 192 + L ++ I + +P G E + + + P L L Sbjct: 66 EWLGISPQDFYNPEKVAIMPMGFCYPGKGKSGDLPPRPECAPLWHDKILAQLPPDHLTLL 125 Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHP-----QELIQYP 241 +G+ + + A + + + P HP + + P Sbjct: 126 VGSYAQARYLPPTAPRLQTDRVEAFASFLPA----FFPLPHPSWRCVSWMTRNP 175 >gi|307710663|ref|ZP_07647096.1| uracil DNA glycosylase superfamily protein [Streptococcus mitis SK564] gi|307618606|gb|EFN97749.1| uracil DNA glycosylase superfamily protein [Streptococcus mitis SK564] Length = 196 Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 24/167 (14%), Positives = 46/167 (27%), Gaps = 15/167 (8%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159 + + IIG P +G + K+G+ L L + + + + Sbjct: 32 PKTARINIIGQAPGLKTQKAGLYWKDKSGDRLRNWLGVDEDTFYDSGYFAVLPMDFYFPG 91 Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + +L + EL ++ L IG + ++ K Sbjct: 92 HGKSGDLPPRAGFAEKWHPQLLQELPDIQLTLLIGQYAQTYYLKEKISGKVTERVKHYQN 151 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKALKN 260 P VHP + + P + L +K L Sbjct: 152 YLPTY----FPLVHPSPRNQIWMAKNPWFEAEVVPDLKKRIKTILGE 194 >gi|149002306|ref|ZP_01827248.1| hypothetical protein CGSSp14BS69_01654 [Streptococcus pneumoniae SP14-BS69] gi|147759621|gb|EDK66612.1| hypothetical protein CGSSp14BS69_01654 [Streptococcus pneumoniae SP14-BS69] gi|332074427|gb|EGI84903.1| hypothetical protein SPAR50_0608 [Streptococcus pneumoniae GA17570] Length = 194 Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 22/159 (13%), Positives = 43/159 (27%), Gaps = 14/159 (8%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159 + + IIG P +G + K+G+ L L + + + + Sbjct: 32 PKTARINIIGQAPGLKTQEAGLYWKDKSGDRLRDWLGVDEDTFYNSGYFAVLPMDFYFPG 91 Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + +L + EL ++ L IG + ++ K Sbjct: 92 HGKSGDLPPRTGFAEKWHPQLLQELPDIQLTLLIGQYAQAYYLQEKISGKVTERVKHYKD 151 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT 253 P VHP + + P + L Sbjct: 152 YLPAY----FPLVHPSPRNQIWMAKNPWFEAEVVPDLKK 186 >gi|269468887|gb|EEZ80479.1| hypothetical protein Sup05_1041 [uncultured SUP05 cluster bacterium] Length = 139 Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 16/29 (55%) Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALK 259 T HP E++ +K+ W L LK+ LK Sbjct: 111 TYHPSEILVNEQLKREAWEVLKNLKQCLK 139 >gi|256826497|ref|YP_003150456.1| uracil-DNA glycosylase [Cryptobacterium curtum DSM 15641] gi|256582640|gb|ACU93774.1| uracil-DNA glycosylase [Cryptobacterium curtum DSM 15641] Length = 200 Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 22/165 (13%), Positives = 55/165 (33%), Gaps = 17/165 (10%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHP- 160 ++I+G P + ++ ++G+ L L + ++ I + + P Sbjct: 38 HAEARIVIVGQAPGRIAQDTHMVWNDRSGDRLRDWLGIDRETFYTSDKLAIMPMDFYFPG 97 Query: 161 -PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSN 218 + +L + + + ++ + +GN + + + + + + Sbjct: 98 TGKSGDLPPRKGFADKWHPALLALMPHVELTVLVGNYATHAYLHLKSSAKLTDIVHNYQR 157 Query: 219 LCTPHSIIPTLATVHPQELIQYPLI-KKNTW---HALITLKKALK 259 L VHP + + KKN W L L+K + Sbjct: 158 YLPER-----LPLVHPSP--RNQIWMKKNPWFGAEVLPELQKRVA 195 >gi|157374660|ref|YP_001473260.1| phage SPO1 DNA polymerase domain-containing protein [Shewanella sediminis HAW-EB3] gi|157317034|gb|ABV36132.1| phage SPO1 DNA polymerase domain protein [Shewanella sediminis HAW-EB3] Length = 214 Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 25/197 (12%), Positives = 50/197 (25%), Gaps = 35/197 (17%) Query: 78 HELKSLLRSFHDCHLCSTSLSTIC---ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 L +L+ C LC L + ++I G P + G PF +G+ Sbjct: 7 DTLDALINQISACQLCRAELPYPPKPIIQVSADAKILIAGQAPGQKAHEQGLPFKDVSGD 66 Query: 135 MLDKMLQSIEIMRTQIHISMISPW---------HPPGNRNLSNIEMEICRPIIMRQIEL- 184 L L ++ I P + + Sbjct: 67 RLRSWLGVTSSQFYDPNLFAILPMGFCFPGNIIRNGKKAGDKPPIPLCAKSWRQAILSHL 126 Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNL------------GKWSNLCTPHSIIPTLATV 232 ++ + +G ++ +ND + + W + Sbjct: 127 DKVELTVILGQYAIDYHLDNDTPDSDKCSKKSSKISVTSAVASWKQYWPSQ-----IVLP 181 Query: 233 HPQ-----ELIQYPLIK 244 HP L ++P + Sbjct: 182 HPSPRNNIWLKRHPEFE 198 >gi|326792102|ref|YP_004309923.1| uracil-DNA glycosylase superfamily [Clostridium lentocellum DSM 5427] gi|326542866|gb|ADZ84725.1| Uracil-DNA glycosylase superfamily [Clostridium lentocellum DSM 5427] Length = 193 Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 22/162 (13%), Positives = 61/162 (37%), Gaps = 11/162 (6%) Query: 82 SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS--GKTGNMLDKM 139 ++ C+L + E D+M +G + + G P + TG ++ ++ Sbjct: 3 KQIKQCQKCNLYQN--QPPLIEECEACDVMWVGLSAKKITDNKGMPLAPSTNTGKIIAEI 60 Query: 140 LQSIEIMRTQIHISMISPWHPPGNR----NLSNIEMEICRPIIMRQIELISPKILLFIGN 195 ++I + + + + P + E+ +C ++ +I+ + PK++ +G Sbjct: 61 EETIG--LDKSYKTNLVKCAPLDDNSKLRYPKKEEVGVCIENLIVEIKYLQPKVIFLLGT 118 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237 + K +++ ++ + I + HP + Sbjct: 119 QVKEAIEQYYEINFPKSV-EYDFISLSIDNIKFVPIQHPSYI 159 >gi|125718099|ref|YP_001035232.1| Uracil-DNA glycosylase [Streptococcus sanguinis SK36] gi|323351478|ref|ZP_08087132.1| uracil DNA glycosylase [Streptococcus sanguinis VMC66] gi|125498016|gb|ABN44682.1| Uracil-DNA glycosylase, putative [Streptococcus sanguinis SK36] gi|322121964|gb|EFX93690.1| uracil DNA glycosylase [Streptococcus sanguinis VMC66] gi|325687560|gb|EGD29581.1| uracil DNA glycosylase [Streptococcus sanguinis SK72] gi|332361107|gb|EGJ38911.1| uracil DNA glycosylase [Streptococcus sanguinis SK1056] Length = 194 Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 20/164 (12%), Positives = 50/164 (30%), Gaps = 14/164 (8%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + I+G P +G + K+G+ L + L E M + P Sbjct: 32 PKNARINIVGQAPGLKTQEAGLYWKDKSGDRLREWLSVDEEMFYNSGYFAVLPMDFYFPG 91 Query: 165 NLSNIEMEICRPIIMR-QIELISP----KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + ++ + + ++ ++ + IG + ++ + + Sbjct: 92 HGKSGDLPPRKDFADKWHQPILKLLPDIELTILIGQYAQKYYLHQKGNIKLTETVQHYQD 151 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258 P VHP + + P + L L + + Sbjct: 152 YLPD----FFPLVHPSPRNQIWMAKNPWFAEQVVPDLQALVQKI 191 >gi|224531855|ref|ZP_03672487.1| conserved hypothetical protein [Borrelia valaisiana VS116] gi|224511320|gb|EEF81726.1| conserved hypothetical protein [Borrelia valaisiana VS116] Length = 200 Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 18/44 (40%) Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 + IP + T P I+ P +KK W L +K +K Sbjct: 155 VRGIELRFKGIPLVFTYLPTNQIKNPELKKEIWQDLKIIKGIIK 198 >gi|51598276|ref|YP_072464.1| hypothetical protein BG0013 [Borrelia garinii PBi] gi|51572847|gb|AAU06872.1| hypothetical protein BG0013 [Borrelia garinii PBi] Length = 196 Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 18/44 (40%) Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 + IP + T P I+ P +KK W L +K +K Sbjct: 151 VRGIELRFKGIPLVFTYLPTNQIKNPELKKEIWQDLKIIKGIIK 194 >gi|195978548|ref|YP_002123792.1| uracil-DNA glycosylase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975253|gb|ACG62779.1| uracil-DNA glycosylase [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 191 Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 20/166 (12%), Positives = 53/166 (31%), Gaps = 15/166 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + ++I+G P + ++ ++G L L + Q + + P Sbjct: 29 PQTARIVIVGQAPGIVAQETRLYWNDRSGVRLRAWLGVDDRTFYQSGLFGVLPMDFYYPG 88 Query: 165 NLSNIEMEICRPIIMR-----QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + ++ + + + ++++ +G + ++ + + Sbjct: 89 KGKSGDLPPRKGFAAKWHGPLMALMPQVELVVLVGQYAQQYYLGKGCRCNLTETVQHFED 148 Query: 220 CTPHSIIPTLATVHPQELIQYPLI-KKNTW--HALI-TLKKALKNL 261 P VHP + L KN W L+ LK ++ + Sbjct: 149 YLPDY----FPLVHPSP--RNQLWLAKNAWFEEELVPVLKDKVRQI 188 >gi|324992803|gb|EGC24723.1| uracil DNA glycosylase [Streptococcus sanguinis SK405] gi|327460240|gb|EGF06577.1| uracil DNA glycosylase [Streptococcus sanguinis SK1057] Length = 194 Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 21/167 (12%), Positives = 49/167 (29%), Gaps = 20/167 (11%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + I+G P +G + K+G+ L + L E + + P Sbjct: 32 PKNARINIVGQAPGLKTQQAGLYWKDKSGDRLREWLGVDEEIFYHSGYFAVLPMDFYFPG 91 Query: 165 NLSNIEMEICRPIIMRQIELISP--------KILLFIGNKTKNFFFNNDAQKTYQNLGKW 216 + + ++ + R P ++ + IG + ++ + + Sbjct: 92 HGKSGDLPPRKGFAER---WHQPILELLPDIELTILIGQYAQKYYLHQKGNIKLTETVQH 148 Query: 217 SNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258 P VHP + + P + L L + + Sbjct: 149 YQDYLPD----FFPLVHPSPRNQIWMAKNPWFAEQVVPDLQALVQKI 191 >gi|168485735|ref|ZP_02710243.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae CDC1087-00] gi|183571207|gb|EDT91735.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae CDC1087-00] Length = 192 Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 46/165 (27%), Gaps = 15/165 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159 + + IIG P +G + K+G+ L L + + + + Sbjct: 32 PKTARINIIGQAPGLKTQEAGLYWKDKSGDRLRDWLGVDEDTFYNSGYFAVLPMDFYFPG 91 Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + +L + EL ++ L IG + ++ K Sbjct: 92 HGKSGDLPPRTGFAEKWHPQLLQELPDIQLTLLIGQYAQAYYLQEKISGKVTERVKHYKD 151 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKAL 258 P VHP + + P + L +K L Sbjct: 152 YLPAY----FPLVHPSPRNQIWMTKNPWFEAEVVPDLKKRIKTIL 192 >gi|332362184|gb|EGJ39986.1| uracil DNA glycosylase [Streptococcus sanguinis SK49] Length = 194 Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 23/164 (14%), Positives = 51/164 (31%), Gaps = 14/164 (8%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP--WHPPG 162 + + I+G P +G + K+G+ L + L E + P ++ PG Sbjct: 32 PKNARINIVGQAPGLKTQQAGLYWKDKSGDRLREWLGVDEETFYHSGYFAVLPMDFYFPG 91 Query: 163 NRNLSNIEMEICRPIIMRQIE---LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + ++ Q+ L ++ + IG + ++ + + Sbjct: 92 HGKSGDLPPRKDFADKWHQLILELLPDIELTILIGQYAQKYYLHQKGNIKLTETVQHYQD 151 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258 P VHP + + P + L L + + Sbjct: 152 YLPD----FFPLVHPSPRNQIWMAKNPWFTEQVVPDLQALVQKI 191 >gi|269216638|ref|ZP_06160492.1| uracil DNA glycosylase family protein [Slackia exigua ATCC 700122] gi|269129872|gb|EEZ60955.1| uracil DNA glycosylase family protein [Slackia exigua ATCC 700122] Length = 232 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 21/148 (14%), Positives = 46/148 (31%), Gaps = 12/148 (8%) Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP----- 161 G + IIG P + P++ ++G+ L L I P Sbjct: 72 GARIAIIGQAPGRVAQEARMPWNDRSGDRLRDWLGIDRDTFYDPEKIAIIPMDFYFPGSG 131 Query: 162 GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221 + +L + + + ++ + +G+ + + + ++ + Sbjct: 132 KSGDLPPRKGFAEKWHPKLFALMPDIRLTVLVGSYATRTYLGLKSSASLTDVVRNHAAYL 191 Query: 222 PHSIIPTLATVHPQELIQYPLI-KKNTW 248 P VHP + + KKN W Sbjct: 192 PD----FFPLVHPSP--RNQIWMKKNPW 213 >gi|94501847|ref|ZP_01308358.1| putative uracil-DNA glycosylase family protein [Oceanobacter sp. RED65] gi|94425980|gb|EAT10977.1| putative uracil-DNA glycosylase family protein [Oceanobacter sp. RED65] Length = 211 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 25/195 (12%), Positives = 67/195 (34%), Gaps = 32/195 (16%) Query: 80 LKSLLRSFHDC----HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 L + ++ C L + ++ +++IIG P + + +PF +G Sbjct: 3 LHAEIQHCLICQSNLPLPP---RPVL-QFSQNSNILIIGQAPGQKAHHAHQPFKDASGKR 58 Query: 136 LDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQI--ELISPKIL 190 L + L +S ++ + ++ +P ++ IC +++ + +++ Sbjct: 59 LREWLGLTESEFYDADKVALMPMAFCYPGKGKSGDLPPPPICHQTWHKRLLDHMQKIQLV 118 Query: 191 LFIGNKTKNFFFNN-------DAQKTYQNLGKWSNLCTPHSIIP---------TLATVHP 234 + +G ++ + ++ + + + +A HP Sbjct: 119 VLLGQYSQRHYLTQATDFPWLKPSESERCQKLYKQYNNLADRVANQSTSLPESIMALPHP 178 Query: 235 QELIQYPLI-KKNTW 248 + L KKN W Sbjct: 179 SP--RNQLWLKKNPW 191 >gi|167624706|ref|YP_001675000.1| hypothetical protein Shal_2788 [Shewanella halifaxensis HAW-EB4] gi|167354728|gb|ABZ77341.1| conserved hypothetical protein [Shewanella halifaxensis HAW-EB4] Length = 201 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 55/177 (31%), Gaps = 28/177 (15%) Query: 75 CSLHELKSLLRSFHDC----HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130 + +L++ + C L I + ++I G P + G+PF Sbjct: 5 RNFIQLQADIAQCQICSEFLPLEP---KPIVQLG-KYAKILIAGQAPGQKTHYKGRPFGD 60 Query: 131 KTGNMLDKML---QSIEIMRTQIHISMISPWHP---------PGNRNLSNIEMEICRPII 178 +G L L + I + +P G++ + R + Sbjct: 61 ASGERLRTWLGVTKEQFYDPNLFAILPMGFCYPGSYTSADKQSGDKPPRPECAKKWRQDV 120 Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 + ++E I ++ L +G + Q++ W L TL HP Sbjct: 121 LNRLEHI--ELTLLVGKYAIEWHLKQKLSV-TQSVANWQALWPN-----TLVMPHPS 169 >gi|83594973|ref|YP_428725.1| uracil-DNA glycosylase superfamily protein [Rhodospirillum rubrum ATCC 11170] gi|83577887|gb|ABC24438.1| Uracil-DNA glycosylase superfamily [Rhodospirillum rubrum ATCC 11170] Length = 199 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 25/188 (13%), Positives = 54/188 (28%), Gaps = 27/188 (14%) Query: 90 CHLCST----SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML----- 140 C LC+ + + L+I+G P + +G P++ +G+ L + Sbjct: 22 CTLCAAHLPLGPRPVF-RVSVTARLLIVGQAPGTRVHATGIPWNDASGDRLRAWMGVDRE 80 Query: 141 ---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197 + I + G+ + +P + I+ L +G Sbjct: 81 TFYDARRIAVVPTGLCYPGRLAKGGDAPPRPDCAPLWQPAFRAVLPGIAL--TLLVGGYA 138 Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW---HALIT 253 + F+ T + HP + ++ W L Sbjct: 139 QGFYLGRRDSMTERVH------RFDQGDPAFFPLPHPSW--RNTAWINRHPWFEAEVLPA 190 Query: 254 LKKALKNL 261 L++ + L Sbjct: 191 LRERVAAL 198 >gi|251793993|ref|YP_003008725.1| hypothetical protein NT05HA_2336 [Aggregatibacter aphrophilus NJ8700] gi|247535392|gb|ACS98638.1| hypothetical protein NT05HA_2336 [Aggregatibacter aphrophilus NJ8700] Length = 193 Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 17/153 (11%), Positives = 45/153 (29%), Gaps = 15/153 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + I+G P + ++ K+G+ L + L + + P Sbjct: 32 PTSARINIVGQAPGVKAEQTRLYWNDKSGDRLREWLGVDRETFYHSDLFAVIPMDFYYPG 91 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + +L + ++ + IG + ++ + + + ++ Sbjct: 92 KGKSGDLPPRKGFAEKWHPQILADLPNIELTILIGQYAQKYYLPENTLNVTETVQNYAKF 151 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNT 247 L VHP L + P ++ Sbjct: 152 LPHF-----LPLVHPSPRNQLWLAKNPWFEQEV 179 >gi|307708325|ref|ZP_07644792.1| uracil-DNA glycosylase superfamily [Streptococcus mitis NCTC 12261] gi|307615771|gb|EFN94977.1| uracil-DNA glycosylase superfamily [Streptococcus mitis NCTC 12261] Length = 192 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 46/165 (27%), Gaps = 15/165 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + IIG P +G + K+G+ L L E + P Sbjct: 32 PKTARINIIGQAPGLKTQEAGLYWKDKSGDRLRDWLGVDEDTFYNSGYFAVLPMDFYFPG 91 Query: 165 NLSNIEMEICRPI---IMRQIELISP--KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + ++ Q+ P ++ L IG + ++ K Sbjct: 92 HGKSGDLPPRADFAEKWHPQLLQELPDIQLTLLIGQYAQAYYLQEKVSGKVTERVKHYQN 151 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKAL 258 P VHP + + P + L +K L Sbjct: 152 YLPTY----FPLVHPSPRNQIWMAKNPWFEAEVVPDLKKRIKTIL 192 >gi|149186996|ref|ZP_01865304.1| hypothetical protein ED21_25141 [Erythrobacter sp. SD-21] gi|148829385|gb|EDL47828.1| hypothetical protein ED21_25141 [Erythrobacter sp. SD-21] Length = 172 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 49/141 (34%), Gaps = 9/141 (6%) Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP--- 157 A+ + L+IIG P + +G P+ K+G+ L + + + P Sbjct: 8 VASFSPTARLLIIGQAPGSIVHQTGIPWDDKSGDRLREWTGLSKEQMYDPTRVALVPMGF 67 Query: 158 WHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQKTYQNLGK 215 +P C P R++ + P ++ L +G ++++ + + + + Sbjct: 68 CYPGKASGGDKPPRPECAPQWHRRVLDVLPEDRLTLLVGTYAQSYYLPDARKLSMTERVR 127 Query: 216 WSNLCTPHSIIPTLATVHPQE 236 P L HP Sbjct: 128 RFREFLP----RFLPLPHPAW 144 >gi|187917896|ref|YP_001883459.1| hypothetical protein BH0013 [Borrelia hermsii DAH] gi|119860744|gb|AAX16539.1| hypothetical protein BH0013 [Borrelia hermsii DAH] Length = 192 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 27/79 (34%), Gaps = 7/79 (8%) Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 +I+ PK +L F N + G IP + T P + Sbjct: 119 EIKNQQPKAILACEEVE---LFLNQNLRIQIVRG----FELNFKGIPIVFTYLPTSQVTN 171 Query: 241 PLIKKNTWHALITLKKALK 259 P +KK W L +K +K Sbjct: 172 PELKKEIWQDLKIIKGIIK 190 >gi|322391531|ref|ZP_08065000.1| uracil DNA glycosylase [Streptococcus peroris ATCC 700780] gi|321145614|gb|EFX41006.1| uracil DNA glycosylase [Streptococcus peroris ATCC 700780] Length = 205 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 54/167 (32%), Gaps = 17/167 (10%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159 + + IIG P +G + K+G+ L + L + + + + Sbjct: 41 PKTARINIIGQAPGLKTQEAGLYWKDKSGDRLREWLGVDEDTFYNSGYFAVMPMDFYFPG 100 Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL-GKWSN 218 + +L + EL ++ L IG + ++ + + ++ + Sbjct: 101 HGKSGDLPPRPGFAEKWHPELLKELPDIQLTLLIGQYAQAYYLHEKVSGKVTDRVHRFKD 160 Query: 219 LCTPHSIIPTLATVHPQELIQYPLI-KKNTW---HALITLKKALKNL 261 + VHP + + KKN W L LK + + Sbjct: 161 YLPDY-----FPLVHPSP--RNQIWMKKNPWFEEEVLPDLKDRIHKI 200 >gi|118602465|ref|YP_903680.1| hypothetical protein Rmag_0450 [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567404|gb|ABL02209.1| hypothetical protein Rmag_0450 [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 139 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 11/31 (35%), Positives = 17/31 (54%) Query: 229 LATVHPQELIQYPLIKKNTWHALITLKKALK 259 T HP E++ +K+ TW L +K+ LK Sbjct: 109 FVTHHPSEVLTNEQLKRETWEVLKRVKQYLK 139 >gi|332366797|gb|EGJ44538.1| uracil DNA glycosylase [Streptococcus sanguinis SK1059] Length = 194 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 23/197 (11%), Positives = 60/197 (30%), Gaps = 22/197 (11%) Query: 76 SLHEL-KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 +L ++ K+++ + + + A + + I+G P +G + K+G+ Sbjct: 3 TLEDITKAIMADPENQEFTKQGIKPLFAA-PKNARINIVGQAPGLKTQEAGLYWKDKSGD 61 Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP------- 187 L + L E + P + + ++ + + P Sbjct: 62 RLREWLDVDEDTFYNSGYFAVLPMDFYFPGHGKSGDLPPRKDFADK---WHQPILELLPD 118 Query: 188 -KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYP 241 ++ + IG + ++ + + P VHP + + P Sbjct: 119 IELTILIGQYAQKYYLHQKGNIKLTETVQHYQDYLPD----FFPLVHPSPRNQIWMAKNP 174 Query: 242 LIKKNTWHALITLKKAL 258 + L L + + Sbjct: 175 WFAEQVVPDLQALVQKI 191 >gi|251781919|ref|YP_002996221.1| uracil DNA glycosylase superfamily protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390548|dbj|BAH81007.1| uracil DNA glycosylase superfamily protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|323126735|gb|ADX24032.1| hypothetical protein SDE12394_02470 [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 191 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 53/161 (32%), Gaps = 14/161 (8%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + ++I+G P + ++ ++G L L + + I P Sbjct: 29 PKTARIIIVGQAPGIVAQETKLYWNDRSGIRLRDWLGVDNDTFYRSGLFGIIPMDFYYPG 88 Query: 165 NLSNIEMEICRPI---IMRQIELISPKI--LLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + ++ + + P++ + +G ++F+ N A KT + Sbjct: 89 KGKSGDLPPRNGFAAKWHPPLRELMPEVELTILVGRYAQDFYLGNKAYKTLTETVRHFAD 148 Query: 220 CTPHSIIPTLATVHPQELIQYPLI-KKNTW--HALITLKKA 257 P VHP + L KN+W L+ + + Sbjct: 149 YLPDY----FPLVHPSP--RNQLWLAKNSWFEQDLLPILQK 183 >gi|46201865|ref|ZP_00208281.1| COG1573: Uracil-DNA glycosylase [Magnetospirillum magnetotacticum MS-1] Length = 141 Score = 44.4 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 37/125 (29%), Gaps = 28/125 (22%) Query: 85 RSFHDCHL-----CSTSLS-------TICATQTEGQDLMIIGYTPS-DSDNISGKPFSGK 131 C + + + L+++G P N +G+PF+G Sbjct: 8 ADCGLCPRLAAFRRANRAQYPGWHHDPVPSFGGLDSRLLVVGLAPGLKGANRTGRPFTGD 67 Query: 132 T-GNMLDKMLQSIEIMRTQ-------------IHISMISPWHPPGNRNLSNIEMEICRPI 177 G++L L + R I+ + PP E CRP Sbjct: 68 YAGDLLYSSLLHFGLARGDYRQAADDGLELVGCRITNAARCVPP-ANKPLPAEFAACRPF 126 Query: 178 IMRQI 182 + +I Sbjct: 127 LAAEI 131 >gi|322389708|ref|ZP_08063255.1| uracil DNA glycosylase [Streptococcus parasanguinis ATCC 903] gi|321143547|gb|EFX38978.1| uracil DNA glycosylase [Streptococcus parasanguinis ATCC 903] Length = 194 Score = 44.0 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 53/168 (31%), Gaps = 22/168 (13%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + IIG P +G + K+G+ L + L E + + P Sbjct: 32 PKTARINIIGQAPGMKTEEAGIYWKDKSGDRLREWLGVDEDTFYNSGLFAVIPMDFYFPG 91 Query: 165 NLSNIEMEICRPI---IMRQIELISP--KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + ++ + Q+ P ++ L IG + ++ + GK + Sbjct: 92 HGKSGDLPPRKGFAEKWHPQLLKECPDIELTLLIGQYAQAYYLHEKVS------GKVTER 145 Query: 220 CTPHSIIPTLATV----HPQ-----ELIQYPLIKKNTWHALITLKKAL 258 L T HP + + P + L TL + + Sbjct: 146 VHHFKDY--LPTYFPLVHPSPRNQIWMAKNPWFEAEVVAELQTLVQEI 191 >gi|228477404|ref|ZP_04062040.1| uracil-DNA glycosylase [Streptococcus salivarius SK126] gi|228250839|gb|EEK10027.1| uracil-DNA glycosylase [Streptococcus salivarius SK126] Length = 194 Score = 44.0 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 25/199 (12%), Positives = 56/199 (28%), Gaps = 32/199 (16%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQ--------DLMIIGYTPSDSDNISGK 126 +L EL + S + Q + I+G P SG Sbjct: 2 ETLEELTQAIMS--------DEQNKAFTEQGIKPLFTIPKTARINIVGQAPGIRAQESGL 53 Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISP--WHPPGNRNL---SNIEMEICRPIIMRQ 181 ++ +G+ L + + + I P ++ PG+ + + Sbjct: 54 YWNDPSGDNLRDWMGVSREEFYESGMFAIVPMDFYFPGHGKSGDLPPRKGFADKWHEKVL 113 Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQ----- 235 ++ + +GN + ++ + + + + + VHP Sbjct: 114 ALAPDIQLTILVGNYAQRYYLHQKSSAKLTDTVKHYKDYLPEF-----FPLVHPSPRNNI 168 Query: 236 ELIQYPLIKKNTWHALITL 254 + P + L TL Sbjct: 169 WQAKNPWFMEEVVPDLKTL 187 >gi|157151546|ref|YP_001450136.1| uracil-DNA glycosylase [Streptococcus gordonii str. Challis substr. CH1] gi|157076340|gb|ABV11023.1| uracil-DNA glycosylase [Streptococcus gordonii str. Challis substr. CH1] Length = 194 Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 23/165 (13%), Positives = 51/165 (30%), Gaps = 16/165 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + IIG P +G + K+G+ L + L E + + P Sbjct: 32 PKTARINIIGQAPGMKTEAAGLYWKDKSGDRLREWLGVDEDTFYNSGLFAVIPMDFYFPG 91 Query: 165 NLSNIEMEICRPI---IMRQIELISP--KILLFIGNKTKNFFFNNDAQKTYQNL-GKWSN 218 + + ++ + Q+ P ++ L IG + ++ + + N Sbjct: 92 HGKSGDLPPRKGFAEKWHPQLLKECPDIELTLLIGQYAQAYYLHEKVSGKVTERVHHFKN 151 Query: 219 LCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258 + VHP + + P + L L + + Sbjct: 152 YLPEY-----FPLVHPSPRNQIWMAKNPWFEAEVVPELQALVQKI 191 >gi|322377832|ref|ZP_08052321.1| uracil DNA glycosylase family protein [Streptococcus sp. M334] gi|321281255|gb|EFX58266.1| uracil DNA glycosylase family protein [Streptococcus sp. M334] Length = 192 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 46/165 (27%), Gaps = 15/165 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159 + + IIG P +G + K+G+ L L + + + + Sbjct: 32 PKTARINIIGQAPGLKTQEAGLYWKDKSGDRLRDWLGVDEDTFYNSGYFAVLPMDFYFPG 91 Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + +L + EL ++ L IG + ++ K Sbjct: 92 HGKSGDLPPRAGFAEKWHPQLLQELPDIQLTLLIGQYAQAYYLQEKVSGKVTERVKHYQN 151 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKAL 258 P VHP + + P + L +K L Sbjct: 152 YLPAY----FPLVHPSPRNQIWMAKNPWFESEVVPDLKKRIKTIL 192 >gi|222152664|ref|YP_002561839.1| uracil DNA glycosylase superfamily protein [Streptococcus uberis 0140J] gi|222113475|emb|CAR41203.1| uracil DNA glycosylase superfamily protein [Streptococcus uberis 0140J] Length = 191 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 23/167 (13%), Positives = 56/167 (33%), Gaps = 15/167 (8%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPP 161 + ++I+G P + ++ ++G L + L I + ++P Sbjct: 29 PKTAKIVIVGQAPGIIAQETKLFWNDRSGLKLREWLGVDNDTFYYSGHFAILPMDFYYPG 88 Query: 162 GNR--NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + +L + + L ++++ +G +N++ +K K Sbjct: 89 KGKSGDLPPRKNFAPKWHKRLLDRLEEVELIILVGQYAQNYYLGERQKKNLTETVKAFQD 148 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHAL-ITLKKALKN 260 P VHP L + P ++ L ++K L++ Sbjct: 149 YLPTY----FPLVHPSPRNQIWLKRNPWFEEEVVPQLQKKVQKILRS 191 >gi|307706149|ref|ZP_07642968.1| uracil DNA glycosylase superfamily protein [Streptococcus mitis SK321] gi|307618549|gb|EFN97697.1| uracil DNA glycosylase superfamily protein [Streptococcus mitis SK321] Length = 196 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 47/167 (28%), Gaps = 15/167 (8%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159 + + IIG P +G + K+G+ L L + I + + + Sbjct: 32 PKTARINIIGQAPGLKTQEAGLYWKDKSGDRLRAWLGVDEDIFYNSGYFAVLPMDFYFPG 91 Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + +L + EL ++ L IG + ++ K Sbjct: 92 HGKSGDLPPRTGFAEKWHPQLLQELPDIQLTLLIGQYAQAYYLKEKISGKVTERVKHYQN 151 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKALKN 260 P VHP + + P + L +K L Sbjct: 152 YLPTY----FPLVHPSPRNQIWMAKNPWFESEVVPDLKKRIKTILGE 194 >gi|217977513|ref|YP_002361660.1| hypothetical protein Msil_1333 [Methylocella silvestris BL2] gi|217502889|gb|ACK50298.1| conserved hypothetical protein [Methylocella silvestris BL2] Length = 183 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 52/171 (30%), Gaps = 20/171 (11%) Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGN 163 L+I P + SG PF+ +G+ L + + ++I I+ + P Sbjct: 15 SARLLIASQAPGIRVHQSGLPFNDASGDRLRLWMNVSRDAFYDESRIAIAPMGFCFPGHG 74 Query: 164 RNL---SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN------NDAQKTYQNLG 214 + +L IG +++ F + + + Sbjct: 75 PARSDLPPRPECRALWHDELFAAMGQVDCVLAIGRYAQDYHFARLGRPLPKGARLDEIVR 134 Query: 215 KWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTWHA---LITLKKALKNL 261 +W I L HP + K+N W L L++ + L Sbjct: 135 RWREFAGSAPKIIALP--HPSW--RNSGWLKRNPWFDAEVLPALREEVARL 181 >gi|324994557|gb|EGC26470.1| uracil DNA glycosylase [Streptococcus sanguinis SK678] gi|327462548|gb|EGF08872.1| uracil DNA glycosylase [Streptococcus sanguinis SK1] gi|327474406|gb|EGF19812.1| uracil DNA glycosylase [Streptococcus sanguinis SK408] gi|327489789|gb|EGF21579.1| uracil DNA glycosylase [Streptococcus sanguinis SK1058] Length = 193 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 20/167 (11%), Positives = 48/167 (28%), Gaps = 20/167 (11%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + I+G P +G + K+G+ L + L E + P Sbjct: 32 PKNARINIVGQAPGLKTQQAGLYWKDKSGDRLREWLGVDEETFYHSGYFAVLPMDFYFPG 91 Query: 165 NLSNIEMEICRPIIMRQIELISP--------KILLFIGNKTKNFFFNNDAQKTYQNLGKW 216 + + ++ + + P ++ + IG + ++ + + Sbjct: 92 HGKSGDLPPRKDFADK---WHQPILELLPDIELTILIGQYAQKYYLHQKGNIKLTETVQH 148 Query: 217 SNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258 P VHP + + P + L L + + Sbjct: 149 YQDYLPD----FFPLVHPSPRNQIWMAKNPWFAEQVVPDLQALVQKI 191 >gi|225870935|ref|YP_002746882.1| uracil DNA glycosylase superfamily protein [Streptococcus equi subsp. equi 4047] gi|225700339|emb|CAW94647.1| uracil DNA glycosylase superfamily protein [Streptococcus equi subsp. equi 4047] Length = 191 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 20/166 (12%), Positives = 54/166 (32%), Gaps = 15/166 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + ++I+G P + ++ ++G L L + Q + + P Sbjct: 29 PQTARIVIVGQAPGIVAQETRLYWNDRSGVRLRAWLGVDDRTFYQSGLFGVLPMDFYYPG 88 Query: 165 NLSNIEMEICRPIIMR-----QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + ++ + + + ++++ +G + ++ ++ + Sbjct: 89 KGKSGDLPPRKGFAAKWHGPLMALMPQVELVVLVGQYAQQYYLGEGCRRNLTETVQHFED 148 Query: 220 CTPHSIIPTLATVHPQELIQYPLI-KKNTW--HALI-TLKKALKNL 261 P VHP + L KN W L+ LK ++ + Sbjct: 149 YLPDY----FPLVHPSP--RNQLWLAKNAWFEEELVPVLKDKVRQI 188 >gi|119952819|ref|YP_945028.1| hypothetical protein BT0013 [Borrelia turicatae 91E135] gi|119861590|gb|AAX17358.1| hypothetical protein BT0013 [Borrelia turicatae 91E135] Length = 192 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 26/79 (32%), Gaps = 7/79 (8%) Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240 +I PK +L F N + G IP + T P + Sbjct: 119 EINNQQPKAILACEEVA---LFLNQHLRIQIVRG----FELNFKGIPIVFTYLPTNQVTN 171 Query: 241 PLIKKNTWHALITLKKALK 259 P IKK W L +K +K Sbjct: 172 PEIKKEIWQDLKIIKGIIK 190 >gi|149922039|ref|ZP_01910480.1| hypothetical protein PPSIR1_24229 [Plesiocystis pacifica SIR-1] gi|149817091|gb|EDM76572.1| hypothetical protein PPSIR1_24229 [Plesiocystis pacifica SIR-1] Length = 194 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 53/203 (26%), Gaps = 31/203 (15%) Query: 77 LHELKSLLRSFHDCHLCST---SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 + E LL C LC I ++I G P + G PF +G Sbjct: 1 MSEPSKLLAEIRRCTLCEGLPLGPRPIV-QLDARARILIAGQAPGRLTHAKGVPFDDPSG 59 Query: 134 NMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI- 189 L L ++ ++ + + P ++ C + P + Sbjct: 60 ERLRDWLGVDRATFYDASKFAVVPMGFCFPGSGKSGDLPPRPECAERWREPVLEALPAVA 119 Query: 190 -LLFIGNKTKNFFFNNDAQKT-----YQNLGKWSNLCTPHSIIPTLATVHPQ-----ELI 238 L +G + + + T +W L HP Sbjct: 120 LTLVLGRHAMAWHLGLERRATLTSVVEGWRARWPEH---------LPLPHPSPRNRRWFA 170 Query: 239 QYPLIKKNTWHALITLKKALKNL 261 P + L L+ + L Sbjct: 171 NNPWFEAEV---LPVLRGRVAEL 190 >gi|256845525|ref|ZP_05550983.1| uracil-DNA glycosylase [Fusobacterium sp. 3_1_36A2] gi|256719084|gb|EEU32639.1| uracil-DNA glycosylase [Fusobacterium sp. 3_1_36A2] Length = 197 Score = 44.0 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 20/168 (11%), Positives = 46/168 (27%), Gaps = 18/168 (10%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 E ++I+G P + + K+G+ L E ++ I P Sbjct: 35 PEKARIVIVGQAPGLKAQENRLYWKDKSGDKLRIWTGIDEKTFYSSNLLAIIPMDFYYPG 94 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + L + ++ + IG + F+ + ++ Sbjct: 95 KGKSGDLPPRKDFGDKWHNKILELLPNVELFILIGKYAQGFYLKGKLKD------NLTDT 148 Query: 220 CTPHSII--PTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKN 260 + VHP L + P ++ L + + Sbjct: 149 VKAYKEYLPKFFPIVHPSPLNIGWLKKNPWFEEEVVPTLKEMVTKIME 196 >gi|212695914|ref|ZP_03304042.1| hypothetical protein ANHYDRO_00447 [Anaerococcus hydrogenalis DSM 7454] gi|212677037|gb|EEB36644.1| hypothetical protein ANHYDRO_00447 [Anaerococcus hydrogenalis DSM 7454] Length = 190 Score = 44.0 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 54/171 (31%), Gaps = 21/171 (12%) Query: 79 ELKSLLRSFHDCHLCSTSLSTICATQ-----TEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 +++ ++ T + ++ IG P SG F+ K+G Sbjct: 2 QIEKIIEKLKADPRNKTYTKR--GIGPIFQFNKNAKILTIGQAPGKKVEESGILFNDKSG 59 Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE------LISP 187 L L I + I P + + + R I ++ L + Sbjct: 60 ENLVDWL-GISMDTLHGENFSIIPMDFYYPGKAKSGD-KAPRKFIAKEYHPLLLEGLKNI 117 Query: 188 KILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQEL 237 + + IG + F+ +D +K + + + + + VHP L Sbjct: 118 NLTILIGAYAQKFYLKDDFKKNLTETVRNFKDYLPEY-----FPLVHPSPL 163 >gi|324991057|gb|EGC22991.1| uracil DNA glycosylase [Streptococcus sanguinis SK353] Length = 194 Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 24/194 (12%), Positives = 60/194 (30%), Gaps = 16/194 (8%) Query: 76 SLHEL-KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 +L ++ K+++ + + + A + + I+G P +G + K+G+ Sbjct: 3 TLEDITKAIMADPENQEFTKQGIKPLFAA-PKNARINIVGQAPGLKTQEAGLYWKDKSGD 61 Query: 135 MLDKML--QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ---IELISPKI 189 L L + + ++ PG+ ++ Q L ++ Sbjct: 62 RLRTWLGVDEDTFYNSGYFAVLPMDFYFPGHGKSGDLPPRKDFADKWHQPILELLPDIEL 121 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIK 244 + IG + ++ + + P VHP + + P Sbjct: 122 TILIGQYAQKYYLHQKGNIKLTETVQHYQDYLPD----FFPLVHPSPRNQIWMAKNPWFA 177 Query: 245 KNTWHALITLKKAL 258 + L L + + Sbjct: 178 EQVVPDLQALVQKI 191 >gi|300711343|ref|YP_003737157.1| hypothetical protein HacjB3_09910 [Halalkalicoccus jeotgali B3] gi|299125026|gb|ADJ15365.1| hypothetical protein HacjB3_09910 [Halalkalicoccus jeotgali B3] Length = 218 Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 17/156 (10%), Positives = 40/156 (25%), Gaps = 14/156 (8%) Query: 89 DCHL-CSTSLSTICATQTEGQDLMIIGYTPSDS-DNISGKPFS-GKTGNMLDKMLQSIEI 145 C CS + + D +IG P+ + PF+ G + + L Sbjct: 17 ACETACSAGVEAVFGYGDANADFHVIGDHPAIHGGANTAVPFTQTPAGEAIQRALFETGF 76 Query: 146 ----MRTQIHISMISPWHPPGNRNLS----NIEMEICRPIIMRQIELISPKILLFIGNKT 197 + H+S + ++ I+ +L+ +G + Sbjct: 77 AGEPYSDEPHLSNCFLSYLHMCCPPDGDPTAESYANMERFFDAELRAIAAHVLVSVGERA 136 Query: 198 KNFFFNNDAQKTYQN---LGKWSNLCTPHSIIPTLA 230 + + + + S + Sbjct: 137 TEHVIDQYTARNGRIELDMATLHATEIRGSGFLVVP 172 >gi|304312381|ref|YP_003811979.1| Uracil-DNA glycosylase family protein [gamma proteobacterium HdN1] gi|301798114|emb|CBL46336.1| Uracil-DNA glycosylase family protein [gamma proteobacterium HdN1] Length = 192 Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 54/154 (35%), Gaps = 18/154 (11%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ---SIEIMRTQIHISMISPWHP- 160 ++I P + +G PF+ +G L + L I +I I + +P Sbjct: 25 HPDARILIASQAPGRKVHETGIPFNDPSGVRLREWLGISPEIFYDPHKIAIIPMGFCYPG 84 Query: 161 ---PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS 217 G+ + R ++ ++ + ++ + IG + + ++ ++ + Sbjct: 85 RGRSGDLPPRPECAPLWRARLLSHLK--NLELTIAIGKYAIAYHLPDQRKRPLTDVVRDW 142 Query: 218 NLCTPHSIIPTLATVHPQ-----ELIQYPLIKKN 246 PH T+A HP L + P + Sbjct: 143 QAHWPH----TIAIPHPSPRNNIWLKRNPWFEAE 172 >gi|309799861|ref|ZP_07694067.1| uracil DNA glycosylase superfamily [Streptococcus infantis SK1302] gi|308116508|gb|EFO53978.1| uracil DNA glycosylase superfamily [Streptococcus infantis SK1302] Length = 201 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 48/161 (29%), Gaps = 18/161 (11%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159 + + IIG P +G + K+G+ L + L + + + + Sbjct: 42 PKTARINIIGQAPGLKTQEAGLYWKDKSGDRLREWLGVDEDTFYNSGYFAVMPMDFYFPG 101 Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + +L + EL ++ L IG + ++ + GK ++ Sbjct: 102 HGKSGDLPPRPGFAEKWHPKLLKELPDIQLTLLIGQYAQAYYL------YEKVSGKVTDR 155 Query: 220 CTPHSII--PTLATVHPQ-----ELIQYPLIKKNTWHALIT 253 VHP + + P ++ L Sbjct: 156 VHRFKDYLPDYFPLVHPSPRNQIWMKKNPWFEEEVVPDLKK 196 >gi|330721642|gb|EGG99656.1| hypothetical protein imdm_849 [gamma proteobacterium IMCC2047] Length = 244 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 31/233 (13%), Positives = 67/233 (28%), Gaps = 36/233 (15%) Query: 29 DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFH 88 ++P ++ + ++ ++ T +++ A ++ Q + E + L S Sbjct: 36 EQPLPSEQVQAVDGVQKPETVLEKATITPPLNAQPEPVAPTVGQTVQTNPEFR--LASI- 92 Query: 89 DCHLCSTSLSTICATQTEGQDLMIIGYTP---SDSDNISGKPFSGKTGNMLDKMLQSIEI 145 M++ P S + + +L ML S+ I Sbjct: 93 ----------IFPGHG------MVVTQVPTTSSADPLDAQQL------KLLGNMLASVGI 130 Query: 146 MRTQIHISMISPW---HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202 + W PG + + + Q +L +G + Sbjct: 131 NQLSKPEVTFFNWPMLRSPGFDQSEKAACQASQAFLNGQKSKYQVSFVLLMGEGAGRYLV 190 Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 + G+ + P L T + +I P +K W L L+ Sbjct: 191 -PQVEGFEGARGQL----ISDASPPLLLTDDLEHVIAEPALKARVWRDLQPLR 238 >gi|326328733|ref|ZP_08195071.1| uracil DNA glycosylase family protein [Nocardioidaceae bacterium Broad-1] gi|325953476|gb|EGD45478.1| uracil DNA glycosylase family protein [Nocardioidaceae bacterium Broad-1] Length = 194 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 48/147 (32%), Gaps = 16/147 (10%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPP 161 +IIG P SG P++ +G L + L + T I + ++P Sbjct: 32 HPEARCLIIGQAPGIRAQQSGIPWNDASGRRLVEWLGVDERTFRDPTAFAILPMDFYYPG 91 Query: 162 GNRNLSNIEMEICRPIIMRQIELISPKI--LLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 PI ++ + P+I L +G+ + + + + T + + + Sbjct: 92 KGATGDLPPRADFAPIWHPRLLELMPQIGLTLLVGDYAQRHYLDGKSSLTERVR-SFRDF 150 Query: 220 CTPHSIIPTLATVHPQEL-----IQYP 241 VHP L + P Sbjct: 151 LPDR-----FPLVHPSPLNFRWQSRNP 172 >gi|325694647|gb|EGD36555.1| uracil DNA glycosylase [Streptococcus sanguinis SK150] Length = 194 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 24/194 (12%), Positives = 61/194 (31%), Gaps = 16/194 (8%) Query: 76 SLHEL-KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 +L ++ K+++ + + + A + + I+G P +G + K+G+ Sbjct: 3 TLDDITKAIMADPENEEFTEKGIKPLFAA-PKNARINIVGQAPGLKTQEAGLYWKDKSGD 61 Query: 135 MLDKML--QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ---IELISPKI 189 L + L + + ++ PG+ ++ Q L ++ Sbjct: 62 RLREWLGVDEDTFYNSGYFAVLPMDFYFPGHGKSGDLPPRKDFADKWHQPILELLPDIEL 121 Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIK 244 + IG + ++ + + P VHP + + P Sbjct: 122 TILIGQYAQKYYLHQKGNIKLTETVQHYQDYLPD----FFPLVHPSPRNQIWMAKNPWFA 177 Query: 245 KNTWHALITLKKAL 258 + L L + + Sbjct: 178 EQVVPDLQALVQKI 191 >gi|225868112|ref|YP_002744060.1| uracil DNA glycosylase superfamily protein [Streptococcus equi subsp. zooepidemicus] gi|225701388|emb|CAW98460.1| uracil DNA glycosylase superfamily protein [Streptococcus equi subsp. zooepidemicus] Length = 191 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 17/150 (11%), Positives = 47/150 (31%), Gaps = 12/150 (8%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + ++I+G P + ++ ++G L L + Q + + P Sbjct: 29 PQTARIVIVGQAPGIVAQETRLYWNDRSGVRLRAWLGVDDRTFYQSGLFGVLPMDFYYPG 88 Query: 165 NLSNIEMEICRPIIMR-----QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + ++ + + + ++++ +G + ++ ++ + Sbjct: 89 KGKSGDLPPRKGFAAKWHGPLMALMPQVELVVLVGQYAQQYYLGKGCRRNLTETVQHFED 148 Query: 220 CTPHSIIPTLATVHPQELIQYPLI-KKNTW 248 P VHP + L KN W Sbjct: 149 YLPDY----FPLVHPSP--RNQLWLAKNAW 172 >gi|154247254|ref|YP_001418212.1| hypothetical protein Xaut_3326 [Xanthobacter autotrophicus Py2] gi|154161339|gb|ABS68555.1| conserved hypothetical protein [Xanthobacter autotrophicus Py2] Length = 225 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 27/209 (12%), Positives = 60/209 (28%), Gaps = 36/209 (17%) Query: 73 KACSLHELKSLLRSFHDC-------HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISG 125 +L L + +R+ C L + +++ P + SG Sbjct: 7 SDPALDALVARIRACRVCVEAPRGAPL-PHEPRPVLWVSDTAA-ILVASQAPGTKVHASG 64 Query: 126 KPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPII 178 +PF+ +G+ L + + ++I I+ + P G E Sbjct: 65 RPFTDASGDRLRQWMGVSDDEFYDASRIAIAPMGFCFPGQDAAGGDLPPRRECAATWHDT 124 Query: 179 MRQIELISPKILLFIGNKTKNFFF------NNDAQKTYQNLGKWSNLCTPH----SIIPT 228 + L + +++L +G + + + Q + W + + Sbjct: 125 LF-ATLPAFRLILAVGRPAQAYHLARLGLRAHLKASLTQTVHHWREVRAAGMALAHPVAV 183 Query: 229 LATVHPQ-----ELIQYPLIKKNTWHALI 252 HP L + P L+ Sbjct: 184 YTLPHPSWRNTGWLKRNP----FFEADLL 208 >gi|294790772|ref|ZP_06755930.1| uracil DNA glycosylase family protein [Scardovia inopinata F0304] gi|294458669|gb|EFG27022.1| uracil DNA glycosylase family protein [Scardovia inopinata F0304] Length = 235 Score = 43.6 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 24/182 (13%), Positives = 62/182 (34%), Gaps = 34/182 (18%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPW--- 158 + +++IG P + S P++ ++G+ L + + ++ +I I + + Sbjct: 54 HQQARIVLIGQAPGRAAQDSMIPWNDRSGDRLRQWMGIDKNTFYQSDRIAIMNMDFYYPG 113 Query: 159 ---------------HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 + +L + + ++ + K++L IG + Sbjct: 114 SKGDRRCADGAGKKPRKGPSSDLPPRSGFAEKWHPLLLEQMPNVKLILLIGFYAVRKYLG 173 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPT-LATVHPQELIQYPLIK-KNTW---HALITLKKAL 258 + + +++ + P VHP + + KN W L LK+ + Sbjct: 174 LRPKD------RLTDVVKDYQGNPLYFPLVHPSP--RNQIWMTKNPWFAGETLPLLKRRV 225 Query: 259 KN 260 + Sbjct: 226 RQ 227 >gi|237744206|ref|ZP_04574687.1| uracil-DNA glycosylase [Fusobacterium sp. 7_1] gi|229431435|gb|EEO41647.1| uracil-DNA glycosylase [Fusobacterium sp. 7_1] Length = 197 Score = 43.6 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 19/167 (11%), Positives = 45/167 (26%), Gaps = 16/167 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + ++I+G P + + K+G+ L + E ++ I P Sbjct: 35 PKEARIVIVGQAPGIKAQENRLYWKDKSGDKLRLWMGVDEKTFYSSNLLAIIPMDFYYPG 94 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSN 218 + + L + ++ + IG + F+ + + Sbjct: 95 KGKSGDLPPRKDFGEKWHNKILELLPNVELFILIGKYAQGFYLKGKLKDNLTNTVHAYKE 154 Query: 219 LCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKN 260 VHP L + P ++ L + + Sbjct: 155 YLP-----KFFPIVHPSPLNIRWLKKNPWFEEEVVPKLKEMVTKIME 196 >gi|218507487|ref|ZP_03505365.1| DNA-directed DNA polymerase protein [Rhizobium etli Brasil 5] Length = 74 Score = 43.6 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 10/74 (13%), Positives = 21/74 (28%), Gaps = 10/74 (13%) Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ------YPLI 243 ++ +G + T + G P L T+HP L++ Sbjct: 2 VVALGATALYALLGPKVKLTPE-RGHILQPTNRP---PVLVTIHPSYLLRIRDEAERHRQ 57 Query: 244 KKNTWHALITLKKA 257 ++ L + Sbjct: 58 RRQFVSDLHKAAEF 71 >gi|325695867|gb|EGD37758.1| uracil DNA glycosylase [Streptococcus sanguinis SK160] Length = 194 Score = 43.2 bits (100), Expect = 0.032, Method: Composition-based stats. Identities = 21/167 (12%), Positives = 48/167 (28%), Gaps = 20/167 (11%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + I+G P +G + K+G+ L + L E + P Sbjct: 32 PKNARINIVGQAPGLKTQQAGLYWKDKSGDRLREWLGVDEETFYHSGYFAVLPMDFYFPG 91 Query: 165 NLSNIEMEICRPIIMRQIELISP--------KILLFIGNKTKNFFFNNDAQKTYQNLGKW 216 + + ++ + R P ++ + IG + ++ + + Sbjct: 92 HGKSGDLPPRKGFAER---WHQPILELLPDIELTILIGQYAQKYYLHQKGNIKLTETVQH 148 Query: 217 SNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258 P VHP + + P + L L + + Sbjct: 149 YQDYLPD----FFPLVHPSPRNQIWMAKNPWFEAEVVPELQALVQKI 191 >gi|256027678|ref|ZP_05441512.1| Uracil-DNA glycosylase [Fusobacterium sp. D11] gi|289765637|ref|ZP_06525015.1| uracil-DNA glycosylase [Fusobacterium sp. D11] gi|289717192|gb|EFD81204.1| uracil-DNA glycosylase [Fusobacterium sp. D11] Length = 197 Score = 43.2 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 19/168 (11%), Positives = 47/168 (27%), Gaps = 18/168 (10%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + ++I+G P + + K+G+ L + E ++ I P Sbjct: 35 PKEARIVIVGQAPGIKAQENRLYWKDKSGDKLRLWMGVDEKTFYSSNLLAIIPMDFYYPG 94 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + L + ++ + IG + F+ + ++ Sbjct: 95 KGKSGDLPPRKDFGEKWHNKILELLPNVELFILIGKYAQGFYLKGKLKD------NLTDT 148 Query: 220 CTPHSII--PTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKN 260 + VHP L + P ++ L + + Sbjct: 149 VHAYKEYLPKFFPIVHPSPLNIRWLKKNPWFEEEVVPKLKEMVTKIME 196 >gi|78047880|ref|YP_364055.1| hypothetical protein XCV2324 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036310|emb|CAJ24001.1| conserved hypothetical protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 185 Score = 43.2 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 36/113 (31%), Gaps = 5/113 (4%) Query: 52 PITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLC-STSLSTICATQTEGQDL 110 P R + P + +L + +R+ C + + + Sbjct: 3 PGYASRRMAPPSCASHPFRKRAMPTLDAFLTDVRACTRCAPHLPHGVQPVF-QFHPSAPI 61 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHP 160 +I G P + SG PF +G L L + T+I I + +P Sbjct: 62 LIAGQAPGARVHASGVPFDDASGARLRAWLGVDRDTFYDPTRIAILPMGFCYP 114 >gi|203283943|ref|YP_002221683.1| hypothetical protein BDU_19 [Borrelia duttonii Ly] gi|203287486|ref|YP_002222501.1| hypothetical protein BRE_18 [Borrelia recurrentis A1] gi|201083386|gb|ACH92977.1| uncharacterized conserved protein [Borrelia duttonii Ly] gi|201084706|gb|ACH94280.1| uncharacterized conserved protein [Borrelia recurrentis A1] Length = 189 Score = 43.2 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 34/103 (33%), Gaps = 7/103 (6%) Query: 153 SMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN 212 + + ++ N ++ ++ +I+ PK +L F N + Sbjct: 88 TNAIIKKWCESISILNYKIINNSNTLIAEIDNQQPKAILACEEVE---LFLNQNLRIQIV 144 Query: 213 LGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255 G IP + T P I P +KK W L +K Sbjct: 145 RG----FELKFKKIPIVFTHLPTSQISNPELKKEIWQDLKMIK 183 >gi|255327009|ref|ZP_05368085.1| uracil-DNA glycosylase [Rothia mucilaginosa ATCC 25296] gi|255296226|gb|EET75567.1| uracil-DNA glycosylase [Rothia mucilaginosa ATCC 25296] Length = 215 Score = 43.2 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 18/140 (12%), Positives = 46/140 (32%), Gaps = 9/140 (6%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + +++IG P + S P++ +G L + + + + + P Sbjct: 48 SPHARIVVIGQAPGRAAQESRIPWNDPSGVKLREWMGVTDEQFYNPDLISLLPMDFYYPG 107 Query: 165 NLSNIEMEICRPI---IMRQIELISP--KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 ++ + + Q+ + P +++L +G ++ + D + + Sbjct: 108 KGAHGDNPPRKDFAPKWHPQLLELMPNVQLILLVGAYSQKHYL--DGMHAPKAQKNLTET 165 Query: 220 CTPHSII--PTLATVHPQEL 237 L VHP L Sbjct: 166 VRAWESYLPKFLPLVHPSPL 185 >gi|289168409|ref|YP_003446678.1| uracil-DNA glycosylase [Streptococcus mitis B6] gi|288907976|emb|CBJ22816.1| uracil-DNA glycosylase [Streptococcus mitis B6] Length = 192 Score = 43.2 bits (100), Expect = 0.041, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 46/165 (27%), Gaps = 15/165 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPP 161 + + IIG P +G + K+G+ L L + + + + P Sbjct: 32 PKTARINIIGQAPGLKTQEAGLYWKDKSGDRLRDWLGVDEDTFYNSGYFAVLPMDFYFPG 91 Query: 162 GNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 ++ Q+ P ++ L IG + ++ K Sbjct: 92 HGKSGDLPPRADFAEKWHPQLLKELPDIQLTLLIGQYAQAYYLQEKVSGKVTERVKHYQN 151 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKAL 258 P VHP + + P + L +K L Sbjct: 152 YLPTY----FPLVHPSPRNQIWMAKNPWFESEVVPDLKKRIKTIL 192 >gi|283457723|ref|YP_003362310.1| uracil-DNA glycosylase [Rothia mucilaginosa DY-18] gi|283133725|dbj|BAI64490.1| uracil-DNA glycosylase [Rothia mucilaginosa DY-18] Length = 233 Score = 43.2 bits (100), Expect = 0.041, Method: Composition-based stats. Identities = 18/140 (12%), Positives = 46/140 (32%), Gaps = 9/140 (6%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + +++IG P + S P++ +G L + + + + + P Sbjct: 66 SPHARIVVIGQAPGRAAQESRIPWNDPSGVKLREWMGVTDEQFYDPDLISLLPMDFYYPG 125 Query: 165 NLSNIEMEICRPI---IMRQIELISP--KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 ++ + + Q+ + P +++L +G ++ + D + + Sbjct: 126 KGAHGDNPPRKDFAPKWHPQLLELMPDVQLILLVGAYSQKHYL--DGVHAPKAQKNLTET 183 Query: 220 CTPHSII--PTLATVHPQEL 237 L VHP L Sbjct: 184 VRAWESYLPKFLPLVHPSPL 203 >gi|306829087|ref|ZP_07462277.1| uracil-DNA glycosylase [Streptococcus mitis ATCC 6249] gi|304428173|gb|EFM31263.1| uracil-DNA glycosylase [Streptococcus mitis ATCC 6249] Length = 194 Score = 42.8 bits (99), Expect = 0.048, Method: Composition-based stats. Identities = 24/167 (14%), Positives = 52/167 (31%), Gaps = 20/167 (11%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159 + + I+G P +G + K+GN L + L + + + + Sbjct: 32 PKTARINIVGQAPGFKTQEAGIYWKDKSGNRLREWLGVDEDTFYNSGYFAVLPMDFYFPG 91 Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS-N 218 + +L + + E + ++ L IG + ++ + K + Sbjct: 92 HGKSGDLPPRKGFAEKWHPQLLKECPNIELTLLIGQYAQAYYLHERISGKVTERVKHYKD 151 Query: 219 LCTPHSIIPTLATVHPQELIQYPLIK-KNTWH------ALITLKKAL 258 + VHP + + KNTW L L + + Sbjct: 152 YLPEY-----FPLVHPSP--RNQIWMAKNTWFESEVVPDLKALVQKI 191 >gi|16330695|ref|NP_441423.1| hypothetical protein sll1217 [Synechocystis sp. PCC 6803] gi|1653187|dbj|BAA18103.1| sll1217 [Synechocystis sp. PCC 6803] Length = 225 Score = 42.8 bits (99), Expect = 0.049, Method: Composition-based stats. Identities = 31/192 (16%), Positives = 58/192 (30%), Gaps = 35/192 (18%) Query: 99 TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR----------- 147 + G L G + G+P G G ++ K R Sbjct: 38 ILFG-GNLGSQLCFFGRDLGADEVRQGQPLIGAAGRLVRKGFFEAWQGRVPRGQDDLQTV 96 Query: 148 -TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS-PKILLFIGNKTKNFFF--- 202 +I ++ P+ PP N+ S E RP + + + K ++ +G + +F Sbjct: 97 CQRILLTNTVPYKPPENKAYSVKVKERFRPFVEQLLVFHWQGKQIITLGTEAFKWFAPYA 156 Query: 203 -----------NNDAQKTYQNLGKWSNLCTPH--SIIPTLATVHPQELIQYPLIKKNTWH 249 + + + L K I+ + HP PL K+ Sbjct: 157 PKGQLDEFFQGGDRYECSLDVLIKAKTAAGKGSQKIVRLMPLPHPS-----PLNKRYYGQ 211 Query: 250 ALITLKKALKNL 261 L++ L + Sbjct: 212 FPTMLQRRLTEI 223 >gi|294786600|ref|ZP_06751854.1| uracil DNA glycosylase family protein [Parascardovia denticolens F0305] gi|315226187|ref|ZP_07867975.1| uracil DNA glycosylase [Parascardovia denticolens DSM 10105] gi|294485433|gb|EFG33067.1| uracil DNA glycosylase family protein [Parascardovia denticolens F0305] gi|315120319|gb|EFT83451.1| uracil DNA glycosylase [Parascardovia denticolens DSM 10105] Length = 196 Score = 42.8 bits (99), Expect = 0.051, Method: Composition-based stats. Identities = 19/167 (11%), Positives = 50/167 (29%), Gaps = 15/167 (8%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML--QSIEIMRTQIHISMISPWHPPG 162 + L+IIG P + + ++ +G+ L + + + M ++ PG Sbjct: 33 NQQARLVIIGQAPGRIAQETRQTWNDHSGDKLREWMGVDRETFYTSPCIAIMPMDFYFPG 92 Query: 163 NRNL---SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + ++ L +G + + + ++ + + Sbjct: 93 AGKSGDLPPRPGFAEKWHPRLLKLMPKIELSLLVGTYAVHAYLHQKNSVKLTDIIRDYDR 152 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKALKN 260 P + HP L + P ++ L ++ L Sbjct: 153 YLPE----FMPLAHPSWHNQLWLKKNPWYQEEVIPLLQERIRGILNE 195 >gi|149378423|ref|ZP_01896118.1| hypothetical protein MDG893_00015 [Marinobacter algicola DG893] gi|149357288|gb|EDM45815.1| hypothetical protein MDG893_00015 [Marinobacter algicola DG893] Length = 129 Score = 42.8 bits (99), Expect = 0.053, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 47/130 (36%), Gaps = 9/130 (6%) Query: 76 SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135 S EL + +R C ++ L+++G P + +G PF+ +G+ Sbjct: 2 SFDELVAHVRRCRICEAHLPLEPRPVVQVSQSARLLVVGQAPGRRVHDTGLPFNDPSGDR 61 Query: 136 LDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIELISPK 188 L + + + Q+ I + +P G+ R +++ ++E + Sbjct: 62 LREWMGVDRDTFYDDQQLAILPMGFCYPGTGKSGDLPPRPECAPAWRDLLLERLEAVQL- 120 Query: 189 ILLFIGNKTK 198 L IG Sbjct: 121 -TLVIGQYAH 129 >gi|329888117|ref|ZP_08266715.1| uracil-DNA glycosylase superfamily protein [Brevundimonas diminuta ATCC 11568] gi|328846673|gb|EGF96235.1| uracil-DNA glycosylase superfamily protein [Brevundimonas diminuta ATCC 11568] Length = 167 Score = 42.4 bits (98), Expect = 0.058, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 47/151 (31%), Gaps = 15/151 (9%) Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPG 162 L+I G P + SG PF+ +G L + ++ ++ ++ + P Sbjct: 6 PETRLLICGQAPGRRVHESGLPFTDPSGVRLRDWMGVDEATFYGDPRLGVAAQAFCFPGT 65 Query: 163 NRNLSNI-EMEICRPIIMRQIELISPKILLFI---GNKTKNFFFNNDAQKTYQNLGKWSN 218 + + C + ++ PK+ L + G + + W + Sbjct: 66 DPKGGDYPPPRRCAELWRPRLLAELPKVELTLLVGGYAQAWALGAAAKANMTETVHAWRD 125 Query: 219 LCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248 L HP + KKN W Sbjct: 126 YAPA-----ILPLPHPSW--RNTAWLKKNPW 149 >gi|145589100|ref|YP_001155697.1| hypothetical protein Pnuc_0917 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047506|gb|ABP34133.1| hypothetical protein Pnuc_0917 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 179 Score = 42.4 bits (98), Expect = 0.059, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 25/76 (32%), Gaps = 2/76 (2%) Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP-HSIIPTLATVHPQELIQYPLIKK 245 P + G + Q L T IP +A+ +++ P K Sbjct: 105 PLVAFAFGGPSTQKITGERDPLP-QLRETVLALNTGTDDDIPVIASFDLTQVVASPKDKA 163 Query: 246 NTWHALITLKKALKNL 261 W L+ K L+N+ Sbjct: 164 FLWQDLLLAKSVLQNI 179 >gi|317496513|ref|ZP_07954862.1| uracil DNA glycosylase superfamily protein [Gemella moribillum M424] gi|316913316|gb|EFV34813.1| uracil DNA glycosylase superfamily protein [Gemella moribillum M424] Length = 156 Score = 42.4 bits (98), Expect = 0.061, Method: Composition-based stats. Identities = 17/133 (12%), Positives = 41/133 (30%), Gaps = 11/133 (8%) Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL---- 166 MIIG P S F+ K+G L + + + + + P Sbjct: 1 MIIGQAPGLKAQESKIFFNDKSGVKLREWMGIDNEIFYNSGLIGVVPMDFYYPGKGKSGD 60 Query: 167 -SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN-DAQKTYQNLGKWSNLCTPHS 224 + R + ++++ +G ++++ + + + + + + Sbjct: 61 LPPRKNFASRWHAKVLELMPDVELIILVGKYAQDYYLKDGKGKNLTETVKNYKKYLPTY- 119 Query: 225 IIPTLATVHPQEL 237 VHP L Sbjct: 120 ----FPIVHPSPL 128 >gi|227508150|ref|ZP_03938199.1| uracil-DNA glycosylase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227192379|gb|EEI72446.1| uracil-DNA glycosylase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 193 Score = 42.4 bits (98), Expect = 0.061, Method: Composition-based stats. Identities = 19/137 (13%), Positives = 44/137 (32%), Gaps = 9/137 (6%) Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPG 162 ++II PS S ++ +G+ L + + +I + + ++P Sbjct: 33 PNAKILIISQAPSRKAQESMVFWNDPSGDRLRDWMGIDKDRFYHSGKIAVMPLDFYYPGK 92 Query: 163 NRNL--SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220 + + + + + ++ L IG + ++ + QK + Sbjct: 93 GIHGDLPPRKGFADKWHQPLLSLMPNVQLKLLIGQYAQKYYLQKNRQKNLTETVRCFEDY 152 Query: 221 TPHSIIPTLATVHPQEL 237 P VHP L Sbjct: 153 LPEY----FPLVHPSPL 165 >gi|322385597|ref|ZP_08059241.1| uracil DNA glycosylase [Streptococcus cristatus ATCC 51100] gi|321270335|gb|EFX53251.1| uracil DNA glycosylase [Streptococcus cristatus ATCC 51100] Length = 208 Score = 42.4 bits (98), Expect = 0.063, Method: Composition-based stats. Identities = 21/167 (12%), Positives = 50/167 (29%), Gaps = 20/167 (11%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + I+G P +G + K+G+ L + L E Q + P Sbjct: 46 PKNARINIVGQAPGLKTQQAGLYWKDKSGDRLREWLGVDEETFYQSGYFAVLPMDFYFPG 105 Query: 165 NLSNIEMEICRPIIMRQIELISP--------KILLFIGNKTKNFFFNNDAQKTYQNLGKW 216 + + ++ + + + P ++ + IG + ++ + + Sbjct: 106 HGKSGDLPPRKGFVEK---WHQPILELLPDIELTILIGQYAQKYYLHQKGNVKLTETVQH 162 Query: 217 SNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258 P VHP + + P + L L + + Sbjct: 163 YQDYLPD----FFPLVHPSPRNQIWMAKNPWFEAEVVPELQALVQKI 205 >gi|169235608|ref|YP_001688808.1| hypothetical protein OE2052F [Halobacterium salinarum R1] gi|167726674|emb|CAP13460.1| conserved hypothetical protein [Halobacterium salinarum R1] Length = 212 Score = 42.4 bits (98), Expect = 0.064, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 38/121 (31%), Gaps = 16/121 (13%) Query: 96 SLSTICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQSIEI-------- 145 S + D+ +IG P +G PF+G G+ L L+ + Sbjct: 18 CESFVPGHGDANADIHVIGDHPGVHGGTDTGTPFTGSAAGDRLRSALRDAGVLTTAADDT 77 Query: 146 ----MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 S + P P G + + P ++ I+ +LL +G + Sbjct: 78 PPIDDPDNSFFSYLHPCVPEGT--PTPADYRELEPFFDAELRAITAHVLLPVGERATTHV 135 Query: 202 F 202 Sbjct: 136 L 136 >gi|168013759|gb|ACA14446.1| hypothetical protein JK011 [Enterobacter cloacae] gi|190683017|gb|ACE81799.1| hypothetical protein JK011 [Enterobacter cloacae] Length = 176 Score = 42.0 bits (97), Expect = 0.074, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 33/105 (31%), Gaps = 5/105 (4%) Query: 60 HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTPS 118 P + +L + +R+ C + + ++I G P Sbjct: 2 APPSCASHPFRKRAMPTLDAFLTDVRACTRCAPHLPHGVQPVF-QFHPSAPILIAGQAPG 60 Query: 119 DSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHP 160 + SG PF +G L L + T+I I + +P Sbjct: 61 ARVHASGVPFDDASGARLRAWLGVDRDTFYDPTRIAILPMGFCYP 105 >gi|254302889|ref|ZP_04970247.1| hypothetical protein FNP_0523 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323081|gb|EDK88331.1| hypothetical protein FNP_0523 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 197 Score = 42.0 bits (97), Expect = 0.074, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 46/152 (30%), Gaps = 16/152 (10%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + ++I+G P + + K+G+ L E ++ I P Sbjct: 35 PKEARIVIVGQAPGIKAQENKLYWKDKSGDKLRVWTGIDEKTFYNSNLLAIIPMDFYYPG 94 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + L + ++ + IG + F+ + ++ Sbjct: 95 KGKNGDLPPRKDFGDKWHNKILELLPNIELFILIGKYAQGFYLKGKLKD------NLTDT 148 Query: 220 CTPHSII--PTLATVHPQEL-IQYPLIKKNTW 248 + VHP L I+ +KKN W Sbjct: 149 VKAYKEYLPKFFPIVHPSPLNIR--WLKKNPW 178 >gi|332359622|gb|EGJ37439.1| uracil DNA glycosylase [Streptococcus sanguinis SK355] Length = 194 Score = 42.0 bits (97), Expect = 0.075, Method: Composition-based stats. Identities = 22/169 (13%), Positives = 45/169 (26%), Gaps = 20/169 (11%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + I+G P +G + K+G L K L E + P Sbjct: 32 PRNARINIVGQAPGLKTQEAGLYWKDKSGERLRKWLGVDEETFYNSGYFAVLPMDFYFPG 91 Query: 165 NLSNIEMEICRPIIMRQIELISP--------KILLFIGNKTKNFFFNNDAQKTYQNLGKW 216 + + ++ + + P ++ + IG + ++ + + Sbjct: 92 HGKSGDLPPRKGFADK---WHQPILELLPDIELTILIGQYAQKYYLHQKGNIKLTETVQH 148 Query: 217 SNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKN 260 P VHP + + P L L K + Sbjct: 149 YQDYLPD----FFPLVHPSPRNQIWMAKNPWFAAQVVPDLQKLVKNIME 193 >gi|312866643|ref|ZP_07726857.1| uracil-DNA glycosylase family protein [Streptococcus parasanguinis F0405] gi|311097724|gb|EFQ55954.1| uracil-DNA glycosylase family protein [Streptococcus parasanguinis F0405] Length = 194 Score = 42.0 bits (97), Expect = 0.077, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 53/168 (31%), Gaps = 22/168 (13%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + IIG P +G + K+G+ L + L E + + P Sbjct: 32 PKTARINIIGQAPGLKTQEAGIYWKDKSGDRLREWLGVDEDTFYNSGLFAVIPMDFYFPG 91 Query: 165 NLSNIEMEICRPI---IMRQIELISP--KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + ++ + Q+ P ++ L IG + ++ + GK + Sbjct: 92 HGKSGDLPPRKGFAEKWHPQLLKECPDIELTLLIGQYAQAYYLHEKVS------GKVTER 145 Query: 220 CTPHSIIPTLATV----HPQ-----ELIQYPLIKKNTWHALITLKKAL 258 L T HP + + P + L TL + + Sbjct: 146 VHHFKDY--LPTYFPLVHPSPRNQIWMAKNPWFEAEVVPELQTLVQEI 191 >gi|113970849|ref|YP_734642.1| phage SPO1 DNA polymerase domain-containing protein [Shewanella sp. MR-4] gi|113885533|gb|ABI39585.1| phage SPO1 DNA polymerase domain protein [Shewanella sp. MR-4] Length = 240 Score = 42.0 bits (97), Expect = 0.079, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 61/231 (26%), Gaps = 44/231 (19%) Query: 70 IAQKACSLHELKSLLRSFHDCHLCST-----SLSTICATQTEGQDLMIIGYTPSDSDNIS 124 A + EL LL+ C LC + + A + ++I G P + Sbjct: 8 PAIEPNGSAELSILLKQIRACQLCQGELPLPAKPILQA--SSQARILIAGQAPGVKTHHK 65 Query: 125 GKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEME-------IC 174 G PF +G L L + I + P + + Sbjct: 66 GIPFDDASGERLRAWLNVSREQFYDPALFAIVPMGFCFPGTIERNGKKQGDKPPRPECAA 125 Query: 175 RPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY-----QNLGKWSNLCTPHSIIPT- 228 + +++L +G ++ + + + I Sbjct: 126 TWHAKLLALMPQIELVLVLGQYAIDYHLPRTRAIDTTDEALSSQAIVVSTPQTNKKITVT 185 Query: 229 -------------LATVHPQ-----ELIQYPLIKKNTWHALITLKKALKNL 261 + HP L Q+P ++ L TL+ + L Sbjct: 186 QAIEQWSLYWPRLMVMPHPSPRNNLWLKQHPEFER---EQLPTLQARIAGL 233 >gi|296876343|ref|ZP_06900395.1| uracil-DNA glycosylase [Streptococcus parasanguinis ATCC 15912] gi|296432633|gb|EFH18428.1| uracil-DNA glycosylase [Streptococcus parasanguinis ATCC 15912] Length = 194 Score = 42.0 bits (97), Expect = 0.079, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 53/168 (31%), Gaps = 22/168 (13%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + IIG P +G + K+G+ L + L E + + P Sbjct: 32 PKTARINIIGQAPGLKTQEAGIYWKDKSGDRLREWLGVDEDTFYNSGLFAVIPMDFYFPG 91 Query: 165 NLSNIEMEICRPI---IMRQIELISP--KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + ++ + Q+ P ++ L IG + ++ + GK + Sbjct: 92 HGKSGDLPPRKGFAEKWHPQLLKECPDIELTLLIGQYAQAYYLHEKVS------GKVTER 145 Query: 220 CTPHSIIPTLATV----HPQ-----ELIQYPLIKKNTWHALITLKKAL 258 L T HP + + P + L TL + + Sbjct: 146 VHHFKDY--LPTYFPLVHPSPRNQIWMAKNPWFEAEVVPELQTLVQEI 191 >gi|15789887|ref|NP_279711.1| hypothetical protein VNG0707C [Halobacterium sp. NRC-1] gi|10580289|gb|AAG19191.1| conserved hypothetical protein [Halobacterium sp. NRC-1] Length = 199 Score = 42.0 bits (97), Expect = 0.080, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 38/121 (31%), Gaps = 16/121 (13%) Query: 96 SLSTICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQSIEI-------- 145 S + D+ +IG P +G PF+G G+ L L+ + Sbjct: 5 CESFVPGHGDANADIHVIGDHPGVHGGTDTGTPFTGSAAGDRLRSALRDAGVLTTAADDT 64 Query: 146 ----MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201 S + P P G + + P ++ I+ +LL +G + Sbjct: 65 PPIDDPDNSFFSYLHPCVPEGT--PTPADYRELEPFFDAELRAITAHVLLPVGERATTHV 122 Query: 202 F 202 Sbjct: 123 L 123 >gi|223932532|ref|ZP_03624533.1| Uracil-DNA glycosylase superfamily [Streptococcus suis 89/1591] gi|302024158|ref|ZP_07249369.1| uracil DNA glycosylase superfamily protein [Streptococcus suis 05HAS68] gi|330833112|ref|YP_004401937.1| Uracil-DNA glycosylase superfamily [Streptococcus suis ST3] gi|223898803|gb|EEF65163.1| Uracil-DNA glycosylase superfamily [Streptococcus suis 89/1591] gi|329307335|gb|AEB81751.1| Uracil-DNA glycosylase superfamily [Streptococcus suis ST3] Length = 192 Score = 42.0 bits (97), Expect = 0.080, Method: Composition-based stats. Identities = 18/136 (13%), Positives = 45/136 (33%), Gaps = 10/136 (7%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPP 161 ++IIG P G+ F +GN L + L + I + ++P Sbjct: 31 PSTAKILIIGQAPGLKTQEKGRLFDDASGNNLRQWLGVDRQTFYESGHFAILPMDFYYPG 90 Query: 162 GNR--NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + +L + + + +L ++ + +GN + ++ + + + + Sbjct: 91 KGKSGDLPPRKDFAPKWHPLIMKQLPQIELTILVGNYAQTYYLEKSQRNLTERVKHADDY 150 Query: 220 CTPHSIIPTLATVHPQ 235 + HP Sbjct: 151 LPKY-----FPLPHPS 161 >gi|148998297|ref|ZP_01825766.1| hypothetical protein CGSSp11BS70_03816 [Streptococcus pneumoniae SP11-BS70] gi|168576477|ref|ZP_02722351.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae MLV-016] gi|307067239|ref|YP_003876205.1| hypothetical protein SPAP_0610 [Streptococcus pneumoniae AP200] gi|147755940|gb|EDK62984.1| hypothetical protein CGSSp11BS70_03816 [Streptococcus pneumoniae SP11-BS70] gi|183577700|gb|EDT98228.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae MLV-016] gi|306408776|gb|ADM84203.1| hypothetical protein SPAP_0610 [Streptococcus pneumoniae AP200] Length = 192 Score = 42.0 bits (97), Expect = 0.085, Method: Composition-based stats. Identities = 23/165 (13%), Positives = 46/165 (27%), Gaps = 15/165 (9%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159 + + IIG P +G + K+G+ L L + + + + Sbjct: 32 PKTARINIIGQAPGLKTQEAGLYWKDKSGDRLRDWLGVDEDTFYNSGYFAVLPMDFYFPG 91 Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + +L + EL ++ L IG + ++ K Sbjct: 92 HGKSGDLPPRTGFAEKWHPQLLQELPDIQLTLLIGQYAQAYYLQEKISGKVTERVKHYKD 151 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKAL 258 P + HP + + P + L +K L Sbjct: 152 YLPAYFLLV----HPSPRNQIWMAKNPWFEAEVVPDLKKRIKTIL 192 >gi|257054035|ref|YP_003131868.1| hypothetical protein Huta_2974 [Halorhabdus utahensis DSM 12940] gi|256692798|gb|ACV13135.1| conserved hypothetical protein [Halorhabdus utahensis DSM 12940] Length = 217 Score = 42.0 bits (97), Expect = 0.086, Method: Composition-based stats. Identities = 19/147 (12%), Positives = 38/147 (25%), Gaps = 10/147 (6%) Query: 98 STICATQTEGQDLMIIGYTPSDS-DNISGKPFSGKTG-NMLDKMLQSIEIMRTQIHISMI 155 + D IIG P + PF+ G L L ++R + Sbjct: 29 RFVPGFGDVEADFQIIGDHPGIHGGVTTSVPFTETDGAKRLQDALLQGGLLRKAGAPPTV 88 Query: 156 SPWHPPGNRNLSNI------EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209 + + + ++ I+ +LL +G + + N + Sbjct: 89 DSTYLSYLHPSVPEQAPTDDDYTREETFVEAEVRAIAAHVLLPVGERATRWVLENMTTEP 148 Query: 210 YQNL--GKWSNLCTPHSIIPTLATVHP 234 +L S + P Sbjct: 149 SDDLDMAALHGREIVGSGWLVVPIADP 175 >gi|259418274|ref|ZP_05742192.1| alpha-glucosidase [Silicibacter sp. TrichCH4B] gi|259345669|gb|EEW57513.1| alpha-glucosidase [Silicibacter sp. TrichCH4B] Length = 550 Score = 42.0 bits (97), Expect = 0.090, Method: Composition-based stats. Identities = 25/234 (10%), Positives = 56/234 (23%), Gaps = 32/234 (13%) Query: 1 MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPIT 54 + S+ L+ Q+ +L F+ + GV + N ++ + + Q + Sbjct: 179 LVSQPDLNFHCDAVQDALLDATRFWLERGVDGFRLDTINFYMHDKELRSNPALPKDQRNS 238 Query: 55 NIRHIHSP-LVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113 NI +P Q+ + +L L + + + + + L I+ Sbjct: 239 NIAPSVNPYNHQEHLYSKNQPENLEFLARFRALLDEYP----AKTAVGEVGDAQRGLEIL 294 Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173 G +G TG + + + Sbjct: 295 GQ-----------YTAGNTGVHMCYAFEFLAKDPLIAARVAEVFAKVDNVAADGWACWAF 343 Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227 + R + + A G +P Sbjct: 344 SNHDVQRHVSRWNLS----------EAALRLHATLIMCLRGSVCIYQGEELGLP 387 >gi|254474084|ref|ZP_05087476.1| alpha-glucosidase protein [Pseudovibrio sp. JE062] gi|211956780|gb|EEA91988.1| alpha-glucosidase protein [Pseudovibrio sp. JE062] Length = 554 Score = 42.0 bits (97), Expect = 0.091, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 38/105 (36%), Gaps = 6/105 (5%) Query: 9 QEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQAD 68 Q+ +L A F+ GV + N ++ Q ++ + ++ ++ Q Sbjct: 196 QQAVLDAARFWLKLGVDGFRLDTVNFYVHDKQLRDNPPYPDPDSLADVTGVNPYAFQDHK 255 Query: 69 SIAQKACSLHELKSLLRSFHDCHLCSTSLSTI--CATQTEGQDLM 111 + +L L+ L ++ + +T+ E ++M Sbjct: 256 FDKSQPENLKFLERLREVMNEFP----NTTTVGEIGAGHEASEIM 296 >gi|294785178|ref|ZP_06750466.1| uracil DNA glycosylase family protein [Fusobacterium sp. 3_1_27] gi|294486892|gb|EFG34254.1| uracil DNA glycosylase family protein [Fusobacterium sp. 3_1_27] Length = 197 Score = 42.0 bits (97), Expect = 0.091, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 45/155 (29%), Gaps = 17/155 (10%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 E ++I+G P + + K+G+ L E ++ I P Sbjct: 35 PEKARIVIVGQAPGLKAQENRLYWKDKSGDKLRIWTGIDEKTFYSSNLLAIIPMDFYYPG 94 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + L ++ + IG + F+ + ++ Sbjct: 95 KGKNGDLPPRKDFGDKWHNKILELLPDVELFILIGKYAQGFYLKGKLKD------NLTDT 148 Query: 220 CTPHSII--PTLATVHPQEL-IQYPLIKKNTW-HA 250 + VHP L I+ +KKN W Sbjct: 149 VRAYKEYLPKFFPIVHPSPLNIR--WLKKNPWFED 181 >gi|237742254|ref|ZP_04572735.1| uracil-DNA glycosylase [Fusobacterium sp. 4_1_13] gi|229429902|gb|EEO40114.1| uracil-DNA glycosylase [Fusobacterium sp. 4_1_13] Length = 197 Score = 42.0 bits (97), Expect = 0.091, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 45/155 (29%), Gaps = 17/155 (10%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 E ++I+G P + + K+G+ L E ++ I P Sbjct: 35 PEKARIVIVGQAPGLKAQENRLYWKDKSGDKLRIWTGIDEKTFYSSNLLAIIPMDFYYPG 94 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + L ++ + IG + F+ + ++ Sbjct: 95 KGKSGDLPPRKDFGDKWHNKILELLPDVELFILIGKYAQGFYLKGKLKD------NLTDT 148 Query: 220 CTPHSII--PTLATVHPQEL-IQYPLIKKNTW-HA 250 + VHP L I+ +KKN W Sbjct: 149 VRAYKEYLPKFFPIVHPSPLNIR--WLKKNPWFED 181 >gi|99078280|ref|YP_611538.1| alpha amylase, catalytic region [Ruegeria sp. TM1040] gi|99035418|gb|ABF62276.1| alpha amylase catalytic region [Ruegeria sp. TM1040] Length = 550 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 23/234 (9%), Positives = 56/234 (23%), Gaps = 32/234 (13%) Query: 1 MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPIT 54 + S+ L+ Q +L + F+ + GV + N ++ + + Q Sbjct: 179 LVSQPDLNFHCPDVQNALLDVTRFWLERGVDGFRLDTINFYIHDKELRSNPALPKDQRNA 238 Query: 55 NIRHIHSP-LVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113 NI +P Q+ + +L L + + + + + L ++ Sbjct: 239 NIAPSVNPYNHQEHLYSKNQPENLDFLARFRALLDEYP----AKTAVGEVGDAQRGLELL 294 Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173 G +G TG + + + Sbjct: 295 GQ-----------YTAGNTGVHMCYAFEFLAKDPLTAARVAEVFERTDEVAADGWACWAF 343 Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227 + R + + + + G +P Sbjct: 344 SNHDVQRHVSR------WGLSDAALR--LHATLIMC--LRGSVCIYQGEELGLP 387 >gi|119358012|ref|YP_912656.1| uracil-DNA glycosylase superfamily protein [Chlorobium phaeobacteroides DSM 266] gi|119355361|gb|ABL66232.1| Uracil-DNA glycosylase superfamily [Chlorobium phaeobacteroides DSM 266] Length = 326 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 20/166 (12%), Positives = 40/166 (24%), Gaps = 16/166 (9%) Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ---SIEIMRTQIHISMISP 157 ++ + P SG + + + R I P Sbjct: 53 PLDGGINAQVLFLLEAPGPKAVASGFVSRDNPDETAKNFFELNIAAGLDRAATVCWNIVP 112 Query: 158 WHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS 217 W+ + + RQ ++L + A Sbjct: 113 WYIGTGTKIRAAHHDDI-----RQAREGLERLLALLPRIRVVALVGKKAASIES------ 161 Query: 218 NLCTPHSIIPTLATVHPQ--ELIQYPLIKKNTWHALITLKKALKNL 261 + + T HP + + P + ++AL + LK L Sbjct: 162 EILLMLPGVKVFTTPHPSPQFINRLPENRTILFYALTCISDELKEL 207 >gi|114048074|ref|YP_738624.1| phage SPO1 DNA polymerase domain-containing protein [Shewanella sp. MR-7] gi|113889516|gb|ABI43567.1| phage SPO1 DNA polymerase domain protein [Shewanella sp. MR-7] Length = 240 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 61/231 (26%), Gaps = 44/231 (19%) Query: 70 IAQKACSLHELKSLLRSFHDCHLCST-----SLSTICATQTEGQDLMIIGYTPSDSDNIS 124 A + EL LL+ C LC + + A + ++I G P + Sbjct: 8 PAIEPNGSAELSVLLKQIRACQLCQAELPLPAKPILQA--SSQARILIAGQAPGVKTHHK 65 Query: 125 GKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEME-------IC 174 G PF +G L L + I + P + + Sbjct: 66 GIPFDDASGERLRAWLNVSREQFYDPALFAIVPMGFCFPGTIERNGKKQGDKPPRPECAA 125 Query: 175 RPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY-----QNLGKWSNLCTPHSIIPT- 228 + +++L +G ++ + + + I Sbjct: 126 TWHTKLLALMPQIELVLVLGQYAIDYHLPRTRAIDTTDDALSSQAITISTPQTNKKITVT 185 Query: 229 -------------LATVHPQ-----ELIQYPLIKKNTWHALITLKKALKNL 261 + HP L Q+P ++ L TL+ + L Sbjct: 186 QAIEQWSLYWPRLMVMPHPSPRNNLWLKQHPEFER---EQLPTLQARIAGL 233 >gi|319938793|ref|ZP_08013157.1| uracil DNA glycosylase [Streptococcus anginosus 1_2_62CV] gi|319811843|gb|EFW08109.1| uracil DNA glycosylase [Streptococcus anginosus 1_2_62CV] Length = 194 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 21/191 (10%), Positives = 56/191 (29%), Gaps = 18/191 (9%) Query: 75 CSLHELKSLL-RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 +L ++K + + + + A + + I+G P + ++ K+G Sbjct: 2 ETLEDIKKAIMADSQNQAYTKRGIEPLFAA-PKTARINIVGQAPGIRAQETRLYWNDKSG 60 Query: 134 NMLDKMLQSIEIMRTQIHISMISP--WHPPGNRNLSNIEMEICRPIIMRQIE---LISPK 188 + L + + P ++ PG+ ++ Q L + Sbjct: 61 DRLREWMGVDYDTFYHSGYFAAIPMDFYFPGHGKSGDLPPRKGFAEKWHQPILDLLPDLE 120 Query: 189 ILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPL 242 + + IG + ++ + + + + VHP + + P Sbjct: 121 LTVLIGQYAQKYYLHQKGTVKLTDTVKHYQDYLPEF-----FPLVHPSPRNQIWMAKNPW 175 Query: 243 IKKNTWHALIT 253 + L Sbjct: 176 FAETVIPDLRE 186 >gi|328946362|gb|EGG40504.1| uracil DNA glycosylase [Streptococcus sanguinis SK1087] Length = 194 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 20/167 (11%), Positives = 48/167 (28%), Gaps = 20/167 (11%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + I+G P +G + K+G+ L + L E + P Sbjct: 32 PKNARINIVGQAPGLKTQQAGLYWKDKSGDRLREWLGVDEETFYHSGYFAVLPMDFYFPG 91 Query: 165 NLSNIEMEICRPIIMRQIELISP--------KILLFIGNKTKNFFFNNDAQKTYQNLGKW 216 + + ++ + + P ++ + IG + ++ + + Sbjct: 92 HGKSGDLPPRKNFADK---WHQPILELLPDIELTILIGQYAQKYYLHQTGNIKLTETVQH 148 Query: 217 SNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258 P VHP + + P + L L + + Sbjct: 149 YQDYLPD----FFPLVHPSPRNQIWMAKNPWFEAEVVPELQVLVQKI 191 >gi|306825692|ref|ZP_07459031.1| uracil-DNA glycosylase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432053|gb|EFM35030.1| uracil-DNA glycosylase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 196 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 42/136 (30%), Gaps = 9/136 (6%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP--WHPPG 162 + I+G P +G + K+G+ L + L E + + P ++ PG Sbjct: 32 PTTARINIVGQAPGFKTQEAGIYWKDKSGDRLREWLGVDEDTFYNSGLFAVIPMDFYFPG 91 Query: 163 NRNL---SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + + E + ++ L IG + ++ + K Sbjct: 92 HGKSGDLPPRKGFAEKWHPQLLKECPNIELTLLIGQYAQAYYLHEKVSGKVTERVKHYQN 151 Query: 220 CTPHSIIPTLATVHPQ 235 P VHP Sbjct: 152 YLPEY----FPLVHPS 163 >gi|171682348|ref|XP_001906117.1| hypothetical protein [Podospora anserina S mat+] gi|170941133|emb|CAP66783.1| unnamed protein product [Podospora anserina S mat+] Length = 816 Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 27/76 (35%), Gaps = 10/76 (13%) Query: 26 WVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHE------ 79 V DEP + + + A P++ +P + + A + E Sbjct: 349 AVEDEPVADVPAPTPGPS-TAAPASAPVSPSAPTPTPAAASPATRTKSAKTPAERAKRTT 407 Query: 80 ---LKSLLRSFHDCHL 92 LKSLL+S C L Sbjct: 408 QDTLKSLLKSLEGCAL 423 >gi|117921121|ref|YP_870313.1| phage SPO1 DNA polymerase domain-containing protein [Shewanella sp. ANA-3] gi|117613453|gb|ABK48907.1| phage SPO1 DNA polymerase domain protein [Shewanella sp. ANA-3] Length = 237 Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 33/229 (14%), Positives = 63/229 (27%), Gaps = 42/229 (18%) Query: 69 SIAQKACSLHELKSLLRSFHDCHLCST-----SLSTICATQTEGQDLMIIGYTPSDSDNI 123 A + EL LL+ C LC + + A + ++I G P + Sbjct: 7 RPASEPNCSAELSELLKQIRACQLCQAELPLPAKPILQA--SSQARILIAGQAPGVKTHH 64 Query: 124 SGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEME-------I 173 G PF +G L L + I + P + + Sbjct: 65 KGIPFDDASGERLRAWLNVSREQFYDPALFAIVPMGFCFPGTIERNGKKQGDKPPRPECA 124 Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFF----------------NNDAQKTYQNLGKWS 217 + +++L +G ++ +N + + Sbjct: 125 ATWHAKLLALMPQIELVLVLGQYAIDYHLPRAQAIGALNSQAIAVSNPQANKKITVTQAI 184 Query: 218 NLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKNL 261 + H + HP L Q+P + L TL+ + +L Sbjct: 185 EQWSLHWP-RLMVMPHPSPRNNLWLKQHPEFE---HEHLPTLQARIADL 229 >gi|34763106|ref|ZP_00144077.1| Hypothetical Protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887240|gb|EAA24340.1| Hypothetical Protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 197 Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 44/153 (28%), Gaps = 17/153 (11%) Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL 166 ++I+G P + + K+G+ L E ++ I P Sbjct: 37 KARIVIVGQAPGLKAQENRLYWKDKSGDKLRIWTGIDEKTFYSSNLLAIIPMDFYYPGKG 96 Query: 167 -----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221 + + L ++ + IG + F+ + ++ Sbjct: 97 KNGDLPPRKDFGDKWHNKILELLPDVELFILIGKYAQGFYLKGKLKD------NLTDTVR 150 Query: 222 PHSII--PTLATVHPQEL-IQYPLIKKNTW-HA 250 + VHP L I+ +KKN W Sbjct: 151 AYKEYLPKFFPIVHPSPLNIR--WLKKNPWFED 181 >gi|331266834|ref|YP_004326464.1| uracil DNA glycosylase family protein [Streptococcus oralis Uo5] gi|326683506|emb|CBZ01124.1| uracil DNA glycosylase family protein [Streptococcus oralis Uo5] Length = 196 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 24/167 (14%), Positives = 48/167 (28%), Gaps = 15/167 (8%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + I+G P +G + K+G+ L L E + + P Sbjct: 32 PKTARINIVGQAPGLKTQEAGIYWKDKSGDRLRDWLGVDEDTFYNSGLFAVLPMDFYFPG 91 Query: 165 NLSNIEMEICRPI---IMRQIELISP--KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + ++ Q+ P ++ L IG + ++ + K Sbjct: 92 HGKSGDLPPRTGFAEKWHPQLLQELPDIQLTLLIGQYAQAYYLHEKVSGKVTERVKHYKD 151 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKALKN 260 P VHP + + P + L +K L Sbjct: 152 YLPE----FFPLVHPSPRNQIWMAKNPWFESEVVPELKKRIKAILGE 194 >gi|262282576|ref|ZP_06060344.1| uracil-DNA glycosylase [Streptococcus sp. 2_1_36FAA] gi|262261867|gb|EEY80565.1| uracil-DNA glycosylase [Streptococcus sp. 2_1_36FAA] Length = 194 Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 21/200 (10%), Positives = 58/200 (29%), Gaps = 26/200 (13%) Query: 75 CSLHELKSLL-RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 ++ ++ + + + + A + + I+G P +G + K+G Sbjct: 2 RTIEDIAKAIMADPENQEYTKQGIKPLFAA-PKNARINIVGQAPGLKTQEAGLYWKDKSG 60 Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP------ 187 + L + L E + P + + ++ + + P Sbjct: 61 DRLREWLGVDEETFYNSGYFAVLPMDFYFPGHGKSGDLPPRKDFADK---WHQPILDLLP 117 Query: 188 --KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII--PTLATVHPQ-----ELI 238 ++ + IG + ++ + K + + VHP + Sbjct: 118 DIELTILIGQYAQKYYLHQKGNI------KLTETVQRYKDYLPDFFPLVHPSPRNQIWMA 171 Query: 239 QYPLIKKNTWHALITLKKAL 258 + P + L L + + Sbjct: 172 KNPWFEAEVVPKLQALVQKI 191 >gi|315223174|ref|ZP_07865035.1| uracil DNA glycosylase family protein [Streptococcus anginosus F0211] gi|315187606|gb|EFU21360.1| uracil DNA glycosylase family protein [Streptococcus anginosus F0211] Length = 193 Score = 41.3 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 21/191 (10%), Positives = 56/191 (29%), Gaps = 18/191 (9%) Query: 75 CSLHELKSLL-RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 +L ++K + + + + A + + I+G P + ++ K+G Sbjct: 2 ETLEDIKKAIMADSQNQAYTERGIEPLFAA-PKTARINIVGQAPGIKAQETRLYWNDKSG 60 Query: 134 NMLDKMLQSIEIMRTQIHISMISP--WHPPGNRNLSNIEMEICRPIIMRQ---IELISPK 188 + L + + P ++ PG+ ++ Q L + Sbjct: 61 DRLREWMGVDYDTFYHSGYFAAIPMDFYFPGHGKSGDLPPRKGFAEKWHQPILELLPDLE 120 Query: 189 ILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPL 242 + + IG + ++ + + + + VHP + + P Sbjct: 121 LTILIGQYAQKYYLHQKGTVKLTDTVKHYQDYLPEF-----FPLVHPSPRNQIWMAKNPW 175 Query: 243 IKKNTWHALIT 253 + L Sbjct: 176 FAETVIPDLRE 186 >gi|283769426|ref|ZP_06342324.1| uracil-DNA glycosylase, family 4 [Bulleidia extructa W1219] gi|283103951|gb|EFC05336.1| uracil-DNA glycosylase, family 4 [Bulleidia extructa W1219] Length = 196 Score = 41.3 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 52/156 (33%), Gaps = 22/156 (14%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + L+I+G P S ++ +GN L L + R + + + + P Sbjct: 31 PKEAKLVIVGQAPGIKAQESHLYWNDPSGNRLRDWL---GLSREEFYQTNLIAHLPMDFY 87 Query: 165 NL--------SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGK 215 + + + + +L ++ L IG + ++ +KT + + Sbjct: 88 FPGSAKRGDLAPRKGFAQKWHPLLLKQLSEVELFLLIGQYAQAYYLKERRKKTLTETVKN 147 Query: 216 WSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKN 246 + N + L VHP L + P + Sbjct: 148 YFNYLPEY-----LPLVHPSGRNGIWLKKNPWFEAE 178 >gi|330826245|ref|YP_004389548.1| uracil-DNA glycosylase superfamily [Alicycliphilus denitrificans K601] gi|329311617|gb|AEB86032.1| uracil-DNA glycosylase superfamily [Alicycliphilus denitrificans K601] Length = 196 Score = 41.3 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 48/167 (28%), Gaps = 10/167 (5%) Query: 74 ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 + SL L +R+ C G ++I G P + SG PF +G Sbjct: 2 SESLPALLHRVRACTICAAHLPLGPRPVLQAAAGARILIAGQAPGRKVHASGIPFDDASG 61 Query: 134 NMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI- 189 L L + I + +P + C P + P I Sbjct: 62 ARLRAWLGLSPEQFYDPALVAILPMGFCYPGPGPSGDAPPRPECPPAWRAPLLERLPHIA 121 Query: 190 -LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235 + +G + ++ + + +W T+ HP Sbjct: 122 LTVVLGQYALAWHLPQAPRQVTRAVQEWQRHWPH-----TVVLPHPS 163 >gi|319425874|gb|ADV53948.1| phage SPO1 DNA polymerase domain-containing protein [Shewanella putrefaciens 200] Length = 228 Score = 41.3 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 49/151 (32%), Gaps = 14/151 (9%) Query: 72 QKACSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129 + S+ L + +R+ + C HL + + A + ++I G P + G PF Sbjct: 2 PSSASMTSLLAKIRACNQCQAHLPLAAKPILQA--SRQARILIAGQAPGIKTHDKGIPFD 59 Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI-----CRPIIMRQ 181 +G L L + I + P + + C Q Sbjct: 60 DASGERLRSWLNVTREQFYNPALFAIIPMGFCFPGSIERNGKKQGDNPPRPECAATWHPQ 119 Query: 182 IELISPKI--LLFIGNKTKNFFFNNDAQKTY 210 + + P+I ++ +G ++ + Sbjct: 120 LLALMPQIELIVILGQYAIDYHLPRELFTES 150 >gi|319761903|ref|YP_004125840.1| uracil-DNA glycosylase superfamily [Alicycliphilus denitrificans BC] gi|317116464|gb|ADU98952.1| uracil-DNA glycosylase superfamily [Alicycliphilus denitrificans BC] Length = 200 Score = 41.3 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 29/200 (14%), Positives = 55/200 (27%), Gaps = 18/200 (9%) Query: 72 QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 L L +R+ C G ++I G P + SG PF Sbjct: 4 PANEPLAALLGRVRACTICAAHLPLGPRPVLQAAAGARILIAGQAPGRKVHASGIPFDDA 63 Query: 132 TGNMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188 +G L L + I + +P + C P + P Sbjct: 64 SGARLRAWLGLSPEQFYDPALVAILPMGFCYPGPGPSGDAPPRPECPPAWRAPLLARLPH 123 Query: 189 I--LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYP 241 I + +G + ++ + + W T+ HP L ++P Sbjct: 124 IALTVVLGQYALAWHLPQSPRQVTRAVQDWQRHWPH-----TVVLPHPSPRNNGWLARHP 178 Query: 242 LIKKNTWHALITLKKALKNL 261 + L ++ + + Sbjct: 179 WFEAEL---LPQVRARVAAV 195 >gi|260430804|ref|ZP_05784776.1| oligo-1,6-glucosidase [Silicibacter lacuscaerulensis ITI-1157] gi|260418245|gb|EEX11503.1| oligo-1,6-glucosidase [Silicibacter lacuscaerulensis ITI-1157] Length = 551 Score = 40.9 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 48/140 (34%), Gaps = 20/140 (14%) Query: 1 MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPIT 54 +TS+ L+ Q+ +L +A F+ D GV + N +++Q ++ Q Sbjct: 179 LTSQPDLNFHNPDVQDALLDVARFWLDMGVDGFRLDTINFYFHDAQLRDNPALPLDQRNA 238 Query: 55 NIRHIHSPLVQQ----ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICAT-QTEGQD 109 I + +P Q + S + L L++L + + Sbjct: 239 TIAPMVNPYNHQDHLYSKSQPENIAFLERLRALTDQYDG--------RACLGEVGDAQRG 290 Query: 110 LMIIGY-TPSDSDNISGKPF 128 L I+G T D F Sbjct: 291 LEIMGEYTRGDKRMHMCYAF 310 >gi|227873088|ref|ZP_03991382.1| uracil-DNA glycosylase [Oribacterium sinus F0268] gi|227841069|gb|EEJ51405.1| uracil-DNA glycosylase [Oribacterium sinus F0268] Length = 211 Score = 40.9 bits (94), Expect = 0.17, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 51/179 (28%), Gaps = 16/179 (8%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134 +L EL +++ + + E ++++G P SG PF +G Sbjct: 6 KALEELVEEIKALPENQSYTERGIPPIFQFHEESRILLVGQAPGRKVEESGIPFHDLSGK 65 Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191 L + + + + ++ I M + G + + L K+ + Sbjct: 66 RLMEWMGISEEVFYGKSISIIPMDFYYPGKGKGGDLPPRPFMRKYHDAVAALLPKVKLRI 125 Query: 192 FIGNKTKNF------------FFNNDAQKTYQNLGKWSNLCTPHSI-IPTLATVHPQEL 237 IG + G S L S I VHP L Sbjct: 126 LIGKYAIAHYDPKGAKLPLKDLLYPCGDAWGKAHGTSSLLSGQTSSEILNFPLVHPSPL 184 >gi|327197775|ref|YP_004301473.1| gp140 [Brochothrix phage A9] gi|299810375|gb|ADJ53174.1| gp140 [Brochothrix phage A9] Length = 700 Score = 40.9 bits (94), Expect = 0.17, Method: Composition-based stats. Identities = 9/94 (9%), Positives = 28/94 (29%), Gaps = 3/94 (3%) Query: 163 NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP 222 + + E++ + ++I P I++ +G + + ++ T Sbjct: 93 YKPPTAGELKPEYQNLRQRINAYKPDIIIPMGGSGCKALLGKNTITALRGRPVLKDVVTE 152 Query: 223 HSII---PTLATVHPQELIQYPLIKKNTWHALIT 253 L T ++ P + ++ Sbjct: 153 EGETHTCYILPTFSISHMLASPSVSRHVKTDFRL 186 >gi|293364971|ref|ZP_06611688.1| uracil DNA glycosylase [Streptococcus oralis ATCC 35037] gi|291316421|gb|EFE56857.1| uracil DNA glycosylase [Streptococcus oralis ATCC 35037] Length = 205 Score = 40.9 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 50/171 (29%), Gaps = 23/171 (13%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159 + + I+G P +G + K+G+ L + L + + + + Sbjct: 41 PKTARINIVGQAPGFKTQEAGIYWKDKSGDRLREWLGVDEDTFYNSGYFAVLPMDFYFPG 100 Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + +L + EL ++ L IG + ++ GK + Sbjct: 101 HGKSGDLPPRTGFAEKWHPQLLQELPDIQLTLLIGQYAQAYYLQEKVS------GKVTER 154 Query: 220 CTPHSIIPTLATV----HPQ-----ELIQYPLIKKNTWHALIT-LKKALKN 260 + L T HP + + P + L +K L Sbjct: 155 VKHYQNY--LPTYFPLVHPSPRNQIWMAKNPWFESEVVPELKKRIKTILGE 203 >gi|307703220|ref|ZP_07640166.1| uracil DNA glycosylase superfamily protein [Streptococcus oralis ATCC 35037] gi|307623295|gb|EFO02286.1| uracil DNA glycosylase superfamily protein [Streptococcus oralis ATCC 35037] Length = 196 Score = 40.9 bits (94), Expect = 0.21, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 50/171 (29%), Gaps = 23/171 (13%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159 + + I+G P +G + K+G+ L + L + + + + Sbjct: 32 PKTARINIVGQAPGFKTQEAGIYWKDKSGDRLREWLGVDEDTFYNSGYFAVLPMDFYFPG 91 Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + +L + EL ++ L IG + ++ GK + Sbjct: 92 HGKSGDLPPRTGFAEKWHPQLLQELPDIQLTLLIGQYAQAYYLQEKVS------GKVTER 145 Query: 220 CTPHSIIPTLATV----HPQ-----ELIQYPLIKKNTWHALIT-LKKALKN 260 + L T HP + + P + L +K L Sbjct: 146 VKHYQNY--LPTYFPLVHPSPRNQIWMAKNPWFESEVVPELKKRIKTILGE 194 >gi|319947165|ref|ZP_08021399.1| uracil DNA glycosylase [Streptococcus australis ATCC 700641] gi|319747213|gb|EFV99472.1| uracil DNA glycosylase [Streptococcus australis ATCC 700641] Length = 214 Score = 40.5 bits (93), Expect = 0.21, Method: Composition-based stats. Identities = 23/169 (13%), Positives = 50/169 (29%), Gaps = 19/169 (11%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164 + + IIG P + + K+G+ L + L E + + P Sbjct: 49 PKTARINIIGQAPGLKTQEACLYWKDKSGDRLREWLGVDEETFYHSGLFAVIPMDFYFPG 108 Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + + + + E ++ L IG + ++ + GK + Sbjct: 109 HGKSGDLPPRKGFAEKWHPLLLKECPDIELTLLIGQYAQAYYLHEKVS------GKVTER 162 Query: 220 CTPHSII--PTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKALKN 260 + VHP + + P + AL +++ L Sbjct: 163 VRRYKDYLPDYFPLVHPSPRNQIWMAKNPWFEAEVVPALQARVQQILAE 211 >gi|313891296|ref|ZP_07824914.1| uracil-DNA glycosylase family protein [Streptococcus pseudoporcinus SPIN 20026] gi|313120363|gb|EFR43484.1| uracil-DNA glycosylase family protein [Streptococcus pseudoporcinus SPIN 20026] Length = 200 Score = 40.5 bits (93), Expect = 0.22, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 50/171 (29%), Gaps = 21/171 (12%) Query: 103 TQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG 162 ++I+G P + ++ ++G L + L I P Sbjct: 37 DAPSSAKIVIVGQAPGIIAQKTKLFWNDRSGVKLRQWLDVDSDTFYHSGKFAILPMDFYY 96 Query: 163 NRNLSNIEMEICRPIIMRQIELISP--------KILLFIGNKTKNFFFNNDAQKTYQNLG 214 ++ + + P ++++ +G + ++ +KT Sbjct: 97 PGKGKGGDLPPRKGFADK---WHQPLLDLLPTVELIILVGQYAQAYYLGKAKKKTLTETV 153 Query: 215 KWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKALK 259 K P VHP L + P ++ AL + K LK Sbjct: 154 KAYQDYLP----RFFPLVHPSPRNQLWLKKNPWFEEEVIPALQARVAKLLK 200 >gi|116250520|ref|YP_766358.1| alpha-glucosidase [Rhizobium leguminosarum bv. viciae 3841] gi|115255168|emb|CAK06242.1| putative alpha-glucosidase [Rhizobium leguminosarum bv. viciae 3841] Length = 550 Score = 40.5 bits (93), Expect = 0.22, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 50/136 (36%), Gaps = 12/136 (8%) Query: 1 MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYESQ-RKEKSIDSAIQPI 53 +TS+ ++ Q+++L + F+ + GV + N +++Q R ++ + Sbjct: 175 LTSQPDMNLHNPEVQDRLLDVVRFWLNRGVDGFRLDTINFYFHDTQLRDNPALAPERRNA 234 Query: 54 TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113 + ++ Q+ + +L LK + +++ + + L I+ Sbjct: 235 STAPAVNPYNFQEHIYDKNRPENLAFLKRFRAVLEEFP----AIAAVGEVGDSQRGLEIV 290 Query: 114 GY-TPSDSDNISGKPF 128 G T + F Sbjct: 291 GEYTSGNDKMHMCYAF 306 >gi|146319114|ref|YP_001198826.1| Uracil-DNA glycosylase [Streptococcus suis 05ZYH33] gi|146321319|ref|YP_001201030.1| Uracil-DNA glycosylase [Streptococcus suis 98HAH33] gi|253752162|ref|YP_003025303.1| uracil DNA glycosylase superfamily protein [Streptococcus suis SC84] gi|253753988|ref|YP_003027129.1| uracil DNA glycosylase superfamily protein [Streptococcus suis P1/7] gi|253755923|ref|YP_003029063.1| uracil DNA glycosylase superfamily protein [Streptococcus suis BM407] gi|145689920|gb|ABP90426.1| Uracil-DNA glycosylase [Streptococcus suis 05ZYH33] gi|145692125|gb|ABP92630.1| Uracil-DNA glycosylase [Streptococcus suis 98HAH33] gi|251816451|emb|CAZ52087.1| uracil DNA glycosylase superfamily protein [Streptococcus suis SC84] gi|251818387|emb|CAZ56215.1| uracil DNA glycosylase superfamily protein [Streptococcus suis BM407] gi|251820234|emb|CAR46671.1| uracil DNA glycosylase superfamily protein [Streptococcus suis P1/7] gi|292558750|gb|ADE31751.1| Uracil-DNA glycosylase superfamily [Streptococcus suis GZ1] gi|319758549|gb|ADV70491.1| Uracil-DNA glycosylase [Streptococcus suis JS14] Length = 192 Score = 40.5 bits (93), Expect = 0.22, Method: Composition-based stats. Identities = 17/136 (12%), Positives = 45/136 (33%), Gaps = 10/136 (7%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPP 161 ++IIG P G+ F +G+ L + L + I + ++P Sbjct: 31 PSTAKILIIGQAPGLKTQEKGRLFDDASGSNLRQWLGVDRQTFYESGHFAILPMDFYYPG 90 Query: 162 GNR--NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + +L + + + +L ++ + +GN + ++ + + + + Sbjct: 91 KGKSGDLPPRKDFAPKWHPLIMKQLPQIELTILVGNYAQTYYLEKSQRNLTERVKHADDY 150 Query: 220 CTPHSIIPTLATVHPQ 235 + HP Sbjct: 151 LPTY-----FPLPHPS 161 >gi|146292574|ref|YP_001182998.1| phage SPO1 DNA polymerase domain-containing protein [Shewanella putrefaciens CN-32] gi|145564264|gb|ABP75199.1| phage SPO1 DNA polymerase domain protein [Shewanella putrefaciens CN-32] Length = 228 Score = 40.5 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 49/151 (32%), Gaps = 14/151 (9%) Query: 72 QKACSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129 + S+ L + +R+ + C HL + + A + ++I G P + G PF Sbjct: 2 PSSASMTSLLAKIRACNQCQAHLPLAAKPILQA--SRQARILIAGQAPGIKTHDKGIPFD 59 Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEME-----ICRPIIMRQ 181 +G L L + I + P + + C Q Sbjct: 60 DASGERLRSWLNVTREQFYNPALFAIIPMGFCFPGSIERNGKKQGDKPPRPECAATWHPQ 119 Query: 182 IELISPKI--LLFIGNKTKNFFFNNDAQKTY 210 + + P+I ++ +G ++ + Sbjct: 120 LLALMPQIELIVILGQYAIDYHLPRELFTES 150 >gi|307704362|ref|ZP_07641279.1| uracil DNA glycosylase superfamily protein [Streptococcus mitis SK597] gi|307622122|gb|EFO01142.1| uracil DNA glycosylase superfamily protein [Streptococcus mitis SK597] Length = 196 Score = 40.5 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 22/167 (13%), Positives = 45/167 (26%), Gaps = 15/167 (8%) Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159 + + IIG P +G + ++G+ L L + + + + Sbjct: 32 PKTARINIIGQAPGLKTQEAGLYWKDRSGDRLRDWLGVDEDTFYNSGYFAVLPMDFYFPG 91 Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 + +L + EL ++ L IG + ++ K Sbjct: 92 HGKSGDLPPRTGFAEKWHPQLLQELPDIQLTLLIGQYAQAYYLQEKVSGKVTERVKHYQN 151 Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKALKN 260 P VHP + + + L +K L Sbjct: 152 YLPTY----FPLVHPSPRNQIWMAKNSWFESEVVPDLKKRIKTILGE 194 >gi|239978176|ref|ZP_04700700.1| uracil-DNA glycosylase [Streptomyces albus J1074] gi|291450071|ref|ZP_06589461.1| uracil-DNA glycosylase [Streptomyces albus J1074] gi|291353020|gb|EFE79922.1| uracil-DNA glycosylase [Streptomyces albus J1074] Length = 165 Score = 40.5 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 17/117 (14%), Positives = 35/117 (29%), Gaps = 13/117 (11%) Query: 141 QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTK 198 + + PP N + E + CRP + R+++L+ P + + +G Sbjct: 33 RDDGQRLYGTRLVSPVHCVPPDN-RPTPAERDTCRPWMARELDLLGPTLRAAVVLGGFGW 91 Query: 199 NFF---FNNDAQKTYQNL-----GKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247 + G + + P + L HP + + T Sbjct: 92 QALMPVLTAAGYVVPRPRPAFGHGAHARIEGPDGPLDLLGCYHPSP--RNTSTGRLT 146 >gi|120599430|ref|YP_964004.1| phage SPO1 DNA polymerase domain-containing protein [Shewanella sp. W3-18-1] gi|120559523|gb|ABM25450.1| phage SPO1 DNA polymerase domain protein [Shewanella sp. W3-18-1] Length = 228 Score = 40.5 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 49/151 (32%), Gaps = 14/151 (9%) Query: 72 QKACSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129 + S+ L + +R+ + C HL + + A + ++I G P + G PF Sbjct: 2 PNSASITSLLAKIRACNQCQAHLPLAAKPILQA--SRQARILIAGQAPGIKTHDKGIPFD 59 Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEME-----ICRPIIMRQ 181 +G L L + I + P + + C Q Sbjct: 60 DASGERLRSWLNVTREQFYNPALFAIIPMGFCFPGSIERNGKKQGDKPPRPECAATWHPQ 119 Query: 182 IELISPKI--LLFIGNKTKNFFFNNDAQKTY 210 + + P+I ++ +G ++ + Sbjct: 120 LLALMPQIELIVILGQYAIDYHLPRELFTES 150 >gi|241203144|ref|YP_002974240.1| alpha amylase catalytic region [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857034|gb|ACS54701.1| alpha amylase catalytic region [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 550 Score = 40.5 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 50/136 (36%), Gaps = 12/136 (8%) Query: 1 MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYESQ-RKEKSIDSAIQPI 53 +TS+ ++ Q+++L + F+ + GV + N +++Q R ++ + Sbjct: 175 LTSQPDMNLHNPEVQDRLLDVVRFWLNRGVDGFRLDTINFYFHDTQLRDNPALAPERRNA 234 Query: 54 TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113 + ++ Q+ + +L LK + +++ + + L I+ Sbjct: 235 STAPAVNPYNFQEHLYDKNRPENLAFLKRFRAVLEEFP----AIAAVGEVGDSQRGLEIV 290 Query: 114 GY-TPSDSDNISGKPF 128 G T + F Sbjct: 291 GEYTSGNDKMHMCYAF 306 >gi|198284754|ref|YP_002221075.1| hypothetical protein Lferr_2674 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666216|ref|YP_002427435.1| pyruvate dehydrogenase complex, E2 and E3 components [Acidithiobacillus ferrooxidans ATCC 23270] gi|198249275|gb|ACH84868.1| catalytic domain of components of various dehydrogenase complexes [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518429|gb|ACK79015.1| pyruvate dehydrogenase complex, E2 and E3 components [Acidithiobacillus ferrooxidans ATCC 23270] Length = 983 Score = 40.1 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 12/91 (13%), Positives = 26/91 (28%), Gaps = 3/91 (3%) Query: 32 NNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCH 91 + +I + I + + A+ A L++LK + + Sbjct: 441 IAQFDAIVTPGTAAIIAIAGNGPEGMPITITADHRVVNGAEAALFLNDLKQAIEHPEN-- 498 Query: 92 LCSTSLSTICATQTEGQDLMIIGYTPSDSDN 122 S + +++IG P D Sbjct: 499 -WLGSGGPVIPEGDYDVQVLVIGAGPGGEDC 528 >gi|59003618|gb|AAW83618.1| gag protein [Human immunodeficiency virus 1] Length = 499 Score = 40.1 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 14/142 (9%), Positives = 32/142 (22%), Gaps = 13/142 (9%) Query: 105 TEGQDLMIIGYTPSD--SDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG 162 +++ G P + ++ G G+ + +++ + + + P Sbjct: 324 NPDCKIILKGLGPGATLEEMMTACQGVGGPGHKARVLAEAMSQANSTNIMMQRGNFRGPK 383 Query: 163 NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---------FFNNDAQKTYQNL 213 + I R K G + F Sbjct: 384 RTVKCFNCGKEG--HIARNCRAPRKKGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRP 441 Query: 214 GKWSNLCTPHSIIPTLATVHPQ 235 G + + P T P Sbjct: 442 GNFLQNRPEPTAPPVEPTAPPA 463 >gi|254704177|ref|ZP_05166005.1| hypothetical protein Bsuib36_09669 [Brucella suis bv. 3 str. 686] Length = 99 Score = 40.1 bits (92), Expect = 0.29, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 33/94 (35%), Gaps = 11/94 (11%) Query: 77 LHELKSLLRSFHDC---HL----CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129 L EL+ +++ C L + +C + I G P + + PF+ Sbjct: 7 LDELRHSIQACRLCRDTPLFPPPLPHEPNPVCIISDT-ARIAICGQAPGIRVHNTSLPFN 65 Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPWHP 160 +G+ L + L + ++ I + P Sbjct: 66 DPSGDRLRQWLGVTREEFYDASRFAIVPMGFCFP 99 >gi|227511174|ref|ZP_03941223.1| uracil-DNA glycosylase [Lactobacillus buchneri ATCC 11577] gi|227523380|ref|ZP_03953429.1| uracil-DNA glycosylase [Lactobacillus hilgardii ATCC 8290] gi|227085656|gb|EEI20968.1| uracil-DNA glycosylase [Lactobacillus buchneri ATCC 11577] gi|227089486|gb|EEI24798.1| uracil-DNA glycosylase [Lactobacillus hilgardii ATCC 8290] Length = 193 Score = 40.1 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 43/136 (31%), Gaps = 9/136 (6%) Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGN 163 ++II PS S ++ +G+ L + + +I + + ++P Sbjct: 34 NAKILIISQAPSRKAQESMVFWNDPSGDRLRDWMGIDKDRFYHSGKIAVMPLDFYYPGKG 93 Query: 164 RNL--SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221 + + + + ++ L IG + ++ + QK + Sbjct: 94 IHGDLPPRKGFADKWHQPLLSLMPHVQLKLLIGQYAQKYYLQKNRQKNLTETVRCFEDYL 153 Query: 222 PHSIIPTLATVHPQEL 237 P VHP L Sbjct: 154 PEY----FPLVHPSPL 165 >gi|209547966|ref|YP_002279883.1| alpha amylase catalytic region [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533722|gb|ACI53657.1| alpha amylase catalytic region [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 550 Score = 40.1 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 18/136 (13%), Positives = 48/136 (35%), Gaps = 12/136 (8%) Query: 1 MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYES-QRKEKSIDSAIQPI 53 +TS+ ++ Q+++L + F+ + GV + N ++ R ++ + Sbjct: 175 LTSQPDMNLHNPEVQDRLLDVVRFWLNRGVDGFRLDTINFYFHDPLLRDNPALAPERRNA 234 Query: 54 TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113 + ++ Q+ + +L LK + +++ + + L I+ Sbjct: 235 STAPAVNPYNFQEHVYDKNRPENLAFLKRFRAVLEEFP----AIAAVGEVGDSQRGLEIV 290 Query: 114 GY-TPSDSDNISGKPF 128 G T + F Sbjct: 291 GEYTSGNDKMHMCYAF 306 >gi|1750280|gb|AAB41628.1| dihydrolipoyl transacetylase and lipoamide dehydrogenase of the pyruvate dehydrogenase complex [Acidithiobacillus ferrooxidans] Length = 978 Score = 40.1 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 12/91 (13%), Positives = 26/91 (28%), Gaps = 3/91 (3%) Query: 32 NNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCH 91 + +I + I + + A+ A L++LK + + Sbjct: 439 IAQFDAIVTPGTAAIIAIAGNGPEGMPITITADHRVVNGAEAALFLNDLKQAIEHPEN-- 496 Query: 92 LCSTSLSTICATQTEGQDLMIIGYTPSDSDN 122 S + +++IG P D Sbjct: 497 -WLGSGGPVIPEGDYDVQVLVIGAGPGGEDC 526 >gi|255022240|ref|ZP_05294235.1| Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex / Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex [Acidithiobacillus caldus ATCC 51756] gi|254968331|gb|EET25898.1| Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex / Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex [Acidithiobacillus caldus ATCC 51756] Length = 727 Score = 40.1 bits (92), Expect = 0.33, Method: Composition-based stats. Identities = 11/91 (12%), Positives = 27/91 (29%), Gaps = 3/91 (3%) Query: 32 NNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCH 91 ++ +I + + + + + A A L +LK+L+ + Sbjct: 185 VSQFDAIVTPGTAAILAVAATGPDGMPVTISADHRVVNGADAAAFLKDLKALVEAPQS-- 242 Query: 92 LCSTSLSTICATQTEGQDLMIIGYTPSDSDN 122 + +++IG P D Sbjct: 243 -WLGASGPAIPEGNYDVQVLVIGAGPGGEDC 272 >gi|85708804|ref|ZP_01039870.1| hypothetical protein NAP1_06175 [Erythrobacter sp. NAP1] gi|85690338|gb|EAQ30341.1| hypothetical protein NAP1_06175 [Erythrobacter sp. NAP1] Length = 141 Score = 40.1 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 21/139 (15%), Positives = 54/139 (38%), Gaps = 7/139 (5%) Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170 M++ P + S + +G G +LD++L ++ + ++++ P + + I Sbjct: 1 MVLVLDP--EERDSDRLLNGTCGQLLDRILTAMRLPEDAVYLASALP-RHTPMADAATIA 57 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230 + + I L++PK L+ G+ + ++ K + +P + Sbjct: 58 AAGMDAVTLHHISLVAPKRLIAFGS-SIPPLLGHELTKDVS---SLREINHEKRSVPLMV 113 Query: 231 TVHPQELIQYPLIKKNTWH 249 + ++ P +K W Sbjct: 114 SEGLDAMMAMPRLKARFWR 132 >gi|194768296|ref|XP_001966248.1| GF22816 [Drosophila ananassae] gi|190618550|gb|EDV34074.1| GF22816 [Drosophila ananassae] Length = 1192 Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 63/178 (35%), Gaps = 20/178 (11%) Query: 97 LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML-------------QSI 143 TI + D++I+G P G ++G GN K L + Sbjct: 654 KRTIPDHLCDNLDIVIVGINPGLFAAYKGHHYAGP-GNHFWKCLYLAGLTQEQMNADEDH 712 Query: 144 EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 +++R I + + G+ +L+ E++ I++ +++ PK+ +F G F Sbjct: 713 KLLRQGIGFTNMVSRATKGSADLTRKEIKEGSRILLEKLQRFRPKVAVFNGKLIFEVFSG 772 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHP--QELIQYPLIKKNTWHALITLKKALK 259 + G+ + I + + +L + K + AL + L Sbjct: 773 KKEFHFGRQPGRV---DGTDTYIWVMPSSSARCAQLPRA-ADKVPFYAALKKFRDFLN 826 >gi|190890403|ref|YP_001976945.1| alpha-glucosidase [Rhizobium etli CIAT 652] gi|190695682|gb|ACE89767.1| alpha-glucosidase protein [Rhizobium etli CIAT 652] Length = 550 Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 18/136 (13%), Positives = 48/136 (35%), Gaps = 12/136 (8%) Query: 1 MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYES-QRKEKSIDSAIQPI 53 +TS+ ++ Q+++L + F+ + GV + N ++ R ++ + Sbjct: 175 LTSQPDMNLHNPEVQDRLLDVVRFWLNRGVDGFRLDTINFYFHDPLLRDNPALAPERRNA 234 Query: 54 TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113 + ++ Q+ + +L LK + +++ + + L I+ Sbjct: 235 STAPAVNPYNFQEHIYDKNRPENLAFLKRFRAVLEEFP----AIAAVGEVGDSQRGLEIV 290 Query: 114 GY-TPSDSDNISGKPF 128 G T + F Sbjct: 291 GEYTSGNDKMHMCYAF 306 >gi|222084905|ref|YP_002543434.1| alpha-glucosidase protein [Agrobacterium radiobacter K84] gi|221722353|gb|ACM25509.1| alpha-glucosidase protein [Agrobacterium radiobacter K84] Length = 550 Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 51/136 (37%), Gaps = 12/136 (8%) Query: 1 MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYESQ-RKEKSIDSAIQPI 53 +TS+ ++ Q+++L + F+ D GV + N ++ + R +++ A + Sbjct: 175 LTSQPDMNLHNPEVQDRLLNVVRFWLDRGVDGFRLDTINFYFHDRELRDNPALEPARRNA 234 Query: 54 TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113 + ++ Q+ + +L LK + +++ + + L I+ Sbjct: 235 STAPAVNPYNFQEHLYDKNRPENLAFLKRFRAVLDEYP----AIAAVGEVGDSQRGLEIV 290 Query: 114 GY-TPSDSDNISGKPF 128 G T D F Sbjct: 291 GEYTAGDDKMHMCYAF 306 >gi|86356350|ref|YP_468242.1| alpha-glucosidase protein [Rhizobium etli CFN 42] gi|86280452|gb|ABC89515.1| alpha-glucosidase protein [Rhizobium etli CFN 42] Length = 550 Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 18/136 (13%), Positives = 48/136 (35%), Gaps = 12/136 (8%) Query: 1 MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYES-QRKEKSIDSAIQPI 53 +TS+ ++ Q+++L + F+ + GV + N ++ R ++ + Sbjct: 175 LTSQPDMNLHNPEVQDRLLDVVRFWLNRGVDGFRLDTINFYFHDPLLRDNPALAPERRNA 234 Query: 54 TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113 + ++ Q+ + +L LK + +++ + + L I+ Sbjct: 235 STAPAVNPYNFQEHIYDKNRPENLAFLKRFRAVLEEFP----AIAAVGEVGDSQRGLEIV 290 Query: 114 GY-TPSDSDNISGKPF 128 G T + F Sbjct: 291 GEYTSGNDKMHMCYAF 306 >gi|148244565|ref|YP_001219259.1| hypothetical protein COSY_0416 [Candidatus Vesicomyosocius okutanii HA] gi|146326392|dbj|BAF61535.1| hypothetical protein [Candidatus Vesicomyosocius okutanii HA] Length = 139 Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 15/29 (51%) Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALK 259 HP ++ +K+ TW L +K+ LK Sbjct: 111 IHHPSNILTNDKLKRETWETLKKVKQCLK 139 >gi|309270629|ref|XP_906829.2| PREDICTED: G/T mismatch-specific thymine DNA glycosylase-like isoform 5 [Mus musculus] Length = 421 Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 43/132 (32%), Gaps = 7/132 (5%) Query: 29 DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHEL------KS 82 D P E E+ ++ K A +P + +++ + ++ K Sbjct: 58 DAPVQEPAPEAPKRRKRKPRAAEPQEPVEPKKPATSKKSGKSTKSKEKQEKITDAFKVKR 117 Query: 83 LLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142 + F+ T+ T D++IIG P G + G GN K L Sbjct: 118 KVDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGP-GNHFWKCLFM 176 Query: 143 IEIMRTQIHISM 154 + Q++ Sbjct: 177 SGLSEVQLNHMN 188 >gi|218682681|ref|ZP_03530282.1| alpha amylase catalytic region [Rhizobium etli CIAT 894] Length = 550 Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats. Identities = 18/136 (13%), Positives = 48/136 (35%), Gaps = 12/136 (8%) Query: 1 MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYES-QRKEKSIDSAIQPI 53 +TS+ ++ Q+++L + F+ + GV + N ++ R ++ + Sbjct: 175 LTSQPDMNLHNPEVQDRLLDVVRFWLNRGVDGFRLDTINFYFHDPLLRDNPALAPERRNA 234 Query: 54 TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113 + ++ Q+ + +L LK + +++ + + L I+ Sbjct: 235 STAPAVNPYNFQEHIYDKNRPENLAFLKRFRAVLEEFP----AIAAVGEVGDSQRGLEIV 290 Query: 114 GY-TPSDSDNISGKPF 128 G T + F Sbjct: 291 GEYTSGNDKMHMCYAF 306 >gi|257061826|ref|YP_003139714.1| uracil-DNA glycosylase superfamily [Cyanothece sp. PCC 8802] gi|256591992|gb|ACV02879.1| Uracil-DNA glycosylase superfamily [Cyanothece sp. PCC 8802] Length = 225 Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats. Identities = 29/197 (14%), Positives = 61/197 (30%), Gaps = 34/197 (17%) Query: 93 CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI--------- 143 I + G + +G+P G G ++ + Sbjct: 31 KKDPTQPILYAGNLKSQICFFGRDLGRDEVHAGQPLIGAAGTLVRRGFYWAMHQKQAKTP 90 Query: 144 ---EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS-PKILLFIGNKTKN 199 + + ++ ++ P+ PPGN+ S E RP I + + + L+ +G + Sbjct: 91 AELQTVCDRLLLTNTVPYKPPGNKAYSVAVKERFRPFIEQLLVIHWQGDQLITLGTEAFK 150 Query: 200 FF--------FNNDAQKTYQNLGKWS-------NLCTPH-SIIPTLATVHPQELIQYPLI 243 +F + Q++ + K + H I + HP PL Sbjct: 151 WFSPYGKKGELDQFFQRSDRYSAKLAVTLEATDEFQLRHQRQIMLMPLPHPS-----PLN 205 Query: 244 KKNTWHALITLKKALKN 260 ++ L++ L Sbjct: 206 QRYYGQFPQMLQQRLNE 222 >gi|301065707|ref|YP_003787730.1| uracil-DNA glycosylase [Lactobacillus casei str. Zhang] gi|300438114|gb|ADK17880.1| Uracil-DNA glycosylase [Lactobacillus casei str. Zhang] Length = 193 Score = 39.7 bits (91), Expect = 0.45, Method: Composition-based stats. Identities = 13/138 (9%), Positives = 39/138 (28%), Gaps = 11/138 (7%) Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRN 165 ++I P + ++ +G+ L + + + P Sbjct: 33 PEATILIASQAPGRKAQTTKTYWNDPSGDRLRTWMGVTKDQFYHSGKIAVLPLDFYYPGK 92 Query: 166 LSNIEMEICRPIIMR-----QIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNL 219 + ++ + + + ++ + IG + ++ +KT + + Sbjct: 93 GKSGDLPPRKDFAAKWHPSLLALMPKIQLTIVIGAYAQKYYLGKHREKTLTATVKNFRTY 152 Query: 220 CTPHSIIPTLATVHPQEL 237 + VHP L Sbjct: 153 LPDY-----FPIVHPSPL 165 >gi|218248768|ref|YP_002374139.1| Uracil-DNA glycosylase superfamily [Cyanothece sp. PCC 8801] gi|218169246|gb|ACK67983.1| Uracil-DNA glycosylase superfamily [Cyanothece sp. PCC 8801] Length = 225 Score = 39.3 bits (90), Expect = 0.47, Method: Composition-based stats. Identities = 29/197 (14%), Positives = 61/197 (30%), Gaps = 34/197 (17%) Query: 93 CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI--------- 143 I + G + +G+P G G ++ + Sbjct: 31 KKDPTQPILYAGNLNSQICFFGRDLGRDEVHAGQPLIGAAGTLVRRGFYWAMHQKQAKTP 90 Query: 144 ---EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS-PKILLFIGNKTKN 199 + + ++ ++ P+ PPGN+ S E RP I + + + L+ +G + Sbjct: 91 AELQTVCDRLLLTNTVPYKPPGNKAYSVAVKERFRPFIEQLLVIHWQGDQLITLGTEAFK 150 Query: 200 FF--------FNNDAQKTYQNLGKWS-------NLCTPH-SIIPTLATVHPQELIQYPLI 243 +F + Q++ + K + H I + HP PL Sbjct: 151 WFSPYGKKGELDQFFQRSDRYSAKLAVTLEATDEFQLRHQRQIMLMPLPHPS-----PLN 205 Query: 244 KKNTWHALITLKKALKN 260 ++ L++ L Sbjct: 206 QRYYGQFPQMLQQRLNE 222 >gi|239629589|ref|ZP_04672620.1| uracil-DNA glycosylase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239528275|gb|EEQ67276.1| uracil-DNA glycosylase [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 193 Score = 39.3 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 13/138 (9%), Positives = 39/138 (28%), Gaps = 11/138 (7%) Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRN 165 ++I P + ++ +G+ L + + + P Sbjct: 33 PEATILIASQAPGRKAQTTKTYWNDPSGDRLRTWMGVTKDQFYHSGKIAVLPLDFYYPGK 92 Query: 166 LSNIEMEICRPIIMR-----QIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNL 219 + ++ + + + ++ + IG + ++ +KT + + Sbjct: 93 GKSGDLPPRKDFAAKWHPSLLALMPKIQLTIVIGAYAQKYYLGKHREKTLTATVKNFRTY 152 Query: 220 CTPHSIIPTLATVHPQEL 237 + VHP L Sbjct: 153 LPDY-----FPIVHPSPL 165 >gi|15964451|ref|NP_384804.1| alpha-glucosidase protein [Sinorhizobium meliloti 1021] gi|307315813|ref|ZP_07595325.1| alpha amylase catalytic region [Sinorhizobium meliloti BL225C] gi|307318948|ref|ZP_07598379.1| alpha amylase catalytic region [Sinorhizobium meliloti AK83] gi|17380497|sp|Q9Z3R8|AGLA_RHIME RecName: Full=Probable alpha-glucosidase gi|15073628|emb|CAC45270.1| Probable alpha-glucosidase [Sinorhizobium meliloti 1021] gi|306895362|gb|EFN26117.1| alpha amylase catalytic region [Sinorhizobium meliloti AK83] gi|306898540|gb|EFN29215.1| alpha amylase catalytic region [Sinorhizobium meliloti BL225C] Length = 551 Score = 39.3 bits (90), Expect = 0.49, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 46/136 (33%), Gaps = 12/136 (8%) Query: 1 MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYESQ-RKEKSIDSAIQPI 53 +TS+ L+ QE +L + F+ + GV + N ++ + R ++ + Sbjct: 177 LTSQPDLNLHNPQVQEALLAVERFWLERGVDGFRLDTINFYFHDRELRDNPALVPERRNA 236 Query: 54 TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113 + ++ Q+ + +L LK + +++ + + L I Sbjct: 237 STAPAVNPYNYQEHIYDKNRPENLEFLKRFRAVMDEFP----AIAAVGEVGDSQRGLEIA 292 Query: 114 GY-TPSDSDNISGKPF 128 G T F Sbjct: 293 GEYTSGGDKVHMCYAF 308 >gi|296532703|ref|ZP_06895392.1| NLP/P60 family protein [Roseomonas cervicalis ATCC 49957] gi|296266971|gb|EFH12907.1| NLP/P60 family protein [Roseomonas cervicalis ATCC 49957] Length = 199 Score = 39.3 bits (90), Expect = 0.50, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 47/169 (27%), Gaps = 12/169 (7%) Query: 75 CSLHELKSLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133 +L L + R C I + L+II P +++G P++ K G Sbjct: 5 ENLDALAAEARRCTLCAPHLPLGPKPIF-RVSPAARLLIISQAPGTQAHLTGIPWNDKAG 63 Query: 134 NMLDKM--LQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP---- 187 + L L + I + +P G + Q L P Sbjct: 64 DRLRDWLGLDRAGFYAETLAILPMGLCYP-GRLPRGGDAPPRPECAPLWQPRLGPPMTGI 122 Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236 ++ L +G ++LG H HP Sbjct: 123 RLTLLLGRHAIA---GRLGAAAARDLGATVQGFRAHLPERIFPLPHPSW 168 >gi|227534338|ref|ZP_03964387.1| uracil-DNA glycosylase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227188062|gb|EEI68129.1| uracil-DNA glycosylase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 193 Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats. Identities = 15/137 (10%), Positives = 38/137 (27%), Gaps = 9/137 (6%) Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRN 165 ++I P + ++ +G+ L + + + P Sbjct: 33 PEATILIASQAPGRKAQTTKTYWNDPSGDRLRTWMGVTKDQFYHSGKIAVLPLDFYYPGK 92 Query: 166 LSNIEMEICRPIIMR-----QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220 + ++ + + + ++ + IG + ++ +KT K Sbjct: 93 GKSGDLPPRKDFAAKWHPSLLALMPKIQLTIVIGAYAQKYYLGKHREKTLTATVKNFRAY 152 Query: 221 TPHSIIPTLATVHPQEL 237 P VHP L Sbjct: 153 LPDY----FPIVHPSPL 165 >gi|188582054|ref|YP_001925499.1| Uracil-DNA glycosylase superfamily [Methylobacterium populi BJ001] gi|179345552|gb|ACB80964.1| Uracil-DNA glycosylase superfamily [Methylobacterium populi BJ001] Length = 208 Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 45/190 (23%), Gaps = 16/190 (8%) Query: 50 IQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD 109 + + P + +A A + L++L + + G Sbjct: 2 PDSPDAPKSLRDPALLEARRAMADADHVKPLRALAQRIAG-ERGADVPDPDPLDGGVGAR 60 Query: 110 LMIIGYTPS----DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRN 165 L+++ TP + +S +G N+ L I R I PW Sbjct: 61 LLLLLETPGPSIGRTGFVSRDNATGTAANLFR-FLAEAGIARRDTLIWNAVPWVIHAPGA 119 Query: 166 LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI 225 + + + F A + Sbjct: 120 RNRAPRRSEATAAAPYFAPLLALLPRLAVVVPAGRFAQAAAAPLSRLR----------PD 169 Query: 226 IPTLATVHPQ 235 +P + HP Sbjct: 170 LPVIPIPHPS 179 >gi|4210904|gb|AAD12047.1| AglA [Sinorhizobium meliloti] Length = 549 Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 46/136 (33%), Gaps = 12/136 (8%) Query: 1 MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYESQ-RKEKSIDSAIQPI 53 +TS+ L+ QE +L + F+ + GV + N ++ + R ++ + Sbjct: 177 LTSQPDLNLHNPQVQEALLAVERFWLERGVDGFRLDTINFYFHDRELRDNPALVPERRNA 236 Query: 54 TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113 + ++ Q+ + +L LK + +++ + + L I Sbjct: 237 STAPAVNPYNYQEHIYDKNRPENLEFLKRFRAVMDEFP----AIAAVGEVGDSQRGLEIA 292 Query: 114 GY-TPSDSDNISGKPF 128 G T F Sbjct: 293 GEYTSGGDKVHMCYAF 308 >gi|219684779|ref|ZP_03539721.1| conserved hypothetical protein [Borrelia garinii PBr] gi|219685323|ref|ZP_03540142.1| conserved hypothetical protein [Borrelia garinii Far04] gi|219671724|gb|EED28779.1| conserved hypothetical protein [Borrelia garinii PBr] gi|219673096|gb|EED30116.1| conserved hypothetical protein [Borrelia garinii Far04] Length = 199 Score = 39.3 bits (90), Expect = 0.55, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 18/44 (40%) Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 + IP + T P I+ P +KK W L +K +K Sbjct: 154 VRGIELRFKGIPLVFTHLPINQIKNPELKKEIWQDLKIIKGIIK 197 >gi|330719178|ref|ZP_08313778.1| alpha-glucosidase [Leuconostoc fallax KCTC 3537] Length = 557 Score = 39.3 bits (90), Expect = 0.56, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 53/155 (34%), Gaps = 30/155 (19%) Query: 4 KRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPL 63 + + + ++ + F+ D G+ + N + E+ + +I + + Sbjct: 174 ENPVVRNEVWDLMKFWLDKGIDGFRMDVINLISKEAG------------LPDIPKPDNAI 221 Query: 64 VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123 A ++A L+E + S + + D+M +G P Sbjct: 222 YADATAVANGPR-LNEFLQEMNS------------KVLS----HYDVMTVGEMPGA-TPE 263 Query: 124 SGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158 + ++ +GN L+ + Q + T ++ W Sbjct: 264 KAQEYTNLSGNELNMVFQFEHVALTPNPDERLTKW 298 >gi|260221487|emb|CBA30099.1| hypothetical protein Csp_A15460 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 137 Score = 39.0 bits (89), Expect = 0.71, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 7/63 (11%) Query: 83 LLRSFHDCHLCSTSLSTICAT-----QTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 LL+ C LC + + ++++G P + SG PF +G+ L Sbjct: 15 LLQQVRACTLC--APNLALGVRPILQVHPAARILVVGQAPGIRVHNSGVPFDNASGDRLR 72 Query: 138 KML 140 + + Sbjct: 73 EWM 75 >gi|228952008|ref|ZP_04114103.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228807540|gb|EEM54064.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 48 Score = 38.6 bits (88), Expect = 0.79, Method: Composition-based stats. Identities = 5/39 (12%), Positives = 9/39 (23%) Query: 218 NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256 T HP + + + LK+ Sbjct: 5 EFTWSEKEYHVFPTFHPASIFYNRSLLELIHEDFEKLKR 43 >gi|307331299|ref|ZP_07610421.1| Uracil-DNA glycosylase superfamily [Streptomyces violaceusniger Tu 4113] gi|306883040|gb|EFN14104.1| Uracil-DNA glycosylase superfamily [Streptomyces violaceusniger Tu 4113] Length = 180 Score = 38.6 bits (88), Expect = 0.87, Method: Composition-based stats. Identities = 21/153 (13%), Positives = 41/153 (26%), Gaps = 19/153 (12%) Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM---- 146 L + + +G ++ G P +G F+ + GN L + Sbjct: 5 ELEAARDRLVPDVVGDGLRVLFCGINPGLMTAATGHHFA-RPGNRFWPALHASGFTPRRL 63 Query: 147 ---------RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197 R + I+ + LS+ E I+ ++ + P+ L G Sbjct: 64 DPSEQAELVRHGLGITNVVARASARADELSDEEYREGGRILEEKVLRLRPRWLAVAGVTA 123 Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230 F + + I L Sbjct: 124 YRAAFGDKKATIGP-----QTRTIGDTRIWALP 151 >gi|3915099|sp|P56581|TDG_MOUSE RecName: Full=G/T mismatch-specific thymine DNA glycosylase; AltName: Full=C-JUN leucine zipper interactive protein JZA-3; AltName: Full=Thymine-DNA glycosylase gi|3420293|gb|AAC31900.1| T:G mismatch-specific thymine-DNA glycosylase TDGb isoform [Mus musculus] gi|26354735|dbj|BAC40994.1| unnamed protein product [Mus musculus] gi|148673050|gb|EDL04997.1| mCG122416 [Mus musculus] Length = 397 Score = 38.6 bits (88), Expect = 0.88, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 43/128 (33%), Gaps = 3/128 (2%) Query: 24 VYWVFDEPNNEATYESQRKEKSIDS--AIQPITNIRHIHSPLVQQADSIAQKACSLHELK 81 EP EA +RK ++ + ++P S ++ +K ++K Sbjct: 33 ADAPVQEPAPEAPKRRKRKPRAAEPQEPVEPKKPATSKKSGKSTKSKEKQEKITDAFKVK 92 Query: 82 SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 + F+ T+ T D++IIG P G + G GN K L Sbjct: 93 RKVDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGP-GNHFWKCLF 151 Query: 142 SIEIMRTQ 149 + Q Sbjct: 152 MSGLSEVQ 159 >gi|37589917|gb|AAH10315.2| Thymine DNA glycosylase [Mus musculus] gi|74146747|dbj|BAE41355.1| unnamed protein product [Mus musculus] Length = 421 Score = 38.6 bits (88), Expect = 0.88, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 43/128 (33%), Gaps = 3/128 (2%) Query: 24 VYWVFDEPNNEATYESQRKEKSIDS--AIQPITNIRHIHSPLVQQADSIAQKACSLHELK 81 EP EA +RK ++ + ++P S ++ +K ++K Sbjct: 57 ADAPVQEPAPEAPKRRKRKPRAAEPQEPVEPKKPATSKKSGKSTKSKEKQEKITDAFKVK 116 Query: 82 SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 + F+ T+ T D++IIG P G + G GN K L Sbjct: 117 RKVDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGP-GNHFWKCLF 175 Query: 142 SIEIMRTQ 149 + Q Sbjct: 176 MSGLSEVQ 183 >gi|50509430|dbj|BAD31049.1| hypothetical protein [Oryza sativa Japonica Group] Length = 826 Score = 38.6 bits (88), Expect = 0.91, Method: Composition-based stats. Identities = 12/91 (13%), Positives = 28/91 (30%), Gaps = 12/91 (13%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSL-----------HE 79 P++E ++ S + P +R P A + L E Sbjct: 220 PDDELDAANKEVAMSQSAPPSPAP-MRAGVEPPTNIAGINGSRPTQLVVRTVRGRRAMEE 278 Query: 80 LKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 L +++ C L + + + + + + Sbjct: 279 LVAMMAHCRRCELAAVADRHVVSRFSHKGRI 309 >gi|148689417|gb|EDL21364.1| mCG118034, isoform CRA_a [Mus musculus] gi|148689418|gb|EDL21365.1| mCG118034, isoform CRA_a [Mus musculus] Length = 397 Score = 38.6 bits (88), Expect = 0.95, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 7/127 (5%) Query: 29 DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHEL------KS 82 D P E E+ ++ K A +P + +++ + ++ K Sbjct: 34 DAPVQEPAPEAPKRRKRKPRAAEPQEPVEPKKPATSKKSGKSTKSKEKQEKITDAFKVKR 93 Query: 83 LLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142 + F+ T+ T D++IIG P G + G GN K L Sbjct: 94 KVDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGP-GNHFWKCLFM 152 Query: 143 IEIMRTQ 149 + Q Sbjct: 153 SGLSEVQ 159 >gi|218508552|ref|ZP_03506430.1| alpha-glucosidase protein [Rhizobium etli Brasil 5] Length = 282 Score = 38.6 bits (88), Expect = 0.95, Method: Composition-based stats. Identities = 18/136 (13%), Positives = 48/136 (35%), Gaps = 12/136 (8%) Query: 1 MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYES-QRKEKSIDSAIQPI 53 +TS+ ++ Q+++L + F+ + GV + N ++ R ++ + Sbjct: 35 LTSQPDMNLHNPEVQDRLLDVVRFWLNRGVDGFRLDTINFYFHDPLLRDNPALAPERRNA 94 Query: 54 TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113 + ++ Q+ + +L LK + +++ + + L I+ Sbjct: 95 STAPAVNPYNFQEHIYDKNRPENLAFLKRFRAVLEEFP----AIAAVGEVGDSQRGLEIV 150 Query: 114 GY-TPSDSDNISGKPF 128 G T + F Sbjct: 151 GEYTSGNDKMHMCYAF 166 >gi|308486765|ref|XP_003105579.1| hypothetical protein CRE_22354 [Caenorhabditis remanei] gi|308255545|gb|EFO99497.1| hypothetical protein CRE_22354 [Caenorhabditis remanei] Length = 341 Score = 38.6 bits (88), Expect = 0.97, Method: Composition-based stats. Identities = 24/184 (13%), Positives = 46/184 (25%), Gaps = 23/184 (12%) Query: 97 LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT-------GNMLDKMLQSIEIMRTQ 149 + + +L +IG+ +++ + F K G L L + Sbjct: 162 SNFVFGMGHNAGELQLIGFNHAENAITHDEGFCDKFKRIPRGTGYYLSANLHRYCHGSPR 221 Query: 150 IHISMISPWHPPGNRNLSNIEMEIC-----RPIIMRQIELISPKILLFIGNKTKNFFFNN 204 + + M +M Q+++ + Sbjct: 222 DDLESLVYCLLEMLGIQLPWTMMREPQSFVDHQMMFQMKMGNTSGAGLCEFVPIQEMLGM 281 Query: 205 DAQKTYQNLGKWSNLCTPHSIIPTLAT--VHPQELIQYP--LIKKNTWH--ALITLKKA- 257 T Q + + S A V P P K W L LK+ Sbjct: 282 CRALTCQEKPNYDEVKQLFSCPYVRAMREVKPSF----PYDAWKIEKWEESDLEILKRFD 337 Query: 258 LKNL 261 ++ L Sbjct: 338 IREL 341 >gi|325291982|ref|YP_004277846.1| alpha-glucosidase [Agrobacterium sp. H13-3] gi|325059835|gb|ADY63526.1| alpha-glucosidase [Agrobacterium sp. H13-3] Length = 561 Score = 38.6 bits (88), Expect = 0.98, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 12/136 (8%) Query: 1 MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYE-SQRKEKSIDSAIQPI 53 +TS+ L+ QE++L I F+ GV + N ++ R ++ + Sbjct: 185 LTSQPDLNLHNPEVQEELLNITRFWLKRGVDGFRLDTINFYFHDLELRDNPALAPERRNA 244 Query: 54 TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113 + ++ Q+ + ++ LK + + + + L I+ Sbjct: 245 STAPAVNPYNFQEHLYDKNRPENIAFLKRFRAVLDEFPDIA----AVGEVGDSQRGLEIV 300 Query: 114 GY-TPSDSDNISGKPF 128 G T D F Sbjct: 301 GEYTSGDDKMQMCYAF 316 >gi|148689419|gb|EDL21366.1| mCG118034, isoform CRA_b [Mus musculus] Length = 421 Score = 38.6 bits (88), Expect = 0.98, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 7/127 (5%) Query: 29 DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHEL------KS 82 D P E E+ ++ K A +P + +++ + ++ K Sbjct: 58 DAPVQEPAPEAPKRRKRKPRAAEPQEPVEPKKPATSKKSGKSTKSKEKQEKITDAFKVKR 117 Query: 83 LLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142 + F+ T+ T D++IIG P G + G GN K L Sbjct: 118 KVDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGP-GNHFWKCLFM 176 Query: 143 IEIMRTQ 149 + Q Sbjct: 177 SGLSEVQ 183 >gi|54024805|ref|YP_119047.1| putative DNA glycosylase [Nocardia farcinica IFM 10152] gi|54016313|dbj|BAD57683.1| putative DNA glycosylase [Nocardia farcinica IFM 10152] Length = 184 Score = 38.6 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 21/153 (13%), Positives = 40/153 (26%), Gaps = 19/153 (12%) Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150 L + + +TI ++ G P +G F+ + GN L Sbjct: 12 DLAAAAGTTIPDVVGPDLRVLFCGINPGLWSGATGHHFA-RPGNRFWPALFRSGFTPRLF 70 Query: 151 H-------------ISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197 I+ + P L+ E+ + ++ PK L +G Sbjct: 71 RPDEQEELLALGLGITNVVPRTTAKADELTTAELREGGRALTERVRRYRPKALAVLGIGA 130 Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230 F + + + I L Sbjct: 131 YRTAFGRPRTTVGR-----QDETIADTEIWVLP 158 >gi|166706901|ref|NP_035691.2| G/T mismatch-specific thymine DNA glycosylase isoform 1 [Mus musculus] gi|74211041|dbj|BAE37621.1| unnamed protein product [Mus musculus] Length = 397 Score = 38.2 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 7/127 (5%) Query: 29 DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHEL------KS 82 D P E E+ ++ K A +P + +++ + ++ K Sbjct: 34 DAPVQEPAPEAPKRRKRKPRAAEPQEPVEPKKPATSKKSGKSTKSKEKQEKITDAFKVKR 93 Query: 83 LLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142 + F+ T+ T D++IIG P G + G GN K L Sbjct: 94 KVDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGP-GNHFWKCLFM 152 Query: 143 IEIMRTQ 149 + Q Sbjct: 153 SGLSEVQ 159 >gi|166706899|ref|NP_766140.2| G/T mismatch-specific thymine DNA glycosylase isoform 2 [Mus musculus] gi|55250067|gb|AAH85471.1| Thymine DNA glycosylase [Mus musculus] gi|74218991|dbj|BAE37857.1| unnamed protein product [Mus musculus] Length = 421 Score = 38.2 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 7/127 (5%) Query: 29 DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHEL------KS 82 D P E E+ ++ K A +P + +++ + ++ K Sbjct: 58 DAPVQEPAPEAPKRRKRKPRAAEPQEPVEPKKPATSKKSGKSTKSKEKQEKITDAFKVKR 117 Query: 83 LLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142 + F+ T+ T D++IIG P G + G GN K L Sbjct: 118 KVDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGP-GNHFWKCLFM 176 Query: 143 IEIMRTQ 149 + Q Sbjct: 177 SGLSEVQ 183 >gi|26343819|dbj|BAC35566.1| unnamed protein product [Mus musculus] Length = 421 Score = 38.2 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 7/127 (5%) Query: 29 DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHEL------KS 82 D P E E+ ++ K A +P + +++ + ++ K Sbjct: 58 DAPVQEPAPEAPKRRKRKPRAAEPQEPVEPKKPATSKKSGKSTKSKEKQEKITDAFKVKR 117 Query: 83 LLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142 + F+ T+ T D++IIG P G + G GN K L Sbjct: 118 KVDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGP-GNHFWKCLFM 176 Query: 143 IEIMRTQ 149 + Q Sbjct: 177 SGLSEVQ 183 >gi|55250859|gb|AAH85470.1| Thymine DNA glycosylase [Mus musculus] Length = 421 Score = 38.2 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 7/127 (5%) Query: 29 DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHEL------KS 82 D P E E+ ++ K A +P + +++ + ++ K Sbjct: 58 DAPVQEPAPEAPKRRKRKPRAAEPQEPVEPKKPATSKKSGKSTKSKEKQEKITDAFKVKR 117 Query: 83 LLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142 + F+ T+ T D++IIG P G + G GN K L Sbjct: 118 KVDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGP-GNHFWKCLFM 176 Query: 143 IEIMRTQ 149 + Q Sbjct: 177 SGLSEVQ 183 >gi|219130271|ref|XP_002185292.1| probable cell surface glycoprotein [Phaeodactylum tricornutum CCAP 1055/1] gi|217403207|gb|EEC43161.1| probable cell surface glycoprotein [Phaeodactylum tricornutum CCAP 1055/1] Length = 623 Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 7/56 (12%), Positives = 12/56 (21%) Query: 24 VYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHE 79 V D P + T + + P +P + E Sbjct: 308 VDAPVDAPTDAPTPLEPTPAEPTPAEPTPAEPTPAEPTPAEPTPAEPTPAEPTPAE 363 >gi|168701246|ref|ZP_02733523.1| putative DNA glycosylase [Gemmata obscuriglobus UQM 2246] Length = 184 Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 35/143 (24%), Gaps = 21/143 (14%) Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRT-- 148 L + T+ G ++ G P G F G+ GN L Sbjct: 12 ELRAAQNKTVPDVIGPGLKVLFCGINPGLYTAAIGHHF-GRPGNRFWPTLHRAGFTPRLL 70 Query: 149 -----------QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197 I+ + G L+N E + ++ +PK L +G Sbjct: 71 DPSEELELLPLGYGITNVVARATVGADELTNDEYVTGGAALREKVLAFAPKYLAVLGIGA 130 Query: 198 K-------NFFFNNDAQKTYQNL 213 + Q Sbjct: 131 YRVGFARPKAVIGLQPEPIGQTR 153 >gi|115472235|ref|NP_001059716.1| Os07g0499800 [Oryza sativa Japonica Group] gi|113611252|dbj|BAF21630.1| Os07g0499800 [Oryza sativa Japonica Group] Length = 752 Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 12/91 (13%), Positives = 28/91 (30%), Gaps = 12/91 (13%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSL-----------HE 79 P++E ++ S + P +R P A + L E Sbjct: 220 PDDELDAANKEVAMSQSAPPSPAP-MRAGVEPPTNIAGINGSRPTQLVVRTVRGRRAMEE 278 Query: 80 LKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 L +++ C L + + + + + + Sbjct: 279 LVAMMAHCRRCELAAVADRHVVSRFSHKGRI 309 >gi|159184380|ref|NP_353620.2| alpha-glucosidase [Agrobacterium tumefaciens str. C58] gi|159139693|gb|AAK86405.2| alpha-glucosidase [Agrobacterium tumefaciens str. C58] Length = 551 Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 12/136 (8%) Query: 1 MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYE-SQRKEKSIDSAIQPI 53 +TS+ L+ QE++L I F+ GV + N ++ R ++ + Sbjct: 175 LTSQPDLNLHNPEVQEELLNITRFWLKRGVDGFRLDTINFYFHDLELRDNPALAPERRNA 234 Query: 54 TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113 + ++ Q+ + ++ LK + + + + L I+ Sbjct: 235 STAPAVNPYNFQEHLYDKNRPENIAFLKRFRAVLDEFPDIA----AVGEVGDSQRGLEIV 290 Query: 114 GY-TPSDSDNISGKPF 128 G T D F Sbjct: 291 GEYTSGDDKMQMCYAF 306 >gi|227820894|ref|YP_002824864.1| alpha-glucosidase [Sinorhizobium fredii NGR234] gi|227339893|gb|ACP24111.1| alpha-glucosidase [Sinorhizobium fredii NGR234] Length = 551 Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 12/136 (8%) Query: 1 MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYESQ-RKEKSIDSAIQPI 53 +T++ L+ QE +L + F+ + GV + N ++ + R ++ + Sbjct: 177 LTAQPDLNLHNRQVQEALLAVERFWLERGVDGFRLDTINFYFHDRELRDNPALAPERRNA 236 Query: 54 TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113 + ++ Q+ + +L LK + +++ + + L I Sbjct: 237 STAPAVNPYNYQEHIYDKNRPENLEFLKRFRAVMDEFP----AIAAVGEVGDSQRGLEIA 292 Query: 114 GY-TPSDSDNISGKPF 128 G T F Sbjct: 293 GEYTSGGDKVQMCYAF 308 >gi|309263335|ref|XP_003086024.1| PREDICTED: G/T mismatch-specific thymine DNA glycosylase-like [Mus musculus] Length = 391 Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 7/127 (5%) Query: 29 DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHEL------KS 82 D P E E+ ++ K A +P + +++ + ++ K Sbjct: 58 DAPVQEPAPEAPKRRKRKPRAAEPQEPVEPKKPATSKKSGKSTKSKEKQEKITDAFKVKR 117 Query: 83 LLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142 + F+ T+ T D++IIG P G + G GN K L Sbjct: 118 KVDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGP-GNHFWKCLFM 176 Query: 143 IEIMRTQ 149 + Q Sbjct: 177 SGLSEVQ 183 >gi|261884746|ref|ZP_06008785.1| uracil-DNA glycosylase superfamily protein [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 182 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 5/35 (14%), Positives = 13/35 (37%) Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD 109 +L L+ +++ + C LC + + Sbjct: 37 SNLKRLEEAIKNCNLCELCKSRNKACLGGKEPSFK 71 >gi|254561851|ref|YP_003068946.1| hypothetical protein METDI3446 [Methylobacterium extorquens DM4] gi|254269129|emb|CAX25092.1| conserved hypothetical protein; DNA glycosylase domain; Uracil DNA glycosylase superfamily [Methylobacterium extorquens DM4] Length = 208 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 24/195 (12%), Positives = 45/195 (23%), Gaps = 26/195 (13%) Query: 50 IQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD 109 + + P + A A + L++ R + Sbjct: 2 PASPDAPKSLRDPALLDARRAMADAPHVRPLRAFARVIAA-ERGAAVPDPDPLDGGVEAR 60 Query: 110 LMIIGYTPS----DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP---- 161 L+++ TP + +S +G GN+ L I R I PW Sbjct: 61 LLLLLETPGPAIGRTGFVSRDNPTGTAGNLFR-FLAEAGIARRNTLIWNAVPWVIHAPGA 119 Query: 162 -GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220 L +++ G + + + Sbjct: 120 LNRAPRRAEASAAAPYFAPLLALLPRLAVVVPAGRFAREA-----SAPLSALRPEL---- 170 Query: 221 TPHSIIPTLATVHPQ 235 P +A HP Sbjct: 171 ------PVVAIPHPS 179 >gi|162455733|ref|YP_001618100.1| protein kinase [Sorangium cellulosum 'So ce 56'] gi|161166315|emb|CAN97620.1| Protein kinase [Sorangium cellulosum 'So ce 56'] Length = 1384 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 33/103 (32%), Gaps = 4/103 (3%) Query: 13 LTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQ 72 L LF +GV D P E Q + +A+ P + R A Sbjct: 349 LGALLFELCAGVPPHHDVPMTELPLVVQTEAPRPLAALAPGADPRLAAVIERCLEIDPAD 408 Query: 73 KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115 + S EL+ L L + +++ + L++ Sbjct: 409 RFASGDELRDALEQL----LARSRHASVAPEGNPYRGLLVFDL 447 >gi|269123220|ref|YP_003305797.1| hypothetical protein Smon_0439 [Streptobacillus moniliformis DSM 12112] gi|268314546|gb|ACZ00920.1| hypothetical protein Smon_0439 [Streptobacillus moniliformis DSM 12112] Length = 188 Score = 38.2 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 19/165 (11%), Positives = 53/165 (32%), Gaps = 5/165 (3%) Query: 77 LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136 EL+ +R+ ++ + +M+I +G G ++ Sbjct: 2 WKELEYRIRTLSVYRNYKSNEEIMLGQGNRNSKIMLILPDIEKEALENGNILDSNNGKVI 61 Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196 + + + + ++I+ + +E +++ +I ++PK ++ IG + Sbjct: 62 QNIFKYLGLDIDNMYITSLYK-LDKNFIRYDVNTIEELLDVLITEIMYVNPKYIVTIGEE 120 Query: 197 TKNFF----FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237 N D +K N+ K + + + Sbjct: 121 VFNILISDALGKDNKKMNVNINKCVGNIYEYFEKVLIPIYDIPYI 165 >gi|218752959|ref|ZP_03531755.1| hypothetical protein MtubG1_05725 [Mycobacterium tuberculosis GM 1503] Length = 137 Score = 38.2 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 28/98 (28%), Gaps = 4/98 (4%) Query: 141 QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE--LISPKILLFIGNKTK 198 + + +I I+ PPGN + E C P + + + ++ +G Sbjct: 13 AADGLRANRIRITAPVRCAPPGNS-PTPAERLTCSPWLNAEWRLVSDHIRAIVALGGFAW 71 Query: 199 NFFFNNDAQKTY-QNLGKWSNLCTPHSIIPTLATVHPQ 235 + + + + L HP Sbjct: 72 QVALRLAGASGTPKPRFGHGVVTELGAGVRLLGCYHPS 109 >gi|148992707|ref|ZP_01822350.1| pneumococcal surface protein A [Streptococcus pneumoniae SP9-BS68] gi|147928433|gb|EDK79448.1| pneumococcal surface protein A [Streptococcus pneumoniae SP9-BS68] Length = 746 Score = 37.8 bits (86), Expect = 1.4, Method: Composition-based stats. Identities = 8/68 (11%), Positives = 16/68 (23%), Gaps = 3/68 (4%) Query: 8 SQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQA 67 +Q+++ + G +E A Q P + Sbjct: 419 TQKELDAALN---ELGPDGDEEELPARALQPEQPAPAPKPEQPTPAPKPEQPTPAPKPEQ 475 Query: 68 DSIAQKAC 75 + A K Sbjct: 476 PAPAPKPE 483 >gi|289761411|ref|ZP_06520789.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289708917|gb|EFD72933.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] Length = 133 Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 28/98 (28%), Gaps = 4/98 (4%) Query: 141 QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE--LISPKILLFIGNKTK 198 + + +I I+ PPGN + E C P + + + ++ +G Sbjct: 9 AADGLRANRIRITAPVRCAPPGNS-PTPAERLTCSPWLNAEWRLVSDHIRAIVALGGFAW 67 Query: 199 NFFFNNDAQKTY-QNLGKWSNLCTPHSIIPTLATVHPQ 235 + + + + L HP Sbjct: 68 QVALRLAGASGTPKPRFGHGVVTELGAGVRLLGCYHPS 105 >gi|126173819|ref|YP_001049968.1| phage SPO1 DNA polymerase domain-containing protein [Shewanella baltica OS155] gi|125997024|gb|ABN61099.1| phage SPO1 DNA polymerase domain protein [Shewanella baltica OS155] Length = 209 Score = 37.8 bits (86), Expect = 1.6, Method: Composition-based stats. Identities = 19/137 (13%), Positives = 41/137 (29%), Gaps = 19/137 (13%) Query: 82 SLLRSFHDCHLCST----SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 +LL + C LC + I + ++I G P + G PF +G L Sbjct: 3 ALLTKINACTLCQADLPLAPKPIL-QASSQARILIAGQAPGVKTHHKGIPFDDASGERLR 61 Query: 138 KML---QSIEIMRTQIHISMISPWHP---------PGNRNLSNIEMEICRPIIMRQIELI 185 L + I + P G++ ++ + Sbjct: 62 TWLNVTREQFYDPALFAIVPMGFCFPGSIEKNGKKQGDKPPRPECAATWHQALLA--LMP 119 Query: 186 SPKILLFIGNKTKNFFF 202 ++++ +G ++ Sbjct: 120 QIELMVILGQYAIDYHL 136 >gi|126728642|ref|ZP_01744457.1| alpha amylase protein [Sagittula stellata E-37] gi|126710572|gb|EBA09623.1| alpha amylase protein [Sagittula stellata E-37] Length = 544 Score = 37.8 bits (86), Expect = 1.6, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 44/125 (35%), Gaps = 17/125 (13%) Query: 1 MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPIT 54 +TS+ L+ Q+ +L + F+ D GV + N ++ + + + Sbjct: 170 LTSQPDLNFHCPEVQDALLEVVRFWLDRGVDGFRLDTINFYVHDQELRSNPPLPPERRDD 229 Query: 55 NIRHIHSPLVQQ----ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 +I +P Q + + + L ++LL + + + + L Sbjct: 230 SIAPKVNPYNHQEHIYSKNRPENIAFLERFRALLDEYEG-------KTAVGEVGDAQRGL 282 Query: 111 MIIGY 115 I+G Sbjct: 283 EIMGE 287 >gi|288958191|ref|YP_003448532.1| two-component hybrid sensor and regulator [Azospirillum sp. B510] gi|288910499|dbj|BAI71988.1| two-component hybrid sensor and regulator [Azospirillum sp. B510] Length = 1138 Score = 37.8 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 23/69 (33%), Gaps = 2/69 (2%) Query: 20 ADSGVYWVFDEPNN--EATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSL 77 ++G+ +P N + R + T SP + A+ A + Sbjct: 972 LEAGMDDYLSKPINARKLLDAIARFVPPVADTPADATGRTASPSPPAEAAEPAIINAEKI 1031 Query: 78 HELKSLLRS 86 EL+ L + Sbjct: 1032 EELRDALGA 1040 >gi|195385005|ref|XP_002051199.1| GJ14685 [Drosophila virilis] gi|194147656|gb|EDW63354.1| GJ14685 [Drosophila virilis] Length = 826 Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats. Identities = 30/251 (11%), Positives = 54/251 (21%), Gaps = 46/251 (18%) Query: 20 ADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHE 79 DS V P + S + A +++ +P + + Sbjct: 600 QDSLVEAAEVAPVEAVSLSSAKPTPVAPVAPAALSSTPPASAPAKSTRPAPIVRPAQ--- 656 Query: 80 LKSLLRSFHDCHLCSTSLSTICATQTEGQDLMI-IGYTPSDSDNISGKPFSGKTGNMLDK 138 DC C T T+ MI G P N DK Sbjct: 657 -----YQCEDCSKCFT---TV---GALRIHKMIHTGELPHKC-------------NYCDK 692 Query: 139 MLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTK 198 ++ +R +L E + R I + K N Sbjct: 693 RFRTPGQVRVHQRRHTGEKPFKCKVCSLDFTHRETLISHLSRHIGMKRYKCYGCDKNFVV 752 Query: 199 NFFFNNDAQKTYQNLGKW-SNLCTPHSIIPTL---ATV--HPQ---ELIQYPLIKKNTWH 249 + GK + + HP+ ++ Sbjct: 753 VSGLRAHRRLRPDTCGKVKFTARAHGPRVRVIRGEVVFESHPEHNGY-LRS--------E 803 Query: 250 ALITLKKALKN 260 + + + Sbjct: 804 DPLNIMSEINQ 814 >gi|221128051|ref|XP_002155481.1| PREDICTED: similar to CG14934 CG14934-PA [Hydra magnipapillata] Length = 550 Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats. Identities = 26/238 (10%), Positives = 56/238 (23%), Gaps = 37/238 (15%) Query: 1 MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPIT 54 +TS+ L+ Q+ +L F+ + GV + N +++Q ++ Sbjct: 169 LTSQPDLNFHNPEVQDALLATVKFWLELGVDGYRLDTANFYFHDAQLRDNPARGRPDGED 228 Query: 55 NIRHIHSP----LVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 + +P Q S + L L++LL E + Sbjct: 229 PAVNAVNPYGWQWHQHDKSQPENLAFLRRLRALL--------------------DEYPNT 268 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNM-LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI 169 ++G D ++ + + + T H Sbjct: 269 TMVGEIGDDDGLARVAEYTSGGDKLHMAYCFDLLGTAHTAAHFRSFVK-RFEEVAPGGWP 327 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227 + ++R A G +P Sbjct: 328 CWALSNHDVVRVAS-----RWGTTAPTASPALLRLGAALQMSLRGSPCIYQGDELGLP 380 >gi|260222661|emb|CBA32444.1| Probable alpha-glucosidase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 568 Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats. Identities = 26/238 (10%), Positives = 56/238 (23%), Gaps = 37/238 (15%) Query: 1 MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPIT 54 +TS+ L+ Q+ +L F+ + GV + N +++Q ++ Sbjct: 187 LTSQPDLNFHNPEVQDALLATVKFWLELGVDGYRLDTANFYFHDAQLRDNPARGRPDGED 246 Query: 55 NIRHIHSP----LVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 + +P Q S + L L++LL E + Sbjct: 247 PAVNAVNPYGWQWHQHDKSQPENLAFLRRLRALL--------------------DEYPNT 286 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNM-LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI 169 ++G D ++ + + + T H Sbjct: 287 TMVGEIGDDDGLARVAEYTSGGDKLHMAYCFDLLGTAHTAAHFRSFVK-RFEEVAPGGWP 345 Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227 + ++R A G +P Sbjct: 346 CWALSNHDVVRVAS-----RWGTTAPTASPALLRLGAALQMSLRGSPCIYQGDELGLP 398 >gi|271968005|ref|YP_003342201.1| G:T/U mismatch-specific DNA glycosylase-like protein [Streptosporangium roseum DSM 43021] gi|270511180|gb|ACZ89458.1| G:T/U mismatch-specific DNA glycosylase-like protein [Streptosporangium roseum DSM 43021] Length = 208 Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 19/164 (11%), Positives = 37/164 (22%), Gaps = 28/164 (17%) Query: 57 RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL-STICATQTEGQDLMIIGY 115 P+ + + EL + + D++ G Sbjct: 14 AEPSVPVPPDGPRVKAVPPTRAELDAA----------RGRTLKDVLG---PSLDVLFCGI 60 Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH-------------ISMISPWHPPG 162 P +G F+ + GN L + I+ + Sbjct: 61 NPGLYSAATGHHFA-RPGNRFWPALHRSGFTPRLLDPAEQDLLPSFGLGITNVVERASAQ 119 Query: 163 NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206 L+ E + R + P++L G F Sbjct: 120 AAELTPEEFREGGARLARLVAGTRPRVLAVAGVTAYRTAFGQPK 163 >gi|115668672|ref|XP_791344.2| PREDICTED: similar to G/T mismatch-specific thymine DNA glycosylase [Strongylocentrotus purpuratus] gi|115931630|ref|XP_001192253.1| PREDICTED: similar to G/T mismatch-specific thymine DNA glycosylase [Strongylocentrotus purpuratus] Length = 588 Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 33/115 (28%), Gaps = 3/115 (2%) Query: 45 SIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHE--LKSLLRSFHDCHLCSTSLSTICA 102 IQ + ++ Q A L E + + F+ T+ Sbjct: 11 PPPPVIQTPSPDPQQQQKPGKKPKQEKQTADKLKEKKPRRKVDRFNGMPEEEVVKRTLPD 70 Query: 103 TQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP 157 D++IIG P G ++G GN K L ++ + Sbjct: 71 ILVHNLDIVIIGINPGLMAAYKGHHYAGP-GNHFWKCLYLSGLVPEPMTCMDDVK 124 >gi|218663655|ref|ZP_03519585.1| alpha-glucosidase protein [Rhizobium etli IE4771] Length = 550 Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 17/136 (12%), Positives = 45/136 (33%), Gaps = 12/136 (8%) Query: 1 MTSKRILSQEQ------ILTIALFYADSGVYWVFDEPNNEATYES-QRKEKSIDSAIQPI 53 +TS+ ++ +L + F+ + GV + N ++ R ++ + Sbjct: 175 LTSQPDMNLHNPEVQDRLLDVVRFWLNRGVDGFRLDTINFYFHDPLLRNNPALAPERRNA 234 Query: 54 TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113 + ++ Q+ + +L LK + +++ + + L I+ Sbjct: 235 STAPAVNPYNFQEHVYDKNRPENLAFLKRFRAVLEEYP----AIAAVGEVGDSQRGLEIV 290 Query: 114 GY-TPSDSDNISGKPF 128 G T + F Sbjct: 291 GEYTSGNDKMHMCYAF 306 >gi|149912695|ref|ZP_01901229.1| DNA polymerase I [Roseobacter sp. AzwK-3b] gi|149813101|gb|EDM72927.1| DNA polymerase I [Roseobacter sp. AzwK-3b] Length = 938 Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 21/201 (10%), Positives = 51/201 (25%), Gaps = 5/201 (2%) Query: 15 IALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKA 74 + F A+ + + E + + P P + + Sbjct: 277 LLAFLAEMEFRTLSKRIADSLGAEPPVIPDTNPAGANPTEGDAAPDWPAID--PDSYEHV 334 Query: 75 CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYT--PSDSDNISGKPFSGKT 132 + L++ + L + T + L+ I P + I + G + Sbjct: 335 RDMEALEAWIAHIQARGLVAVDTETT-SLNEMQAALVGISLAVEPGRACYIPLRHTEGAS 393 Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192 G++ + + + + P M+ I R ++P Sbjct: 394 GDLFSSDALAEGQLDLDAVLGALKPMLEDDAILKIGQNMKYDAKIFARHGIRVAPFDDTM 453 Query: 193 IGNKTKNFFFNNDAQKTYQNL 213 + + N + T Sbjct: 454 LMSYALNAGIHGHGMDTLSER 474 >gi|320162576|ref|YP_004175801.1| hypothetical protein ANT_31770 [Anaerolinea thermophila UNI-1] gi|319996430|dbj|BAJ65201.1| hypothetical protein ANT_31770 [Anaerolinea thermophila UNI-1] Length = 241 Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 32/107 (29%), Gaps = 9/107 (8%) Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE--MEICRPIIMRQIELISPKILL 191 L HI + S + C+ I +IE++ P IL+ Sbjct: 107 KKFKPNLDIQSSHLYFAHI-NTVKCCVCNKNHASAPVILFKNCQRYIWGEIEILKPDILI 165 Query: 192 FIGNKTKNFF---FN-NDAQKTYQNLGKWSNLCTPHSIIPTLATVHP 234 G + + F +++ +W + + T HP Sbjct: 166 TQGKRAREALKEVFGIFESEDCSLCRSQW--IRLGEKSVLWFPTYHP 210 >gi|1378107|gb|AAC50540.1| G/T mismatch-specific thymine DNA glycosylase [Homo sapiens] Length = 410 Score = 37.0 bits (84), Expect = 2.3, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 43/126 (34%), Gaps = 3/126 (2%) Query: 26 WVFDEPNNEATYESQRKEKSIDS--AIQPITNIRHIHSPLVQQADSIAQKACSLHELKSL 83 EP EA +RK ++ + ++P + S + +K ++K Sbjct: 48 APAQEPVQEAPKGRKRKPRTTEPKQPVEPKKPVESKKSGKSAKPKEKQEKITDTFKVKRK 107 Query: 84 LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143 + F+ T+ T D++IIG P G + G GN K L Sbjct: 108 VDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGP-GNHFWKCLFMS 166 Query: 144 EIMRTQ 149 + Q Sbjct: 167 GLSEVQ 172 >gi|307719182|ref|YP_003874714.1| oligo-1,6-glucosidase [Spirochaeta thermophila DSM 6192] gi|306532907|gb|ADN02441.1| oligo-1,6-glucosidase [Spirochaeta thermophila DSM 6192] Length = 546 Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats. Identities = 20/201 (9%), Positives = 50/201 (24%), Gaps = 37/201 (18%) Query: 9 QEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQAD 68 +E++ + ++ D G+ K + + +P Sbjct: 173 REELYRMVNWWLDKGIDGF-----RLDAISVISKHPDFPDGDEVGPDGLAPGTPYFMNGP 227 Query: 69 SIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128 + + L EL + C G+DL+ +G + Sbjct: 228 HLGEY---LEEL------YRRC--------------FHGRDLLTVGECAGVHPDDLP-HL 263 Query: 129 SGKTGNM-----LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICR---PIIMR 180 G + +D M + + PW + + + + Sbjct: 264 VGDDKALKSIFFMDHMFLDLGPDGYRFGNPYPYPWRWSQFKRIVYTWYKAFSRAGWMSFY 323 Query: 181 QIELISPKILLFIGNKTKNFF 201 P+ + G +++ Sbjct: 324 LGNHDFPRCISRFGCDGEHWL 344 >gi|254448669|ref|ZP_05062127.1| hypothetical protein GP5015_517 [gamma proteobacterium HTCC5015] gi|198261677|gb|EDY85964.1| hypothetical protein GP5015_517 [gamma proteobacterium HTCC5015] Length = 248 Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats. Identities = 28/233 (12%), Positives = 55/233 (23%), Gaps = 40/233 (17%) Query: 29 DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIA-QKACSLHELKSLLRSF 87 + P E S + +P QQ + + + L L S Sbjct: 53 EAPEAEQGEHHLVVRPSGRQPVPNEALGAEETAPKRQQPEDTPQETPSTPLPLDLQLASL 112 Query: 88 HDCHLCSTSLSTICATQTEGQDLMII-GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM 146 D ++I+ G D G P+ G+ + M+++ Sbjct: 113 PDFPQRQ------------QGRVLIVCGEAEGDEG--QGDPYEGELAQLFSDMIKATRWT 158 Query: 147 RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206 + + RQ + ++ + Sbjct: 159 PEMVVL--------------------ASHATPARQAIQATGADVIMGFGRAACRELWGVG 198 Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259 G+ P +AT HP + K+ W + + L Sbjct: 199 ALPEHLRGR----AVPLFGAQAIATHHPILALADASFKRPIWEDIKRAIEVLA 247 >gi|116494208|ref|YP_805942.1| Uracil-DNA glycosylase [Lactobacillus casei ATCC 334] gi|191637537|ref|YP_001986703.1| hypothetical protein LCABL_07200 [Lactobacillus casei BL23] gi|116104358|gb|ABJ69500.1| Uracil-DNA glycosylase [Lactobacillus casei ATCC 334] gi|190711839|emb|CAQ65845.1| Putative uncharacterized protein ysiD [Lactobacillus casei BL23] gi|327381583|gb|AEA53059.1| hypothetical protein LC2W_0725 [Lactobacillus casei LC2W] gi|327384749|gb|AEA56223.1| hypothetical protein LCBD_0725 [Lactobacillus casei BD-II] Length = 193 Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats. Identities = 15/137 (10%), Positives = 38/137 (27%), Gaps = 9/137 (6%) Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRN 165 ++I P + ++ +G+ L + + + P Sbjct: 33 PEATILIASQAPGRKAQTTKTYWNDPSGDRLRTWMGVTKDQFYHSGKIAVLPLDFYYPGK 92 Query: 166 LSNIEMEICRPIIMR-----QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220 + ++ + + + ++ + IG + ++ +KT K Sbjct: 93 GKSGDLPPRKDFAAKWHPSLLALMPKIQLTIVIGAYAQKYYLRKRREKTLTATVKNFRAY 152 Query: 221 TPHSIIPTLATVHPQEL 237 P VHP L Sbjct: 153 LPDY----FPIVHPSPL 165 >gi|258507636|ref|YP_003170387.1| uracil-DNA glycosylase [Lactobacillus rhamnosus GG] gi|257147563|emb|CAR86536.1| Uracil-DNA glycosylase [Lactobacillus rhamnosus GG] gi|259648985|dbj|BAI41147.1| uracil-DNA glycosylase [Lactobacillus rhamnosus GG] Length = 193 Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats. Identities = 15/137 (10%), Positives = 38/137 (27%), Gaps = 9/137 (6%) Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRN 165 ++I P + ++ +G+ L + + + P Sbjct: 33 PDATILIASQAPGRKAQTTKTYWNDPSGDRLRTWMGVTKDQFYHSGKIAVLPLDFYYPGK 92 Query: 166 LSNIEMEICRPIIMR-----QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220 + ++ + + + ++ + IG + ++ +KT K Sbjct: 93 GKSGDLPPRKDFAAKWHPSLLALMPHIQLTIVIGAYAQKYYLGKRREKTLTATVKNFRAY 152 Query: 221 TPHSIIPTLATVHPQEL 237 P VHP L Sbjct: 153 LPTY----FPIVHPSPL 165 >gi|199596981|ref|ZP_03210414.1| Uracil-DNA glycosylase [Lactobacillus rhamnosus HN001] gi|199592114|gb|EDZ00188.1| Uracil-DNA glycosylase [Lactobacillus rhamnosus HN001] Length = 193 Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats. Identities = 15/137 (10%), Positives = 38/137 (27%), Gaps = 9/137 (6%) Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRN 165 ++I P + ++ +G+ L + + + P Sbjct: 33 PDATILIASQAPGRKAQTTKTYWNDPSGDRLRTWMGVTKDQFYHSGKIAVLPLDFYYPGK 92 Query: 166 LSNIEMEICRPIIMR-----QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220 + ++ + + + ++ + IG + ++ +KT K Sbjct: 93 GKSGDLPPRKDFAAKWHPSLLALMPHIQLTIVIGAYAQKYYLGKRREKTLTATVKNFRAY 152 Query: 221 TPHSIIPTLATVHPQEL 237 P VHP L Sbjct: 153 LPTY----FPIVHPSPL 165 >gi|317123372|ref|YP_004097484.1| hypothetical protein Intca_0199 [Intrasporangium calvum DSM 43043] gi|315587460|gb|ADU46757.1| hypothetical protein Intca_0199 [Intrasporangium calvum DSM 43043] Length = 307 Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 9/56 (16%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 99 TICATQ--TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHI 152 + +++IG P+ + IS + G+ G + +L + I + + + Sbjct: 39 PVFHRGRLDGSARVLVIGQDPATHEAISRRVLVGEAGQRVQGLLARLGITHSYVML 94 >gi|229553664|ref|ZP_04442389.1| uracil-DNA glycosylase [Lactobacillus rhamnosus LMS2-1] gi|258538807|ref|YP_003173306.1| uracil-DNA glycosylase [Lactobacillus rhamnosus Lc 705] gi|229312941|gb|EEN78914.1| uracil-DNA glycosylase [Lactobacillus rhamnosus LMS2-1] gi|257150483|emb|CAR89455.1| Uracil-DNA glycosylase [Lactobacillus rhamnosus Lc 705] Length = 193 Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 15/137 (10%), Positives = 38/137 (27%), Gaps = 9/137 (6%) Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRN 165 ++I P + ++ +G+ L + + + P Sbjct: 33 PDATILIASQAPGRKAQTTKTYWNDPSGDRLRTWMGVTKDQFYHSGKIAVLPLDFYYPGK 92 Query: 166 LSNIEMEICRPIIMR-----QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220 + ++ + + + ++ + IG + ++ +KT K Sbjct: 93 GKSGDLPPRKDFAAKWHPSLLALMPHIQLTIVIGAYAQKYYLGKRREKTLTATVKNFRAY 152 Query: 221 TPHSIIPTLATVHPQEL 237 P VHP L Sbjct: 153 LPTY----FPIVHPSPL 165 >gi|331698478|ref|YP_004334717.1| uracil-DNA glycosylase [Pseudonocardia dioxanivorans CB1190] gi|326953167|gb|AEA26864.1| Uracil-DNA glycosylase superfamily [Pseudonocardia dioxanivorans CB1190] Length = 195 Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats. Identities = 21/164 (12%), Positives = 39/164 (23%), Gaps = 23/164 (14%) Query: 84 LRSFHDCHLCSTSLSTI----CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKM 139 F L + TI A ++ G P +G F+ + GN + Sbjct: 2 ASRFSAAELAAARDRTIDDVLPAPGDPPLRVLFCGINPGLVSAATGHHFA-RPGNRFWPV 60 Query: 140 LQSIEIMRTQIH-------------ISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186 L + I+ + L++ E+ + + Sbjct: 61 LHDAGFTPRLLRPAEQDELRGLGLGITNMVARTTARADELADDELRAGGERLRELVAAER 120 Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230 P+ L +G F + I L Sbjct: 121 PRWLAVVGVTAYRVAFAAPRAAVGP-----QERTLGDTGIWVLP 159 >gi|332840215|ref|XP_003313949.1| PREDICTED: G/T mismatch-specific thymine DNA glycosylase isoform 1 [Pan troglodytes] Length = 406 Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 44/126 (34%), Gaps = 3/126 (2%) Query: 26 WVFDEPNNEATYESQRKEKSIDS--AIQPITNIRHIHSPLVQQADSIAQKACSLHELKSL 83 EP EA +RK ++ + ++P + S ++ +K ++K Sbjct: 44 APAQEPVQEAPKGRKRKPRTTEPKQPVEPKKPVESKKSGKSARSKEKQEKITDTFKVKRK 103 Query: 84 LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143 + F+ T+ T D++IIG P G + G GN K L Sbjct: 104 VDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGP-GNHFWKCLFMS 162 Query: 144 EIMRTQ 149 + Q Sbjct: 163 GLSEVQ 168 >gi|332840213|ref|XP_509324.3| PREDICTED: G/T mismatch-specific thymine DNA glycosylase isoform 2 [Pan troglodytes] Length = 410 Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 44/126 (34%), Gaps = 3/126 (2%) Query: 26 WVFDEPNNEATYESQRKEKSIDS--AIQPITNIRHIHSPLVQQADSIAQKACSLHELKSL 83 EP EA +RK ++ + ++P + S ++ +K ++K Sbjct: 48 APAQEPVQEAPKGRKRKPRTTEPKQPVEPKKPVESKKSGKSARSKEKQEKITDTFKVKRK 107 Query: 84 LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143 + F+ T+ T D++IIG P G + G GN K L Sbjct: 108 VDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGP-GNHFWKCLFMS 166 Query: 144 EIMRTQ 149 + Q Sbjct: 167 GLSEVQ 172 >gi|282856433|ref|ZP_06265712.1| peptidase U32 [Pyramidobacter piscolens W5455] gi|282585804|gb|EFB91093.1| peptidase U32 [Pyramidobacter piscolens W5455] Length = 819 Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats. Identities = 11/81 (13%), Positives = 25/81 (30%), Gaps = 3/81 (3%) Query: 9 QEQILTIALFYADSGVYWVF--DEPNNEATYESQRKEKSIDSAIQPITNIRHIH-SPLVQ 65 ++ F +++GV + D + S ITN + Sbjct: 76 MRELADYLAFLSNAGVDAIIVQDLGVLRLARLVASELPRHASTQMTITNSAGARFAGDCG 135 Query: 66 QADSIAQKACSLHELKSLLRS 86 ++ + SL +L++ Sbjct: 136 MVRAVPARELSLADLRAAAAE 156 >gi|167535609|ref|XP_001749478.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772106|gb|EDQ85763.1| predicted protein [Monosiga brevicollis MX1] Length = 1903 Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 32/99 (32%), Gaps = 12/99 (12%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHEL-----KSLL- 84 P+ ++++K + + + P+ +A A S+ L + ++ Sbjct: 322 PSRSKRTKTEQKSGAHHPNAESLRAEEQPSEPVDLEATDAADAEPSIESLPVEGGRDIVQ 381 Query: 85 ------RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117 + CH S+ + Q + +I P Sbjct: 382 IEVNSEATCAICHCKSSMQEMVVCNGDCDQRVHLICVQP 420 >gi|254409348|ref|ZP_05023129.1| Alpha amylase, catalytic domain subfamily, putative [Microcoleus chthonoplastes PCC 7420] gi|196183345|gb|EDX78328.1| Alpha amylase, catalytic domain subfamily, putative [Microcoleus chthonoplastes PCC 7420] Length = 598 Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 34/86 (39%), Gaps = 7/86 (8%) Query: 3 SKRILSQE------QILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNI 56 S+ L+ IL A F+ D G+ + N +++Q ++ + + + Sbjct: 205 SQPDLNWHNPEVVDAILVRAKFWLDLGIDGFRIDAPNFFMHDAQLRDNPVRPEDASLPDG 264 Query: 57 RHIHSPLVQQA-DSIAQKACSLHELK 81 +P+V+Q + +L LK Sbjct: 265 VAPDNPVVRQLFKYNFCRPETLDALK 290 >gi|254414338|ref|ZP_05028105.1| Alpha amylase, catalytic domain subfamily, putative [Microcoleus chthonoplastes PCC 7420] gi|196179013|gb|EDX74010.1| Alpha amylase, catalytic domain subfamily, putative [Microcoleus chthonoplastes PCC 7420] Length = 573 Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 27/74 (36%), Gaps = 1/74 (1%) Query: 9 QEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQ-A 67 ++ IL +A F+ D GV + N ++ Q ++ + H P Q Sbjct: 202 RQAILDVARFWLDMGVDGFRLDVVNFFAHDRQLRDNPPRPKNRKRPAGADAHDPFFSQWN 261 Query: 68 DSIAQKACSLHELK 81 + +L L+ Sbjct: 262 KYNFCQPETLEFLE 275 >gi|317121348|ref|YP_004101351.1| 5-formyltetrahydrofolate cyclo-ligase [Thermaerobacter marianensis DSM 12885] gi|315591328|gb|ADU50624.1| 5-formyltetrahydrofolate cyclo-ligase [Thermaerobacter marianensis DSM 12885] Length = 426 Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats. Identities = 22/186 (11%), Positives = 56/186 (30%), Gaps = 24/186 (12%) Query: 31 PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90 P + + + + Q L EL++L Sbjct: 196 PVDPHDLSVDVVVTPDQVIRTRTPYPKPRGIRWEEVTEEDLQAMPVLRELRAL------- 248 Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI----- 145 L + G + +G P + +G F+G N+ ++L Sbjct: 249 -LWERMT--VPEVLVPGLAAVFVGLNPGRASATAGHHFAGPN-NLFWRLLHEAGFVPRVL 304 Query: 146 --------MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197 R + ++ + P G +L+ E+ ++ ++ + P++++ +G + Sbjct: 305 RPEEDGLLPRWGLGVTNVVPRATQGEADLTWDELAAGGAVLREKMARVRPRLVVLLGKQV 364 Query: 198 KNFFFN 203 + Sbjct: 365 YRAYAG 370 >gi|302540417|ref|ZP_07292759.1| G/U mismatch-specific DNA glycosylase [Streptomyces hygroscopicus ATCC 53653] gi|302458035|gb|EFL21128.1| G/U mismatch-specific DNA glycosylase [Streptomyces himastatinicus ATCC 53653] Length = 185 Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats. Identities = 21/153 (13%), Positives = 43/153 (28%), Gaps = 19/153 (12%) Query: 91 HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150 L + + +G ++ G P +G F+ + GN +L + + Sbjct: 7 ELEAARDRIVPDVVGDGLRVLFCGINPGLMTAATGHHFA-RPGNRFWPVLHASGFTPRLL 65 Query: 151 H-------------ISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197 H I+ + L++ E I+ ++ + P+ L G Sbjct: 66 HPSEQGELPSYGLGITNVVARASARADELTDEEYREGGRILEEKVRRLRPRWLAVAGVTA 125 Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230 F + K + I L Sbjct: 126 YRVAFGDKRAKIGP-----QERTIGGTRIWALP 153 >gi|146280602|ref|YP_001170755.1| uracil-DNA glycosylase [Pseudomonas stutzeri A1501] gi|145568807|gb|ABP77913.1| probable uracil-DNA glycosylase [Pseudomonas stutzeri A1501] Length = 223 Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats. Identities = 15/117 (12%), Positives = 27/117 (23%), Gaps = 7/117 (5%) Query: 78 HELKSLLRSFHDCHLCSTSL------STICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 L+ L + I L G P + G+PF G Sbjct: 7 QALRDLAADTDGIDTAIYATYERDPLEPIIGLGDADAPLCFFGRDPGREEVRHGEPFIGS 66 Query: 132 TGNMLDKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP 187 G ++ ++L + + N + + M P Sbjct: 67 GGQIVRRVLYRHLHGAEMPDFEAGRALGRHYFWINTVPYKPIGNKAWSMAVKRCFQP 123 >gi|120537422|gb|AAI29089.1| Thymine-DNA glycosylase [Rattus norvegicus] Length = 385 Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 3/128 (2%) Query: 24 VYWVFDEPNNEATYESQRKEKSIDS--AIQPITNIRHIHSPLVQQADSIAQKACSLHELK 81 +P EA +RK ++ ++ ++P S ++ +K ++K Sbjct: 18 AEAPAQDPVPEAPKRRKRKTRAAEAQDPVEPKKPAASKKSGKSTKSKEKQEKITDTFKVK 77 Query: 82 SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 + F+ T+ T D++IIG P G + G GN K L Sbjct: 78 RKVDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGP-GNHFWKCLF 136 Query: 142 SIEIMRTQ 149 + Q Sbjct: 137 MSGLSEVQ 144 >gi|16758544|ref|NP_446181.1| G/T mismatch-specific thymine DNA glycosylase [Rattus norvegicus] gi|13027783|gb|AAK08978.1| T:G mismatch thymine glycosylase [Rattus norvegicus] Length = 386 Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 3/128 (2%) Query: 24 VYWVFDEPNNEATYESQRKEKSIDS--AIQPITNIRHIHSPLVQQADSIAQKACSLHELK 81 +P EA +RK ++ ++ ++P S ++ +K ++K Sbjct: 18 AEAPAQDPVPEAPKRRKRKTRAAEAQDPVEPKKPAASKKSGKSTKSKEKQEKITDTFKVK 77 Query: 82 SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 + F+ T+ T D++IIG P G + G GN K L Sbjct: 78 RKVDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGP-GNHFWKCLF 136 Query: 142 SIEIMRTQ 149 + Q Sbjct: 137 MSGLSEVQ 144 >gi|149067325|gb|EDM17058.1| thymine-DNA glycosylase, isoform CRA_b [Rattus norvegicus] Length = 386 Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 3/128 (2%) Query: 24 VYWVFDEPNNEATYESQRKEKSIDS--AIQPITNIRHIHSPLVQQADSIAQKACSLHELK 81 +P EA +RK ++ ++ ++P S ++ +K ++K Sbjct: 18 AEAPAQDPVPEAPKRRKRKTRAAEAQDPVEPKKPAASKKSGKSTKSKEKQEKITDTFKVK 77 Query: 82 SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141 + F+ T+ T D++IIG P G + G GN K L Sbjct: 78 RKVDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGP-GNHFWKCLF 136 Query: 142 SIEIMRTQ 149 + Q Sbjct: 137 MSGLSEVQ 144 >gi|160874725|ref|YP_001554041.1| phage SPO1 DNA polymerase domain-containing protein [Shewanella baltica OS195] gi|160860247|gb|ABX48781.1| phage SPO1 DNA polymerase domain protein [Shewanella baltica OS195] gi|315266966|gb|ADT93819.1| Uracil-DNA glycosylase superfamily [Shewanella baltica OS678] Length = 232 Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats. Identities = 30/233 (12%), Positives = 59/233 (25%), Gaps = 62/233 (26%) Query: 82 SLLRSFHDCHLCST----SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 +LL + C LC + I + ++I G P + G PF +G L Sbjct: 3 ALLTKINACTLCQADLPLAPKPIL-QASSQARILIAGQAPGVKTHHKGIPFDDASGERLR 61 Query: 138 KML---QSIEIMRTQIHISMISPWHP---------PGNRNLSNIEMEICRPIIMRQIEL- 184 L + I + P G++ ++ + Sbjct: 62 TWLNVTREQFYDPALFAIVPMGFCFPGSIEKNGKKQGDKPPRPECAATWHQALLALMPQI 121 Query: 185 -----------------------------ISPK--ILLFIGNKTKNFFFNNDAQKTYQNL 213 P+ + + Q Sbjct: 122 ELIVILGQYAIDYHLPRESSVAINLTSPLTKPQTTHINVSSSAKAKTIPKLKPITVTQAC 181 Query: 214 GKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKNL 261 +W + ++P HP L Q+P +++ L L+ + +L Sbjct: 182 AQWQQYWPKYFVLP-----HPSPRNNLWLKQHPEFERDM---LPRLRMRIASL 226 >gi|319944574|ref|ZP_08018843.1| maltodextrose utilization protein MalA [Lautropia mirabilis ATCC 51599] gi|319742170|gb|EFV94588.1| maltodextrose utilization protein MalA [Lautropia mirabilis ATCC 51599] Length = 550 Score = 36.3 bits (82), Expect = 3.9, Method: Composition-based stats. Identities = 25/189 (13%), Positives = 53/189 (28%), Gaps = 16/189 (8%) Query: 9 QEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQA- 67 Q+ +L F+ + GV + N + + S +P Q Sbjct: 188 QDALLADMRFWLELGVDGFRLDTVNFYFHSQTLHDNPPQSRRGKAIPEADRVNPYTWQRH 247 Query: 68 ---DSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNIS 124 + + L L++LL F D +T+ + +I YT Sbjct: 248 LYDKTQPENLAFLKRLRALLDQFPD-------TTTVGEVGADNALEVIAQYTADGDKLHM 300 Query: 125 GKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIEL 184 F ++L + + + + I P ++ I +Q Sbjct: 301 AYSF-----DLLHEHHSAEYLHQVFGKFGRIVKDGWPSWAISNHDCPRIRTRWGGQQGGE 355 Query: 185 ISPKILLFI 193 ++ + Sbjct: 356 AVARLAAAM 364 >gi|325001865|ref|ZP_08122977.1| G/U mismatch-specific DNA glycosylase [Pseudonocardia sp. P1] Length = 186 Score = 36.3 bits (82), Expect = 4.1, Method: Composition-based stats. Identities = 15/118 (12%), Positives = 33/118 (27%), Gaps = 14/118 (11%) Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH--------- 151 ++ G P +G F+ + GN +L + Sbjct: 23 PGPGDPPLRVLFCGINPGLVSAATGHHFA-RPGNRFWPVLHGSGFTPRLLTPAEQGELAG 81 Query: 152 ----ISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 I+ ++P L++ E+ + + +P+ L +G F Sbjct: 82 LGLGITNMAPRATARADELTDDELVAGGEHLRTLVGARAPRWLAVVGIGAYRTAFGRR 139 >gi|114705727|ref|ZP_01438630.1| probable alpha-glucosidase protein [Fulvimarina pelagi HTCC2506] gi|114538573|gb|EAU41694.1| probable alpha-glucosidase protein [Fulvimarina pelagi HTCC2506] Length = 558 Score = 36.3 bits (82), Expect = 4.5, Method: Composition-based stats. Identities = 21/222 (9%), Positives = 48/222 (21%), Gaps = 27/222 (12%) Query: 9 QEQILTIALFYADSGVYWVFDEPNNEATYESQ-RKEKSIDSAIQPITNIRHIHSPLVQQA 67 + +L F+ + GV + N ++++ R + A++ T Q Sbjct: 196 RSALLGEMRFWLERGVDGFRLDTANFYFHDAELRDNPPLPEAMRSETYASRADPYNFQHH 255 Query: 68 DSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127 + +L LK + +G + I Sbjct: 256 VHDRNRPENLDFLKE-------------MRQVLDEYGAVA-----VGEIGERTTGIEMMG 297 Query: 128 FSGKTGNMLDKM--LQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELI 185 G+ L + + + ++R Sbjct: 298 EYTSGGDKLQMCYAFEFLSGAIPEPQTIRGVIERFDAAGPDGWACWAFSNHDVVRHASR- 356 Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227 G + ++ A G +P Sbjct: 357 -----WTKGREKRDAILKLAAGILMTLRGSVCIYQGEELGLP 393 >gi|327478879|gb|AEA82189.1| uracil-DNA glycosylase [Pseudomonas stutzeri DSM 4166] Length = 226 Score = 36.3 bits (82), Expect = 4.7, Method: Composition-based stats. Identities = 23/221 (10%), Positives = 46/221 (20%), Gaps = 45/221 (20%) Query: 78 HELKSLLRSFHDCHLCSTSL------STICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131 L+ L + I L G P + G+PF G Sbjct: 10 QALRDLAADTDGIDTAIYATYDRDPLEPIIGLGDADAPLCFFGRDPGREEVRHGEPFIGA 69 Query: 132 TGNMLDKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--- 187 G ++ ++L + + N + + M P Sbjct: 70 GGQIVRRVLYRHLNGAEMPDFEAGRALGRHYFWINTVPYKPIGNKAWSMAVKRRFQPLMR 129 Query: 188 ---------KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP---------------- 222 + ++ +G F + + + Sbjct: 130 QLLIDSWHGRHIVTLGR---EAFLWFAIDQPREARQRLEAYWQREDRFTANLDIDLQDAQ 186 Query: 223 --HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261 HP + K+ L+ L+ L Sbjct: 187 GLARTFTLHPLPHPSP-LNQTWFKRFP----ALLEARLRQL 222 >gi|195450710|ref|XP_002072599.1| GK13687 [Drosophila willistoni] gi|194168684|gb|EDW83585.1| GK13687 [Drosophila willistoni] Length = 1761 Score = 36.3 bits (82), Expect = 4.7, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 63/180 (35%), Gaps = 20/180 (11%) Query: 97 LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML-------------QSI 143 TI + D++I+G P G ++G GN K L + Sbjct: 762 KRTIPDHLCDNLDIVIVGINPGLFAAYKGHHYAGP-GNHFWKCLYLAGLTQEQMSADEDH 820 Query: 144 EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203 ++++ I + + G+ +L+ E++ I++ +++ PK+ +F G F Sbjct: 821 KLIKQGIGFTNMVARATKGSADLTRKEIKEGSRILLEKLQRFRPKVAVFNGKLIFEVFSG 880 Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHP--QELIQYPLIKKNTWHALITLKKALKNL 261 + + + I + + +L + K + AL + L L Sbjct: 881 KKEFHFGRQPDRV---EGTDTYIWVMPSSSARCAQLPRA-ADKVPFYAALKKFRDYLNGL 936 >gi|297157455|gb|ADI07167.1| ATP-dependent DNA helicase [Streptomyces bingchenggensis BCW-1] Length = 1221 Score = 36.3 bits (82), Expect = 5.0, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 18/66 (27%) Query: 24 VYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSL 83 D P+++ + A + P ++A +A L L Sbjct: 920 ADEAADRPDDDLWAGWPAETGHPRPAPEEGATAAPGGGPPPEEARLVASWDRDLDALAGE 979 Query: 84 LRSFHD 89 LR Sbjct: 980 LRRARA 985 >gi|254474550|ref|ZP_05087936.1| oligo-1,6-glucosidase [Ruegeria sp. R11] gi|214028793|gb|EEB69628.1| oligo-1,6-glucosidase [Ruegeria sp. R11] Length = 552 Score = 36.3 bits (82), Expect = 5.0, Method: Composition-based stats. Identities = 27/238 (11%), Positives = 61/238 (25%), Gaps = 40/238 (16%) Query: 1 MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPIT 54 + S+ L+ Q+ +L + F+ + GV + N ++++ + Q Sbjct: 179 LVSQPDLNFHCPAVQDALLDVTRFWLERGVDGFRLDTINFYFHDAELRSNPALPPEQRNA 238 Query: 55 NIRHIHSP-LVQQADSIAQKACSLHEL---KSLLRSFHDCHLCSTSLSTICATQTEGQDL 110 I +P Q+ + +L L ++LL + + + + + L Sbjct: 239 TIAPSVNPYNHQEHLYSKNQPENLAFLGRFRALLDEY-------PAKAAVGEVGDAQRGL 291 Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170 I+G +G +G + + + Sbjct: 292 EIMG-----------SYTAGNSGVHMCYAFELLAKDVLTASRLAEVFAEVDRVAANGWAC 340 Query: 171 MEICRPIIMRQIELISPKILLFIG-NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227 ++R G N F G +P Sbjct: 341 WAFSNHDVIRHSSR--------WGLNPAAQRLFTTMMMC---LRGTTCIYQGEELGLP 387 >gi|326797260|ref|YP_004315080.1| alpha amylase catalytic region [Marinomonas mediterranea MMB-1] gi|326548024|gb|ADZ93244.1| alpha amylase catalytic region [Marinomonas mediterranea MMB-1] Length = 539 Score = 35.9 bits (81), Expect = 5.4, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 26/76 (34%), Gaps = 1/76 (1%) Query: 9 QEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSP-LVQQA 67 ++ L F+ D GV + N + ++ +P T +P Q+ Sbjct: 181 RQANLDNMRFWLDLGVDGFRLDTVNFYFHSQGLEDNPPVPPGEPKTKGAPEDNPYSYQRH 240 Query: 68 DSIAQKACSLHELKSL 83 + +L LK L Sbjct: 241 VYDLSRPENLDFLKDL 256 >gi|328789780|ref|XP_392189.4| PREDICTED: hypothetical protein LOC408649 [Apis mellifera] Length = 1098 Score = 35.9 bits (81), Expect = 5.5, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 65/206 (31%), Gaps = 18/206 (8%) Query: 39 SQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLS 98 + + I +P + ++A + E + F S Sbjct: 233 NPQLTAHQPKKRGRKRKSEMILTPEEAELAEAKKRAKTYKE-RKKHDRFDGMPEEEVSKR 291 Query: 99 TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM------------ 146 + T D++IIG P G ++G GN K L + Sbjct: 292 VLPDHLTNNLDIIIIGINPGLFAAYKGHHYAGP-GNHFWKCLHLSGLTPEPLTADDDYKL 350 Query: 147 -RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205 R I + + G+ +L+ E++ I++ ++ PKI +F G F Sbjct: 351 LRFGIGFTNMVARATKGSADLTRKEIKEGSHILLEKLRKYKPKIAVFNGKLIYEVFSGKK 410 Query: 206 AQKTYQNLGKWSNLCTPHSIIPTLAT 231 + + + + ++ + + + Sbjct: 411 DFGFGR---QPNLVEGTNTYMWVMPS 433 >gi|218752958|ref|ZP_03531754.1| hypothetical protein MtubG1_05720 [Mycobacterium tuberculosis GM 1503] Length = 122 Score = 35.9 bits (81), Expect = 5.7, Method: Composition-based stats. Identities = 8/59 (13%), Positives = 18/59 (30%) Query: 42 KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI 100 + + + Q ++A A S+ EL +L+ C + + Sbjct: 43 PVEPGSGWPGDPATPQTPVAADAAQVSALAGGAGSICELNALISVCRACPRLVSWREEV 101 >gi|190345614|gb|EDK37531.2| hypothetical protein PGUG_01629 [Meyerozyma guilliermondii ATCC 6260] Length = 967 Score = 35.9 bits (81), Expect = 6.0, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 22/70 (31%), Gaps = 2/70 (2%) Query: 27 VFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHEL--KSLL 84 V P + + +K + ++ P R Q + A ++ L K L Sbjct: 95 VQSSPLPQQVEQPFQKPQPRPNSGSPAYTPREPPQQESIQEERSAAGPKTVANLPRKRAL 154 Query: 85 RSFHDCHLCS 94 + C + Sbjct: 155 TACDACRIKK 164 >gi|139948234|ref|NP_001077165.1| G/T mismatch-specific thymine DNA glycosylase [Bos taurus] gi|134024609|gb|AAI34452.1| TDG protein [Bos taurus] gi|296487665|gb|DAA29778.1| thymine-DNA glycosylase [Bos taurus] Length = 407 Score = 35.9 bits (81), Expect = 6.4, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 4/124 (3%) Query: 29 DEPNNEATYESQRKEKS---IDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLR 85 EP E + ++++ + ++P S ++ +K ++K + Sbjct: 51 QEPTRETPPKGRKRKPRTTEPKTPVEPPEPAEAKKSGKSTKSKEKQEKITDTFKVKRKVD 110 Query: 86 SFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI 145 F+ T+ T D++IIG P G + G GN K L + Sbjct: 111 RFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGP-GNHFWKCLFMSGL 169 Query: 146 MRTQ 149 Q Sbjct: 170 SEVQ 173 >gi|255264649|ref|ZP_05343991.1| oligo-1,6-glucosidase [Thalassiobium sp. R2A62] gi|255106984|gb|EET49658.1| oligo-1,6-glucosidase [Thalassiobium sp. R2A62] Length = 543 Score = 35.9 bits (81), Expect = 6.5, Method: Composition-based stats. Identities = 24/233 (10%), Positives = 57/233 (24%), Gaps = 32/233 (13%) Query: 1 MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPIT 54 + S+ L+ Q+ +L F+ D GV + N + + ++ Q + Sbjct: 170 LASQPDLNFHHMPVQDALLEATRFWLDRGVDGFRLDTINFYMADKELRDNPALPLDQRNS 229 Query: 55 NIRHIHSP-LVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113 I +P Q+ + +L L+ + + + + + L I+ Sbjct: 230 TIAPSVNPYNHQEHLHSKNQPENLEFLRKFRALLDEYP----AATAVGEVGDAQRGLEIM 285 Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173 G G+ L M + E++ + + E+ Sbjct: 286 GE--------------YTRGDDLVHMCYAFELLEQKPLTAPRV-----AEVFARVDEVAA 326 Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII 226 + + G + Sbjct: 327 DGWACWAYSNHDVQRHVSRWNLTP--AALRLFTTMLMCLRGSVCLYQGEELGL 377 >gi|315042980|ref|XP_003170866.1| CMGC protein kinase [Arthroderma gypseum CBS 118893] gi|311344655|gb|EFR03858.1| CMGC protein kinase [Arthroderma gypseum CBS 118893] Length = 340 Score = 35.9 bits (81), Expect = 6.6, Method: Composition-based stats. Identities = 10/68 (14%), Positives = 18/68 (26%) Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241 P + +G + G + +I L P+ L + P Sbjct: 211 RGWSYPIDIWSVGLTAWDMLEKKLLFTAKDKDGDVYDAAHFAQLIAALGPPPPEFLARNP 270 Query: 242 LIKKNTWH 249 K + W Sbjct: 271 EKKADFWD 278 >gi|89068282|ref|ZP_01155692.1| probable alpha-glucosidase protein [Oceanicola granulosus HTCC2516] gi|89046199|gb|EAR52257.1| probable alpha-glucosidase protein [Oceanicola granulosus HTCC2516] Length = 529 Score = 35.5 bits (80), Expect = 6.8, Method: Composition-based stats. Identities = 24/237 (10%), Positives = 59/237 (24%), Gaps = 39/237 (16%) Query: 1 MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYESQ-RKEKSIDSAIQPI 53 +TS+ L+ Q+ +L + F+ + G + N ++ R + ++ Sbjct: 156 LTSQPDLNLHSMEVQDALLDVVRFWLEKGCDGFRLDTINFYFHDKDLRDNPPLAPELRNA 215 Query: 54 TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113 ++ Q+ + +L L+ + L + + + L I+ Sbjct: 216 NIAPSVNPYNHQEHLHSKNQPENLDFLRRVRA-----ELDRYGAAAVGEVGDAQRGLQIM 270 Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP---WHPPGNRNLSNIE 170 G G+ L +M + E + T + + Sbjct: 271 GQ--------------YTAGDELMQMCYAFEFLATDPLTAGRIAEVMTRVDEEASDGWAC 316 Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227 + R + + G +P Sbjct: 317 WAFSNHDVTRHTTR------WNLTPAAQRMLCTLLMC----LRGSVCLYQGEELGLP 363 >gi|67922649|ref|ZP_00516154.1| Uracil-DNA glycosylase superfamily [Crocosphaera watsonii WH 8501] gi|67855497|gb|EAM50751.1| Uracil-DNA glycosylase superfamily [Crocosphaera watsonii WH 8501] Length = 225 Score = 35.5 bits (80), Expect = 7.9, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 42/118 (35%), Gaps = 13/118 (11%) Query: 97 LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML------------QSIE 144 I ++ G + G+P G G ML K + ++ Sbjct: 35 TQPILYAGNLDSNICFFGRDLGKDEVAQGQPLIGSAGKMLRKGFYQGVYHQQPSSPEDLQ 94 Query: 145 IMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS-PKILLFIGNKTKNFF 201 + + ++ P+ PPGN+ + E RP I + + + ++ +G + +F Sbjct: 95 SICDRAILTNTVPYKPPGNKAYTIKVKERFRPFIAQLLAIYWGGNQIVTLGTEAFKWF 152 >gi|269125994|ref|YP_003299364.1| Uracil-DNA glycosylase superfamily [Thermomonospora curvata DSM 43183] gi|268310952|gb|ACY97326.1| Uracil-DNA glycosylase superfamily [Thermomonospora curvata DSM 43183] Length = 197 Score = 35.5 bits (80), Expect = 8.1, Method: Composition-based stats. Identities = 21/150 (14%), Positives = 35/150 (23%), Gaps = 22/150 (14%) Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM-------------R 147 A ++ G P SG F+G GN L Sbjct: 23 PADG-TRLRVLFCGINPGLYSGASGHHFAGP-GNRFWPALHRSGFTDRLLTPAEQTELLS 80 Query: 148 TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207 + I+ + L+ E+ + +E P+ L G F Sbjct: 81 HGLGITNLVARTTARADELTPQELREGGRRLTALVERYRPRYLAVAGVTAYRTAFG---- 136 Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237 + + P +P L Sbjct: 137 ---RPKARIGPQPEPLGPAKVWVLPNPSGL 163 >gi|304409691|ref|ZP_07391311.1| phage SPO1 DNA polymerase domain-containing protein [Shewanella baltica OS183] gi|307304047|ref|ZP_07583800.1| phage SPO1 DNA polymerase domain-containing protein [Shewanella baltica BA175] gi|304352209|gb|EFM16607.1| phage SPO1 DNA polymerase domain-containing protein [Shewanella baltica OS183] gi|306912945|gb|EFN43368.1| phage SPO1 DNA polymerase domain-containing protein [Shewanella baltica BA175] Length = 232 Score = 35.5 bits (80), Expect = 8.2, Method: Composition-based stats. Identities = 19/137 (13%), Positives = 41/137 (29%), Gaps = 19/137 (13%) Query: 82 SLLRSFHDCHLCST----SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137 +LL + C LC + I + ++I G P + G PF +G L Sbjct: 3 ALLTKINACTLCQADLPLAPKPIL-QASSQARILIAGQAPGVKTHHKGIPFDDASGERLR 61 Query: 138 KML---QSIEIMRTQIHISMISPWHP---------PGNRNLSNIEMEICRPIIMRQIELI 185 L + I + P G++ ++ + Sbjct: 62 TWLNVTREQFYDPALFAIIPMGFCFPGSIEKNGKKQGDKPPRPECAATWHQALLA--LMP 119 Query: 186 SPKILLFIGNKTKNFFF 202 ++++ +G ++ Sbjct: 120 QIELIVILGQYAIDYHL 136 >gi|167534057|ref|XP_001748707.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772948|gb|EDQ86594.1| predicted protein [Monosiga brevicollis MX1] Length = 669 Score = 35.5 bits (80), Expect = 8.4, Method: Composition-based stats. Identities = 8/58 (13%), Positives = 13/58 (22%) Query: 29 DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRS 86 + P +E + E +D P AD A + Sbjct: 188 EAPVDELPAPADEPEAPVDELPAPADEPEAPADDPETPADEPEAPADEPEAPADEPEA 245 >gi|156552876|ref|XP_001600674.1| PREDICTED: similar to Thd1 [Nasonia vitripennis] Length = 953 Score = 35.5 bits (80), Expect = 8.6, Method: Composition-based stats. Identities = 31/216 (14%), Positives = 67/216 (31%), Gaps = 18/216 (8%) Query: 29 DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFH 88 D P+ + +Q + + ++A + E + F Sbjct: 104 DNPDVMSCGGAQPGLGTPAPTPPNSQLCSAQQQQQQAELAEAKKRAKTYKE-RKKHDRFD 162 Query: 89 DCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM-- 146 S + T D++IIG P G ++G GN K L + Sbjct: 163 GMPEEEVSKRVLPDHLTNDLDIIIIGINPGLFAAYKGHHYAGP-GNHFWKCLHLSGLTPE 221 Query: 147 -----------RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195 R I + + G+ +L+ E++ I++ ++ PKI +F G Sbjct: 222 PLTADDDYKLLRLGIGFTNMVARATKGSADLTRKEIKEGSHILLEKLRKYKPKIAVFNGK 281 Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231 F + + + + ++ + + + Sbjct: 282 LIYEVFSGKKEFGFGR---QPNLVDGTNTYMWVMPS 314 >gi|217973929|ref|YP_002358680.1| phage SPO1 DNA polymerase domain-containing protein [Shewanella baltica OS223] gi|217499064|gb|ACK47257.1| phage SPO1 DNA polymerase domain-containing protein [Shewanella baltica OS223] Length = 232 Score = 35.1 bits (79), Expect = 8.9, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 40/136 (29%), Gaps = 19/136 (13%) Query: 83 LLRSFHDCHLCST----SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDK 138 LL + C LC + I + ++I G P + G PF +G L Sbjct: 4 LLTKINACTLCQADLPLAPKPIL-QASSQARILIAGQAPGVKTHHKGIPFDDASGERLRT 62 Query: 139 ML---QSIEIMRTQIHISMISPWHP---------PGNRNLSNIEMEICRPIIMRQIELIS 186 L + I + P G++ ++ + Sbjct: 63 WLNVTREQFYDPALFAIIPMGFCFPGSIEKNGKKQGDKPPRPECAATWHQALLA--LMPQ 120 Query: 187 PKILLFIGNKTKNFFF 202 ++++ +G ++ Sbjct: 121 IELIVILGQYAIDYHL 136 >gi|325117189|emb|CBZ52741.1| conserved hypothetical protein [Neospora caninum Liverpool] Length = 1407 Score = 35.1 bits (79), Expect = 9.9, Method: Composition-based stats. Identities = 11/81 (13%), Positives = 20/81 (24%) Query: 32 NNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCH 91 +K + P + + + A L +LL + C Sbjct: 211 QRRLRKTQCEADKKGNFNPPPPRSSGPFPEGKNEAKRKDEEDAEERASLCALLAACRACP 270 Query: 92 LCSTSLSTICATQTEGQDLMI 112 L TS + + I Sbjct: 271 LSWTSEQGEPSFGAAAAGVCI 291 >gi|163852106|ref|YP_001640149.1| uracil-DNA glycosylase superfamily protein [Methylobacterium extorquens PA1] gi|163663711|gb|ABY31078.1| Uracil-DNA glycosylase superfamily [Methylobacterium extorquens PA1] Length = 208 Score = 35.1 bits (79), Expect = 9.9, Method: Composition-based stats. Identities = 22/196 (11%), Positives = 43/196 (21%), Gaps = 28/196 (14%) Query: 50 IQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD 109 + + P + A + +L++ R + Sbjct: 2 PASPDVPKSLRDPALLAARRAMVDVPHVRQLRAFARMIAA-ERGAAVPDPDPLDGGVAAR 60 Query: 110 LMIIGYTPSDSDNISGKPFSGKT-----GNMLDKMLQSIEIMRTQIHISMISPWHPP--- 161 L+++ TP S + F + L + L I R I PW Sbjct: 61 LLLLLETPGPSIGRT--GFVSRDNPTGTAANLFRFLAEAGIARRDTLIWNAVPWVIHAPG 118 Query: 162 --GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 L +++ G + + + Sbjct: 119 ALNRAPRRAEASAAAPYFAPLLALLPRLAVVVPAGRFARQA-----SAPLSALRPEL--- 170 Query: 220 CTPHSIIPTLATVHPQ 235 P +A HP Sbjct: 171 -------PVVAIPHPS 179 >gi|153000103|ref|YP_001365784.1| phage SPO1 DNA polymerase domain-containing protein [Shewanella baltica OS185] gi|151364721|gb|ABS07721.1| phage SPO1 DNA polymerase domain protein [Shewanella baltica OS185] Length = 232 Score = 35.1 bits (79), Expect = 9.9, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 40/136 (29%), Gaps = 19/136 (13%) Query: 83 LLRSFHDCHLCST----SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDK 138 LL + C LC + I + ++I G P + G PF +G L Sbjct: 4 LLTKINACTLCQADLPLAPKPIL-QASSQARILIAGQAPGVKTHHKGIPFDDASGERLRT 62 Query: 139 ML---QSIEIMRTQIHISMISPWHP---------PGNRNLSNIEMEICRPIIMRQIELIS 186 L + I + P G++ ++ + Sbjct: 63 WLNVTREQFYDPALFAIIPMGFCFPGSIEKNGKKQGDKPPRPECAATWHQALLA--LMPQ 120 Query: 187 PKILLFIGNKTKNFFF 202 ++++ +G ++ Sbjct: 121 IELIVILGQYAIDYHL 136 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.309 0.128 0.359 Lambda K H 0.267 0.0386 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,863,445,021 Number of Sequences: 14124377 Number of extensions: 60136686 Number of successful extensions: 295625 Number of sequences better than 10.0: 3372 Number of HSP's better than 10.0 without gapping: 2220 Number of HSP's successfully gapped in prelim test: 1152 Number of HSP's that attempted gapping in prelim test: 289567 Number of HSP's gapped (non-prelim): 4260 length of query: 261 length of database: 4,842,793,630 effective HSP length: 136 effective length of query: 125 effective length of database: 2,921,878,358 effective search space: 365234794750 effective search space used: 365234794750 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 79 (35.1 bits)