BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780743|ref|YP_003065156.1| putative uracil-DNA
glycosylase [Candidatus Liberibacter asiaticus str. psy62]
         (261 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done



>gi|209886081|ref|YP_002289938.1| uracil-DNA glycosylase, family 4 [Oligotropha carboxidovorans OM5]
 gi|209874277|gb|ACI94073.1| uracil-DNA glycosylase, family 4 [Oligotropha carboxidovorans OM5]
          Length = 275

 Score =  245 bits (624), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 80/270 (29%), Positives = 130/270 (48%), Gaps = 13/270 (4%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEK--------SIDSAIQ 51
           M S+R  +Q ++L    FY ++GV     +EP N  +                       
Sbjct: 4   MMSERPPTQHELLA---FYLEAGVDCALAEEPVNRLSETEAEPAPMRATPVRERPAPLPV 60

Query: 52  PITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLM 111
           P T++       ++ A  +A +A +L EL+ LL  F  C L  T+   +         +M
Sbjct: 61  PRTDVAPAPDVAIESARELAPQAKTLDELRGLLEVFDGCALKMTATRLVFGDGNPQARVM 120

Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEM 171
            +G  P   +++ G PF G++G +LD ML SI + RT  +I+ + PW PPGNR  S  E 
Sbjct: 121 FVGEAPGRDEDLQGIPFIGRSGKLLDLMLASIGLDRTSAYIANVIPWRPPGNREPSPHET 180

Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231
           ++C P I RQIEL+ P +L+ +G  +             ++ G+W +  T   +I  +AT
Sbjct: 181 QMCLPFIRRQIELVDPDVLVCLGKPSSQAVLELKDGIV-KSRGRWFDYNTGTRMIRAMAT 239

Query: 232 VHPQELIQYPLIKKNTWHALITLKKALKNL 261
            HP  L++ P+ K+ TW  L  +++AL  L
Sbjct: 240 FHPAYLLRQPIYKRMTWKDLRMIRRALAAL 269


>gi|115526415|ref|YP_783326.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas
           palustris BisA53]
 gi|115520362|gb|ABJ08346.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas
           palustris BisA53]
          Length = 273

 Score =  241 bits (615), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 85/274 (31%), Positives = 131/274 (47%), Gaps = 17/274 (6%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYES-----QRKEKSIDSAIQPIT 54
           M     L+  ++L    FY ++GV     DEP N  T ES      R       A  P+ 
Sbjct: 1   MMPDHNLTVRELLA---FYLEAGVDCALADEPVNRLTDESDSALVARPVARALPAAMPLA 57

Query: 55  NIRHIHSP-------LVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEG 107
            +     P        +  A   A+ A +L  L+ LL  F  C L ST+   + A     
Sbjct: 58  PMLAPAQPLAPAPDQAISSAREAARSAPTLEALRDLLERFDGCALKSTATRLVFADGNPQ 117

Query: 108 QDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLS 167
             +M++G  P   ++I G PF G++G +LD ML +I + R+Q++I+ + PW PPGNR  +
Sbjct: 118 ARIMLVGEAPGRDEDIEGLPFVGRSGKLLDLMLAAIGLDRSQVYIANVIPWRPPGNRTPT 177

Query: 168 NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227
             E +IC P I RQIEL+ P +L+ +GN +     +       +  G+W +  T    I 
Sbjct: 178 PQETQICLPFIKRQIELVDPDVLVTLGNPSTQAILSTREGIM-RTRGRWIDYDTGRRSIR 236

Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
            L T HP  L++ P  K+ +W  L  +  AL++L
Sbjct: 237 ALPTFHPAYLLRQPSYKRMSWQDLRAIATALESL 270


>gi|299134677|ref|ZP_07027869.1| phage SPO1 DNA polymerase-related protein [Afipia sp. 1NLS2]
 gi|298590487|gb|EFI50690.1| phage SPO1 DNA polymerase-related protein [Afipia sp. 1NLS2]
          Length = 271

 Score =  241 bits (614), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 79/271 (29%), Positives = 132/271 (48%), Gaps = 15/271 (5%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDS----------A 49
           M S+R  +  ++L    FY ++GV     +EP +  +        +              
Sbjct: 1   MISERPPTPHELLA---FYLEAGVDCALAEEPFDRLSEIEAEPAPAPRRIAPLTPAPALT 57

Query: 50  IQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD 109
             P T++       ++ A  +A KA +L EL+ LL +F  C L +T+   +         
Sbjct: 58  AAPQTDLAPAPDAAIESARELAPKAKTLEELRGLLEAFDGCALKATATKLVFGDGNPQAR 117

Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI 169
           +M +G  P   +++ G PF G++G +LD ML SI + RT+ +I+ + PW PPGNR+ S  
Sbjct: 118 VMFVGEAPGRDEDLQGIPFIGRSGKLLDLMLASIGLDRTKAYIANVIPWRPPGNRDPSPH 177

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E ++C P I RQIEL+ P I++ +G  +     +       +  G+W +  T    I  +
Sbjct: 178 ETQMCLPFIKRQIELVDPDIVVCLGKPSSQAVLDLKDGIM-RTRGRWFDYNTGTRTIRAM 236

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
           AT HP  L++ P+ K+ TW  L T++ AL  
Sbjct: 237 ATFHPAYLLRQPIYKRMTWKDLRTIQTALAA 267


>gi|27377634|ref|NP_769163.1| hypothetical protein bll2523 [Bradyrhizobium japonicum USDA 110]
 gi|27350779|dbj|BAC47788.1| bll2523 [Bradyrhizobium japonicum USDA 110]
          Length = 271

 Score =  240 bits (612), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 16/270 (5%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATY----------ESQRKEKSIDSA 49
           M  +   +  ++L    FY ++GV     +EP +               +  +     +A
Sbjct: 1   MIPEPAPTVRELLA---FYLEAGVDCALTEEPIDRLAEIAAPPPVPRAAAPVEAPRPVAA 57

Query: 50  IQPITNIRHIHSP-LVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQ 108
              I           +  A   A+ A +L  L+ L++ F  C L  T+   + A      
Sbjct: 58  PAVIRGEAAPAPDVAIASAREAARTAPTLEALRELMQGFEGCALKHTATRLVFADGNPQA 117

Query: 109 DLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSN 168
            +M +G  P   ++I G PF G++G +LD M+ +I + RT  +I+ + PW PPGNR  + 
Sbjct: 118 RIMFVGEAPGRDEDIEGLPFVGRSGKLLDLMIGAIGLNRTTAYIANVIPWRPPGNRTPTP 177

Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT 228
            E ++C P I RQIEL++P +L+ +GN +             +  G+W +  T    I  
Sbjct: 178 QETQVCLPFIQRQIELVNPDVLVTLGNPSTQTLLGTREGIM-RTRGRWFDYETAGRTIRA 236

Query: 229 LATVHPQELIQYPLIKKNTWHALITLKKAL 258
           L T HP  L++ P  K+  W  L  + K L
Sbjct: 237 LPTFHPAYLLRSPSYKRLAWQDLRAIAKVL 266


>gi|217976632|ref|YP_002360779.1| phage SPO1 DNA polymerase-related protein [Methylocella silvestris
           BL2]
 gi|217502008|gb|ACK49417.1| phage SPO1 DNA polymerase-related protein [Methylocella silvestris
           BL2]
          Length = 281

 Score =  239 bits (609), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 74/264 (28%), Positives = 121/264 (45%), Gaps = 13/264 (4%)

Query: 10  EQILTIALFYADSGVYWVFDE-PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQAD 68
           E ++ +  +YA+ GV    DE P++     +Q   +    AI        + +P    A 
Sbjct: 3   ESLIALLRWYAEMGVDIALDEIPHDRTRAPAQPPPERPAIAINAPPQAPAMSAPRQPVAI 62

Query: 69  SIAQK-----------ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117
           + A             A +L +L++ L +F  C L +T+   +      G  +M +G  P
Sbjct: 63  AGADSLERDAREAAAAAKTLEKLRAELLAFEGCGLKTTATQLVFGDGEAGAKVMFVGEAP 122

Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177
              ++  G PF G+ G +L++ML +I + R  ++I+ + PW PPGNR  + IE   C P 
Sbjct: 123 GADEDRQGVPFVGRAGQLLNRMLAAIGLDRRDVYIANVVPWRPPGNRTPTPIETAACLPF 182

Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237
             RQIEL+ PKIL+ +G  +             +  G+W       + I  LA  HP  L
Sbjct: 183 TRRQIELVGPKILVCLGLPSAQTLLGAK-DSMTRIRGRWLTYDCGGTPIRALAMFHPAYL 241

Query: 238 IQYPLIKKNTWHALITLKKALKNL 261
           ++ P  KK  W  L  L +AL ++
Sbjct: 242 LRQPGQKKLAWQDLRMLARALADM 265


>gi|85714248|ref|ZP_01045236.1| phage SPO1 DNA polymerase-related protein [Nitrobacter sp. Nb-311A]
 gi|85698695|gb|EAQ36564.1| phage SPO1 DNA polymerase-related protein [Nitrobacter sp. Nb-311A]
          Length = 281

 Score =  238 bits (606), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 78/280 (27%), Positives = 133/280 (47%), Gaps = 24/280 (8%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYE-------------------SQ 40
           MTS +  +  ++L    FY ++GV     DEP +  +                     + 
Sbjct: 1   MTSDQATTVRELLA---FYLEAGVDCALGDEPIDRLSTPDLARSDRPVATAAGIVPVAAV 57

Query: 41  RKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI 100
           R+     +   P   +       ++ A   A+ A SL  L++LL SF  C L  T+   +
Sbjct: 58  RQPPRQTATAAPRAGVAPPPDIAIESAREAARTAPSLEALRTLLESFDGCALKFTASRLV 117

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160
            A       LM +G  P   ++I+G PF G++G +L++M+ +I + R+ ++I+ + PW P
Sbjct: 118 FADGNPQARLMFVGEAPGRDEDIAGLPFVGRSGQLLNRMIAAIGLKRSDVYIANVIPWRP 177

Query: 161 PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220
           PGNR  +  E +IC P I RQIEL++P +L+ +GN +         +   +  GKW +  
Sbjct: 178 PGNRTPTPQETQICLPFIRRQIELVNPDVLVTLGNPSTQTLLQ-TREGIKRIRGKWFDYD 236

Query: 221 TPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
                I  +AT HP  L++ P  K+  W  L  + +AL++
Sbjct: 237 VGTRTIRAMATFHPAYLLRSPFDKRMAWLDLRAIARALED 276


>gi|319898574|ref|YP_004158667.1| phage SPO1 DNA polymerase-related protein [Bartonella clarridgeiae
           73]
 gi|319402538|emb|CBI76081.1| phage SPO1 DNA polymerase-related protein [Bartonella clarridgeiae
           73]
          Length = 283

 Score =  237 bits (604), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 91/275 (33%), Positives = 130/275 (47%), Gaps = 16/275 (5%)

Query: 2   TSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPI------- 53
            SK+I        +  FY +SGV     D P +     +   E  ++ A  P        
Sbjct: 10  MSKKIKDLILSEDLLNFYKESGVDTALTDVPIDRFNQPTTPLEPQLNQAYNPPHHKQISP 69

Query: 54  -------TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTE 106
                        ++     A  IA+ A +L ELKS L SF+DC L  T+ +T  +  T 
Sbjct: 70  TIKPYALPPYNPNNTQPALSAIEIAKNAQTLDELKSALLSFNDCSLKLTAKNTCFSDGTA 129

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL 166
           G  LM+IG  P   ++I G PF GK G +L+K+L SI + R  ++I+   PW PPGNR  
Sbjct: 130 GSPLMLIGEAPGREEDIQGIPFVGKAGILLNKILASIGLTRQNVYIANTIPWRPPGNRTP 189

Query: 167 SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII 226
           +  E+ +CRP I RQI L  P+IL+ +G     FF    +    +  GKW      +  I
Sbjct: 190 TPREVALCRPFIERQIFLAKPRILIALGGTATQFFTGVQSSII-RIRGKWLTYENENLKI 248

Query: 227 PTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
           P + T HP  L++ P  KK TW   + +K  L NL
Sbjct: 249 PVMPTFHPAYLLRTPSQKKLTWIDFLEVKNRLNNL 283


>gi|319403899|emb|CBI77485.1| phage SPO1 DNA polymerase-related protein [Bartonella rochalimae
           ATCC BAA-1498]
          Length = 273

 Score =  236 bits (602), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 87/274 (31%), Positives = 127/274 (46%), Gaps = 15/274 (5%)

Query: 2   TSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEK-------------SID 47
            S++         +  FY +SGV     D P +     +  + +             S  
Sbjct: 1   MSEKNKDVISNEDLLSFYKESGVDAALTDVPIDHFNQAASLEPQLNQAHDIPYYKKISPT 60

Query: 48  SAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEG 107
                +       +  V  A  IA+ A +L ELKS L SF+ C L  T+ +T  +  T G
Sbjct: 61  IKSHTLAPDNPDKTQPVLSAVEIAKSAQTLDELKSALLSFNGCSLKLTAKNTCFSDGTAG 120

Query: 108 QDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLS 167
             LM+IG  P   ++I G PF GK G +L+K+L SI + R  ++I+   PW PPGNR  +
Sbjct: 121 SPLMLIGEAPGREEDIQGIPFVGKAGILLNKILASIGLSRQNVYIANTIPWRPPGNRTPT 180

Query: 168 NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227
             E+ +CRP I RQI L  P+IL+ +G+    FF    +    +  GKW         IP
Sbjct: 181 PREVTLCRPFIERQILLAKPRILIALGSTAAQFFTGIQS-GIIRIRGKWLTYENEDLQIP 239

Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
            + T HP  L++ P  KK TW   + +K  L NL
Sbjct: 240 VMPTFHPAYLLRTPSQKKLTWMDFLEVKNRLNNL 273


>gi|319406910|emb|CBI80545.1| phage SPO1 DNA polymerase-related protein [Bartonella sp. 1-1C]
          Length = 273

 Score =  235 bits (599), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 86/274 (31%), Positives = 127/274 (46%), Gaps = 15/274 (5%)

Query: 2   TSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEK-------------SID 47
            S++         +  FY +SGV     D P +     +  + +             S  
Sbjct: 1   MSEKNKDVISNEDLLSFYKESGVDAALTDVPIDHFNQAASLEPQLNQAHDIPYHKQISPT 60

Query: 48  SAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEG 107
                +       +  +  A  IA+ A +L ELKS L SF+ C L  T+ +T  +  T G
Sbjct: 61  IKSHTLAPDNPDKTQPLLSAVEIAKSAQTLDELKSALLSFNGCSLKLTAKNTCFSDGTAG 120

Query: 108 QDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLS 167
             LM+IG  P   ++I G PF GK G +L+K+L SI + R  ++I+   PW PPGNR  +
Sbjct: 121 SPLMLIGEAPGREEDIQGIPFVGKAGILLNKILASIGLSRQNVYIANTIPWRPPGNRTPT 180

Query: 168 NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227
             E+ +CRP I RQI L  P+IL+ +G+    FF    +    +  GKW         IP
Sbjct: 181 PREVALCRPFIERQILLAKPRILIALGSTAAQFFTGIQS-GIIRIRGKWLTYENEDLQIP 239

Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
            + T HP  L++ P  KK TW   + +K  L NL
Sbjct: 240 VMPTFHPAYLLRTPSQKKLTWMDFLEVKNRLNNL 273


>gi|192289638|ref|YP_001990243.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas
           palustris TIE-1]
 gi|192283387|gb|ACE99767.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas
           palustris TIE-1]
          Length = 276

 Score =  234 bits (597), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 77/277 (27%), Positives = 120/277 (43%), Gaps = 21/277 (7%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVF----------DEPNNEATYESQRKEKSIDSAI 50
           MT     S  Q+L    FY D+GV              D P+  A   +      +  A+
Sbjct: 1   MTPDPAPSLRQLLA---FYLDAGVDCALAEGPVNRMLDDAPDPAAREAAPEPRPIVKPAL 57

Query: 51  QPITNIR-------HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICAT 103
                               +  A   A  A +L  L+ L++ F  C L +T+   + A 
Sbjct: 58  HAKPPPPLAFGAPPASPDAAIISAREAAATAPTLEALRELMQRFDGCALRATATQLVFAD 117

Query: 104 QTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGN 163
                 +M +G  P   ++I G PF G++G +LD ML +I + R  ++I+ + PW PPGN
Sbjct: 118 GNPQAKVMFVGEAPGRDEDIEGLPFVGRSGKLLDLMLAAIGLNRGNVYIANVIPWRPPGN 177

Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH 223
           R  +  E +IC P I RQIEL++P +L+ +GN +             +  G+W +  T  
Sbjct: 178 RTPTPQETQICLPFIRRQIELVNPDLLVTLGNPSTQALLGTRDGIM-RTRGRWFDYDTGT 236

Query: 224 SIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
             I  L T+HP  L++ P  K+  W  L  +  AL  
Sbjct: 237 RTIRALPTLHPAYLLRQPTYKRLAWQDLRAIATALAA 273


>gi|307941594|ref|ZP_07656949.1| DNA polymerase [Roseibium sp. TrichSKD4]
 gi|307775202|gb|EFO34408.1| DNA polymerase [Roseibium sp. TrichSKD4]
          Length = 307

 Score =  234 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 77/305 (25%), Positives = 132/305 (43%), Gaps = 46/305 (15%)

Query: 2   TSKRILSQEQILTIALFYADSGVYWVFDE-PNNEATYESQ-------------------- 40
                LS+ ++  +  FY  SGV    +E P +     ++                    
Sbjct: 1   MENNTLSKREVEALIDFYLASGVDGFLEEEPVDRFAAPAKPPVSLADFQSPATQTPNSPP 60

Query: 41  -------------------RKEKSIDSAIQPITNIRH-----IHSPLVQQADSIAQKACS 76
                              R  ++  ++  PI               +  A   A  A S
Sbjct: 61  NQRGQQPVSSAGPAAQQQGRPPQTPPASASPIPAAPQGGAVIPDQAAINSARERALTAQS 120

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L EL+ LL +F  C+L  T+ + + A       +M +G  P   ++I GKPF G++G +L
Sbjct: 121 LDELRELLGTFEGCNLRLTAKNLVFADGNPVAKVMFVGEAPGRDEDILGKPFVGRSGQLL 180

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           D+ML +I + R+  +I+ + PW PPGNR  +  E E+C+P I RQI L +P +L+F+G  
Sbjct: 181 DRMLTAIGLDRSSAYIANVVPWRPPGNRTPTPQETELCKPFIQRQITLANPDVLVFLGAA 240

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
           +     +       +  G+W    +    IP +AT HP  L++ PL K+ +W   + ++ 
Sbjct: 241 SAKSLLDVK-DGIRRLRGQWKEYDSGSRKIPCVATYHPAYLLRSPLEKRLSWRDFLAIRA 299

Query: 257 ALKNL 261
            L ++
Sbjct: 300 KLDDM 304


>gi|49474043|ref|YP_032085.1| DNA polymerase [Bartonella quintana str. Toulouse]
 gi|49239547|emb|CAF25904.1| DNA polymerase, bacteriophage type [Bartonella quintana str.
           Toulouse]
          Length = 275

 Score =  233 bits (595), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 94/276 (34%), Positives = 133/276 (48%), Gaps = 23/276 (8%)

Query: 3   SKRILSQEQILTIALFYADSGVYWVF-DEPNNEA---------------TYESQRKEKSI 46
           S+  +S E++L+   FY +SGV  V  D P +                 T   Q    +I
Sbjct: 5   SQYSISYEELLS---FYKESGVDAVLSDVPIDRFSQASSSTQELKKVIDTPHHQSVSPTI 61

Query: 47  DSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTE 106
                P+ +   I       A  IA+ A +L ELKS L  F+ C L  T+ ST  +  T 
Sbjct: 62  KQHSYPLPHSSTIQREP--SAIEIAKSANTLDELKSALLVFNGCSLKLTAKSTCFSDGTA 119

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL 166
           G  LMIIG  P   ++I G PF GK G +L+K+L SI + R  ++I+   PW PPGNR  
Sbjct: 120 GSPLMIIGEAPGREEDIQGIPFVGKAGMLLNKILASIGLTRKNVYIANTIPWRPPGNRTP 179

Query: 167 SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS-I 225
           +  E+ +CRP I RQI L +P+IL+ +G      F         +  GKW    +  +  
Sbjct: 180 TPREVALCRPFIERQIHLANPRILIALGGVAMQ-FLTGSQNGIIRTRGKWCTYESEDNIK 238

Query: 226 IPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
           IP + T HP  L++ P  KK TW   + +K  L NL
Sbjct: 239 IPVMPTFHPAYLLRTPSQKKLTWRDFLEVKNRLNNL 274


>gi|86748208|ref|YP_484704.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas
           palustris HaA2]
 gi|86571236|gb|ABD05793.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas
           palustris HaA2]
          Length = 277

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 80/275 (29%), Positives = 126/275 (45%), Gaps = 19/275 (6%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNE---------ATYESQRKEKSIDSAI 50
           MT +   S +Q+L    FY ++GV     DEP N          A  ++           
Sbjct: 1   MTPEPAPSLKQLLA---FYLEAGVDCALTDEPINRMLDDETATPAIADAPVARADTIRPP 57

Query: 51  QPITNI-----RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQT 105
            P                +  A   A  A +L  L++L+  F  C L ST+   + A   
Sbjct: 58  APRPTALPGVAPPSPEAAIVSAREAAATAPTLEALRALMEQFEGCALRSTATRLVFADGN 117

Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRN 165
               LM++G  P   ++I G PF G++G +LD ML +I + R+Q++I+ + PW PPGNR 
Sbjct: 118 PQARLMLVGEAPGREEDIEGLPFVGRSGKLLDLMLAAIGLDRSQVYIANVIPWRPPGNRT 177

Query: 166 LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI 225
            +  E +IC P I RQIEL++P IL+ +GN +     +       +  G+W +      +
Sbjct: 178 PTPQETQICLPFIKRQIELVNPAILVTLGNPSTQTLLS-TRDGITRTRGRWFDYDNGTRM 236

Query: 226 IPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
           I  + T+HP  L++ P  K+  W  L  +  AL  
Sbjct: 237 IRAMPTLHPAYLLRQPTYKRLAWQDLRAIATALAA 271


>gi|121602683|ref|YP_988758.1| uracil-DNA glycosylase [Bartonella bacilliformis KC583]
 gi|120614860|gb|ABM45461.1| uracil-DNA glycosylase, family 4 [Bartonella bacilliformis KC583]
          Length = 275

 Score =  233 bits (594), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 95/271 (35%), Positives = 134/271 (49%), Gaps = 19/271 (7%)

Query: 6   ILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEK-----SIDSAIQPITNIRHI 59
            +S E++L+   FY +SG      DEP N        ++K      I S  Q    I+  
Sbjct: 8   PISYEELLS---FYKESGADAALADEPINRFNQSPSSEQKLKQTCDIPSHQQTPPTIKLN 64

Query: 60  HSPL--------VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLM 111
             PL           A  +A+ A +L ELKS L +F  C L  T+ +T  +  T G  LM
Sbjct: 65  APPLNHPDTTQHALSAIEMAKNAKTLDELKSALLAFDGCSLKMTAKNTCFSDGTAGSPLM 124

Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEM 171
           +IG  P   ++I G PF GK G +L+K+L SI + R  ++I+   PW PPGNR  +  EM
Sbjct: 125 LIGEAPGREEDIQGIPFVGKAGILLNKILASIGLTRENVYIANTVPWRPPGNRTPTAREM 184

Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS-IIPTLA 230
            +CRP I RQI+L +P+IL+ +G     FF    +    +  GKW    T     IP + 
Sbjct: 185 ALCRPFIERQIQLANPRILVALGGTAVQFFTGTQSGIV-RIRGKWLTYETEDKVKIPVMP 243

Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALKNL 261
           T HP  L++ P  KK TW   + +K  L NL
Sbjct: 244 TFHPAYLLRTPSQKKLTWIDFLEVKNRLNNL 274


>gi|163867968|ref|YP_001609172.1| phage SPO1 DNA polymerase-related protein [Bartonella tribocorum
           CIP 105476]
 gi|161017619|emb|CAK01177.1| phage SPO1 DNA polymerase-related protein [Bartonella tribocorum
           CIP 105476]
          Length = 279

 Score =  233 bits (593), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 87/274 (31%), Positives = 130/274 (47%), Gaps = 23/274 (8%)

Query: 7   LSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSID---------SAIQPITNI 56
           +S E++L+   FY +SG   V  D P +        ++KS            +      +
Sbjct: 9   ISYEELLS---FYKESGADAVLADLPIDRFKQSFSSEKKSTPVVSVSHHQQRSPTTSPTV 65

Query: 57  RHIHSPL--------VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQ 108
           +  H PL           A   A+ A +L ELKS L +F+ C L  T+ +T  +  T G 
Sbjct: 66  KLDHQPLHNSRAIQNEPAAIESAKSAKTLDELKSALLAFNGCSLKLTAKNTCFSDGTAGS 125

Query: 109 DLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSN 168
            LM+IG  P   ++I G PF GK G +L+K+L SI + R  ++I+   PW PPGNR  + 
Sbjct: 126 PLMLIGEAPGREEDIQGVPFVGKAGMLLNKILASIGLTRNNVYIANTIPWRPPGNRTPTP 185

Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS-IIP 227
            E+ +CRP I R I L  P++L+ +G      F         +  GKW    +  +  IP
Sbjct: 186 REIALCRPFIERHIYLARPRVLIALGGVAAQ-FLTGSQSGIIRTRGKWHIYESEDNIKIP 244

Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
            + T HP  L++ P  KK TW   + +K  L NL
Sbjct: 245 VMPTFHPAYLLRTPSQKKLTWIDFLEVKNRLDNL 278


>gi|90425831|ref|YP_534201.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas
           palustris BisB18]
 gi|90107845|gb|ABD89882.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas
           palustris BisB18]
          Length = 277

 Score =  233 bits (593), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 79/277 (28%), Positives = 128/277 (46%), Gaps = 20/277 (7%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYE---------------SQRKEK 44
           MT +   +  ++L    FY ++GV     DEP N    +               S + + 
Sbjct: 1   MTPEPRPNARELLA---FYLEAGVDCALMDEPVNRLLDDIAPEPARPPAEPRLVSPQPQP 57

Query: 45  SIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQ 104
           +   A+             +  A   A+ A SL  L+ LL +F  C L +T+   + A  
Sbjct: 58  ATPRAVPTAAAPALAPDAAILSAREAARTAPSLQALRELLAAFDGCALKATATQLVFADG 117

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
                +M++G  P   ++I G PF G++G +LD+ML SI + R+ ++I+ + PW PPGNR
Sbjct: 118 NPQARIMLVGEAPGREEDIEGLPFVGRSGKLLDRMLASIGLDRSTVYIANVIPWRPPGNR 177

Query: 165 NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS 224
             +  E + C P   RQIEL+ P +L+ +GN +             +  G+W +  T   
Sbjct: 178 TPTPQETQTCLPFTQRQIELVDPDLLVTLGNPSTQTLLATREGIM-KTRGRWVDYDTGSR 236

Query: 225 IIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
            I  L T HP  L++ P  K+  W  L  + KAL++L
Sbjct: 237 RIRALPTFHPAYLLRSPSYKRMAWQDLRAIAKALEDL 273


>gi|240850173|ref|YP_002971566.1| phage SPO1 DNA polymerase-related protein [Bartonella grahamii
           as4aup]
 gi|240267296|gb|ACS50884.1| phage SPO1 DNA polymerase-related protein [Bartonella grahamii
           as4aup]
          Length = 276

 Score =  232 bits (592), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 85/271 (31%), Positives = 126/271 (46%), Gaps = 20/271 (7%)

Query: 7   LSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSA-----IQPITNIRHIH 60
           +S E++     FY +SG   V  + P N     +  + K I         Q    ++  H
Sbjct: 9   ISYEEL---LNFYKESGADAVLTNFPINRFKQSACSESKLISVVNISHNQQTSPTVKLDH 65

Query: 61  SPL---------VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLM 111
            PL            A   A  A +L ELKS L +F+ C L  T+ +T  +  T G  LM
Sbjct: 66  RPLHNSRGAIQNEPTAIESANNAKTLDELKSALLAFNGCSLKLTAKNTCFSDGTAGSPLM 125

Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEM 171
           +IG  P   ++I G PF GK G +L+K+L SI + R  ++I+   PW PPGNR  +  E+
Sbjct: 126 LIGEAPGREEDIQGIPFVGKAGMLLNKILASIGLTRNNVYIANTIPWRPPGNRTPTPREV 185

Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS-IIPTLA 230
            +CRP I R I L  P++L+ +G                +  GKW    +  +  IP + 
Sbjct: 186 ALCRPFIERHIYLARPRVLIALGGIAAQ-LLTGSQNGIIRTRGKWHIYESEDNIKIPVMP 244

Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALKNL 261
           T HP  L++ P  KK TW   + +K  L +L
Sbjct: 245 TFHPAYLLRTPSQKKLTWIDFLEVKNRLDSL 275


>gi|319405336|emb|CBI78954.1| phage SPO1 DNA polymerase-related protein [Bartonella sp. AR 15-3]
          Length = 273

 Score =  232 bits (592), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 88/274 (32%), Positives = 125/274 (45%), Gaps = 15/274 (5%)

Query: 2   TSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEK-------------SID 47
            SK+         +  FY +SGV     D P +        + +             S  
Sbjct: 1   MSKKDKDVILNEDLLSFYKESGVDTALTDVPIDHFNQAIPLEPQLNQACDISYHQKISPT 60

Query: 48  SAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEG 107
                        +  V  A  IA+ A +L ELKS L SF+ C L  T+ +T  +  T G
Sbjct: 61  IKSHTPLLNNPDKTQPVLSAVEIAKNAQTLDELKSALLSFNGCLLKLTAQNTCFSDGTAG 120

Query: 108 QDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLS 167
             LM+IG  P   ++I G PF GK G +L+K+L SI + R  ++I+   PW PPGNR  +
Sbjct: 121 SPLMLIGEAPGREEDIQGIPFVGKAGILLNKILASIGLTRQNVYIANTIPWRPPGNRTPT 180

Query: 168 NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227
             E+ +CRP I RQI L  P+IL+ +G+    FF    +    +  GKW         IP
Sbjct: 181 PREIALCRPFIERQILLAKPRILIALGSTAVQFFTGIQS-GIIRIRGKWLTYENEDLKIP 239

Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
            + T HP  L++ P  KK TW   + +K  L NL
Sbjct: 240 VMPTFHPAYLLRTPSQKKLTWIDFLEVKNRLNNL 273


>gi|13476397|ref|NP_107967.1| hypothetical protein mll7705 [Mesorhizobium loti MAFF303099]
 gi|14027158|dbj|BAB54112.1| mll7705 [Mesorhizobium loti MAFF303099]
          Length = 291

 Score =  232 bits (591), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 83/291 (28%), Positives = 132/291 (45%), Gaps = 31/291 (10%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPITNIRHI 59
           MT+    S   I  I  FYA +GV     D P N     + R  +   + + P    +  
Sbjct: 1   MTAASPNSPTDIADILAFYASAGVDEALEDAPVNRFAEAAPRPVERAPAPVAPPREEKAP 60

Query: 60  HSPLVQQ---ADSIAQKAC-------------------------SLHELKSLLRSFHDCH 91
             P       A  +                              +L EL+  + +F  C+
Sbjct: 61  ERPAAPPGLDASKVPDAPPARSSVAAVPDEAQAALARQLATTATTLDELRQHMAAFDGCN 120

Query: 92  LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH 151
           L +T+ + + A       +M++G  P   ++I G PF G++G +LD+ML +I + RT ++
Sbjct: 121 LKATAKNLVFADGNPDAAVMLVGEAPGRDEDIEGLPFVGRSGRLLDRMLAAIGLDRTSVY 180

Query: 152 ISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQ 211
           I+ + PW PPGNR  +  E EICRP I RQIEL++PK+L+ +G  +     N  ++   +
Sbjct: 181 IANVIPWRPPGNRTPTPHETEICRPFIERQIELVNPKVLVNLGGPSAKTLLN-TSEGILR 239

Query: 212 NLGKWSNLCTPHSI-IPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
             G W    T   I IP + T+HP  L++ P  KK  W   + +K  L+ L
Sbjct: 240 LRGNWRVHTTASGIAIPAMPTLHPAYLLRTPAHKKLAWRDFLEVKAKLRAL 290


>gi|91975690|ref|YP_568349.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas
           palustris BisB5]
 gi|91682146|gb|ABE38448.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas
           palustris BisB5]
          Length = 282

 Score =  232 bits (591), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 82/281 (29%), Positives = 126/281 (44%), Gaps = 24/281 (8%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNE-----------ATYESQRKEK---- 44
           MT +   S +Q+L    FY ++GV     DEP N            A             
Sbjct: 1   MTPEPAPSLQQLLA---FYLEAGVDCALNDEPINRLLDDAIAVPIQAETSEAAPRPDTEK 57

Query: 45  ----SIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI 100
               +     QP   I  +    +  A   A  A SL  L++L+  F  C L ST+   +
Sbjct: 58  IRSLAPRPRAQPAGAIPPLPEAAIVSAREAAATAPSLDALRALMEQFDGCALRSTATRLV 117

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160
            A       +M++G  P   ++I G PF G++G +LD ML +I + R++++I+ + PW P
Sbjct: 118 FADGNPKASIMLVGEAPGREEDIEGLPFVGRSGKLLDLMLAAIGLDRSKVYIANVIPWRP 177

Query: 161 PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220
           PGNR  +  E +IC P I RQIEL+ P IL+ +GN +     +       +  G+W +  
Sbjct: 178 PGNRTPTPQETQICLPFIRRQIELVDPAILVTLGNPSTQALLSTRDGIM-RTRGRWFDYH 236

Query: 221 TPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
                I  L T+HP  L++ P  K+  W  L  +  A   L
Sbjct: 237 NGARTIRALPTLHPAYLLRQPTYKRLAWQDLRAIATAFAAL 277


>gi|316932577|ref|YP_004107559.1| phage SPO1 DNA polymerase-like protein [Rhodopseudomonas palustris
           DX-1]
 gi|315600291|gb|ADU42826.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas
           palustris DX-1]
          Length = 275

 Score =  231 bits (590), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 77/274 (28%), Positives = 120/274 (43%), Gaps = 20/274 (7%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPI------ 53
           M    + S  Q+L    FY D+GV     D P N    E+        +           
Sbjct: 1   MIPDPVPSLRQLLA---FYLDAGVDCALADAPVNRMLDEAPAPAGHEATEPSRAVKPALQ 57

Query: 54  ---------TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQ 104
                              +  A   A  A +L  L+ L++ F  C L  T+   + A  
Sbjct: 58  AQPAPPPPRATQPATPDAAIVSAREAAATAPTLEALRDLMQQFDGCALRGTAKQLVFADG 117

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
                LM++G  P   ++I G PF G++G +LD ML +I + R++++I+ + PW PPGNR
Sbjct: 118 NPQAKLMLVGEAPGRDEDIEGLPFVGRSGKLLDLMLAAIGLDRSKVYIANVIPWRPPGNR 177

Query: 165 NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS 224
             +  E +IC P I RQIEL++P +L+ +GN +             +  G+W +  T   
Sbjct: 178 TPTPQETQICLPFIKRQIELVNPDLLVTLGNPSTQALLGTRDGIM-RTRGRWFDYDTGTR 236

Query: 225 IIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
            I  L T+HP  L++ P  K+  W  L  +  AL
Sbjct: 237 TIRALPTLHPAYLLRQPTYKRLAWQDLRAIATAL 270


>gi|154251174|ref|YP_001411998.1| phage SPO1 DNA polymerase-like protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154155124|gb|ABS62341.1| phage SPO1 DNA polymerase-related protein [Parvibaculum
           lavamentivorans DS-1]
          Length = 290

 Score =  231 bits (590), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 75/284 (26%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 3   SKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHS 61
           S   ++ E+   +  FY ++GV   + DEP N      +    +     +     R I +
Sbjct: 4   SGPDMTPEEAAALLSFYVEAGVTDALGDEPVNRYALADEAARSAPVPLARAPEAPRTIRA 63

Query: 62  PLVQQ-------------------------ADSIAQKACSLHELKSLLRSFHDCHLCSTS 96
               +                         A   A +  +L EL+  L +F  C L  T+
Sbjct: 64  DPRGEMAPPPAARVAAPAAIPLEDAQAAESAQIAAARCNTLEELRQTLAAFEGCPLRYTA 123

Query: 97  LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156
            + + A       +M++G  P   +++ G PF G++G +LD+ML +I + RT ++I+   
Sbjct: 124 KNLVFADGNPQARIMLVGEAPGRDEDLQGLPFVGRSGQLLDRMLAAIGLDRTSVYIANTL 183

Query: 157 PWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKW 216
           PW PPGNR  +  E  IC P I R IEL++PK+LL +G  +       D     +  G+W
Sbjct: 184 PWRPPGNRTPTPAEHAICMPFIERHIELMAPKVLLLLGGVSAKQLLRTDTGIM-RLRGRW 242

Query: 217 SNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
           +        IP L T+HP  L++ P  K+  W  L++ +  L  
Sbjct: 243 TTARIGECDIPALPTLHPAYLLRQPAQKRLAWRDLMSFRAWLDE 286


>gi|319408256|emb|CBI81909.1| phage SPO1 DNA polymerase-related protein [Bartonella
           schoenbuchensis R1]
          Length = 276

 Score =  231 bits (588), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 86/272 (31%), Positives = 135/272 (49%), Gaps = 20/272 (7%)

Query: 6   ILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAI-------------- 50
           ++S E++L+   FY +SGV     D P +  +  +  ++KS  +                
Sbjct: 8   LISYEELLS---FYKESGVDAALNDTPIDRFSQSAILEQKSKQAVDIIHHKQTSQPIKLH 64

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
               +     +     A  +A+ A +L ELKS L +F+ C L  T+ +T  +  T G  L
Sbjct: 65  NKPPHNLDNKTHDTLSAIEMAKNAHTLDELKSALLAFNGCSLKLTAKNTCFSDGTAGSPL 124

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170
           M+IG  P   ++I G PF GK G +L+K+L SI + R  ++I+   PW PPGNR  +  E
Sbjct: 125 MLIGEAPGRDEDIQGIPFVGKAGMLLNKILASIGLTRKNVYIANTIPWRPPGNRTPTPRE 184

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS-IIPTL 229
           + +CRP I RQIEL +P++L+ +G     F          +  GKW    + ++  IP +
Sbjct: 185 VALCRPFIERQIELANPRVLIALGGTAAQFLTGAQG-GIIRIRGKWQIYESANNVKIPVM 243

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
            T HP  L++ P  KK TW   + +K  L NL
Sbjct: 244 PTFHPAYLLRTPSQKKLTWMDFLEVKDRLNNL 275


>gi|269958378|ref|YP_003328165.1| putative DNA glycosylase [Anaplasma centrale str. Israel]
 gi|269848207|gb|ACZ48851.1| putative DNA glycosylase [Anaplasma centrale str. Israel]
          Length = 289

 Score =  230 bits (587), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 68/261 (26%), Positives = 122/261 (46%), Gaps = 11/261 (4%)

Query: 10  EQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPI--------TNIRHIHS 61
           E++L +  FY ++GV  V +E   EA   +   ++      +                 +
Sbjct: 23  EELLEVLRFYHENGVDCVLEEGGLEARTPAVVSQEQDVGTSRAGRLSEQGADKGESQFST 82

Query: 62  PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121
             V  A  IA     L EL++ + SF  C +   +++T+ +       +M+IG  P  ++
Sbjct: 83  DWVTAARKIAGGCSDLAELRAAIESFEGCEIKKAAMNTVFSDGNPDARIMLIGEAPGSNE 142

Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ 181
           +  G+PF G +G +LDKML +I + R   +IS  + W PPGNR  ++ E+EIC+P + + 
Sbjct: 143 DREGRPFCGASGMLLDKMLAAIGLNRKSTYISNTTFWRPPGNRRPTDFELEICKPFVEKH 202

Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL--ATVHPQELIQ 239
           I LI+P IL+ +G+       N   +   +  G++     P    P       HP  L++
Sbjct: 203 IALIAPSILVLVGSTACCALLN-TPESISRLRGRFHEYTNPFLAHPVTTAVIFHPAYLLR 261

Query: 240 YPLIKKNTWHALITLKKALKN 260
            P+ K+  W  L  ++  ++ 
Sbjct: 262 QPMQKRLAWEDLKMIRAYIEQ 282


>gi|260462363|ref|ZP_05810571.1| phage SPO1 DNA polymerase-related protein [Mesorhizobium
           opportunistum WSM2075]
 gi|259031857|gb|EEW33125.1| phage SPO1 DNA polymerase-related protein [Mesorhizobium
           opportunistum WSM2075]
          Length = 298

 Score =  230 bits (587), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 82/292 (28%), Positives = 133/292 (45%), Gaps = 33/292 (11%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPITNIRHI 59
           MT+    S  +I  I  FYA +GV     D P N     + R  +   + +      +  
Sbjct: 8   MTAAPN-SPTEIADILAFYASAGVDEALEDAPVNRFAEAAPRPVERAPAPLPSPREDKTP 66

Query: 60  HSPLVQQ-----------------------------ADSIAQKACSLHELKSLLRSFHDC 90
             P                                 A  +A  A +L EL+  + +F  C
Sbjct: 67  ERPAASSGLDASKVPDAPVRTVSATAAVPDEAQAALARQMATSASTLEELRQHMAAFEGC 126

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150
           +L +T+ + + A       +M++G  P   ++I G PF G++G +LD+ML +I + R+ +
Sbjct: 127 NLKATAKNLVFADGNPQAAVMLVGEAPGRDEDIEGLPFVGRSGRLLDRMLAAIGLDRSSV 186

Query: 151 HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210
           +I+ + PW PPGNR  +  E EICRP I RQIEL++PK+L+ +G  +     N  ++   
Sbjct: 187 YIANVIPWRPPGNRTPTPHETEICRPFIERQIELLNPKVLVNLGGPSAKTLLN-TSEGIL 245

Query: 211 QNLGKWSNLCT-PHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
           +  G W    T     IP + T+HP  L++ P  KK  W   + +K  L+ L
Sbjct: 246 RLRGNWRAHTTASGVTIPAMPTLHPAYLLRTPAHKKLAWRDFLEVKAKLRAL 297


>gi|190571317|ref|YP_001975675.1| putative DNA glycosylase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|190357589|emb|CAQ55030.1| putative DNA glycosylase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
          Length = 257

 Score =  230 bits (587), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 71/256 (27%), Positives = 130/256 (50%), Gaps = 8/256 (3%)

Query: 7   LSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQ 66
           ++ E +  +  FY + GV     E   E   E++R  +S     +         S  + +
Sbjct: 1   MNNEDL-ELLKFYHEVGVDCTLTEGEEEKKVENERAAQSSVIEQKK----AMFPSDWIIE 55

Query: 67  ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126
           A  +A +  S+ EL+S ++SF  C +  T+ +T+ +       +M++G  P  ++++ G 
Sbjct: 56  ARKLASECGSVDELRSAVKSFEGCEIKKTATNTVFSDGNPNAKIMLVGEAPGANEDLKGI 115

Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186
           PF G +G +LDKML +I + RT+++IS    W PPGNR  +++E+++CRP + + I L+ 
Sbjct: 116 PFCGASGMLLDKMLGAINLDRTKVYISNTVFWRPPGNRKPTDLELDMCRPFVEKHIALVL 175

Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATVHPQELIQYPLIK 244
           P+IL+F+G        + + +      GK+      +    I T A  HP  L++ P  K
Sbjct: 176 PQILIFVGGIACYSLLD-NTKTISNLRGKFHTYTNQYLSHAITTAAIFHPAYLLRQPAQK 234

Query: 245 KNTWHALITLKKALKN 260
           +  W  L  +++ L N
Sbjct: 235 RLAWEDLKKIREYLDN 250


>gi|110633263|ref|YP_673471.1| phage SPO1 DNA polymerase-related protein [Mesorhizobium sp. BNC1]
 gi|110284247|gb|ABG62306.1| phage SPO1 DNA polymerase-related protein [Chelativorans sp. BNC1]
          Length = 285

 Score =  230 bits (585), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 85/284 (29%), Positives = 133/284 (46%), Gaps = 25/284 (8%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQ---------RKEKSIDSAI 50
           MTS   L    I  +  FY+++G      +E  +                R  +S  +A 
Sbjct: 1   MTSTTPLDFAGIRELLAFYSEAGADEALWEEAQDRFAEAKASAQTFSETVRPAQSDAAAP 60

Query: 51  QPITNIRHIHSPLVQQ-------------ADSIAQKACSLHELKSLLRSFHDCHLCSTSL 97
           QP           +               A  +A++A +L ELK +L  F  C+L  T+ 
Sbjct: 61  QPENRATQPKPAPISAQPAAVPDEAQAAHAREVARQARTLDELKEILAGFEGCNLRLTAK 120

Query: 98  STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP 157
           + + A      DLM++G  P   +++ G PF G++G +L++ML +I   R+  +I+ + P
Sbjct: 121 NLVFADGNPQADLMLVGEAPGRDEDLQGLPFVGRSGQLLNRMLAAIGRDRSTAYIANVIP 180

Query: 158 WHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS 217
           W PPGNR+ S +E EICRP I R IEL++PK+L+ +GN +             +  G WS
Sbjct: 181 WRPPGNRDPSPLETEICRPFIERHIELVAPKLLVTLGNPSTKLLLGTQTGIM-RLRGTWS 239

Query: 218 NLCT-PHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
              T     IPT+ T+HP  L++ P  KK  W   + +K  L N
Sbjct: 240 VHRTAGGLEIPTMPTLHPAYLLRNPAHKKLAWRDFLAVKMRLAN 283


>gi|49475280|ref|YP_033321.1| DNA polymerase [Bartonella henselae str. Houston-1]
 gi|49238086|emb|CAF27293.1| DNA polymerase, bacteriophage type [Bartonella henselae str.
           Houston-1]
          Length = 275

 Score =  230 bits (585), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 88/270 (32%), Positives = 136/270 (50%), Gaps = 19/270 (7%)

Query: 7   LSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSA-----IQPITNIRHIH 60
           ++ E++L+   FY +SGV     D P +  +  +  ++KS          Q   +I+  +
Sbjct: 9   ITYEELLS---FYKESGVDTALTDLPIDRFSQSASLEKKSTQVVKISHNQQTSPSIKLDN 65

Query: 61  SPLVQQ--------ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMI 112
            PL           A   A+ A +L ELKS L +F+ C L  T+ +T  +  T G  LM+
Sbjct: 66  HPLSNSTIIQGELSAIESAKNANTLDELKSALLAFNGCSLKLTAKNTCFSDGTAGSPLML 125

Query: 113 IGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEME 172
           IG  P   ++I G PF GK G +L+K+L SI + R  ++I+   PW PPGNR  +  E+ 
Sbjct: 126 IGEAPGREEDIQGIPFVGKAGMLLNKILASIGLTRNSVYIANTIPWRPPGNRTPTPREVA 185

Query: 173 ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS-IIPTLAT 231
           +CRP I RQI L +P+IL+ +G      F         +  GKW    + ++  IP + T
Sbjct: 186 LCRPFIERQIYLANPRILIALGGVATQ-FLTGAQNGIIRTRGKWLTYKSENNIKIPVMPT 244

Query: 232 VHPQELIQYPLIKKNTWHALITLKKALKNL 261
            HP  L++ P  KK TW   + +K  L +L
Sbjct: 245 FHPAYLLRTPSQKKLTWLDFLEVKNRLDSL 274


>gi|56417232|ref|YP_154306.1| hypothetical protein AM1237 [Anaplasma marginale str. St. Maries]
 gi|222475596|ref|YP_002564013.1| hypothetical protein AMF_934 [Anaplasma marginale str. Florida]
 gi|56388464|gb|AAV87051.1| hypothetical protein AM1237 [Anaplasma marginale str. St. Maries]
 gi|222419734|gb|ACM49757.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
          Length = 290

 Score =  229 bits (584), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 69/260 (26%), Positives = 124/260 (47%), Gaps = 11/260 (4%)

Query: 11  QILTIALFYADSGVYWVFDE--------PNNEATYESQRKEKSIDSAIQPITNIRHIHSP 62
           ++L +  FY ++GV  V +E        P      +     +    + Q         + 
Sbjct: 25  ELLEVLKFYHENGVDCVLEEDGPGTCAPPVAALQEQEGCTLQVGSPSEQMDAGASQFSTD 84

Query: 63  LVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDN 122
            V  A SIA K  +L EL+  + +F  C +   +++T+ +       +M+IG  P  +++
Sbjct: 85  WVAAAKSIADKCGTLAELREAVEAFEGCEIKKAAMNTVFSDGNPNAKIMLIGEAPGSNED 144

Query: 123 ISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQI 182
             G+PF G +G +LDKML +I + R   +IS  + W PPGNR  ++ E+EIC+P + + I
Sbjct: 145 REGRPFCGASGMLLDKMLAAIGLDRKSTYISNTTFWRPPGNRRPTDFELEICKPFVEKHI 204

Query: 183 ELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATVHPQELIQY 240
            LI+P IL+ +G+       +   +   +  G++     P     I T    HP  L++ 
Sbjct: 205 ALIAPSILVLVGSTACCSLLS-TPESISRLRGRFHEYANPFLAHPIKTAVIFHPAYLLRQ 263

Query: 241 PLIKKNTWHALITLKKALKN 260
           P+ K+  W  L  ++  ++N
Sbjct: 264 PMQKRLAWEDLKMIRSHIEN 283


>gi|254475928|ref|ZP_05089314.1| uracil-DNA glycosylase [Ruegeria sp. R11]
 gi|214030171|gb|EEB71006.1| uracil-DNA glycosylase [Ruegeria sp. R11]
          Length = 275

 Score =  229 bits (584), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 64/260 (24%), Positives = 114/260 (43%), Gaps = 10/260 (3%)

Query: 3   SKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHS 61
            +  L       +  +  + G    + D P N    E+++ + +   A  P    + +  
Sbjct: 23  MESALDYHSARALLAWQIELGATDAICDAPVNRYELEARQPKPTARQAEAPPPKPKEV-- 80

Query: 62  PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121
             V+ A  IA+    L  LK+ L  F  C L   + + + +    G  +M+IG  P   +
Sbjct: 81  DPVEVARDIARGVRDLAGLKAALAQFEHCDLRKGARNLVFSDGKPGARVMVIGEAPGRDE 140

Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMR 180
           ++ G+PF G+ G +LD+ML +I + R    +I+ + PW PP NR+    E+ +  P + R
Sbjct: 141 DLEGRPFVGRAGQLLDRMLAAIGLSRQDNVYITNVLPWRPPQNRDPLPAEIAMMTPFLER 200

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
            + L +P IL+ +GN + +           +  G W          P +   HP  L++ 
Sbjct: 201 HVALANPDILIAMGNISCDALMGKRG--ITRLRGTWGEAWGK----PVMPMFHPAYLLRQ 254

Query: 241 PLIKKNTWHALITLKKALKN 260
           PL K+  W  L+ +K  L  
Sbjct: 255 PLQKRAAWSDLLDIKSRLDA 274


>gi|254995400|ref|ZP_05277590.1| hypothetical protein AmarM_05693 [Anaplasma marginale str.
           Mississippi]
 gi|255003587|ref|ZP_05278551.1| hypothetical protein AmarPR_05168 [Anaplasma marginale str. Puerto
           Rico]
 gi|255004718|ref|ZP_05279519.1| hypothetical protein AmarV_05513 [Anaplasma marginale str.
           Virginia]
          Length = 279

 Score =  229 bits (584), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 69/260 (26%), Positives = 124/260 (47%), Gaps = 11/260 (4%)

Query: 11  QILTIALFYADSGVYWVFDE--------PNNEATYESQRKEKSIDSAIQPITNIRHIHSP 62
           ++L +  FY ++GV  V +E        P      +     +    + Q         + 
Sbjct: 14  ELLEVLKFYHENGVDCVLEEDGPGTCAPPVAALQEQEGCTLQVGSPSEQMDAGASQFSTD 73

Query: 63  LVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDN 122
            V  A SIA K  +L EL+  + +F  C +   +++T+ +       +M+IG  P  +++
Sbjct: 74  WVAAAKSIADKCGTLAELREAVEAFEGCEIKKAAMNTVFSDGNPNAKIMLIGEAPGSNED 133

Query: 123 ISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQI 182
             G+PF G +G +LDKML +I + R   +IS  + W PPGNR  ++ E+EIC+P + + I
Sbjct: 134 REGRPFCGASGMLLDKMLAAIGLDRKSTYISNTTFWRPPGNRRPTDFELEICKPFVEKHI 193

Query: 183 ELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATVHPQELIQY 240
            LI+P IL+ +G+       +   +   +  G++     P     I T    HP  L++ 
Sbjct: 194 ALIAPSILVLVGSTACCSLLS-TPESISRLRGRFHEYANPFLAHPIKTAVIFHPAYLLRQ 252

Query: 241 PLIKKNTWHALITLKKALKN 260
           P+ K+  W  L  ++  ++N
Sbjct: 253 PMQKRLAWEDLKMIRSHIEN 272


>gi|83591606|ref|YP_425358.1| phage SPO1 DNA polymerase-like protein [Rhodospirillum rubrum ATCC
           11170]
 gi|83574520|gb|ABC21071.1| Phage SPO1 DNA polymerase-related protein [Rhodospirillum rubrum
           ATCC 11170]
          Length = 315

 Score =  228 bits (581), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 73/278 (26%), Positives = 123/278 (44%), Gaps = 28/278 (10%)

Query: 11  QILTIALFYADSGVY-WVFDEPNNEATYESQRK-----------------EKSIDSAIQP 52
            +  +  +Y ++GV   V D P +      +                     +  +   P
Sbjct: 35  DLAGLLGWYLEAGVDLAVGDSPLDRYALSERAPVPRVAPPAARPPTPAASRPTGRTPGGP 94

Query: 53  ------ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTE 106
                   +     +   + A  +A +A SL +L++ L SF  C L  T+  T+ A    
Sbjct: 95  RIEDGGPNDEPPTQAESQRAASFLAAQAGSLEDLRTALDSFRSCALRRTATQTVFADGCP 154

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRN 165
              +MIIG  P   ++  G+PF G +G +LD ML SI + R    +I+ + PW PPGNR 
Sbjct: 155 QSGMMIIGEAPGADEDRLGRPFVGVSGKLLDAMLGSIGLDRADSCYITNVVPWRPPGNRK 214

Query: 166 LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH-- 223
            +  E+ +C P + R I L+ P+++L +G       F   ++   +  G W +   P   
Sbjct: 215 PTADEVALCLPFLERHIALVRPRLILAVGGLAAQALFG-RSEGITRLRGHWHDYEGPGLD 273

Query: 224 SIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
             +P LAT HP  L++ P  K+  W  L+ L++ L +L
Sbjct: 274 RSVPVLATFHPAYLLRTPAQKRLAWRDLLALRQRLDSL 311


>gi|319784543|ref|YP_004144019.1| phage SPO1 DNA polymerase-related protein [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317170431|gb|ADV13969.1| phage SPO1 DNA polymerase-related protein [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 296

 Score =  228 bits (581), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 83/293 (28%), Positives = 134/293 (45%), Gaps = 33/293 (11%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDE-PNNEATYESQRKEKSIDSAIQPITNIRHI 59
           MT+    ++  I  +  FYA  GV    +E P N     + +  +    A         +
Sbjct: 4   MTAASPTNRPDIADLLAFYASVGVDEALEEQPVNRFAEVAPKPMERAPIAAPSGGTAAPL 63

Query: 60  HSPLV--------QQADSIAQK----------------------ACSLHELKSLLRSFHD 89
            S  V          A  +A+                       A +L EL+  + +F  
Sbjct: 64  RSTTVSRGEAGDRANAPPVARSPSATTAVPDEAQAALARQLATTATTLDELRQHMAAFEG 123

Query: 90  CHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQ 149
           C+L +T+ + + A       +M++G  P   ++I G PF G++G +LD+ML +I + RT 
Sbjct: 124 CNLKATAKNLVFADGNPEAAVMLVGEAPGRDEDIEGLPFVGRSGRLLDRMLAAIGLDRTS 183

Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209
            +I+ + PW PPGNR  +  E EICRP I RQIEL++PK+L+ +G  +     N  ++  
Sbjct: 184 AYIANVIPWRPPGNRTPTPHETEICRPFIERQIELVNPKVLINLGGPSAKTLLN-TSEGI 242

Query: 210 YQNLGKWSNLCTPHSI-IPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
            +  G W    T   I IP + T+HP  L++ P  KK  W   + +K  L+ L
Sbjct: 243 LRLRGNWRVHTTASGIAIPAMPTLHPAYLLRTPSHKKLAWRDFLEVKAKLRAL 295


>gi|92118685|ref|YP_578414.1| phage SPO1 DNA polymerase-related protein [Nitrobacter hamburgensis
           X14]
 gi|91801579|gb|ABE63954.1| phage SPO1 DNA polymerase-related protein [Nitrobacter hamburgensis
           X14]
          Length = 289

 Score =  228 bits (581), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 79/285 (27%), Positives = 129/285 (45%), Gaps = 28/285 (9%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYE--------------------- 38
           MTS    +  +++    FY ++GV     D P +  +                       
Sbjct: 1   MTSDHAPTVRELMA---FYLEAGVDCALGDGPVDRLSAPDLAAPDLAAPDRPVVAPAGTG 57

Query: 39  --SQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTS 96
                K         P   I       ++ A   A+ A SL  L++LL +F  C L  T+
Sbjct: 58  PVPAGKPPDRAVTAAPRVGIAPPPEIAIESAREAARTAPSLEALRTLLDTFDGCALKFTA 117

Query: 97  LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156
              + A       LM +G  P   ++I G PF G++G +L++M+ +I + R+ ++I+ + 
Sbjct: 118 SRLVFADGNPHARLMFVGEAPGRDEDIEGLPFVGRSGQLLNRMIAAIGLTRSDVYIANVI 177

Query: 157 PWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKW 216
           PW PPGNR  +  E +IC P I RQIEL++P +L+ +GN +         +   +  GKW
Sbjct: 178 PWRPPGNRTPTPQETQICLPFIRRQIELVNPDVLVTLGNPSTQTLL-PTREGIMKTRGKW 236

Query: 217 SNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
            +  T    I  +AT HP  L++ P  K+  W  L  + KALK++
Sbjct: 237 FDYDTDTRTIRAMATFHPAYLLRSPSSKRMAWLDLRAIAKALKDM 281


>gi|182678993|ref|YP_001833139.1| phage SPO1 DNA polymerase-related protein [Beijerinckia indica
           subsp. indica ATCC 9039]
 gi|182634876|gb|ACB95650.1| phage SPO1 DNA polymerase-related protein [Beijerinckia indica
           subsp. indica ATCC 9039]
          Length = 290

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 77/281 (27%), Positives = 124/281 (44%), Gaps = 31/281 (11%)

Query: 10  EQILTIALFYADSGVYWVFDE-PNNEATYESQRKEKSIDSAIQPITNIRH---------- 58
           + +  +  +YA  GV    DE P++     +    +   S  Q     R           
Sbjct: 3   DSLTALLRWYAAMGVDIALDEAPHDRFAESAAMASRRAPSVPQDDRQARADHPPPSSVSP 62

Query: 59  -------------------IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLST 99
                                  L Q A+  A  A +L EL+  L +F  C L +T+   
Sbjct: 63  SRQQAPAPRQLPGFAQEALSQEALSQNAEEAAASAKTLDELREKLDAFQGCGLKNTATQL 122

Query: 100 ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH 159
           + A       +MIIG  P   ++  G+PF G+ G +LD+ML ++++ RTQ++I+ I PW 
Sbjct: 123 VFADGNPNSSVMIIGEAPGADEDRQGRPFVGRAGQLLDRMLAAVDLDRTQVYIANIVPWR 182

Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
           PPGNR  + +E+  C P I RQIEL+SP+ ++ +G  +         +   +  G+W + 
Sbjct: 183 PPGNRTPTPLEIAACLPFIRRQIELVSPRFIVCLGAPSAQTLLGTK-EAITRLRGRWRDW 241

Query: 220 CTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
                 I  L  +HP  L++ P  KK  W     L KAL++
Sbjct: 242 SCGGKTIHVLPMLHPAYLLRQPAEKKRAWADWRLLAKALRD 282


>gi|146339065|ref|YP_001204113.1| putative DNA polymerases [Bradyrhizobium sp. ORS278]
 gi|146191871|emb|CAL75876.1| putative DNA polymerases [Bradyrhizobium sp. ORS278]
          Length = 273

 Score =  227 bits (578), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 76/275 (27%), Positives = 122/275 (44%), Gaps = 20/275 (7%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRK---------------EK 44
           M  + +    Q+L    FY ++GV     D+P N                          
Sbjct: 2   MNPEPLPDVRQLLA---FYLEAGVDCALADDPINRLVEPDAAPAPVAAAARQAAPQPGRS 58

Query: 45  SIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQ 104
              + I P           +  A   A+ A +L  L+ LL +F  C L  T+   + A  
Sbjct: 59  PAPAIISPRGEPPPAPDAAIASARESARTAPTLQALRELLETFDGCALKQTASRLVFADG 118

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
                +M++G  P   ++I G PF G++G +LD+M+ +I + RT+++I+ + PW PPGNR
Sbjct: 119 NPEARVMLVGEAPGRDEDIEGLPFVGRSGKLLDRMIGAIGLDRTKVYIANVIPWRPPGNR 178

Query: 165 NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS 224
             +  E +IC P I RQIEL+ P +L+ +GN +             +  GKW +  T   
Sbjct: 179 TPTPQETQICLPFIRRQIELVDPDVLVTLGNPSTQALLGTTEGIM-RTRGKWRDYDTGKR 237

Query: 225 IIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
            I  +AT HP  L++ P  K+ +W  L  +   L 
Sbjct: 238 TIRAIATFHPAYLLRSPSYKRLSWQDLRAIATVLA 272


>gi|58584375|ref|YP_197948.1| Uracil-DNA glycosylase [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
 gi|58418691|gb|AAW70706.1| Uracil-DNA glycosylase [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
          Length = 266

 Score =  226 bits (576), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 131/259 (50%), Gaps = 8/259 (3%)

Query: 9   QEQILTIALFYADSGVYWVFDEPNNEATYES-----QRKEKSIDSAIQPITNIRHIHSPL 63
           +++ L +  FY + G+     E N E   E        +  +I + +Q         S  
Sbjct: 2   RDEDLELLKFYYEVGIDCTLTEGNEEKKVEKEKNSKAIQSPTIQAEVQKKEQQSMFPSDW 61

Query: 64  VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123
           + +A  +A K  S+ EL+S ++SF  C +  TS +T+ +   +   +M++G  P  ++++
Sbjct: 62  IIEARKLASKCNSMDELRSAVKSFEGCEIKKTSTNTVFSDGNQSAKIMLVGEAPGANEDL 121

Query: 124 SGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE 183
            G PF G +G +LDKML +I + RT+++IS    W PPGNR  +++E+++CRP + + I 
Sbjct: 122 KGIPFCGASGMLLDKMLSAINLDRTKVYISNTVFWRPPGNRKPTDLELDMCRPFVEKHIA 181

Query: 184 LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS--IIPTLATVHPQELIQYP 241
           LISP IL+ +G  +     + + +      G++      +    I T    HP  L++ P
Sbjct: 182 LISPHILILVGGISCYSLLD-NTKTISTLRGRFHTYTNQYLSYSITTAVIFHPAYLLRQP 240

Query: 242 LIKKNTWHALITLKKALKN 260
             K+  W  L  +++ L +
Sbjct: 241 AQKRLAWEDLKKIREYLNS 259


>gi|58698049|ref|ZP_00372973.1| phage SPO1 DNA polymerase domain protein [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|225629945|ref|YP_002726736.1| uracil-DNA glycosylase-like protein [Wolbachia sp. wRi]
 gi|58535406|gb|EAL59481.1| phage SPO1 DNA polymerase domain protein [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|225591926|gb|ACN94945.1| uracil-DNA glycosylase-like protein [Wolbachia sp. wRi]
          Length = 270

 Score =  225 bits (574), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 71/265 (26%), Positives = 128/265 (48%), Gaps = 13/265 (4%)

Query: 7   LSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIR--------- 57
           +S E +  +  FY + GV     E   E   ES+          +   + R         
Sbjct: 1   MSNEDL-ELLKFYHEVGVDCTLMEGEEEKKLESKEPSVIQTGTQKKDADTRWGDTKDGKD 59

Query: 58  HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117
              S  + +A  +A K  S+ EL+S ++SF  C +  T+ +T+ +       +M++G  P
Sbjct: 60  MFPSDWIIEARKLAGKCGSVDELRSAVKSFEGCEIKKTATNTVFSDGNPNAKIMLVGEAP 119

Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177
             ++++ G PF G +G +LDKML +I + RT+++IS    W PPGNR  +++E+++CRP 
Sbjct: 120 GANEDLQGIPFCGASGMLLDKMLNAINLDRTKVYISNTVFWRPPGNRKPTDLELDMCRPF 179

Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATVHPQ 235
           + + I L+SP+IL+ +G        ++         G++      +  + I T A  HP 
Sbjct: 180 VEKHIALVSPQILILVGGIACYSLLDSTK-TISNLRGRFHTYTNQYLSNSITTAAIFHPA 238

Query: 236 ELIQYPLIKKNTWHALITLKKALKN 260
            L++ P  K+  W     +++ L N
Sbjct: 239 YLLRQPAQKRLAWEDSKKIREYLDN 263


>gi|75676780|ref|YP_319201.1| phage SPO1 DNA polymerase-related protein [Nitrobacter winogradskyi
           Nb-255]
 gi|74421650|gb|ABA05849.1| phage SPO1 DNA polymerase-related protein [Nitrobacter winogradskyi
           Nb-255]
          Length = 301

 Score =  225 bits (572), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 79/294 (26%), Positives = 123/294 (41%), Gaps = 38/294 (12%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPITNIRHI 59
           MTS    +  ++L    FY ++GV     DEP +  +             I         
Sbjct: 1   MTSDHSTTVRELLA---FYLEAGVDCALGDEPVDRLSTPDLAPPDLAPPNIATPALAPGR 57

Query: 60  HSPLVQQADSIAQK---------------------------------ACSLHELKSLLRS 86
                  A  IA                                   A SL  L++LL  
Sbjct: 58  PIAAKTGAAPIAATRQPSRQTATAPPRAGIAPPPDVAAEHAREAARTAPSLEALRALLEG 117

Query: 87  FHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM 146
           F  C L  T+   + A       LM +G  P   ++I G PF G++G +L++M+ +I + 
Sbjct: 118 FEGCALKFTASRLVFADGNPQARLMFVGEAPGRDEDIEGLPFVGRSGQLLNRMIAAIGLK 177

Query: 147 RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206
           R  ++I+ + PW PPGNR  +  E +IC P I RQIEL++P +L+ +GN +         
Sbjct: 178 RGDVYIANVIPWRPPGNRTPTPQETQICLPFIRRQIELVNPDVLVTLGNPSTQTLLQTRE 237

Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
               +  G+W +  T    I  +AT HP  L++ P  K+  WH L  + KAL++
Sbjct: 238 GIM-KTRGRWFDYDTGARTIRAMATFHPAYLLRSPSYKRMAWHDLRAIAKALED 290


>gi|163759107|ref|ZP_02166193.1| phage SPO1 DNA polymerase-related protein [Hoeflea phototrophica
           DFL-43]
 gi|162283511|gb|EDQ33796.1| phage SPO1 DNA polymerase-related protein [Hoeflea phototrophica
           DFL-43]
          Length = 313

 Score =  225 bits (572), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 75/307 (24%), Positives = 133/307 (43%), Gaps = 50/307 (16%)

Query: 4   KRILSQEQILTIALFYADSGVYWVFDE--------------------------PNNEATY 37
              +  + +  +  FYA+SGV  V +E                          P     +
Sbjct: 5   ASDIPPQALAALLGFYAESGVDGVCEEVAIDRFAQSAEMAQSRKQNASRNTQAPVTAGAF 64

Query: 38  ESQRKEKSIDSAIQPIT-----------------------NIRHIHSPLVQQADSIAQKA 74
             Q +  S     +P                          +      + + A ++A+ A
Sbjct: 65  GEQSRSASDGPGSRPSPAMAAQRAPAASGASAGTTPAQASQLTVPGEAVFKDARALAESA 124

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            ++ EL++ L  F  C+L  ++ S + A      ++M IG  P   +++ G PF G+ G 
Sbjct: 125 STIDELRAALEGFGGCNLRHSAKSLVFADGNPEAEVMFIGEAPGREEDLQGTPFVGRAGQ 184

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           +LD+ML +I + R   +I+ + PW PPGNR  +  E+E+CRP I R + L +PKI++ +G
Sbjct: 185 LLDRMLAAIGLNRQTAYITNMIPWRPPGNRTPAPHEIELCRPFIERHVTLAAPKIVVMLG 244

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
           N       N D        G W    +  + IP + T+HP  L++ P  K+  W  L++L
Sbjct: 245 NVATKSLLNTDKGILS-LRGDWMEYTSGTTSIPAMPTLHPAYLLRNPAQKRLVWADLLSL 303

Query: 255 KKALKNL 261
           ++ L+++
Sbjct: 304 QQRLEDM 310


>gi|58616770|ref|YP_195969.1| hypothetical protein ERGA_CDS_00430 [Ehrlichia ruminantium str.
           Gardel]
 gi|58416382|emb|CAI27495.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel]
          Length = 263

 Score =  225 bits (572), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 63/265 (23%), Positives = 124/265 (46%), Gaps = 12/265 (4%)

Query: 7   LSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQ 66
           +S   +L    F+ ++GV  + +   N+ +  +Q    ++      +       S L + 
Sbjct: 1   MSDSDLLEALKFFYENGVDCILETE-NQVSISNQDTYLNLKGGNNDVEEYNMERSSLKED 59

Query: 67  ADS--------IAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPS 118
           A++         A++  +L EL+S +  F  C + + + +T+ +       +M+IG  P 
Sbjct: 60  AEAYYLLKAQSAAEQCSTLEELRSAIEYFDGCDIKNLATNTVFSDGNPNAKMMLIGEAPG 119

Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPII 178
            +++I G PF G +G +L+KML++I   R  ++IS    W PPGNR  ++ E+ +CRP +
Sbjct: 120 ANEDIHGIPFCGNSGMLLNKMLEAIGFNRNTVYISNSVFWRPPGNRRPTDFEIAVCRPFV 179

Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATVHPQE 236
            + I L+ PK+L+ +G+       ++      +  G++           I T    HP  
Sbjct: 180 EKHIALVMPKMLVLVGSTACYAILDSK-NPISKLRGRFHMYNNRFLQHSITTGIIFHPSY 238

Query: 237 LIQYPLIKKNTWHALITLKKALKNL 261
           L++ P+ K+  W  L  ++     L
Sbjct: 239 LLRQPMQKRIAWEDLKQIRDCFNTL 263


>gi|288962809|ref|YP_003453103.1| DNA polymerase bacteriophage-type [Azospirillum sp. B510]
 gi|288915075|dbj|BAI76559.1| DNA polymerase bacteriophage-type [Azospirillum sp. B510]
          Length = 285

 Score =  224 bits (571), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 74/283 (26%), Positives = 132/283 (46%), Gaps = 28/283 (9%)

Query: 6   ILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQ------------- 51
           ++    IL    ++ D G      DEP + A   S+   ++    +              
Sbjct: 1   MIDVCDILDALRWHTDIGCDEAIGDEPTDWAALASRPATRAPSPGVAPAAGAAIARAPAA 60

Query: 52  -------------PITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLS 98
                           +     S    QA + A +A +L  L++ LRSF  C L +T+++
Sbjct: 61  TRPPASARPAAPFASPDQPLGASEAGIQARARAGEAGTLEALEAALRSFDGCPLKATAMN 120

Query: 99  TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158
           T+ A       +M+IG  P + ++  GKPF G +G +LD+ML  I + R  ++IS I PW
Sbjct: 121 TVFADGNPQAPVMLIGEAPGEDEDRQGKPFVGVSGKLLDRMLAQIGLDRGTVYISNILPW 180

Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218
            PPGNR+ +  E+  C P + R +EL+ PK+L+ +G  +     N  A+   +  G+W +
Sbjct: 181 RPPGNRSPTQAEVAACLPFLERHVELVRPKLLVALGGVSAKTLLN-RAEGITRLRGQWRS 239

Query: 219 LCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
                + IP +  +HP  L++ P+ K+  W  ++ L++ +  +
Sbjct: 240 YEAAGTPIPLMPMLHPAYLLRNPIAKREAWRDMLALRQKIDEV 282


>gi|304393614|ref|ZP_07375542.1| DNA polymerase [Ahrensia sp. R2A130]
 gi|303294621|gb|EFL88993.1| DNA polymerase [Ahrensia sp. R2A130]
          Length = 293

 Score =  224 bits (571), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 77/282 (27%), Positives = 123/282 (43%), Gaps = 37/282 (13%)

Query: 14  TIALFYADSGVYWVF-DEPNNE------------------ATYESQRKEKSIDSAIQPIT 54
            +  +YA++GV     DEP +                    T E Q ++  +      + 
Sbjct: 9   ELLEWYAEAGVDIALADEPVDRFAEAAQAFEAVKNKKAVSKTDERQTQQAPVADQQSNLR 68

Query: 55  NIRHIHS-----------------PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL 97
           +     +                   V+QA  +A KA +L EL+  +R F  C+L   + 
Sbjct: 69  DQSRTKAATPPPAAAPARPTIPDGAAVEQAKQLASKATTLDELRDAIRGFEGCNLRYQAK 128

Query: 98  STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP 157
             + A       +M+IG  P   ++  G PF GK+G +LD+ML +I + R  ++IS + P
Sbjct: 129 QMVFADGNPEASVMLIGEAPGRDEDAQGLPFVGKSGQLLDRMLAAIGLDRKSVYISNVIP 188

Query: 158 WHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS 217
           W P GNR  +  E+EICRP I R IEL +PK+L+ +G  +                G+W 
Sbjct: 189 WRPAGNRTPTPAEIEICRPFIERHIELAAPKLLVLVGGSSAKAML-RTTDGITSVRGRWK 247

Query: 218 NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
           ++       P L   HP  L++ P  K+  W  L+ LK  L+
Sbjct: 248 DVKIGEREWPALPMFHPAYLLRNPAQKRRAWQDLLMLKARLE 289


>gi|42520066|ref|NP_965981.1| phage SPO1 DNA polymerase-related protein [Wolbachia endosymbiont
           of Drosophila melanogaster]
 gi|42409803|gb|AAS13915.1| phage SPO1 DNA polymerase-related protein [Wolbachia endosymbiont
           of Drosophila melanogaster]
          Length = 273

 Score =  224 bits (570), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 69/268 (25%), Positives = 125/268 (46%), Gaps = 16/268 (5%)

Query: 7   LSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH------ 60
           +S + +  +  FY + GV     E   E   ES+   +                      
Sbjct: 1   MSNKDL-ELLKFYHEVGVDCTLTEGEEEKKLESKESVQPSVIQTGTKKKDADTRWGDTKD 59

Query: 61  ------SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIG 114
                 S  + +A  +A K  S+ EL+S + SF  C +  T+ +T+ +       +M++G
Sbjct: 60  GKDMFPSDWIIEARKLASKCNSVDELRSAVESFEGCEIKKTATNTVFSDGNPNAKVMLVG 119

Query: 115 YTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC 174
             P  ++++ G PF G +G +LDKML +I + RT+++IS    W PPGNR  +++E+++C
Sbjct: 120 EAPGANEDLQGIPFCGASGMLLDKMLNAINLDRTKVYISNTVFWRPPGNRKPTDLELDMC 179

Query: 175 RPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATV 232
           RP + + + L SP+IL+ +G        ++         G++      +  + I T A  
Sbjct: 180 RPFVEKHVALASPQILILVGGIACYSLLDSTK-TISNLRGRFHTYTNQYLSNSITTAAIF 238

Query: 233 HPQELIQYPLIKKNTWHALITLKKALKN 260
           HP  L++ P  K+  W  L  +++ L N
Sbjct: 239 HPAYLLRQPAQKRLAWEDLKKIREYLDN 266


>gi|99034822|ref|ZP_01314738.1| hypothetical protein Wendoof_01000436 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 273

 Score =  224 bits (570), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 69/268 (25%), Positives = 126/268 (47%), Gaps = 16/268 (5%)

Query: 7   LSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH------ 60
           +S + +  +  FY + GV     E   E   ES+   +                      
Sbjct: 1   MSNKDL-ELLKFYHEVGVDCTLTEGEEEKKLESKESVQPSVIQTGTKKKDADTRWGDTKD 59

Query: 61  ------SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIG 114
                 S  + +A  +A K  S+ EL+S + SF  C +  T+ +T+ +       +M++G
Sbjct: 60  GKDMFPSDWIIEARKLASKCNSVDELRSAVESFEGCEIKKTATNTVFSDGNPNAKVMLVG 119

Query: 115 YTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC 174
             P  ++++ G PF G +G +LDKML +I + RT+++IS    W PPGNR  +++E+++C
Sbjct: 120 EAPGANEDLQGIPFCGASGMLLDKMLNAINLDRTKVYISNTVFWRPPGNRKPTDLELDMC 179

Query: 175 RPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATV 232
           RP + + + L+SP+IL+ +G        ++         G++      +  + I T A  
Sbjct: 180 RPFVEKHVALVSPQILILVGGIACYSLLDSTK-TISNLRGRFHTYTNQYLSNSITTAAIF 238

Query: 233 HPQELIQYPLIKKNTWHALITLKKALKN 260
           HP  L++ P  K+  W  L  +++ L N
Sbjct: 239 HPAYLLRQPAQKRLAWEDLKKIREYLDN 266


>gi|57238783|ref|YP_179919.1| hypothetical protein Erum0530 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58578708|ref|YP_196920.1| hypothetical protein ERWE_CDS_00440 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|57160862|emb|CAH57764.1| putative uracil DNA glycosylase [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58417334|emb|CAI26538.1| Conserved hypothetical protein [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 263

 Score =  224 bits (570), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 63/265 (23%), Positives = 124/265 (46%), Gaps = 12/265 (4%)

Query: 7   LSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQ 66
           +S   +L    F+ ++GV  + +   N+ +  +Q    ++      +       S L + 
Sbjct: 1   MSDSDLLEALKFFYENGVDCILETE-NQVSISNQDTYLNLKGGNNDVEEYNMERSSLKED 59

Query: 67  ADS--------IAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPS 118
           A++         A++  +L EL+S +  F  C + + + +T+ +       +M+IG  P 
Sbjct: 60  AEAYYLLKAQSAAEQCSTLEELRSAIEYFDGCDIKNLATNTVFSDGNPNAKMMLIGEAPG 119

Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPII 178
            +++I G PF G +G +L+KML++I   R  ++IS    W PPGNR  ++ E+ +CRP +
Sbjct: 120 ANEDIHGIPFCGTSGMLLNKMLEAIGFNRNTVYISNSVFWRPPGNRRPTDFEIAVCRPFV 179

Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATVHPQE 236
            + I L+ PK+L+ +G+       ++      +  G++           I T    HP  
Sbjct: 180 EKHIALVMPKMLVLVGSTACYAILDSK-NPISKLRGRFHMYNNRFLQHSITTGIIFHPSY 238

Query: 237 LIQYPLIKKNTWHALITLKKALKNL 261
           L++ P+ K+  W  L  ++     L
Sbjct: 239 LLRQPMQKRIAWEDLKQIRDCFNTL 263


>gi|39934111|ref|NP_946387.1| phage SPO1 DNA polymerase-like protein [Rhodopseudomonas palustris
           CGA009]
 gi|39647959|emb|CAE26479.1| possible phage DNA polymerases [Rhodopseudomonas palustris CGA009]
          Length = 276

 Score =  224 bits (570), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 76/269 (28%), Positives = 120/269 (44%), Gaps = 21/269 (7%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQR--------------KEKS 45
           MT     S  Q+L    FY D+GV     ++P N    ++                K   
Sbjct: 1   MTPDPAPSLRQLLA---FYLDAGVDCALAEDPINRMLDDAPEPAAREAAPEPRPIVKPAL 57

Query: 46  IDSAIQPITNIRHIHSP--LVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICAT 103
                 P+       SP   +  A   A  A +L  L+ L++ F  C L +T+   + A 
Sbjct: 58  HAKPPPPLAFGAPPASPDAAIISAREAAATAPTLEALRELMQRFDGCALRATATQLVFAD 117

Query: 104 QTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGN 163
                 ++ +G  P   ++I G PF G++G +LD ML +I + R  ++I+ + PW PPGN
Sbjct: 118 GNPQAKVVFVGEAPGRDEDIEGLPFVGRSGKLLDLMLAAIGLNRGNVYIANVIPWRPPGN 177

Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH 223
           R  +  E +IC P I RQIEL++P +L+ +GN +             +  G+W +  T  
Sbjct: 178 RTPTPQETQICLPFIRRQIELVNPDLLVTLGNPSTQALLGTRDGIM-RTRGRWFDYDTGT 236

Query: 224 SIIPTLATVHPQELIQYPLIKKNTWHALI 252
             I  L T+HP  L++ P  K+  W  L 
Sbjct: 237 RTIRALPTLHPAYLLRQPTYKRLAWQDLR 265


>gi|148253838|ref|YP_001238423.1| putative DNA polymerase [Bradyrhizobium sp. BTAi1]
 gi|146406011|gb|ABQ34517.1| putative DNA polymerase [Bradyrhizobium sp. BTAi1]
          Length = 274

 Score =  224 bits (570), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 76/276 (27%), Positives = 123/276 (44%), Gaps = 21/276 (7%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRK----------------E 43
           M  + +    Q+L    FY ++GV     DEP N                          
Sbjct: 2   MIPEPLPDVRQLLA---FYLETGVDCALADEPINRLVEPEAAPAPAAAVARPAAASPAGR 58

Query: 44  KSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICAT 103
               + I P           +  A   A  A +L  L+ LL +F  C L  T+   + A 
Sbjct: 59  LPAPAIIPPRGEPPPPPEAAIASAREAALTAPTLEALRELLENFDGCALKQTATRLVFAD 118

Query: 104 QTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGN 163
                 +M++G  P   ++I G PF G++G +LD+M+ +I + R++++I+ + PW PPGN
Sbjct: 119 GNPQARIMLVGEAPGRDEDIEGLPFVGRSGKLLDRMIGAIGLDRSKVYIANVIPWRPPGN 178

Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH 223
           R  +  E +IC P I RQIEL+ P +L+ +GN +             ++ GKW +  T  
Sbjct: 179 RTPTPQETQICLPFIRRQIELVDPDVLVTLGNPSTQAILGTTEGIM-RSRGKWRDYDTGK 237

Query: 224 SIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
             I  +AT HP  L++ P  K+ +W  L  + K + 
Sbjct: 238 RTIRAIATFHPAYLLRSPSYKRLSWQDLRAIAKVMA 273


>gi|163732348|ref|ZP_02139794.1| uracil-DNA glycosylase, C-terminal [Roseobacter litoralis Och 149]
 gi|161394646|gb|EDQ18969.1| uracil-DNA glycosylase, C-terminal [Roseobacter litoralis Och 149]
          Length = 261

 Score =  223 bits (569), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 66/267 (24%), Positives = 121/267 (45%), Gaps = 14/267 (5%)

Query: 1   MTSKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYE--SQRKEKSIDSAIQPITNIR 57
           M  +        L +  +  + G    + + P N       ++ ++K   + + P     
Sbjct: 1   MAMESS-DFHHALALLDWQIELGATEAIGETPVNRYELPDKAKVQKKPGSAVMTPGAATV 59

Query: 58  HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117
                 V+ A   A  A  L +L++ L +F  C L   + + + +    G  +MIIG  P
Sbjct: 60  AEKIDGVEAARKAALGAQDLEQLRAALAAFDHCDLKRGARNLVFSDGVAGAKVMIIGEAP 119

Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQ----IHISMISPWHPPGNRNLSNIEMEI 173
              +++ G+PF G+ G +LD+ML +I++ R      ++I+ + PW PP NR+ S+ E+ +
Sbjct: 120 GREEDMQGRPFVGRAGQLLDRMLAAIDMGREHQSDPVYITNVLPWRPPQNRDPSSEEIAM 179

Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
            RP + R I L  P++L+ +GN +             +  G W         +P L   H
Sbjct: 180 MRPFVERHIALAKPQVLVIMGNISAQTLLGKRG--ITRLRGHWVEAF----GVPALPMFH 233

Query: 234 PQELIQYPLIKKNTWHALITLKKALKN 260
           P  L++ P  K+  W  L++L+  L+N
Sbjct: 234 PAYLLRTPTAKREAWADLLSLQARLQN 260


>gi|254511671|ref|ZP_05123738.1| uracil-DNA glycosylase [Rhodobacteraceae bacterium KLH11]
 gi|221535382|gb|EEE38370.1| uracil-DNA glycosylase [Rhodobacteraceae bacterium KLH11]
          Length = 257

 Score =  223 bits (567), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 63/261 (24%), Positives = 114/261 (43%), Gaps = 9/261 (3%)

Query: 3   SKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKS-IDSAIQPITNIRHIH 60
            +  L       +  +  + G    + D P +      +  +     +    I +     
Sbjct: 1   MESALDPHTARALLEWQIELGATDAIGDAPIDRYALPDKAPKAPKAKTVATAIPSKTPEP 60

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120
                 A  +A+ A SL  L++ + +F  C L   +   + A  T G  +MIIG  P   
Sbjct: 61  VDAAAIAQQVAKSAGSLPALQAAMDAFEHCDLKRGARQLVFADGTPGARVMIIGEAPGRD 120

Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIM 179
           ++  GKPF G+ G +LD+ML +I++ R Q  +I+ + PW PP NR+    E+ + +P + 
Sbjct: 121 EDREGKPFVGRAGQLLDRMLAAIDLDRKQNVYITNVLPWRPPQNRDPKPEEIGMMKPFLE 180

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
           R + L  P++L+ +GN +             +  G+W         +P +   HP  L++
Sbjct: 181 RHVALAQPEVLVVMGNISCQAVLGKRG--ITRLRGRW----DQALNLPVIPMFHPAYLLR 234

Query: 240 YPLIKKNTWHALITLKKALKN 260
            P +K+  W  L+ LK  L+ 
Sbjct: 235 QPQMKRQAWADLLELKSRLEA 255


>gi|225677066|ref|ZP_03788071.1| uracil-DNA glycosylase-like protein [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225590888|gb|EEH12110.1| uracil-DNA glycosylase-like protein [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 273

 Score =  222 bits (565), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 70/268 (26%), Positives = 133/268 (49%), Gaps = 16/268 (5%)

Query: 7   LSQEQILTIALFYADSGVYWVFDEPNNEATYESQ---RKEKSIDSAIQPITNIR------ 57
           +S + +  +  FY + GV     E   E   ES+   +         +   ++R      
Sbjct: 1   MSNKDL-ELLKFYHEVGVDCTLMEGEEEKKLESKESVQPSVIQTGTKKKDADMRWDDTKD 59

Query: 58  ---HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIG 114
                 S  + +A  +A K  S+ EL+S+++SF  C +  T+ +T+ +       +M++G
Sbjct: 60  GKDMFPSDWIIEARKLASKCNSVDELRSVVKSFEGCEIKKTATNTVFSDGNPNAKVMLVG 119

Query: 115 YTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC 174
             P  ++++ G PF G +G +LDKML +I + RT+++IS    W PPGNR  +++E+++C
Sbjct: 120 EAPGANEDLQGIPFCGASGMLLDKMLNAINLDRTKVYISNTVFWRPPGNRKPTDLELDMC 179

Query: 175 RPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATV 232
           RP + + + L+SP+IL+ +G        ++  +      G++      +  + I T A  
Sbjct: 180 RPFVEKHVALVSPQILILVGGIACYSLLDST-ETISNLRGRFHTYTNQYLSNSITTAAIF 238

Query: 233 HPQELIQYPLIKKNTWHALITLKKALKN 260
           HP  L++ P  K+  W  L  +++ L N
Sbjct: 239 HPAYLLRQPAQKRLAWEDLKKIREYLDN 266


>gi|220925901|ref|YP_002501203.1| phage SPO1 DNA polymerase-like protein [Methylobacterium nodulans
           ORS 2060]
 gi|219950508|gb|ACL60900.1| phage SPO1 DNA polymerase-related protein [Methylobacterium
           nodulans ORS 2060]
          Length = 278

 Score =  222 bits (565), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 76/277 (27%), Positives = 121/277 (43%), Gaps = 19/277 (6%)

Query: 2   TSKRILSQEQILTIALFYADSGVYWVFDE-PNNEATYESQRKEKSIDSAIQPITN----- 55
            +     +  +L    F+  SGV  V DE P++       +      +A+ P+       
Sbjct: 1   MTDDAPDRSDLLAYLDFHVASGVDAVLDEVPHDRFAESEAKAAARPAAALPPVPPPAPAP 60

Query: 56  ------------IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICAT 103
                                  A  +A+ A SL EL++LL  F  C L  T+ + + A 
Sbjct: 61  RPPSRGSTFGRSAAAEPGEAADDARELARAAGSLAELEALLARFESCPLRFTAKNLVFAD 120

Query: 104 QTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGN 163
                 +M +G  P   ++  GKPF G++G +LD+M+ +I + R+  ++  I PW PPGN
Sbjct: 121 GEPSARVMFVGEAPGADEDRVGKPFMGRSGQLLDRMMAAIGLDRSNAYVGNIVPWRPPGN 180

Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH 223
           R+ +  E+  C+P I RQI L  P IL+ +G                ++ G+W    T  
Sbjct: 181 RSPTPQEVATCKPFIERQIALADPDILVCLGGVATQTLAG-TRDGILKSRGRWFPYQTGR 239

Query: 224 SIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
             I  LAT+HP  L++ PL K+  W     L+ AL  
Sbjct: 240 REIRLLATLHPAYLLRQPLQKRLAWRDFRALRAALDA 276


>gi|163745656|ref|ZP_02153016.1| uracil-DNA glycosylase, C-terminal [Oceanibulbus indolifex HEL-45]
 gi|161382474|gb|EDQ06883.1| uracil-DNA glycosylase, C-terminal [Oceanibulbus indolifex HEL-45]
          Length = 254

 Score =  222 bits (565), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 71/255 (27%), Positives = 119/255 (46%), Gaps = 8/255 (3%)

Query: 8   SQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQ 66
              Q   +  +  + G    + D P N     +   + S   A  P           V  
Sbjct: 5   DYHQAAEMLAWQVELGATEAICDAPVNRYEVPASPPKASAKIAKGPQPMQAAEKPDPVAL 64

Query: 67  ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126
           A   AQ A +L EL++ ++ F  C L   + + + +    G  LMI G +P   ++ +GK
Sbjct: 65  ARRAAQGAQTLDELRAAIQGFEACELHKGARNLVFSDGVPGAPLMIFGESPDRDEDRAGK 124

Query: 127 PFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELI 185
           PF G+TG MLD+ML +I++ R +  ++S I PW  P  R+    E+ + RP + R IEL 
Sbjct: 125 PFVGRTGQMLDRMLAAIDMGRDRNVYLSNILPWRTPQGRDPKPDEIAMMRPFVQRHIELA 184

Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK 245
            PK+L+  GN +       + +   +  G W    T  + +P +  VHP  L++ P  K+
Sbjct: 185 KPKVLILFGNWSCQSLL--EKRSIMRLRGNW----TKAADLPCMPMVHPAYLLRNPEAKR 238

Query: 246 NTWHALITLKKALKN 260
             W  L++++  L+N
Sbjct: 239 EAWADLLSVQAKLRN 253


>gi|163738869|ref|ZP_02146282.1| phage SPO1 DNA polymerase-related protein [Phaeobacter
           gallaeciensis BS107]
 gi|163741885|ref|ZP_02149275.1| uracil-DNA glycosylase [Phaeobacter gallaeciensis 2.10]
 gi|161385058|gb|EDQ09437.1| uracil-DNA glycosylase [Phaeobacter gallaeciensis 2.10]
 gi|161387674|gb|EDQ12030.1| phage SPO1 DNA polymerase-related protein [Phaeobacter
           gallaeciensis BS107]
          Length = 253

 Score =  221 bits (563), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 66/258 (25%), Positives = 110/258 (42%), Gaps = 10/258 (3%)

Query: 3   SKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHS 61
            +  L       +  +  + G    + D P N    +++  +    +A       R I  
Sbjct: 1   MESALDYHSAHALLAWQIELGATDAIGDAPVNRYELQARLPKPGAAAAEVAPAKPRDI-- 58

Query: 62  PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121
             V+ A  +A  A SL  L   L  F  C L   + + + A    G  +M++G  P   +
Sbjct: 59  DPVEVARQMAGAAGSLEGLYEALGQFEHCELKKGARNLVFADGQPGARVMVVGEAPGRDE 118

Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMR 180
           +I+GKPF G+ G +LD+ML +I + R    +I+ + PW PP NR+    E+ +  P + R
Sbjct: 119 DIAGKPFVGRAGQLLDRMLAAIGLSRKDSVYIANVLPWRPPQNRDPLPAEIAMMTPFLER 178

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
            I L  P IL+ +GN + +           +  G W          P +   HP  L++ 
Sbjct: 179 HIALAKPDILIAMGNISCDALLGKRG--ITRMRGTWQEAQGK----PVMPMFHPAYLLRQ 232

Query: 241 PLIKKNTWHALITLKKAL 258
           P  K+  W  L+ +K  L
Sbjct: 233 PAQKRAAWADLLEIKARL 250


>gi|83854882|ref|ZP_00948412.1| uracil-DNA glycosylase [Sulfitobacter sp. NAS-14.1]
 gi|83941405|ref|ZP_00953867.1| uracil-DNA glycosylase [Sulfitobacter sp. EE-36]
 gi|83842725|gb|EAP81892.1| uracil-DNA glycosylase [Sulfitobacter sp. NAS-14.1]
 gi|83847225|gb|EAP85100.1| uracil-DNA glycosylase [Sulfitobacter sp. EE-36]
          Length = 257

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 64/259 (24%), Positives = 116/259 (44%), Gaps = 11/259 (4%)

Query: 5   RILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPL 63
             +   Q L +  +  + G    + D P N     +  ++            +      +
Sbjct: 2   ESVDYHQALALLHWQIELGATEAICDAPVNRYEVPAAVEKPKAQKGKSGPVPLAAQGPDV 61

Query: 64  VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123
           V +A   A  A +L EL++ + +F  C L   +   + +  T G  +MI+G  P   ++ 
Sbjct: 62  VAEATQAAAGAATLDELRAAMAAFEHCELKRGARKMVFSDGTPGARVMIVGEAPGRDEDR 121

Query: 124 SGKPFSGKTGNMLDKMLQSIEIMRTQ----IHISMISPWHPPGNRNLSNIEMEICRPIIM 179
            G+PF G+ G +LDKML +I++ R      ++I+ + PW PP NR+    E+ + +P + 
Sbjct: 122 EGRPFVGRAGVLLDKMLAAIDMGRHHQTSPVYITNVLPWRPPQNRDPKPDEIAMMKPFLA 181

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
           R I L  P++L+ +GN +             +  G+W+        +P L   HP  L++
Sbjct: 182 RHIALAKPEVLVIVGNWSAQALLGKRG--ITRLRGQWTQAE----GLPALPMFHPAYLLR 235

Query: 240 YPLIKKNTWHALITLKKAL 258
            P  K+  W  L++LK  L
Sbjct: 236 SPEFKREAWADLLSLKAKL 254


>gi|254504642|ref|ZP_05116793.1| uracil-DNA glycosylase, family 4, putative [Labrenzia alexandrii
           DFL-11]
 gi|222440713|gb|EEE47392.1| uracil-DNA glycosylase, family 4, putative [Labrenzia alexandrii
           DFL-11]
          Length = 300

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 74/297 (24%), Positives = 126/297 (42%), Gaps = 48/297 (16%)

Query: 12  ILTIALFYADSGVYWVFDEPN--------------------------------------N 33
           +  +  FY  SGV     E                                         
Sbjct: 4   LEALLDFYLASGVDASLGEDVVDWFQLSEVQAKARQQSATPQAAAQPVAAPGQNVSQQVR 63

Query: 34  EATYESQRKEKSIDSAIQPITNI---------RHIHSPLVQQADSIAQKACSLHELKSLL 84
           + + ++Q   +   +   P                   ++  A  +A    SL +L++ L
Sbjct: 64  QVSPQNQSPSQPRPTQAAPAVGAGTRSPTDHGAIPDQAVISTARELASSTGSLADLRACL 123

Query: 85  RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIE 144
            +F  C+L  T+ S + A       +M+IG  P   +++ GKPF G++G +LD+ML +I 
Sbjct: 124 EAFDGCNLKRTAKSLVFADGNPDARVMLIGEAPGRDEDLQGKPFVGRSGQLLDRMLTAIG 183

Query: 145 IMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204
           + R++++I+   PW PPGNR  +  E EICRP I RQIEL++P +++F+G  +       
Sbjct: 184 LDRSRVYIANTVPWRPPGNRTPTPQETEICRPFIQRQIELVNPDVVVFLGAASAKTLLGV 243

Query: 205 DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
                 +  G+W         +  LAT HP  L++ PL K+ +W   +++K  L  L
Sbjct: 244 Q-DGIRKMRGRWMTYPVAGRQVAALATYHPAYLLRSPLEKRLSWRDFLSVKSKLSEL 299


>gi|218682587|ref|ZP_03530188.1| phage SPO1 DNA polymerase-related protein [Rhizobium etli CIAT 894]
          Length = 299

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 94/295 (31%), Positives = 148/295 (50%), Gaps = 35/295 (11%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEP--NNEATYESQRKEKSIDSAIQPI----- 53
           M S   LS  ++  +  F+AD+GV W+ +E   +  A +E+ +  +   +  QP      
Sbjct: 1   MISANDLSPAELAALLHFHADAGVEWLLEEEAVDRFAEFEAMKAARRPPTQAQPSVAGEG 60

Query: 54  ---------------------------TNIRHIHSPLVQQADSIAQKACSLHELKSLLRS 86
                                                VQQA  +A+ A SL ELK+ + +
Sbjct: 61  TGSGQGRTTPRPNAAARPAPAAIAASGPQPAIPDGEAVQQARFVAETARSLAELKTAIEA 120

Query: 87  FHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM 146
           F+ C+L  ++ STI A+      +M+IG  P   D+  G PFSGK+G + DKML +I + 
Sbjct: 121 FNGCNLKHSARSTIFASGDADSGIMVIGSAPGAEDDREGVPFSGKSGQLFDKMLAAIGLT 180

Query: 147 RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206
           R+ + ++ + PW PPGNR  S  EM+ICRP I RQI L  PK +L +GN +  FFF  + 
Sbjct: 181 RSSVLLTQVIPWRPPGNRPPSAAEMDICRPFIERQIALAEPKAILLLGNFSARFFFGEND 240

Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
                  G+W  +     +IP +A++HPQ+L+  P+ K+  W+ L+  +  LK+L
Sbjct: 241 TIHG-LRGRWKEIAVADCVIPAIASLHPQDLLTAPVNKRLAWNDLLAFQAKLKSL 294


>gi|68171577|ref|ZP_00544951.1| Phage SPO1 DNA polymerase-related protein [Ehrlichia chaffeensis
           str. Sapulpa]
 gi|88657868|ref|YP_506904.1| uracil-DNA glycosylase [Ehrlichia chaffeensis str. Arkansas]
 gi|67999003|gb|EAM85680.1| Phage SPO1 DNA polymerase-related protein [Ehrlichia chaffeensis
           str. Sapulpa]
 gi|88599325|gb|ABD44794.1| uracil-DNA glycosylase, family 4 [Ehrlichia chaffeensis str.
           Arkansas]
          Length = 261

 Score =  220 bits (559), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 68/262 (25%), Positives = 128/262 (48%), Gaps = 8/262 (3%)

Query: 7   LSQEQILTIALFYADSGVYWVFDEPN-NEATYESQRKEKSIDSAIQPITNIRHIHSPLVQ 65
           +S   +L +  FY ++G+    ++   N  T ++   + S D+          I      
Sbjct: 1   MSDLDLLEVLKFYHENGIDCTLEDVQYNVFTSKNLSLQNSSDTGYCMKEKQASIKENTED 60

Query: 66  ----QADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121
               +A S+A++  ++ +LKS + SF  C + + + +T+ A       +M+IG  P  ++
Sbjct: 61  YYLLKAQSLAEQCNTIEQLKSAVESFDGCDIKNLATNTVFADGNPKARVMLIGEAPGANE 120

Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ 181
           ++ G PF G +G +LDKMLQ+I   RT ++IS    W PPGNR  ++ E+ +C+P + + 
Sbjct: 121 DLKGIPFCGASGMLLDKMLQAIGFDRTTVYISNAVFWRPPGNRRPTDFEIAVCKPFVEKH 180

Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATVHPQELIQ 239
           I LI P++L+ +G+       ++      +  G++ +         I T    HP  L++
Sbjct: 181 IALIVPQMLVLVGSTACYAMLDSK-NPISRLRGRFHSYSNQFLQHSITTGIIFHPSYLLR 239

Query: 240 YPLIKKNTWHALITLKKALKNL 261
            P+ K+  W  L  +K+    L
Sbjct: 240 QPMQKRLAWEDLKQIKRYFDTL 261


>gi|259415078|ref|ZP_05739000.1| uracil-DNA glycosylase [Silicibacter sp. TrichCH4B]
 gi|259348988|gb|EEW60742.1| uracil-DNA glycosylase [Silicibacter sp. TrichCH4B]
          Length = 255

 Score =  220 bits (559), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 63/260 (24%), Positives = 115/260 (44%), Gaps = 9/260 (3%)

Query: 3   SKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHS 61
            +  L       +  +  + G    + D P N    + Q+ +     A  P   ++    
Sbjct: 1   MESELDYWSAKALLEWQVELGATEAMMDAPINRYELQDQKPKA-ARGAEAPPAPVKPKSV 59

Query: 62  PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121
             V +A  +A+ A +L  L++ L +F  C L   + + + +    G  +MIIG  P   +
Sbjct: 60  DPVAEAVKLAKSADALPGLRAALETFEHCDLKRGARNLVFSDGQAGARVMIIGEAPGRDE 119

Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMR 180
           ++ GKPF G+ G +LDKML +I++ R +  +I+ + PW PP NR+    E+ +  P + R
Sbjct: 120 DLQGKPFVGRAGQLLDKMLAAIDLSRDENVYITNVLPWRPPQNRDPLPAEIAMLVPFLER 179

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
            + L  P +L+ +GN +             +  G W+         P +   HP  L++ 
Sbjct: 180 HVALAQPDVLVLMGNISCQAVLGKRG--ITRLRGNWAQAWGK----PVIPMFHPAYLLRQ 233

Query: 241 PLIKKNTWHALITLKKALKN 260
              K+  W  L+ L+  L +
Sbjct: 234 ASAKRQAWADLLELRARLNS 253


>gi|91203817|emb|CAJ71470.1| conserved hypothetical protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 263

 Score =  220 bits (559), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 66/253 (26%), Positives = 113/253 (44%), Gaps = 8/253 (3%)

Query: 10  EQILTIALFYADSGVYWV-FDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQAD 68
           + +     F    GV  +  +  NN     +   +K+            +   PL  +  
Sbjct: 15  KDLKARLAFEETFGVEVISINAQNNLVKSSTTITQKNDMPKTSAPQTESNDKKPLTTRPK 74

Query: 69  SIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128
               KA  L ELK+     H C L  T  + +         LM +G  P   +++ G+PF
Sbjct: 75  E--GKAKLLEELKNETLVCHKCPLGETRTNLVFGAGNPMASLMFVGEAPGRDEDLQGEPF 132

Query: 129 SGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188
            G+ G +L K++++I++ R+ ++I+ I    PPGNRN    E+ +C P++ +QI++I PK
Sbjct: 133 VGRAGQLLTKIIEAIDMKRSDVYIANILKCRPPGNRNPLTDEIALCIPVLTKQIDIIKPK 192

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW 248
           +L  +G        N   +      GK+ +       IPT+AT HP  L++ P  K   W
Sbjct: 193 VLCAMGTFAAQTLLNTK-EPIGFLRGKFHDY----KGIPTMATFHPAYLLRNPGEKAKVW 247

Query: 249 HALITLKKALKNL 261
             +  ++  LK L
Sbjct: 248 EDMKKIRDLLKEL 260


>gi|99078039|ref|YP_611297.1| phage SPO1 DNA polymerase-related protein [Ruegeria sp. TM1040]
 gi|99035177|gb|ABF62035.1| phage SPO1 DNA polymerase-related protein [Ruegeria sp. TM1040]
          Length = 255

 Score =  219 bits (557), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 69/261 (26%), Positives = 117/261 (44%), Gaps = 9/261 (3%)

Query: 3   SKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHS 61
            +  L       +  +  + G    + D P +    E Q+  K   +A  P T ++    
Sbjct: 1   MESELDYWSAKALLEWQVELGATEAMMDTPIDRYGLEDQKP-KPARAADTPPTPVKPKTV 59

Query: 62  PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121
             V +A  +A+ A +L  L++ L  F  C L   + + + +    G  +MIIG  P   +
Sbjct: 60  DPVAEAAKLAKTAQALPSLRAALEQFEHCDLKRGARNLVFSDGQAGARVMIIGEAPGRDE 119

Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMR 180
           ++ GKPF G+ G +LDKML +IE+ R +  +I+ + PW PP NR+    E+ +  P + R
Sbjct: 120 DLQGKPFVGRAGQLLDKMLDAIELSREKNVYITNVLPWRPPQNRDPLPAEISMLVPFLER 179

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
            + L  P IL+ +GN +             +  G WS         P +   HP  L++ 
Sbjct: 180 HVALAEPDILVLMGNISCQAVLGKRG--ITRLRGTWSEAWGK----PVIPMFHPAYLLRQ 233

Query: 241 PLIKKNTWHALITLKKALKNL 261
              K+  W  L+ L+  L +L
Sbjct: 234 AHAKRQAWADLLELRARLNSL 254


>gi|83945346|ref|ZP_00957694.1| hypothetical protein OA2633_14206 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83851180|gb|EAP89037.1| hypothetical protein OA2633_14206 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 261

 Score =  219 bits (557), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 72/263 (27%), Positives = 120/263 (45%), Gaps = 4/263 (1%)

Query: 1   MT-SKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHI 59
           MT          + ++  ++  SGV  +   P  ++   +         A          
Sbjct: 1   MTAPLNPEDIRALKSLISWWEQSGVEALPPLPAPKSARPAPPPSMEAR-ATGAQARQAGF 59

Query: 60  HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSD 119
            +   Q   ++AQ A ++ ELK  L +F  C L +T+  T+ A      D+M++G  P  
Sbjct: 60  GAAPTQNGRAMAQAAQTVGELKQALDAFDGCPLKATATQTVYARGNPQADVMVVGEAPGR 119

Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIM 179
            ++  G PF G+ G +LD+ML +I +  T  +I+ +  W PPGNR  ++ E+E C P   
Sbjct: 120 DEDREGAPFIGQAGQLLDRMLAAIGLNETSAYITNVVFWRPPGNRKPTDAEIEACLPFAE 179

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI-IPTLATVHPQELI 238
           R IEL+ PK+++F G  +     ++ A       G+W +        IP L   HP  L+
Sbjct: 180 RHIELVRPKVIVFAGGISAQSLLHSKAGIMA-LRGRWHDYTLSDGTMIPALPMYHPAFLL 238

Query: 239 QYPLIKKNTWHALITLKKALKNL 261
           + P  K  +W  L++LK  L  L
Sbjct: 239 RRPQEKAKSWQDLLSLKAKLAAL 261


>gi|328544965|ref|YP_004305074.1| Uracil-DNA glycosylase, family 4 [polymorphum gilvum SL003B-26A1]
 gi|326414707|gb|ADZ71770.1| Uracil-DNA glycosylase, family 4, putative [Polymorphum gilvum
           SL003B-26A1]
          Length = 300

 Score =  218 bits (556), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 77/288 (26%), Positives = 130/288 (45%), Gaps = 38/288 (13%)

Query: 8   SQEQILTIALFYADSGVYWVFDE-PNNEATYESQRKEKSIDSAIQP-------------- 52
           S   +  +  F   +GV  + +E P +     ++ +      A +P              
Sbjct: 11  SLRDLEALLDFLQAAGVDGLLEEAPVDRFALPAEAEASRSAPAQRPEMRPDLRPAAPATP 70

Query: 53  ------ITNIRHIHSPL----------------VQQADSIAQKACSLHELKSLLRSFHDC 90
                  T    + +PL                V  A   A+ A +L  L++ L +F  C
Sbjct: 71  GPGVTAPTRAAPVPAPLPGGGGYDGAVIPGEETVVSAREAARSAETLEALRACLAAFKGC 130

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150
           +L  T+ + +         +M++G  P   +++ G PF G++G +LD+ML++I + R+Q+
Sbjct: 131 NLHLTAKNLVFDDGNPQARVMLVGEAPGRDEDLQGLPFVGRSGQLLDRMLKAIGLDRSQV 190

Query: 151 HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210
           +I+ + PW PPGNR  +  E EIC+P I RQIEL  P IL+F+G  +             
Sbjct: 191 YIANVVPWRPPGNRTPTPQETEICKPFIARQIELADPDILVFLGAASAKVLLGVQ-DGIR 249

Query: 211 QNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
           +  G+W    T    I  +AT HP  L++ PL K+  W   + L++AL
Sbjct: 250 KMRGRWMTYDTGRRQIRCIATFHPAYLLRSPLEKRLAWRDFLALRQAL 297


>gi|306842110|ref|ZP_07474780.1| uracil-DNA glycosylase, family 4 [Brucella sp. BO2]
 gi|306287783|gb|EFM59211.1| uracil-DNA glycosylase, family 4 [Brucella sp. BO2]
          Length = 290

 Score =  218 bits (556), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 31/281 (11%)

Query: 11  QILTIALFYADSGVYW-VFDEPNNEATY---ESQRKEKSIDSAIQPITNIRH-------- 58
            I  +  FYA++GV   + + P +        +  + +   +A QP +N           
Sbjct: 9   DIEGLLRFYAEAGVDVPLCETPIDRFAAATHPAPAQSRMQAAAQQPESNPAQAREERART 68

Query: 59  -----------------IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTIC 101
                              +  +  A   A +A +L EL+  L +F  C+L  T+ +   
Sbjct: 69  VAVPSPSSKPVQAAMDLPDNAQIALAREAASQAETLEELREKLAAFDGCNLKFTAKNLCF 128

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
           A      D+M IG  P   +++ G PF GK+G +L++M+++I + R +++I+   PW PP
Sbjct: 129 ADGDPSSDIMFIGEAPGRDEDMEGLPFVGKSGQLLNRMIEAIGLKREEVYIANTIPWRPP 188

Query: 162 GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221
           GNR  + +E E+CRP I RQIEL +PK+L+ +G           A+   +  G W    T
Sbjct: 189 GNRAPTPLETELCRPFIERQIELAAPKVLVALGGPAGKALTGA-AEGILRLRGNWKIHRT 247

Query: 222 P-HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
           P    IP + T+HP  L++ P  K+  W   + +K  L  L
Sbjct: 248 PTGMEIPVMPTLHPAYLLRTPAQKRFAWRDFLAVKLKLAEL 288


>gi|306845226|ref|ZP_07477802.1| uracil-DNA glycosylase, family 4 [Brucella sp. BO1]
 gi|306274385|gb|EFM56192.1| uracil-DNA glycosylase, family 4 [Brucella sp. BO1]
          Length = 290

 Score =  218 bits (555), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 31/281 (11%)

Query: 11  QILTIALFYADSGVYW-VFDEPNNEATY---ESQRKEKSIDSAIQPITNIRH-------- 58
            I  +  FYA++GV   + + P +        +  + +   +A QP +N           
Sbjct: 9   DIEGLLRFYAEAGVDVPLCETPIDRFAAATHPAPAQSRMQAAAQQPESNPVQAREERART 68

Query: 59  -----------------IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTIC 101
                              +  +  A   A +A +L EL+  L +F  C+L  T+ +   
Sbjct: 69  VAAPSPSSKPVQAAMDLPDNAQIALAREAASQAETLEELREKLAAFDGCNLKFTAKNLCF 128

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
           A      D+M IG  P   +++ G PF GK+G +L++M+++I + R +++I+   PW PP
Sbjct: 129 ADGDPSSDIMFIGEAPGRDEDMEGLPFVGKSGQLLNRMIEAIGLKREEVYIANTIPWRPP 188

Query: 162 GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221
           GNR  + +E E+CRP I RQIEL +PK+L+ +G           A+   +  G W    T
Sbjct: 189 GNRAPTPLETELCRPFIERQIELAAPKVLVALGGPAGKALTG-TAEGILRLRGNWKIHRT 247

Query: 222 P-HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
           P    IP + T+HP  L++ P  K+  W   + +K  L  L
Sbjct: 248 PTGMEIPVMPTLHPAYLLRTPAQKRFAWRDFLAVKLKLAEL 288


>gi|254718769|ref|ZP_05180580.1| uracil-DNA glycosylase, family 4 [Brucella sp. 83/13]
 gi|265983747|ref|ZP_06096482.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|306840191|ref|ZP_07472971.1| uracil-DNA glycosylase, family 4 [Brucella sp. NF 2653]
 gi|264662339|gb|EEZ32600.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|306404722|gb|EFM61021.1| uracil-DNA glycosylase, family 4 [Brucella sp. NF 2653]
          Length = 290

 Score =  218 bits (555), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 31/281 (11%)

Query: 11  QILTIALFYADSGVYW-VFDEPNNEATY---ESQRKEKSIDSAIQPITNIRH-------- 58
            I  +  FYA++GV   + + P +        +  + +   +A QP +N           
Sbjct: 9   DIEGLLRFYAEAGVDVPLCETPIDRFAAATHPAPAQSRMQAAAQQPESNPAQAREERART 68

Query: 59  -----------------IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTIC 101
                              +  +  A   A +A +L EL+  L +F  C+L  T+ +   
Sbjct: 69  VAVPSPSSKPVQAAMDLPDNAQIALAREAASQAETLEELREKLAAFDGCNLKFTAKNLCF 128

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
           A      D+M IG  P   +++ G PF GK+G +L++M+++I + R +++I+   PW PP
Sbjct: 129 ADGDPSSDIMFIGEAPGRDEDMEGLPFVGKSGQLLNRMIEAIGLKREEVYIANTIPWRPP 188

Query: 162 GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221
           GNR  + +E E+CRP I RQIEL +PK+L+ +G           A+   +  G W    T
Sbjct: 189 GNRAPTPLETELCRPFIERQIELAAPKVLVALGGPAGKALTGA-AEGILRLRGNWKIHRT 247

Query: 222 P-HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
           P    IP + T+HP  L++ P  K+  W   + +K  L  L
Sbjct: 248 PTGMEIPVMPTLHPAYLLRTPAQKRFAWRDFLAVKLKLAEL 288


>gi|239831462|ref|ZP_04679791.1| uracil-DNA glycosylase, family 4 [Ochrobactrum intermedium LMG
           3301]
 gi|239823729|gb|EEQ95297.1| uracil-DNA glycosylase, family 4 [Ochrobactrum intermedium LMG
           3301]
          Length = 284

 Score =  218 bits (554), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 79/275 (28%), Positives = 121/275 (44%), Gaps = 25/275 (9%)

Query: 11  QILTIALFYADSGVYWVFDE-PNNEATYESQRKEKSIDSAIQPITNIRHI---------- 59
            I  +  FYA++GV     E P +      +          Q                  
Sbjct: 9   DIEGLLRFYAEAGVDMPLSETPIDRFAEPQRPAPAQPAMQTQSPPERPRQQPRPAPAPAP 68

Query: 60  HSPLVQQADSIAQKAC------------SLHELKSLLRSFHDCHLCSTSLSTICATQTEG 107
            S  VQ A  +   A             +L EL+  L +F  C+L  T+ +   A     
Sbjct: 69  TSRPVQAAADLPDTAQIALAREAAAQASTLDELREKLAAFDGCNLKFTAKNLCFADGDPS 128

Query: 108 QDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLS 167
            D+M IG  P   +++ G PF GK+G +L++M++SI + R  ++I+   PW PPGNR  +
Sbjct: 129 SDIMFIGEAPGRDEDMEGLPFVGKSGQLLNRMIESIGLKRESVYIANTIPWRPPGNRTPT 188

Query: 168 NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI-I 226
            +E E+CRP I RQIEL +PK+L+ +G            +   +  G W    TP  I I
Sbjct: 189 PLETELCRPFIERQIELAAPKVLVALGGPAGKALTGAT-EGILRLRGNWKIHRTPSGIEI 247

Query: 227 PTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
           P + T+HP  L++ P  K+  W   + +K  L  L
Sbjct: 248 PVMPTLHPAYLLRTPAQKRFAWRDFLAVKLKLAEL 282


>gi|256060754|ref|ZP_05450917.1| uracil-DNA glycosylase, family 4 [Brucella neotomae 5K33]
 gi|261324742|ref|ZP_05963939.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261300722|gb|EEY04219.1| conserved hypothetical protein [Brucella neotomae 5K33]
          Length = 290

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 77/281 (27%), Positives = 130/281 (46%), Gaps = 31/281 (11%)

Query: 11  QILTIALFYADSGVYW-VFDEPNNEATY---ESQRKEKSIDSAIQPITNIRH-------- 58
            +  +  FYA++GV   + + P +        +  + +   +A QP +N           
Sbjct: 9   DMEGLLRFYAEAGVDVPLCETPIDRFAAATHPAPAQSRMQAAAQQPESNPAQAREERART 68

Query: 59  -----------------IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTIC 101
                              +  +  A   A +A +L EL+  L +F  C+L  T+ +   
Sbjct: 69  VAVPSPSSKPVQAAMVLPDNAQIALAREAASQAETLEELREKLAAFDGCNLKFTAKNLCF 128

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
           A      D+M IG  P   +++ G PF GK+G +L++M+++I + R +++I+   PW PP
Sbjct: 129 ADGDPSSDIMFIGEAPGRDEDMEGLPFVGKSGQLLNRMIEAIGLKREEVYIANTIPWRPP 188

Query: 162 GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221
           GNR  + +E E+CRP I RQIEL +PK+L+ +G           A+   +  G W    T
Sbjct: 189 GNRAPTPLETELCRPFIERQIELAAPKVLVALGGPAGKALTGA-AEGILRLRGNWKIHRT 247

Query: 222 P-HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
           P    IP + T+HP  L++ P  K+  W   + +K  L  L
Sbjct: 248 PTGMEIPVMPTLHPAYLLRTPAQKRFAWRDFLAVKLKLAEL 288


>gi|89056392|ref|YP_511843.1| phage SPO1 DNA polymerase-related protein [Jannaschia sp. CCS1]
 gi|88865941|gb|ABD56818.1| phage SPO1 DNA polymerase-related protein [Jannaschia sp. CCS1]
          Length = 300

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 63/267 (23%), Positives = 107/267 (40%), Gaps = 24/267 (8%)

Query: 11  QILTIALFYADSGVY-WVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHS-------- 61
             L    +  + G    + D P +     +         A  P+   R            
Sbjct: 40  DALAALEWQVELGADEAMLDAPLDRFDLPAPVAMPKAPPAAGPVGPSRAAAPVNSTRPAT 99

Query: 62  ----PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117
                 V  A  +A+ A SL  L S +  F  C L   + + +    T    +MI+G  P
Sbjct: 100 LPQVDAVAIARQLAEAAGSLEALSSAMEGFEHCELRRGARNFVFHDGTPDARVMIVGEAP 159

Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-----HISMISPWHPPGNRNLSNIEME 172
              ++  GKPF G+ G +LD+M  +I + R        +I+ + PW PP NR+    E+ 
Sbjct: 160 GREEDSQGKPFVGRAGQLLDRMFAAIGLDRAVEGGEGLYITNMLPWRPPQNRDPKAEELA 219

Query: 173 ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATV 232
           +  P + R I+L+ P++L+ +GN               +  G W ++       PT+   
Sbjct: 220 MMAPFVQRHIDLVDPEVLVLMGNHACAGLLGRRG--ITRMRGTWEDVN----GRPTMPMC 273

Query: 233 HPQELIQYPLIKKNTWHALITLKKALK 259
           HP  L++ P  K+  W  L+++K  L 
Sbjct: 274 HPAYLLRNPAAKREAWADLLSIKARLA 300


>gi|158425118|ref|YP_001526410.1| phage SPO1 DNA polymerase-related protein [Azorhizobium caulinodans
           ORS 571]
 gi|158332007|dbj|BAF89492.1| phage SPO1 DNA polymerase-related protein [Azorhizobium caulinodans
           ORS 571]
          Length = 297

 Score =  217 bits (552), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 78/296 (26%), Positives = 126/296 (42%), Gaps = 41/296 (13%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPITNIRHI 59
           MTS    + E       FYA++GV     DEP +     +  K +       P T     
Sbjct: 1   MTS---FAYEHFRDALAFYAEAGVDVAIGDEPVDRFAESAAEKARRGVGRSAPQTASAQP 57

Query: 60  HSP------------------------------------LVQQADSIAQKACSLHELKSL 83
            +                                      V  A   A  A SL EL+++
Sbjct: 58  VNDSPAASPAPVRAPAAPRAPAPAAAGPGPMAAAQAPDQAVMAAREAAHTAASLDELRAM 117

Query: 84  LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143
           L +F  C L  T+   + A       +M +G  P   +++ G PF G++G +LD ML +I
Sbjct: 118 LEAFEGCPLKRTATRLVFADGNPAAKVMFVGEAPGRDEDVQGLPFVGRSGRLLDLMLGAI 177

Query: 144 EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
            + RT+ +I+ + PW PPGNR  +  E  IC P I RQ+EL +P +L+ +G  +     +
Sbjct: 178 GLDRTKAYIANVIPWRPPGNRTPTPQETAICLPFIRRQVELANPDVLVCLGGPSAQALLS 237

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
              +   +  G++ +  T    I  +AT HP  L++ PL K+  W  ++ ++ AL 
Sbjct: 238 -TTEGITKLRGRFMSYDTGSRTIKAIATFHPAYLLRTPLGKRLAWRDMLAVEAALN 292


>gi|17987604|ref|NP_540238.1| DNA polymerase [Brucella melitensis bv. 1 str. 16M]
 gi|23501507|ref|NP_697634.1| phage SPO1 DNA polymerase-like protein [Brucella suis 1330]
 gi|62289582|ref|YP_221375.1| phage SPO1 DNA polymerase-like protein [Brucella abortus bv. 1 str.
           9-941]
 gi|82699512|ref|YP_414086.1| uracil-DNA glycosylase [Brucella melitensis biovar Abortus 2308]
 gi|148560496|ref|YP_001258613.1| phage SPO1 DNA polymerase-like protein [Brucella ovis ATCC 25840]
 gi|161618595|ref|YP_001592482.1| uracil-DNA glycosylase [Brucella canis ATCC 23365]
 gi|163842895|ref|YP_001627299.1| uracil-DNA glycosylase [Brucella suis ATCC 23445]
 gi|189023841|ref|YP_001934609.1| DNA polymerase, bacteriophage-type [Brucella abortus S19]
 gi|225627127|ref|ZP_03785165.1| uracil-DNA glycosylase, family 4 [Brucella ceti str. Cudo]
 gi|225852145|ref|YP_002732378.1| uracil-DNA glycosylase [Brucella melitensis ATCC 23457]
 gi|237815079|ref|ZP_04594077.1| uracil-DNA glycosylase, family 4 [Brucella abortus str. 2308 A]
 gi|254688903|ref|ZP_05152157.1| uracil-DNA glycosylase, family 4 [Brucella abortus bv. 6 str. 870]
 gi|254693384|ref|ZP_05155212.1| uracil-DNA glycosylase, family 4 [Brucella abortus bv. 3 str.
           Tulya]
 gi|254697035|ref|ZP_05158863.1| uracil-DNA glycosylase, family 4 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254701414|ref|ZP_05163242.1| uracil-DNA glycosylase, family 4 [Brucella suis bv. 5 str. 513]
 gi|254703959|ref|ZP_05165787.1| uracil-DNA glycosylase, family 4 [Brucella suis bv. 3 str. 686]
 gi|254707663|ref|ZP_05169491.1| uracil-DNA glycosylase, family 4 [Brucella pinnipedialis
           M163/99/10]
 gi|254709754|ref|ZP_05171565.1| uracil-DNA glycosylase, family 4 [Brucella pinnipedialis B2/94]
 gi|254713757|ref|ZP_05175568.1| uracil-DNA glycosylase, family 4 [Brucella ceti M644/93/1]
 gi|254717185|ref|ZP_05178996.1| uracil-DNA glycosylase, family 4 [Brucella ceti M13/05/1]
 gi|254729934|ref|ZP_05188512.1| uracil-DNA glycosylase, family 4 [Brucella abortus bv. 4 str. 292]
 gi|256031244|ref|ZP_05444858.1| uracil-DNA glycosylase, family 4 [Brucella pinnipedialis M292/94/1]
 gi|256044322|ref|ZP_05447226.1| uracil-DNA glycosylase, family 4 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256159355|ref|ZP_05457138.1| uracil-DNA glycosylase, family 4 [Brucella ceti M490/95/1]
 gi|256254652|ref|ZP_05460188.1| uracil-DNA glycosylase, family 4 [Brucella ceti B1/94]
 gi|256257151|ref|ZP_05462687.1| uracil-DNA glycosylase, family 4 [Brucella abortus bv. 9 str. C68]
 gi|256264343|ref|ZP_05466875.1| DNA polymerase [Brucella melitensis bv. 2 str. 63/9]
 gi|256369059|ref|YP_003106567.1| phage SPO1 DNA polymerase-related protein [Brucella microti CCM
           4915]
 gi|260168380|ref|ZP_05755191.1| phage SPO1 DNA polymerase-related protein [Brucella sp. F5/99]
 gi|260545657|ref|ZP_05821398.1| DNA polymerase [Brucella abortus NCTC 8038]
 gi|260563676|ref|ZP_05834162.1| DNA polymerase [Brucella melitensis bv. 1 str. 16M]
 gi|260566792|ref|ZP_05837262.1| DNA polymerase [Brucella suis bv. 4 str. 40]
 gi|260754388|ref|ZP_05866736.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260757607|ref|ZP_05869955.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260761433|ref|ZP_05873776.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260883413|ref|ZP_05895027.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|261213634|ref|ZP_05927915.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
 gi|261219001|ref|ZP_05933282.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261221827|ref|ZP_05936108.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|261315159|ref|ZP_05954356.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261317285|ref|ZP_05956482.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261321499|ref|ZP_05960696.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|261751953|ref|ZP_05995662.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|261754611|ref|ZP_05998320.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|261757840|ref|ZP_06001549.1| DNA polymerase [Brucella sp. F5/99]
 gi|265988323|ref|ZP_06100880.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|265990734|ref|ZP_06103291.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265997792|ref|ZP_06110349.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|294851989|ref|ZP_06792662.1| uracil-DNA glycosylase [Brucella sp. NVSL 07-0026]
 gi|297247997|ref|ZP_06931715.1| DNA polymerase bacteriophage-type [Brucella abortus bv. 5 str.
           B3196]
 gi|17983312|gb|AAL52502.1| DNA polymerase, bacteriophage-type [Brucella melitensis bv. 1 str.
           16M]
 gi|23347415|gb|AAN29549.1| phage SPO1 DNA polymerase-related protein [Brucella suis 1330]
 gi|62195714|gb|AAX74014.1| phage SPO1 DNA polymerase-related protein [Brucella abortus bv. 1
           str. 9-941]
 gi|82615613|emb|CAJ10600.1| ATP/GTP-binding site motif A (P-loop):Uracil-DNA glycosylase
           superfamily:Phage SPO1 DNA polymerase-related protein
           [Brucella melitensis biovar Abortus 2308]
 gi|148371753|gb|ABQ61732.1| phage SPO1 DNA polymerase-related protein [Brucella ovis ATCC
           25840]
 gi|161335406|gb|ABX61711.1| uracil-DNA glycosylase, family 4 [Brucella canis ATCC 23365]
 gi|163673618|gb|ABY37729.1| uracil-DNA glycosylase, family 4 [Brucella suis ATCC 23445]
 gi|189019413|gb|ACD72135.1| DNA polymerase, bacteriophage-type [Brucella abortus S19]
 gi|225617962|gb|EEH15006.1| uracil-DNA glycosylase, family 4 [Brucella ceti str. Cudo]
 gi|225640510|gb|ACO00424.1| uracil-DNA glycosylase, family 4 [Brucella melitensis ATCC 23457]
 gi|237789916|gb|EEP64126.1| uracil-DNA glycosylase, family 4 [Brucella abortus str. 2308 A]
 gi|255999219|gb|ACU47618.1| phage SPO1 DNA polymerase-related protein [Brucella microti CCM
           4915]
 gi|260097064|gb|EEW80939.1| DNA polymerase [Brucella abortus NCTC 8038]
 gi|260153692|gb|EEW88784.1| DNA polymerase [Brucella melitensis bv. 1 str. 16M]
 gi|260156310|gb|EEW91390.1| DNA polymerase [Brucella suis bv. 4 str. 40]
 gi|260667925|gb|EEX54865.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260671865|gb|EEX58686.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260674496|gb|EEX61317.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260872941|gb|EEX80010.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|260915241|gb|EEX82102.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
 gi|260920411|gb|EEX87064.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|260924090|gb|EEX90658.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261294189|gb|EEX97685.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|261296508|gb|EEY00005.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261304185|gb|EEY07682.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261737824|gb|EEY25820.1| DNA polymerase [Brucella sp. F5/99]
 gi|261741706|gb|EEY29632.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|261744364|gb|EEY32290.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|262552260|gb|EEZ08250.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|263001518|gb|EEZ14093.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263094617|gb|EEZ18415.1| DNA polymerase [Brucella melitensis bv. 2 str. 63/9]
 gi|264660520|gb|EEZ30781.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|294820578|gb|EFG37577.1| uracil-DNA glycosylase [Brucella sp. NVSL 07-0026]
 gi|297175166|gb|EFH34513.1| DNA polymerase bacteriophage-type [Brucella abortus bv. 5 str.
           B3196]
 gi|326408646|gb|ADZ65711.1| DNA polymerase, bacteriophage-type [Brucella melitensis M28]
 gi|326538367|gb|ADZ86582.1| uracil-DNA glycosylase, family 4 [Brucella melitensis M5-90]
          Length = 290

 Score =  217 bits (552), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 77/281 (27%), Positives = 130/281 (46%), Gaps = 31/281 (11%)

Query: 11  QILTIALFYADSGVYW-VFDEPNNEATY---ESQRKEKSIDSAIQPITNIRH-------- 58
            +  +  FYA++GV   + + P +        +  + +   +A QP +N           
Sbjct: 9   DMEGLLRFYAEAGVDVPLCETPIDRFAAATHPAPAQSRMQAAAQQPESNPAQAREERART 68

Query: 59  -----------------IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTIC 101
                              +  +  A   A +A +L EL+  L +F  C+L  T+ +   
Sbjct: 69  VAVPSPSSKPVQAAMDLPDNAQIALAREAASQAETLEELREKLAAFDGCNLKFTAKNLCF 128

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
           A      D+M IG  P   +++ G PF GK+G +L++M+++I + R +++I+   PW PP
Sbjct: 129 ADGDPSSDIMFIGEAPGRDEDMEGLPFVGKSGQLLNRMIEAIGLKREEVYIANTIPWRPP 188

Query: 162 GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221
           GNR  + +E E+CRP I RQIEL +PK+L+ +G           A+   +  G W    T
Sbjct: 189 GNRAPTPLETELCRPFIERQIELAAPKVLVALGGPAGKALTGA-AEGILRLRGNWKIHRT 247

Query: 222 P-HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
           P    IP + T+HP  L++ P  K+  W   + +K  L  L
Sbjct: 248 PTGMEIPVMPTLHPAYLLRTPAQKRFAWRDFLAVKLKLAEL 288


>gi|256113158|ref|ZP_05454035.1| uracil-DNA glycosylase, family 4 [Brucella melitensis bv. 3 str.
           Ether]
 gi|265994572|ref|ZP_06107129.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|262765685|gb|EEZ11474.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
          Length = 290

 Score =  217 bits (552), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 76/281 (27%), Positives = 129/281 (45%), Gaps = 31/281 (11%)

Query: 11  QILTIALFYADSGVYW-VFDEPNNEATY---ESQRKEKSIDSAIQPITNIRH-------- 58
            +  +  FYA++GV   + + P +        +  + +   +A QP +N           
Sbjct: 9   DMEGLLRFYAEAGVDVPLCETPIDRFAAATHPAPAQSRMQAAAQQPESNPAQAREERART 68

Query: 59  -----------------IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTIC 101
                              +  +  A   A +A +L EL+  L +F  C+L  T+ +   
Sbjct: 69  VAVPSPSSKPVQAAMDLPDNAQIALAREAASQAETLEELREKLAAFDGCNLKFTAKNLCF 128

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
           A      D+M IG  P   +++ G PF GK+G +L++M+++I + R +++I+   PW PP
Sbjct: 129 ADGDPSSDIMFIGEAPGRDEDMEGLPFVGKSGQLLNRMIEAIGLKREEVYIANTIPWRPP 188

Query: 162 GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221
           GNR  + +E E+ RP I RQIEL +PK+L+ +G           A+   +  G W    T
Sbjct: 189 GNRAPTPLETELYRPFIERQIELAAPKVLVALGGPAGKALTGA-AEGILRLRGNWKIHRT 247

Query: 222 P-HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
           P    IP + T+HP  L++ P  K+  W   + +K  L  L
Sbjct: 248 PTGMEIPVMPTLHPAYLLRTPAQKRFAWRDFLAVKLKLAEL 288


>gi|73666677|ref|YP_302693.1| DNA polymerase-related protein [Ehrlichia canis str. Jake]
 gi|72393818|gb|AAZ68095.1| DNA polymerase-related protein [Ehrlichia canis str. Jake]
          Length = 261

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 66/262 (25%), Positives = 128/262 (48%), Gaps = 8/262 (3%)

Query: 7   LSQEQILTIALFYADSGVYWVFDEPN-----NEATYESQRKEKSIDSAIQPITNIRHIHS 61
           +    +L +  FY ++GV    ++       N+            +   + I+   +  +
Sbjct: 1   MDDLDLLEVLKFYHENGVDCTLEDIQYHVLKNKNLSLQDTDSIKSNLEGKKISMKENTET 60

Query: 62  PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121
             + +A S+A+K  ++ +LKS + SF  C + + + +T+ A      ++M+IG  P  ++
Sbjct: 61  YYLLKAQSLAEKCNNIEQLKSAIESFDGCDIKNLATNTVFADGNPKAEMMLIGEAPGANE 120

Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ 181
           ++ G PF G +G +LDKML++I   RT ++IS    W PPGNR  ++ E+ +C+P + + 
Sbjct: 121 DLKGIPFCGASGMLLDKMLKAIGFDRTTVYISNAVFWRPPGNRRPTDFEIAVCKPFVEKH 180

Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATVHPQELIQ 239
           I LI PK+L+ +G+       ++      +  G++         + I T    HP  L++
Sbjct: 181 IALIIPKMLVLVGSTACYAMLDSK-NPISKLRGRFHLYNNQFLQNSITTSIIFHPSYLLR 239

Query: 240 YPLIKKNTWHALITLKKALKNL 261
            P+ K+  W  L  +K+    L
Sbjct: 240 QPMQKRIAWEDLKQIKRYFDGL 261


>gi|254487011|ref|ZP_05100216.1| uracil-DNA glycosylase, C-terminal domain protein [Roseobacter sp.
           GAI101]
 gi|214043880|gb|EEB84518.1| uracil-DNA glycosylase, C-terminal domain protein [Roseobacter sp.
           GAI101]
          Length = 257

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 62/260 (23%), Positives = 116/260 (44%), Gaps = 11/260 (4%)

Query: 5   RILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPL 63
             +   Q L +  +  + G    + D P N     +  ++                    
Sbjct: 2   ESVEYHQALALLHWQIELGATEAICDAPVNRYEVPAAVEKPKPAKPGPGRVVPMAAGIDP 61

Query: 64  VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123
           + +A   A  A +L +L++ +++F  C L   + + + +  T G  +MI+G  P   ++ 
Sbjct: 62  LAEATRFAAAAQTLEDLRAAMQAFEHCELKRGARNMVFSDGTPGARVMIVGEAPGRDEDR 121

Query: 124 SGKPFSGKTGNMLDKMLQSIEIMRTQ----IHISMISPWHPPGNRNLSNIEMEICRPIIM 179
            G+PF G  G +LD+ML +I++ RT     ++I+ + PW PP NR+    E+ + +P ++
Sbjct: 122 EGRPFVGAAGQLLDRMLAAIDMGRTHADAPVYITNVLPWRPPQNRDPKPDEIAMMKPFLI 181

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
           R IEL  P++L+ +GN               +  G+W+ +      +  L   HP  L++
Sbjct: 182 RHIELAKPEVLVIVGNWAAQALLGKRG--ITRLRGQWAQVQ----GLAALPMFHPAYLLR 235

Query: 240 YPLIKKNTWHALITLKKALK 259
            P  K+  W  L+ LK  L 
Sbjct: 236 SPEFKREAWADLLELKARLA 255


>gi|260431599|ref|ZP_05785570.1| uracil-DNA glycosylase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260415427|gb|EEX08686.1| uracil-DNA glycosylase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 279

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 64/261 (24%), Positives = 117/261 (44%), Gaps = 9/261 (3%)

Query: 1   MTSKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHI 59
           M  +  L       +  +  + GV   + D P +         +    +        + +
Sbjct: 24  MGMESALDPFTARALLEWQVELGVTDAIVDTPVDRYALPDTAPKARKAATPLAAPQ-KPV 82

Query: 60  HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSD 119
               V +A   A  A SL +L++ + +F  C L   +   + A  T G  +MI+G  P  
Sbjct: 83  KLDPVAEAKKAAAAASSLDQLRAAMETFAHCDLKRGARQLVFADGTAGAPVMIVGEAPGR 142

Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPII 178
            ++  G+PF G+ G +LD+ML +I++ R   ++I+ + PW PP NR+    E+ + +P +
Sbjct: 143 EEDRVGRPFVGRAGQLLDRMLAAIDLDRAKNVYITNVLPWRPPQNRDPRPDEIAMMQPFV 202

Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238
            R + L  PK+L+ +GN +     N       +  G+W         +P L  +HP  L+
Sbjct: 203 ERHVALSKPKVLVVMGNISCQAVLNKRG--ITRLRGQW----NQALNLPVLPMLHPAYLL 256

Query: 239 QYPLIKKNTWHALITLKKALK 259
           + P  K+  W  L+ L+  L+
Sbjct: 257 RQPHAKRQAWADLLELRAFLE 277


>gi|126727771|ref|ZP_01743601.1| hypothetical protein RB2150_10424 [Rhodobacterales bacterium
           HTCC2150]
 gi|126702898|gb|EBA02001.1| hypothetical protein RB2150_10424 [Rhodobacterales bacterium
           HTCC2150]
          Length = 264

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 62/268 (23%), Positives = 118/268 (44%), Gaps = 16/268 (5%)

Query: 3   SKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDS------AIQPITN 55
            + +        +  +  D GV   + D P N      +  +    +        +P   
Sbjct: 1   MESVFDYHSARAMLEWQIDLGVTETISDAPINRFEAVQEPVKPKATATVENGKPTKPAPP 60

Query: 56  IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115
           ++ +    V +A  +A +A +L EL  +   F  C L   +   + A       L+I+G 
Sbjct: 61  VKPVAVDAVAEAQKLADQATTLEELAKIQSEFEMCDLKKGARKFVFADGNPKSRLLILGE 120

Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR---TQIHISMISPWHPPGNRNLSNIEME 172
            P   ++  G+PF+G+ G +LDKML +I++ R      +++ + PW PP NR+ S  E+ 
Sbjct: 121 APGRDEDQQGRPFAGEAGQLLDKMLAAIDMDRTGENSAYVTNVMPWRPPQNRDPSVEEIA 180

Query: 173 ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATV 232
           +  P + + IEL+SP +++ +GN       +       +  G W+         P +   
Sbjct: 181 MMMPFVSKHIELVSPDVVILMGNVACLAALSKKG--ITRLRGNWATAFER----PVMPIF 234

Query: 233 HPQELIQYPLIKKNTWHALITLKKALKN 260
           HP  L++ P+ K++ W  L+ ++  LK 
Sbjct: 235 HPAYLLRTPVAKRDAWADLLAVQAKLKK 262


>gi|190891014|ref|YP_001977556.1| DNA-directed DNA polymerase (uracil-DNA glycosylase) [Rhizobium
           etli CIAT 652]
 gi|190696293|gb|ACE90378.1| probable DNA-directed DNA polymerase protein (uracil-DNA
           glycosylase) [Rhizobium etli CIAT 652]
          Length = 296

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 91/292 (31%), Positives = 142/292 (48%), Gaps = 32/292 (10%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEP-NNEATY---------------------- 37
           M S   LS  ++  +  F+AD+GV W+ +E   +                          
Sbjct: 1   MISANDLSPAELAALLHFHADAGVEWLLEEEAVDRFAEFEAMKAARRPASAQQERPAAGE 60

Query: 38  --------ESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHD 89
                    S R   +   A              VQQA  +A+ A SL ELK+ + +F+ 
Sbjct: 61  RPSVGERQTSPRPTAAARPAPVSGPQPAIPDGEAVQQARFVAEAARSLGELKTAIEAFNG 120

Query: 90  CHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQ 149
           C+L  ++ STI A+      +M+IG  PS  D+  G PFSGK+G + DKML +I + R+ 
Sbjct: 121 CNLKHSARSTIFASGDAESGIMVIGSAPSAEDDREGLPFSGKSGQLFDKMLAAIGLNRSS 180

Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209
           + ++ + PW PPGNR  S  E++ICRP I RQI L  P+ +L +GN    FF   +    
Sbjct: 181 VLLTQVIPWRPPGNRAASAAEIDICRPFIERQIALAEPQAILLLGNFAARFFLGENDTIH 240

Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
               G+W ++      IP +A++HPQ+L+  P+ K+  W+ L+  +  LK+L
Sbjct: 241 G-LRGRWKDIVIADRAIPAIASLHPQDLLTAPVNKRLAWNDLLAFQAKLKSL 291


>gi|163796468|ref|ZP_02190428.1| Phage SPO1 DNA polymerase-related protein [alpha proteobacterium
           BAL199]
 gi|159178318|gb|EDP62862.1| Phage SPO1 DNA polymerase-related protein [alpha proteobacterium
           BAL199]
          Length = 285

 Score =  216 bits (549), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 77/273 (28%), Positives = 135/273 (49%), Gaps = 21/273 (7%)

Query: 8   SQEQILTIALFYADSGVYW-VFDEPNNEATYESQRKE-KSIDSAIQPITNIRHIHSPLVQ 65
           S+     +  +Y D+GV   + D   +         +  ++ +A +P+  +     P  +
Sbjct: 4   SRAAARALLGWYVDAGVDEPMGDIAVDRFASVRPPPQIPTVAAAAKPVATVAQQAEPQAR 63

Query: 66  Q---------------ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
                           A S A  A +L EL+ +L++F  C L  T+ +T+ A    G  +
Sbjct: 64  PTRPARAAPVDGSLGAARSAAFSAKTLEELRGILQAFDGCPLKVTATNTVFADGVPGAPV 123

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNI 169
           M++G  P   ++ +G+PF G +G +LD+ML +I + R +  +IS + PW PPGNRN ++ 
Sbjct: 124 MVVGEAPGADEDRAGRPFVGLSGQLLDRMLATIGLDRQRNVYISNVLPWRPPGNRNPTDN 183

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP--HSIIP 227
           EM +C P I R IEL +P++L+ +G  +     +   +   +  G+W +   P   + +P
Sbjct: 184 EMAMCLPFIQRHIELAAPRVLVLVGGTSVKTLLD-RQEGITRLRGRWFDWQGPSAAAAVP 242

Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            LAT HP  L++ P  K + W  L+ LK+ L  
Sbjct: 243 ALATYHPAYLLRSPGQKASAWKDLLALKRWLVE 275


>gi|90420838|ref|ZP_01228743.1| uracil-DNA glycosylase, phage SPO1 DNA polymerase-related protein
           [Aurantimonas manganoxydans SI85-9A1]
 gi|90334813|gb|EAS48585.1| uracil-DNA glycosylase, phage SPO1 DNA polymerase-related protein
           [Aurantimonas manganoxydans SI85-9A1]
          Length = 306

 Score =  216 bits (549), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 72/295 (24%), Positives = 127/295 (43%), Gaps = 40/295 (13%)

Query: 5   RILSQEQILTIALFYADSGVYWVF-DEPNNEATY-------------------------- 37
             + +E  + +  +Y  +GV  V  + P +                              
Sbjct: 8   HPIDREAAIALLEWYRAAGVDAVTGEHPRDRFAETQAEIAARKARRGQPAGVAPAATGEP 67

Query: 38  ---------ESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFH 88
                       R  +  +    P   I       V  A   A+ A +L EL++ L  F 
Sbjct: 68  PRPAQEARVAPARTPQPAEEPGFPAPRIAVPDDIAVADARERARSATTLAELRAALDDFD 127

Query: 89  DCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRT 148
            C+L  ++ ST+    +E  D+M++G  P   ++ +G PF G++G +L++ML+SI + R 
Sbjct: 128 GCNLRISARSTVFGDGSETADVMLVGEAPGREEDTAGVPFVGRSGQLLNRMLESIGLERE 187

Query: 149 QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQK 208
            + ++   PW PPGNR  +  E +IC P + R IEL++PKIL+ +G+ +         + 
Sbjct: 188 AVRVTNTVPWRPPGNRPPTPAETQICLPFVQRHIELVAPKILVCLGSPSAKAILGAQ-EG 246

Query: 209 TYQNLGKWSNLCTP---HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
             +  G+W+           I  +A +HP  L++ P  K+  W  LI L++ L  
Sbjct: 247 ILRVRGRWTTYSFGLEQCDAIDAVAMLHPAYLLRQPAQKRLAWRDLIALRERLAQ 301


>gi|254780743|ref|YP_003065156.1| putative uracil-DNA glycosylase [Candidatus Liberibacter asiaticus
           str. psy62]
 gi|254040420|gb|ACT57216.1| putative uracil-DNA glycosylase [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 261

 Score =  216 bits (549), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 261/261 (100%), Positives = 261/261 (100%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60
           MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH
Sbjct: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120
           SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS
Sbjct: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120

Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180
           DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR
Sbjct: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
           QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY
Sbjct: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240

Query: 241 PLIKKNTWHALITLKKALKNL 261
           PLIKKNTWHALITLKKALKNL
Sbjct: 241 PLIKKNTWHALITLKKALKNL 261


>gi|298290634|ref|YP_003692573.1| phage SPO1 DNA polymerase-related protein [Starkeya novella DSM
           506]
 gi|296927145|gb|ADH87954.1| phage SPO1 DNA polymerase-related protein [Starkeya novella DSM
           506]
          Length = 295

 Score =  215 bits (548), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 77/289 (26%), Positives = 126/289 (43%), Gaps = 29/289 (10%)

Query: 1   MTSKRILSQEQILT-IALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPIT---- 54
           +     L+   +L  I  F+ ++GV     ++P +  T  +  +  +    +   +    
Sbjct: 2   LLMAPTLNDRDVLADILAFHVEAGVDVALGEQPVDRFTESAAERSAAAGRVVLAPSAESA 61

Query: 55  ----------------------NIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHL 92
                                            +A   A  A +L  L++LL  F  C L
Sbjct: 62  PAPRPAPPVPAAHRPATPALAGEAPPPPDLAAVEAREAAASAPTLEALEALLEKFDGCPL 121

Query: 93  CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHI 152
             T+   + A       LM++G  P   ++I GKPF G++G +LD+ML +I I RT  +I
Sbjct: 122 KHTATRLVFADGNPQARLMLVGEAPGRDEDIEGKPFVGRSGKLLDRMLAAIGIDRTTAYI 181

Query: 153 SMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN 212
           + + PW PPGNR  +  E  IC P I RQIEL +P +L+ +G  +             + 
Sbjct: 182 ANVVPWRPPGNRTPTPQETAICLPFICRQIELANPDVLVCLGGPSAQTLLGIR-DGITKA 240

Query: 213 LGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
            G+W +  T   +IP LAT HP  L++ PL K+  W  ++ ++  L  L
Sbjct: 241 RGRWMDYDTGSRVIPALATFHPAYLLRSPLGKRMAWRDMLAIEARLAGL 289


>gi|218675319|ref|ZP_03524988.1| probable DNA-directed DNA polymerase protein (uracil-DNA
           glycosylase) [Rhizobium etli GR56]
          Length = 296

 Score =  215 bits (548), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 90/292 (30%), Positives = 141/292 (48%), Gaps = 32/292 (10%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEP-NNEATYES-------------------- 39
           M S   LS  ++  +  F+AD+GV W+ +E   +                          
Sbjct: 1   MISANDLSPAELAALLHFHADAGVEWLLEEEAVDRFAEFEAMKAARRPASAQQERPAVGE 60

Query: 40  ----------QRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHD 89
                      R   +   A              VQQA  +A+ A SL ELK+ + +F+ 
Sbjct: 61  RPNSGERQTLPRPTAAARPAPVSGPQPAIPDGEAVQQARFVAEAARSLAELKTAIEAFNG 120

Query: 90  CHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQ 149
           C+L  ++ STI A+      +M+IG  PS  D+  G PFSGK+G + DKML +I + R+ 
Sbjct: 121 CNLKHSARSTIFASGDAESGIMVIGSAPSAEDDREGLPFSGKSGQLFDKMLAAIGLNRSS 180

Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209
           + ++ + PW PPGNR  S  E++ICRP I RQI L  P+ +L +GN    FF   +    
Sbjct: 181 VLLTQVIPWRPPGNRAASAAEIDICRPFIERQIALAEPQAILLLGNFAARFFLGENDTIH 240

Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
               G+W ++      IP +A++HPQ+L+  P+ K+  W+ L+  +  LK+L
Sbjct: 241 G-LRGRWKDIVIADRAIPAIASLHPQDLLTAPVNKRLAWNDLLAFQAKLKSL 291


>gi|170743515|ref|YP_001772170.1| phage SPO1 DNA polymerase-related protein [Methylobacterium sp.
           4-46]
 gi|168197789|gb|ACA19736.1| phage SPO1 DNA polymerase-related protein [Methylobacterium sp.
           4-46]
          Length = 300

 Score =  215 bits (548), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 76/297 (25%), Positives = 120/297 (40%), Gaps = 45/297 (15%)

Query: 8   SQEQILTIALFYADSGVYWVFDE-PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQ 66
               +L    F+  +GV    DE P++     + R   + +S   P +       P  + 
Sbjct: 3   DDRDLLAYLDFHVAAGVDAALDEAPHDRFAESASRGRPASESRPAPESRPAPEPRPTPES 62

Query: 67  -------------------------------------------ADSIAQKACSLHELKSL 83
                                                      A  +A+ A +L EL+ L
Sbjct: 63  RPTPEPRPAAEPVPAPAAAPRPPARASTFGRSAAAEPGEAAGDARELARTAATLEELEQL 122

Query: 84  LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143
           L  F  C L  T+ + + A       +M +G  P   ++  GKPF G++G +LD+M+ +I
Sbjct: 123 LARFESCPLRFTAKNLVFADGEPTARVMFVGEAPGADEDRVGKPFMGRSGQLLDRMMAAI 182

Query: 144 EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
            + RT  ++  + PW PPGNRN +  E+  C+P I RQI L  P IL+ +G         
Sbjct: 183 GLDRTNAYVGNVVPWRPPGNRNPTPQEIATCKPFIERQIALADPDILVCLGGVATQT-LA 241

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
                  ++ G+W    T    I  LAT+HP  L++ PL K+  W     L+ AL  
Sbjct: 242 ATKDGILKSRGRWFPYRTERREIRLLATLHPAYLLRQPLQKRLAWRDFRVLRAALDA 298


>gi|56695203|ref|YP_165551.1| uracil-DNA glycosylase [Ruegeria pomeroyi DSS-3]
 gi|56676940|gb|AAV93606.1| uracil-DNA glycosylase [Ruegeria pomeroyi DSS-3]
          Length = 261

 Score =  215 bits (548), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 64/266 (24%), Positives = 115/266 (43%), Gaps = 14/266 (5%)

Query: 3   SKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYES------QRKEKSIDSAIQPITN 55
            +  L     L +  +  + GV   + D P +             +          P   
Sbjct: 1   MESALDPHTALALLQWQVELGVTETILDAPLDRYALPETAPRPPAQAAADPRRPAMPAPP 60

Query: 56  IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115
            +       Q+A   A+   SL  L++ L  F  C L   + + + A    G  +MIIG 
Sbjct: 61  PKAPEVDPAQEAVRAARAVGSLDALRTALAEFEHCELKRGARNLVFADGVPGARVMIIGE 120

Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEIC 174
            P   ++  G+PF G+ G +LD+ML +I + R++  +I+ + PW PP NR+   +E+ + 
Sbjct: 121 APGRDEDREGRPFVGRAGQLLDRMLAAIGLSRSESVYITNVLPWRPPQNRDPLPVEIGMM 180

Query: 175 RPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHP 234
           +P + R + L  P++L+ +GN +             +  G+W    T    +P L   HP
Sbjct: 181 KPFLERHVALAKPEVLVLMGNISCETVLGRRG--ITRLRGQW----TQAMGLPVLPMFHP 234

Query: 235 QELIQYPLIKKNTWHALITLKKALKN 260
             L++ P +K+  W  L+ L+  L+ 
Sbjct: 235 AYLLRQPQMKRQAWADLLELQAKLRE 260


>gi|89070681|ref|ZP_01157950.1| uracil-DNA glycosylase [Oceanicola granulosus HTCC2516]
 gi|89043702|gb|EAR49906.1| uracil-DNA glycosylase [Oceanicola granulosus HTCC2516]
          Length = 261

 Score =  215 bits (548), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 58/256 (22%), Positives = 105/256 (41%), Gaps = 13/256 (5%)

Query: 11  QILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADS 69
                  +  + G      D P +    ++ R + +   A      +       V +A  
Sbjct: 9   AAKAALDWQIELGADEAIGDAPVDRYALDAARAKPTAPVAAPNAVPVPAAPDDPVAEARR 68

Query: 70  IAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129
           +A  A  L  L + +  F  C L + + S +         LMI+G  P   ++ +G+PF 
Sbjct: 69  LAAGARDLGGLAAAMEGFEHCALKAGARSFVFCDGNPDARLMIVGEAPGREEDRAGRPFV 128

Query: 130 GKTGNMLDKMLQSIEIMRTQI------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIE 183
           G+ G +LD+ML +I + R         +I+ + PW PP NR     E+ +  P +   I 
Sbjct: 129 GRAGQLLDRMLAAIGMARAAPDAAHAVYITNVLPWRPPENRRPERAEIAMFLPFLEAHIA 188

Query: 184 LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI 243
           L  P++L+ +GN   +           +  G W+ +      +P L   HP  L++ P  
Sbjct: 189 LARPEVLVLMGNTPCDALLGRSG--ITRMRGSWTEV----LGVPALPMFHPAFLLRQPQA 242

Query: 244 KKNTWHALITLKKALK 259
           K+  W  L+ ++  L+
Sbjct: 243 KREAWADLLDVQARLR 258


>gi|153009985|ref|YP_001371200.1| phage SPO1 DNA polymerase-like protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151561873|gb|ABS15371.1| phage SPO1 DNA polymerase-related protein [Ochrobactrum anthropi
           ATCC 49188]
          Length = 285

 Score =  214 bits (546), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 83/276 (30%), Positives = 128/276 (46%), Gaps = 26/276 (9%)

Query: 11  QILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHI----------- 59
            I  +  FYA++G+     E   +   E QR   S  +A  P +  R             
Sbjct: 9   DIEGLLRFYAEAGIDMPLSETPIDRFAEPQRPASSQPTAQMPNSPERARQQQPRPAPAPA 68

Query: 60  -HSPLVQQADSIAQKAC------------SLHELKSLLRSFHDCHLCSTSLSTICATQTE 106
             S  VQ A  +   A             +L EL+  L +F  C+L  T+ +   A    
Sbjct: 69  PTSKPVQAAADLPDTAQIALAREAAAQASTLEELREKLAAFDGCNLKFTAKNLCFADGDP 128

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL 166
             D+M IG  P   +++ G PF GK+G +L++M++SI++ R  ++I+   PW PPGNR  
Sbjct: 129 SSDIMFIGQAPGRDEDMEGLPFVGKSGQLLNRMIESIDLKRESVYIANTIPWRPPGNRTP 188

Query: 167 SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS-I 225
           + +E E+CRP I RQIEL SPK+L+ +G            +   +  G W    TP+   
Sbjct: 189 TPLETELCRPFIERQIELASPKVLVALGGPAGKALTGAT-EGILRLRGNWKIHRTPNGLE 247

Query: 226 IPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
           IP + T+HP  L++ P  K+  W   + +K  L  L
Sbjct: 248 IPVMPTLHPAYLLRTPAQKRFAWRDFLAVKLKLAEL 283


>gi|83952423|ref|ZP_00961154.1| uracil-DNA glycosylase [Roseovarius nubinhibens ISM]
 gi|83836096|gb|EAP75394.1| uracil-DNA glycosylase [Roseovarius nubinhibens ISM]
          Length = 267

 Score =  214 bits (546), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 65/272 (23%), Positives = 112/272 (41%), Gaps = 19/272 (6%)

Query: 3   SKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQ------PITN 55
               L       +  +  + G      D P +    E +  + +  +A         +  
Sbjct: 1   MDSALDFHTARALLEWQVELGADEAIGDSPVDRYALEPRAPKPATPAAAPSPAEAAKLPP 60

Query: 56  IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115
           +    +  V +A   A  A  L  LK+ +  +  C L   +   + +    G  +M+IG 
Sbjct: 61  VAAPKTDPVAEARKSALAAQDLAGLKAAMAGYEHCELKRGARQLVFSDGHPGARVMLIGE 120

Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR------TQIHISMISPWHPPGNRNLSNI 169
            P   ++ +GKPF G+ G MLD+ML +I + R         +I+ + PW PP NR+ S  
Sbjct: 121 APGRDEDRAGKPFVGQAGQMLDRMLAAIGLDRGSDDPGQGAYITNVMPWRPPQNRDPSPE 180

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E+ +  P + R + L +P +LL +GN +             +  G W+         P L
Sbjct: 181 EIAMMVPFMERHVALANPDLLLLVGNISCQAGLGKRG--ITRLRGNWTEAYGK----PAL 234

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
              HP  L++ P  K+  W  L++LK  L+ L
Sbjct: 235 PIFHPAYLLRMPSAKREAWADLLSLKARLQGL 266


>gi|327193963|gb|EGE60838.1| putative DNA-directed DNA polymerase protein (uracil-DNA
           glycosylase) [Rhizobium etli CNPAF512]
          Length = 296

 Score =  214 bits (546), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 91/292 (31%), Positives = 142/292 (48%), Gaps = 32/292 (10%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEP-NNEATY---------------------- 37
           M S   LS  ++  +  F+AD+GV W+ +E   +                          
Sbjct: 1   MISANDLSPAELAALLHFHADAGVEWLLEEEAVDRFAEFEAMKAARRPASAQQERPAAGE 60

Query: 38  --------ESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHD 89
                    S R   +   A              VQQA  +A+ A SL ELK+ + +F+ 
Sbjct: 61  SPSVGERQTSPRLTAAARPAPVSGPQPAIPDGEAVQQARFVAEAARSLGELKTAIEAFNG 120

Query: 90  CHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQ 149
           C+L  ++ STI A+      +M+IG  PS  D+  G PFSGK+G + DKML +I + R+ 
Sbjct: 121 CNLKHSARSTIFASGDAESGIMVIGSAPSAEDDREGLPFSGKSGQLFDKMLAAIGLNRSS 180

Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209
           + ++ + PW PPGNR  S  E++ICRP I RQI L  P+ +L +GN    FF   +    
Sbjct: 181 VLLTQVIPWRPPGNRAASAAEIDICRPFIERQIALAEPQAILLLGNFAARFFLGENDTIH 240

Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
               G+W ++      IP +A++HPQ+L+  P+ K+  W+ L+  +  LK+L
Sbjct: 241 G-LRGRWKDIVIADRAIPAIASLHPQDLLTAPVNKRLAWNDLLAFQAKLKSL 291


>gi|85859396|ref|YP_461598.1| uracil DNA glycosylase superfamily protein [Syntrophus
           aciditrophicus SB]
 gi|85722487|gb|ABC77430.1| uracil DNA glycosylase superfamily protein [Syntrophus
           aciditrophicus SB]
          Length = 263

 Score =  214 bits (546), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 103/237 (43%), Gaps = 6/237 (2%)

Query: 26  WVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQ--ADSIAQKACSLHELKSL 83
           W    P +  T E  +K   +   +    + + +   L+             +L +++  
Sbjct: 29  WELRHPLSWTTAEGDQKSPFLGMKLASGVHEQDVKESLISSDITGPADNPLETLDDIRRD 88

Query: 84  LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143
           + + H C L  T  + +        +L+ +G  P   +++ G+PF G+ G++L +++ ++
Sbjct: 89  MEACHRCPLEKTRKNLVFGEGNPHSELVFVGEAPGADEDLQGRPFVGRAGHLLTRIIDAM 148

Query: 144 EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
            + R  ++I  I    PPGNRN    E+E+C P ++RQ+E I P+I+  +G         
Sbjct: 149 GLKREDVYICNILKCRPPGNRNPLPEEIEVCEPWLIRQLEAIRPRIICALGTFAAQTLLK 208

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
                     G++ +       I  + T HP  L++ P  K+  W  +  + K L+ 
Sbjct: 209 KKGIPITVLRGQFHDY----HGIKLMPTYHPAYLLRNPGAKRQVWEDVQKIMKVLEA 261


>gi|209548539|ref|YP_002280456.1| phage SPO1 DNA polymerase-related protein [Rhizobium leguminosarum
           bv. trifolii WSM2304]
 gi|209534295|gb|ACI54230.1| phage SPO1 DNA polymerase-related protein [Rhizobium leguminosarum
           bv. trifolii WSM2304]
          Length = 299

 Score =  214 bits (544), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 97/295 (32%), Positives = 149/295 (50%), Gaps = 35/295 (11%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDE-----------------PNNEATYESQ--- 40
           M S   LS  ++  +  F+AD+GV W+ +E                 P  +    +    
Sbjct: 1   MISANDLSPAELAALLHFHADAGVEWLLEEEAIDRFAEFEAMKAARRPAAQTQPSAAGER 60

Query: 41  ------RKEKSIDSAIQPITNIRHIHSP--------LVQQADSIAQKACSLHELKSLLRS 86
                 R      +A++P    R    P         VQQA  +A+ A SL ELK+ + +
Sbjct: 61  TPLGENRTPPRPATAVRPAPAERAASGPQPAIPDGEAVQQARFVAESARSLAELKTAIEA 120

Query: 87  FHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM 146
           F+ C+L  ++ STI A+      +M+IG  P   D+  G PFSGK+G + DKML +I + 
Sbjct: 121 FNGCNLKHSARSTIFASGDAESGIMVIGSAPGAEDDREGVPFSGKSGQLFDKMLAAIGLT 180

Query: 147 RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206
           R+ I ++ + PW PPGNR  S  EM+ICRP I RQI L  PK +L +GN +  FFF  + 
Sbjct: 181 RSVILLTQVIPWRPPGNRAPSAAEMDICRPFIERQIALAQPKAILLLGNFSARFFFGEND 240

Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
                  G+W  +     +IP +A++HPQ+L+  P+ K+  W+ L+  +  LK+L
Sbjct: 241 TIHG-LRGRWKEIAAADCVIPAIASLHPQDLLTAPVNKRLAWNDLLAFQAKLKSL 294


>gi|154246315|ref|YP_001417273.1| phage SPO1 DNA polymerase-related protein [Xanthobacter
           autotrophicus Py2]
 gi|154160400|gb|ABS67616.1| phage SPO1 DNA polymerase-related protein [Xanthobacter
           autotrophicus Py2]
          Length = 307

 Score =  214 bits (544), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 76/306 (24%), Positives = 123/306 (40%), Gaps = 47/306 (15%)

Query: 1   MTSKRILSQEQ----ILTIALFYADSGVY-WVFDEPNNEATYESQRKEKS---------- 45
           MT+      E     I  I  FY ++GV   V + P +     +  + +S          
Sbjct: 1   MTATPQDHPEDHLSDIADILAFYLEAGVDVAVGEAPVDRFAESAAEQARSRTQRPPAVPA 60

Query: 46  -------------------------------IDSAIQPITNIRHIHSPLVQQADSIAQKA 74
                                            SA      +       V  A   A+ A
Sbjct: 61  PDMPPPPTVSRPQASARPAPPAAPAPRSGTLSASAAGASALVTQPPDEAVMSAREAARNA 120

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            SL  L+++L  F  C L  T+   + A       +M +G  P   ++  G PF G++G 
Sbjct: 121 ESLDALRAILDGFEGCALKRTATRLVFADGNPKAKVMFVGEAPGRDEDQQGLPFVGRSGR 180

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           +LD M+ +I + RT  +I+ + PW PPGNR  +  E  +C P I RQIEL  P IL+ +G
Sbjct: 181 LLDLMMAAIGLDRTSAYIANVIPWRPPGNRTPTPQETAVCLPFIKRQIELADPDILVCLG 240

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
             +         +   +  G++ +  +    I  +AT HP  L++ PL K+  W  ++ +
Sbjct: 241 GPSAQALLA-TTEGITRLRGRFMDYESGTRTIRAIATFHPAYLLRTPLGKRLAWRDMLAV 299

Query: 255 KKALKN 260
           + AL N
Sbjct: 300 EAALAN 305


>gi|110680596|ref|YP_683603.1| uracil-DNA glycosylase, C-terminal [Roseobacter denitrificans OCh
           114]
 gi|109456712|gb|ABG32917.1| uracil-DNA glycosylase, C-terminal [Roseobacter denitrificans OCh
           114]
          Length = 259

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 65/260 (25%), Positives = 117/260 (45%), Gaps = 13/260 (5%)

Query: 8   SQEQILTIALFYADSGV-YWVFDEPNNEATYES--QRKEKSIDSAIQPITNIRHIHSPLV 64
                L +  +  + G    + + P N        Q K+K+  + + P        +  V
Sbjct: 5   DFHHALALLDWQIELGATEAIGETPVNRYDLPDKIQPKQKAAQTTVAPAAARAAEKTDPV 64

Query: 65  QQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNIS 124
             A   A  A  L +L++ L  F  C L   + + + +    G  +M+IG  P   +++ 
Sbjct: 65  DAARKAAFAAQDLDQLRAALAGFEHCDLKRGARNLVFSDGVAGARVMVIGEAPGREEDLQ 124

Query: 125 GKPFSGKTGNMLDKMLQSIEIMR----TQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180
           G+PF G+ G +LD+ML +I++ R      ++I+ + PW PP NR+ S+ E+ + RP + R
Sbjct: 125 GRPFVGRAGQLLDRMLAAIDMGRDRQSDPVYITNVVPWRPPQNRDPSSDEIAMMRPFVER 184

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
            I L  P++L+ +GN +             +  G+W         +P L   HP  L++ 
Sbjct: 185 HIALAKPEVLVIMGNVSAQALLGKRG--ITRLRGQWVEAF----GVPALPMFHPAYLLRN 238

Query: 241 PLIKKNTWHALITLKKALKN 260
              K+  W  L++L+  L N
Sbjct: 239 TAAKREAWADLLSLQARLHN 258


>gi|254467145|ref|ZP_05080556.1| uracil-DNA glycosylase [Rhodobacterales bacterium Y4I]
 gi|206688053|gb|EDZ48535.1| uracil-DNA glycosylase [Rhodobacterales bacterium Y4I]
          Length = 250

 Score =  213 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 66/257 (25%), Positives = 112/257 (43%), Gaps = 10/257 (3%)

Query: 7   LSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQ 65
           +       +  + A+ G    + D P +    E    +    +A  P    +      V 
Sbjct: 1   MDYWSARALLEWQAELGATEALCDAPVDRYALEQAAPKPKPGAAPAPPPKPKEADPAEV- 59

Query: 66  QADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISG 125
            A   A+ A SL  L+  L +F  C L   + + + +    G  +MIIG  P   +++ G
Sbjct: 60  -AQKAARGAASLPALRDALAAFDHCDLKRGARNLVFSDGQPGARVMIIGEAPGRDEDLQG 118

Query: 126 KPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIEL 184
           KPF G+ G +LD+ML++I + R   ++I+ + PW PP NR+    E+ +  P + R + L
Sbjct: 119 KPFVGRAGQLLDRMLEAIGLSRAENVYITNVLPWRPPQNRDPLPAEIAMLTPFLERHVAL 178

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK 244
             P IL+ +GN +             +  G+W          P +   HP  L++ P  K
Sbjct: 179 AEPDILVLMGNISCQAVLGKRG--ITRLRGQWDQAWNK----PVIPMFHPAYLLRQPAQK 232

Query: 245 KNTWHALITLKKALKNL 261
           +  W  L+ LK  L +L
Sbjct: 233 RLAWADLLELKARLGSL 249


>gi|118590804|ref|ZP_01548205.1| hypothetical protein SIAM614_06538 [Stappia aggregata IAM 12614]
 gi|118436780|gb|EAV43420.1| hypothetical protein SIAM614_06538 [Stappia aggregata IAM 12614]
          Length = 320

 Score =  212 bits (540), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 73/298 (24%), Positives = 125/298 (41%), Gaps = 46/298 (15%)

Query: 8   SQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQ--------------- 51
               +  +  FYA +GV     D+P +       +  +   +  Q               
Sbjct: 20  DPRHLEALLDFYAGAGVDCFLQDDPVDWVALTRAQAAQRAQAGSQVASSAQPQQPRQQTP 79

Query: 52  -----------------------PITNIRHIHSPLVQQADSIAQKA------CSLHELKS 82
                                   +       SP++   + IA          +L EL++
Sbjct: 80  ASNFQGQATAPPVPAAPIAAQIGAVPPASMGQSPVLPDREIIAAARDLAASAPTLDELRN 139

Query: 83  LLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142
            L +F  C+L  T+   + A       LM +G  P   +++ G PF G++G +LD+ML +
Sbjct: 140 CLSAFEGCNLKLTAKKLVFADGNPEAKLMFVGEAPGRDEDLQGLPFVGRSGQLLDRMLAA 199

Query: 143 IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202
           I + R+  +I+ + PW PPGNR  +  E EIC+P I+RQIEL++P +L+F+G  +     
Sbjct: 200 IGLDRSSAYIANVVPWRPPGNRTPTPQETEICKPFILRQIELVNPDVLVFLGAASAKTLL 259

Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
                   +  G+W         I  +AT HP  L++ PL K+ +W   + +K+ L  
Sbjct: 260 GVQ-DGIRKMRGRWMTYPCKGREISAIATYHPAYLLRSPLEKRLSWRDFLAIKQKLGE 316


>gi|94970801|ref|YP_592849.1| phage SPO1 DNA polymerase-related protein [Candidatus Koribacter
           versatilis Ellin345]
 gi|94552851|gb|ABF42775.1| phage SPO1 DNA polymerase-related protein [Candidatus Koribacter
           versatilis Ellin345]
          Length = 273

 Score =  212 bits (540), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 57/264 (21%), Positives = 102/264 (38%), Gaps = 10/264 (3%)

Query: 3   SKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSP 62
             R L Q  +     FY + G+Y ++  P + AT  S+  E   +  +     +      
Sbjct: 1   MARTLDQNALSARLEFYREMGIYGLYRRPVD-ATAVSENPETPDEQYLPKKKEVTVTAEK 59

Query: 63  LVQQADSIAQKACSLHELKSLLRSFHDCHLCS-TSLSTICATQTEGQDLMIIGYTPSDSD 121
            +        K   L  ++  L     C L        +        +LM +G  P   +
Sbjct: 60  TLNVLQPTLSKPDGLKAIREDLGDCTRCVLHKQGRKQIVFGVGNPSAELMFVGEGPGADE 119

Query: 122 NISGKPFSGKTGNML-DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180
           +  G PF G+ G +L + +   + + R  ++I+ +    PPGNR     E + C P + R
Sbjct: 120 DEQGIPFIGRAGQLLTNMITNGMGLKREDVYIANVVKCRPPGNRTPEREECDTCSPFLFR 179

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI------IPTLATVHP 234
           QIE+I PK+++ +G          + +   +  G+  +  TP            + T HP
Sbjct: 180 QIEVIQPKMIVALGAVAAKTLLGVN-EAMARLRGQIYDFSTPRRPGSDLYDGKLVVTYHP 238

Query: 235 QELIQYPLIKKNTWHALITLKKAL 258
             L++ P  K   W  L  + + L
Sbjct: 239 AYLLRDPRQKSEAWKDLQIVMRYL 262


>gi|114777353|ref|ZP_01452350.1| phage SPO1 DNA polymerase domain protein [Mariprofundus
           ferrooxydans PV-1]
 gi|114552135|gb|EAU54637.1| phage SPO1 DNA polymerase domain protein [Mariprofundus
           ferrooxydans PV-1]
          Length = 252

 Score =  212 bits (539), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 60/249 (24%), Positives = 100/249 (40%), Gaps = 15/249 (6%)

Query: 18  FYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKA--- 74
           +  + GV      P +  +  +Q  +  +  A QP        + L  Q  + A  A   
Sbjct: 11  YLREIGV----QTPVSLLSL-AQETQPPVAPAAQPSPVESEPAAALESQVSTPAPAADTV 65

Query: 75  --CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
              SL EL +   +   C L  T    +        DL+ IG  P   +++ G+PF G+ 
Sbjct: 66  VFKSLDELSATASTCRLCSLADTRTQVVFGVGNPQADLVFIGEAPGRDEDLQGEPFVGRA 125

Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192
           G +LD+M+ +I + R  ++I       PP NR+    E++ C     +Q++ + PK++  
Sbjct: 126 GQLLDRMMAAIGLDRDAVYIMNTIKCRPPNNRDPRADEVKACNLWFEQQLDALQPKMICL 185

Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
           +G          DA       G W         IP   T HP  L++ P  K+  W  L 
Sbjct: 186 LGRVAAQTVLGTDATL-GALRGAWHEY----HGIPVWVTYHPAYLLRSPQQKQKGWQDLC 240

Query: 253 TLKKALKNL 261
            L    ++L
Sbjct: 241 LLADRYRDL 249


>gi|114705011|ref|ZP_01437919.1| hypothetical protein FP2506_08741 [Fulvimarina pelagi HTCC2506]
 gi|114539796|gb|EAU42916.1| hypothetical protein FP2506_08741 [Fulvimarina pelagi HTCC2506]
          Length = 308

 Score =  212 bits (539), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 80/295 (27%), Positives = 128/295 (43%), Gaps = 44/295 (14%)

Query: 10  EQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPITNIRHIHS------- 61
            Q + +  FY+++G+   + D P +         E+       P T  +           
Sbjct: 12  NQAIALLNFYSEAGIDTFWGDHPRDRFAETRAEIERRSGGRGSPATTTQPTRRNEEASPQ 71

Query: 62  --------------------------------PLVQQADSIAQKACSLHELKSLLRSFHD 89
                                             +  A   A+ A SL EL+  LRSF  
Sbjct: 72  ASPAAASAPVRDARLDEAQAGFPAPSLPISGDAAIADARERARSAASLAELEDALRSFEG 131

Query: 90  CHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQ 149
           C L  T+ S +     E  DLM++G  P   +++ G+PF GK+G +LD+ML SI + R  
Sbjct: 132 CALRVTAKSCVFGNGREDADLMLVGEAPGRDEDLEGEPFVGKSGQLLDRMLLSIGLEREA 191

Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209
           + ++   PW PPGNR  + +E  +C P + R IEL+ PKIL+ +GN       +   +  
Sbjct: 192 VRVTNTVPWRPPGNRQPTPVETAMCLPFLQRHIELVRPKILVALGNPASIALLDAK-EGI 250

Query: 210 YQNLGKWSNLCTP---HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
            +  GKW +       +  IP +A +HP  L++ P  K+  W  L+ LK  L++L
Sbjct: 251 LRLRGKWKSYTMGLGENDQIPAMAMLHPAYLLRNPAQKRLAWRDLLMLKAKLEDL 305


>gi|227821368|ref|YP_002825338.1| DNA polymerase [Sinorhizobium fredii NGR234]
 gi|227340367|gb|ACP24585.1| DNA polymerase [Sinorhizobium fredii NGR234]
          Length = 293

 Score =  212 bits (539), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 86/292 (29%), Positives = 138/292 (47%), Gaps = 35/292 (11%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATY--------------ESQRKEKS 45
           M S   LS  ++  +  F+A++GV W+  DEP +                     R+   
Sbjct: 1   MISANDLSASELAALLAFHAEAGVEWLLEDEPVDRLAEFEAMKAKRADARAAPPVRQATP 60

Query: 46  I-------------------DSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRS 86
                                +A      +       V +A   A+ A SL EL++ + +
Sbjct: 61  PEVQGGRVQPATSGKARDARPAAPSVPPTVAIPDEQAVSEARFAAESARSLAELRTAMEA 120

Query: 87  FHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM 146
           F  C+L +++ + + A       +M++G  P   D+  G+PF+G+ G+ML++ML  I + 
Sbjct: 121 FTGCNLKNSARNLVFADGNAASGIMVVGPMPYAEDDRDGQPFAGRHGDMLERMLSGIGLS 180

Query: 147 RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206
           R+ I ++ + PW PPGNR  S  E +ICRP I RQI L  P+ +L +GN T  FFF  + 
Sbjct: 181 RSDILLTNVVPWRPPGNRVPSGREADICRPFIERQIALAEPRHMLLLGNFTARFFFGTNE 240

Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
               Q  G+W  L     ++P LAT+HPQ+LI  P+ K+  W  L+  K  +
Sbjct: 241 TIH-QTRGQWRELSAGGHLVPALATLHPQDLISAPVNKRFAWQDLLAFKARI 291


>gi|149200965|ref|ZP_01877940.1| uracil-DNA glycosylase [Roseovarius sp. TM1035]
 gi|149145298|gb|EDM33324.1| uracil-DNA glycosylase [Roseovarius sp. TM1035]
          Length = 267

 Score =  211 bits (537), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 63/270 (23%), Positives = 116/270 (42%), Gaps = 18/270 (6%)

Query: 3   SKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHS 61
            + +LS    L   ++  + G    + D P N      +  + +     +         S
Sbjct: 1   MESMLSPHDALASLIWQIELGATEAIGDAPINRYELPEKVAKPAAVPKTEAKPAALTAPS 60

Query: 62  -----PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYT 116
                  V+ A + A  A  L  L++ L ++  C L   + + +         +MIIG  
Sbjct: 61  LGAGVDPVEVARAAAAAAMDLEGLRAALGAYPHCDLRRGARNLVFGDGNPAARVMIIGEA 120

Query: 117 PSDSDNISGKPFSGKTGNMLDKMLQSIEIMR------TQIHISMISPWHPPGNRNLSNIE 170
           P   ++  GKPF G+ G +LD+M+Q+I + R        ++I+ + PW PP NR+ +  E
Sbjct: 121 PGRDEDQQGKPFVGRAGQLLDRMVQAIGLSRGAQAPQDAVYITNVLPWRPPQNRDPNAEE 180

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230
           + + RP + R + L++P +++ +GN +             +  G+W+         P L 
Sbjct: 181 IAMMRPFVARHVALVNPAVIVLMGNISCEAGLGQRG--ITRLRGQWAEAYGK----PALP 234

Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALKN 260
             HP  L++ P  K+  W  L+ LK  L+ 
Sbjct: 235 MFHPAYLLRNPAAKREAWADLLALKARLRE 264


>gi|126740581|ref|ZP_01756268.1| uracil-DNA glycosylase [Roseobacter sp. SK209-2-6]
 gi|126718382|gb|EBA15097.1| uracil-DNA glycosylase [Roseobacter sp. SK209-2-6]
          Length = 264

 Score =  211 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 62/261 (23%), Positives = 110/261 (42%), Gaps = 10/261 (3%)

Query: 3   SKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNI--RHI 59
            +  L       +  +  + G    + + P +  + +    +K+  +  +       +  
Sbjct: 1   MESALDYWSAKALLEWQVELGATEALSEAPIDRYSLQPSAPQKTASNKSRTPEPAVEKPK 60

Query: 60  HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSD 119
               V  A   AQ A SL  LK  +  F  C L   + + + +    G ++M+IG  P  
Sbjct: 61  PVDPVAVARKAAQAASSLPALKEAIAGFEHCGLKRGARNLVFSDGQAGANVMVIGEAPGR 120

Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPII 178
            +++ GKPF G+ G MLD+ML +I + R++  +I+ + PW PP NR+    E+ +  P +
Sbjct: 121 DEDLQGKPFVGRAGQMLDRMLTAIGLSRSENVYITNVLPWRPPQNRDPQAEEIAMMMPFL 180

Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238
            R + L  P  L+ +GN +             +  G W          P +   HP  L+
Sbjct: 181 ERHVALAQPDFLVLMGNISCQAVLGKRG--ITRLRGNW----DQAWGKPVMPMFHPAFLL 234

Query: 239 QYPLIKKNTWHALITLKKALK 259
           + P  K+  W  L+ LK  L 
Sbjct: 235 RQPHQKRQAWADLLELKARLN 255


>gi|15888330|ref|NP_354011.1| DNA polymerase [Agrobacterium tumefaciens str. C58]
 gi|15156000|gb|AAK86796.1| DNA polymerase [Agrobacterium tumefaciens str. C58]
          Length = 296

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 90/296 (30%), Positives = 135/296 (45%), Gaps = 37/296 (12%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDE-PNNEATYESQRKEKSIDSAIQPITNI--- 56
           M +   LS  ++  +  F+AD+GV W+ +E P +     +  +      A  P       
Sbjct: 1   MIAAHDLSPAELAALLHFHADAGVDWMLEEAPVDRFAEFAAARPMPGQDAATPARQAQSP 60

Query: 57  --------------------------------RHIHSPLVQQADSIAQKACSLHELKSLL 84
                                                  V  A   A+ A SL EL++ L
Sbjct: 61  ADRRTDAPQRQAPGRSAPARGAPAAPAIQQNVAMPDEQAVSAARFAAESARSLGELRTAL 120

Query: 85  RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIE 144
             F+ C+L +++ +TI +       +M+IG  P   D+  G PF+GKTG +L++ML +I 
Sbjct: 121 EGFNGCNLKNSARNTIFSEGDPASAIMVIGPMPDADDDREGTPFAGKTGQLLERMLAAIG 180

Query: 145 IMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204
           + R+ I I  + PW PPGNR  +  EM+ICRP I RQI L  PK LL +GN T  FFF  
Sbjct: 181 LERSAIMIGNVVPWRPPGNRPPTQAEMDICRPFIERQIALAEPKHLLLLGNFTARFFFGG 240

Query: 205 DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
                    G+W ++   H I+P LA++HPQEL+  P  K   W  L+  +  +  
Sbjct: 241 TGTIHT-LRGQWRDVAAGHLILPALASLHPQELLNAPASKSLAWQDLLAFQTKITE 295


>gi|88606724|ref|YP_505870.1| uracil-DNA glycosylase [Anaplasma phagocytophilum HZ]
 gi|88597787|gb|ABD43257.1| uracil-DNA glycosylase, family 4 [Anaplasma phagocytophilum HZ]
          Length = 290

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 65/283 (22%), Positives = 122/283 (43%), Gaps = 25/283 (8%)

Query: 1   MTSK-RILSQEQI---LTIALFYADSGVYWVFD---EPNNEATYESQRKEKSIDSAIQPI 53
           MT +    + E I     +  FY DSGV    +    P++  +  +  K   +    +  
Sbjct: 1   MTDEHNKPNVEDIKMFAEVLRFYHDSGVTHTLNDDLHPDDTLSPANFEKSPVVPDRAKTR 60

Query: 54  TNIRHIHS--------------PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLST 99
            +   + +                V++A   A     L EL++ + +F  C +   +++T
Sbjct: 61  ESQEIVLNKTSNKKSSSNANMLQWVEEARKAAANCVDLAELRAAVCAFEGCEIKKAAVNT 120

Query: 100 ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPW 158
           + +       +M+IG  P  +++  G PF G +G +LDKM  +I + R + I+IS    W
Sbjct: 121 VFSDGNPKSKIMLIGEAPGSTEDREGIPFCGASGQLLDKMFAAINLNRSSNIYISNTVFW 180

Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218
            PPGNR  ++ E+E+CRP + + I L+ P +++ +G+               +  GK+  
Sbjct: 181 RPPGNRKPTDFELEVCRPFVEKHISLVDPDVVVMVGSTACYSLLQ-TPDNISRLRGKFYE 239

Query: 219 LCTPH--SIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
                    I  +   HP  L++ P  K+  W  L  L+  ++
Sbjct: 240 YTNSFLSRSITAMVIFHPAYLLRQPQQKRLAWEDLKMLRAYIE 282


>gi|126734673|ref|ZP_01750419.1| phage SPO1 DNA polymerase-related protein [Roseobacter sp. CCS2]
 gi|126715228|gb|EBA12093.1| phage SPO1 DNA polymerase-related protein [Roseobacter sp. CCS2]
          Length = 263

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 60/257 (23%), Positives = 112/257 (43%), Gaps = 17/257 (6%)

Query: 14  TIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQP----ITNIRHIHSPLVQQAD 68
            +  +  + G    + D P +    E+ +    + +A +         +      V  A 
Sbjct: 12  ALLEWQVELGATDAILDAPVDRYALEAAKPAPKVAAATEKPAAAPVPTKAPEVDAVALAR 71

Query: 69  SIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128
           + A+ A  L+ L S +++F  C L   + S +         +MIIG  P   ++ +G+PF
Sbjct: 72  TAAETAGDLNALSSAMQAFEHCELKKGARSFVFCDGNPAARVMIIGEAPGREEDRAGRPF 131

Query: 129 SGKTGNMLDKMLQSIEIMR------TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQI 182
            G+ G +LD+ML++I++ R        ++I+ + PW PP NR     E+ +  P + R +
Sbjct: 132 VGRAGQLLDRMLEAIQMGRAADDAARSVYITNVLPWRPPSNRTPDKDEIAMMLPFLERHV 191

Query: 183 ELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL 242
            L  P+I++ +GN               +  G W ++       P L   HP  L++ P+
Sbjct: 192 ALADPEIVVLMGNTPCQALLGRTG--ITRMRGNWVDVLGK----PCLPMFHPAYLLRNPI 245

Query: 243 IKKNTWHALITLKKALK 259
            K+  W  L+ L   L+
Sbjct: 246 AKREAWADLLDLNARLR 262


>gi|213018713|ref|ZP_03334521.1| putative DNA glycosylase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|212995664|gb|EEB56304.1| putative DNA glycosylase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 211

 Score =  209 bits (532), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 61/203 (30%), Positives = 111/203 (54%), Gaps = 3/203 (1%)

Query: 60  HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSD 119
            S  + +A  +A +  S+ EL+S ++SF  C +  T+ +T+ +       +M++G  P  
Sbjct: 3   PSDWIIEARKLASECGSVDELRSAVKSFEGCEIKKTATNTVFSDGNPNAKIMLVGEAPGA 62

Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIM 179
           ++++ G PF G +G +LDKML +I + RT+++IS    W PPGNR  +++E+++CRP + 
Sbjct: 63  NEDLKGIPFCGASGMLLDKMLGAINLDRTKVYISNTVFWRPPGNRKPTDLELDMCRPFVE 122

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATVHPQEL 237
           + I L+ P+IL+F+G        + + +      GK+      +    I T A  HP  L
Sbjct: 123 KHIALVLPQILIFVGGIACYSLLD-NTKTISNLRGKFHTYTNQYLSHAITTAAIFHPAYL 181

Query: 238 IQYPLIKKNTWHALITLKKALKN 260
           ++ P  K+  W  L  +++ L N
Sbjct: 182 LRQPAQKRLAWEDLKKIREYLDN 204


>gi|116251217|ref|YP_767055.1| uracil-DNA glycosylase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115255865|emb|CAK06946.1| putative uracil-DNA glycosylase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 299

 Score =  209 bits (531), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 93/295 (31%), Positives = 142/295 (48%), Gaps = 35/295 (11%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEP-NNEATY---------------------- 37
           M S   LS  ++  +  F+AD+GV W+ +E   +                          
Sbjct: 1   MISANDLSPAELAALLHFHADAGVEWLLEEEAIDRFAEFEAMKAARRPAAQAQQQRPAAG 60

Query: 38  -----------ESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRS 86
                       +     +                  VQQA  +A+ A SL ELK+ + S
Sbjct: 61  ERPAPGQAQVRPNAAVRPAPAERAASGPQPAIPDGEAVQQARFVAETARSLVELKTAIES 120

Query: 87  FHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM 146
           F+ C+L  ++ STI A+      +M+IG  PS  D+  G PFSGK+G + DKML +I + 
Sbjct: 121 FNGCNLKHSARSTIFASGDAESGIMVIGSAPSAEDDREGMPFSGKSGQLFDKMLAAIGLT 180

Query: 147 RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206
           R+ I ++ + PW PPGNR  S  EM+ICRP I RQI L  PK +L +GN +  FFF  + 
Sbjct: 181 RSAILLTQVIPWRPPGNRAPSAAEMDICRPFIERQIALAEPKAILLLGNFSARFFFGEND 240

Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
                  G+W  +     +IP +A++HPQ+L+  P+ K+  W+ L+  +  LK+L
Sbjct: 241 TIHG-LRGRWKEIAAADCVIPAIASLHPQDLLTAPVNKRLAWNDLLAFQAKLKSL 294


>gi|254461237|ref|ZP_05074653.1| uracil-DNA glycosylase [Rhodobacterales bacterium HTCC2083]
 gi|206677826|gb|EDZ42313.1| uracil-DNA glycosylase [Rhodobacteraceae bacterium HTCC2083]
          Length = 263

 Score =  209 bits (531), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 65/257 (25%), Positives = 114/257 (44%), Gaps = 11/257 (4%)

Query: 7   LSQEQILTIALFYADSGVYW-VFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLV- 64
           L       +  +  + GV   + + P N    + + K+ +  +A   I       +  V 
Sbjct: 9   LDYHTARALLEWQVEFGVDETMSENPVNRFEVKPEPKKTAPVAAPPKIEAGIAPVADKVD 68

Query: 65  --QQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDN 122
               A  +A  A  +  LK+ L  F  C L   + + + A  T G  +M+IG  PS  ++
Sbjct: 69  GAALARDVAMAAQDIGALKTALEGFEACELKRGARNMVFADGTFGGRVMVIGEAPSRDED 128

Query: 123 ISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQ 181
            SG PF+G TG +LD ML+SI++ R +  +++ + PW  P   ++S  ++ +  P + R 
Sbjct: 129 HSGLPFTGDTGVLLDNMLKSIDLSRAETVYLTNVLPWRLPRGADVSEADLAMMMPFVERH 188

Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241
           + L  P IL+ +GN               +  G+W         +P ++  HP+ L+  P
Sbjct: 189 VALAKPDILVLMGNVACQAVLGKRG--ITRLRGQW----GEAMGLPVISMYHPEFLLNNP 242

Query: 242 LIKKNTWHALITLKKAL 258
             K+  W  L+ LK  L
Sbjct: 243 AKKREAWADLLALKAKL 259


>gi|294675958|ref|YP_003576573.1| uracil-DNA glycosylase [Rhodobacter capsulatus SB 1003]
 gi|294474778|gb|ADE84166.1| uracil-DNA glycosylase [Rhodobacter capsulatus SB 1003]
          Length = 270

 Score =  208 bits (530), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 66/272 (24%), Positives = 117/272 (43%), Gaps = 19/272 (6%)

Query: 3   SKRILSQEQILTIALFYADSGV-YWVFDEPNNEATY-----ESQRKEKSIDSAIQPITNI 56
               +S +  L    +  + G    V D P N               ++   A +P   +
Sbjct: 5   PAPEISYDAALAAFEWLIELGATDPVGDAPVNRYDLVTPEPAPAPPPQAETRAPRPAPVL 64

Query: 57  RHIHS-PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115
             + +   V  A  +A +A +L +L+  +  F  C L   + +T+         +M+IG 
Sbjct: 65  APVETVDPVAVARGLAARAATLDDLREAILGFDHCPLKRGARNTVFCDGNPKARVMLIGE 124

Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI------HISMISPWHPPGNRNLSNI 169
            P   ++  GKPF G+ G +LD+ML ++ + R         +I+ + PW PPGNR     
Sbjct: 125 APGKDEDAQGKPFVGRAGQLLDRMLAAVGLDRAAPDPGTAVYITNVMPWRPPGNREPEPA 184

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E+ +  P + R +EL+ P +++ +GN       N+      +  G W+         P L
Sbjct: 185 EIAMMGPFLARHVELVDPDLIVLMGNTACAAALNSRG--ITRLRGSWTQAF----GRPAL 238

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
            T+HP  L++ P+ K+  W  L+ L+  L  L
Sbjct: 239 PTLHPANLLRTPINKRLVWADLLELRAKLNAL 270


>gi|86356942|ref|YP_468834.1| DNA polymerase bacteriophage-type (uracil-DNA glycosylase) protein
           [Rhizobium etli CFN 42]
 gi|86281044|gb|ABC90107.1| probable DNA polymerase bacteriophage-type (uracil-DNA glycosylase)
           protein [Rhizobium etli CFN 42]
          Length = 297

 Score =  208 bits (530), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 92/293 (31%), Positives = 143/293 (48%), Gaps = 33/293 (11%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEP-NNEATYESQ------------RKEKSID 47
           M S   LS  ++  +  F+AD+GV W+ +E   +                   ++    +
Sbjct: 1   MISVNDLSPAELAALLHFHADAGVEWLQEEEAVDRFAEFEAMKAARRPAAQAQQERPIAE 60

Query: 48  SAIQPITN-------------------IRHIHSPLVQQADSIAQKACSLHELKSLLRSFH 88
               P                              VQQA  +A+ A SL ELK+ + +F+
Sbjct: 61  ERPLPGQRQTSPRPSAAARPAPASGPQPAIPDGEAVQQARFVAEAARSLSELKTAIEAFN 120

Query: 89  DCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRT 148
            C+L  ++ STI A+      +M+IG  PS  D+  G PFSGK+G + DKML +I + R+
Sbjct: 121 GCNLKHSARSTIFASGDADSGIMMIGSAPSAEDDREGTPFSGKSGQLFDKMLAAIGLSRS 180

Query: 149 QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQK 208
            + ++ + PW PPGNR  S  EM+ICRP I RQI L  P+ +L +GN    FFF  +   
Sbjct: 181 SVLLTQVIPWRPPGNRAASPAEMDICRPFIERQIALAEPQAILLLGNFAARFFFGENDTI 240

Query: 209 TYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
                G+W  +     IIPT+A++HPQ+L+  P+ K+  W+ L+  +  L +L
Sbjct: 241 HG-LRGRWREIAVAGRIIPTIASLHPQDLLTAPVNKRLAWNDLLVFQAKLNSL 292


>gi|312114358|ref|YP_004011954.1| phage SPO1 DNA polymerase-related protein [Rhodomicrobium vannielii
           ATCC 17100]
 gi|311219487|gb|ADP70855.1| phage SPO1 DNA polymerase-related protein [Rhodomicrobium vannielii
           ATCC 17100]
          Length = 289

 Score =  208 bits (529), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 77/271 (28%), Positives = 125/271 (46%), Gaps = 26/271 (9%)

Query: 15  IALFYADSGVYWVFDEPNNEATYESQRKEKSID------------------------SAI 50
           +  +Y   GV     +   +   E  R E+ +                         +A 
Sbjct: 17  LLEWYRAMGVDETIADETRDWLSEIPRAEQPLPKGIDVDANVNRKPLTRERADLTHLAAP 76

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
                +    S  V  A  +A+ A SL EL++LL SF  C L +T+     +  +    L
Sbjct: 77  TRAAPVELPASNDVMAARELARSAKSLEELRALLESFEGCGLKATASRLCLSRGSPSAPL 136

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170
           M+IG  P   ++  G+PF G+ G +LD+ML +I +     +I+ I  W PPGNR  S  E
Sbjct: 137 MLIGEAPGKDEDRLGQPFVGRAGQLLDRMLAAIGLTEADFYITNIVFWRPPGNRTPSPEE 196

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230
           + +C+P + RQIEL++P+I++F+GN               +  GKW  L   H  +  +A
Sbjct: 197 VLVCQPFVERQIELLAPRIVVFLGNAAARQLTGATEGIM-KLRGKWLELP-GHPGVRAMA 254

Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALKNL 261
           T+HP  L++ P+ K+  W  L+ ++ AL  L
Sbjct: 255 TLHPAYLLRTPIAKRLAWRDLLAVRAALDAL 285


>gi|58697041|ref|ZP_00372503.1| putative phage DNA polymerase [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|58536691|gb|EAL59977.1| putative phage DNA polymerase [Wolbachia endosymbiont of Drosophila
           simulans]
          Length = 249

 Score =  208 bits (528), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 60/203 (29%), Positives = 110/203 (54%), Gaps = 3/203 (1%)

Query: 60  HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSD 119
            S  + +A  +A K  S+ EL+S ++SF  C +  T+ +T+ +       +M++G  P  
Sbjct: 41  PSDWIIEARKLAGKCGSVDELRSAVKSFEGCEIKKTATNTVFSDGNPNAKIMLVGEAPGA 100

Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIM 179
           ++++ G PF G +G +LDKML +I + RT+++IS    W PPGNR  +++E+++CRP + 
Sbjct: 101 NEDLQGIPFCGASGMLLDKMLNAINLDRTKVYISNTVFWRPPGNRKPTDLELDMCRPFVE 160

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATVHPQEL 237
           + I L+SP+IL+ +G        ++         G++      +  + I T A  HP  L
Sbjct: 161 KHIALVSPQILILVGGIACYSLLDSTK-TISNLRGRFHTYTNQYLSNSITTAAIFHPAYL 219

Query: 238 IQYPLIKKNTWHALITLKKALKN 260
           ++ P  K+  W     +++ L N
Sbjct: 220 LRQPAQKRLAWEDSKKIREYLDN 242


>gi|15964784|ref|NP_385137.1| hypothetical protein SMc02375 [Sinorhizobium meliloti 1021]
 gi|307309672|ref|ZP_07589324.1| phage SPO1 DNA polymerase-related protein [Sinorhizobium meliloti
           BL225C]
 gi|15073962|emb|CAC45603.1| Putative DNA polymerase bacteriophage-type [Sinorhizobium meliloti
           1021]
 gi|306899884|gb|EFN30507.1| phage SPO1 DNA polymerase-related protein [Sinorhizobium meliloti
           BL225C]
          Length = 286

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 91/287 (31%), Positives = 140/287 (48%), Gaps = 31/287 (10%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDE-PNNEATYESQRKEKSIDSAIQPITNIRH- 58
           M S   LS+ ++  +  F+A++GV W+ +E P +        K +   S   P T     
Sbjct: 1   MISANDLSRSELAALLAFHAEAGVEWLLEEEPVDRLAEFEAMKSRRAQSRAVPQTGATAA 60

Query: 59  ---------------------------IHSPLVQQADSIAQKACSLHELKSLLRSFHDCH 91
                                           +++A  +A  A SL EL++ + +F  C+
Sbjct: 61  EPQQSAPPAAARERRPAPPAPPPVVAIPDEQAIKEAQFVADAARSLGELRTAMEAFAGCN 120

Query: 92  LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH 151
           L +++ + + A  +    +MIIG  P   D+  G+PF+G+ G ML++ML  I + R  + 
Sbjct: 121 LRNSARNLVFAEGSAASGVMIIGPMPYADDDRDGRPFAGRHGEMLERMLSGIGLSREDVL 180

Query: 152 ISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQ 211
           ++   PW PPGNR  S  E +ICRP I RQI L  PK LL +GN T  FFF    +  +Q
Sbjct: 181 LANAVPWRPPGNRVPSAREADICRPFIERQIALAEPKQLLLLGNFTARFFFG--GETIHQ 238

Query: 212 NLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
             G+W  L    + IPTLAT+HPQ+L+  P+ K+  W  L+  K  L
Sbjct: 239 LRGEWRELTFGGTSIPTLATLHPQDLVAAPINKRFAWLDLLAFKSRL 285


>gi|84684257|ref|ZP_01012159.1| hypothetical protein 1099457000262_RB2654_17451 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84668010|gb|EAQ14478.1| hypothetical protein RB2654_17451 [Rhodobacterales bacterium
           HTCC2654]
          Length = 264

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 63/268 (23%), Positives = 111/268 (41%), Gaps = 16/268 (5%)

Query: 3   SKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIR---H 58
            +  L   Q   +  +Y + GV   V + P +    + +        A  P         
Sbjct: 1   MESALDWHQAKALLEWYVELGVTDAVAEAPIDRYELKPEPPRTPAAPAPVPEGPTPLREV 60

Query: 59  IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPS 118
             +  V  A   A  A SL  L   ++++    L   + S + +       +MI+G  P 
Sbjct: 61  PRTDWVAVAKEHAAGAGSLEALAEAMQAYDGSPLKKGARSFVFSDGNPAARVMIVGEGPG 120

Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI------HISMISPWHPPGNRNLSNIEME 172
             ++  GKPF G  G +LD+M  +I + R         +I+ + P+ PPGNRN +  E+ 
Sbjct: 121 AEEDREGKPFVGPAGRLLDQMFAAIGLNRATPDAQNALYITNVVPYRPPGNRNPTPEEIA 180

Query: 173 ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATV 232
           +  P ++R IEL  P I++ +GN       +       +  G W+ +       P L   
Sbjct: 181 MFTPFLLRHIELADPDIIIPMGNIALTALLDRQG--ITKLRGTWTEVLGK----PALPMF 234

Query: 233 HPQELIQYPLIKKNTWHALITLKKALKN 260
           HP  L++ P+ K+  W  L+ ++  L+ 
Sbjct: 235 HPSYLLRNPISKREAWADLLDIQAKLRA 262


>gi|241203823|ref|YP_002974919.1| phage SPO1 DNA polymerase-related protein [Rhizobium leguminosarum
           bv. trifolii WSM1325]
 gi|240857713|gb|ACS55380.1| phage SPO1 DNA polymerase-related protein [Rhizobium leguminosarum
           bv. trifolii WSM1325]
          Length = 299

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 94/295 (31%), Positives = 143/295 (48%), Gaps = 35/295 (11%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEP-NNEATYESQRK----------------- 42
           M S   LS  ++  +  F+AD+GV W+ +E   +        K                 
Sbjct: 1   MISANDLSPAELAALLHFHADAGVEWLLEEEAIDRFAEFEAMKAARRPAAQAQQQRPAAG 60

Query: 43  EKSIDSAI----------------QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRS 86
           E+                                   VQQA  +A+ A SL ELK+ + +
Sbjct: 61  ERPAPGQSPARPNAAARPAPAERAASGPQPAIPDGEAVQQARFVAETARSLVELKTAIET 120

Query: 87  FHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM 146
           F+ C+L  ++ STI A+      +M+IG  PS  D+  G PFSGK+G + DKML +I + 
Sbjct: 121 FNGCNLKHSARSTIFASGDTESGIMVIGSAPSAEDDREGLPFSGKSGQLFDKMLAAIGLT 180

Query: 147 RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206
           R+ I ++ + PW PPGNR  S  EM+ICRP I RQI L  PK +L +GN +  FFF  + 
Sbjct: 181 RSTILLTQVIPWRPPGNRAPSAAEMDICRPFIERQIALAEPKAILLLGNFSARFFFGEND 240

Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
                  G+W  +     +IP +A++HPQ+L+  P+ K+  W+ L+  +  LK+L
Sbjct: 241 TIHG-LRGRWKEIAAADCVIPAIASLHPQDLLTAPVNKRLAWNDLLAFQAKLKSL 294


>gi|260575952|ref|ZP_05843947.1| phage SPO1 DNA polymerase-related protein [Rhodobacter sp. SW2]
 gi|259021878|gb|EEW25179.1| phage SPO1 DNA polymerase-related protein [Rhodobacter sp. SW2]
          Length = 262

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 63/260 (24%), Positives = 120/260 (46%), Gaps = 17/260 (6%)

Query: 7   LSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQ 65
           +  +  L    +  D G    + D P N         +    + +Q    +   ++  V 
Sbjct: 10  MDGQVALAALAWQVDLGATEAIGDAPVNRYEM----PDAVAVAKVQSAPVVAAPYADPVA 65

Query: 66  QADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISG 125
            A + A  A +L EL++ + +F  C L   + +T+ A       +M+IG  P   ++  G
Sbjct: 66  VARAAAAGAGTLAELRAAMEAFDLCDLKRGARNTVFADGNPNARVMLIGEAPGRDEDAEG 125

Query: 126 KPFSGKTGNMLDKMLQSIEIMRTQI------HISMISPWHPPGNRNLSNIEMEICRPIIM 179
           +PF G+ G +LD+ML +I + R         +I+ + PW PP NR+ +  E+ + +P + 
Sbjct: 126 RPFVGRAGQLLDRMLAAIGLSRQSPDPAAAVYITNVLPWRPPQNRDPAPDEIAMMQPFLA 185

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
           R +EL +P++++ +GN +             +  G+W+         P L  +HP  L++
Sbjct: 186 RHVELAAPELIVLMGNISCQAVLGQRG--ITRLRGQWTEAF----GHPALPMLHPAYLLR 239

Query: 240 YPLIKKNTWHALITLKKALK 259
            P  K+++W  L+ LK  L+
Sbjct: 240 TPAAKRDSWADLLALKARLR 259


>gi|307319469|ref|ZP_07598896.1| phage SPO1 DNA polymerase-related protein [Sinorhizobium meliloti
           AK83]
 gi|306894841|gb|EFN25600.1| phage SPO1 DNA polymerase-related protein [Sinorhizobium meliloti
           AK83]
          Length = 286

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 91/287 (31%), Positives = 140/287 (48%), Gaps = 31/287 (10%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDE-PNNEATYESQRKEKSIDSAIQPITNIRH- 58
           M S   LS+ ++  +  F+A++GV W+ +E P +        K +   S   P T     
Sbjct: 1   MISANDLSRSELAALLAFHAEAGVEWLLEEEPVDRLAEFEAMKSRRAQSRAVPQTGATAA 60

Query: 59  ---------------------------IHSPLVQQADSIAQKACSLHELKSLLRSFHDCH 91
                                           +++A  +A  A SL EL++ + +F  C+
Sbjct: 61  EPQQSAPPAAARERRPAPPAPPPVVAIPDEQAIKEAQFVADAARSLGELRTAMEAFAGCN 120

Query: 92  LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH 151
           L +++ + + A  +    +MIIG  P   D+  G+PF+G+ G ML++ML  I + R  + 
Sbjct: 121 LRNSARNLVFAEGSAAPGVMIIGPMPYADDDRDGRPFAGRHGEMLERMLSGIGLSREDVL 180

Query: 152 ISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQ 211
           ++   PW PPGNR  S  E +ICRP I RQI L  PK LL +GN T  FFF    +  +Q
Sbjct: 181 LANAVPWRPPGNRVPSAREADICRPFIERQIALAEPKQLLLLGNFTARFFFG--GETIHQ 238

Query: 212 NLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
             G+W  L    + IPTLAT+HPQ+L+  P+ K+  W  L+  K  L
Sbjct: 239 LRGEWRELTFGGTSIPTLATLHPQDLVAAPINKRFAWLDLLAFKSRL 285


>gi|88608041|ref|YP_506799.1| uracil-DNA glycosylase [Neorickettsia sennetsu str. Miyayama]
 gi|88600210|gb|ABD45678.1| uracil-DNA glycosylase, family 4 [Neorickettsia sennetsu str.
           Miyayama]
          Length = 255

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 19/260 (7%)

Query: 8   SQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQA 67
           S+   L I  FY   G+  +           +     +  S  Q       +       A
Sbjct: 3   SKSSYLMILKFYDRLGMDTM----------TADISSPNQASITQVGGMPIDMKESAESTA 52

Query: 68  DSIAQKACSLH------ELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121
                    L       ELK+L+ +F  C L  ++ +T+         +M+IG  P + +
Sbjct: 53  RKHKTPERDLTYVTTLGELKALVYNFEGCQLKKSAKNTVFCDGNPDAKIMLIGEAPGEQE 112

Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ 181
           +  G PF G++GN+LDKMLQ+I + RT+++I+    W PPGNR  +  E+EIC+P +   
Sbjct: 113 DKLGIPFCGRSGNLLDKMLQAIGLDRTKVYITNAVFWRPPGNRRPTPEEIEICKPFLEHH 172

Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATVHPQELIQ 239
           I L+ PK+++ +G+   +        +      K      P     I T    HP  L++
Sbjct: 173 IRLVLPKLIVLLGSTAASSVLK-SQDRISTLRNKLHEYKNPFIREGITTTVMFHPSYLLR 231

Query: 240 YPLIKKNTWHALITLKKALK 259
            P  KK  W  L  ++  + 
Sbjct: 232 QPAQKKLAWEDLKLIRSYID 251


>gi|260429553|ref|ZP_05783530.1| uracil-DNA glycosylase [Citreicella sp. SE45]
 gi|260420176|gb|EEX13429.1| uracil-DNA glycosylase [Citreicella sp. SE45]
          Length = 263

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 56/268 (20%), Positives = 112/268 (41%), Gaps = 15/268 (5%)

Query: 3   SKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSA-------IQPIT 54
               +          +  + G      + P +   +E + +     SA         P  
Sbjct: 1   MDSGMDWHWARAALDWQIELGADEAIGETPVDRFAHEVEAQAARAVSAAPAGGRGATPPI 60

Query: 55  NIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIG 114
            +       V  A   A  A +L EL++ + ++  C L   + + + +       +MI+G
Sbjct: 61  PVADAGPDPVVVAQEAAAAASTLDELRAAIGAYEHCALKRGARNLVFSDGAPDARVMIVG 120

Query: 115 YTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEI 173
             P   +++ G+PF G+ G +LD+ML  + + R   ++I+ + PW PP NR+    E+ +
Sbjct: 121 EAPGRDEDLQGRPFVGRAGQLLDRMLAPLGLSRAENVYITNVLPWRPPQNRDPRPDEIAM 180

Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
            +P + R I L+ P +L+ +GN + +           +  G W+         P +   H
Sbjct: 181 MKPFLARHIALVDPDLLVIMGNISCDALLGRRG--ITRLRGNWAEAE----GRPAMPMFH 234

Query: 234 PQELIQYPLIKKNTWHALITLKKALKNL 261
           P  L++ P +K+  W  ++ +   L+ L
Sbjct: 235 PAYLLRQPQMKREAWADMLAIGAKLRAL 262


>gi|170750469|ref|YP_001756729.1| phage SPO1 DNA polymerase-related protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170656991|gb|ACB26046.1| phage SPO1 DNA polymerase-related protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 295

 Score =  206 bits (523), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 71/293 (24%), Positives = 125/293 (42%), Gaps = 36/293 (12%)

Query: 2   TSKRILSQEQILTIALFYADSGVYWVFDE-PNNEATYESQRKE----------KSIDSAI 50
                 +Q  ++    F+ ++G     DE P++  +                 ++ +  +
Sbjct: 1   MPSSTDAQADLIAYLDFHVEAGADAALDEHPHDRFSEADAPAPTLRAPRRAAPRAAEQPV 60

Query: 51  QPITN------------------------IRHIHSPLVQQADSIAQKACSLHELKSLLRS 86
            P+ N                                   A + A++A SL EL+ +L  
Sbjct: 61  SPVANTLVPPPGSAPPAPPAAAPRTFGRAASAQPDEAASDARARARQAKSLDELERILAD 120

Query: 87  FHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM 146
           F  C L  T+ + + A       +M +G  P   ++  GKPF G++G +LDKM++++ + 
Sbjct: 121 FDACPLRFTAKNLVFADGNPEARVMFLGEAPGADEDRIGKPFMGRSGQLLDKMMKAVGLD 180

Query: 147 RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206
           RT  +I  I PW PPGNRN +  E+ +CRP + RQIEL+ P I++ +G            
Sbjct: 181 RTSAYIGNIVPWRPPGNRNPTPQEVAVCRPFVERQIELVDPDIIVCLGAPATQTLTGTK- 239

Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
               +  G+      P+  +  LAT+HP  L++ P+ K+  W    +L+  L 
Sbjct: 240 DGILRTRGRLFPYKLPNREVKLLATLHPAFLLRQPVQKRLAWRDFRSLRALLD 292


>gi|157826560|ref|YP_001495624.1| Uracil-DNA glycosylase [Rickettsia bellii OSU 85-389]
 gi|157801864|gb|ABV78587.1| Uracil-DNA glycosylase [Rickettsia bellii OSU 85-389]
          Length = 263

 Score =  206 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 63/252 (25%), Positives = 121/252 (48%), Gaps = 9/252 (3%)

Query: 17  LFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPIT----NIRHIHSPLVQQADSIA 71
            +    GV Y+  + P      ++ +  +   +   P      N+       +  A S+A
Sbjct: 7   KWLNAIGVEYYCSEHPPKLKVSDNTKLAEKPQAKPTPQKENGFNMNDKTHDNISLARSLA 66

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
            KA ++ ELK  L +F+ C L   + +T+         +M+IG  P  ++++ G PF G+
Sbjct: 67  DKANNIAELKESLLNFNGCDLKKLATNTVFGDGNPAAKIMLIGEAPGSNEDLKGIPFCGE 126

Query: 132 TGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
           +GN+LD ML++I I R    +I+    W PP NR  +  E+++CRP + + I L++PK++
Sbjct: 127 SGNLLDNMLRAIGISRKDNAYITNTVFWRPPANRQPTLEEVDVCRPFVEKHIALVNPKLI 186

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT--LATVHPQELIQYPLIKKNTW 248
           + +G+         +A    +   ++      +   P    A  HP  L++ P  K+ +W
Sbjct: 187 ILVGSTAATSLLGKNA-GITKIRQEYYFYTNKYLAAPIQTTAMFHPAYLLRQPSQKRTSW 245

Query: 249 HALITLKKALKN 260
           + L+ +K  L++
Sbjct: 246 YDLLKIKDYLES 257


>gi|91206062|ref|YP_538417.1| Uracil-DNA glycosylase [Rickettsia bellii RML369-C]
 gi|91069606|gb|ABE05328.1| Uracil-DNA glycosylase [Rickettsia bellii RML369-C]
          Length = 262

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 63/252 (25%), Positives = 121/252 (48%), Gaps = 9/252 (3%)

Query: 17  LFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPIT----NIRHIHSPLVQQADSIA 71
            +    GV Y+  + P      ++ +  +   +   P      N+       +  A S+A
Sbjct: 6   KWLNAIGVEYYCSEHPPKLKVSDNTKLAEKPQAKPTPQKENGFNMNDKTHDNISLARSLA 65

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
            KA ++ ELK  L +F+ C L   + +T+         +M+IG  P  ++++ G PF G+
Sbjct: 66  DKADNIAELKESLLNFNGCDLKKLATNTVFGDGNPAAKIMLIGEAPGSNEDLKGIPFCGE 125

Query: 132 TGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
           +GN+LD ML++I I R    +I+    W PP NR  +  E+++CRP + + I L++PK++
Sbjct: 126 SGNLLDNMLRAIGISRKDNAYITNTVFWRPPANRQPTLEEVDVCRPFVEKHIALVNPKLI 185

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT--LATVHPQELIQYPLIKKNTW 248
           + +G+         +A    +   ++      +   P    A  HP  L++ P  K+ +W
Sbjct: 186 ILVGSTAATSLLGKNA-GITKIRQEYYFYTNKYLAAPIQTTAMFHPAYLLRQPSQKRTSW 244

Query: 249 HALITLKKALKN 260
           + L+ +K  L++
Sbjct: 245 YDLLKIKDYLES 256


>gi|222056605|ref|YP_002538967.1| phage SPO1 DNA polymerase-related protein [Geobacter sp. FRC-32]
 gi|221565894|gb|ACM21866.1| phage SPO1 DNA polymerase-related protein [Geobacter sp. FRC-32]
          Length = 256

 Score =  205 bits (521), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 103/251 (41%), Gaps = 12/251 (4%)

Query: 10  EQILTIALFYADSGVYWV-FDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQAD 68
             +        +SG+  + + E      + +     +   A              V    
Sbjct: 12  ASLCVYLEDLQESGIDGLAYGESAPAVDHGNDYHSATSPPASVEPAPAEGSPPDPVSAEK 71

Query: 69  SIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128
                  +L +++  L +   C L  T  + +         L+ +G  P   +++ G+PF
Sbjct: 72  E------TLDKVRLDLGNCTRCGLSGTRTNLVFGIGNPAARLVFVGEAPGRDEDLQGEPF 125

Query: 129 SGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188
            G+ G +L K++ +++  R+ ++I  I    PPGNRN    E+E C+P ++RQ+  ++P+
Sbjct: 126 VGEAGQLLTKIIGAMQFKRSDVYICNILKCRPPGNRNPQQEEIEQCQPFLLRQLHAVNPE 185

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW 248
            ++ +G            +   +  G++ +       IP + T HP  L++ P +K+  W
Sbjct: 186 AIVCLGTFAAQTLLQTK-EPISKLRGRFHDY----HGIPLMPTFHPAFLLRNPAMKREVW 240

Query: 249 HALITLKKALK 259
             +  + + L 
Sbjct: 241 EDMQKVMRLLD 251


>gi|300024378|ref|YP_003756989.1| phage SPO1 DNA polymerase-related protein [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299526199|gb|ADJ24668.1| phage SPO1 DNA polymerase-related protein [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 275

 Score =  203 bits (515), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 78/276 (28%), Positives = 118/276 (42%), Gaps = 30/276 (10%)

Query: 12  ILTIALFYADSGVYWVFDEPNNEATYESQRKE------KSIDSAIQPITNIRHIHSPLVQ 65
           +L +  ++   G     DE + +                  D A   +          V 
Sbjct: 1   MLALLDWFQAMGADAAVDETSCDWLARGPTPPGAAFAWPRPDDAPARVPPESAPSRRPVS 60

Query: 66  Q-----------------------ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICA 102
           Q                       A  IA++A SL  L++ L+ F  C L +T+      
Sbjct: 61  QNPTADVTRPRAATPLGASEAETGARRIAREAQSLEALEAALKGFDGCGLKATATKLCFY 120

Query: 103 TQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG 162
                 DLMI+G  P   +++ GKPF G+ G +LDKML +I +  + +HI+ I  W PPG
Sbjct: 121 RGAPAADLMIVGEAPGRDEDLEGKPFVGRAGRLLDKMLAAIGLSESDVHITNIVYWRPPG 180

Query: 163 NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP 222
           NR  +  E   CRP + RQIEL++PKI++ +G       F   A+   +  GKW  L   
Sbjct: 181 NRTPTPQEALACRPFLERQIELVAPKIVVAVGGSAAKELFGV-AEGIMRLRGKWRELTVG 239

Query: 223 HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
              I  LAT+HP  L++ P  K   W  L+ ++  L
Sbjct: 240 DRKIQALATLHPAYLLRTPAAKNLAWLDLLQIRSKL 275


>gi|86139051|ref|ZP_01057622.1| uracil-DNA glycosylase [Roseobacter sp. MED193]
 gi|85824282|gb|EAQ44486.1| uracil-DNA glycosylase [Roseobacter sp. MED193]
          Length = 266

 Score =  203 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 62/268 (23%), Positives = 109/268 (40%), Gaps = 18/268 (6%)

Query: 3   SKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRH--- 58
            +  +       +  +  + G    + +EP N     +   +             +    
Sbjct: 1   MESAIDYWSAKALLEWQVELGATEALCEEPVNRYELAAPAPKGRQGQQAGQQPGQKPGMP 60

Query: 59  -------IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLM 111
                       V +A   A  A  L  L++ +  +  C L   + + + A    G  +M
Sbjct: 61  PPVAPKPKPVDPVAEARKAAAAAAELPSLRAAMAEYRHCDLKMGARNLVFADGQPGARVM 120

Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIE 170
           +IG  P   ++  GKPF G  G +LD+MLQ+I++ R +  +I+ + PW P  NR+ S  E
Sbjct: 121 VIGEAPGRDEDQQGKPFVGAAGQLLDRMLQAIDLGRDKNVYITNVLPWRPQQNRDPSPEE 180

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230
           +++  P + R +EL  P+IL+ +GN +             +  G W+         P L 
Sbjct: 181 IDMMLPFLERHVELAQPEILVLMGNISCQAVLGKRG--ITRLRGTWAEAWGK----PVLP 234

Query: 231 TVHPQELIQYPLIKKNTWHALITLKKAL 258
             HP  L++ P  K+  W  L+ LK  L
Sbjct: 235 MFHPAYLLRQPDQKRAAWADLLELKARL 262


>gi|67459732|ref|YP_247356.1| uracil-DNA glycosylase [Rickettsia felis URRWXCal2]
 gi|67005265|gb|AAY62191.1| Uracil-DNA glycosylase, family 4 [Rickettsia felis URRWXCal2]
          Length = 262

 Score =  202 bits (514), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 66/253 (26%), Positives = 122/253 (48%), Gaps = 9/253 (3%)

Query: 16  ALFYADSGV-YWVFDEPNNEA----TYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSI 70
             + +  GV Y+  + P        T  +++ +  + S  +   N+       +  A S+
Sbjct: 5   LKWLSAIGVEYYCLEHPPKLKVCNNTELTEKPQVKLMSTKETAFNMNDKVHDNITLARSL 64

Query: 71  AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130
           A KA ++ ELK  L +F+ C L   + +T+         +M+IG  P  ++++ G PF G
Sbjct: 65  ADKANNIEELKESLLNFNGCELKKFATNTVFGDGNLEAKIMLIGEAPGSTEDLKGIPFCG 124

Query: 131 KTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189
           ++GN+LD ML +I I R    +I+    W PP NR  +  E++ICRP + + I LI+PK+
Sbjct: 125 ESGNLLDNMLYAIGISRKNNAYITNTVFWRPPANRQPTLEEVDICRPFVEKHIALINPKL 184

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT--LATVHPQELIQYPLIKKNT 247
           ++ +G+               +   ++      +   P    A  HP  L++ P+ K+ +
Sbjct: 185 IILVGSTAATSLLG-KNSGITKIRQEYYFYTNKYLSAPIQTTAIFHPAYLLRQPMQKRTS 243

Query: 248 WHALITLKKALKN 260
           W+ L+ +K+ L N
Sbjct: 244 WYDLLKIKEYLVN 256


>gi|23014826|ref|ZP_00054624.1| COG1573: Uracil-DNA glycosylase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 279

 Score =  201 bits (512), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 70/266 (26%), Positives = 111/266 (41%), Gaps = 20/266 (7%)

Query: 14  TIALFYADSGVYW-VFDEPNNEATYES----------------QRKEKSIDSAIQPITNI 56
            I  +Y ++GV   + +EP +                       R        +   T  
Sbjct: 12  DILRWYLEAGVDESMGEEPVDRYATSRRAVESRAAAAAPAVAPPRHSPRQAEPMAAPTGA 71

Query: 57  RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYT 116
               S L   A  +A     L  L+  +  F    L   + ST+         +M IG  
Sbjct: 72  SLSASALPGTAAHLAASCADLQALRHAMEGFEGLPLKQAASSTVFGDGNPEASVMCIGEA 131

Query: 117 PSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP 176
           P   ++  G PF G +G +LD+ML SI + RT  +I+ + PW PP NR  +  E+ +C P
Sbjct: 132 PGQEEDRRGLPFVGPSGKLLDRMLASIGLDRTSCYITNVVPWRPPANRKPTPDEVAVCMP 191

Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATVHP 234
            + R IEL+ P++L+ +G           A    +  G+W    +P     IP LAT HP
Sbjct: 192 FLTRHIELVDPQVLILLGGAAAAAV-LAKADGINRLRGQWFEFNSPGLPRPIPALATFHP 250

Query: 235 QELIQYPLIKKNTWHALITLKKALKN 260
             L++ P  K++ W  L+ + K L +
Sbjct: 251 AYLLRTPDAKRDAWRDLLMIAKKLAS 276


>gi|114762038|ref|ZP_01441506.1| uracil-DNA glycosylase [Pelagibaca bermudensis HTCC2601]
 gi|114545062|gb|EAU48065.1| uracil-DNA glycosylase [Roseovarius sp. HTCC2601]
          Length = 264

 Score =  201 bits (512), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 61/268 (22%), Positives = 112/268 (41%), Gaps = 16/268 (5%)

Query: 3   SKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAI--------QPI 53
               L          +  + G      D   +    E + +     +A+           
Sbjct: 1   MDSGLDWHYARAALEWQLELGADEAIGDTAVDRFAAEIELQAAREAAAVAQAPARGGAMP 60

Query: 54  TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113
                     V  A   A  A +L +L+  + +F  C L   + + + +       +MI+
Sbjct: 61  PPKIDEGPDPVAVAQQAAAAAATLDDLREAMAAFEHCELRRGARNLVFSDGVAQARVMIV 120

Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEME 172
           G  P   +++ GKPF G+ G +LD+ML +I + R   ++I+ + PW PP NR+    E+ 
Sbjct: 121 GEAPGRDEDLQGKPFVGRAGQLLDRMLGAIGLSRAENVYITNVLPWRPPQNRDPKPDEIA 180

Query: 173 ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATV 232
           +  P + R I L++P++L+ +GN + +           +  GKW+        +P L   
Sbjct: 181 MLTPFLARHIALVAPEVLVVMGNISCDALLGRRG--ITRLRGKWAEAQ----GLPALPMF 234

Query: 233 HPQELIQYPLIKKNTWHALITLKKALKN 260
           HP  L++ P +K+  W  L+ LK  L+ 
Sbjct: 235 HPAYLLRQPQMKREAWADLLELKAKLRA 262


>gi|332559474|ref|ZP_08413796.1| Phage SPO1 DNA polymerase-related protein [Rhodobacter sphaeroides
           WS8N]
 gi|332277186|gb|EGJ22501.1| Phage SPO1 DNA polymerase-related protein [Rhodobacter sphaeroides
           WS8N]
          Length = 259

 Score =  201 bits (512), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 59/250 (23%), Positives = 108/250 (43%), Gaps = 14/250 (5%)

Query: 18  FYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRH-IHSPLVQQADSIAQKAC 75
           +  D G    + D P N       +      +A+     +     +  V++A   A  A 
Sbjct: 15  WQVDLGATEAILDAPVNRYELGDAQPVPKAAAAVAATAALDPVAAADPVEEARRAAAAAP 74

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           +L  L+  + ++  C L   + +T+ +       LM+IG  P   ++ +G+PF G+ G +
Sbjct: 75  TLEALREAMAAYDHCDLKRGARNTVFSDGHPAARLMLIGEAPGREEDAAGRPFVGRAGQL 134

Query: 136 LDKMLQSIEIMRTQI------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189
           LD+M  +I + RT        +I+ + PW PP NR+ S  E+ +  P + R +EL +P +
Sbjct: 135 LDRMFAAIGLSRTSPDAETALYITNVMPWRPPQNRDPSPEEVAMMTPFLARHVELAAPDL 194

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249
           ++  GN               +  G+W+         P +   HP  L++ P  K+  W 
Sbjct: 195 IVVTGNTACAALLGRTG--ITRLRGRWAEAW----GRPVMPMCHPAYLLRNPEAKREAWA 248

Query: 250 ALITLKKALK 259
            L+ +K  L 
Sbjct: 249 DLLEVKARLA 258


>gi|221640492|ref|YP_002526754.1| Phage SPO1 DNA polymerase-related protein [Rhodobacter sphaeroides
           KD131]
 gi|221161273|gb|ACM02253.1| Phage SPO1 DNA polymerase-related protein [Rhodobacter sphaeroides
           KD131]
          Length = 260

 Score =  201 bits (512), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 60/251 (23%), Positives = 107/251 (42%), Gaps = 15/251 (5%)

Query: 18  FYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHI--HSPLVQQADSIAQKA 74
           +  D G    + D P N       +      +A    T        +  V++A   A  A
Sbjct: 15  WQVDLGATEAILDAPVNRYELGDAQPVPKAAAAAVAATAALDPVAAADPVEEARRAAAAA 74

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            +L  L+  + ++  C L   + +T+ +       LM+IG  P   ++ +G+PF G+ G 
Sbjct: 75  PTLEALREAMAAYDHCDLKRGARNTVFSDGHPAARLMLIGEAPGREEDAAGRPFVGRAGQ 134

Query: 135 MLDKMLQSIEIMRTQI------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188
           +LD+M  +I + RT        +I+ + PW PP NR+ S  E+ +  P + R +EL +P 
Sbjct: 135 LLDRMFAAIGLSRTSPDAETALYITNVMPWRPPQNRDPSPEEVAMMTPFLARHVELAAPD 194

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW 248
           +++  GN               +  G+W+         P +   HP  L++ P  K+  W
Sbjct: 195 LIVVTGNTACAALLGRTG--ITRLRGRWAEAW----GRPVMPMCHPAYLLRNPEAKREAW 248

Query: 249 HALITLKKALK 259
             L+ +K  L 
Sbjct: 249 ADLLEVKARLA 259


>gi|126463421|ref|YP_001044535.1| phage SPO1 DNA polymerase-related protein [Rhodobacter sphaeroides
           ATCC 17029]
 gi|126105085|gb|ABN77763.1| phage SPO1 DNA polymerase-related protein [Rhodobacter sphaeroides
           ATCC 17029]
          Length = 260

 Score =  201 bits (511), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 60/251 (23%), Positives = 108/251 (43%), Gaps = 15/251 (5%)

Query: 18  FYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHI--HSPLVQQADSIAQKA 74
           +  D G    + D P N       +      +A    T        +  V++A   A  A
Sbjct: 15  WQVDLGATEAILDAPVNRYELGDAQPVPKAAAAAVAATAALDPVAAADPVEEARRAAAAA 74

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            +L  L+  + ++  C L   + +T+ +       LM+IG  P   ++ +G+PF G+ G 
Sbjct: 75  PTLEALREAMAAYDHCDLKRGARNTVFSDGHPAARLMLIGEAPGREEDAAGRPFVGRAGQ 134

Query: 135 MLDKMLQSIEIMRTQ------IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188
           +LD+M  +I + RT       ++I+ + PW PP NR+ S  E+ +  P + R +EL +P 
Sbjct: 135 LLDRMFAAIGLSRTSLDAETALYITNVMPWRPPQNRDPSPEEVAMMTPFLARHVELAAPD 194

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW 248
           +++  GN               +  G+W+         P +   HP  L++ P  K+  W
Sbjct: 195 LIVVTGNTACAALLGRTG--ITRLRGRWAEAW----GRPVMPMCHPAYLLRNPEAKREAW 248

Query: 249 HALITLKKALK 259
             L+ +K  L 
Sbjct: 249 ADLLEVKARLA 259


>gi|148260066|ref|YP_001234193.1| phage SPO1 DNA polymerase-related protein [Acidiphilium cryptum
           JF-5]
 gi|146401747|gb|ABQ30274.1| phage SPO1 DNA polymerase-related protein [Acidiphilium cryptum
           JF-5]
          Length = 276

 Score =  201 bits (511), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 69/238 (28%), Positives = 105/238 (44%), Gaps = 10/238 (4%)

Query: 21  DSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHEL 80
           + G      E   +    S +   +  +   P T +R   +P        A  A SL EL
Sbjct: 25  EWGADEALLETPPDRAAASPQHRPASPAPAAPGTVVRLPTAPS-------APGAASLAEL 77

Query: 81  KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML 140
           ++ L +F  C L  T+   + A   E   +MIIG  P   ++  G+PF G  G +LDKML
Sbjct: 78  RAALDAFDQCALKRTATQLVFADGAEDARIMIIGEAPGGEEDRIGRPFVGPAGQLLDKML 137

Query: 141 QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF 200
            SI + R  + I  + PW PPGNR  S+ E+  C P + R I L+ P+ L+ +G      
Sbjct: 138 GSIGLDRGTVRIVNVVPWRPPGNRTPSDTEIAQCLPFLHRHIALVRPERLVLLGAVAVRA 197

Query: 201 FFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                     +  GKW  +        +  L T HP  L++ P  K+  W  L+ L++
Sbjct: 198 LIGGK-DGITRLRGKWREVTIEGLDQTLRALPTYHPAYLLRQPAAKRLAWADLLELRR 254


>gi|254419584|ref|ZP_05033308.1| uracil-DNA glycosylase, family 4, putative [Brevundimonas sp. BAL3]
 gi|196185761|gb|EDX80737.1| uracil-DNA glycosylase, family 4, putative [Brevundimonas sp. BAL3]
          Length = 265

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 58/264 (21%), Positives = 109/264 (41%), Gaps = 8/264 (3%)

Query: 2   TSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPI--TNIRH 58
            + +      + ++  F+ D+GV   + D P +          K++  A   +       
Sbjct: 1   MNAQPHDIAAVESLLAFWRDAGVDACYGDAPVDHTHLAPPPALKAVQKATASVVMPLAGP 60

Query: 59  IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS-TSLSTICATQTEGQDLMIIGYTP 117
                + +A  +A  A +L +L + + +F  C L    +  ++         +M+IG  P
Sbjct: 61  SAQDALAEARRLATGASTLQDLAAAVAAFEGCPLRGMGASQSVFGRGNPNAPVMVIGEGP 120

Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177
              ++  G+PF G+ G +LD+ML +  +   ++ I+    W PPGNR  +  E  +C P 
Sbjct: 121 GADEDRLGQPFVGRAGKLLDRMLAAAGLT-DKVFITNTVFWRPPGNRTPTPQEQAVCAPF 179

Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII--PTLATVHPQ 235
           + R   L+ PK +L +G          +     +  G+W         +  P L T+HP 
Sbjct: 180 VERAFALLQPKAVLLLGAAAAKSVLQTEDGIM-KMRGQWREWRLAEGGVSAPALPTLHPA 238

Query: 236 ELIQYPLIKKNTWHALITLKKALK 259
            L++ P  K+  W  L+     L 
Sbjct: 239 FLLRQPQAKRQVWADLLAFAAKLD 262


>gi|15893232|ref|NP_360946.1| N-terminus of bacteriophage-type DNA polymerase [Rickettsia conorii
           str. Malish 7]
 gi|15620449|gb|AAL03847.1| N-terminus of bacteriophage-type DNA polymerase [Rickettsia conorii
           str. Malish 7]
          Length = 279

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 65/253 (25%), Positives = 122/253 (48%), Gaps = 9/253 (3%)

Query: 16  ALFYADSGV-YWVFDEPN----NEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSI 70
             + +  GV Y+  + P        T  +++ +  + S  +   N+       +  A S+
Sbjct: 23  LKWLSAIGVEYYCHEHPPQLKVRNNTELTEKPQVKLMSTKETAFNMNDKVHDNITLARSL 82

Query: 71  AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130
           A KA ++ ELK  L +F+ C L   + +T+         +M+IG  P  ++++ G PF G
Sbjct: 83  ADKANNIEELKESLLNFNGCELKKFATNTVFGDGNLEAKIMLIGEAPGSTEDLKGIPFYG 142

Query: 131 KTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189
           ++GN+LD ML +I I R    +I+    W PP NR  +  E++ICRP + + I LI+P++
Sbjct: 143 ESGNLLDNMLHAIGISRKNNAYITNTVFWRPPANRQPTFEEVDICRPFVEKHIALINPQL 202

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT--LATVHPQELIQYPLIKKNT 247
           ++ +G+               +   ++      +   P    A  HP  L++ P+ K+ +
Sbjct: 203 IILVGSTAATSLLG-KNSGITKIRQEYYFYTNKYLSAPIQTTAIFHPAYLLRQPMQKRTS 261

Query: 248 WHALITLKKALKN 260
           W+ L+ +K+ L N
Sbjct: 262 WYDLLKIKEYLVN 274


>gi|34581100|ref|ZP_00142580.1| N-terminus of bacteriophage-type DNA polymerase [Rickettsia
           sibirica 246]
 gi|238651090|ref|YP_002916948.1| N-terminus of bacteriophage-type DNA polymerase [Rickettsia
           peacockii str. Rustic]
 gi|28262485|gb|EAA25989.1| N-terminus of bacteriophage-type DNA polymerase [Rickettsia
           sibirica 246]
 gi|238625188|gb|ACR47894.1| N-terminus of bacteriophage-type DNA polymerase [Rickettsia
           peacockii str. Rustic]
          Length = 261

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 65/253 (25%), Positives = 122/253 (48%), Gaps = 9/253 (3%)

Query: 16  ALFYADSGV-YWVFDEPN----NEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSI 70
             + +  GV Y+  + P        T  +++ +  + S  +   N+       +  A S+
Sbjct: 5   LKWLSAIGVEYYCHEHPPQLKVRNNTELTEKPQVKLMSTKETAFNMNDKVHDNITLARSL 64

Query: 71  AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130
           A KA ++ ELK  L +F+ C L   + +T+         +M+IG  P  ++++ G PF G
Sbjct: 65  ADKANNIEELKESLLNFNGCELKKFATNTVFGDGNLEAKIMLIGEAPGSTEDLKGIPFYG 124

Query: 131 KTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189
           ++GN+LD ML +I I R    +I+    W PP NR  +  E++ICRP + + I LI+P++
Sbjct: 125 ESGNLLDNMLHAIGISRKNNAYITNTVFWRPPANRQPTFEEVDICRPFVEKHIALINPQL 184

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT--LATVHPQELIQYPLIKKNT 247
           ++ +G+               +   ++      +   P    A  HP  L++ P+ K+ +
Sbjct: 185 IILVGSTAATSLLG-KNSGITKIRQEYYFYTNKYLSAPIQTTAIFHPAYLLRQPMQKRTS 243

Query: 248 WHALITLKKALKN 260
           W+ L+ +K+ L N
Sbjct: 244 WYDLLKIKEYLVN 256


>gi|157829143|ref|YP_001495385.1| N-terminus of bacteriophage-type DNA polymerase [Rickettsia
           rickettsii str. 'Sheila Smith']
 gi|165933872|ref|YP_001650661.1| uracil DNA glycosylase superfamily protein [Rickettsia rickettsii
           str. Iowa]
 gi|157801624|gb|ABV76877.1| N-terminus of bacteriophage-type DNA polymerase [Rickettsia
           rickettsii str. 'Sheila Smith']
 gi|165908959|gb|ABY73255.1| uracil DNA glycosylase superfamily protein [Rickettsia rickettsii
           str. Iowa]
          Length = 261

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 65/253 (25%), Positives = 122/253 (48%), Gaps = 9/253 (3%)

Query: 16  ALFYADSGV-YWVFDEPN----NEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSI 70
             + +  GV Y+  + P        T  +++ +  + S  + + N+       +  A S+
Sbjct: 5   LKWLSAIGVEYYCHEHPPQLKVRNNTELTEKPQVKLMSTKETVFNMNDKVHDNITLARSL 64

Query: 71  AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130
           A KA ++ ELK  L  F+ C L   + +T+         +M+IG  P  ++++ G PF G
Sbjct: 65  ADKANNIEELKESLLHFNGCELKKFATNTVFGDGNLEAKIMLIGEAPGSTEDLKGIPFYG 124

Query: 131 KTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189
           ++GN+LD ML +I I R    +I+    W PP NR  +  E++ICRP + + I LI+P++
Sbjct: 125 ESGNLLDNMLHAIGISRKNNAYITNTVFWRPPANRQPTFEEVDICRPFVEKHIALINPQL 184

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT--LATVHPQELIQYPLIKKNT 247
           ++ +G+               +   ++      +   P    A  HP  L++ P+ K+ +
Sbjct: 185 IILVGSTAATSLLG-KNSGITKIRQEYYFYTNKYLSAPIQTTAIFHPAYLLRQPMQKRTS 243

Query: 248 WHALITLKKALKN 260
           W+ L+ +K+ L N
Sbjct: 244 WYDLLKIKEYLVN 256


>gi|84500233|ref|ZP_00998499.1| uracil-DNA glycosylase [Oceanicola batsensis HTCC2597]
 gi|84392167|gb|EAQ04435.1| uracil-DNA glycosylase [Oceanicola batsensis HTCC2597]
          Length = 257

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 61/265 (23%), Positives = 109/265 (41%), Gaps = 15/265 (5%)

Query: 3   SKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPITNIRHIHS 61
            +  L       +  +  + G      D P +   +       +      P   +R    
Sbjct: 1   MESALDWHSAYALLDWQVELGADEAIGDTPVDRFAHVE--PPSAAKRKAAPEQPVRRKEI 58

Query: 62  PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121
             V+ A   AQ A SL  L+  L ++  C L   + + + +       ++I+G  P   +
Sbjct: 59  DAVEVARQAAQAAGSLDALREALGAYEHCALKRGARNLVFSDGHPAARVLILGEAPDRDE 118

Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMR------TQIHISMISPWHPPGNRNLSNIEMEICR 175
           +  G+PF G+ G +LD+ML +I++ R        ++I+ + PW P  NR+    E+ +  
Sbjct: 119 DREGRPFVGRAGRLLDRMLAAIDLDRTGETPDRAVYITNVLPWRPLQNRDPEPEEIAMML 178

Query: 176 PIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
           P + + IEL+ P  ++ +GN               +  G W+         PTL   HP 
Sbjct: 179 PFVQKHIELVDPAFVILMGNIACRAALGKQG--ILRLRGTWTEAF----GRPTLPMTHPT 232

Query: 236 ELIQYPLIKKNTWHALITLKKALKN 260
            L+Q P  K+  W  L++LK  L +
Sbjct: 233 YLLQQPRAKREAWADLLSLKVRLSS 257


>gi|159045630|ref|YP_001534424.1| uracil-DNA glycosylase [Dinoroseobacter shibae DFL 12]
 gi|157913390|gb|ABV94823.1| uracil-DNA glycosylase [Dinoroseobacter shibae DFL 12]
          Length = 265

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 62/268 (23%), Positives = 112/268 (41%), Gaps = 17/268 (6%)

Query: 3   SKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHS 61
            ++ L    +     +  + G    + D P +        + K+  +A    +       
Sbjct: 1   MEQELDYHTLRAALEWQVELGATEAISDAPVDRTVAVEPERPKAPAAAPAAPSVAAAPAP 60

Query: 62  PLVQ----QADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117
              +     A   A ++ SL  L+  L ++  C L   + + + +    G  +MI+G  P
Sbjct: 61  DGPEMAVTAARGAAAQSGSLEALRDALAAYPHCELRKGARNLVFSDGRPGARVMILGEAP 120

Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMR------TQIHISMISPWHPPGNRNLSNIEM 171
              ++  G+PF G+ G +LDKML +I + R        ++I+ I PW PP NR+    E+
Sbjct: 121 GRDEDREGRPFVGRAGQLLDKMLAAIGLARDAPDPGHAVYITNILPWRPPQNRDPRPDEI 180

Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231
            +  P + R + L  P+IL+ +GN +             +  G+W+         P L  
Sbjct: 181 AMMMPFVQRHVTLADPEILVLMGNISCQAVLGRKG--ITRLRGQWTEAMDR----PALPM 234

Query: 232 VHPQELIQYPLIKKNTWHALITLKKALK 259
            HP  L++ P  K+  W  L+ L+  LK
Sbjct: 235 FHPAFLLRQPAQKRAAWADLLDLQARLK 262


>gi|229587212|ref|YP_002845713.1| Uracil-DNA glycosylase, family 4 [Rickettsia africae ESF-5]
 gi|228022262|gb|ACP53970.1| Uracil-DNA glycosylase, family 4 [Rickettsia africae ESF-5]
          Length = 279

 Score =  199 bits (507), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 65/253 (25%), Positives = 121/253 (47%), Gaps = 9/253 (3%)

Query: 16  ALFYADSGV-YWVFDEPN----NEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSI 70
             + +  GV Y+  + P        T  +++ +  + S  +   N+       +  A S+
Sbjct: 23  LKWLSAIGVEYYCHEHPPQLKVRNNTELTEKPQVKLMSTKETAFNMNDKVHDNITLARSL 82

Query: 71  AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130
           A KA ++ ELK  L +F+ C L   + +T+         +M+IG  P   +++ G PF G
Sbjct: 83  ADKADNIEELKESLLNFNGCELKKFATNTVFGDGNLEAKIMLIGEAPGSIEDLKGIPFYG 142

Query: 131 KTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189
           ++GN+LD ML +I I R    +I+    W PP NR  +  E++ICRP + + I LI+P++
Sbjct: 143 ESGNLLDNMLHAIGISRKNNAYITNTVFWRPPANRQPTFEEVDICRPFVEKHIALINPQL 202

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT--LATVHPQELIQYPLIKKNT 247
           ++ +G+               +   ++      +   P    A  HP  L++ P+ K+ +
Sbjct: 203 IILVGSTAATSLLG-KNSGITKIRQEYYFYTNKYLSAPIQTTAIFHPAYLLRQPMQKRTS 261

Query: 248 WHALITLKKALKN 260
           W+ L+ +K+ L N
Sbjct: 262 WYDLLKIKEYLVN 274


>gi|149913413|ref|ZP_01901946.1| cytosine deaminase [Roseobacter sp. AzwK-3b]
 gi|149812533|gb|EDM72362.1| cytosine deaminase [Roseobacter sp. AzwK-3b]
          Length = 266

 Score =  199 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 59/269 (21%), Positives = 112/269 (41%), Gaps = 18/269 (6%)

Query: 3   SKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHS 61
            +          +  +  + G    + D P N           +  +  +    +    +
Sbjct: 1   MESTFDPHAAKALLDWQIELGATEAIGDLPVNRYELPDTPPAAAAATKPRAAQAVAASVA 60

Query: 62  PLVQQADSIAQKAC-----SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYT 116
           P          +A      +L  L+  L  +  C L   + + + A       +MIIG  
Sbjct: 61  PAPAADPLAEARAAAGAAGTLDALREALAGYEHCDLKRGARNLVFADGQPSARVMIIGEA 120

Query: 117 PSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI------HISMISPWHPPGNRNLSNIE 170
           P   +++ G+PF G+ G +LD+ML++I++ RT        +I+ + PW PP NR+    E
Sbjct: 121 PGRDEDLQGRPFVGRAGQLLDRMLEAIDMSRTAPEAGQAVYITNVMPWRPPQNRDPKPEE 180

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230
           + +  P + R ++L+ P+I++ +GN +             +  G+W+         PTL 
Sbjct: 181 IAMMLPFVQRHVDLVDPEIVVLMGNISCQAGLGRQG--ITRLRGQWTESY----GRPTLP 234

Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALK 259
            VHP  L++ P  K+  W  L+ L+  L+
Sbjct: 235 MVHPAYLLRNPNAKREAWADLLELQARLR 263


>gi|188583952|ref|YP_001927397.1| phage SPO1 DNA polymerase-related protein [Methylobacterium populi
           BJ001]
 gi|179347450|gb|ACB82862.1| phage SPO1 DNA polymerase-related protein [Methylobacterium populi
           BJ001]
          Length = 309

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 76/301 (25%), Positives = 122/301 (40%), Gaps = 43/301 (14%)

Query: 1   MTSKRILS--QEQILTIALFYADSGVYWVFDE---------------------------- 30
           MT+    S  +  +++   F+ ++G+    DE                            
Sbjct: 4   MTANHADSDARADLISYLDFHVEAGIDAALDERPHDRFAEAEAVQAAAPRAEPAPRREPP 63

Query: 31  -----------PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHE 79
                      P         R     +                   A + A +  +L E
Sbjct: 64  PRREAPPGEDAPLEFRRELPSRDPPPREPPRTYGNAAGAKPGEAADDARARAAQMQTLEE 123

Query: 80  LKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKM 139
           L++LLR F  C L  T+ + + A       +M +G  P   ++  GKPF G++G +LD+M
Sbjct: 124 LEALLRGFEGCTLRFTAKNLVFADGNPQARVMFVGEAPGADEDRIGKPFMGRSGQLLDRM 183

Query: 140 LQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199
           + +I + RT  +IS + PW PPGNRN +  E+ ICRP + RQIEL +P IL+ +G     
Sbjct: 184 MAAIGLDRTSAYISNVVPWRPPGNRNPTPQEISICRPFVERQIELANPDILVCLGAPATQ 243

Query: 200 FFFNNDAQKTYQNLGKWSNLC-TPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
                      +  G++     +    I  LAT+HP  L++ P+ K+  W     LK AL
Sbjct: 244 TLTGTK-DGILKARGRFYPYRLSDGREIRALATLHPAYLLRQPVQKRLAWRDFRMLKTAL 302

Query: 259 K 259
            
Sbjct: 303 D 303


>gi|150395871|ref|YP_001326338.1| phage SPO1 DNA polymerase-like protein [Sinorhizobium medicae
           WSM419]
 gi|150027386|gb|ABR59503.1| phage SPO1 DNA polymerase-related protein [Sinorhizobium medicae
           WSM419]
          Length = 289

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 89/287 (31%), Positives = 138/287 (48%), Gaps = 31/287 (10%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEAT----------------------- 36
           M S   LS  ++  +  F+A++GV W+  +EP +                          
Sbjct: 1   MISANDLSPSELAALLAFHAEAGVEWLIEEEPLDRLAEFEAMRMRRTESRAAPQANEMAA 60

Query: 37  ------YESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
                  E+  +E++  +       +       +++A  +A  A SL EL++ + +F  C
Sbjct: 61  ERRQPVPETTARERAQAAPTARPPVVAIPDEQAIKEAQFVAGAARSLGELRTAMEAFSGC 120

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150
           +L +++ + + A  +    +MIIG  P   D+  G PF+G+ G ML++ML  I + R  +
Sbjct: 121 NLRNSARNLVFAEGSAASGVMIIGPMPYADDDRDGHPFAGRHGQMLERMLFGIGLSRDDV 180

Query: 151 HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210
            ++   PW PPGNR  S  E +ICRP I RQIEL  PK LL +GN T  FFF        
Sbjct: 181 LLTNTVPWRPPGNRVPSAREADICRPFIERQIELAEPKQLLLLGNFTARFFFGGAEMIH- 239

Query: 211 QNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKA 257
           Q  G+W  L    + IP LAT+HPQ+LI  P+ K+  W  L+  K  
Sbjct: 240 QLRGEWRELTFAGTSIPALATLHPQDLIAAPINKRFAWLDLLAFKSR 286


>gi|163853643|ref|YP_001641686.1| phage SPO1 DNA polymerase-related protein [Methylobacterium
           extorquens PA1]
 gi|163665248|gb|ABY32615.1| phage SPO1 DNA polymerase-related protein [Methylobacterium
           extorquens PA1]
          Length = 323

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 77/315 (24%), Positives = 122/315 (38%), Gaps = 57/315 (18%)

Query: 1   MTSKRILSQE--QILTIALFYADSGVYWVFDE---------------------PNNEATY 37
           MT+    +     +++   F+  +GV    DE                     P      
Sbjct: 4   MTANHADTDARGDLISFLDFHVAAGVDAALDEQPHDRFAEAESVRADAASQAEPATRREP 63

Query: 38  ESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKA----------------------- 74
              R+E     +  P  +      P +     +  +                        
Sbjct: 64  LEPRREPLPPRSEPPRRDAPSAEEPPLAFRRELPSRDAPTREPPRTYGNAAGAKPGEAAD 123

Query: 75  ---------CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISG 125
                     +L EL+ LLR F  C L  T+ + + A       +M +G  P   ++  G
Sbjct: 124 DARARAAQMKTLDELEELLRGFEGCGLRFTAKNLVFADGNPQARVMFVGEAPGADEDRIG 183

Query: 126 KPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELI 185
           KPF G++G +LD+M+ +I + RT  +IS + PW PPGNRN +  E+ ICRP + RQIEL 
Sbjct: 184 KPFMGRSGQLLDRMMAAIGLDRTSAYISNVVPWRPPGNRNPTPQEISICRPFVERQIELA 243

Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP-HSIIPTLATVHPQELIQYPLIK 244
           +P IL+ +G                +  G++          I  LAT+HP  L++ P+ K
Sbjct: 244 NPDILVCLGAPATQTLTGTK-DGILKARGRFYPYRLGDGREIRALATLHPAYLLRQPVQK 302

Query: 245 KNTWHALITLKKALK 259
           +  W     LK AL 
Sbjct: 303 RLAWRDFRMLKSALD 317


>gi|114328513|ref|YP_745671.1| uracil DNA glycosylase superfamily protein [Granulibacter
           bethesdensis CGDNIH1]
 gi|114316687|gb|ABI62747.1| uracil DNA glycosylase superfamily protein [Granulibacter
           bethesdensis CGDNIH1]
          Length = 282

 Score =  199 bits (505), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 70/281 (24%), Positives = 116/281 (41%), Gaps = 33/281 (11%)

Query: 11  QILTIALFYADSGVYWVF-DEPNNEATYESQRKEK---------SIDSAIQPITNIRHIH 60
             L       + G      D P +  T  +   +              A  P      + 
Sbjct: 2   DALAALHLQLEWGADEALGDSPVDRFTIVTAPAQAHSGIAPAELQTVPAAAPHPEPHSVP 61

Query: 61  SPLVQQADSIAQKAC-------------------SLHELKSLLRSFHDCHLCSTSLSTIC 101
              VQ+    A  A                    +L  L++ +  F  C L +T+   + 
Sbjct: 62  VQAVQRPAPFAGTASLLPQQGAARLAADIAAEASTLDALRAAMEQFDACPLKATATQLVF 121

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH-ISMISPWHP 160
           +  T    LM+IG  P   ++ +GKPF G +G  LD+ML S  + R +   I+ + PW P
Sbjct: 122 SDGTYEAGLMLIGEAPGAEEDRAGKPFVGPSGKFLDRMLASAGMTRERDFVIANLIPWRP 181

Query: 161 PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220
           PGNRN +  E+  C P ++R I L  P++L+ +G  +      +      +  GKW+++ 
Sbjct: 182 PGNRNPTETEILQCLPFLLRHIALARPRMLVCLGGVSAKALTGST-VGIRRLRGKWTDIT 240

Query: 221 TPHS--IIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
            P     +P L  +HP  L++ P  K+  W  ++TL+KAL 
Sbjct: 241 IPGLDSPLPMLPMLHPAYLLRNPGAKREAWADILTLRKALD 281


>gi|254797255|ref|YP_003082097.1| uracil-DNA glycosylase, family 4 [Neorickettsia risticii str.
           Illinois]
 gi|254590499|gb|ACT69861.1| uracil-DNA glycosylase, family 4 [Neorickettsia risticii str.
           Illinois]
          Length = 247

 Score =  199 bits (505), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 63/247 (25%), Positives = 111/247 (44%), Gaps = 7/247 (2%)

Query: 15  IALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKA 74
           I  FY   G+         + +  +Q     +      +       +   +  +      
Sbjct: 2   ILKFYDRLGIGVTT----ADISSPNQASITRVTGMPIDMKEFTESTACKYKTPERDLTCV 57

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            +L ELK+L+ +F  C L + + +T+         +M+IG  P + ++  G PF G++GN
Sbjct: 58  TTLDELKTLVSNFEGCQLKNNAKNTVFCDGNPDAKIMLIGEAPGEQEDKLGIPFCGRSGN 117

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           +LDKMLQ+I + RT+++I+    W PPGNR  +  E+EICRP +   I L+ PK+++ +G
Sbjct: 118 LLDKMLQAIGLDRTKVYITNAVFWRPPGNRRPTPEEIEICRPFLEHHIRLVLPKLIVLLG 177

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATVHPQELIQYPLIKKNTWHALI 252
           +   +        +      K+     P     I T    HP  L++ P  KK  W  L 
Sbjct: 178 STATSSVLK-SQDRISILRNKFYEYKNPFIREGITTTVMFHPSYLLRQPAQKKLAWEDLK 236

Query: 253 TLKKALK 259
            ++  + 
Sbjct: 237 LIRSYID 243


>gi|254471665|ref|ZP_05085066.1| bacteriophage-type DNA polymerase N-terminal domain protein
           [Pseudovibrio sp. JE062]
 gi|211958867|gb|EEA94066.1| bacteriophage-type DNA polymerase N-terminal domain protein
           [Pseudovibrio sp. JE062]
          Length = 331

 Score =  198 bits (504), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 70/329 (21%), Positives = 129/329 (39%), Gaps = 71/329 (21%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFD----------------------------EPN 32
           M+   + +  ++     F +  GV    +                             P 
Sbjct: 1   MSEVPVANAAELEAYLEFLSAVGVDCAMEDAPIDRFAQTQAQMEKQAQARPAPQQNFAPT 60

Query: 33  NEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQK------------------- 73
           N        + +  + ++ P    R++    V   D +  +                   
Sbjct: 61  NSFASPEPTQSQPKNLSVSPAEMARNLRENGVSADDKMKARQILERQRAAKESAVQTVMP 120

Query: 74  -----------------------ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
                                  A SL EL+ +L  F  C+L  T+ + +    +    +
Sbjct: 121 NAADNAVVPNAETVGSARSAASSAQSLDELRKILSGFEGCNLRLTAKNLVFGDGSSKARV 180

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170
           M +G  P   ++I G PF G++G++LD+ML+++ + R+ ++I+ + PW PPGNR  +  E
Sbjct: 181 MFVGEAPGREEDIQGVPFVGRSGHLLDRMLKAVGLDRSNVYIANVVPWRPPGNRTPTPHE 240

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230
            EICRP I RQIEL+ P+I++F+G  +             +  GKW       +    +A
Sbjct: 241 TEICRPFIQRQIELVDPEIVVFLGAASAKTLSGAR-DGIRKLRGKWLTYNGEGTQRKAIA 299

Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALK 259
           T HP  L++ P  K+  W  ++ ++  L+
Sbjct: 300 TYHPAYLLRSPAEKRYAWRDMLQIRAELE 328


>gi|297183987|gb|ADI20107.1| uracil-DNA glycosylase [uncultured alpha proteobacterium
           EB080_L06A09]
          Length = 264

 Score =  198 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 65/270 (24%), Positives = 120/270 (44%), Gaps = 18/270 (6%)

Query: 3   SKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSA-----IQPITNI 56
                S  +      +  + GV     D P N    E+   E  I+       +  + +I
Sbjct: 1   MSNSQSFYEAKLALEWQYEFGVDEAISDAPINRYEIETVPPELKINPKSNIAHVSSMPDI 60

Query: 57  RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYT 116
                     A  +A+   +L EL+  +  F  C L   + + + +       +M+IG  
Sbjct: 61  LSSRETASDVAKILAKNCDNLTELRDAIGLFEMCSLKKGAKNLVFSDGPSNSRVMVIGEA 120

Query: 117 PSDSDNISGKPFSGKTGNMLDKMLQSIEIMRT------QIHISMISPWHPPGNRNLSNIE 170
           P+  ++  GKPF G  G ++DKM Q+I + R        I+I+   PW PP +R+ S+ E
Sbjct: 121 PTREEDSEGKPFVGAEGELVDKMFQAIGLSRRASDPNDAIYITTAIPWRPPQSRDPSSDE 180

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230
           + +  P + R IELI+P  ++ +GN   +   N       +  G+W+           + 
Sbjct: 181 IAMMVPFLKRHIELINPDFIVLMGNIACSAVLNKVGIN--KFRGEWTEALGK----KIIP 234

Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALKN 260
            +HP+ L++ P+ K++ W+ L++LK+ L +
Sbjct: 235 MLHPRSLLRDPMRKRDAWNDLLSLKEQLNS 264


>gi|162455919|ref|YP_001618286.1| DNA-directed DNA polymerase [Sorangium cellulosum 'So ce 56']
 gi|161166501|emb|CAN97806.1| DNA-directed DNA polymerase [Sorangium cellulosum 'So ce 56']
          Length = 215

 Score =  198 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 4/209 (1%)

Query: 50  IQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD 109
             P               D+  ++A  L  L   +R+   C L      T+ +      +
Sbjct: 3   AAPAHRADTAARASATLPDTKEERAARLSLLAEEVRTCQKCPLHEGRTHTVFSRGDPSSE 62

Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI 169
           ++ +G  P   +++ G+PF G  G +LDKM+ ++   R +++I  I    PP NR     
Sbjct: 63  VVFVGEGPGAEEDLQGQPFVGAAGQLLDKMIAAMGYHRDEVYICNIVKCRPPKNRKPEPA 122

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           EM  C P +  Q+ LI PK+++ +G           ++   +  G W         IP +
Sbjct: 123 EMAACSPYLTAQLALIKPKVIVALGATAVQGLIG-TSEGITKLRGTWKLYK---GSIPIM 178

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKAL 258
            T HP  L++ P  K+  W  L  + + L
Sbjct: 179 PTFHPAYLLRQPSAKREVWSDLKEVMRHL 207


>gi|209966444|ref|YP_002299359.1| uracil-DNA glycosylase, family 4 protein, putative [Rhodospirillum
           centenum SW]
 gi|209959910|gb|ACJ00547.1| uracil-DNA glycosylase, family 4 protein, putative [Rhodospirillum
           centenum SW]
          Length = 298

 Score =  198 bits (503), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 68/287 (23%), Positives = 120/287 (41%), Gaps = 40/287 (13%)

Query: 14  TIALFYADSGVYWVF-DEPNNEAT---------YESQRKEK------------------- 44
               F A+ G      D P +             E+ R                      
Sbjct: 9   AALRFLAEIGADEAVNDRPTDWTAIAARGRAVGPETDRPSAAVPPRAPGPARPGAARPAA 68

Query: 45  --SIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICA 102
                +     +      +   Q A + A  A +L ELK+ L +F  C L  T+ S + A
Sbjct: 69  SGPATAGAVSASPPPLGAAESSQTARAAAAAAATLPELKAALAAFEGCALRHTATSLVFA 128

Query: 103 TQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI------HISMIS 156
                  +M++G  P + ++  G+PF G  G +LD+ML +I + R         +I+ + 
Sbjct: 129 DGDPAARVMLVGEAPGEQEDRQGRPFVGPAGLLLDRMLAAIGLDRRADTPDRAVYITNVV 188

Query: 157 PWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKW 216
            W PPGNR+ ++ E+  C P + R I+L++P +L+F+G  +         +   +  G+W
Sbjct: 189 NWRPPGNRSPTDGEIAACLPFVQRHIDLVNPAVLVFLGGISAKSLLQRT-EGITRLRGRW 247

Query: 217 SNLCTPH--SIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
            +  +P     +P L  +HP  L++ P  K+  W  L+ L++ L+ L
Sbjct: 248 FDYASPGLSRPLPALPMLHPAYLLRNPAAKREAWKDLLALQERLEAL 294


>gi|157964995|ref|YP_001499819.1| uracil-DNA glycosylase [Rickettsia massiliae MTU5]
 gi|157844771|gb|ABV85272.1| Uracil-DNA glycosylase, family 4 [Rickettsia massiliae MTU5]
          Length = 294

 Score =  198 bits (502), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 64/253 (25%), Positives = 122/253 (48%), Gaps = 9/253 (3%)

Query: 16  ALFYADSGV-YWVFDEP----NNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSI 70
             + +  GV Y+  + P        T  +++ +  + S  +   N+       +  + S+
Sbjct: 38  LKWLSAIGVEYYCHEHPTQLKVRNNTELTEKPQVKLKSTKETAFNMNDKVHENITLSRSL 97

Query: 71  AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130
           A KA ++ ELK  L +F+ C L   + +T+         +M+IG  P  ++++ G PF G
Sbjct: 98  ADKANNIEELKESLLNFNGCELKKFATNTVFGDGNLEAKIMLIGEAPGSTEDLKGIPFYG 157

Query: 131 KTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189
           ++GN+LD ML +I I R    +I+    W PP NR  +  E++ICRP + + I LI+PK+
Sbjct: 158 ESGNLLDNMLHAIGISRKNNAYITNTVFWRPPANRQPTFEEVDICRPFVEKHIALINPKL 217

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT--LATVHPQELIQYPLIKKNT 247
           ++ +G+               +   ++      +   P    A  HP  L++ P+ K+ +
Sbjct: 218 IILVGSTAATSLLG-KNSGITKIRQEYYFYTNKYLSAPIQTTAIFHPAYLLRQPMQKRTS 276

Query: 248 WHALITLKKALKN 260
           W+ L+ +K+ + N
Sbjct: 277 WYDLLKIKEYVVN 289


>gi|85704408|ref|ZP_01035510.1| hypothetical protein ROS217_04999 [Roseovarius sp. 217]
 gi|85670816|gb|EAQ25675.1| hypothetical protein ROS217_04999 [Roseovarius sp. 217]
          Length = 264

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 63/267 (23%), Positives = 114/267 (42%), Gaps = 15/267 (5%)

Query: 3   SKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAI--QPITNIRHI 59
            +  L     L   ++  + G    + D P N      +  + +       +P   +   
Sbjct: 1   MESTLRPHDALASLVWQIELGATEAICDAPINRYDLPDKVAKPAAAPKAEGRPAAPVAPE 60

Query: 60  HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSD 119
            S  V  A + A  A     L++ L ++  C L   + + +         +MIIG  P  
Sbjct: 61  SSDPVAVARASATAAPDRDALRAALGAYPHCDLKRGARNLVFCDGNPAARVMIIGEAPGR 120

Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMR------TQIHISMISPWHPPGNRNLSNIEMEI 173
            +++ G PF G+ G +LD+ML +I + R        ++I+ + PW PP NR+ S  E+ +
Sbjct: 121 DEDLQGLPFVGRAGQLLDRMLAAIGLTRGADAPQEAVYITNVLPWRPPQNRDPSTEEIAM 180

Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
            RP + R ++LI+P +++ +GN + +           +  G W+         P L   H
Sbjct: 181 MRPFVARHVDLIAPDLIVLMGNISCDAGLGKRG--ITRLRGTWAEAYGK----PALPMFH 234

Query: 234 PQELIQYPLIKKNTWHALITLKKALKN 260
           P  L++ P  K+  W  L+ LK  L+ 
Sbjct: 235 PAYLLRTPAAKREAWADLLALKARLRE 261


>gi|16125582|ref|NP_420146.1| phage SPO1 DNA polymerase-like protein [Caulobacter crescentus
           CB15]
 gi|221234331|ref|YP_002516767.1| uracil DNA glycosylase superfamily protein [Caulobacter crescentus
           NA1000]
 gi|13422678|gb|AAK23314.1| phage SPO1 DNA polymerase-related protein [Caulobacter crescentus
           CB15]
 gi|220963503|gb|ACL94859.1| uracil DNA glycosylase superfamily protein [Caulobacter crescentus
           NA1000]
          Length = 273

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 67/265 (25%), Positives = 114/265 (43%), Gaps = 14/265 (5%)

Query: 7   LSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPITN----IRHIHS 61
           + Q  + ++  F+AD+GV  ++ D P +     +            P       +  + S
Sbjct: 5   VDQRAVESLLAFWADAGVEALYADAPIDRLAEGAAMLRAKSQPPPPPAPVARPGMAMVRS 64

Query: 62  PLVQQADSIAQK----ACSLHELKSLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYT 116
           P +  A + A+        L  L + + +F  C L    +   + +       LMIIG  
Sbjct: 65  PDIASAVAAAKAAAAACNDLESLAAAIAAFEGCPLKSQGAKQAVFSRGVSDAQLMIIGEG 124

Query: 117 PSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP 176
           P   ++  G+PF G+ G +LD+ML++  +   ++ I+    W PPGNR  +  E   C P
Sbjct: 125 PGADEDAQGQPFVGRAGKLLDRMLKAAGLEE-RVFITNTVFWRPPGNRTPTPQEQATCAP 183

Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI--IPTLATVHP 234
            + R I L+ PK+LL  G  +       D        G+W    +      +P + T+HP
Sbjct: 184 FVERAIALVKPKMLLLAGGASAKAMLKRDEGILT-MRGRWFEWVSEDQSLELPAMPTLHP 242

Query: 235 QELIQYPLIKKNTWHALITLKKALK 259
             L++ P  KK  W  L+TL + L 
Sbjct: 243 AFLLRTPAQKKKAWQDLLTLTERLD 267


>gi|328948441|ref|YP_004365778.1| phage SPO1 DNA polymerase-related protein [Treponema succinifaciens
           DSM 2489]
 gi|328448765|gb|AEB14481.1| phage SPO1 DNA polymerase-related protein [Treponema succinifaciens
           DSM 2489]
          Length = 289

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 58/234 (24%), Positives = 98/234 (41%), Gaps = 4/234 (1%)

Query: 26  WVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLR 85
            + +  ++    E   + K+ + A       +         A+    +  +L  + + + 
Sbjct: 45  EIPEFEDDIEIPEEHEEIKTQEHAQVQPNTFQIPAEQ--NSAEKAPSQGATLESIATKIA 102

Query: 86  SFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI 145
           S  +C LC    +T+     E   +M+IG  P + ++ +G+PF GK G +LDKML +I +
Sbjct: 103 SCKNCILCKARTNTVPGEGVENPYVMVIGEGPGEDEDKTGRPFVGKAGQLLDKMLAAISL 162

Query: 146 MR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204
            R T  +I+ I    PP NR     E   C   +  QI ++ PK +L +G        + 
Sbjct: 163 GRTTNCYIANIVKCRPPMNRTPMPDEAHACSGYLQAQIHILKPKYILAMGRTAVQNLLDT 222

Query: 205 DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
                    GKW       + IP LAT HP  L++    K+  W  L   K  +
Sbjct: 223 QEGINS-LRGKWLEYSLGETKIPLLATYHPSALLRNESFKRPAWEDLKVFKSRI 275


>gi|326402981|ref|YP_004283062.1| uracil-DNA glycosylase [Acidiphilium multivorum AIU301]
 gi|325049842|dbj|BAJ80180.1| uracil-DNA glycosylase [Acidiphilium multivorum AIU301]
          Length = 276

 Score =  197 bits (500), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 68/238 (28%), Positives = 104/238 (43%), Gaps = 10/238 (4%)

Query: 21  DSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHEL 80
           + G      E   +    S+    +  +   P T +R   +P        A  A S  EL
Sbjct: 25  EWGADEALLETPPDRAAASRPASPAPAAPSAPGTVVRLPTAPS-------APGAASFAEL 77

Query: 81  KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML 140
           ++ L +F  C L  T+   + A   E   +MIIG  P   ++  G+PF G  G +LDKML
Sbjct: 78  RAALEAFDQCALKRTATQLVFADGAEDARIMIIGEAPGGEEDRIGRPFVGPAGQLLDKML 137

Query: 141 QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF 200
            SI + R  + I  + PW PPGNR  S+ E+  C P + R I L+ P+ L+ +G      
Sbjct: 138 GSIGLDRGTVRIVNVVPWRPPGNRTPSDTEIAQCLPFLHRHIALVRPERLVLLGAVAVRA 197

Query: 201 FFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                     +  GKW  +        +  L T HP  L++ P  K+  W  L+ L++
Sbjct: 198 LIGGK-DGITRLRGKWREVTIEGLDQTLRALPTYHPAYLLRQPAAKRLAWADLLELRR 254


>gi|283779751|ref|YP_003370506.1| phage SPO1 DNA polymerase-like protein [Pirellula staleyi DSM 6068]
 gi|283438204|gb|ADB16646.1| phage SPO1 DNA polymerase-related protein [Pirellula staleyi DSM
           6068]
          Length = 292

 Score =  197 bits (500), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 54/289 (18%), Positives = 103/289 (35%), Gaps = 38/289 (13%)

Query: 3   SKRILSQEQILTIALFYADSGVYWVFD--------------EPNNEATYESQRKEKSIDS 48
              +++++ +L      A +GV  +                   +              +
Sbjct: 1   MDELVTRKLLLQSLESLARAGVDQLQRGVPLGVLPAPAATAARPDSPAASMPLPSPPAAT 60

Query: 49  AIQPITNIRHIHSPLVQQADSIAQKACSLH------------------ELKSLLRSFHDC 90
           A +P+       +P   +          L                   +LK+ +     C
Sbjct: 61  ADRPMPTRLAAPTPPPFEPRLAVPATSDLEPVMAKKSAAKSAACASLDDLKAEVAGCKLC 120

Query: 91  -HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQ 149
             L  T   T+         ++I G  P   ++ +G+PF G+ G +L K++++    R +
Sbjct: 121 KELARTRKQTVFGIGNPQPRVVIFGEAPGADEDRTGEPFVGRAGQLLTKIIEACGWKREE 180

Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209
           ++I  +    PP NR     E+E CRP   RQIEL++P+ ++ +G            +  
Sbjct: 181 VYILNVLKCRPPDNRTPVEEEIENCRPFFERQIELLAPEYIVCVGTVPSQALL-RTKEPV 239

Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
            +  G++            L T HP  L++ P  KK  W  +  L K +
Sbjct: 240 GRLRGRFHEYN----GRSVLVTYHPSYLLRNPSAKKFVWDDMQMLLKKM 284


>gi|329890553|ref|ZP_08268896.1| uracil-DNA glycosylase [Brevundimonas diminuta ATCC 11568]
 gi|328845854|gb|EGF95418.1| uracil-DNA glycosylase [Brevundimonas diminuta ATCC 11568]
          Length = 282

 Score =  197 bits (500), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 62/263 (23%), Positives = 106/263 (40%), Gaps = 7/263 (2%)

Query: 2   TSKRILSQEQILTIALFYADSGVYWVFD-EPNNEATYESQRKEK-SIDSAIQPITNIRHI 59
            +   L       +  F+ D+GV   F+ EP +   + +    K                
Sbjct: 14  MNAPSLDMAAAEALFAFWRDAGVDACFEAEPVDRTVFVAPVAAKGPATITPLRAPGAPPS 73

Query: 60  HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS-TSLSTICATQTEGQDLMIIGYTPS 118
                 +A  +A  A +L EL   + +F  C L +  +  ++ A       LMI+G  P 
Sbjct: 74  VDEAAVEARRLAACATTLDELAEAVAAFEGCPLRAMGARQSVFARGNPQGSLMIVGEGPG 133

Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPII 178
             +++ G+PF G+ G +LD++L +  +      I+    W  PGNR  +  E  +C P +
Sbjct: 134 AEEDVRGQPFVGQAGQLLDRILTAAGL-LDDAFITNTVFWKTPGNRTPTPQEQAVCAPFL 192

Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII--PTLATVHPQE 236
            R   L+ PK +L +G          D     +  G+W         I  P +AT+HP  
Sbjct: 193 ERAAALLKPKAVLLVGAAAAKAVLKTDDGIM-RTRGQWREWRLSEDGIAAPVMATLHPAF 251

Query: 237 LIQYPLIKKNTWHALITLKKALK 259
           L++ P  K   W  ++ L   L+
Sbjct: 252 LLRQPQAKGLVWKDILDLSARLR 274


>gi|325292366|ref|YP_004278230.1| DNA polymerase bacteriophage-type [Agrobacterium sp. H13-3]
 gi|325060219|gb|ADY63910.1| putative DNA polymerase bacteriophage-type [Agrobacterium sp.
           H13-3]
          Length = 299

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 88/299 (29%), Positives = 133/299 (44%), Gaps = 40/299 (13%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDE-PNNEA------------------------ 35
           M +   LS  ++  +  F+AD+GV W+ ++ P +                          
Sbjct: 1   MIAAHDLSPAELAALLHFHADAGVDWLLEDGPVDRFAEFAASRPARPAARQESSAPAHQM 60

Query: 36  --------------TYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELK 81
                         T       +    A     N+       V  A   A+ A SL ELK
Sbjct: 61  DSGTERRADAPQRQTAGRSAPTRGAPPAPALQQNVAMPDEQAVAAARFAAESARSLSELK 120

Query: 82  SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
             L  F  C+L +++ +T+         +M+IG  P   D+  G+ F+GKTG +LD+ML 
Sbjct: 121 IALEGFSGCNLKNSARNTVFTEGDPACAVMVIGPMPDADDDREGQLFAGKTGLLLDRMLA 180

Query: 142 SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
           +I + R +I +  + PW PPGNR  +  EM+ICRP I RQI L  PK LL +GN T  FF
Sbjct: 181 AIGLDRARIMLGNVVPWRPPGNRPPTQAEMDICRPFIERQIALAEPKHLLLLGNLTARFF 240

Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
           F           G+W ++   H ++P LA++HPQEL+  P  K   W  L+  +  +  
Sbjct: 241 FGGTGTIHT-LRGQWRDVAAGHLVLPALASLHPQELLNAPASKSLAWQDLLAFQAKISE 298


>gi|86158792|ref|YP_465577.1| phage SPO1 DNA polymerase-like protein [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|85775303|gb|ABC82140.1| phage SPO1 DNA polymerase-related protein [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 245

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 50/223 (22%), Positives = 86/223 (38%), Gaps = 5/223 (2%)

Query: 36  TYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCST 95
                    +               +     A      + +L +++  L     C L   
Sbjct: 21  APVGTAPVTTPPPGQDTPPAGTQEATSRPSAAGEKGCGSEALVQVRDALGDCRRCKLAGG 80

Query: 96  SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMI 155
             + +        +L+ +G  P   ++  G+PF GK G +L KM+Q++   R Q++I+ +
Sbjct: 81  RTTLVFGVGNPHAELVFVGEGPGADEDREGEPFVGKAGQLLTKMIQAMGYQREQVYIANV 140

Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK 215
               PPGNRN    E+E C P +  Q+  I P++++ +G          D     +  G 
Sbjct: 141 VKCRPPGNRNPEPDEIEACEPFLRAQLAAIRPRVVVALGKFAAQTLL-RDTTPITRLRGG 199

Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
           W         I  + T HP  L++ P  KK  W  L  + K L
Sbjct: 200 WREYE----GIRLMPTFHPAYLLRSPEEKKKAWEDLQLVMKEL 238


>gi|77464581|ref|YP_354085.1| hypothetical protein RSP_1001 [Rhodobacter sphaeroides 2.4.1]
 gi|77388999|gb|ABA80184.1| hypothetical protein RSP_1001 [Rhodobacter sphaeroides 2.4.1]
          Length = 260

 Score =  196 bits (498), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 59/250 (23%), Positives = 106/250 (42%), Gaps = 15/250 (6%)

Query: 18  FYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLV--QQADSIAQKA 74
           +  D G    + D P N       +      +A    T      +     ++A   A  A
Sbjct: 15  WQVDLGATEAILDAPVNRYELGDAQPVPKAAAAAVAATAAPDPVAAADPVEEARRAAAAA 74

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            +L  L+  + ++  C L   + +T+ +       LM+IG  P   ++ +G+PF G+ G 
Sbjct: 75  PTLEALREAMAAYDHCDLKRGARNTVFSDGHPAARLMLIGEAPGREEDAAGRPFVGRAGQ 134

Query: 135 MLDKMLQSIEIMRTQI------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188
           +LD+M  +I + RT        +I+ + PW PP NR+ S  E+ +  P + R +EL +P 
Sbjct: 135 LLDRMFAAIGLSRTSPDAETALYITNVMPWRPPQNRDPSAEEVAMMTPFLARHVELAAPD 194

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW 248
           +++  GN               +  G+W+         P +   HP  L++ P  K+  W
Sbjct: 195 LIVVTGNTACAALLGRTG--ITRLRGRWAEAW----GRPVMPMCHPAYLLRNPEAKREAW 248

Query: 249 HALITLKKAL 258
             L+ +K  L
Sbjct: 249 ADLLEVKARL 258


>gi|108760490|ref|YP_632566.1| uracil-DNA glycosylase [Myxococcus xanthus DK 1622]
 gi|108464370|gb|ABF89555.1| uracil-DNA glycosylase, family 4 [Myxococcus xanthus DK 1622]
          Length = 186

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 5/182 (2%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L E++  L     C+LCST  + +  +     +L+ +G  P +++++ G PF G  G++L
Sbjct: 2   LDEIRRELGDCQRCNLCSTRKNLVFGSGNPRAELVFVGEGPGENEDLQGVPFVGAAGDLL 61

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            KM+ ++   R  ++I  +    PPGNRN    E+  C P +  Q+  I PK+++ +G  
Sbjct: 62  TKMIGAMGYRRDDVYICNVVKCRPPGNRNPEPEEVAACEPFLRAQLAAIQPKVVVALGKF 121

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                   D+    +  G W         I  + T HP  L++ P  K+  W  L  + K
Sbjct: 122 AAQTLL-RDSTPITRLRGNWRTYE----GIQLMPTFHPAYLLRSPAEKRKAWEDLQAVMK 176

Query: 257 AL 258
            L
Sbjct: 177 VL 178


>gi|144897951|emb|CAM74815.1| Uracil DNA glycosylase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 250

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 59/192 (30%), Positives = 98/192 (51%), Gaps = 3/192 (1%)

Query: 70  IAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129
           +  K   L +L+  + +F    L  T++ST+ A      D+M IG  P   ++  G PF 
Sbjct: 57  LGGKVSDLAQLRQAMEAFDALPLKRTAMSTVFADGNPDADIMCIGEAPGQEEDRQGLPFV 116

Query: 130 GKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189
           GK+G +LD+ML SI + R  ++IS + PW P  NR  +  E+ +C P I R IEL+ PK+
Sbjct: 117 GKSGKLLDRMLASIGLDRGSVYISNVVPWRPVDNRKPTADEVAVCLPFITRHIELVDPKL 176

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP--TLATVHPQELIQYPLIKKNT 247
           L+  G    +      ++   +  G+W +  +P    P   + T HP  L++ P  K+  
Sbjct: 177 LILFGGAAASALLG-RSEGINRLRGRWFDYSSPGLPRPVAVMPTFHPAYLLRTPAAKREA 235

Query: 248 WHALITLKKALK 259
           W  L+ ++K + 
Sbjct: 236 WRDLLAVRKRID 247


>gi|148264964|ref|YP_001231670.1| phage SPO1 DNA polymerase-related protein [Geobacter uraniireducens
           Rf4]
 gi|146398464|gb|ABQ27097.1| phage SPO1 DNA polymerase-related protein [Geobacter uraniireducens
           Rf4]
          Length = 259

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 104/249 (41%), Gaps = 8/249 (3%)

Query: 10  EQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADS 69
             +        ++GV  +   P  E    S        +              +   +++
Sbjct: 12  ASLRAYLEELQETGVDGL---PFAETAPSSAAGPLKKSAPDSIAFPASAPGMSVKTPSEA 68

Query: 70  IAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129
              K  +L EL+  L +   C L  T  + +         L+ +G  P   +++ G+PF 
Sbjct: 69  AGGKGETLEELRLELAACSRCKLGETRTNLVFGVGNPHARLVFVGEAPGRDEDLQGEPFV 128

Query: 130 GKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189
           G+ G +L K++++++  R +++I  +    PP NRN    E+E C+P ++RQ++ I P++
Sbjct: 129 GEAGQLLTKIIEAMQFKRNEVYICNVLKCRPPNNRNPQQDEIEQCQPFLLRQLKAIGPEV 188

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249
           ++ +G            +   +  G++ +       IP + T HP  L++   +K+  W 
Sbjct: 189 IVCLGTFAAQTLL-ETKEPISKMRGRFHDY----HGIPLMPTFHPAYLLRNAGMKREVWS 243

Query: 250 ALITLKKAL 258
            +  +   L
Sbjct: 244 DMQQVMNLL 252


>gi|51474012|ref|YP_067769.1| DNA polymerase [Rickettsia typhi str. Wilmington]
 gi|51460324|gb|AAU04287.1| DNA polymerase, bacteriophage-type [Rickettsia typhi str.
           Wilmington]
          Length = 258

 Score =  196 bits (497), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 63/252 (25%), Positives = 119/252 (47%), Gaps = 6/252 (2%)

Query: 14  TIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHS--PLVQQADSIA 71
            I  +    GV +   E   +    +    +     +   T     ++    +  + S+A
Sbjct: 3   DIFKWLNAIGVEYYCYEHTPQKIPNNTELTEKQQVELMHTTEAACNNNVHDNITLSRSLA 62

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
            KA ++ EL+  L +F+ C L   + +T+         +M+IG  P +++++ G PF G+
Sbjct: 63  DKANNIAELRESLLNFNGCELKKFATNTVFGDGNPQAKIMLIGEAPGNTEDLKGIPFCGE 122

Query: 132 TGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
           +GN+LD ML +I I R    +I+ +  W PP NR  +  E++ICRP + + I LI+PK+L
Sbjct: 123 SGNLLDNMLYAIGISRKNNFYITNMVFWRPPANRQPTLEEVDICRPFVEKHIALINPKLL 182

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT--LATVHPQELIQYPLIKKNTW 248
           + +G+               +   ++      +   P    A  HP  L++ P+ K+ +W
Sbjct: 183 ILVGSTAATSLLG-KNSCITKIRQEYYFYTNKYISTPIQTTAIFHPAYLLRQPMQKRTSW 241

Query: 249 HALITLKKALKN 260
           + L+ +K+ L N
Sbjct: 242 YDLLKIKEYLVN 253


>gi|78223867|ref|YP_385614.1| Phage SPO1 DNA polymerase-related protein [Geobacter
           metallireducens GS-15]
 gi|78195122|gb|ABB32889.1| Phage SPO1 DNA polymerase-related protein [Geobacter
           metallireducens GS-15]
          Length = 253

 Score =  196 bits (497), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 51/251 (20%), Positives = 102/251 (40%), Gaps = 13/251 (5%)

Query: 8   SQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQA 67
           +   +        ++GV  +       A    + +      A+ P +           QA
Sbjct: 7   TIASLRRYLEELKETGVDEI-----PRAAASREEQPVPPPEAVAPASVPASSAPVAEPQA 61

Query: 68  DSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127
            +  +   +L +++  L     C L     + +         L+ IG  P   +++ G+P
Sbjct: 62  ATAGE---TLDDIRRDLGECVRCQLGKQRTNLVFGVGNPRARLVFIGEAPGRDEDLKGEP 118

Query: 128 FSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP 187
           F G+ G +L K++Q++   R +++I  +    PPGNRN  + E+  C P ++RQ+  I P
Sbjct: 119 FVGEAGQLLTKIIQAMGFARDEVYICNVLKCRPPGNRNPHHDEIVQCAPFMLRQVRAIGP 178

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247
           + ++ +G            +      G++ +       IP + T HP  L++YP  K+  
Sbjct: 179 EAVVALGTFAAQTLLATK-EPISALRGRFHDY----HGIPLMPTFHPAFLVRYPERKREV 233

Query: 248 WHALITLKKAL 258
           W  +  +   L
Sbjct: 234 WDDMKQVMALL 244


>gi|15604675|ref|NP_221193.1| hypothetical protein RP845 [Rickettsia prowazekii str. Madrid E]
 gi|3861370|emb|CAA15269.1| unknown [Rickettsia prowazekii]
 gi|292572506|gb|ADE30421.1| Uracil-DNA glycosylase, family 4 [Rickettsia prowazekii Rp22]
          Length = 258

 Score =  195 bits (496), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 63/252 (25%), Positives = 122/252 (48%), Gaps = 6/252 (2%)

Query: 14  TIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNI--RHIHSPLVQQADSI 70
            +  +    GV Y+ ++         +    +     +   T     +     +  + S+
Sbjct: 3   DMFKWLNAIGVEYYCYEHTPQLKISHNTAITEKKQVKLMHTTEAVFNNNVHDNITLSRSL 62

Query: 71  AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130
           A KA ++ EL+  L +F+ C L   + +T+        ++M+IG  P +++++ G PF G
Sbjct: 63  ADKANNIVELRESLLNFNGCELKKFATNTVFGDGNPQANIMLIGEAPGNTEDLKGIPFCG 122

Query: 131 KTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
           ++GN+LD ML +I I R   +I+ +  W PP NR  +  E++ICRP + + I LI+PK+L
Sbjct: 123 ESGNLLDNMLYAIGISRNNFYITNMVFWRPPANRQPTLEEVDICRPFVEKHIALINPKLL 182

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT--LATVHPQELIQYPLIKKNTW 248
           + +G+         +A    +   ++      +   P    A  HP  L++ P+ K+ +W
Sbjct: 183 ILVGSTAATSLLGKNA-CITKIRQEYYFYTNKYISTPIQTTAIFHPAYLLRQPMQKRTSW 241

Query: 249 HALITLKKALKN 260
           + L+ +K+ L N
Sbjct: 242 YDLLKIKEYLVN 253


>gi|295689039|ref|YP_003592732.1| phage SPO1 DNA polymerase-like protein [Caulobacter segnis ATCC
           21756]
 gi|295430942|gb|ADG10114.1| phage SPO1 DNA polymerase-related protein [Caulobacter segnis ATCC
           21756]
          Length = 272

 Score =  195 bits (495), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 67/268 (25%), Positives = 111/268 (41%), Gaps = 13/268 (4%)

Query: 3   SKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQ---RKEKSIDSAIQPITNIRH 58
               + Q  + ++  F+AD+GV   + D P +           K +           +  
Sbjct: 1   MSPAVDQRAVESLLAFWADAGVEVSYADAPIDRLAEGVAMLRAKSQPPPPPPPTRPGLAA 60

Query: 59  IHSPLV----QQADSIAQKACSLHELKSLLRSFHDCHLC-STSLSTICATQTEGQDLMII 113
           +  P V      A + A     L  L + + +F  C L    +   + +       LMII
Sbjct: 61  VRGPDVGAAIAAAKAAAAACQDLDSLAAAIAAFDGCALKTQGAKQAVFSRGVADAPLMII 120

Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173
           G  P   ++  G PF G+ G +LD+ML++  +   ++ I+    W PPGNR  +  E  +
Sbjct: 121 GEGPGADEDAQGAPFVGRAGKLLDRMLKAAGL-EGRVFITNTVFWRPPGNRTPTPQEQAV 179

Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS--IIPTLAT 231
           C P + R I L+ PK+LL  G  +       D        G+W    +      +P + T
Sbjct: 180 CAPFVERAIALVKPKMLLLAGGASAKAMLKRDEGILS-MRGRWFEWLSEDKATELPAMPT 238

Query: 232 VHPQELIQYPLIKKNTWHALITLKKALK 259
           +HP  L++ P  KK  W  L+TL + L 
Sbjct: 239 LHPAFLLRTPAQKKKAWQDLLTLTERLD 266


>gi|146276280|ref|YP_001166439.1| phage SPO1 DNA polymerase-related protein [Rhodobacter sphaeroides
           ATCC 17025]
 gi|145554521|gb|ABP69134.1| phage SPO1 DNA polymerase-related protein [Rhodobacter sphaeroides
           ATCC 17025]
          Length = 259

 Score =  195 bits (495), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 59/249 (23%), Positives = 105/249 (42%), Gaps = 14/249 (5%)

Query: 18  FYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACS 76
           +  D GV   + D P N     + +      +       +    +         A  A +
Sbjct: 15  WQVDLGVTEAICDAPVNRYELVAAQPVPKATAVAVATVALDPAAAADPVAEARRAAAAAT 74

Query: 77  -LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
            L  L+  + ++  C L   + +T+         LM+IG  P   ++ +G+PF G+ G +
Sbjct: 75  DLGSLREAMAAYEHCDLKRGARNTVFCDGNASARLMLIGEAPGREEDAAGRPFVGRAGQL 134

Query: 136 LDKMLQSIEIMRTQI------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189
           LD+M  +I I RT        +I+ + PW PP NR+ S  E+ +  P + R +EL +P +
Sbjct: 135 LDRMFAAIGIARTSPDPAGALYITNVMPWRPPQNRDPSAEEVAMMTPFLERHVELAAPDL 194

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249
           ++ +GN   +           +  G+W+         P +   HP  L++ P  K+  W 
Sbjct: 195 IVVMGNTACSAVLGRTG--ITRLRGRWAEAW----GRPVMPMCHPAYLLRNPEAKREAWA 248

Query: 250 ALITLKKAL 258
            L+ LK  L
Sbjct: 249 DLLELKARL 257


>gi|218532502|ref|YP_002423318.1| phage SPO1 DNA polymerase-related protein [Methylobacterium
           chloromethanicum CM4]
 gi|218524805|gb|ACK85390.1| phage SPO1 DNA polymerase-related protein [Methylobacterium
           chloromethanicum CM4]
          Length = 334

 Score =  194 bits (494), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 80/329 (24%), Positives = 129/329 (39%), Gaps = 71/329 (21%)

Query: 1   MTSKRILSQE--QILTIALFYADSGVYWVFDE-PNNEATYE------------------- 38
           MT+    +     +++   F+  +GV  V DE P++                        
Sbjct: 1   MTANHADTDARGDLISYLDFHVAAGVDAVLDEQPHDRFAEAESVRADAASQAEPATRREP 60

Query: 39  -------------------------SQRKEKSIDSAIQPI----TNIRHIHSPLVQQADS 69
                                    S+  ++   SA +P       +    +P  +   +
Sbjct: 61  LESRREPLEPRREPLPPRREALEPRSEPPQRDAPSAEEPPLAFRRELPSRDAPAREPPRT 120

Query: 70  IAQKA------------------CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLM 111
               A                   +L EL+ LLR F  C L  T+ + + A       +M
Sbjct: 121 YGNAAGAKPGEAADDARARAAQMKTLDELEELLRGFEGCGLRFTAKNLVFADGNPQARVM 180

Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEM 171
            +G  P   ++  GKPF G++G +LD+M+ +I + RT  +IS + PW PPGNRN +  E+
Sbjct: 181 FVGEAPGADEDRIGKPFMGRSGQLLDRMMAAIGLDRTSAYISNVVPWRPPGNRNPTPQEI 240

Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP-HSIIPTLA 230
            ICRP + RQIEL +P IL+ +G                +  G++          I  LA
Sbjct: 241 SICRPFVERQIELANPDILVCLGAPATQTLTGTK-DGILKARGRFYPYRLGDGREIRALA 299

Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALK 259
           T+HP  L++ P+ K+  W     LK AL 
Sbjct: 300 TLHPAYLLRQPVQKRLAWRDFRMLKSALD 328


>gi|251772271|gb|EES52841.1| Uracil-DNA glycosylase, family 4 [Leptospirillum ferrodiazotrophum]
          Length = 251

 Score =  194 bits (493), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 59/259 (22%), Positives = 101/259 (38%), Gaps = 14/259 (5%)

Query: 1   MTSKRILS-QEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHI 59
           M     L   E +     +  ++        P+ E         + + S + P       
Sbjct: 1   MKEGHPLDGPEGLAVYLRYLQETVPDLALPRPSAETGEIRMAGGERVGSPLSPS------ 54

Query: 60  HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSD 119
                  A S   ++ SL  L  ++     C L ST    +         LM +G  P  
Sbjct: 55  -----LSAGSSPGESGSLESLAKVVSECRLCVLSSTRTFAVFGEGNPDARLMFVGEGPGA 109

Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIM 179
            ++ SG+PF G+ G +L +M+ ++   R  ++I+ +    PPGNR     E   C P + 
Sbjct: 110 DEDASGRPFVGRAGELLTRMIGAMGYRREDVYIANVVKCRPPGNRVPEESERASCLPYLK 169

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
           RQI LISPK ++ +G        + + +   +  G+ ++L      I  + T HP  L++
Sbjct: 170 RQIGLISPKAMVLLGQTAAVSLLSRN-EGISRLRGRETSLP-EFPGIRVMPTYHPAYLLR 227

Query: 240 YPLIKKNTWHALITLKKAL 258
            P  K   W  L  +   L
Sbjct: 228 NPAAKAQVWEDLQQVMGWL 246


>gi|77919605|ref|YP_357420.1| phage SpO1 DNA polymerase-like protein [Pelobacter carbinolicus DSM
           2380]
 gi|77545688|gb|ABA89250.1| phage SpO1 DNA polymerase-related protein [Pelobacter carbinolicus
           DSM 2380]
          Length = 224

 Score =  194 bits (493), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 49/216 (22%), Positives = 91/216 (42%), Gaps = 7/216 (3%)

Query: 45  SIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQ 104
              S    +       +     +    Q+A  L E+++ L     C L       +    
Sbjct: 13  PWPSDADVLPVCPLPSAADGDTSKPCRQEA--LEEVRADLGDCRRCALSKKRKHIVFGGG 70

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            E   L+ +G  P   ++  G PF G+ G +LD+ML ++ + R +++I  +    PPGNR
Sbjct: 71  NEKARLVFVGEAPGRDEDEQGIPFVGEAGRLLDRMLFAMGLDRDEVYICNVQKCRPPGNR 130

Query: 165 NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS 224
           +    E+E C P + RQ+  I P++++ +G          + +   +  G W        
Sbjct: 131 DPLPEEIEACEPFLRRQLAAIRPRVIVTLGRFAAQTLL-REREAISRLRGHWHAYE---- 185

Query: 225 IIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            +P + T HP  L++ P  K+  W  L  +   L++
Sbjct: 186 GVPLMPTYHPAYLLRNPASKREVWEDLKQVMGRLRD 221


>gi|121997486|ref|YP_001002273.1| phage SPO1 DNA polymerase-like protein [Halorhodospira halophila
           SL1]
 gi|121588891|gb|ABM61471.1| phage SPO1 DNA polymerase-related protein [Halorhodospira halophila
           SL1]
          Length = 294

 Score =  194 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 52/220 (23%), Positives = 83/220 (37%), Gaps = 5/220 (2%)

Query: 43  EKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICA 102
                      T            A     +      L++ +   H C LC     T+  
Sbjct: 78  SAGGAEPASAPTTAPEPGGAPQAAAPEAGCEDLDWDALEARVAGCHACKLCEGRTQTVFG 137

Query: 103 TQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS--IEIMRTQIHISMISPWHP 160
                 DL+IIG  P   ++  G+PF G+ G +LD ML +      R  ++I  I    P
Sbjct: 138 VGDRQADLVIIGEGPGAEEDRQGEPFVGRAGQLLDAMLAAIDRGRDRGGVYIGNIVKCRP 197

Query: 161 PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220
           PGNR+    E+  C P + RQ+EL+ PK ++ +G                +  G+  +  
Sbjct: 198 PGNRDPRPDEVAACTPYLRRQLELLEPKAIVALGRVAAQQLL-ETKSPLAKLRGRVHHY- 255

Query: 221 TPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
                IP   T HP  L++ P  K   W  L  ++  ++ 
Sbjct: 256 -GAQSIPVWVTYHPAYLLRSPGEKAKVWQDLKRIRGLVEE 294


>gi|194289838|ref|YP_002005745.1| uracil-DNA glycosylase,phage-related protein [Cupriavidus
           taiwanensis LMG 19424]
 gi|193223673|emb|CAQ69680.1| putative uracil-DNA glycosylase,phage-related protein [Cupriavidus
           taiwanensis LMG 19424]
          Length = 289

 Score =  193 bits (491), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 93/224 (41%), Gaps = 6/224 (2%)

Query: 34  EATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLC 93
           EA  ++   + + D  + P        +  VQ     A        L + +     C LC
Sbjct: 62  EALPDAAVAQPAADEQVAPEPVPAGPGAADVQGEREAAIATMDWPALDAAVAGCTACGLC 121

Query: 94  STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHI 152
            T  +T+        + M++G  P +++++ G+PF G+ G +LD ML ++ + R   + I
Sbjct: 122 RTRTNTVFGVGARQAEWMLVGEAPGENEDLQGEPFVGQAGKLLDNMLGALGLARGRNVFI 181

Query: 153 SMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN 212
           + +    PPGNRN    E+  C P + RQI L+ P++++ +G                + 
Sbjct: 182 ANVLKCRPPGNRNPEPEEVAQCEPFLRRQIALVRPRVIVVLGRFAAQSLL-RTTTPIGKL 240

Query: 213 LGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
            G           IP + T HP  L++    K   W  L   ++
Sbjct: 241 RGTVHVYE----GIPVVVTYHPAYLLRTLTDKARAWEDLCLARE 280


>gi|115378583|ref|ZP_01465737.1| phage SPO1 DNA polymerase domain protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|310822001|ref|YP_003954359.1| phage spo1 DNA polymerase domain-containing protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|115364411|gb|EAU63492.1| phage SPO1 DNA polymerase domain protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309395073|gb|ADO72532.1| Phage SPO1 DNA polymerase domain protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 323

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 5/201 (2%)

Query: 56  IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115
            +            +  +  +L +++  L     C LC+   + +        DL+ +G 
Sbjct: 118 PQQAPRYPGPLPGVVEGERPTLDQIRRELGDCRRCKLCTGRKNIVFGVGNPRADLVFVGE 177

Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICR 175
            P ++++I G PF G  G +L KM+Q++   R +I+I  +    PPGNRN    E+  C 
Sbjct: 178 GPGENEDIQGVPFVGAAGELLTKMIQAMGFSRDEIYICNVVKCRPPGNRNPEADEIAACE 237

Query: 176 PIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
           P +  Q+  I PK+++ +G          D     +  G+W         +  + T HP 
Sbjct: 238 PFLRSQLLAIQPKVIVALGKFAAQTLL-RDTTPITRLRGQWREYQ----GVKLMPTFHPA 292

Query: 236 ELIQYPLIKKNTWHALITLKK 256
            L++ P  K+  W  L  + K
Sbjct: 293 YLLRSPAEKRKAWEDLQQVMK 313


>gi|322436205|ref|YP_004218417.1| phage SPO1 DNA polymerase-related protein [Acidobacterium sp.
           MP5ACTX9]
 gi|321163932|gb|ADW69637.1| phage SPO1 DNA polymerase-related protein [Acidobacterium sp.
           MP5ACTX9]
          Length = 290

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 52/289 (17%), Positives = 105/289 (36%), Gaps = 36/289 (12%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKE-----KSIDSAIQPITN 55
           M  ++     ++     ++ D GVY  +     +A   +  +      +S+ +       
Sbjct: 1   MAVEKQAGHAEVRAYLEYFRDMGVYDFYRNGEPQAIEAATMEAVVERVESVRATPVAPVV 60

Query: 56  IRHIHSPLVQQADSIA-----QKACSLHEL--------------------KSLLRSFHDC 90
                 P V    + A      K  S  +L                    ++ +     C
Sbjct: 61  AVVETGPSVPATQAAAVGFDIAKPVSFDDLAPLPEVRVAAGDRAAALAVIRADIGDCTRC 120

Query: 91  HL-CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQ 149
            L      + +         LM +G  P   ++  G PF GK+G +L+ M+ ++ + R Q
Sbjct: 121 PLAYGGRRNIVFGDGDAKARLMFVGEGPGADEDEQGLPFVGKSGQLLNNMIGAMGLSREQ 180

Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209
           ++I+ I    PP NR    +E   C   ++RQ++++ P+ ++ +G     +         
Sbjct: 181 VYIANIVKCRPPANRAPEPVEANTCTQFLVRQMDVVQPEYVVALGATAATYLLGVKQSLA 240

Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
               G+W ++         + T HP  L++ P  K   W  L  +  A+
Sbjct: 241 S-LRGRWHDV----RGAKAVVTYHPAFLLRDPRQKGEAWKDLQMVMAAM 284


>gi|167619562|ref|ZP_02388193.1| putative phage-related DNA polymerase [Burkholderia thailandensis
           Bt4]
          Length = 263

 Score =  193 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 6/211 (2%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
           +P              A + +       EL++ +     C LC    +T+     E  D 
Sbjct: 50  EPGVEPAPPDVAAEPAARAPSVAELGWDELRARVADCERCRLCEKRTNTVFGVGDERADW 109

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169
           M++G  P ++++  G+PF G+ G +LD ML+++ + R   ++I+ +    PPGNRN    
Sbjct: 110 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 169

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E+  C P + RQ+ L+ PK+++ +G          D        G+          +P +
Sbjct: 170 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHEYE----GVPVI 224

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            T HP  L++    K   W  L       ++
Sbjct: 225 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 255


>gi|297184210|gb|ADI20328.1| uracil-DNA glycosylase [uncultured alpha proteobacterium
           EB080_L27A02]
          Length = 264

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 64/261 (24%), Positives = 121/261 (46%), Gaps = 18/261 (6%)

Query: 11  QILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSA-----IQPITNIRHIHSPLV 64
              +   +  + GV     D P N    ++   +  I +      +  + ++        
Sbjct: 9   DAKSALEWQYEIGVDETISDLPINRYEIQNIPPKLKISAKSNIAHVAVMPDMLSSKETAS 68

Query: 65  QQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNIS 124
             A  +A+K  +L EL+  +  F  C L   +   + +       +M+IG +PS  ++I 
Sbjct: 69  SVAKMLAEKCNNLSELRDAMGLFEMCSLKKGAKKLVFSDGLSKSRVMVIGESPSREEDIE 128

Query: 125 GKPFSGKTGNMLDKMLQSIEIMRTQI------HISMISPWHPPGNRNLSNIEMEICRPII 178
           GKPF G  G ++DKM Q+I + R         +I+   PW PP +R+ ++ E+ +  P +
Sbjct: 129 GKPFVGTEGELVDKMFQAIGLSRDSNEPNEAIYITTAIPWRPPQSRDPNSDEIAMMLPFL 188

Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238
            R IEL++P  ++ +GN   +   N       +  G+W+           L  +HP+ L+
Sbjct: 189 KRHIELVNPDFIVLMGNIACSAVLNKVGIN--KFRGEWTEAFGK----QILPMLHPRSLL 242

Query: 239 QYPLIKKNTWHALITLKKALK 259
           + P+ K++TW+ L++LK+ LK
Sbjct: 243 KDPMRKRDTWNDLLSLKERLK 263


>gi|291287466|ref|YP_003504282.1| phage SPO1 DNA polymerase-related protein [Denitrovibrio
           acetiphilus DSM 12809]
 gi|290884626|gb|ADD68326.1| phage SPO1 DNA polymerase-related protein [Denitrovibrio
           acetiphilus DSM 12809]
          Length = 210

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 6/191 (3%)

Query: 67  ADSIAQKACS-LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISG 125
           A    QK  +    L   + +   C L  T L+ +        DLM +G  P   ++  G
Sbjct: 20  AQECEQKPENPFEALYKEVSTCKKCRLHETRLNIVFGVGDPAADLMFVGEGPGAEEDKQG 79

Query: 126 KPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELI 185
            PF G+ G +L KM++++   R  ++I+ I    PP NRN    E   C P + RQIE +
Sbjct: 80  IPFVGRAGQLLTKMIEAMGFTRDTVYIANIVKCRPPENRNPFEDESNTCIPYLYRQIEYV 139

Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK 245
            PK+++ +G+     F         +  G++  L      +  + T HP  L++ P +KK
Sbjct: 140 KPKVIVCLGSVAAQNFLKTKL-GITKIRGEFVELN----GVKVMPTYHPAYLLRNPKMKK 194

Query: 246 NTWHALITLKK 256
             W  L  +  
Sbjct: 195 PCWEDLQKVMA 205


>gi|291279806|ref|YP_003496641.1| uracil-DNA glycosylase [Deferribacter desulfuricans SSM1]
 gi|290754508|dbj|BAI80885.1| uracil-DNA glycosylase [Deferribacter desulfuricans SSM1]
          Length = 207

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 5/177 (2%)

Query: 82  SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
           + ++  + C L     + +        +LM +G  P   ++  G+PF G+ G +L KM++
Sbjct: 33  NEVKDCNKCRLAKNRTNLVFGEGDPNAELMFVGEGPGAEEDKQGRPFVGRAGQLLTKMIE 92

Query: 142 SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
           ++++ R  ++I+ I    PP NR   N E+  C P + +QIE+I PK ++ +G+   +  
Sbjct: 93  AMKLKREDVYIANIVKCRPPNNRAPLNDEIGACIPYLHKQIEIIKPKYIICLGSIAASAL 152

Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
            N       +  G +         I  + T HP  L++ P +KK  W  L  + K +
Sbjct: 153 LN-TTTAISKIRGSFREF----KGIKVMPTFHPAYLLRNPKMKKLAWEDLQLVMKEM 204


>gi|114771330|ref|ZP_01448750.1| hypothetical protein OM2255_08235 [alpha proteobacterium HTCC2255]
 gi|114548255|gb|EAU51142.1| hypothetical protein OM2255_08235 [alpha proteobacterium HTCC2255]
          Length = 264

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 64/261 (24%), Positives = 121/261 (46%), Gaps = 18/261 (6%)

Query: 11  QILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSA-----IQPITNIRHIHSPLV 64
              +   +  + GV     D P N    ++   +  I +      +  + ++        
Sbjct: 9   DAKSALEWQYEIGVDETISDLPINRYEIQNIPPKLKISAKSNIAHVAVMPDMLSSKETAS 68

Query: 65  QQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNIS 124
             A  +A+K  +L EL+  +  F  C L   +   + +       +M+IG +PS  ++I 
Sbjct: 69  SVAKMLAEKCNNLSELRDAMGLFEMCSLKKGAKKLVFSDGLSKSRVMVIGESPSREEDIE 128

Query: 125 GKPFSGKTGNMLDKMLQSIEIMRTQI------HISMISPWHPPGNRNLSNIEMEICRPII 178
           GKPF G  G ++DKM Q+I + R         +I+   PW PP +R+ ++ E+ +  P +
Sbjct: 129 GKPFVGTEGELVDKMFQAIGLSRDSNEPNEAIYITTAIPWRPPQSRDPNSDEIAMMLPFL 188

Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238
            R IEL++P  ++ +GN   +   N       +  G+W+           L  +HP+ L+
Sbjct: 189 KRHIELVNPDFIVLMGNIACSAVLNKVGIN--KFRGEWTEAFGK----QILPMLHPRSLL 242

Query: 239 QYPLIKKNTWHALITLKKALK 259
           + P+ K++TW+ L++LK+ LK
Sbjct: 243 KDPIRKRDTWNDLLSLKERLK 263


>gi|83721489|ref|YP_442527.1| phage SPO1 DNA polymerase domain-containing protein [Burkholderia
           thailandensis E264]
 gi|257138735|ref|ZP_05586997.1| phage SPO1 DNA polymerase domain-containing protein [Burkholderia
           thailandensis E264]
 gi|83655314|gb|ABC39377.1| phage SPO1 DNA polymerase domain protein [Burkholderia
           thailandensis E264]
          Length = 433

 Score =  192 bits (487), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 6/211 (2%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
           +P              A + +       EL++ +     C LC    +T+     E  D 
Sbjct: 220 EPGVEPAPPDVAAEPAARAPSVAELGWDELRARVADCERCRLCEKRTNTVFGVGDERADW 279

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169
           M++G  P ++++  G+PF G+ G +LD ML+++ + R   ++I+ +    PPGNRN    
Sbjct: 280 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 339

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E+  C P + RQ+ L+ PK+++ +G          D        G+          +P +
Sbjct: 340 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHEYE----GVPVI 394

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            T HP  L++    K   W  L       ++
Sbjct: 395 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 425


>gi|153004366|ref|YP_001378691.1| phage SPO1 DNA polymerase-like protein [Anaeromyxobacter sp.
           Fw109-5]
 gi|152027939|gb|ABS25707.1| phage SPO1 DNA polymerase-related protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 255

 Score =  192 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 92/228 (40%), Gaps = 5/228 (2%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P       +    +    A+     +     P           + +L  L+  L     C
Sbjct: 26  PARGGAPAAGPSAERAAPALATPARVGPDAPPGGYTTADKGCGSPALLGLRGELGECTRC 85

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150
            L  T    +    +   +LM +G  P   ++  G+PF GK G +L KM++++   R  +
Sbjct: 86  KLAGTRTHVVFGVGSPAAELMFVGEGPGADEDQQGEPFVGKAGQLLTKMIEAMGFRREDV 145

Query: 151 HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210
           +I+ +    PPGNRN    E+  C P +  QI  ISPK+++ +G          D     
Sbjct: 146 YIANVVKCRPPGNRNPEPDELAACEPFLRAQIAAISPKVIVALGKFAAQTLL-RDTTPIS 204

Query: 211 QNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
           +  G+WS+       +  + T HP  L++ P  KK  W  L  + K L
Sbjct: 205 KLRGRWSSYE----GVKLMPTFHPAYLLRSPEEKKKAWEDLQLVMKEL 248


>gi|95929443|ref|ZP_01312186.1| phage SPO1 DNA polymerase-related protein [Desulfuromonas
           acetoxidans DSM 684]
 gi|95134559|gb|EAT16215.1| phage SPO1 DNA polymerase-related protein [Desulfuromonas
           acetoxidans DSM 684]
          Length = 243

 Score =  192 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 82/188 (43%), Gaps = 5/188 (2%)

Query: 73  KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
           +  SL E++  L     C L     S +  +     +L+ +G  P   ++  G PF G+ 
Sbjct: 57  RPPSLEEIRQELGDCQRCGLAQGRKSIVFGSGNPHAELVFVGEGPGRDEDEQGVPFVGEA 116

Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192
           G +L+++L ++ + R Q++I  +    PP NRN    E+  C P + +Q+  + P++++ 
Sbjct: 117 GRLLERILFAMGLDREQVYICNVVKCRPPQNRNPQPDEIAACEPFLKQQLASLKPRVIVA 176

Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
           +G                +  G W+        I  + T HP  L++ P  K++ W  + 
Sbjct: 177 LGKFAAQTLLQQQT-PISRLRGNWAAYQ----GIALMPTYHPAYLLRNPAGKRDVWEDMK 231

Query: 253 TLKKALKN 260
            +   L  
Sbjct: 232 AVMSRLAQ 239


>gi|258593155|emb|CBE69469.1| protein of unknown function [NC10 bacterium 'Dutch sediment']
          Length = 244

 Score =  192 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 43/200 (21%), Positives = 90/200 (45%), Gaps = 5/200 (2%)

Query: 62  PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121
              ++A+ + + + +L +++  +     C L       +         L+ +G  P   +
Sbjct: 37  AWPERAEGLPEPSPTLTKVRETVGECTRCKLHKDRKHIVFGIGNPKAWLVFVGEAPGADE 96

Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ 181
           +  G+PF G+ G +L ++++++++ R Q++I  I    PP NRN    E+  C P ++ Q
Sbjct: 97  DEQGEPFVGRAGQLLTRIIEAMKLTREQVYICNIVKCRPPANRNPEPDEIAACEPFLVAQ 156

Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241
           ++ I PK++  +G            +   +  G++ +       I  L T HP  L++ P
Sbjct: 157 LQAIRPKLICALGTFAAQTLL-RTREPISKLRGRFHDY----HGILVLPTFHPAYLLRNP 211

Query: 242 LIKKNTWHALITLKKALKNL 261
             KK  W  +  L +  + L
Sbjct: 212 HEKKTVWEDMKLLMREYEQL 231


>gi|293603947|ref|ZP_06686361.1| family 4 uracil-DNA glycosylase [Achromobacter piechaudii ATCC
           43553]
 gi|292817640|gb|EFF76707.1| family 4 uracil-DNA glycosylase [Achromobacter piechaudii ATCC
           43553]
          Length = 329

 Score =  192 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 5/219 (2%)

Query: 37  YESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTS 96
                +       +        + +P +  A+++     +L EL+  + +   C LC   
Sbjct: 109 ASILNRTGPPPRPVPKTAEEEAVEAPRIPVAEAVKNA--NLDELREQVVACTACGLCQGR 166

Query: 97  LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMI 155
              +          +++G  P + ++  G PF G++G +LD ML ++ + R     I+ +
Sbjct: 167 RHAVFGHGATPTRWLVVGEAPGEQEDRQGHPFVGRSGQLLDAMLAAVGMSRDTDVFITNV 226

Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK 215
               PPGNRN    E+  C P +MRQI L+ P+ +L +G          DA       G+
Sbjct: 227 IKCRPPGNRNPKPEEIASCSPYLMRQIALLKPERILVLGRFAAQTLLGTDATIGS-LRGR 285

Query: 216 WSNLCTPHSI-IPTLATVHPQELIQYPLIKKNTWHALIT 253
              L T     IP + + HP  L++ P  K   W  L  
Sbjct: 286 VHTLKTEDGSEIPLIVSYHPAYLLRSPSEKARAWQDLKL 324


>gi|239948113|ref|ZP_04699866.1| uracil-DNA glycosylase, family 4 [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239922389|gb|EER22413.1| uracil-DNA glycosylase, family 4 [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 304

 Score =  191 bits (486), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 59/202 (29%), Positives = 103/202 (50%), Gaps = 4/202 (1%)

Query: 62  PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121
             +  A S+A KA ++ ELK  L +F+ C L   + +T+         +M+IG  P   +
Sbjct: 99  DNITLARSLADKANNIEELKESLLNFNGCELKKFATNTVFGDGNLEAKIMLIGEAPGSIE 158

Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMR 180
           ++ G PF G++GN+LD ML +I I R    +I+    W PP NR  +  E++ICRP + +
Sbjct: 159 DLKGIPFCGESGNLLDNMLHAIGISRKNNAYITNTVFWRPPANRQPTLEEVDICRPFVEK 218

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT--LATVHPQELI 238
            I LI+PK+++ +G+               +   ++      +   P    A  HP  L+
Sbjct: 219 HIALINPKLIILVGSTAATSLLG-KNSGITKIRQEYYFYTNKYLSAPIQTTAIFHPAYLL 277

Query: 239 QYPLIKKNTWHALITLKKALKN 260
           + P+ K+ +W+ L+ +K+ L N
Sbjct: 278 RQPMQKRTSWYDLLKIKEYLVN 299


>gi|84515828|ref|ZP_01003189.1| hypothetical protein SKA53_14301 [Loktanella vestfoldensis SKA53]
 gi|84510270|gb|EAQ06726.1| hypothetical protein SKA53_14301 [Loktanella vestfoldensis SKA53]
          Length = 257

 Score =  191 bits (486), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 64/253 (25%), Positives = 107/253 (42%), Gaps = 15/253 (5%)

Query: 14  TIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQ 72
               +  + GV   + D P +    +      +  + + P    R +    V  A + A 
Sbjct: 12  AALEWQVELGVTDAILDAPVDRYALDPVPVRAAPVADVPPPAIAREL--DPVAIARAAAA 69

Query: 73  KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
            A  L  L + + +F  C +   + + + A    G  +MI+G  P   ++ +GKPF G+ 
Sbjct: 70  AAPDLPALAAAMAAFEHCEIKRGARNAVFADGQPGARVMIVGEAPGREEDRAGKPFVGQA 129

Query: 133 GNMLDKMLQSIEIMRTQI------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186
           G MLD+ML +I++ R         +I+ + PW PP NR     E+ +  P + R I L  
Sbjct: 130 GQMLDRMLAAIDLGRAHENTDRAVYITNVMPWRPPSNRTPDADEIAMMLPFLERHIALAD 189

Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKN 246
           P+I++ +GN                  G W+ +       P L   HP  L++ P  K+ 
Sbjct: 190 PQIIVLMGNTPCQALLGQTG--ITALRGTWTEVLGK----PCLPMFHPAYLLRNPAAKRE 243

Query: 247 TWHALITLKKALK 259
            W  L+TL   LK
Sbjct: 244 AWADLLTLNARLK 256


>gi|281358066|ref|ZP_06244550.1| phage SPO1 DNA polymerase-related protein [Victivallis vadensis
           ATCC BAA-548]
 gi|281315439|gb|EFA99468.1| phage SPO1 DNA polymerase-related protein [Victivallis vadensis
           ATCC BAA-548]
          Length = 292

 Score =  191 bits (486), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 53/180 (29%), Positives = 82/180 (45%), Gaps = 5/180 (2%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L EL+ L  +  +C L     + +         LM IG  P   +++ G+PF G  G +L
Sbjct: 106 LDELRQLALACRNCPLAQGRHTVVFGEGNPEARLMFIGEGPGYQEDMQGRPFVGPAGQLL 165

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            KM+Q+++  R +++I+ I    PP NRN    E   C   + RQIEL+ P+ ++ +G  
Sbjct: 166 TKMIQAMQFTREEVYIANIVKCRPPNNRNPEPDEAFACIGYLKRQIELVQPEAIVLLGAV 225

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
              F          +  GKW         IP + T HP  L++ P  KK  W  L  + K
Sbjct: 226 AVRFLLERPGGIM-RLRGKWLGYN----GIPVMPTFHPSYLLRDPSGKKLAWADLQMVMK 280


>gi|225872285|ref|YP_002753740.1| uracil-DNA glycosylase, family 4 [Acidobacterium capsulatum ATCC
           51196]
 gi|225793303|gb|ACO33393.1| uracil-DNA glycosylase, family 4 [Acidobacterium capsulatum ATCC
           51196]
          Length = 301

 Score =  191 bits (486), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 52/278 (18%), Positives = 98/278 (35%), Gaps = 34/278 (12%)

Query: 10  EQILTIALFYADSGVYWVFDE---------PNNEATYESQRKEKSIDSAIQPITNIRHIH 60
             +     +Y D GVY V+                +  +   +   +S  QP  +     
Sbjct: 11  ASLQARLRYYRDLGVYDVYRRGEPLAPAELAALLPSVAAPSPQPDPESTPQPAVSASPSV 70

Query: 61  S-------------------PLVQQADSIAQKACSLHELKSLLRSFHDCHLC-STSLSTI 100
           +                   P        AQ+  +L  L+  +     C L        +
Sbjct: 71  TVTRTEREEPALPPTVPHFMPSDSPIVPAAQRPEALRVLREEIGDCTRCQLAFEGRHKIV 130

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160
                    LM +G  P   ++  G PF G+ G +L+ M+ ++ + R+Q++I+ I    P
Sbjct: 131 FGDGDPSARLMFVGEGPGADEDAQGLPFVGRAGQLLNNMIGAMGLERSQVYIANIVKCRP 190

Query: 161 PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220
           P NR     E   C   + RQ++++ P++++ +G+    +     +       G+     
Sbjct: 191 PQNRVPEPDEANTCTQFLFRQMQIVRPEMIVALGSTAATYLLGAKSPLKA-LRGRIHQA- 248

Query: 221 TPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
                   + T HP  L++ P  KK  W  L    + L
Sbjct: 249 ---HGSKLIVTYHPAYLLRDPNQKKEAWADLQIAMREL 283


>gi|317401956|gb|EFV82558.1| uracil-DNA glycosylase, family 4 [Achromobacter xylosoxidans C54]
          Length = 192

 Score =  191 bits (485), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 53/190 (27%), Positives = 88/190 (46%), Gaps = 3/190 (1%)

Query: 71  AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130
           A K  +L EL+  + +   C LCS     +     +    +++G  P + ++  G+PF G
Sbjct: 4   AVKNANLDELREQVVACTACGLCSGRRHAVFGHGGQPTRWLVVGEAPGEQEDRQGQPFVG 63

Query: 131 KTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189
           ++G +LD ML ++ + R +   I+ +    PPGNRN    E+  C P +MRQI L+ P+ 
Sbjct: 64  RSGQLLDSMLSAVGMSRERDVFIANVIKCRPPGNRNPKPEEIAACSPYLMRQIALLKPER 123

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP-HSIIPTLATVHPQELIQYPLIKKNTW 248
           +L +G          DA       G+   + T     IP + + HP  L++ P  K   W
Sbjct: 124 ILVLGRFAAQTLLGTDATIGS-LRGRVHQMKTEEGREIPVIVSYHPAYLLRSPAEKARAW 182

Query: 249 HALITLKKAL 258
             L    + L
Sbjct: 183 QDLKLAARQL 192


>gi|167581451|ref|ZP_02374325.1| phage SPO1 DNA polymerase domain protein [Burkholderia
           thailandensis TXDOH]
          Length = 237

 Score =  191 bits (485), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 6/211 (2%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
           +P              A + +       EL++ +     C LC    +T+     E  D 
Sbjct: 24  EPGFEPAPPDVAAEPAARAPSVAELGWDELRARVADCERCRLCEKRTNTVFGVGDERADW 83

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169
           M++G  P ++++  G+PF G+ G +LD ML+++ + R   ++I+ +    PPGNRN    
Sbjct: 84  MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 143

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E+  C P + RQ+ L+ PK+++ +G          D        G+          +P +
Sbjct: 144 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHEYE----GVPVI 198

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            T HP  L++    K   W  L       ++
Sbjct: 199 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 229


>gi|241662909|ref|YP_002981269.1| phage SPO1 DNA polymerase-like protein [Ralstonia pickettii 12D]
 gi|309782169|ref|ZP_07676899.1| arginine biosynthesis protein ArgJ [Ralstonia sp. 5_7_47FAA]
 gi|240864936|gb|ACS62597.1| phage SPO1 DNA polymerase-related protein [Ralstonia pickettii 12D]
 gi|308919235|gb|EFP64902.1| arginine biosynthesis protein ArgJ [Ralstonia sp. 5_7_47FAA]
          Length = 264

 Score =  191 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 8/238 (3%)

Query: 24  VYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSL 83
           V     EP                        +  +      +A  IA  A    +L++ 
Sbjct: 30  VEVAAAEPVAVEVEADSFVAAESVPVRGEPPVMHALSDTAAPRAQRIA--AFDWAQLEAA 87

Query: 84  LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143
           + +   C LC    +T+        + M+IG  P + ++  G+PF G+ G +LD ML+SI
Sbjct: 88  VSNCTSCKLCERRTNTVFGVGDREAEWMLIGEAPGEQEDKQGEPFVGQAGKLLDSMLRSI 147

Query: 144 EIMRTQ-IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202
            + R + + I+ +    PPGNR+    E  +C P + RQI L+ P+I++ +G        
Sbjct: 148 GLSREKGVFIANVLKCRPPGNRDPEPDEAAMCDPYLKRQIALVKPRIIVVLGRIAAQNLL 207

Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
                   +  GK   +      +P + T HP  L++    K   W  L   +K    
Sbjct: 208 Q-TQTPVGKLRGKVHEVE----GVPVVVTYHPAYLLRTLTDKARAWEDLCLARKIYAE 260


>gi|260893068|ref|YP_003239165.1| phage SPO1 DNA polymerase-related protein [Ammonifex degensii KC4]
 gi|260865209|gb|ACX52315.1| phage SPO1 DNA polymerase-related protein [Ammonifex degensii KC4]
          Length = 210

 Score =  191 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 4/185 (2%)

Query: 74  ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
             +L EL++++++   C L +   + +         LM IG  P   ++  G+PF G  G
Sbjct: 22  PQTLEELEAVVKNCRKCPLAAGRTNVVFGEGNPHALLMFIGEGPGAEEDRQGRPFVGPAG 81

Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
            +LD++L +  I R +++I+ I    PPGNR  +  E E C P + RQIELI PKI++ +
Sbjct: 82  QLLDRILAACGIKREEVYIANIVKCRPPGNRVPTKEEAEACLPYLRRQIELIRPKIIVLL 141

Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253
           G     +       +  +  G+W     P      + T HP  L++    K+  W     
Sbjct: 142 GATALQYLVG-SGARITKIRGQWL---GPLYGAQIMPTYHPAALLRDASKKRPAWEDFKK 197

Query: 254 LKKAL 258
           ++ A 
Sbjct: 198 VRDAY 202


>gi|71907612|ref|YP_285199.1| Phage SPO1 DNA polymerase-related protein [Dechloromonas aromatica
           RCB]
 gi|71847233|gb|AAZ46729.1| Phage SPO1 DNA polymerase-related protein [Dechloromonas aromatica
           RCB]
          Length = 260

 Score =  191 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 66/261 (25%), Positives = 105/261 (40%), Gaps = 18/261 (6%)

Query: 7   LSQEQILTIALFYADSGVY--WVFD--EPNNEATYESQRKEKSIDSAIQPITNIRHIHSP 62
           LS+EQ+L       + G+   WV     P   A   S + E    +  Q           
Sbjct: 3   LSREQMLA------EMGISPIWVLRDVAPPASAIESSPQMEAEAVTPPQVAEVPSAPIPA 56

Query: 63  LVQQADSIAQKACSLH--ELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120
                 S A    +L    L   +     C LC      +        + + IG  P   
Sbjct: 57  QTPPPRSTAAAVDTLDWPALARQVAECRACSLCEQRKQAVLGVGDTNPEWLFIGEGPGAE 116

Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIM 179
           +++ G+PF G+ G +LD ML S++I R  +++I+      PPGNR     EM  C P + 
Sbjct: 117 EDVKGEPFVGQAGKLLDNMLASLDIARGNRVYIANAVKCRPPGNRTPDAAEMAACWPYLE 176

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
           RQI L+ PK+++ +G    +   ++D        GK   L      IP + T HP  L++
Sbjct: 177 RQIALLKPKVIVLLGKAAVHAVLHDDKSLAS-LRGKRFELA----GIPVVVTYHPAYLLR 231

Query: 240 YPLIKKNTWHALITLKKALKN 260
               K   W  L+  ++ L+ 
Sbjct: 232 NLPDKAKAWEDLLFARRTLRE 252


>gi|149174697|ref|ZP_01853322.1| DNA polymerase, bacteriophage-type [Planctomyces maris DSM 8797]
 gi|148846391|gb|EDL60729.1| DNA polymerase, bacteriophage-type [Planctomyces maris DSM 8797]
          Length = 295

 Score =  191 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 58/281 (20%), Positives = 104/281 (37%), Gaps = 38/281 (13%)

Query: 4   KRILSQEQILTIALFYADSGV--------------------YWVFDEPNNEATYESQRKE 43
            +  SQ  +  +   +  SGV                        ++P       +    
Sbjct: 5   AKTRSQRAVRQLLESWQRSGVTYLRQMEPLPELPAETTSPVEAPQEKPVQTVAPTTPLPR 64

Query: 44  KSIDSAIQPITNIRHIHSPLVQQADSIA------------QKACSLHELKSLLRSFHDCH 91
           +SI    QP            Q    ++             +   L  L + +     C 
Sbjct: 65  QSIVPPPQPTETSEEPTLESEQARKEMSVPRTTKSKMNKGDRQAELDILATQVSKCTRCP 124

Query: 92  -LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150
            L  T   T+         +M IG  P   ++  G+PF G+ G +LDK++++ ++ R+ I
Sbjct: 125 ELAETRTQTVFGVGNPRAKIMFIGEAPGADEDKQGEPFVGRAGKLLDKIIEACQMKRSDI 184

Query: 151 HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210
           +I+ I    PPGNRN +++E   CR  +  QIE++ P  ++  G+       ++D     
Sbjct: 185 YIANILRCRPPGNRNPTDLEASNCRGYLDAQIEIVDPDYIVCWGSVAAKNLLHSDL-PIG 243

Query: 211 QNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
           +  G +            + T HP  L++ P  KKN W  +
Sbjct: 244 KMRGDFYEY----GRAKVVCTYHPSYLLRNPSAKKNVWEDM 280


>gi|33597880|ref|NP_885523.1| bacteriophage-related DNA polymerase [Bordetella parapertussis
           12822]
 gi|33574309|emb|CAE38642.1| bacteriophage-related DNA polymerase [Bordetella parapertussis]
          Length = 298

 Score =  191 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 55/223 (24%), Positives = 94/223 (42%), Gaps = 3/223 (1%)

Query: 36  TYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCST 95
                R  +   +A Q             + A +       L +L+ L++    C LC  
Sbjct: 76  AASPARAPRPPVAAPQRAEPAAEADGQAARAAVAARAAGADLGQLQQLVQDCTACGLCQG 135

Query: 96  SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISM 154
               +     +    M++G  P + ++  G PF G++G +LD MLQS+ + R +   I+ 
Sbjct: 136 RRHAVFGMGAQPARWMVVGEAPGEQEDRQGLPFVGRSGKLLDAMLQSVGMSRERDVFIAN 195

Query: 155 ISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLG 214
           +    PPGNRN    E+  C P + RQI L++P+ +L +G          +A       G
Sbjct: 196 VIKCRPPGNRNPKPEEIAACSPYLRRQIALLNPERILVLGRFAAQTLLGTEA-TIGNLRG 254

Query: 215 KWSNLCT-PHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
           +  +L T     IP + + HP  L++ P  K   W  L+   +
Sbjct: 255 RVHSLQTDEGRSIPVVVSYHPAYLLRSPAEKARAWQDLLLAAR 297


>gi|307824421|ref|ZP_07654646.1| phage SPO1 DNA polymerase-related protein [Methylobacter
           tundripaludum SV96]
 gi|307734405|gb|EFO05257.1| phage SPO1 DNA polymerase-related protein [Methylobacter
           tundripaludum SV96]
          Length = 228

 Score =  191 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 60/251 (23%), Positives = 105/251 (41%), Gaps = 26/251 (10%)

Query: 11  QILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSI 70
              T   +    G+                          + + + +   +P+    ++ 
Sbjct: 2   DNATRLQYLEAMGIDVWL---------------------PRAVADNQQTSTPVAIAENAR 40

Query: 71  AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130
            +   S   L++ +     C LC T   T+  +  +  D MIIG  P   ++  G PF G
Sbjct: 41  PESTDSWEALQAEVAPCTQCDLCKTRTQTVFGSGNKNADWMIIGEGPGQHEDQQGLPFVG 100

Query: 131 KTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
             G +L +ML++I + R ++ I+ I    PP NR+   IE+E C+P +MRQI L+ PKI+
Sbjct: 101 NAGLLLTEMLRAIGLDREEVFITNIVKCRPPANRDPKPIEIETCKPYLMRQIALLKPKII 160

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
           + +G        + D +   +  GK   L       P +   HP  L++  L K+  W  
Sbjct: 161 VVLGRIAAQALLDTD-EPISKLRGKIHALN----DTPVVVVYHPAYLLRSMLDKRKAWAD 215

Query: 251 LITLKKALKNL 261
           L    + +KN+
Sbjct: 216 LKLALQTVKNI 226


>gi|220935320|ref|YP_002514219.1| phage SPO1 DNA polymerase-related protein [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219996630|gb|ACL73232.1| phage SPO1 DNA polymerase-related protein [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 241

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 94/227 (41%), Gaps = 7/227 (3%)

Query: 34  EATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC-HL 92
           +        +    S   P+          V +  +         EL + + +   C  L
Sbjct: 18  QRWVPRAVPDAPAASGAVPVAYEASQAPAPVVEVSAGDVSQLDWDELAARVAACSRCGEL 77

Query: 93  CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQ-IH 151
            +T   T+        D + IG  P   ++  G+PF G+ G +LD ML ++ + R + ++
Sbjct: 78  AATRTQTVFGVGDRQADWLFIGEAPGAEEDRQGEPFVGRAGQLLDSMLFALGLKRGRGVY 137

Query: 152 ISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQ 211
           I+ I    PPGNR+    E   CR  + RQI+LI P+I++ +G          D     +
Sbjct: 138 IANILKCRPPGNRDPKPEEARACRAYLDRQIDLIQPRIIVALGRIAAQNLLGTD-----E 192

Query: 212 NLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
            LG+       +  IP + T HP  L++ P  K+  W  L   ++ +
Sbjct: 193 PLGRLRGKPLNYRDIPLVITYHPAYLLRQPADKRKAWEDLCLARRVM 239


>gi|53719792|ref|YP_108778.1| putative phage-related DNA polymerase [Burkholderia pseudomallei
           K96243]
 gi|52210206|emb|CAH36185.1| putative phage-related DNA polymerase [Burkholderia pseudomallei
           K96243]
          Length = 284

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
           +P+             A + +       EL++ +     C LC    +T+     E  D 
Sbjct: 71  EPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCERCRLCEKRTNTVFGVGDERADW 130

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169
           M++G  P ++++  G+PF G+ G +LD ML+++ + R   ++I+ +    PPGNRN    
Sbjct: 131 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 190

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E+  C P + RQ+ L+ PK+++ +G          D        G+          +P +
Sbjct: 191 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 245

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            T HP  L++    K   W  L       ++
Sbjct: 246 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 276


>gi|299067423|emb|CBJ38622.1| uracil-DNA glycosylase,phage-related protein [Ralstonia
           solanacearum CMR15]
          Length = 289

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 56/234 (23%), Positives = 94/234 (40%), Gaps = 8/234 (3%)

Query: 28  FDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSF 87
            + P             +  +             P+V +A  IA  A    +L+S +   
Sbjct: 59  IEAPPVAVAEVVSVAMPAAAAVATVADVPIEPIDPVVPRAQRIA--AFDWAQLESAVSGC 116

Query: 88  HDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR 147
             C LC     T+        D M+IG  P + ++  G+PF G+ G +LD ML++I + R
Sbjct: 117 TACKLCERRTQTVFGVGDRQADWMLIGEAPGEQEDRQGEPFVGQAGKLLDSMLRAIGLSR 176

Query: 148 TQ-IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206
              + I+ +    PPGNR+    E+ +C P + RQI LI P++++ +G            
Sbjct: 177 ETGVFIANVLKCRPPGNRDPEPDEVAMCDPYLKRQIALIKPRVIIVLGRFAAQSLLQ-TQ 235

Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
               +  GK   +      +P + T HP  L++    K   W  L   +K    
Sbjct: 236 TPVGKLRGKVHEV----DGVPVVVTYHPAYLLRTLTDKARAWEDLCLARKVYTE 285


>gi|114570739|ref|YP_757419.1| phage SPO1 DNA polymerase-like protein [Maricaulis maris MCS10]
 gi|114341201|gb|ABI66481.1| phage SPO1 DNA polymerase-related protein [Maricaulis maris MCS10]
          Length = 286

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 66/270 (24%), Positives = 111/270 (41%), Gaps = 20/270 (7%)

Query: 8   SQEQILTIALFYADSGV--YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHI------ 59
            ++ +  +  ++AD+G+        P   A   S    +    A                
Sbjct: 12  DEKALQALIAWWADAGIEMDEPIVTPRPAAAPVSPHTTEPRRQAPAEPVRAATPQAARAA 71

Query: 60  ----HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115
                      A S+A KA SL  L+  + +F  C L  T+ +T+ A       +M++G 
Sbjct: 72  GFGDSPATGPGARSVAAKADSLDALREAIEAFEGCALKRTARNTVFARGERAARVMLVGE 131

Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICR 175
            P   ++  G+PF+G++G +LD+M  +I I R Q +I+ +  W PPGNR  +  E+  C 
Sbjct: 132 APGRDEDERGEPFAGQSGRLLDQMFAAIGIERDQAYIAHMLNWRPPGNRAPTQDEIAQCL 191

Query: 176 PIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH-------SIIPT 228
           P I R I L  P IL+  G         +D     +  G+W +            + I  
Sbjct: 192 PFIERHIALKKPDILVLAGELGARALLRSDT-AITRLRGRWVDYVLRDAEGNPTSTSIKA 250

Query: 229 LATVHPQELIQYPLIKKNTWHALITLKKAL 258
           L    P+ L+  P+ K+  W  ++ L   L
Sbjct: 251 LPVFSPRYLLARPVEKRLAWQDMLALADQL 280


>gi|302382435|ref|YP_003818258.1| phage SPO1 DNA polymerase-related protein [Brevundimonas
           subvibrioides ATCC 15264]
 gi|302193063|gb|ADL00635.1| phage SPO1 DNA polymerase-related protein [Brevundimonas
           subvibrioides ATCC 15264]
          Length = 261

 Score =  190 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 57/263 (21%), Positives = 105/263 (39%), Gaps = 8/263 (3%)

Query: 2   TSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60
            + +      I ++  F+ D+GV   F D P +     +   +    +    +  +    
Sbjct: 1   MNAQPRETAAIESLLAFWRDAGVDACFEDAPQDRTIVVAPALKAVTRATASVMPVVDM-- 58

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS-TSLSTICATQTEGQDLMIIGYTPSD 119
                 A  +A  A ++  L++   SF  C L    +   +         +++IG  P  
Sbjct: 59  GDATADARRLANGADTMEALEAAAASFRGCELVGMGARGCVFGRGDPHAPVLVIGEAPGA 118

Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIM 179
            ++ +G+PF G+ G +LDKML +  +   ++ I+    W PPGNR  +  E   C P + 
Sbjct: 119 EEDATGQPFVGQPGKLLDKMLAAAGLA-DKVFITNTVFWRPPGNRTPTPQEQAACAPFVE 177

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT--PHSIIPTLATVHPQEL 237
           R   L+ P+ +L +G                +  G W            P +AT+HP  L
Sbjct: 178 RAFFLMKPRAVLLLGAAAARSVL-RTEDGIMKVRGHWREWRLTEGDVTAPVIATLHPAFL 236

Query: 238 IQYPLIKKNTWHALITLKKALKN 260
           ++ P  K+  W  ++ L   L+ 
Sbjct: 237 LKQPQAKRQAWADMLELAARLEA 259


>gi|88810468|ref|ZP_01125725.1| Phage SPO1 DNA polymerase-related protein [Nitrococcus mobilis
           Nb-231]
 gi|88792098|gb|EAR23208.1| Phage SPO1 DNA polymerase-related protein [Nitrococcus mobilis
           Nb-231]
          Length = 265

 Score =  190 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 57/258 (22%), Positives = 105/258 (40%), Gaps = 8/258 (3%)

Query: 7   LSQEQILTIALFYADSGVYWVFDE---PNNEATYESQRKEKSIDSAIQP--ITNIRHIHS 61
           +     L    +    G+            +A  E+     SI+  +QP  +       +
Sbjct: 1   MKTRDGLFRLQYLQRLGIDVWVRRQGGAAEQAPVENTTGRASIERLVQPGVVVEDTADTN 60

Query: 62  PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121
           P                 L+  ++    C L  T +  +         LM+IG  P   +
Sbjct: 61  PARLITAEAEIARLDWEALRERVQHCERCLLHQTRMQGVFGIGNPQAQLMLIGEAPGAEE 120

Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ 181
           +  G+PF G+ G +LD+ML++I + R +++I+ +    PP NR+ +  E+  C P + RQ
Sbjct: 121 DRRGEPFVGRAGKLLDEMLRAIGLSRERVYITNVLKSRPPNNRDPTPDEVAACEPYLRRQ 180

Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241
           +ELI+P ++L +G     +   +      +  G W +        P   T HP  L++ P
Sbjct: 181 LELIAPSLILALGRIAAQYLLKSTQSL-GRLRGAWHHY--GPRATPLRVTYHPAYLLRSP 237

Query: 242 LIKKNTWHALITLKKALK 259
             K   W  L  +++ L+
Sbjct: 238 ADKHKAWQDLKQVRQCLR 255


>gi|313679738|ref|YP_004057477.1| phage spo1 DNA polymerase-related protein [Oceanithermus profundus
           DSM 14977]
 gi|313152453|gb|ADR36304.1| phage SPO1 DNA polymerase-related protein [Oceanithermus profundus
           DSM 14977]
          Length = 205

 Score =  190 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 11/192 (5%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           SL EL +       C L       +         LMI+G  P   ++  G+PF G+ G +
Sbjct: 2   SLEELAAQAAHCTACRLHEGRTHVVFGEGDPDAKLMIVGEGPGADEDAQGRPFVGRAGQL 61

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP-IIMRQIELISPKILLFIG 194
           LD++L++  I R+ ++I+ I    PPGNRN    E +IC    +++QIELI P+I++ +G
Sbjct: 62  LDRILEAAGIPRSSVYITNIVKCRPPGNRNPLPDEAKICSSLWLLKQIELIRPQIIVPLG 121

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWH 249
           +    FF         +  G+W         I      HP  L++ P       K  TW 
Sbjct: 122 SVATQFFLGEKL-PITKVRGQWFEWN----GIQVFPMFHPAYLLRNPSRAPGSPKALTWK 176

Query: 250 ALITLKKALKNL 261
            + T+K+ L  L
Sbjct: 177 DIQTVKQTLDRL 188


>gi|116621468|ref|YP_823624.1| phage SPO1 DNA polymerase-like protein [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116224630|gb|ABJ83339.1| phage SPO1 DNA polymerase-related protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 244

 Score =  190 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 54/256 (21%), Positives = 95/256 (37%), Gaps = 26/256 (10%)

Query: 7   LSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQ 66
           +  + +     FY D  +  ++            R+     +A+ P         P ++ 
Sbjct: 1   MDADSLRQYLEFYQDLHIQTLY------------RRTAPPVAAVTPAPIALAAPEPKMEL 48

Query: 67  ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126
              +A    SL ++   +   H C L       +     E   L+ +G  P   ++  G 
Sbjct: 49  PP-LAPPNDSLLKIIQDIGDCHRCKLGDARNKIVFGVGDEKAQLVFVGEGPGADEDEQGI 107

Query: 127 PFSGKTGNMLDKMLQSIEI------MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180
           PF G+ G +L +M+++          R  ++I  +    PPGNR     EMEIC   + R
Sbjct: 108 PFVGRAGQLLTQMIENTSKKEGIPLKRGDVYICNVVKCRPPGNRTPEPEEMEICGEFLYR 167

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ- 239
           Q+  I PK +  +G         +  +   +  GKW         IP + T HP  L++ 
Sbjct: 168 QLSTIRPKAICALGGTAARAVTGHK-EGVTKMRGKWFKWQ----DIPVMVTYHPSYLLRP 222

Query: 240 -YPLIKKNTWHALITL 254
                K+  W  L  +
Sbjct: 223 FNENAKREAWEDLKKV 238


>gi|34498909|ref|NP_903124.1| DNA-directed DNA polymerase [Chromobacterium violaceum ATCC 12472]
 gi|34104758|gb|AAQ61115.1| probable DNA-directed DNA polymerase, bacteriophage-type
           [Chromobacterium violaceum ATCC 12472]
          Length = 280

 Score =  190 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 53/240 (22%), Positives = 97/240 (40%), Gaps = 10/240 (4%)

Query: 20  ADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKAC--SL 77
           A+SG+     EP   +   + ++  S+       +               +A ++     
Sbjct: 41  AESGMPDPALEP--RSLIPAPQETASVAPPASNFSPPEQPQPAAEPLRAEVATESPLLDW 98

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            +L+  +    DC LC T   T+          M+IG  P ++++  G PF G+ G +LD
Sbjct: 99  PQLQRKVSDCQDCRLCETRTQTVFGRGNPQARWMLIGEAPGENEDRQGLPFVGRAGQLLD 158

Query: 138 KMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ML +  + R Q  +I+ +    PPGNRN +  E+  C   +++QI  I P +++ +G  
Sbjct: 159 NMLSAAGLDREQDVYIANVLKCRPPGNRNPAPDEIAACNGYLLQQIRHIQPTLIVALGRF 218

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                         +  GK          +P + + HP  L++    K   W  L+  +K
Sbjct: 219 AAQTLL-ETESSIGRLRGKVHRYQ----GLPLVVSYHPAYLLRNQPDKAKAWQDLLLARK 273


>gi|296120473|ref|YP_003628251.1| phage SPO1 DNA polymerase-related protein [Planctomyces limnophilus
           DSM 3776]
 gi|296012813|gb|ADG66052.1| phage SPO1 DNA polymerase-related protein [Planctomyces limnophilus
           DSM 3776]
          Length = 305

 Score =  190 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 87/220 (39%), Gaps = 6/220 (2%)

Query: 36  TYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCH-LCS 94
             E  ++      A    T       P       +A++   L +LK  + +   C  L S
Sbjct: 82  ELEMAKRSARSQMAPPAPTASGIAPQPPKLLNLPLAERVHELEKLKKCVANCTRCPELAS 141

Query: 95  TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154
           T   T+         +M +G  P   ++ +G PF G+ G +LD ++ + ++ R +I+I  
Sbjct: 142 TRKQTVFGVGNPQAKIMFLGEAPGADEDATGVPFVGRAGQLLDGIIAACKLKREEIYICN 201

Query: 155 ISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLG 214
           I    PPGNR  S  E   CR  +  QI +++P+ ++  G+           +   +  G
Sbjct: 202 ILRCRPPGNRLPSPEEAGNCREWLDGQISIVNPEYIICWGSTAAKNLLG-TTEAIGKLRG 260

Query: 215 KWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
           K               T HP  L++ P  KK+ W  +   
Sbjct: 261 KLFEY----GRAKVCCTYHPSYLLRNPPAKKDVWQDMKWF 296


>gi|289523071|ref|ZP_06439925.1| uracil-DNA glycosylase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503614|gb|EFD24778.1| uracil-DNA glycosylase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 211

 Score =  190 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 44/192 (22%), Positives = 81/192 (42%), Gaps = 9/192 (4%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            +   L+  ++    C L      ++    +   +LM +G  P   +++ G PF GK G 
Sbjct: 19  ETWKILEEKVKECRKCPLSENRTQSVFGEGSRKTELMFVGEGPGADEDLQGLPFVGKAGQ 78

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           +L+++  +  I R++++I+ +    PP NR  +  E   C   +  QI L+ PKIL+ +G
Sbjct: 79  LLNQIFAAAGIDRSEVYITNVVKCRPPQNRVPTVEECSACNDYLFAQISLVQPKILITLG 138

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK-----KNTWH 249
           N    +      +   Q  GKW +       I  +   HP  L++    K       TW 
Sbjct: 139 NTPTKWLLKTTHEGITQLRGKWFDWY----GIKLMPMFHPSYLLRNQSRKVGSPRHLTWQ 194

Query: 250 ALITLKKALKNL 261
            +  +K     +
Sbjct: 195 DIQEVKARWDEI 206


>gi|187928331|ref|YP_001898818.1| phage SPO1 DNA polymerase-like protein [Ralstonia pickettii 12J]
 gi|187725221|gb|ACD26386.1| phage SPO1 DNA polymerase-related protein [Ralstonia pickettii 12J]
          Length = 264

 Score =  190 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 54/238 (22%), Positives = 94/238 (39%), Gaps = 8/238 (3%)

Query: 24  VYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSL 83
           V     EP                        +  +      +A  IA  A    +L++ 
Sbjct: 30  VEVAAAEPVAVEVEADSFVAAESVPVRGEPPVMHALSDTAAPRAQRIA--AFDWAQLEAA 87

Query: 84  LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143
           + +   C LC    +T+        + M+IG  P + ++  G+PF G+ G +LD ML+SI
Sbjct: 88  VSNCTSCKLCERRTNTVFGVGDREAEWMLIGEAPGEQEDKQGEPFVGQAGKLLDSMLRSI 147

Query: 144 EIMRTQ-IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202
            + R + + I+ +    PPGNR+    E  +C P + RQI L+ P+I++ +G        
Sbjct: 148 GLSREKGVFIANVLKCRPPGNRDPEPDEAAMCDPYLKRQIALVKPRIIVVLGRVAAQNLL 207

Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
                   +  G   ++      +P + T HP  L++    K   W  L   +K    
Sbjct: 208 Q-TQTPVGKLRGTVHDVE----GVPVVVTYHPAYLLRTLTDKARAWEDLCLARKIYAE 260


>gi|206602194|gb|EDZ38676.1| Uracil-DNA glycosylase, family 4 [Leptospirillum sp. Group II
           '5-way CG']
          Length = 245

 Score =  190 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 2/203 (0%)

Query: 56  IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115
                      A  +      L  L+  + +   C L  T    +         LM +G 
Sbjct: 34  PSPGKDVEKVPAAPMPSFPEDLDGLERFVLACQACSLSETRNQVVFGEGRGTSGLMFVGE 93

Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICR 175
            P   ++ +G+PF G+ G +L KM+Q++ + R +++I+      PPGNR  S  E + C 
Sbjct: 94  GPGADEDRTGRPFVGRAGELLTKMIQAMGLSREEVYIANTVKCRPPGNRVPSPEERKACF 153

Query: 176 PIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
           P +  QI L+ PK ++ +G           +    +  G    L   +  I  + T HP 
Sbjct: 154 PFLEAQIRLLKPKYMILLGQTAAQVVL-RQSAGITRIRGTCCELP-EYPGIKIMPTYHPA 211

Query: 236 ELIQYPLIKKNTWHALITLKKAL 258
            L++ P  K++ W  L T+   +
Sbjct: 212 YLLRNPSAKRDVWSDLQTVMGWM 234


>gi|33602783|ref|NP_890343.1| bacteriophage-related DNA polymerase [Bordetella bronchiseptica
           RB50]
 gi|33577225|emb|CAE35782.1| bacteriophage-related DNA polymerase [Bordetella bronchiseptica
           RB50]
          Length = 242

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 55/223 (24%), Positives = 94/223 (42%), Gaps = 3/223 (1%)

Query: 36  TYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCST 95
                R  +   +A Q             + A +       L +L+ L++    C LC  
Sbjct: 20  AASPARAPRPPVAAPQRAEPAAEADGQAARAAVAARAAGADLGQLQQLVQDCTACGLCQG 79

Query: 96  SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISM 154
               +     +    M++G  P + ++  G PF G++G +LD MLQS+ + R +   I+ 
Sbjct: 80  RRHAVFGMGAQPARWMVVGEAPGEQEDRQGLPFVGRSGKLLDAMLQSVGMSRERDVFIAN 139

Query: 155 ISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLG 214
           +    PPGNRN    E+  C P + RQI L++P+ +L +G          +A       G
Sbjct: 140 VIKCRPPGNRNPKPEEIAACSPYLRRQIALLNPERILVLGRFAAQTLLGTEA-TIGNLRG 198

Query: 215 KWSNLCT-PHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
           +  +L T     IP + + HP  L++ P  K   W  L+   +
Sbjct: 199 RVHSLQTDEGRSIPVVVSYHPAYLLRSPAEKARAWQDLLLAAR 241


>gi|325474785|gb|EGC77971.1| DNA polymerase domain-containing protein [Treponema denticola
           F0402]
          Length = 264

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 64/266 (24%), Positives = 108/266 (40%), Gaps = 18/266 (6%)

Query: 7   LSQEQILTIALFYADSGVY---WVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPL 63
           +  E+  T+  F+  +  Y   +  DE   +    +  +    D+++        +  PL
Sbjct: 1   MKAEEKKTLYTFFRTASEYLSGFKTDEEYPDFADTALSETAIPDTSLPETEGTDGLTIPL 60

Query: 64  VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQ-------TEGQDLMIIGYT 116
                       SL ++ + + S   C LC    +T+               ++M+IG  
Sbjct: 61  NDT--DSENGFESLEKVYAQIASCKACRLCERRHNTVAGEGPCEFSNFDNKIEVMVIGEG 118

Query: 117 PSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICR 175
           P   ++  G+PF GK G +LDKML +IE+ R    +I+ +    PP NR+    E   CR
Sbjct: 119 PGADEDAQGRPFVGKAGQLLDKMLAAIELYRTHNCYITNVVKCRPPNNRDPLPDETAACR 178

Query: 176 PIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
             +  QI LI PK +L +G            +   +  GK+         IP +AT HP 
Sbjct: 179 NYLNAQIALIKPKAILVVGRVALQNLLG-TQEGIGKMHGKFFEYQN----IPLMATYHPS 233

Query: 236 ELIQYPLIKKNTWHALITLKKALKNL 261
            L++   +K+  W  L   +  L  L
Sbjct: 234 ALLRDVNLKRPAWEDLKLFRSRLNEL 259


>gi|189183624|ref|YP_001937409.1| bacteriophage-type DNA polymerase [Orientia tsutsugamushi str.
           Ikeda]
 gi|189180395|dbj|BAG40175.1| bacteriophage-type DNA polymerase [Orientia tsutsugamushi str.
           Ikeda]
          Length = 268

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 67/252 (26%), Positives = 125/252 (49%), Gaps = 9/252 (3%)

Query: 15  IALFYADSGVY--WVFD--EPNNEATYESQRKEKSIDSAIQPI-TNIRHIHSPLVQQADS 69
              +Y+  G+    ++D     N+    +  K K++ +       N ++ H  ++  +  
Sbjct: 11  ALKWYSYMGIDDNIIYDGTASLNQCNSINISKAKTLIAQNSSGFNNNQNTHLAVLSNSRQ 70

Query: 70  IAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129
           +A    +L +LKS + SF  C L  T+L+T+         +M+IG  P  +++  G PF 
Sbjct: 71  LADSVHTLEDLKSSVTSFDGCLLKKTALNTVFGDGIPSAQIMLIGEAPGQNEDKHGIPFC 130

Query: 130 GKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188
           G++G +LD MLQSI + RT+  +I+    W PP NR  ++ E+ ICRP + + I +I+PK
Sbjct: 131 GESGKLLDNMLQSINLSRTKNVYITNTVFWRPPANRRPTSDELVICRPFVEKHIAIINPK 190

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI--IPTLATVHPQELIQYPLIKKN 246
           +++ +G+         D  K  +   ++      +    IP  A  HP  +++ PL KK 
Sbjct: 191 LIILVGSTAATSMLG-DHVKISKIRQEYFLYKNCYLTFSIPITAIFHPAYMLRQPLQKKA 249

Query: 247 TWHALITLKKAL 258
            W  L+ +++ +
Sbjct: 250 CWFDLLKIQQFI 261


>gi|73541626|ref|YP_296146.1| Phage SPO1 DNA polymerase-related protein [Ralstonia eutropha
           JMP134]
 gi|72119039|gb|AAZ61302.1| Phage SPO1 DNA polymerase-related protein [Ralstonia eutropha
           JMP134]
          Length = 285

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 7/213 (3%)

Query: 46  IDSAIQPITNIR-HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQ 104
            ++  +P+      +         + A  A     L + + +   C LCST  +T+    
Sbjct: 69  AEAFAEPLPPAVVDLPVIAPVSDRAAAIAAMDWPTLDAAVAACEACGLCSTRTNTVFGVG 128

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGN 163
               + M+IG  P +++++ G+PF G+ G +LD ML S+ + R   + I+ +    PPGN
Sbjct: 129 DREAEWMLIGEAPGENEDLQGEPFVGQAGKLLDNMLASLGLRRGRNVFIANVLKCRPPGN 188

Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH 223
           RN    E++ C P + RQI L+ PK+++ +G                +  G   +     
Sbjct: 189 RNPEPAEVDQCEPFLKRQIALVRPKVIVVLGRFAAQSLL-RTTTPIGKLRGTVHSYE--- 244

Query: 224 SIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
             IP + T HP  L++    K   W  L   ++
Sbjct: 245 -GIPVVVTYHPAYLLRTLTDKARAWEDLCLARE 276


>gi|268315592|ref|YP_003289311.1| phage SPO1 DNA polymerase-like protein [Rhodothermus marinus DSM
           4252]
 gi|262333126|gb|ACY46923.1| phage SPO1 DNA polymerase-related protein [Rhodothermus marinus DSM
           4252]
          Length = 263

 Score =  189 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 58/252 (23%), Positives = 101/252 (40%), Gaps = 9/252 (3%)

Query: 14  TIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQK 73
            +   YA  G    +  P   +T E     + +    QP             +A    + 
Sbjct: 11  ALLQEYALLGPLGFWKTPVAMSTPEHAPSNQDLFGQPQPPPESAPADPYARIEALIPPES 70

Query: 74  A----CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129
                 +L E+   +       + +   + +        DLM+IG  P   ++  G+PF 
Sbjct: 71  PLRAMRTLDEVARYVAETVLIPIDARRTNPVFGVGNPEADLMVIGEAPGAEEDRQGEPFV 130

Query: 130 GKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189
           G  G +L+KML++I   R +++I+ +    PP NR+    E+E   PI+ +QI L+ P+I
Sbjct: 131 GPAGQLLNKMLKAIGFEREEVYITNVLKSRPPHNRDPQPDEIEAHLPILYKQIALVKPRI 190

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249
           +L +G    N     +        GK  +       +P + T HP  L++ P  K+  W 
Sbjct: 191 ILCVGRIAGNALLGRNGSLRA-LRGKVHDF----HGLPVVVTFHPAALLRNPQWKRLAWE 245

Query: 250 ALITLKKALKNL 261
            L  L+     L
Sbjct: 246 DLQLLRAHYDRL 257


>gi|197121903|ref|YP_002133854.1| phage SPO1 DNA polymerase-related protein [Anaeromyxobacter sp. K]
 gi|196171752|gb|ACG72725.1| phage SPO1 DNA polymerase-related protein [Anaeromyxobacter sp. K]
          Length = 295

 Score =  189 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 56/282 (19%), Positives = 95/282 (33%), Gaps = 41/282 (14%)

Query: 10  EQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADS 69
            ++     +   +GV  V   P      E          A                    
Sbjct: 15  AELARHLRWLEAAGVREV---PVPVLAVEPPAPAAHARQAGPAAERGAPAGRAPASPPPP 71

Query: 70  IAQK---------------------------------ACSLHELKSLLRSFHDCHLCSTS 96
             Q                                  + +L +++  L     C L    
Sbjct: 72  GQQAPPAAPREAPARTPAPVAPAPVAGAHRIGEKGCGSAALVQVRDALGDCRRCKLAGGR 131

Query: 97  LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156
            + +        +L+ +G  P   ++  G+PF GK G +L KM+Q++   R Q++I+ + 
Sbjct: 132 TTLVFGVGNPQAELVFVGEGPGADEDREGEPFVGKAGQLLTKMIQAMGYQREQVYIANVV 191

Query: 157 PWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKW 216
              PPGNRN    E+E C P +  Q+  I P++++ +G          D     +  G+W
Sbjct: 192 KCRPPGNRNPEPDEIEACEPFLRAQLAAIRPRVVVALGKFAAQTLL-RDTTPITRLRGRW 250

Query: 217 SNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
                    I  + T HP  L++ P  KK  W  L  + K L
Sbjct: 251 REYE----GIRLMPTFHPAYLLRSPEEKKKAWEDLQLVMKEL 288


>gi|160872254|ref|ZP_02062386.1| phage SPO1 DNA polymerase domain protein [Rickettsiella grylli]
 gi|159121053|gb|EDP46391.1| phage SPO1 DNA polymerase domain protein [Rickettsiella grylli]
          Length = 240

 Score =  189 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 3/206 (1%)

Query: 54  TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113
             ++                  +  ELK  +     C L  T  + +        DL+++
Sbjct: 30  ARVKDEDMSEKPMTRQQKISTMNWQELKLAVNHCKACDLYKTRSNPVFGVGNPHADLLVV 89

Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173
           G  P   ++  G+PF G+ G +L  ML SI   R   +I+ I    PP NR+ S  E+  
Sbjct: 90  GEAPGAHEDKQGEPFVGRGGQLLTNMLSSIGFKREDYYIANILKSRPPNNRDPSLEEVSA 149

Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
           C P ++RQI LI PK++L +G    ++  + ++    +  G           IP L T H
Sbjct: 150 CTPYLLRQINLIKPKLILAVGRIAAHYLLSTES-TMARLRGNLF--YFGERKIPLLVTYH 206

Query: 234 PQELIQYPLIKKNTWHALITLKKALK 259
           P  L++ P  K+  W  +  +KK L 
Sbjct: 207 PAYLLRSPREKRKAWQDMRCVKKQLD 232


>gi|94310339|ref|YP_583549.1| phage SPO1 DNA polymerase-related protein [Cupriavidus
           metallidurans CH34]
 gi|93354191|gb|ABF08280.1| DNA polymerase bacteriophage-type,uracil-DNA glycosylase
           superfamily [Cupriavidus metallidurans CH34]
          Length = 317

 Score =  189 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 92/228 (40%), Gaps = 6/228 (2%)

Query: 30  EPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHD 89
              NEA      +          +     I    VQ              L   +     
Sbjct: 86  HAVNEAEVAETIEAFDAPGPAHAVEVPVPIALAPVQDGREALIATMDWPVLADSVAGCTA 145

Query: 90  CHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-T 148
           C LCST  +T+     +  + M++G  P +++++ G+PF G+ G +LD ML ++ + R  
Sbjct: 146 CGLCSTRTNTVFGVGDQQAEWMLVGEAPGENEDLQGEPFVGQAGKLLDNMLGALGLARGR 205

Query: 149 QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQK 208
            ++I+ +    PPGNRN    E+  C P + RQI LI PK+++ +G         +    
Sbjct: 206 NVYIANVLKCRPPGNRNPEPGEVAQCEPYLKRQIALIKPKVIVVLGRFAAQSLLRSTTPI 265

Query: 209 TYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                GK       +  IP + T HP  L++    K   W  L   ++
Sbjct: 266 -----GKLRGAVHSYEGIPVVVTYHPAYLLRTLTDKARAWEDLCLARE 308


>gi|300704264|ref|YP_003745867.1| uracil-DNA glycosylase,phage-like protein [Ralstonia solanacearum
           CFBP2957]
 gi|299071928|emb|CBJ43257.1| uracil-DNA glycosylase,phage-related protein [Ralstonia
           solanacearum CFBP2957]
          Length = 279

 Score =  189 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 53/240 (22%), Positives = 96/240 (40%), Gaps = 10/240 (4%)

Query: 26  WVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKAC----SLHELK 81
            V DEP          + ++I S   P           +  A  + +          +L+
Sbjct: 41  AVADEPAPFIIEPPVIEPRAIVSEAPPPMAPAAAPMADISVAPELPRAQRIAAFDWAQLE 100

Query: 82  SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
           + +     C LC     T+        + M+IG  P + ++  G+PF G+ G +LD ML+
Sbjct: 101 AAVSGCTACKLCERRTQTVFGVGDRQAEWMLIGEAPGEQEDRQGEPFVGQAGKLLDSMLR 160

Query: 142 SIEIMRTQ-IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF 200
           ++ + R   + I+ +    PPGNR+    E+ +C P + RQI L+ P++++ +G      
Sbjct: 161 AVGLSRETGVFIANVLKCRPPGNRDPEPDEVAMCDPYLKRQIALVKPRVIIVLGRFAAQS 220

Query: 201 FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
                     +  GK   +      +P + T HP  L++    K   W  L   +K    
Sbjct: 221 LLQ-TQTPVGKLRGKVHEV----DGVPVVVTYHPAYLLRTLTDKARAWEDLCLARKVYTE 275


>gi|167816412|ref|ZP_02448092.1| putative phage-related DNA polymerase [Burkholderia pseudomallei
           91]
          Length = 262

 Score =  189 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
           +P+             A + +       EL++ +     C LC    +T+     E  D 
Sbjct: 49  EPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCERCRLCEKRTNTVFGVGDERADW 108

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169
           M++G  P ++++  G+PF G+ G +LD ML+++ + R   ++I+ +    PPGNRN    
Sbjct: 109 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 168

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E+  C P + RQ+ L+ PK+++ +G          D        G+          +P +
Sbjct: 169 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 223

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            T HP  L++    K   W  L       ++
Sbjct: 224 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 254


>gi|149926134|ref|ZP_01914396.1| Phage SPO1 DNA polymerase-related protein [Limnobacter sp. MED105]
 gi|149824952|gb|EDM84164.1| Phage SPO1 DNA polymerase-related protein [Limnobacter sp. MED105]
          Length = 233

 Score =  189 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 55/190 (28%), Positives = 93/190 (48%), Gaps = 2/190 (1%)

Query: 68  DSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127
           D +   + SL  L+ ++     C LC T   T+ A       LM++G  P   ++ +G+P
Sbjct: 41  DEMLPASLSLESLQEMVAVCKKCGLCETRKQTVFADGIPHAPLMVVGEGPGVDEDATGRP 100

Query: 128 FSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186
           F GK+G +LD+ML+++   R    +I+ +   HPPGNRN    E++ C P +++QI+   
Sbjct: 101 FVGKSGQLLDRMLKAVGASRTNNTYIANVVKCHPPGNRNPEQAEIDQCSPYLVQQIKASR 160

Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKN 246
           P++LL +G        N       +  G    +      IP + T HP  L++    K+ 
Sbjct: 161 PQVLLLVGRFAIQTLLNTKKPV-GELRGTVHRVIVDGLDIPAVVTYHPAYLLRRSEEKQK 219

Query: 247 TWHALITLKK 256
            W  L+ LK+
Sbjct: 220 AWDDLLLLKQ 229


>gi|167903291|ref|ZP_02490496.1| phage SPO1 DNA polymerase domain protein [Burkholderia pseudomallei
           NCTC 13177]
          Length = 311

 Score =  189 bits (479), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
           +P+             A + +       EL++ +     C LC    +T+     E  D 
Sbjct: 98  EPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDERADW 157

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169
           M++G  P ++++  G+PF G+ G +LD ML+++ + R   ++I+ +    PPGNRN    
Sbjct: 158 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 217

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E+  C P + RQ+ L+ PK+++ +G          D        G+          +P +
Sbjct: 218 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 272

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            T HP  L++    K   W  L       ++
Sbjct: 273 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 303


>gi|220916695|ref|YP_002491999.1| phage SPO1 DNA polymerase-related protein [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219954549|gb|ACL64933.1| phage SPO1 DNA polymerase-related protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 205

 Score =  188 bits (478), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 8/202 (3%)

Query: 60  HSPLVQQADSIAQK---ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYT 116
               V  A  I +K   + +L +++  L     C L     + +        +L+ +G  
Sbjct: 2   APAPVAGAHRIGEKGCGSAALVQVRDALGDCRRCKLAGGRTTLVFGVGNPQAELVFVGEG 61

Query: 117 PSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP 176
           P   ++  G+PF GK G +L KM+Q++   R Q++I+ +    PPGNRN    E+E C P
Sbjct: 62  PGADEDREGEPFVGKAGQLLTKMIQAMGYQREQVYIANVVKCRPPGNRNPEPDEIEACEP 121

Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236
            +  Q+  I P++++ +G          D     +  G+W         I  + T HP  
Sbjct: 122 FLRAQLAAIRPRVVVALGKFAAQTLL-RDTTPITRLRGRWREYE----GIRLMPTFHPAY 176

Query: 237 LIQYPLIKKNTWHALITLKKAL 258
           L++ P  KK  W  L  + K L
Sbjct: 177 LLRSPEEKKKAWEDLQLVMKEL 198


>gi|209518016|ref|ZP_03266847.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp. H160]
 gi|209501520|gb|EEA01545.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp. H160]
          Length = 292

 Score =  188 bits (478), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 56/245 (22%), Positives = 97/245 (39%), Gaps = 22/245 (8%)

Query: 29  DEPNNEATYESQRKEKSIDSAIQPITNIRH-----------IHSPLVQQADSIAQKAC-- 75
           DEP         + +   D +  P  ++               +P   +A   A      
Sbjct: 39  DEPVARPEASQPQPQSQPDRSAPPTLDVPPDDDFAWFDDPGAPAPEPVEARRDAPALPAI 98

Query: 76  ---SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
                  L   +     C LC    +T+        D M+IG  P ++++  G+PF G+ 
Sbjct: 99  HTLDWDALAERVAGCEACRLCEKRTNTVFGVGDREADWMLIGEAPGENEDRQGEPFVGQA 158

Query: 133 GNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191
           G +LD ML+S+ + R T ++I+ +    PPGNRN    E+  C P + RQ+ L+ PK+++
Sbjct: 159 GKLLDNMLRSLALARGTNVYIANVIKCRPPGNRNPQPDEVARCEPYLQRQVSLVKPKLIV 218

Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
            +G          +A       G+          +P + T HP  L++    K   W  L
Sbjct: 219 ALGRFAAQSLLKTEA-SISSLRGRVHTYE----GVPVIVTYHPAYLLRSLPDKAKAWADL 273

Query: 252 ITLKK 256
              ++
Sbjct: 274 CLARE 278


>gi|42527991|ref|NP_973089.1| DNA polymerase domain-containing protein [Treponema denticola ATCC
           35405]
 gi|41819036|gb|AAS13008.1| DNA polymerase domain protein [Treponema denticola ATCC 35405]
          Length = 264

 Score =  188 bits (478), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 65/266 (24%), Positives = 107/266 (40%), Gaps = 18/266 (6%)

Query: 7   LSQEQILTIALFYADSGVY---WVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPL 63
           +  E+  T+  F+  +  Y   +  DE   +       +    D+A+        +  PL
Sbjct: 1   MKAEEKKTLYTFFRTASEYLSGFKTDEEYPDFADTVLSETAIPDTALPETDEAAGLTIPL 60

Query: 64  VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQ-------TEGQDLMIIGYT 116
                       SL ++ + + S   C LC    +T+               ++M+IG  
Sbjct: 61  SDTDSESG--FESLEKVYAQIASCKACRLCERRHNTVAGEGPCEFSNFDNKIEVMVIGEG 118

Query: 117 PSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICR 175
           P   ++  G+PF GK G +LDKML +IE+ R    +I+ +    PP NR+    E   CR
Sbjct: 119 PGADEDAQGRPFVGKAGQLLDKMLAAIELYRTHNCYITNVVKCRPPNNRDPLPDETAACR 178

Query: 176 PIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
             +  QI LI PK +L +G            +   +  GK+         IP +AT HP 
Sbjct: 179 NYLNAQIALIRPKAILVVGRVALQNLL-ETQEGIGKMHGKFFEYQN----IPLMATYHPS 233

Query: 236 ELIQYPLIKKNTWHALITLKKALKNL 261
            L++   +K+  W  L   +  L  L
Sbjct: 234 ALLRDVNLKRPAWEDLKLFRSRLNEL 259


>gi|157804236|ref|YP_001492785.1| N-terminus of bacteriophage-type DNA polymerase [Rickettsia
           canadensis str. McKiel]
 gi|157785499|gb|ABV74000.1| N-terminus of bacteriophage-type DNA polymerase [Rickettsia
           canadensis str. McKiel]
          Length = 262

 Score =  188 bits (478), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 66/253 (26%), Positives = 121/253 (47%), Gaps = 9/253 (3%)

Query: 16  ALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSP----LVQQADSI 70
             + +  GV Y+   +P      + Q   +      + I  I  + +      +  A S+
Sbjct: 5   LKWLSAIGVEYYCSTQPQKLNFDKPQENNQINPMPRKTIDKILEVDTDKMHTNISLARSL 64

Query: 71  AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130
           A K  ++ EL+  L +F+ C L   S +T+     +   +M+IG  P  ++++ G PF G
Sbjct: 65  ADKVNNIEELRESLLNFNGCKLKKFSTNTVFGDGNQKAQVMLIGEAPGSTEDLKGIPFCG 124

Query: 131 KTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189
           ++GN+LD ML SI I R    +I+    W PP NR  +  E++ICRP + + I LI+PK+
Sbjct: 125 ESGNLLDNMLHSIGISRKNNAYITNTVFWRPPANRQPTLEEVDICRPFVEKHIALINPKL 184

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT--VHPQELIQYPLIKKNT 247
           ++ +G+               +   ++      +   P   T   HP  L+++P+ K+ +
Sbjct: 185 IILVGSTAATSLLG-KNSGITKIRQEYYFYTNKYLSSPIQTTTIFHPAYLLRHPMQKRTS 243

Query: 248 WHALITLKKALKN 260
           W+ L+ +K+ L N
Sbjct: 244 WYDLLKIKEYLVN 256


>gi|17546088|ref|NP_519490.1| DNA polymerase-related protein, bacteriophage-type [Ralstonia
           solanacearum GMI1000]
 gi|17428384|emb|CAD15071.1| putative uracil-dna glycosylase-related protein [Ralstonia
           solanacearum GMI1000]
          Length = 292

 Score =  188 bits (478), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 50/204 (24%), Positives = 85/204 (41%), Gaps = 6/204 (2%)

Query: 58  HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117
              S       +    A    +L++ +     C LC     T+        D M+IG  P
Sbjct: 90  PTDSTDPVAPRAQRIAAFDWAQLEAAVSGCTACKLCERRTQTVFGVGDRQADWMLIGEAP 149

Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQ-IHISMISPWHPPGNRNLSNIEMEICRP 176
            + ++  G+PF G+ G +LD ML++I + R   + I+ +    PPGNR+    E+ +C P
Sbjct: 150 GEQEDRQGEPFVGQAGKLLDSMLRAIGLSRETGVFIANVLKCRPPGNRDPEPDEVAMCDP 209

Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236
            + RQI LI P++++ +G                +  GK   +      +P + T HP  
Sbjct: 210 YLKRQIALIKPRVIVVLGRFAAQSLLQ-TQTPVGKLRGKVHEV----DGVPVVVTYHPAY 264

Query: 237 LIQYPLIKKNTWHALITLKKALKN 260
           L++    K   W  L   +K    
Sbjct: 265 LLRTLTDKARAWEDLCLARKVYTE 288


>gi|189499343|ref|YP_001958813.1| phage SPO1 DNA polymerase-related protein [Chlorobium
           phaeobacteroides BS1]
 gi|189494784|gb|ACE03332.1| phage SPO1 DNA polymerase-related protein [Chlorobium
           phaeobacteroides BS1]
          Length = 208

 Score =  188 bits (478), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 5/203 (2%)

Query: 58  HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117
             +S    Q +S A    +L++L    ++   C L  T  + +         +++IG  P
Sbjct: 7   EENSSANAQKESAAGAFRNLNDLYEQSKNCRKCRLADTRTNFVFGEGNPEAKIVVIGEAP 66

Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177
              ++  G+PF G++G +LDK+L++I   R  + I  I    PP NRN    E+  C P 
Sbjct: 67  GAEEDAQGRPFVGRSGKLLDKILEAIGFSRDDVFICNIIKCRPPANRNPLADEITCCMPW 126

Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237
           +  Q+ L+ P +LL +G    N   +N         G         +    + T HP  L
Sbjct: 127 LNAQLALLDPAVLLLLGKVAANTLLDNKQSM-----GNLRGKIIRWNGYDVIVTYHPAAL 181

Query: 238 IQYPLIKKNTWHALITLKKALKN 260
           ++ P  K+  W  +  L+     
Sbjct: 182 LRNPNWKRQCWDDVRMLRSHYDK 204


>gi|148284759|ref|YP_001248849.1| Uracil-DNA glycosylase [Orientia tsutsugamushi str. Boryong]
 gi|146740198|emb|CAM80476.1| Uracil-DNA glycosylase [Orientia tsutsugamushi str. Boryong]
          Length = 268

 Score =  188 bits (478), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 67/252 (26%), Positives = 124/252 (49%), Gaps = 9/252 (3%)

Query: 15  IALFYADSGVY--WVFD--EPNNEATYESQRKEKSIDSAIQPI-TNIRHIHSPLVQQADS 69
              +Y+  G+    ++D     ++    S  K K++         N ++ H  ++  +  
Sbjct: 11  ALKWYSYMGIDDNIIYDGTASFDQCNSISISKAKTLIDQNSAGFNNNQNTHLAVLSDSRQ 70

Query: 70  IAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129
           +A    +L +LKS + SF  C L  T+L+T+         +M+IG  P  +++  G PF 
Sbjct: 71  LADSVHTLEDLKSSVTSFDGCLLKKTALNTVFGDGIPSAPIMLIGEAPGQNEDKHGIPFC 130

Query: 130 GKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188
           G++G +LD MLQSI + RT+  +I+    W PP NR  ++ E+ ICRP + + I +I+PK
Sbjct: 131 GESGKLLDNMLQSINLSRTKNVYITNTVFWRPPANRRPTSDELVICRPFVEKHIAIINPK 190

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI--IPTLATVHPQELIQYPLIKKN 246
           +++ +G+         D  K  +   ++      +    IP  A  HP  +++ PL KK 
Sbjct: 191 LIILVGSTAATSMLG-DHVKISKIRQEYFLYKNCYLTFSIPITAIFHPAYMLRQPLQKKA 249

Query: 247 TWHALITLKKAL 258
            W  L+ +++ +
Sbjct: 250 CWFDLLKIQQFI 261


>gi|171057063|ref|YP_001789412.1| phage SPO1 DNA polymerase-like protein [Leptothrix cholodnii SP-6]
 gi|170774508|gb|ACB32647.1| phage SPO1 DNA polymerase-related protein [Leptothrix cholodnii
           SP-6]
          Length = 294

 Score =  188 bits (478), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 57/224 (25%), Positives = 104/224 (46%), Gaps = 11/224 (4%)

Query: 43  EKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICA 102
              +D A             L+Q A + A  A    EL++++ +   C LC +   T+  
Sbjct: 74  RPRVDPAPAAPAAPLARPGGLIQAAPAGAVSALDWPELQAVVEACRACGLCESRRQTVFG 133

Query: 103 TQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR------TQIHISMIS 156
                   M++G  P + +++ G+PF GK G +LD ML+++ + R       Q++I+ + 
Sbjct: 134 VGHHQAHWMLVGEAPGEQEDLQGEPFVGKAGQLLDNMLRAVGLTREQAEPARQVYIANVL 193

Query: 157 PWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKW 216
              PPGNRN    E++ C P + RQ+EL+ P+++L +G           ++   +  GK 
Sbjct: 194 KCRPPGNRNPDPQEVQRCEPFLQRQVELVRPRLILAMGRFAVQSLLK-TSEPIGRLRGKS 252

Query: 217 SNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            +       +P + T HP  L++ PL K   W  L   ++ ++ 
Sbjct: 253 HHY----HGVPVVVTYHPAYLLRNPLDKARAWEDLCLARELIQA 292


>gi|167720198|ref|ZP_02403434.1| putative phage-related DNA polymerase [Burkholderia pseudomallei
           DM98]
          Length = 237

 Score =  188 bits (477), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
           +P+             A + +       EL++ +     C LC    +T+     E  D 
Sbjct: 24  EPVHEPALPDVAARPAATTPSVAELGWDELRARVADCERCRLCEKRTNTVFGVGDERADW 83

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169
           M++G  P ++++  G+PF G+ G +LD ML+++ + R   ++I+ +    PPGNRN    
Sbjct: 84  MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 143

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E+  C P + RQ+ L+ PK+++ +G          D        G+          +P +
Sbjct: 144 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 198

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            T HP  L++    K   W  L       ++
Sbjct: 199 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 229


>gi|114319713|ref|YP_741396.1| phage SPO1 DNA polymerase-related protein [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114226107|gb|ABI55906.1| phage SPO1 DNA polymerase-related protein [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 264

 Score =  188 bits (477), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 57/254 (22%), Positives = 104/254 (40%), Gaps = 15/254 (5%)

Query: 19  YADSGVYWVFDEP---NNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKAC 75
               GV      P      A       +   D A +P      + +       + A +A 
Sbjct: 14  LRQMGVDLYVPRPGAGPQVADAVPAGPDPVRDGAPEPGPAPADVVTAPPAAEPAAASEAD 73

Query: 76  ---------SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126
                    +   L+  +     C LC    +T+    +   DL+++G  P   ++  G+
Sbjct: 74  PTSGDVARLNWAALEDRVAGCRLCGLCEGRRNTVFGVGSRQADLVLVGEGPGAEEDKRGE 133

Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186
           PF G+ G +LD+ML +I + R++++I  +    PP NR+    E+  CRP + RQ+ L+ 
Sbjct: 134 PFVGQAGRLLDRMLAAIGLDRSRVYICNVVKCRPPRNRDPRPEEVAACRPYLERQLTLLE 193

Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKN 246
           P++++ +G  + +   N       +  G           +P LAT HP  L++ P  K  
Sbjct: 194 PRLIVALGRVSAHQLLNVTTPL-GRLRGGLHRYAPVD--VPLLATYHPAYLLRNPADKAR 250

Query: 247 TWHALITLKKALKN 260
            W  L  +++ L  
Sbjct: 251 AWEDLKRIRRILAE 264


>gi|300113321|ref|YP_003759896.1| phage SPO1 DNA polymerase-like protein [Nitrosococcus watsonii
           C-113]
 gi|299539258|gb|ADJ27575.1| phage SPO1 DNA polymerase-related protein [Nitrosococcus watsonii
           C-113]
          Length = 231

 Score =  188 bits (477), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 93/220 (42%), Gaps = 7/220 (3%)

Query: 41  RKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI 100
           ++ +   +   P+        P+   A  +++      EL   +     C L  +   T+
Sbjct: 18  QQRQPTSTGKTPLVETGEEPIPVAPSAGVMSE----WEELAVQVAGCKACSLHRSRTQTV 73

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160
                +    +I+G  P   ++  G+PF G+ G +L+ ML+++ + R Q++I+ I    P
Sbjct: 74  FGVGDQAAKWLIVGEAPGAEEDRQGEPFVGRAGQLLNAMLEAVGLQRGQVYIANILKCRP 133

Query: 161 PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220
           P NR+    E+  C   + RQI L+ P+I+L +G         +      +  G      
Sbjct: 134 PNNRDPLPEEVAHCESYLRRQIALLRPRIILAVGRVAGQNLLKSSLPL-GRLRGSVHQY- 191

Query: 221 TPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            P + IP + T HP  L++ P  K+  W  L    K  + 
Sbjct: 192 -PETAIPLVVTYHPAYLLRAPREKRRAWQDLRLALKVYRE 230


>gi|323701469|ref|ZP_08113142.1| phage SPO1 DNA polymerase-related protein [Desulfotomaculum
           nigrificans DSM 574]
 gi|323533478|gb|EGB23344.1| phage SPO1 DNA polymerase-related protein [Desulfotomaculum
           nigrificans DSM 574]
          Length = 184

 Score =  188 bits (476), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 4/186 (2%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           SL +L   ++    C L +   + +         LM+IG  P   ++  G+PF G+ G +
Sbjct: 2   SLEQLALDIQGCTRCGLAAGRTNIVFGDGNPSGKLMLIGEGPGKDEDEQGRPFVGRAGQL 61

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           LD++L +I + R  ++I+ I    PP NR  +  E   C P + RQIELI P+I++ +G+
Sbjct: 62  LDRILAAINLTRQDVYIANIVKCRPPNNRVPTRAEAVACLPYLYRQIELIKPRIIVLLGS 121

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
                    +A +  +  G+W    +    I  + T HP  +++ P  ++  W     ++
Sbjct: 122 TALQNLIGPEA-RITKMRGQWLESKS---GIKIMPTFHPAAVLRDPNKRRPVWEDFQKIQ 177

Query: 256 KALKNL 261
           +    L
Sbjct: 178 EEYLRL 183


>gi|288940110|ref|YP_003442350.1| phage SPO1 DNA polymerase-like protein [Allochromatium vinosum DSM
           180]
 gi|288895482|gb|ADC61318.1| phage SPO1 DNA polymerase-related protein [Allochromatium vinosum
           DSM 180]
          Length = 331

 Score =  188 bits (476), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 59/238 (24%), Positives = 97/238 (40%), Gaps = 11/238 (4%)

Query: 24  VYWVFDEPNNEATY---ESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHEL 80
                 EP +       E+     S+      + +     +  V   + +         L
Sbjct: 102 ADAPSAEPESWPFPDWDETPEYSPSLMDEWDAMGHPPASEAEAVNPIERM-----DWDAL 156

Query: 81  KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML 140
            + +R    C L  T   T+        DLMIIG  P   ++  G+PF G+ G +L +ML
Sbjct: 157 DAAVRGCRACRLWETRTKTVFGVGDRRADLMIIGEAPGADEDRQGEPFVGRAGQLLTRML 216

Query: 141 QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF 200
            +I   R Q++I+ +    PPGNR+    E   C+  + RQ+ LI P+++L +G  +   
Sbjct: 217 AAIGFSREQVYIANVLKCRPPGNRDPKPDEALACQAYLHRQVALIEPRVILSVGRISAQQ 276

Query: 201 FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
               D     +  G+W +    H  IP   T HP  L++ P  K   W  L  + + L
Sbjct: 277 LLKTDTPV-GRLRGQWFDYGPAH--IPLRVTYHPAYLLRSPEQKAKAWDDLTEVWRRL 331


>gi|67639488|ref|ZP_00438341.1| uracil-DNA glycosylase, family 4 [Burkholderia mallei GB8 horse 4]
 gi|238520036|gb|EEP83500.1| uracil-DNA glycosylase, family 4 [Burkholderia mallei GB8 horse 4]
          Length = 252

 Score =  188 bits (476), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
           +P+             A + +       EL++ +     C LC    +T+     E  D 
Sbjct: 39  EPVHEPALPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 98

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169
           M++G  P ++++  G+PF G+ G +LD ML+++ + R   ++I+ +    PPGNRN    
Sbjct: 99  MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 158

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E+  C P + RQ+ L+ PK+++ +G          D        G+          +P +
Sbjct: 159 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 213

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            T HP  L++    K   W  L       ++
Sbjct: 214 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 244


>gi|33594425|ref|NP_882069.1| bacteriophage-related DNA polymerase [Bordetella pertussis Tohama
           I]
 gi|33564500|emb|CAE43815.1| bacteriophage-related DNA polymerase [Bordetella pertussis Tohama
           I]
 gi|332383836|gb|AEE68683.1| DNA polymerase [Bordetella pertussis CS]
          Length = 298

 Score =  188 bits (476), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 56/223 (25%), Positives = 95/223 (42%), Gaps = 3/223 (1%)

Query: 36  TYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCST 95
                R  +   +A Q             + A +       L +L+ L++    C LC  
Sbjct: 76  AASPTRAPRPPVAAPQRAEPAAEADGQAARAAVAARAAGADLGQLQQLVQDCTACGLCQG 135

Query: 96  SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISM 154
               +     +    M++G  P + ++  G PF G++G +LD MLQS+ + R +   I+ 
Sbjct: 136 RRHAVFGMGAQPARWMVVGEAPGEQEDRQGLPFVGRSGKLLDAMLQSVGMSRERDVFIAN 195

Query: 155 ISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLG 214
           +    PPGNRN    E+  C P + RQI L++P+ +L +G        N +A       G
Sbjct: 196 VIKCRPPGNRNPKPEEIAACSPYLRRQIALLNPERILVLGRFAAQTLLNTEA-TIGNLRG 254

Query: 215 KWSNLCT-PHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
           +  +L T     IP + + HP  L++ P  K   W  L+   +
Sbjct: 255 RVHSLQTDEGRSIPVVVSYHPAYLLRSPAEKARAWQDLLLAAR 297


>gi|115352126|ref|YP_773965.1| phage SPO1 DNA polymerase--like protein [Burkholderia ambifaria
           AMMD]
 gi|115282114|gb|ABI87631.1| phage SPO1 DNA polymerase-related protein [Burkholderia ambifaria
           AMMD]
          Length = 367

 Score =  188 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 56/237 (23%), Positives = 92/237 (38%), Gaps = 6/237 (2%)

Query: 25  YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLL 84
                EP   A  +        D A    T       P   +  +          L + +
Sbjct: 124 DRASAEPAPFAAADDMPPATEDDFAWFDATPPGDPLPPDEARPAATPVAMLDWDTLAARV 183

Query: 85  RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIE 144
                C LC    +T+        D M+IG  P ++++  G+PF G+ G +LD MLQS+ 
Sbjct: 184 ADCTSCRLCEKRTNTVFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLLDNMLQSLA 243

Query: 145 IMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
           + R   ++I+ +    PPGNRN    E+  C P + RQ+ L+ PK+++ +G         
Sbjct: 244 LKRGENVYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVALVKPKLIVALGRFAAQTLLK 303

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            DA       G+          +P + T HP  L++    K   W  L   +   + 
Sbjct: 304 TDASIAS-LRGRVHTYE----GVPVIVTYHPAYLLRSLQDKSKAWADLCLARDTFQQ 355


>gi|77165973|ref|YP_344498.1| Phage SPO1 DNA polymerase-related protein [Nitrosococcus oceani
           ATCC 19707]
 gi|254436357|ref|ZP_05049863.1| uracil-DNA glycosylase, family 4 [Nitrosococcus oceani AFC27]
 gi|76884287|gb|ABA58968.1| Phage SPO1 DNA polymerase-related protein [Nitrosococcus oceani
           ATCC 19707]
 gi|207088047|gb|EDZ65320.1| uracil-DNA glycosylase, family 4 [Nitrosococcus oceani AFC27]
          Length = 231

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 7/220 (3%)

Query: 41  RKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI 100
           ++ +   +  +P+        PL   A+     A    EL   + S   C L      T+
Sbjct: 18  QQRQPTSTGKKPLVETGEELIPLAPSAEV----ASEWEELAVQVASCTACLLHCGRTQTV 73

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160
                +    +I+G  P   ++  G+PF G+ G +L+ ML+++ + R Q++I+ I    P
Sbjct: 74  FGVGDQAAKWLIVGEAPGVEEDRQGEPFVGRAGQLLNAMLEAVGLQRGQVYIANILKCRP 133

Query: 161 PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220
           P NR+    E+  C P + RQ+ L+ P+I+L +G         +      +  G      
Sbjct: 134 PNNRDPLPEEVAHCEPYLRRQVALLRPRIILAVGRVAGQNLLKSSLPL-GRLRGSVHQY- 191

Query: 221 TPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            P + IP + T HP  L++ P  K+  W  L    K  + 
Sbjct: 192 -PETTIPLVVTYHPAYLLRAPREKRRAWQDLQLAHKVYRE 230


>gi|124515689|gb|EAY57198.1| Uracil-DNA glycosylase, family 4 [Leptospirillum rubarum]
          Length = 243

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 2/185 (1%)

Query: 74  ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
              +  L+  +R+   C L  T    +         LM +G  P   ++ +G+PF G+ G
Sbjct: 50  PEDIDGLERFVRTCQICSLSETRNQVVFGEGRGTSGLMFVGEGPGADEDRTGRPFVGRAG 109

Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
            +L KM+Q++ + R +++I+      PPGNR  S  E   C P +  QI L+ PK ++ +
Sbjct: 110 ELLTKMIQAMGLSREEVYIANTVKCRPPGNRVPSPEERNACFPFLEAQIRLLKPKYMILL 169

Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253
           G           ++   +  G+   +   +  I  + T HP  L++ P  KK+ W  L T
Sbjct: 170 GQTATQVILK-QSEGITRIRGRCFEMP-EYPGIKMMPTYHPAYLLRNPSAKKDVWSDLQT 227

Query: 254 LKKAL 258
           +   +
Sbjct: 228 VMGWM 232


>gi|167919542|ref|ZP_02506633.1| phage SPO1 DNA polymerase domain protein [Burkholderia pseudomallei
           BCC215]
          Length = 265

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
           +P+             A + +       EL++ +     C LC    +T+     E  D 
Sbjct: 52  EPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 111

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169
           M++G  P ++++  G+PF G+ G +LD ML+++ + R   ++I+ +    PPGNRN    
Sbjct: 112 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 171

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E+  C P + RQ+ L+ PK+++ +G          D        G+          +P +
Sbjct: 172 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 226

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            T HP  L++    K   W  L       ++
Sbjct: 227 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 257


>gi|167739201|ref|ZP_02411975.1| putative phage-related DNA polymerase [Burkholderia pseudomallei
           14]
          Length = 259

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
           +P+             A + +       EL++ +     C LC    +T+     E  D 
Sbjct: 46  EPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCERCRLCEKRTNTVFGVGDEHADW 105

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169
           M++G  P ++++  G+PF G+ G +LD ML+++ + R   ++I+ +    PPGNRN    
Sbjct: 106 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 165

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E+  C P + RQ+ L+ PK+++ +G          D        G+          +P +
Sbjct: 166 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 220

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            T HP  L++    K   W  L       ++
Sbjct: 221 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 251


>gi|292490788|ref|YP_003526227.1| phage SPO1 DNA polymerase-related protein [Nitrosococcus halophilus
           Nc4]
 gi|291579383|gb|ADE13840.1| phage SPO1 DNA polymerase-related protein [Nitrosococcus halophilus
           Nc4]
          Length = 231

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 53/223 (23%), Positives = 92/223 (41%), Gaps = 9/223 (4%)

Query: 39  SQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLS 98
            QR+  + D A         +   +  +       A    EL + +     C L  +   
Sbjct: 18  RQRQSANADRAPAVEVGGVPLGENMPTEV------APGWEELAARVAGCTACSLHCSRTQ 71

Query: 99  TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158
           T+          +I+G  P   ++  G+PF G+ G +L+ ML+++ + R Q++I+ I   
Sbjct: 72  TVFGVGDREAKWLIVGEAPGADEDRQGEPFVGRAGQLLNAMLEALGLQRGQVYIANILKC 131

Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218
            PP NR+    E+  C P +  Q+ L+ P+I+L +G           A    +  G    
Sbjct: 132 RPPKNRDPLPEEVASCEPYLRHQMALLQPRIILAVGRVAGQNLLKTSAPL-GRLRGIVHK 190

Query: 219 LCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
              P + IP + T HP  L++ P  K+  W  L    K  + L
Sbjct: 191 Y--PDTTIPLVVTYHPAYLLRSPREKRRAWQDLRLALKVYREL 231


>gi|167824793|ref|ZP_02456264.1| phage SPO1 DNA polymerase domain protein [Burkholderia pseudomallei
           9]
          Length = 256

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
           +P+             A + +       EL++ +     C LC    +T+     E  D 
Sbjct: 43  EPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 102

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169
           M++G  P ++++  G+PF G+ G +LD ML+++ + R   ++I+ +    PPGNRN    
Sbjct: 103 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 162

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E+  C P + RQ+ L+ PK+++ +G          D        G+          +P +
Sbjct: 163 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 217

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            T HP  L++    K   W  L       ++
Sbjct: 218 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 248


>gi|298505240|gb|ADI83963.1| uracil-DNA glycosylase [Geobacter sulfurreducens KN400]
          Length = 243

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 90/188 (47%), Gaps = 5/188 (2%)

Query: 71  AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130
                +L +++  +   H C L +   + +         LMIIG  P   +++ G+PF G
Sbjct: 50  GDARETLDDIRREMGGCHRCALGAGRTNLVFGVGNPAARLMIIGEAPGRDEDLRGEPFVG 109

Query: 131 KTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
           + G +L K+++++   R  ++I  +    PP NR+ ++ E+E C   ++RQ++ ++P+ +
Sbjct: 110 EAGQLLTKIIEAMGFAREDVYICNVLKCRPPHNRDPASAEIEACSSFMLRQVKAVAPEAI 169

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
           L +G            +   +  G++ +       IP + T+HP  L++ P  K++ W  
Sbjct: 170 LALGTFAAQTILGTK-EPISRLRGRFHDY----HGIPLMPTLHPAFLLRNPERKRDVWDD 224

Query: 251 LITLKKAL 258
           +  +   L
Sbjct: 225 VRQVMGLL 232


>gi|56751576|ref|YP_172277.1| bacteriophage-type DNA polymerase [Synechococcus elongatus PCC
           6301]
 gi|81301352|ref|YP_401560.1| phage SPO1 DNA polymerase-related protein [Synechococcus elongatus
           PCC 7942]
 gi|56686535|dbj|BAD79757.1| DNA polymerase bacteriophage-type [Synechococcus elongatus PCC
           6301]
 gi|81170233|gb|ABB58573.1| phage SPO1 DNA polymerase-related protein [Synechococcus elongatus
           PCC 7942]
          Length = 235

 Score =  187 bits (474), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 87/224 (38%), Gaps = 11/224 (4%)

Query: 44  KSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICAT 103
            + +        +     P        A    ++ EL     +   C L  T    +   
Sbjct: 13  AAAEPVADAPATVDRAAIPTSASIPIPAGTFSTVEELLEPCNACQRCGLGQTRTHAVVGR 72

Query: 104 QTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM-RTQIHISMISPWHPPG 162
                 LM+IG  P +++++ G PF GK G +LD++L ++ +     ++I+ I    PPG
Sbjct: 73  GNPQAKLMVIGEGPGENEDLQGLPFVGKAGQLLDRILAAVSLDSNRDVYIANIVKCRPPG 132

Query: 163 NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP 222
           NR  +  EM  C P +  Q+ L+ PKI+L  G          D +   +  G W      
Sbjct: 133 NRKPTPEEMAACVPYLQEQVRLVQPKIILLAGATAVQGLLG-DKRGITKIRGLWMEWQ-- 189

Query: 223 HSIIPTLATVHPQELIQYPLI-----KKNTWHALITLKKALKNL 261
              I  +   HP  L++ P       K   W  +  +K+ L  L
Sbjct: 190 --GIACMPVFHPAYLLRNPSKEQGSPKWLMWQDIQEVKRRLDEL 231


>gi|167894904|ref|ZP_02482306.1| phage SPO1 DNA polymerase domain protein [Burkholderia pseudomallei
           7894]
          Length = 254

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
           +P+             A + +       EL++ +     C LC    +T+     E  D 
Sbjct: 41  EPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 100

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169
           M++G  P ++++  G+PF G+ G +LD ML+++ + R   ++I+ +    PPGNRN    
Sbjct: 101 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 160

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E+  C P + RQ+ L+ PK+++ +G          D        G+          +P +
Sbjct: 161 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 215

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            T HP  L++    K   W  L       ++
Sbjct: 216 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 246


>gi|157826321|ref|YP_001494041.1| N-terminus of bacteriophage-type DNA polymerase [Rickettsia akari
           str. Hartford]
 gi|157800279|gb|ABV75533.1| N-terminus of bacteriophage-type DNA polymerase [Rickettsia akari
           str. Hartford]
          Length = 329

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 58/202 (28%), Positives = 103/202 (50%), Gaps = 4/202 (1%)

Query: 62  PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121
             +  A S+A KA ++ ELK  L +F+ C L   + +T+         +M+IG  P  ++
Sbjct: 123 DNITLARSLADKANNIAELKESLLNFNGCALKKFATNTVFGDGNLEAKIMLIGEAPGITE 182

Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMR 180
           ++ G PF G++GN+LD ML +I I R    +I+    W PP NR  +  E++IC+P + +
Sbjct: 183 DLKGIPFCGESGNLLDNMLHAIGISRKNNAYITNTVFWRPPANRQPTLEEVDICKPFVEK 242

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT--LATVHPQELI 238
            I LISP +++ +G+               +   ++      +   P    A  HP  L+
Sbjct: 243 HIALISPTLIILVGSTAATSLLG-KNSGITKIRQEYYFYTNKYLSAPIQTTAIFHPAYLL 301

Query: 239 QYPLIKKNTWHALITLKKALKN 260
           + P+ K+ +W+ L+ +K+ L N
Sbjct: 302 RQPMQKRTSWYDLLKIKEYLVN 323


>gi|152990436|ref|YP_001356158.1| uracil-DNA glycosylase [Nitratiruptor sp. SB155-2]
 gi|151422297|dbj|BAF69801.1| uracil-DNA glycosylase [Nitratiruptor sp. SB155-2]
          Length = 195

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 51/186 (27%), Positives = 94/186 (50%), Gaps = 6/186 (3%)

Query: 74  ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
              L  L++++   H C L  T  + +         LM IG  P  +++ +G+PF G+ G
Sbjct: 15  PNDLEALRAIVLECHLCDLSKTRKNVVFGEGNPHAKLMFIGEGPGATEDETGRPFVGRAG 74

Query: 134 NMLDKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192
            +L KM++++ EI R++++I+ I    PP NR  +  E + C P + +QIE+I+P+IL+ 
Sbjct: 75  QLLTKMIENVLEIPRSEVYIANIVKCRPPNNRVPTPQEAQTCIPYLFKQIEIINPEILVA 134

Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
           +G  +  +    D     +  G+  +          + T HP  L++ P  KK  +  L+
Sbjct: 135 LGATSYRWLTG-DNTPISKVRGQVISF----RGKKLIPTFHPSYLLRNPSKKKEAYEDLL 189

Query: 253 TLKKAL 258
            +K+ L
Sbjct: 190 KIKEML 195


>gi|217421553|ref|ZP_03453057.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 576]
 gi|217395295|gb|EEC35313.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 576]
          Length = 457

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
           +P+             A + +       EL++ +     C LC    +T+     E  D 
Sbjct: 244 EPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCERCRLCEKRTNTVFGVGDEHADW 303

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169
           M++G  P ++++  G+PF G+ G +LD ML+++ + R   ++I+ +    PPGNRN    
Sbjct: 304 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 363

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E+  C P + RQ+ L+ PK+++ +G          D        G+          +P +
Sbjct: 364 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 418

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            T HP  L++    K   W  L       ++
Sbjct: 419 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 449


>gi|172060990|ref|YP_001808642.1| phage SPO1 DNA polymerase-related protein [Burkholderia ambifaria
           MC40-6]
 gi|171993507|gb|ACB64426.1| phage SPO1 DNA polymerase-related protein [Burkholderia ambifaria
           MC40-6]
          Length = 345

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 56/232 (24%), Positives = 92/232 (39%), Gaps = 6/232 (2%)

Query: 30  EPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHD 89
           EP   A  +        D A    T       P   +  +          L + +     
Sbjct: 107 EPAPSAAADDMPPATEDDFAWFDATPPGEPLPPDEARPAATPVAMLDWDTLAARVADCTS 166

Query: 90  CHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-T 148
           C LC    +T+        D M+IG  P ++++  G+PF G+ G +LD MLQS+ + R  
Sbjct: 167 CRLCEKRTNTVFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLLDNMLQSLALKRGE 226

Query: 149 QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQK 208
            ++I+ +    PPGNRN    E+  C P + RQ+ L+ PK+++ +G          DA  
Sbjct: 227 NVYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDASI 286

Query: 209 TYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
                G+          +P + T HP  L++    K   W  L   +   + 
Sbjct: 287 AS-LRGRVHTYE----GVPVIVTYHPAYLLRSLQDKSKAWADLCLARDTFQQ 333


>gi|167846322|ref|ZP_02471830.1| putative phage-related DNA polymerase [Burkholderia pseudomallei
           B7210]
          Length = 263

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
           +P+             A + +       EL++ +     C LC    +T+     E  D 
Sbjct: 50  EPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCERCRLCEKRTNTVFGVGDEHADW 109

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169
           M++G  P ++++  G+PF G+ G +LD ML+++ + R   ++I+ +    PPGNRN    
Sbjct: 110 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCWPPGNRNPEPD 169

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E+  C P + RQ+ L+ PK+++ +G          D        G+          +P +
Sbjct: 170 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 224

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            T HP  L++    K   W  L       ++
Sbjct: 225 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 255


>gi|300691643|ref|YP_003752638.1| uracil-DNA glycosylase,phage-related protein [Ralstonia
           solanacearum PSI07]
 gi|299078703|emb|CBJ51362.1| uracil-DNA glycosylase,phage-related protein [Ralstonia
           solanacearum PSI07]
          Length = 273

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 55/233 (23%), Positives = 93/233 (39%), Gaps = 8/233 (3%)

Query: 29  DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFH 88
           D P           E     A              + +A  IA  A    +L++ +    
Sbjct: 44  DAPAPLIEPPVAVAEVVPPVAPAAAPVAEIPADSALPRAQRIA--AFDWAQLEAAVSGCT 101

Query: 89  DCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRT 148
            C LC     T+        D M+IG  P + ++  G+PF G+ G +LD ML++I + R 
Sbjct: 102 ACKLCERRTQTVFGVGDRQADWMLIGEAPGEQEDRQGEPFVGQAGKLLDSMLRAIGLSRE 161

Query: 149 Q-IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207
           + + I+ +    PPGNR+    E+ +C P + RQI L+ P++++ +G             
Sbjct: 162 RGVFIANVLKCRPPGNRDPEPDEVAMCDPYLKRQIALVKPRVIIVLGRFAAQSLLQ-TQT 220

Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
              +  GK   +      +P + T HP  L++    K   W  L   +K    
Sbjct: 221 PVGKLRGKVHEV----DGVPVVVTYHPAYLLRTLTDKARAWEDLCLARKVYAE 269


>gi|83748580|ref|ZP_00945600.1| Uracil DNA glycosylase superfamily protein [Ralstonia solanacearum
           UW551]
 gi|83724788|gb|EAP71946.1| Uracil DNA glycosylase superfamily protein [Ralstonia solanacearum
           UW551]
          Length = 277

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 52/241 (21%), Positives = 95/241 (39%), Gaps = 11/241 (4%)

Query: 26  WVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSP-----LVQQADSIAQKACSLHEL 80
            V DEP          + + + S  +P                 +   +    A    +L
Sbjct: 38  AVADEPAPFIIEPPVIEPRVVVSEAEPPPMAPPAAPVADIPVAPELPRAQRIAAFDWAQL 97

Query: 81  KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML 140
           ++ +     C LC     T+        D M+IG  P + ++  G+PF G+ G +LD ML
Sbjct: 98  EAAVSGCTACKLCERRTQTVFGVGDRQADWMLIGEAPGEQEDRQGEPFVGQAGKLLDSML 157

Query: 141 QSIEIMRTQ-IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199
           +++ + R   + I+ +    PPGNR+    E+ +C P + RQI L+ P++++ +G     
Sbjct: 158 RAVGLSRETGVFIANVLKCRPPGNRDPEPDEVAMCDPYLKRQIALVKPRVIIVLGRFAAQ 217

Query: 200 FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
                      +  G+   +      +P + T HP  L++    K   W  L   +K   
Sbjct: 218 SLLQ-TQTPVGKLRGRVHEV----DGVPVVVTYHPAYLLRTLTDKARAWEDLCLARKVYA 272

Query: 260 N 260
            
Sbjct: 273 E 273


>gi|53723916|ref|YP_103220.1| phage SPO1 DNA polymerase domain-containing protein [Burkholderia
           mallei ATCC 23344]
 gi|52427339|gb|AAU47932.1| phage SPO1 DNA polymerase domain protein [Burkholderia mallei ATCC
           23344]
          Length = 220

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
           +P+             A + +       EL++ +     C LC    +T+     E  D 
Sbjct: 7   EPVHEPALPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 66

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169
           M++G  P ++++  G+PF G+ G +LD ML+++ + R   ++I+ +    PPGNRN    
Sbjct: 67  MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 126

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E+  C P + RQ+ L+ PK+++ +G          D        G+          +P +
Sbjct: 127 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 181

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            T HP  L++    K   W  L       ++
Sbjct: 182 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 212


>gi|325981465|ref|YP_004293867.1| phage SPO1 DNA polymerase-like protein [Nitrosomonas sp. AL212]
 gi|325530984|gb|ADZ25705.1| phage SPO1 DNA polymerase-related protein [Nitrosomonas sp. AL212]
          Length = 251

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 6/210 (2%)

Query: 53  ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMI 112
               ++              ++  + +LK  +     C L  T   T+  T  +    + 
Sbjct: 33  PAPSKNEDITSSFTHKENLGQSKEIDQLKLAVSHCTACPLSKTRTHTVFGTGDKNASWLF 92

Query: 113 IGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEM 171
           +G  P   ++ +G+PF G+ G +LD+ML +I++ R  + +I+ I    PP NRN S  E 
Sbjct: 93  VGEGPGAREDETGEPFVGQAGKLLDQMLFAIQLNRRHMIYITNIVKCRPPNNRNPSTYEA 152

Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231
             C P + +QI LI PKI++ +G          D        GK  +     S IP + T
Sbjct: 153 AQCEPFLTQQIALIKPKIIIALGKVAAQSLLKCD-NSISSLRGKIHDY----SGIPLIVT 207

Query: 232 VHPQELIQYPLIKKNTWHALITLKKALKNL 261
            HP  L++    K   W  L   +  + +L
Sbjct: 208 YHPAYLLRSLPEKAKAWRDLCFARSVMGSL 237


>gi|167911532|ref|ZP_02498623.1| phage SPO1 DNA polymerase domain protein [Burkholderia pseudomallei
           112]
          Length = 261

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
           +P+             A + +       EL++ +     C LC    +T+     E  D 
Sbjct: 48  EPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 107

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169
           M++G  P ++++  G+PF G+ G +LD ML+++ + R   ++I+ +    PPGNRN    
Sbjct: 108 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 167

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E+  C P + RQ+ L+ PK+++ +G          D        G+          +P +
Sbjct: 168 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 222

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            T HP  L++    K   W  L       ++
Sbjct: 223 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 253


>gi|254197195|ref|ZP_04903617.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei S13]
 gi|169653936|gb|EDS86629.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei S13]
          Length = 455

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
           +P+             A + +       EL++ +     C LC    +T+     E  D 
Sbjct: 242 EPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCERCRLCEKRTNTVFGVGDEHADW 301

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169
           M++G  P ++++  G+PF G+ G +LD ML+++ + R   ++I+ +    PPGNRN    
Sbjct: 302 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 361

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E+  C P + RQ+ L+ PK+++ +G          D        G+          +P +
Sbjct: 362 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 416

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            T HP  L++    K   W  L       ++
Sbjct: 417 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 447


>gi|39996228|ref|NP_952179.1| phage shock protein E [Geobacter sulfurreducens PCA]
 gi|39982993|gb|AAR34452.1| phage SPO1 DNA polymerase-related protein [Geobacter sulfurreducens
           PCA]
          Length = 235

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 90/188 (47%), Gaps = 5/188 (2%)

Query: 71  AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130
                +L +++  +   H C L +   + +         LMIIG  P   +++ G+PF G
Sbjct: 42  GDARETLDDIRREMGGCHRCALGAGRTNLVFGVGNPAARLMIIGEAPGRDEDLRGEPFVG 101

Query: 131 KTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
           + G +L K+++++   R  ++I  +    PP NR+ ++ E+E C   ++RQ++ ++P+ +
Sbjct: 102 EAGQLLTKIIEAMGFAREDVYICNVLKCRPPHNRDPASAEIEACSSFMLRQVKAVAPEAI 161

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
           L +G            +   +  G++ +       IP + T+HP  L++ P  K++ W  
Sbjct: 162 LALGTFAAQTILGTK-EPISRLRGRFHDY----HGIPLMPTLHPAFLLRNPERKRDVWDD 216

Query: 251 LITLKKAL 258
           +  +   L
Sbjct: 217 VRQVMGLL 224


>gi|207723323|ref|YP_002253722.1| uracil-dna glycosylase-related protein [Ralstonia solanacearum
           MolK2]
 gi|206588521|emb|CAQ35484.1| uracil-dna glycosylase-related protein [Ralstonia solanacearum
           MolK2]
          Length = 280

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 56/243 (23%), Positives = 100/243 (41%), Gaps = 15/243 (6%)

Query: 26  WVFDEPNNEATYESQRKEKSIDSAIQPITNIRH-------IHSPLVQQADSIAQKACSLH 78
            V DEP          + + + S  +P               +P + +A  IA  A    
Sbjct: 41  AVADEPAPLVIEPPVIEPRVVVSEAEPPPMAPPAASVADIPVAPELPRAQRIA--AFDWA 98

Query: 79  ELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDK 138
           +L++ +     C LC     T+        D M+IG  P + ++  G+PF G+ G +LD 
Sbjct: 99  QLEAAVSGCTACKLCERRTQTVFGVGDRQADWMLIGEAPGEQEDRQGEPFVGQAGKLLDS 158

Query: 139 MLQSIEIMRTQ-IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197
           ML+++ + R   + I+ +    PPGNR+    E+ +C P + RQI L+ P++++ +G   
Sbjct: 159 MLRAVGLSRETGVFIANVLKCRPPGNRDPEPDEVTMCDPYLKRQIALVKPRVIIVLGRFA 218

Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKA 257
                        +  G+   +      +P + T HP  L++    K   W  L   +K 
Sbjct: 219 AQSLLQ-TQTPVGKLRGRVHEV----DGVPVVVTYHPAYLLRTLTDKARAWEDLCLARKV 273

Query: 258 LKN 260
              
Sbjct: 274 YAE 276


>gi|332297808|ref|YP_004439730.1| phage SPO1 DNA polymerase-related protein [Treponema brennaborense
           DSM 12168]
 gi|332180911|gb|AEE16599.1| phage SPO1 DNA polymerase-related protein [Treponema brennaborense
           DSM 12168]
          Length = 258

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 6/207 (2%)

Query: 56  IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115
                      AD++ + A +L  +   +     C LC T  +T+         +M+IG 
Sbjct: 43  PPQPSVRAAVAADTLPETAAALERIVQKIAGCTRCQLCKTRKNTVPGIGVPNPAVMVIGE 102

Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEIC 174
            P   ++ SG PF G+ G +LDKML SI + R T  +I+ I    PPGNR+    E E C
Sbjct: 103 GPGADEDASGIPFVGRAGQLLDKMLASISLSRTTNCYIANIVKCRPPGNRDPLPEESEAC 162

Query: 175 RPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHP 234
              +  QI L+ P  +L +G                +  GK++        IP LAT HP
Sbjct: 163 AAFLEAQISLLKPAAILAVGRVAAQNLLK-TTVGIGKLRGKFTEYN----GIPFLATYHP 217

Query: 235 QELIQYPLIKKNTWHALITLKKALKNL 261
             L++   +K+  W  L   +  L+ L
Sbjct: 218 SALLRNEDLKRPAWEDLKLFRSGLQQL 244


>gi|319957234|ref|YP_004168497.1| phage spo1 DNA polymerase-related protein [Nitratifractor
           salsuginis DSM 16511]
 gi|319419638|gb|ADV46748.1| phage SPO1 DNA polymerase-related protein [Nitratifractor
           salsuginis DSM 16511]
          Length = 222

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 53/194 (27%), Positives = 92/194 (47%), Gaps = 6/194 (3%)

Query: 68  DSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127
              AQ    L EL+ L+   H C L  +    +         LM +G  P  +++ +G+P
Sbjct: 33  PEPAQLPDDLEELRRLVEQCHLCDLAKSRHKVVFGEGDPHARLMFVGEGPGATEDQTGRP 92

Query: 128 FSGKTGNMLDKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186
           F G+ G +L +M++++  + R +++I+ I    PPGNR  +  E   CRP +++QIE+I 
Sbjct: 93  FVGRAGELLTRMIENVLHLRREEVYIANIVKCRPPGNRVPTPTEAFTCRPYLLKQIEIIR 152

Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKN 246
           P+I++ +G      +  ND     +  G              + T HP  L++ P  KK 
Sbjct: 153 PRIIMTLGATAYR-YLTNDETPISRVRGHIIQSDH----YTLVPTFHPSYLLRNPSAKKQ 207

Query: 247 TWHALITLKKALKN 260
            W  L+ +K  L+ 
Sbjct: 208 AWEDLLKVKALLEK 221


>gi|198284582|ref|YP_002220903.1| phage SPO1 DNA polymerase-like protein [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218667172|ref|YP_002427251.1| uracil-DNA glycosylase family 4 protein [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|198249103|gb|ACH84696.1| phage SPO1 DNA polymerase-related protein [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218519385|gb|ACK79971.1| uracil-DNA glycosylase family 4 protein [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 308

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 48/228 (21%), Positives = 84/228 (36%), Gaps = 6/228 (2%)

Query: 35  ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94
               S        S   P           V+   +         +L +++ +   C L  
Sbjct: 84  TALPSSGTAPIPVSGTPPPVPADQASVTAVEAHRTARIATLDWRDLSNMVSTCQACPLGQ 143

Query: 95  TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HIS 153
           T    +          + +G  P   ++  G+ F G+ G +LD MLQ++ + R +  +I+
Sbjct: 144 TRKHAVFGAGNPHGSWLFVGEAPGAEEDRRGEAFVGRAGQLLDNMLQAMGLSRDKDAYIA 203

Query: 154 MISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL 213
            I    PP NR+    E+  C P + RQI L+ P++++ +G          +     Q  
Sbjct: 204 NILKCRPPNNRDPLGPEVHACTPYLQRQIALLQPRVIVALGRFAAQGLLQVNTPL-SQLR 262

Query: 214 GKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
           G           IP + T HP  L++ P+ K+  W  L         L
Sbjct: 263 GT----TQHFQGIPLIVTYHPAYLLRNPIDKRKVWEDLKRALGVFAEL 306


>gi|167563217|ref|ZP_02356133.1| putative phage-related DNA polymerase [Burkholderia oklahomensis
           EO147]
          Length = 253

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 6/207 (2%)

Query: 55  NIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIG 114
                 +     A   +       EL++ +     C LC    +T+     E  D M+IG
Sbjct: 44  PALPDVAAKPAAASEPSVAELGWDELRARVADCRRCRLCEKRTNTVFGVGDERADWMLIG 103

Query: 115 YTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEI 173
             P ++++  G+PF G+ G +LD ML+++ + R   ++I+ +    PPGNRN    E+  
Sbjct: 104 EAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPDEVAR 163

Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
           C P + RQ+ L+ PK+++ +G          DA       G+          +P + T H
Sbjct: 164 CEPYLQRQVALVKPKLIVALGRFAAQTLLKTDASIAS-MRGRVHQYE----GVPVIVTYH 218

Query: 234 PQELIQYPLIKKNTWHALITLKKALKN 260
           P  L++    K   W  L     A +N
Sbjct: 219 PAYLLRSLQDKAKAWSDLCLANDAYRN 245


>gi|126728290|ref|ZP_01744106.1| uracil-DNA glycosylase [Sagittula stellata E-37]
 gi|126711255|gb|EBA10305.1| uracil-DNA glycosylase [Sagittula stellata E-37]
          Length = 258

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 60/263 (22%), Positives = 111/263 (42%), Gaps = 10/263 (3%)

Query: 3   SKRILSQEQILTIALFYADSGV-YWVFDEPNNEATYESQRKEKSIDSAIQPITN--IRHI 59
            +  L          +  + GV   + + P +    E   K + +           +   
Sbjct: 1   MESALDWHAARAALDWQLEMGVSETLCEAPVDRFALEDAVKAERLAPRRGAAGAAPVAEP 60

Query: 60  HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSD 119
               V +A + A  A  L  L + L ++  C L   + S + +       +M++G  P  
Sbjct: 61  EVDPVAEAQAAAAAAPDLPALAAALAAYDHCELKRGARSLVFSDGAAAARVMLVGEAPGR 120

Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPII 178
            +++ GKPF G+ G +LD+ML ++ + R +  +I+ + PW PP NR+    E+ +  P +
Sbjct: 121 DEDLQGKPFVGRAGQLLDRMLAAVGLSRDESVYITNVLPWRPPQNRDPKPDEIAMMLPFL 180

Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238
            + I L+ P +L+ +GN +             +  G W          P L  VHP  L+
Sbjct: 181 KKHIALVDPDLLVIVGNISAQALLGRRG--ITRLRGTWQEAE----GRPALPMVHPAYLL 234

Query: 239 QYPLIKKNTWHALITLKKALKNL 261
           + P  K+  W+ ++ LK  L+ L
Sbjct: 235 RNPGFKREAWNDMLELKVKLRTL 257


>gi|114331290|ref|YP_747512.1| phage SPO1 DNA polymerase-related protein [Nitrosomonas eutropha
           C91]
 gi|114308304|gb|ABI59547.1| phage SPO1 DNA polymerase-related protein [Nitrosomonas eutropha
           C91]
          Length = 245

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 61/223 (27%), Positives = 100/223 (44%), Gaps = 6/223 (2%)

Query: 40  QRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLST 99
           Q   +S DS   P  +        +    S      +  +L+ ++ S   C LC T   T
Sbjct: 25  QPSVQSSDSKENPAAHTETAVESSIVDDRSALIARANWEQLRQMVSSCTACPLCQTRKQT 84

Query: 100 ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQ-IHISMISPW 158
           +     E  D + IG  P   +++ G+PF G+ G +LD MLQ+I++ R Q ++I+ I   
Sbjct: 85  VFGVGDEQADWLFIGEGPGAREDLLGEPFVGQAGKLLDSMLQAIDLGREQGVYIANIVKC 144

Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218
            PP NRN   +E + CRP ++RQI LI P++++ +G                   G+   
Sbjct: 145 RPPDNRNPLEMEAQQCRPYLLRQIALIQPRLIITLGKVAAQNLLA-TGDSIASLRGRLHE 203

Query: 219 LCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
                  IP +AT HP  L++    K   W  L   ++ ++ L
Sbjct: 204 FA----GIPLIATYHPAYLLRSLTDKAKAWEDLCFARRTMQAL 242


>gi|323706586|ref|ZP_08118137.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323534064|gb|EGB23864.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 187

 Score =  186 bits (471), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 5/183 (2%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L EL     +   C L +   + +         +M +G  P   +++ G+PF GK G +L
Sbjct: 6   LKELIEQCMNCTKCPLHNVRNNVVFGEGNLRSKIMFVGEGPGRDEDLQGRPFVGKAGQLL 65

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           +KML++I + R  ++I+ I    PP NR     E++ C P +  Q+ +I+PKI++ +G  
Sbjct: 66  NKMLEAINLKREDVYIANIVKCRPPNNRVPLQSEVDACLPYLRNQVAIIAPKIIVCLGAT 125

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                 + D  K     G+W         +  +AT HP  L++ P  K   W    +++ 
Sbjct: 126 AAKAIIDKD-FKITAMRGQWFE----KKGVKIIATYHPAALLRDPEKKYPAWEDFKSIRD 180

Query: 257 ALK 259
            L 
Sbjct: 181 ELD 183


>gi|166999677|ref|ZP_02265512.1| uracil-DNA glycosylase, family 4 [Burkholderia mallei PRL-20]
 gi|243064327|gb|EES46513.1| uracil-DNA glycosylase, family 4 [Burkholderia mallei PRL-20]
          Length = 461

 Score =  186 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
           +P+             A + +       EL++ +     C LC    +T+     E  D 
Sbjct: 248 EPVHEPALPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 307

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169
           M++G  P ++++  G+PF G+ G +LD ML+++ + R   ++I+ +    PPGNRN    
Sbjct: 308 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 367

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E+  C P + RQ+ L+ PK+++ +G          D        G+          +P +
Sbjct: 368 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 422

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            T HP  L++    K   W  L       ++
Sbjct: 423 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 453


>gi|254178558|ref|ZP_04885213.1| uracil-DNA glycosylase, family 4 [Burkholderia mallei ATCC 10399]
 gi|160699597|gb|EDP89567.1| uracil-DNA glycosylase, family 4 [Burkholderia mallei ATCC 10399]
          Length = 452

 Score =  186 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
           +P+             A + +       EL++ +     C LC    +T+     E  D 
Sbjct: 239 EPVHEPALPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 298

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169
           M++G  P ++++  G+PF G+ G +LD ML+++ + R   ++I+ +    PPGNRN    
Sbjct: 299 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 358

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E+  C P + RQ+ L+ PK+++ +G          D        G+          +P +
Sbjct: 359 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 413

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            T HP  L++    K   W  L       ++
Sbjct: 414 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 444


>gi|254358080|ref|ZP_04974353.1| uracil-DNA glycosylase, family 4 [Burkholderia mallei 2002721280]
 gi|148027207|gb|EDK85228.1| uracil-DNA glycosylase, family 4 [Burkholderia mallei 2002721280]
          Length = 458

 Score =  186 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
           +P+             A + +       EL++ +     C LC    +T+     E  D 
Sbjct: 245 EPVHEPALPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 304

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169
           M++G  P ++++  G+PF G+ G +LD ML+++ + R   ++I+ +    PPGNRN    
Sbjct: 305 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 364

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E+  C P + RQ+ L+ PK+++ +G          D        G+          +P +
Sbjct: 365 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 419

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            T HP  L++    K   W  L       ++
Sbjct: 420 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 450


>gi|121599419|ref|YP_993398.1| phage SPO1 DNA polymerase domain-containing protein [Burkholderia
           mallei SAVP1]
 gi|124385331|ref|YP_001029166.1| phage SPO1 DNA polymerase domain-containing protein [Burkholderia
           mallei NCTC 10229]
 gi|126451029|ref|YP_001080906.1| uracil-DNA glycosylase [Burkholderia mallei NCTC 10247]
 gi|121228229|gb|ABM50747.1| phage SPO1 DNA polymerase domain protein [Burkholderia mallei
           SAVP1]
 gi|124293351|gb|ABN02620.1| phage SPO1 DNA polymerase domain protein [Burkholderia mallei NCTC
           10229]
 gi|126243899|gb|ABO06992.1| uracil-DNA glycosylase, family 4 [Burkholderia mallei NCTC 10247]
          Length = 455

 Score =  186 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
           +P+             A + +       EL++ +     C LC    +T+     E  D 
Sbjct: 242 EPVHEPALPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 301

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169
           M++G  P ++++  G+PF G+ G +LD ML+++ + R   ++I+ +    PPGNRN    
Sbjct: 302 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 361

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E+  C P + RQ+ L+ PK+++ +G          D        G+          +P +
Sbjct: 362 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 416

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            T HP  L++    K   W  L       ++
Sbjct: 417 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 447


>gi|134277251|ref|ZP_01763966.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 305]
 gi|134250901|gb|EBA50980.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 305]
          Length = 453

 Score =  186 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
           +P+             A + +       EL++ +     C LC    +T+     E  D 
Sbjct: 240 EPVHEPALPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 299

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169
           M++G  P ++++  G+PF G+ G +LD ML+++ + R   ++I+ +    PPGNRN    
Sbjct: 300 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 359

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E+  C P + RQ+ L+ PK+++ +G          D        G+          +P +
Sbjct: 360 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 414

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            T HP  L++    K   W  L       ++
Sbjct: 415 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 445


>gi|171319311|ref|ZP_02908424.1| phage SPO1 DNA polymerase-related protein [Burkholderia ambifaria
           MEX-5]
 gi|171095493|gb|EDT40460.1| phage SPO1 DNA polymerase-related protein [Burkholderia ambifaria
           MEX-5]
          Length = 229

 Score =  186 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 53/222 (23%), Positives = 88/222 (39%), Gaps = 6/222 (2%)

Query: 40  QRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLST 99
                  D A            P   +A +          L + +     C LC    +T
Sbjct: 1   MPPATEDDFAWFDAAPPGDPLPPDESRAAATPVAMLDWDTLAARVADCTSCRLCEKRTNT 60

Query: 100 ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPW 158
           +        D M+IG  P ++++  G+PF G+ G +LD MLQS+ + R   ++I+ +   
Sbjct: 61  VFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLLDNMLQSLALKRGENVYIANVIKC 120

Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218
            PPGNRN    E+  C P + RQ+ L+ PK+++ +G          DA       G+   
Sbjct: 121 RPPGNRNPEPDEVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDASIAS-LRGRVHT 179

Query: 219 LCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
                  +P + T HP  L++    K   W  L   +   + 
Sbjct: 180 YE----GVPVIVTYHPAYLLRSLQDKSKAWADLCLARDTFQQ 217


>gi|262198188|ref|YP_003269397.1| phage SPO1 DNA polymerase-related protein [Haliangium ochraceum DSM
           14365]
 gi|262081535|gb|ACY17504.1| phage SPO1 DNA polymerase-related protein [Haliangium ochraceum DSM
           14365]
          Length = 380

 Score =  186 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 48/229 (20%), Positives = 95/229 (41%), Gaps = 11/229 (4%)

Query: 33  NEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHL 92
           +     +        +A +P+        P  +          +L ++++ L     C L
Sbjct: 153 DRDRDRTAAARPPESAAHEPLAREPAAREPAPRPQR------RTLTDVRATLGDCQRCKL 206

Query: 93  CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHI 152
            S   + +         LM +G  P   ++  G+PF G  G +LDKM+ ++   R  ++I
Sbjct: 207 ASGRENIVFGVGDPRAALMFVGEAPGFHEDRRGEPFVGNAGELLDKMIAAMGWTRDTVYI 266

Query: 153 SMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN 212
           + +    PP NR+    E+  C+P +  QI+ ++P+IL+ +G    +             
Sbjct: 267 ANVLKCRPPNNRDPQPDEIAACQPFLAEQIDAVAPRILVTLGRPAAH-LLLQTTAPMSAL 325

Query: 213 LGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
            G++         +  + T HP  L++ P  K++TW+ L  +   L+ L
Sbjct: 326 RGRFQEY----RGVRVMPTFHPAFLLRRPERKRDTWNDLKLVIAELERL 370


>gi|134300898|ref|YP_001114394.1| phage SPO1 DNA polymerase-like protein [Desulfotomaculum reducens
           MI-1]
 gi|134053598|gb|ABO51569.1| phage SPO1 DNA polymerase-related protein [Desulfotomaculum
           reducens MI-1]
          Length = 187

 Score =  185 bits (470), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 4/186 (2%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           SL +L   +++   C L       +         LM+IG  P   ++  G PF G+ G +
Sbjct: 2   SLEQLAKDMQNCTRCGLSEGRNKLVFGVGNPKAKLMLIGEGPGKDEDEQGVPFVGRAGQL 61

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           LD++L +I++ R  ++I+ I    PP NR  + +E + C P + RQIELI P+I++ +GN
Sbjct: 62  LDRILAAIDLTREDVYIANIVKCRPPNNRVPNRVEAKACLPYLYRQIELIQPQIIVLLGN 121

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
                    DA +  +  G+W    +    I  +AT HP  +++ P  ++  W     ++
Sbjct: 122 TALQNLIGPDA-RITKMRGQWLESQS---GIKIIATYHPAAVLRDPNRRRPVWEDFQMVQ 177

Query: 256 KALKNL 261
           +    L
Sbjct: 178 EEYHKL 183


>gi|126438636|ref|YP_001059495.1| uracil-DNA glycosylase [Burkholderia pseudomallei 668]
 gi|126218129|gb|ABN81635.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 668]
          Length = 455

 Score =  185 bits (470), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
           +P+             A + +       EL++ +     C LC    +T+     E  D 
Sbjct: 242 EPVHEPALPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 301

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169
           M++G  P ++++  G+PF G+ G +LD ML+++ + R   ++I+ +    PPGNRN    
Sbjct: 302 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 361

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E+  C P + RQ+ L+ PK+++ +G          D        G+          +P +
Sbjct: 362 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 416

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            T HP  L++    K   W  L       ++
Sbjct: 417 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 447


>gi|126454213|ref|YP_001066778.1| uracil-DNA glycosylase [Burkholderia pseudomallei 1106a]
 gi|242316127|ref|ZP_04815143.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 1106b]
 gi|126227855|gb|ABN91395.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 1106a]
 gi|242139366|gb|EES25768.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 1106b]
          Length = 455

 Score =  185 bits (470), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
           +P+             A + +       EL++ +     C LC    +T+     E  D 
Sbjct: 242 EPVHEPALPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 301

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169
           M++G  P ++++  G+PF G+ G +LD ML+++ + R   ++I+ +    PPGNRN    
Sbjct: 302 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 361

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E+  C P + RQ+ L+ PK+++ +G          D        G+          +P +
Sbjct: 362 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 416

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            T HP  L++    K   W  L       ++
Sbjct: 417 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 447


>gi|254189318|ref|ZP_04895829.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei Pasteur
           52237]
 gi|157936997|gb|EDO92667.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei Pasteur
           52237]
          Length = 476

 Score =  185 bits (470), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
           +P+             A + +       EL++ +     C LC    +T+     E  D 
Sbjct: 263 EPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 322

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169
           M++G  P ++++  G+PF G+ G +LD ML+++ + R   ++I+ +    PPGNRN    
Sbjct: 323 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 382

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E+  C P + RQ+ L+ PK+++ +G          D        G+          +P +
Sbjct: 383 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 437

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            T HP  L++    K   W  L       ++
Sbjct: 438 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 468


>gi|254297183|ref|ZP_04964636.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 406e]
 gi|157807234|gb|EDO84404.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 406e]
          Length = 464

 Score =  185 bits (470), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
           +P+             A + +       EL++ +     C LC    +T+     E  D 
Sbjct: 251 EPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 310

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169
           M++G  P ++++  G+PF G+ G +LD ML+++ + R   ++I+ +    PPGNRN    
Sbjct: 311 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 370

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E+  C P + RQ+ L+ PK+++ +G          D        G+          +P +
Sbjct: 371 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 425

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            T HP  L++    K   W  L       ++
Sbjct: 426 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 456


>gi|76811418|ref|YP_334000.1| phage SPO1 DNA polymerase domain-containing protein [Burkholderia
           pseudomallei 1710b]
 gi|254261802|ref|ZP_04952856.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 1710a]
 gi|76580871|gb|ABA50346.1| phage SPO1 DNA polymerase domain protein [Burkholderia pseudomallei
           1710b]
 gi|254220491|gb|EET09875.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 1710a]
          Length = 468

 Score =  185 bits (470), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
           +P+             A + +       EL++ +     C LC    +T+     E  D 
Sbjct: 255 EPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 314

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169
           M++G  P ++++  G+PF G+ G +LD ML+++ + R   ++I+ +    PPGNRN    
Sbjct: 315 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 374

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E+  C P + RQ+ L+ PK+++ +G          D        G+          +P +
Sbjct: 375 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 429

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            T HP  L++    K   W  L       ++
Sbjct: 430 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 460


>gi|296134223|ref|YP_003641470.1| phage SPO1 DNA polymerase-related protein [Thermincola sp. JR]
 gi|296032801|gb|ADG83569.1| phage SPO1 DNA polymerase-related protein [Thermincola potens JR]
          Length = 197

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 5/193 (2%)

Query: 69  SIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128
           +  +    L +L  L R    C L +     +        DLM IG  P   ++  G PF
Sbjct: 8   AAIENCSDLEQLSLLARDCCRCGLRAGCRGVVFGKGNPDADLMFIGEGPGAEEDRQGLPF 67

Query: 129 SGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188
            G  G +LDK++ +      +++I+ I    PPGNR  +  E + C+P + +QI LI PK
Sbjct: 68  VGAAGQLLDKIILAGGWQLNEVYIANIVKCRPPGNRTPAPQEADACKPWLEKQIALIKPK 127

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW 248
           I++ +G+       +    +  ++ G+W       + I  + T HP  L++ P  K+  W
Sbjct: 128 IIVLLGSVAIQNIID-RGARITRDRGRWYE----KNGIRIMPTFHPAALLRDPAKKRPVW 182

Query: 249 HALITLKKALKNL 261
             +  ++    +L
Sbjct: 183 EDIKKVRALYDSL 195


>gi|237812834|ref|YP_002897285.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei
           MSHR346]
 gi|237502848|gb|ACQ95166.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei
           MSHR346]
          Length = 468

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
           +P+             A + +       EL++ +     C LC    +T+     E  D 
Sbjct: 255 EPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 314

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169
           M++G  P ++++  G+PF G+ G +LD ML+++ + R   ++I+ +    PPGNRN    
Sbjct: 315 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 374

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E+  C P + RQ+ L+ PK+++ +G          D        G+          +P +
Sbjct: 375 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 429

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            T HP  L++    K   W  L       ++
Sbjct: 430 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 460


>gi|254247860|ref|ZP_04941181.1| Uracil-DNA glycosylase [Burkholderia cenocepacia PC184]
 gi|124872636|gb|EAY64352.1| Uracil-DNA glycosylase [Burkholderia cenocepacia PC184]
          Length = 343

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 56/257 (21%), Positives = 92/257 (35%), Gaps = 22/257 (8%)

Query: 20  ADSGVYW----VFDEPNNEATYESQRKEKSIDSAI------------QPITNIRHIHSPL 63
            D+GV        D P   A   +          +                         
Sbjct: 79  RDAGVSAHGLVEGDRPPVRAASPASTDTMPPKDDVPPAADDDFAWFDAAPPGESVPVPLA 138

Query: 64  VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123
             +             L + +     C LC    +T+        D M+IG  P ++++ 
Sbjct: 139 ESRPAGTPVAVLDWDALAARVADCTLCRLCEKRTNTVFGVGDREADWMLIGEAPGENEDK 198

Query: 124 SGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQI 182
            G+PF G+ G +LD MLQS+ + R   ++I+ +    PPGNRN    E+  C P + RQ+
Sbjct: 199 QGEPFVGQAGKLLDNMLQSLALKRGDNVYIANVIKCRPPGNRNPEPDEVASCEPYLQRQV 258

Query: 183 ELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL 242
            L+ PK+++ +G          DA       G+          +P + T HP  L++   
Sbjct: 259 ALVKPKLIVALGRFAAQTLLKTDASIAS-LRGRVHAYE----GVPVIVTYHPAYLLRSLQ 313

Query: 243 IKKNTWHALITLKKALK 259
            K   W  L   +   K
Sbjct: 314 DKSKAWADLCLARDTFK 330


>gi|328950429|ref|YP_004367764.1| phage SPO1 DNA polymerase-related protein [Marinithermus
           hydrothermalis DSM 14884]
 gi|328450753|gb|AEB11654.1| phage SPO1 DNA polymerase-related protein [Marinithermus
           hydrothermalis DSM 14884]
          Length = 205

 Score =  185 bits (469), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 11/192 (5%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           +L EL +  ++   C L     + +         LMI+G  P   ++  G+PF GK G +
Sbjct: 2   TLEELAAKAQACTACRLAEGRHTVVFGEGDPDAQLMIVGEGPGADEDAQGRPFVGKAGQL 61

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP-IIMRQIELISPKILLFIG 194
           L+++L++  I R  ++I+ I    PPGNRN    E +IC    + +QIELI P+I+  +G
Sbjct: 62  LNRILEAAGIPRESVYIANIVKCRPPGNRNPLPDEAKICTGLWLSKQIELIRPQIIAPLG 121

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWH 249
           +    +F         +  G W         I      HP  L++ P       K  TW 
Sbjct: 122 SVAAQYFLGEK-ISITKVRGNWYEW----HGIKIFPMFHPAYLLRNPSRAPGSPKALTWR 176

Query: 250 ALITLKKALKNL 261
            +  LKK L  L
Sbjct: 177 DIQELKKTLDAL 188


>gi|226198966|ref|ZP_03794529.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei
           Pakistan 9]
 gi|225929066|gb|EEH25090.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei
           Pakistan 9]
          Length = 457

 Score =  185 bits (469), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
           +P+             A + +       EL++ +     C LC    +T+     E  D 
Sbjct: 244 EPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 303

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169
           M++G  P ++++  G+PF G+ G +LD ML+++ + R   ++I+ +    PPGNRN    
Sbjct: 304 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 363

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E+  C P + RQ+ L+ PK+++ +G          D        G+          +P +
Sbjct: 364 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 418

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            T HP  L++    K   W  L       ++
Sbjct: 419 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 449


>gi|308271358|emb|CBX27966.1| hypothetical protein N47_G32900 [uncultured Desulfobacterium sp.]
          Length = 228

 Score =  185 bits (469), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 43/185 (23%), Positives = 85/185 (45%), Gaps = 5/185 (2%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            +L  ++S L     C L     + +  T      L  +G  P   +++ G+PF G+ G 
Sbjct: 48  DNLDSIRSELGECKRCKLSGGRTNIVFGTGNPNARLAFVGEGPGYDEDVKGEPFVGRAGQ 107

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           +L K++++I + R +++I  I    PP NRN    E++ C P + RQ++ I+P  +  +G
Sbjct: 108 LLTKIIEAINLTRDEVYICNIIKCRPPSNRNPEPDEIKACFPFLKRQLDAIAPDFICALG 167

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
                   + + +   +  G+  +       +  + T HP  L++ P  K++ W  +  L
Sbjct: 168 TFAAQTLLDTN-EPISKLRGRLFDY----RGMQVMPTYHPAYLLRSPEKKRDVWEDMKKL 222

Query: 255 KKALK 259
              +K
Sbjct: 223 IGMMK 227


>gi|207743281|ref|YP_002259673.1| uracil-dna glycosylase-related protein [Ralstonia solanacearum
           IPO1609]
 gi|206594678|emb|CAQ61605.1| uracil-dna glycosylase-related protein [Ralstonia solanacearum
           IPO1609]
          Length = 277

 Score =  185 bits (469), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 52/241 (21%), Positives = 95/241 (39%), Gaps = 11/241 (4%)

Query: 26  WVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSP-----LVQQADSIAQKACSLHEL 80
            V DEP          + + + S  +P                 +   +    A    +L
Sbjct: 38  AVADEPAPFIIEPPVIEPRVVVSEAEPPPMAPPAAPVADIPVAPELPRAQRIAAFDWAQL 97

Query: 81  KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML 140
           ++ +     C LC     T+        D M+IG  P + ++  G+PF G+ G +LD ML
Sbjct: 98  EAAVSGCTACKLCERRTQTVFGVGDRQADWMLIGEAPGEQEDRQGEPFVGQAGKLLDSML 157

Query: 141 QSIEIMRTQ-IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199
           +++ + R   + I+ +    PPGNR+    E+ +C P + RQI L+ P++++ +G     
Sbjct: 158 RAVGLSRETGVFIANVLKCRPPGNRDPEPDEVAMCDPYLKRQIALVKPRVIIVLGRFPAQ 217

Query: 200 FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
                      +  G+   +      +P + T HP  L++    K   W  L   +K   
Sbjct: 218 SLLQ-TQTPVGKLRGRVHEV----DGVPVVVTYHPAYLLRTLTDKARAWEDLCLARKVYA 272

Query: 260 N 260
            
Sbjct: 273 E 273


>gi|167570399|ref|ZP_02363273.1| putative phage-related DNA polymerase [Burkholderia oklahomensis
           C6786]
          Length = 311

 Score =  185 bits (469), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 6/207 (2%)

Query: 55  NIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIG 114
                 +     A   +       EL++ +     C LC    +T+     E  D M+IG
Sbjct: 102 PALPDVAAKPAAASEPSVAELGWDELRARVADCRRCRLCEKRTNTVFGVGDERADWMLIG 161

Query: 115 YTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEI 173
             P ++++  G+PF G+ G +LD ML+++ + R   ++I+ +    PPGNRN    E+  
Sbjct: 162 EAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPDEVAR 221

Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
           C P + RQ+ L+ PK+++ +G          DA       G+          +P + T H
Sbjct: 222 CEPYLQRQVALVKPKLIVALGRFAAQTLLKTDASIAS-MRGRVHQYE----GVPVIVTYH 276

Query: 234 PQELIQYPLIKKNTWHALITLKKALKN 260
           P  L++    K   W  L     A +N
Sbjct: 277 PAYLLRSLQDKAKAWSDLCLANDAYRN 303


>gi|124265496|ref|YP_001019500.1| putative DNA polymerase-like protein [Methylibium petroleiphilum
           PM1]
 gi|124258271|gb|ABM93265.1| putative DNA polymerase-related protein, bacteriophage-type
           [Methylibium petroleiphilum PM1]
          Length = 260

 Score =  185 bits (469), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 55/252 (21%), Positives = 104/252 (41%), Gaps = 17/252 (6%)

Query: 19  YADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQ-KACSL 77
            A+ G+  V+  P   A+     K ++  S +   +    +    V +       +A   
Sbjct: 11  LAEMGIR-VWQAPAAAASPVIDAKVEAAVSPVAAASPAPVVPRVAVARGARPEDVEAMDW 69

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
             L++ +     C LC    +T+          M++G  P + ++  G+PF GK G +LD
Sbjct: 70  PTLRAAVAGCTACGLCRGRTNTVFGVGHTQAHWMVVGEAPGEQEDRLGEPFVGKAGQLLD 129

Query: 138 KMLQSIEIMR----------TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP 187
            MLQ++ + R           Q++I+ +    PP NRN    E+  C P + RQ+ L+ P
Sbjct: 130 HMLQALGLTRRAEGEGLQPAQQVYIANVLKCRPPMNRNPQPEEVAQCEPYLARQVALLQP 189

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247
           +++L +G            +   +  G+          +P + T HP  L++ P  K   
Sbjct: 190 RLILAMGRFAVQSLLQ-TGEPIGRLRGRIHQYQ----GVPAIVTYHPAYLLRNPADKAKA 244

Query: 248 WHALITLKKALK 259
           W  L   ++ ++
Sbjct: 245 WDDLCLAREVMR 256


>gi|78044945|ref|YP_359051.1| uracil-DNA glycosylase [Carboxydothermus hydrogenoformans Z-2901]
 gi|77997060|gb|ABB15959.1| uracil-DNA glycosylase, family 4 [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 198

 Score =  184 bits (468), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 5/187 (2%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
             L  LK    +   C+L + +   +     E   LM++G  P   ++  G+PF G  G 
Sbjct: 2   EELKALKEEALACQRCNLRAHAQRVVFGEGNEKALLMLVGEGPGAEEDRQGRPFVGAAGE 61

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           +L+K+L++  I R +++I  +    PP NR  +  E+  CR  + RQIELI PKI++ +G
Sbjct: 62  LLNKILEAAGISREEVYIGNVVKCRPPNNRVPTREEVAACRTFLDRQIELIKPKIIVCLG 121

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
                     D  +  +  G W         I  + T HP  L++ P  K+  W     +
Sbjct: 122 ATAAQTLIGPD-VRITKIRGLWHE----KGEIKIMPTFHPAALLRDPTKKRPAWEDFQKV 176

Query: 255 KKALKNL 261
           +     L
Sbjct: 177 RDLYFAL 183


>gi|310814870|ref|YP_003962834.1| phage SPO1 DNA polymerase-related protein [Ketogulonicigenium
           vulgare Y25]
 gi|308753605|gb|ADO41534.1| phage SPO1 DNA polymerase-related protein [Ketogulonicigenium
           vulgare Y25]
          Length = 263

 Score =  184 bits (468), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 60/258 (23%), Positives = 111/258 (43%), Gaps = 19/258 (7%)

Query: 14  TIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQ 72
            +  +  + G      D+P +      +  + +  + I      +      + + D+ A+
Sbjct: 12  EMLAWLVEMGADEAIADQPVDRYALPGESPKIAAPAPIAAPEKPKAARLGPLPEVDAPAE 71

Query: 73  KA------CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126
            A       +L +L S++  F  C L   + S + +       +MI+G  P   ++ +G+
Sbjct: 72  AAALAASAQNLEQLASVMEGFDLCALKQGARSFVFSDGDPAARVMIVGEAPGREEDRAGR 131

Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIH------ISMISPWHPPGNRNLSNIEMEICRPIIMR 180
           PF G+ G +LD+M  +I + R+         I+ + PW PP NR  S+ E+ +  P + R
Sbjct: 132 PFVGRAGQLLDRMFGAIGLSRSAPMADQAVYIANVLPWRPPENRTPSDTEIAMMLPFLQR 191

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
            IEL  P+ L+ +GN               +  G W+ +    +  P L   HP  L++ 
Sbjct: 192 HIELADPEYLVLMGNTPCKALLGQAG--ILRLRGNWAEV----TGRPALPMTHPAYLLRE 245

Query: 241 PLIKKNTWHALITLKKAL 258
           P  K+  W  L++LK  L
Sbjct: 246 PGAKREAWADLLSLKARL 263


>gi|53803655|ref|YP_114693.1| phage SPO1 DNA polymerase-like protein [Methylococcus capsulatus
           str. Bath]
 gi|53757416|gb|AAU91707.1| phage SPO1 DNA polymerase-related protein [Methylococcus capsulatus
           str. Bath]
          Length = 243

 Score =  184 bits (467), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 6/216 (2%)

Query: 45  SIDSAIQPITNIRHIHSPLVQQADSIAQK-ACSLHELKSLLRSFHDCHLCSTSLSTICAT 103
            + S   P         P              +   L + + +   C L  T   T+   
Sbjct: 25  KLRSQPVPAAEPAADAFPSPPGRRECEGPDEENWDRLAAEVAACTRCELHLTRTQTVFGV 84

Query: 104 QTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGN 163
                  M+IG  P + +++ G+PF G+ G +L++ML++I + R +++I+ I    PP N
Sbjct: 85  GNRRATWMVIGEAPGEQEDLQGEPFVGRAGQLLNEMLRAIGLKREEVYIANILKCRPPRN 144

Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH 223
           R+    E   C   + RQI LI P+I+L  G         +  +   +  G+        
Sbjct: 145 RDPKPEEAAACESYLKRQIALIRPRIILAAGRIAAQNLLKST-ETIGKLRGRVHRYEN-- 201

Query: 224 SIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
             IP + T HP  L++ PL K+  W  L+   + L 
Sbjct: 202 --IPLVITYHPAYLLRAPLEKRKAWQDLLLAVETLN 235


>gi|107028777|ref|YP_625872.1| phage SPO1 DNA polymerase-related protein [Burkholderia cenocepacia
           AU 1054]
 gi|116690064|ref|YP_835687.1| phage SPO1 DNA polymerase-related protein [Burkholderia cenocepacia
           HI2424]
 gi|105897941|gb|ABF80899.1| phage SPO1 DNA polymerase-related protein [Burkholderia cenocepacia
           AU 1054]
 gi|116648153|gb|ABK08794.1| phage SPO1 DNA polymerase-related protein [Burkholderia cenocepacia
           HI2424]
          Length = 346

 Score =  184 bits (467), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 52/240 (21%), Positives = 88/240 (36%), Gaps = 11/240 (4%)

Query: 26  WVFDEPNNEATYESQRKEKSIDSAI-----QPITNIRHIHSPLVQQADSIAQKACSLHEL 80
                P +  T   + +                            +             L
Sbjct: 99  ASITSPASTDTMPPKDEAPPAGDDDFAWFDAAPPGESVPVPAAESRPAGAPVAVLDWDAL 158

Query: 81  KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML 140
            + +     C LC    +T+        D M+IG  P ++++  G+PF G+ G +LD ML
Sbjct: 159 AARVADCTLCRLCEKRTNTVFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLLDNML 218

Query: 141 QSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199
           QS+ + R   ++I+ +    PPGNRN    E+  C P + RQ+ L+ PK+++ +G     
Sbjct: 219 QSLALKRGDNVYIANVIKCRPPGNRNPEPDEVASCEPYLQRQVALVKPKLIVALGRFAAQ 278

Query: 200 FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
                DA       G+          +P + T HP  L++    K   W  L   +   K
Sbjct: 279 TLLKTDASIAS-LRGRVHAYE----GVPVIVTYHPAYLLRSLQDKSKAWADLCLARDTFK 333


>gi|83313537|ref|YP_423801.1| Uracil-DNA glycosylase [Magnetospirillum magneticum AMB-1]
 gi|82948378|dbj|BAE53242.1| Uracil-DNA glycosylase [Magnetospirillum magneticum AMB-1]
          Length = 254

 Score =  184 bits (467), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 3/222 (1%)

Query: 42  KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTIC 101
           ++    +            S L   A  +A     L  L+  +  F    L   + ST+ 
Sbjct: 32  RQPRPHAEPMAAPPGALSASALPGTAAHLAAGCADLQALRHAMEGFEGLQLKQAASSTVF 91

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
                   +M IG  P   ++  G PF G +G +LD+ML SI + R+  +I+ + PW PP
Sbjct: 92  GDGNPESAVMCIGEAPGQEEDRRGLPFVGPSGKLLDRMLGSIGLDRSTCYITNVVPWRPP 151

Query: 162 GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221
            NR  +  E+ +C P + R IEL+ P++L+ +G  +        A    +  G+W    +
Sbjct: 152 ANRKPTPDEVAVCMPFLTRHIELVDPQVLILLGGASAAAV-LAKADGINRLRGRWFEFNS 210

Query: 222 PH--SIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
           P     IP LAT HP  L++ P  K++ W  L+ +++ +  +
Sbjct: 211 PGLPRPIPALATFHPAYLLRTPEAKRDAWRDLLMIRRRMDAV 252


>gi|114567385|ref|YP_754539.1| Uracil-DNA glycosylase-like protein [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|114338320|gb|ABI69168.1| Uracil-DNA glycosylase-like protein [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
          Length = 233

 Score =  184 bits (467), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 7/214 (3%)

Query: 50  IQPITNIRHIHSPLVQ--QADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEG 107
            +     + I SP +   + +        +  L+ L R+ ++C L S     + +     
Sbjct: 20  QEKQVAAKEIRSPFLPGIKVEEAFPGIKEVALLEELARNCNNCRLRSGCRQVVFSDGDVK 79

Query: 108 QDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLS 167
             +M IG  P   ++  G+PF GK G +LDK+L + EI R+Q++IS +    PPGNR  +
Sbjct: 80  SRIMFIGEGPGKDEDEQGRPFVGKAGQLLDKILVAAEIPRSQVYISNVVKCRPPGNRLPN 139

Query: 168 NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227
             E+  CR  +  QI ++ P I++ +G        +  A    +  GKW N       + 
Sbjct: 140 PDEVRECRNYLEAQIRIMQPAIIVCLGAMASQVVIDPKASV-SKIRGKWFN----RQGVK 194

Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
            +AT HP  L++ P  K+  W     ++     +
Sbjct: 195 IMATYHPAALLRNPSYKRPAWQDFQMIRDEYNKV 228


>gi|149194079|ref|ZP_01871177.1| Uracil-DNA glycosylase [Caminibacter mediatlanticus TB-2]
 gi|149136032|gb|EDM24510.1| Uracil-DNA glycosylase [Caminibacter mediatlanticus TB-2]
          Length = 214

 Score =  184 bits (467), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 49/186 (26%), Positives = 93/186 (50%), Gaps = 6/186 (3%)

Query: 74  ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
              L EL+++ ++   C L  T  + +         LM IG  P + ++ +G+PF G+ G
Sbjct: 34  PNELKELENICKNCTLCDLSKTRTNIVFGEGNPKAKLMFIGEGPGEMEDKTGRPFVGRAG 93

Query: 134 NMLDKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192
            +L K+++++ E+ R  ++I+ I    PP NR  +  E E C+P +++QI++I+PKIL+ 
Sbjct: 94  KLLTKIIENVLELSREDVYIANIVKCRPPNNRVPTIEEAESCKPYLIKQIDIINPKILVC 153

Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
           +G      +  N+     +  G+             + T HP  L++ P  KK  +   +
Sbjct: 154 LGKTAF-MYLMNNNIPISKIRGQIFEY----KGKKVIPTYHPSFLLRNPSAKKEAYKDFL 208

Query: 253 TLKKAL 258
            +K+ L
Sbjct: 209 LIKELL 214


>gi|193213467|ref|YP_001999420.1| phage SPO1 DNA polymerase-related protein [Chlorobaculum parvum
           NCIB 8327]
 gi|193086944|gb|ACF12220.1| phage SPO1 DNA polymerase-related protein [Chlorobaculum parvum
           NCIB 8327]
          Length = 207

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 5/201 (2%)

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120
            P+ +Q    A  A  L  L  +++    C L  T  S +         + +IG  P   
Sbjct: 8   DPVPEQPKQQAVPALDLGSLGKVVQECRKCRLAETRNSVVFGEGNPKARVFVIGEAPGAD 67

Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180
           ++  G+PF G++G +LDK+L +I   R+ ++I  I    PP NRN    E+E C+P +M+
Sbjct: 68  EDAQGRPFVGRSGQLLDKILLAIGFERSDVYIGNIIKCRPPQNRNPLGDEIECCKPWLMQ 127

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
           Q+E+I P I+L +G    N     +        GK        +      T HP  L++ 
Sbjct: 128 QLEIIKPNIILLLGRVAANTIL-ENTLSMSAMRGKL----IRWNGFDCFVTYHPAALLRN 182

Query: 241 PLIKKNTWHALITLKKALKNL 261
           P  K+  W  +  L+     +
Sbjct: 183 PNWKRLCWEDVQLLRAHYDKV 203


>gi|82703240|ref|YP_412806.1| phage SPO1 DNA polymerase-related protein [Nitrosospira multiformis
           ATCC 25196]
 gi|82411305|gb|ABB75414.1| phage SPO1 DNA polymerase-related protein [Nitrosospira multiformis
           ATCC 25196]
          Length = 271

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 61/244 (25%), Positives = 102/244 (41%), Gaps = 12/244 (4%)

Query: 25  YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKAC------SLH 78
               D   +     +Q     + +  +    +  +  P     + +A+K           
Sbjct: 29  ECTEDGNPSRTPESAQVMVAPVVAPSEFEEQVEQVCVPSANATEDVAEKRRAMILRMEWD 88

Query: 79  ELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDK 138
           +LK  +     C LCS+   T+        D + +G  P   ++  G+PF G+ G +LD 
Sbjct: 89  QLKESVEGCVACRLCSSRTRTVFGVGDPNADWLYVGEGPGAQEDALGEPFVGQAGKLLDN 148

Query: 139 MLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197
           ML +I + R   + I+ I    PPGNR  S+ E + C P + RQIELI P++++ +G   
Sbjct: 149 MLMAIGLKRGRDVFIANIVKCRPPGNREPSDDEAQCCEPYLARQIELIKPRLIVALGKTA 208

Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKA 257
                N DA       GK       H  IP + T HP  L++  + K   W  L   ++ 
Sbjct: 209 ARNLLNTDASIGS-LRGKLH----QHEGIPVIVTYHPAYLLRTLVAKAKAWEDLCFAQRT 263

Query: 258 LKNL 261
           ++ L
Sbjct: 264 MQAL 267


>gi|294085230|ref|YP_003551990.1| phage SPO1 DNA polymerase-like protein [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292664805|gb|ADE39906.1| phage SPO1 DNA polymerase-related protein [Candidatus
           Puniceispirillum marinum IMCC1322]
          Length = 317

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 68/308 (22%), Positives = 121/308 (39%), Gaps = 51/308 (16%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVF-------------------------------- 28
           M+++   + +Q++T   + A+ GV   F                                
Sbjct: 1   MSNQSAATIQQLITQLAWQAEMGVDEAFLGAEALAMPKVKLDKYLPSSIAAAPEAIATTP 60

Query: 29  ----------DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSP-LVQQADSIAQKACSL 77
                           AT       ++      P+        P     A      A  L
Sbjct: 61  DDSARHSASVMSAPKAATLSGAMPMQTPPMQTPPMQTPPMQTPPMQTPPAQISGPDAPDL 120

Query: 78  HEL------KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
             +      K+ L +F  C L  T+ + + A    G  LMIIG  P   +++ G PF G 
Sbjct: 121 AAIGSLAALKAGLLAFEGCALKHTASNLVFADGNPGARLMIIGEAPGRDEDMVGLPFVGV 180

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191
           +G +LDKML SI + R+ ++I+ + PW PPGNR  +  E  +  P + R ++L +P  +L
Sbjct: 181 SGQLLDKMLASIGLDRSHVYIANLLPWRPPGNRTPTTEETAMMLPWLRRHVQLANPDYIL 240

Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS-IIPTLATVHPQELIQYPLIKKNTWHA 250
            +G        +       +  G+W ++    +   PTLA++HP  L++ P  K+ ++  
Sbjct: 241 ILGGSAAKAVLDTK-DGILKLRGRWQDVDFGDAITRPTLASLHPAYLLRSPAQKRLSFAD 299

Query: 251 LITLKKAL 258
           ++ +   L
Sbjct: 300 MLAVNSRL 307


>gi|254179296|ref|ZP_04885895.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 1655]
 gi|184209836|gb|EDU06879.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 1655]
          Length = 463

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
           +P+             A + +       EL++ +     C LC    +T+     E  D 
Sbjct: 250 EPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADW 309

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNI 169
           M++G  P ++++  G+PF G+ G +LD ML+++ + R   ++I+ +    PPGNRN    
Sbjct: 310 MLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPD 369

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E+  C P + RQ+ L+ PK+++ +G          D        G+          +P +
Sbjct: 370 EVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIAS-MRGRVHQYE----GVPVI 424

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            T HP  L++    K   W  L       ++
Sbjct: 425 VTYHPAYLLRSLQDKAKAWSDLCLANDTYRS 455


>gi|170702440|ref|ZP_02893325.1| phage SPO1 DNA polymerase-related protein [Burkholderia ambifaria
           IOP40-10]
 gi|170132643|gb|EDT01086.1| phage SPO1 DNA polymerase-related protein [Burkholderia ambifaria
           IOP40-10]
          Length = 349

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 91/231 (39%), Gaps = 6/231 (2%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P   AT +        D A            P   +  +          L + +     C
Sbjct: 112 PAPSATADDMPPATEDDFAWFDAAPPGDPLPPDEPRPAATPVAMLDWETLAARVADCTSC 171

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQ 149
            LC    +T+        D M+IG  P ++++  G+PF G+ G +LD MLQS+ + R   
Sbjct: 172 RLCEKRTNTVFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLLDNMLQSLALKRGEN 231

Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209
           ++I+ +    PPGNRN    E+  C P + RQ+ L+ PK+++ +G          DA   
Sbjct: 232 VYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDASIA 291

Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
               G+          +P + T HP  L++    K   W  L   +   + 
Sbjct: 292 S-LRGRVHTYE----GVPVIVTYHPAYLLRSLQDKSKAWADLCLARDTFQQ 337


>gi|313672976|ref|YP_004051087.1| phage spo1 DNA polymerase-related protein [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312939732|gb|ADR18924.1| phage SPO1 DNA polymerase-related protein [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 226

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 48/204 (23%), Positives = 92/204 (45%), Gaps = 5/204 (2%)

Query: 57  RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYT 116
                P        + K   + ++   + S   C L  T L+ +        ++M IG  
Sbjct: 28  TDKSIPSPSLNLQNSSKFEQMQKIIEEVSSCFKCILGKTRLNVVPGEGNLDAEIMFIGEG 87

Query: 117 PSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP 176
           P + ++  G+PF G+ G +L KM++++   R +++I+ I    PP NR   + E   C  
Sbjct: 88  PGEDEDRQGRPFVGRAGQLLTKMIEAMGYKREEVYIANIVKCRPPNNRAPFDEEAFACIG 147

Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236
            + +QIE+++PK+++ +G+    +  N D + +    G++         I  + T HP  
Sbjct: 148 YVKKQIEIVNPKVIVTLGSTATRYLLNTDKKIST-IRGEFQEYN----GIKVMPTFHPSY 202

Query: 237 LIQYPLIKKNTWHALITLKKALKN 260
           L++   +KK  W  L  +   LK 
Sbjct: 203 LLRNQSMKKPAWEDLKKVIAFLKK 226


>gi|134296052|ref|YP_001119787.1| phage SPO1 DNA polymerase--like protein [Burkholderia vietnamiensis
           G4]
 gi|134139209|gb|ABO54952.1| phage SPO1 DNA polymerase-related protein [Burkholderia
           vietnamiensis G4]
          Length = 342

 Score =  184 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 57/227 (25%), Positives = 91/227 (40%), Gaps = 6/227 (2%)

Query: 35  ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94
           A+          D A    T       P   +AD           L + +     C LC 
Sbjct: 109 ASASDMPLAAEDDFAWFDATPPGDPLPPAEMRADVAPVATLDWDALAARVAGCTSCRLCE 168

Query: 95  TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHIS 153
               T+        D M+IG  P ++++  G+PF G+ G +LD MLQS+ + R T ++I+
Sbjct: 169 KRTQTVFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLLDNMLQSLTLARGTNVYIA 228

Query: 154 MISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL 213
            +    PPGNRN    E+  C P + RQ+ L+ PK+++ +G          DA       
Sbjct: 229 NVIKCRPPGNRNPEPDEVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDASIAS-LR 287

Query: 214 GKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
           G+          +P + T HP  L++    K   W  L   +   + 
Sbjct: 288 GRVHAYE----GVPVIVTYHPAYLLRSLQDKSKAWADLCLARDTFRQ 330


>gi|332980856|ref|YP_004462297.1| phage SPO1 DNA polymerase-like protein [Mahella australiensis 50-1
           BON]
 gi|332698534|gb|AEE95475.1| phage SPO1 DNA polymerase-related protein [Mahella australiensis
           50-1 BON]
          Length = 189

 Score =  184 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 5/182 (2%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L  L   + +   C L  +   T+         LM +G  P   +++ G+PF G+ G +L
Sbjct: 6   LKPLMEEVANCTKCPLAQSRTHTVFGEGNLNARLMFVGEGPGKDEDLQGRPFVGRAGQLL 65

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           D ML++I I R++++I+ +    PP NR  +  E + C P +  Q+ +I PKI++ +G  
Sbjct: 66  DNMLEAIGIKRSEVYIANVVKCRPPQNRVPTPSEAKACLPYLRNQVAIIKPKIIVCLGAT 125

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                 + D  K  Q  G+W            +AT HP  +++ P  KK  W   I +K+
Sbjct: 126 AAKNLIDPD-FKITQQRGQWIE----RKGYYFIATFHPAAILRDPSKKKPAWEDFILIKE 180

Query: 257 AL 258
             
Sbjct: 181 KY 182


>gi|315186692|gb|EFU20451.1| phage SPO1 DNA polymerase-related protein [Spirochaeta thermophila
           DSM 6578]
          Length = 253

 Score =  184 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 56/259 (21%), Positives = 107/259 (41%), Gaps = 18/259 (6%)

Query: 2   TSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHS 61
            S++ L  +++     F  +  V+  ++ P+         +  ++     P+       S
Sbjct: 1   MSEQDL-YKELWE-LSFLVEDLVHGGWERPH--------PEPPTVPGEAPPLVAGSGERS 50

Query: 62  PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121
                       A +L  L   +R+ + C L  T    +  T   G  +M++G  P   +
Sbjct: 51  EGKPTGGD--DPARTLGALHEQVRACNRCDLARTRRQAVPGTGRVGLPVMVVGEAPGADE 108

Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180
           ++ G+PF G+ G  LDK L +I + R   + I+ +    PPGNR+    E+  C P +  
Sbjct: 109 DVKGEPFVGRAGQYLDKWLAAIGLQRGRDVFITNVVKCRPPGNRDPRPDEISACLPFLEA 168

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
           QI L+ P+ +L +G    +       +   +  G+          IP + T HP  +++ 
Sbjct: 169 QIALVRPRAILTVGRFAASTLLG-TQEGISRLRGRVYRY----RDIPLVPTYHPSAVLRD 223

Query: 241 PLIKKNTWHALITLKKALK 259
           P +++  W  L  L   L+
Sbjct: 224 PSLRRPVWEDLKLLSSVLR 242


>gi|187924459|ref|YP_001896101.1| phage SPO1 DNA polymerase-related protein [Burkholderia
           phytofirmans PsJN]
 gi|187715653|gb|ACD16877.1| phage SPO1 DNA polymerase-related protein [Burkholderia
           phytofirmans PsJN]
          Length = 414

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 52/239 (21%), Positives = 91/239 (38%), Gaps = 16/239 (6%)

Query: 29  DEPNNEATYESQRKEKSIDSAIQPIT----------NIRHIHSPLVQQADSIAQKACSLH 78
           +EP    +   Q+                         +      ++     A       
Sbjct: 167 NEPQTPQSSRPQQPRSPEPPTFDAPPSDDFAWFDDLPTQAPADARLEAPAPPAIHTLDWD 226

Query: 79  ELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDK 138
            L   + +   C LC    +T+      G D M+IG  P ++++  G+PF G+ G +LD 
Sbjct: 227 ALSERVAACQLCRLCEKRTNTVFGVGDRGADWMLIGEAPGENEDRLGEPFVGQAGKLLDN 286

Query: 139 MLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197
           ML+S+ + R    +I+ +    PPGNRN    E+  C P + RQ+ L+ PK+++ +G   
Sbjct: 287 MLRSLTLARDTNVYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVALVKPKLIVALGRFA 346

Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                  +A       G+          +P + T HP  L++    K   W  L   + 
Sbjct: 347 AQSLLKTEA-SISSLRGRVHEYE----GVPVIVTYHPAYLLRSLPDKAKAWADLCLARD 400


>gi|258517054|ref|YP_003193276.1| phage SPO1 DNA polymerase-related protein [Desulfotomaculum
           acetoxidans DSM 771]
 gi|257780759|gb|ACV64653.1| phage SPO1 DNA polymerase-related protein [Desulfotomaculum
           acetoxidans DSM 771]
          Length = 191

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 49/191 (25%), Positives = 77/191 (40%), Gaps = 6/191 (3%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
           +K    ++LK        C L     + +      G  +M IG  P   ++  G+PF G+
Sbjct: 3   EKIKLWNDLKEKCLQCTGCALSEKRTNVVFGEGYIGAGIMFIGEGPGQQEDEQGRPFVGR 62

Query: 132 TGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
            G +LDKML +I + R     I  +    PPGNR     E   C P +  Q+ +I P+I+
Sbjct: 63  AGVLLDKMLDAIGLSRHTNAMICNVVKCRPPGNRVPDRQEAAACLPFLRAQVAIIKPRII 122

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
           + +G        +       Q  G+W            +AT HP  L++ P  K   W  
Sbjct: 123 VCLGATAVKHVLD-TVSGITQIRGQWYE----KKGYWMIATFHPAALLRDPAKKVLVWED 177

Query: 251 LITLKKALKNL 261
           L  ++     L
Sbjct: 178 LKAIRAKYDEL 188


>gi|299139044|ref|ZP_07032221.1| phage SPO1 DNA polymerase-related protein [Acidobacterium sp.
           MP5ACTX8]
 gi|298599198|gb|EFI55359.1| phage SPO1 DNA polymerase-related protein [Acidobacterium sp.
           MP5ACTX8]
          Length = 332

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 49/224 (21%), Positives = 94/224 (41%), Gaps = 6/224 (2%)

Query: 36  TYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHL-CS 94
           +  S        +   P        +PL  Q    A++  +L  +++ +     C L  +
Sbjct: 106 SEPSPLNLPPELAVPMPKPVSFDQLAPLPTQILPAAERPAALEAIRADIGDCTRCPLAYA 165

Query: 95  TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154
              + + A       LM +G  P   ++ SG PF GK G +L+ M++++ + R +++I+ 
Sbjct: 166 GRHTIVFADGDPNAKLMFVGEGPGADEDASGLPFVGKAGQLLNNMIKAMGLQREEVYIAN 225

Query: 155 ISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLG 214
           I    PPGNR    IE   C   ++RQI+++ P++++ +G     +             G
Sbjct: 226 IVKCRPPGNRTPEPIEANTCSQFLLRQIDIVRPQVIVALGGTAATYLLGVKQSL-SSLRG 284

Query: 215 KWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
           +W +          + T HP  L++ P  K   W  L  +   +
Sbjct: 285 RWHST----RGSKLVVTYHPAFLLRDPRQKGEAWKDLQMVMAEM 324


>gi|304315599|ref|YP_003850744.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777101|gb|ADL67660.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 185

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 5/185 (2%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L +L     +   C L +   + +         +M IG  P   ++I G+PF GK G +L
Sbjct: 6   LKQLMEECMNCTKCPLHNVRNNVVFGEGNLRSKIMFIGEGPGRDEDIQGRPFVGKAGQLL 65

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           +KM+++I++ R  ++I+ I    PP NR     E++ C P +  Q+ +I+PKI++ +G  
Sbjct: 66  NKMIEAIDLKREDVYIANIVKCRPPNNRVPLQNEVDACLPYLRNQVAIIAPKIIVCLGAT 125

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                 +    K     GKW         +  +AT HP  L++ P  K   W    ++K 
Sbjct: 126 AAKAIID-KNFKITVMRGKWIE----RKGVKIIATYHPAALLRDPEKKYPAWEDFKSIKN 180

Query: 257 ALKNL 261
            L+ +
Sbjct: 181 ELEKV 185


>gi|170733398|ref|YP_001765345.1| phage SPO1 DNA polymerase-related protein [Burkholderia cenocepacia
           MC0-3]
 gi|169816640|gb|ACA91223.1| phage SPO1 DNA polymerase-related protein [Burkholderia cenocepacia
           MC0-3]
          Length = 342

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 52/236 (22%), Positives = 86/236 (36%), Gaps = 12/236 (5%)

Query: 31  PNNEATYESQRKEKSIDSAI------QPITNIRHIHSPLVQQADSIAQKACSLHELKSLL 84
           P         + E                            +             L + +
Sbjct: 99  PPASTDTMPPKDEAPPAGDDDFAWFDAAPPGESVPVPAAESRPAGTPVAVLDWDALAARV 158

Query: 85  RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIE 144
                C LC    +T+        D M+IG  P ++++  G+PF G+ G +LD MLQS+ 
Sbjct: 159 ADCTLCRLCEKRTNTVFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLLDNMLQSLA 218

Query: 145 IMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
           + R   ++I+ +    PPGNRN    E+  C P + RQ+ L+ PK+++ +G         
Sbjct: 219 LKRGDNVYIANVIKCRPPGNRNPEPDEVASCEPYLQRQVALVKPKLIVALGRFAAQTLLK 278

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
            DA       G+          +P + T HP  L++    K   W  L   +   K
Sbjct: 279 TDASIAS-LRGRVHAYE----GVPVIVTYHPAYLLRSLQDKSKAWADLCLARDTFK 329


>gi|187477567|ref|YP_785591.1| uracil-DNA glycosylase [Bordetella avium 197N]
 gi|115422153|emb|CAJ48677.1| uracil-DNA glycosylase [Bordetella avium 197N]
          Length = 206

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 5/204 (2%)

Query: 55  NIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIG 114
            +          A  +A     L  L+  + +   C LC      +     +    M++G
Sbjct: 4   ELAAPLGAGADTARRVADF--DLARLQQEVLACTACGLCQGRKHAVFGDGAQAARWMVVG 61

Query: 115 YTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEI 173
             P + ++  G PF G++G +LD ML S+ + R Q   I+ +    PPGNRN    E+  
Sbjct: 62  EAPGEQEDRRGLPFVGRSGQLLDAMLASVGMSREQDVFIANVIKCRPPGNRNPKPEEIAA 121

Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP-HSIIPTLATV 232
           C P +MRQI L+ P+ +L +G          DA       G+   L T     IP + + 
Sbjct: 122 CSPYLMRQIALLRPERILVLGRFAAQTLLGTDA-AISSLRGRQHVLKTEAGREIPVVVSY 180

Query: 233 HPQELIQYPLIKKNTWHALITLKK 256
           HP  L++ P  K   W  L   ++
Sbjct: 181 HPAYLLRSPAEKARAWQDLQLARQ 204


>gi|291614685|ref|YP_003524842.1| phage SPO1 DNA polymerase-related protein [Sideroxydans
           lithotrophicus ES-1]
 gi|291584797|gb|ADE12455.1| phage SPO1 DNA polymerase-related protein [Sideroxydans
           lithotrophicus ES-1]
          Length = 245

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 51/230 (22%), Positives = 92/230 (40%), Gaps = 8/230 (3%)

Query: 32  NNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLH--ELKSLLRSFHD 89
                           +  +       +    + +  +    A +L+  +LK ++R    
Sbjct: 19  VRRGVPAEADVASLPAAHAETSQPALPVAEQPMLRQQTEPPPASTLNWTDLKRVVRDCSA 78

Query: 90  CHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-T 148
           C L S    T+     E  + + +G  P   ++  G+PF G+ G +LD ML ++ + R  
Sbjct: 79  CKLRSGCTQTVFGVGDEKAEWLFVGEGPGADEDAQGEPFVGQAGKLLDNMLAALRLKRGD 138

Query: 149 QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQK 208
           +++I+ I    PP NR     E+  C P + +QIELI PK+++ +G          DA  
Sbjct: 139 KVYIANIVKCRPPNNRTPEPDEIATCMPYLQQQIELIKPKLIVALGKTAATSLLGRDATL 198

Query: 209 TYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
                G   +        P + T HP  L++ P  K   W  L   ++ +
Sbjct: 199 GS-LRGTVHDY----HGTPLIVTYHPAYLLRSPAEKAKAWQDLCFARQRM 243


>gi|194333183|ref|YP_002015043.1| phage SPO1 DNA polymerase-like protein [Prosthecochloris aestuarii
           DSM 271]
 gi|194311001|gb|ACF45396.1| phage SPO1 DNA polymerase-related protein [Prosthecochloris
           aestuarii DSM 271]
          Length = 209

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 54/186 (29%), Positives = 83/186 (44%), Gaps = 5/186 (2%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           SL EL +  ++   C L  T  + +         +++IG  P   ++  G+PF G++G +
Sbjct: 23  SLDELGAQSKNCTQCQLAETRQNVVFGEGNPQAKIVVIGEGPGAEEDAQGRPFVGRSGKL 82

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           LDK+LQSI   R  ++I  I    PP NRN    E+E C P +  Q+ELI P I+L +G 
Sbjct: 83  LDKILQSIGFDRNDVYICNIVKCRPPANRNPLAEEIEQCLPWLNAQLELIQPGIILLLGK 142

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
              N    N         G              + T HP  L++ P  K   W  +  L+
Sbjct: 143 VAANTILQNKCSM-----GSMRGSIIRWGTYDVVVTYHPAALLRNPNWKYQCWEDVKMLR 197

Query: 256 KALKNL 261
           K   ++
Sbjct: 198 KHFDSM 203


>gi|188585122|ref|YP_001916667.1| phage SPO1 DNA polymerase-related protein [Natranaerobius
           thermophilus JW/NM-WN-LF]
 gi|179349809|gb|ACB84079.1| phage SPO1 DNA polymerase-related protein [Natranaerobius
           thermophilus JW/NM-WN-LF]
          Length = 195

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 58/186 (31%), Positives = 82/186 (44%), Gaps = 5/186 (2%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
            L  LK       +CHL  T    +     E  D+M+IG  P   ++   +PF G  G +
Sbjct: 9   DLESLKKEALICKNCHLRETCNGVVFGEGDEQADIMLIGEGPGAKEDELQRPFVGPAGEL 68

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           L KML +I   R  ++I+ I    PP NR  +  EM+ C PI+ +QI LI  KI++ +G 
Sbjct: 69  LTKMLAAINFSRDDVYITNIVKCRPPNNRTPNQEEMDTCLPILRQQIRLIQSKIIVILGG 128

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
                  +    K  +  G W         I  L T HP  L++ P  KK +W  L  LK
Sbjct: 129 AALKGLID-KNMKITKARGSWLE----RKGIHILPTYHPAYLLRNPAKKKESWEDLQNLK 183

Query: 256 KALKNL 261
                L
Sbjct: 184 AKYMEL 189


>gi|21673047|ref|NP_661112.1| DNA polymerase [Chlorobium tepidum TLS]
 gi|21646115|gb|AAM71454.1| DNA polymerase, bacteriophage-type [Chlorobium tepidum TLS]
          Length = 208

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 5/201 (2%)

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120
            P  ++A         L EL  +      C L  T  + +         L +IG  P   
Sbjct: 9   DPAPEEAAQPNSPLEGLGELCRITVECRKCRLAQTRKNVVFGEGNPQAGLFVIGEAPGAD 68

Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180
           ++  G+PF G++G +LDK+L +I   R  ++I  I    PP NRN    E++ C+P +M+
Sbjct: 69  EDAQGRPFVGRSGQLLDKILLAIGFERQDVYIGNIIKCRPPENRNPLADEIDCCKPWLMQ 128

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
           Q+ +I PK+LL +G    N     + Q      G+             + T HP  L++ 
Sbjct: 129 QLGIIKPKVLLLLGKVAANTIL-ENTQSMGLMRGRI----IKWKGFDCVVTYHPAALLRN 183

Query: 241 PLIKKNTWHALITLKKALKNL 261
           P  K+  W  +  L+     +
Sbjct: 184 PNWKRLCWEDVQMLRAHYDKV 204


>gi|116747914|ref|YP_844601.1| phage SPO1 DNA polymerase-like protein [Syntrophobacter
           fumaroxidans MPOB]
 gi|116696978|gb|ABK16166.1| phage SPO1 DNA polymerase-related protein [Syntrophobacter
           fumaroxidans MPOB]
          Length = 264

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 48/214 (22%), Positives = 85/214 (39%), Gaps = 5/214 (2%)

Query: 46  IDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQT 105
           I+      ++         +  +     A  L  +   L     C L S     +    +
Sbjct: 30  IEDWAAAWSDPAVGLPEPEKAIEQEPDPAGGLTVIAGELEGCRRCRLHSERTRIVFGEGS 89

Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRN 165
               L+ +G  P   ++  G+PF G+ G +LD+M++++   R  ++I  +    PP NR 
Sbjct: 90  AHAPLVFVGEGPGLEEDRQGRPFVGRAGRLLDQMIKALGFHREAVYICNVVKCRPPKNRT 149

Query: 166 LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI 225
             + E+  C P ++RQIE I P+++  +G                +  G           
Sbjct: 150 PESEEIARCGPFLIRQIEAIRPRVICALGACAAQTLVG-TGSSISRLRGSVHYW----RG 204

Query: 226 IPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
           IP + T HP  L++ P  K   W  LI ++  LK
Sbjct: 205 IPLICTFHPAYLLRTPAQKAAAWEDLILVRDLLK 238


>gi|331000978|ref|ZP_08324615.1| uracil-DNA glycosylase, family 4 [Parasutterella excrementihominis
           YIT 11859]
 gi|329569937|gb|EGG51694.1| uracil-DNA glycosylase, family 4 [Parasutterella excrementihominis
           YIT 11859]
          Length = 324

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 2/227 (0%)

Query: 33  NEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHL 92
           N     S R E +   A +  +  R +      +A            LK L++    C +
Sbjct: 98  NAPPPRSARPEPAAKPAYRSASEARGVRPEAYTEARIHQIATADWQTLKQLVQDCRACEI 157

Query: 93  CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-H 151
            S+ L  +         LM+IG  P   ++  G+PF G +G +LDK+L++ ++ R +   
Sbjct: 158 SSSRLHPVFGQGYPPCRLMLIGEAPGAEEDRLGQPFVGPSGKLLDKILEAAKLDREKDLC 217

Query: 152 ISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQ 211
           I       PP N      E   CRP + RQIELI P++++ +G    ++FF  D +    
Sbjct: 218 IFNTLKCRPPLNATPEKAETMACRPFLERQIELIDPEVIVAMGKPAASWFF-PDLKTLNP 276

Query: 212 NLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
             GK  NL         + T HP  L++ P  K+  W     +   L
Sbjct: 277 YRGKVHNLTVQGKPRKVIVTYHPSYLLRSPQEKRKAWLDWCLILDTL 323


>gi|217970656|ref|YP_002355890.1| phage SPO1 DNA polymerase-related protein [Thauera sp. MZ1T]
 gi|217507983|gb|ACK54994.1| phage SPO1 DNA polymerase-related protein [Thauera sp. MZ1T]
          Length = 304

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 47/222 (21%), Positives = 81/222 (36%), Gaps = 6/222 (2%)

Query: 40  QRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLST 99
             +      A                 A            L++ +R    C LC      
Sbjct: 86  PHRAARPQPAAASTPAAVRSAPAAPDPARGARISTLEWDALEAEIRDCKACGLCERRKQA 145

Query: 100 ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPW 158
           +          M++G  P   ++  G+PF G+ G +LD ML +I + R   ++I+     
Sbjct: 146 VPGVGDRQARWMLVGEAPGAEEDQRGEPFVGQAGRLLDNMLAAIGLKRGEDVYIANAVKC 205

Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218
            PP NR     E+  C+P + RQI L+ P++L+ +G        + +        GK   
Sbjct: 206 RPPHNRTPERGEIAACQPYLDRQIALVQPQLLVALGRPAAQALLDRE-IAISAARGKRFE 264

Query: 219 LCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
                +  P + T HP  L++ P  K   W  L   ++ +  
Sbjct: 265 ----RAGTPVVVTYHPAYLLRNPQDKAKAWEDLCFARRLIAE 302


>gi|163856012|ref|YP_001630310.1| bacteriophage-related DNA polymerase [Bordetella petrii DSM 12804]
 gi|163259740|emb|CAP42041.1| bacteriophage-related DNA polymerase [Bordetella petrii]
          Length = 298

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 56/226 (24%), Positives = 88/226 (38%), Gaps = 4/226 (1%)

Query: 30  EPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHD 89
            P  E              A +P   +          A  + + A     L+  +     
Sbjct: 70  APVREQKPAPAGAPTPPRPAARPNVPVPAAREQAQPAAQPV-EPARDFDALREQVIQCAA 128

Query: 90  CHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQ 149
           C LC+     +          M++G  P + ++  G PF G++G +LD ML S+ + R +
Sbjct: 129 CGLCNGRRHAVFGMGGRPARWMVVGEAPGEQEDRQGLPFVGRSGQLLDAMLASVGLSREK 188

Query: 150 I-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQK 208
              I+ +    PPGNRN    E+  C P +MRQIEL+ P+ +L +G          DA  
Sbjct: 189 DVFIANVIKCRPPGNRNPKPEEIAACSPYLMRQIELLKPERILVLGRFAAQTLLGTDATI 248

Query: 209 TYQNLGKWSNLCTP-HSIIPTLATVHPQELIQYPLIKKNTWHALIT 253
                G+   L       IP + + HP  L++ P  K   W  L  
Sbjct: 249 GS-LRGRRHELAAEDGRKIPVVVSYHPAYLLRSPAEKARAWQDLRL 293


>gi|257457232|ref|ZP_05622407.1| DNA polymerase domain protein [Treponema vincentii ATCC 35580]
 gi|257445383|gb|EEV20451.1| DNA polymerase domain protein [Treponema vincentii ATCC 35580]
          Length = 299

 Score =  183 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 13/209 (6%)

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTE-------GQDLMII 113
           +     ADS      S+ E+ + +     C L  T    +     E         ++M+I
Sbjct: 92  ADEDSPADSSGASFRSMQEIYAAVAQCSACVLGQTRTHPVAGEGPEELSRLTNSVEVMVI 151

Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRT-QIHISMISPWHPPGNRNLSNIEME 172
           G  P   ++  G+PF G+ G +LDKML++I++ R    +I+ +    PP NR+ +  E  
Sbjct: 152 GEGPGADEDRQGRPFVGRAGQLLDKMLEAIQLSRKTNCYITNVVKCRPPQNRDPAPEERN 211

Query: 173 ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATV 232
            C   +  QI LI PK++L +G           +    +  G++ +       IP + T 
Sbjct: 212 CCAAFLDAQIRLIRPKMILVMGRIAAQHLLQ-TSDGIGKLRGRFFDYQ----GIPLMPTY 266

Query: 233 HPQELIQYPLIKKNTWHALITLKKALKNL 261
           HP  L++   +K+  W  L   +  L  L
Sbjct: 267 HPSALLRDESLKRPAWEDLKRFRARLHEL 295


>gi|307719508|ref|YP_003875040.1| hypothetical protein STHERM_c18320 [Spirochaeta thermophila DSM
           6192]
 gi|306533233|gb|ADN02767.1| hypothetical protein STHERM_c18320 [Spirochaeta thermophila DSM
           6192]
          Length = 253

 Score =  183 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 53/259 (20%), Positives = 102/259 (39%), Gaps = 18/259 (6%)

Query: 2   TSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHS 61
            S++ L  +++     F  +  V+  ++ P                        +     
Sbjct: 1   MSEQDL-YKELWE-LSFLVEDLVHGGWERP----------HPAPPTVPAGAPPLVAGSGE 48

Query: 62  PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121
              ++       A +L  L   +R+ + C L  T    +      G  +M++G  P   +
Sbjct: 49  RSERKPTGGDDPARTLGALHEQVRACNRCDLARTRRHAVPGIGRVGLPVMVVGEAPGADE 108

Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180
           ++ G+PF G+ G  LDK L +I + R   + I+ +    PPGNR+    E+  C P +  
Sbjct: 109 DVKGEPFVGRAGQYLDKWLAAIGLQRGRDVFITNVVKCRPPGNRDPRPDEISACLPFLEA 168

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
           QI L+ P+ +L +G    +       +   +  G+          IP + T HP  +++ 
Sbjct: 169 QIALVRPRAILTVGRFAASTLLG-TQEGISRLRGRVYRY----RDIPLVPTYHPSAVLRD 223

Query: 241 PLIKKNTWHALITLKKALK 259
           P +++  W  L  L   L+
Sbjct: 224 PSLRRPVWEDLKLLSSVLR 242


>gi|320449933|ref|YP_004202029.1| uracil-DNA glycosylase, family 4 [Thermus scotoductus SA-01]
 gi|320150102|gb|ADW21480.1| uracil-DNA glycosylase, family 4 [Thermus scotoductus SA-01]
          Length = 205

 Score =  183 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 11/192 (5%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           +L  L++  ++   C L       +         LMI+G  P + ++ +G+PF GK G +
Sbjct: 2   TLELLQAQAKACTACRLAEGRTQVVFGEGNPDAQLMIVGEGPGEEEDKTGRPFVGKAGQL 61

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC-RPIIMRQIELISPKILLFIG 194
           L+++L++  I R  ++I+ I    PPGNR     E ++C    +++QIELI+P+I++ +G
Sbjct: 62  LNRILEAAGIPRESVYITNIVKCRPPGNRAPLPDEAKVCTDKWLLKQIELIAPQIIVPLG 121

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWH 249
                FF         +  G+W         I      HP  L++ P       K  TW 
Sbjct: 122 AVAAEFFLGEK-VSITKVRGQWFEW----HGIRVFPMFHPAYLLRNPSRTPGSPKHLTWL 176

Query: 250 ALITLKKALKNL 261
            +  +K+AL  L
Sbjct: 177 DIQEVKRALDAL 188


>gi|167837067|ref|ZP_02463950.1| putative phage-related DNA polymerase [Burkholderia thailandensis
           MSMB43]
          Length = 208

 Score =  183 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 6/185 (3%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
              L++ +     C LC    +T+     E  D M++G  P ++++  G+PF G+ G +L
Sbjct: 21  WDALRARVADCERCRLCEKRTNTVFGVGDESADWMLVGEAPGENEDKQGEPFVGQAGKLL 80

Query: 137 DKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           D ML+++ + R   ++I+ +    PPGNRN    E+  C P + RQ+ L+ PK+++ +G 
Sbjct: 81  DNMLRALALKRGENVYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVALVKPKLIVALGR 140

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
                    DA       G+          +P + T HP  L++    K   W  L    
Sbjct: 141 FAAQTLLKTDASIAS-MRGRVHRYE----GVPVIVTYHPAYLLRSLQDKAKAWSDLCLAN 195

Query: 256 KALKN 260
              +N
Sbjct: 196 DTYRN 200


>gi|311104684|ref|YP_003977537.1| uracil DNA glycosylase superfamily protein [Achromobacter
           xylosoxidans A8]
 gi|310759373|gb|ADP14822.1| uracil DNA glycosylase superfamily protein [Achromobacter
           xylosoxidans A8]
          Length = 333

 Score =  182 bits (462), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 3/213 (1%)

Query: 48  SAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEG 107
              +P+       +P      + A +  +L E+   + +   C LC    + +     + 
Sbjct: 121 PPPRPVPKAAEEAAPPPPVPVAEAIRNATLEEMHEQVVACAACGLCKGRRNAVFGHGGQP 180

Query: 108 QDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNL 166
              +++G  P + ++  G+PF G++G +LD ML S+ + R +   I+ +    PPGNRN 
Sbjct: 181 TRWLVVGEAPGEQEDRQGQPFVGRSGQLLDAMLSSVSMSRERDVFITNVIKCRPPGNRNP 240

Query: 167 SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT-PHSI 225
              E+  C P +MRQI L+ P+ +L +G          DA       G+   L T     
Sbjct: 241 KPEEIAACSPYLMRQIALLKPERILVLGRFAAQTLLGTDATIGS-LRGRIHQLKTDEGVE 299

Query: 226 IPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
           IP + + HP  L++ P  K   W  L      L
Sbjct: 300 IPVVVSYHPAYLLRSPSEKARAWQDLRLTVARL 332


>gi|332968166|gb|EGK07248.1| uracil-DNA glycosylase [Desmospora sp. 8437]
          Length = 241

 Score =  182 bits (462), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 46/186 (24%), Positives = 79/186 (42%), Gaps = 5/186 (2%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
            L  +         C L       +         LM +G  P   ++  G+PF G+ G +
Sbjct: 56  DLESVHQRYARCSRCPLHRGRTRIVLGEGNPASPLMFVGEGPGADEDRQGRPFVGRAGQL 115

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           L +ML++ EI R +I I+ I    PPGNR   + EM  C  I+  Q   I PK+++ +G+
Sbjct: 116 LSRMLEAAEIPRAEIFITNIVKCRPPGNRTPQDEEMATCITILREQFVAIRPKLIVTLGS 175

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
                  +  A +  +  G+W         +  + T HP  L++ P  K+  W     ++
Sbjct: 176 APTRALIDP-AARITRVRGQWVE----RKGVRMMPTFHPAYLLRNPEAKREAWIDFQAIR 230

Query: 256 KALKNL 261
            A + +
Sbjct: 231 DAYREV 236


>gi|315121906|ref|YP_004062395.1| putative uracil-DNA glycosylase [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495308|gb|ADR51907.1| putative uracil-DNA glycosylase [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 260

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 179/260 (68%), Positives = 205/260 (78%), Gaps = 2/260 (0%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60
           MT KR LSQE+IL  ALFYADSGVYWVFD  N +       ++  + S  QPI  I   +
Sbjct: 1   MTYKRTLSQEKILNTALFYADSGVYWVFDHSNGKTHKSWGEEKPPLSS--QPIKEIDQTN 58

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120
           +PLV++A SIAQ A SLHELKSL+ SFHDC L +TS STICATQ  G+DLMIIGYTPSDS
Sbjct: 59  NPLVEKAYSIAQNARSLHELKSLISSFHDCALQNTSSSTICATQEGGKDLMIIGYTPSDS 118

Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180
           DNI+G PFSGKTG++LDKMLQSI +MR Q H SMISPWHPPGNR LS IEMEICRP+IM+
Sbjct: 119 DNINGNPFSGKTGDILDKMLQSIGVMRIQTHTSMISPWHPPGNRQLSKIEMEICRPLIMK 178

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
           QIEL+SP+IL F+GNKT NFFFNND +  YQNLGKW  +   +  IPTL+TVHPQEL+QY
Sbjct: 179 QIELVSPRILFFLGNKTINFFFNNDDKANYQNLGKWHKIQVQNRTIPTLSTVHPQELMQY 238

Query: 241 PLIKKNTWHALITLKKALKN 260
           PLIKK  WH LITLKKALKN
Sbjct: 239 PLIKKTAWHTLITLKKALKN 258


>gi|303257069|ref|ZP_07343083.1| arginine biosynthesis bifunctional protein ArgJ [Burkholderiales
           bacterium 1_1_47]
 gi|302860560|gb|EFL83637.1| arginine biosynthesis bifunctional protein ArgJ [Burkholderiales
           bacterium 1_1_47]
          Length = 321

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 2/227 (0%)

Query: 33  NEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHL 92
           N     S R E +   A +  +  R +      +A            LK L++    C +
Sbjct: 95  NAPPPRSARPEPAAKPAYRSASEARGVRPEAYTEARIHQIATADWQTLKQLVQDCRACEI 154

Query: 93  CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-H 151
            S+ L  +         LM+IG  P   ++  G+PF G +G +LDK+L++ ++ R +   
Sbjct: 155 SSSRLHPVFGQGYPPCRLMLIGEAPGAEEDRLGQPFVGPSGKLLDKILEAAKLDREKDLC 214

Query: 152 ISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQ 211
           I       PP N      E   CRP + RQIELI P++++ +G    ++FF  D +    
Sbjct: 215 IFNTLKCRPPLNATPEKAETMACRPFLERQIELIDPEVIVAMGKPAASWFF-PDLKTLNP 273

Query: 212 NLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
             GK  NL         + T HP  L++ P  K+  W     +   L
Sbjct: 274 YRGKVHNLTVQGKPRKVIVTYHPSYLLRSPQEKRKAWLDWCLILDTL 320


>gi|296135025|ref|YP_003642267.1| phage SPO1 DNA polymerase-related protein [Thiomonas intermedia
           K12]
 gi|295795147|gb|ADG29937.1| phage SPO1 DNA polymerase-related protein [Thiomonas intermedia
           K12]
          Length = 288

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 61/237 (25%), Positives = 97/237 (40%), Gaps = 18/237 (7%)

Query: 28  FDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKAC-------SLHEL 80
             +P  EA  E      +     QP    R I  P    +  IA  A            L
Sbjct: 35  QAQPVPEAAPEVIATPATAKPVAQPPKPNRPIPPPRPTSSIPIADAARVEAIVRMDWDGL 94

Query: 81  KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML 140
           ++  ++   C L S+    +  + +     MIIG  P   ++  G+PF G  G +LD ML
Sbjct: 95  QAGAQACRACKLGSSRHQAVFGSGSTQARWMIIGEAPGAEEDRQGQPFVGAAGQLLDAML 154

Query: 141 QSIEIMRTQI------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           Q+I + R+        +I+ +    PPGNRN    E+  C P + RQ+ L+ P+++L +G
Sbjct: 155 QAIGLDRSADDPERAVYIANVLKCRPPGNRNPEPEEVGQCAPWLERQVALLQPQLILALG 214

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
               +    + A    Q  G+          IP + + HP  L++ P  K   W  L
Sbjct: 215 RFAAHSLLGSQA-PISQLRGQVHEFA----GIPVIVSYHPAYLLRNPADKARVWRDL 266


>gi|197104821|ref|YP_002130198.1| uracil-DNA glycosylase [Phenylobacterium zucineum HLK1]
 gi|196478241|gb|ACG77769.1| uracil-DNA glycosylase [Phenylobacterium zucineum HLK1]
          Length = 274

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 69/270 (25%), Positives = 110/270 (40%), Gaps = 13/270 (4%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYW-VFDEPNNEATYESQRKEKSIDSAIQPITNIRHI 59
           M            ++  F+A++GV   + DEP +          K     + P      +
Sbjct: 1   MPPAAPSDALIAESLLAFWAEAGVDGMLLDEPFDRIEAGKILPPKPAPPLVAPAVRPGPV 60

Query: 60  HSPLVQQADSIAQKAC------SLHELKSLLRSFHDCHLC--STSLSTICATQTEGQDLM 111
            SP    + +IAQ          +  L + + +F  C L     +   +C        LM
Sbjct: 61  ASPQPDVSAAIAQAQALAAQAQDMDALAAAIAAFEGCPLRFEGAASKAVCWRGEPSAPLM 120

Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEM 171
           +IG  P   ++  G PF G+ G +LD+ML +  +   +  I+    W PPGNR  S  E 
Sbjct: 121 VIGEGPGAEEDSQGLPFVGRAGKLLDRMLGAAGLT-GRALITNTVFWRPPGNRTPSPHEQ 179

Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS--IIPTL 229
            IC P + R I L  P++LL +G  +       D        G+W    +      +P +
Sbjct: 180 LICAPFLERAIALTQPRMLLLVGGASAKSLLKKDEGILS-LRGRWFEWRSSDGALELPAM 238

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALK 259
            T+HP  L++ P  KK  W  L+TL + L 
Sbjct: 239 PTLHPAFLLRQPGAKKRAWSDLLTLAERLD 268


>gi|113868094|ref|YP_726583.1| bacteriophage-type DNA polymerase [Ralstonia eutropha H16]
 gi|113526870|emb|CAJ93215.1| Putative DNA polymerase bacteriophage-type,uracil-DNA glycosylase
           superfamily [Ralstonia eutropha H16]
          Length = 289

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 46/198 (23%), Positives = 82/198 (41%), Gaps = 6/198 (3%)

Query: 60  HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSD 119
                Q     A  +     L + +     C LC    +T+        + M++G  P +
Sbjct: 88  EPGSAQADREAAIASMEWPALDAAVAGCTACGLCQHRTNTVFGVGDRQAEWMLVGEAPGE 147

Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPII 178
           ++++ G+PF G+ G +LD ML ++ + R   + I+ +    PPGNRN    E+  C P +
Sbjct: 148 NEDLQGEPFVGQAGKLLDNMLGALGLARGRNVFIANVLKCRPPGNRNPEPEEVAQCEPFL 207

Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238
            RQI L+ P +++ +G                +  G   +       IP + T HP  L+
Sbjct: 208 RRQIALVKPSVIVVLGRFAAQSLL-RSTTPIGKLRGTVHSYE----GIPVVVTYHPAYLL 262

Query: 239 QYPLIKKNTWHALITLKK 256
           +    K   W  L   ++
Sbjct: 263 RTLTDKARAWEDLCLARE 280


>gi|288574896|ref|ZP_06393253.1| phage SPO1 DNA polymerase-related protein [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288570637|gb|EFC92194.1| phage SPO1 DNA polymerase-related protein [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 206

 Score =  182 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 49/190 (25%), Positives = 88/190 (46%), Gaps = 10/190 (5%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L  L   + S   C LC      +         LM +G  P + ++ SG PF G+ G +L
Sbjct: 15  LARLSHEVSSCRRCDLCKERTQPVLGEGPPDAALMFVGEGPGEDEDRSGIPFVGRAGRLL 74

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           DK+L++ +I R  ++I+ +    PP NR     E  +C+  +  QI +I+P+I++ +GN 
Sbjct: 75  DKILEAAKIDRKGVYITNVVKCRPPKNRTPMVEETMVCQRFLEAQIAVINPRIIVCLGNT 134

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK-----NTWHAL 251
              +F    ++   +  G+W +       I  +   HP  L++    KK      TW  +
Sbjct: 135 PMKWFLG-TSEGITKLRGQWFSW----KGIDVMPMFHPSYLLRNESRKKNSPKALTWRDI 189

Query: 252 ITLKKALKNL 261
           + +++ L  L
Sbjct: 190 LEVRRRLDEL 199


>gi|332531590|ref|ZP_08407487.1| putative DNA polymerase-like protein [Hylemonella gracilis ATCC
           19624]
 gi|332038953|gb|EGI75382.1| putative DNA polymerase-like protein [Hylemonella gracilis ATCC
           19624]
          Length = 283

 Score =  182 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 51/270 (18%), Positives = 101/270 (37%), Gaps = 32/270 (11%)

Query: 19  YADSGVYWVFDEPNNEATYESQRKEKSIDSAIQ---------------------PITNIR 57
             + GV      P +  +           +  +                     P+    
Sbjct: 11  LEEMGVRVW--APRDAVSAPETAPAPPFQNLPEGSREGQAAPRPAAPRVPPTQVPVPVAM 68

Query: 58  HIHSPLVQQADSIAQ--KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115
                 V  +  +     A    +L++ +     C LC +  +T+          +I+G 
Sbjct: 69  VSDRAAVAPSRDLPADIAAMGWDDLEAAVAGCQACGLCKSRKNTVFGVGQRQARWLIVGE 128

Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR------TQIHISMISPWHPPGNRNLSNI 169
            P +++++ G+PF G+ G +LD ML+++   R        ++I+ +    PPGNRN +  
Sbjct: 129 APGENEDLQGEPFVGQAGKLLDNMLKTLGRSRTSDDEAQSVYIANVLKCRPPGNRNPAPE 188

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPT 228
           E+  C P + RQ+ L+ P+I+L +G         +         LG+       +  +P 
Sbjct: 189 EVLQCEPYLRRQVALLQPRIILALGRFAVQSLLQHSVPDVATLPLGRLRGQVYRYEGVPV 248

Query: 229 LATVHPQELIQYPLIKKNTWHALITLKKAL 258
           + + HP  L++ P  K   W  L   +  +
Sbjct: 249 VVSYHPAYLLRTPQDKAKAWDDLCLAQSLM 278


>gi|170696493|ref|ZP_02887618.1| phage SPO1 DNA polymerase-related protein [Burkholderia graminis
           C4D1M]
 gi|170138596|gb|EDT06799.1| phage SPO1 DNA polymerase-related protein [Burkholderia graminis
           C4D1M]
          Length = 390

 Score =  182 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 55/246 (22%), Positives = 90/246 (36%), Gaps = 19/246 (7%)

Query: 26  WVFDEPNNEATYESQRKEKSIDSAIQP----------ITNIRHIHSPLVQQADSIAQKAC 75
              DEP   A  +  R  +       P            +               A    
Sbjct: 142 AASDEP---AVAQPPRPSEPSSFDAPPDDGFAWFDDLPLHPPGEGDADAAMPALPAIDTL 198

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
               L   + +   C LC     T+        D M+IG  P ++++  G+PF G+ G +
Sbjct: 199 DWDALSERVSTCERCRLCEKRTKTVFGVGDRNADWMLIGEAPGENEDRVGEPFVGQAGKL 258

Query: 136 LDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           LD ML+S+ + R    +I+ +    PPGNRN    E+  C P + RQ+ L+ PK+++ +G
Sbjct: 259 LDNMLRSLTLARDSNVYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVALVKPKLIVALG 318

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
                     DA       G+          +P + T HP  L++    K   W  L   
Sbjct: 319 RFAAQSLLKTDA-SISSLRGRVHEYE----GVPVIVTYHPAYLLRSLPDKAKAWADLCLA 373

Query: 255 KKALKN 260
           +   + 
Sbjct: 374 RDTWRE 379


>gi|167590014|ref|ZP_02382402.1| phage SPO1 DNA polymerase-related protein [Burkholderia ubonensis
           Bu]
          Length = 307

 Score =  182 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 54/253 (21%), Positives = 97/253 (38%), Gaps = 22/253 (8%)

Query: 21  DSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSP----------------LV 64
           D+G   +     + A      ++ +    + P  + R +                     
Sbjct: 29  DAGTPPLEAHAPSAAGERIASRQAARTDDVAPPADARPVEDDDFAWFDAAPPADPAPVAE 88

Query: 65  QQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNIS 124
            +A            L + +     C LC    +T+        D M++G  P ++++  
Sbjct: 89  LRAAETPVAELDWDALAARVADCTRCRLCEKRTNTVFGVGDREADWMLVGEAPGENEDKQ 148

Query: 125 GKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE 183
           G+PF G+ G +LD MLQS+ + R   ++I+ +    PPGNRN    E+  C P + RQ+ 
Sbjct: 149 GEPFVGQAGKLLDNMLQSLSLERGANVYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVA 208

Query: 184 LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI 243
           L+ PK+++ +G          DA       G+          +P + T HP  L++    
Sbjct: 209 LVKPKLIVALGRFAAQTLLKTDASIAS-LRGRVHAYE----GVPVIVTYHPAYLLRSLQD 263

Query: 244 KKNTWHALITLKK 256
           K   W  L   + 
Sbjct: 264 KSKAWADLCLARD 276


>gi|218295021|ref|ZP_03495857.1| phage SPO1 DNA polymerase-related protein [Thermus aquaticus
           Y51MC23]
 gi|218244224|gb|EED10749.1| phage SPO1 DNA polymerase-related protein [Thermus aquaticus
           Y51MC23]
          Length = 204

 Score =  182 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 11/192 (5%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           +L  L++  ++   C L       +        +LMI+G  P + ++ +G PF GK G +
Sbjct: 2   TLEVLEAQAKACTACRLAEGRTQVVFGEGNPDANLMIVGEGPGEEEDKTGHPFVGKAGQL 61

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC-RPIIMRQIELISPKILLFIG 194
           L+++L++  I R +I+I+ I    PPGNR     E +IC    +++QIELI+P+I++ +G
Sbjct: 62  LNRILEAAGIRREEIYITNIVKCRPPGNRAPLPDEAKICTDRWLLKQIELIAPQIIVPLG 121

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWH 249
                FF         +  G+W         I      HP  L++ P       K  TW 
Sbjct: 122 AVAAEFFLGEK-VSITKVRGQWYEW----HGIKVFPMFHPAYLLRNPSRAPGSPKHLTWL 176

Query: 250 ALITLKKALKNL 261
            +  +K+AL+ L
Sbjct: 177 DIQEVKRALQAL 188


>gi|117926680|ref|YP_867297.1| phage SPO1 DNA polymerase-related protein [Magnetococcus sp. MC-1]
 gi|117610436|gb|ABK45891.1| phage SPO1 DNA polymerase-related protein [Magnetococcus sp. MC-1]
          Length = 300

 Score =  182 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 6/226 (2%)

Query: 35  ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94
           A   ++R       A     +   I +P  Q  +  A KA +L  +    ++   C LC 
Sbjct: 73  AAAPAKRPRLPQPVAPAHKPDETPIVTPP-QPLNLPAGKAAALEHIAQHCQACQRCDLCR 131

Query: 95  TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154
           T    +         ++ +G  P   ++  G+PF G  G +LD+M+ +I + R  ++I+ 
Sbjct: 132 TRTQAVPGIGHPDAPVVFVGEAPGAEEDRIGQPFVGPAGQLLDRMMATIGLQREHVYIAN 191

Query: 155 ISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLG 214
           +    PPGNRN    E+ +C+  + +Q+E+ISPK++  +G         +          
Sbjct: 192 VVKCRPPGNRNPQTHEVALCQGYLHQQLEVISPKVIFALGRFAIQSLLGSTDSVAAIRR- 250

Query: 215 KWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
                      IP LA+ HP   ++ P  KK+ W  LI L++ L+N
Sbjct: 251 ----HEHSWRGIPVLASYHPAFYLRTPTRKKDGWLDLIRLQQLLEN 292


>gi|224372523|ref|YP_002606895.1| uracil-DNA glycosylase [Nautilia profundicola AmH]
 gi|223588852|gb|ACM92588.1| uracil-DNA glycosylase [Nautilia profundicola AmH]
          Length = 210

 Score =  181 bits (460), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 6/186 (3%)

Query: 74  ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
              L EL+ +  +   C L  T    +        DLM IG  P   ++ +G+PF G+ G
Sbjct: 30  PKELDELEKICLNCTLCDLSKTRTHVVFGEGNPNADLMFIGEGPGAEEDKTGRPFVGRAG 89

Query: 134 NML-DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192
            +L   +L  +E+ R  ++I+ I    PP NR  +  E E C+P +++QI++I+PKIL+ 
Sbjct: 90  KLLTKIILNVLELTREDVYIANIVKCRPPNNRVPTIEEAETCKPYLLKQIDIINPKILVC 149

Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
           +G      +  N      +  G+             + T HP  L++ P  KK  +   +
Sbjct: 150 LGKTAF-MYLMNTDMPISKVRGQIFEFKEK----KVIPTFHPSFLLRNPSAKKEAYKDFL 204

Query: 253 TLKKAL 258
            +K  L
Sbjct: 205 LIKSML 210


>gi|226227093|ref|YP_002761199.1| putative DNA glycosylase [Gemmatimonas aurantiaca T-27]
 gi|226090284|dbj|BAH38729.1| putative DNA glycosylase [Gemmatimonas aurantiaca T-27]
          Length = 293

 Score =  181 bits (460), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 50/235 (21%), Positives = 96/235 (40%), Gaps = 10/235 (4%)

Query: 30  EPNNEATYESQRKEKSIDSAIQ-----PITNIRHIHSPLVQQADSIAQKACSLHELKSLL 84
            P       + R  +S+           I       +P          +  +L +L   +
Sbjct: 47  APVKRTAPAAGRVAESVAQLPAWLEALGIPAGLEAGAPQPTSVAPDIAQLPTLEQLAQHV 106

Query: 85  RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIE 144
                C L +++ + +        D + +G  P  +++  G+PF G  G +L K+L +I+
Sbjct: 107 AGCQRCALHASAKNPVPGEGNPEADFLCVGEAPGANEDAQGRPFVGDAGQLLTKILGAIQ 166

Query: 145 IMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204
           + R  ++I  +    PPGNR+    E++ C+P ++RQIEL+ PK++L +G          
Sbjct: 167 LSRESVYICNVLKHRPPGNRDPLPDEVQACQPYLLRQIELVRPKVILALGRFAAQTLLQ- 225

Query: 205 DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
                    G+          +P + T HP  L++    K+ TW  +   ++ L 
Sbjct: 226 TTTSIGVLRGRIH----RFHGVPLIVTYHPAALLRNESWKRPTWEDVKLARRVLD 276


>gi|46198674|ref|YP_004341.1| uracil-DNA glycosylase [Thermus thermophilus HB27]
 gi|21464612|emb|CAD29336.1| uracil-DNA glycosylase [Thermus thermophilus HB27]
 gi|46196297|gb|AAS80714.1| uracil-DNA glycosylase [Thermus thermophilus HB27]
          Length = 205

 Score =  181 bits (460), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 11/192 (5%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           +L  L++  ++   C L       +         LMI+G  P + ++ +G+PF GK G +
Sbjct: 2   TLELLQAQAQNCTACRLAEGRTRVVFGEGNPDAKLMIVGEGPGEEEDKTGRPFVGKAGQL 61

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC-RPIIMRQIELISPKILLFIG 194
           L+++L++  I R +++I+ I    PP NR     E +IC    +++QIELI+P+I++ +G
Sbjct: 62  LNRILEAAGIPREEVYITNIVKCRPPQNRAPLPDEAKICTDKWLLKQIELIAPQIIVPLG 121

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWH 249
                FF         +  GKW         I      HP  L++ P       K  TW 
Sbjct: 122 AVAAEFFLGEK-VSITKVRGKWYEW----HGIKVFPMFHPAYLLRNPSRAPGSPKHLTWL 176

Query: 250 ALITLKKALKNL 261
            +  +K+AL  L
Sbjct: 177 DIQEVKRALDAL 188


>gi|147679076|ref|YP_001213291.1| uracil-DNA glycosylase [Pelotomaculum thermopropionicum SI]
 gi|146275173|dbj|BAF60922.1| uracil-DNA glycosylase [Pelotomaculum thermopropionicum SI]
          Length = 202

 Score =  181 bits (459), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 5/188 (2%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            SL ELK++  +   C L S     +         LM+IG  P   ++  G+PF GK G 
Sbjct: 16  NSLEELKAMAVACTRCGLRSGCSGVVFGEGNPEARLMLIGEGPGADEDRMGRPFVGKAGQ 75

Query: 135 MLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
           +LDK+L++  + R    +I+ +    PPGNR     E   C P + RQIEL+SP I++ +
Sbjct: 76  LLDKILEAAGLERFTHTYIANVVKCRPPGNRVPRPDEAARCLPWLYRQIELVSPGIIVLL 135

Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253
           G+       +  A +  +  G+W       S I  + T HP  L++    K+  W     
Sbjct: 136 GSTALQNLIDP-AARITEMRGRWL---VSKSGIKIMPTYHPAALLRDVSKKRPVWEDFQK 191

Query: 254 LKKALKNL 261
           ++   + +
Sbjct: 192 VRDEYRKI 199


>gi|255262434|ref|ZP_05341776.1| uracil-DNA glycosylase [Thalassiobium sp. R2A62]
 gi|255104769|gb|EET47443.1| uracil-DNA glycosylase [Thalassiobium sp. R2A62]
          Length = 270

 Score =  181 bits (459), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 59/265 (22%), Positives = 103/265 (38%), Gaps = 25/265 (9%)

Query: 14  TIALFYADSGVYWV-FDEPNNEATYESQRKEKSIDSA-----------IQPITNIRHIHS 61
            +  +  + GV     D P N     +   +                      +   + +
Sbjct: 12  AMLGWQVELGVDEATLDAPVNRYEIPAAAPKVETQPVELPKAKATPPPAAAAPDPVALAN 71

Query: 62  PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121
             V  A   AQ A S+  L   + +F  C L   + ST+         +MIIG  P+  +
Sbjct: 72  EAVNAARLAAQNATSIETLTETVNAFEHCELKRGARSTLLGVGAASAPVMIIGEPPNRDE 131

Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQI------HISMISPWHPPGNRNLSNIEMEICR 175
           +  G+ F G  G +LD+ML +I   R          ++ + PW PP     +  E+ +  
Sbjct: 132 DREGRAFVGAAGQLLDRMLAAIGRDRNATDPETGVFVASVMPWRPPNRD-PNATELAMTM 190

Query: 176 PIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
           P + R +EL+ PKI++ +GN +       +     +  G+W          P L   +P+
Sbjct: 191 PFLERLVELVDPKIVILMGNVSCQAALGRNG--ITRLRGQWLT----GFNRPVLPMFNPE 244

Query: 236 ELIQYPLIKKNTWHALITLKKALKN 260
            L++ P  K+  WH L+ +K  L  
Sbjct: 245 FLLRTPAAKREAWHDLLMVKAKLNE 269


>gi|291296318|ref|YP_003507716.1| phage SPO1 DNA polymerase-related protein [Meiothermus ruber DSM
           1279]
 gi|290471277|gb|ADD28696.1| phage SPO1 DNA polymerase-related protein [Meiothermus ruber DSM
           1279]
          Length = 205

 Score =  181 bits (459), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 11/192 (5%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           +L  L +  ++   C L       +         LMI+G  P + +++ G+PF G++G +
Sbjct: 2   NLELLAAQAKACTACGLARQRTHVVFGEGNPDAKLMIVGEGPGEDEDLQGRPFVGRSGQL 61

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP-IIMRQIELISPKILLFIG 194
           LDK+L++  I R  ++I+ I    PPGNR    +E + C    +++QI+L+ P+I++ +G
Sbjct: 62  LDKILEAAGIPRASVYIANIVKCRPPGNRAPEPLEAKTCTSLWLVKQIQLVKPQIIIPLG 121

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWH 249
                FF         +  GK+         I      HP  L++ P       K  TW 
Sbjct: 122 ATALEFFAGEKL-SITKARGKFFEWQ----GIRIFPMFHPAYLLRNPSREAGSPKHLTWQ 176

Query: 250 ALITLKKALKNL 261
            +  +KK L  L
Sbjct: 177 DIQLVKKTLDEL 188


>gi|186476121|ref|YP_001857591.1| phage SPO1 DNA polymerase-like protein [Burkholderia phymatum
           STM815]
 gi|184192580|gb|ACC70545.1| phage SPO1 DNA polymerase-related protein [Burkholderia phymatum
           STM815]
          Length = 341

 Score =  181 bits (459), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 48/205 (23%), Positives = 86/205 (41%), Gaps = 6/205 (2%)

Query: 53  ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMI 112
                        +             L++ + +   C LC    +T+        D M+
Sbjct: 129 PAGPPSDLEANTSEPVQPGIDTLDWAALEARVSACERCRLCERRTNTVFGVGDREADWML 188

Query: 113 IGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEM 171
           IG  P ++++  G+PF G+ G +LD ML+S+ + R T ++I+ +    PPGNRN    E+
Sbjct: 189 IGEAPGENEDKQGEPFVGQAGKLLDNMLRSLGLARGTNVYIANVIKCRPPGNRNPERDEV 248

Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231
             C P + RQ+ L+ PK+++ +G          +A       G+          +P + T
Sbjct: 249 ARCEPYLQRQVALVKPKLIIALGRFAAQSLLKTEA-SISSLRGRVYEYE----GVPVVVT 303

Query: 232 VHPQELIQYPLIKKNTWHALITLKK 256
            HP  L++    K  +W  L   + 
Sbjct: 304 YHPAYLLRSLGDKAKSWQDLCLARD 328


>gi|152992742|ref|YP_001358463.1| uracil-DNA glycosylase [Sulfurovum sp. NBC37-1]
 gi|151424603|dbj|BAF72106.1| uracil-DNA glycosylase [Sulfurovum sp. NBC37-1]
          Length = 222

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 52/188 (27%), Positives = 94/188 (50%), Gaps = 6/188 (3%)

Query: 74  ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
             +L  L+    + H C L  +    +        D++IIG  P  +++ +GKPF G++G
Sbjct: 39  PDTLDSLQKQAINCHLCDLSKSRQKVVFGEGNPHADILIIGEGPGATEDSTGKPFVGRSG 98

Query: 134 NMLDKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192
            +L KML+++  + R  ++I+ I    PP NR  +  E   C+P +++QIELI PK++L 
Sbjct: 99  ELLSKMLENVLGLKRADVYITNIVKCRPPNNRAPTPTEAHTCQPYLLKQIELIKPKLILT 158

Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
           +G    ++   +D     +  G        H     + T HP  L++ P  KK  +  L+
Sbjct: 159 LGATAYHYLTGDDT-GITKVRGSIH----KHGNATLIPTYHPSYLLRNPSAKKEVFEDLL 213

Query: 253 TLKKALKN 260
            +K+ +K+
Sbjct: 214 KVKELMKS 221


>gi|295676848|ref|YP_003605372.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp.
           CCGE1002]
 gi|295436691|gb|ADG15861.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp.
           CCGE1002]
          Length = 332

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 56/242 (23%), Positives = 90/242 (37%), Gaps = 18/242 (7%)

Query: 28  FDEPNNEATYESQRKEKSIDSAIQ------------PITNIRHIHSPLVQQADSIAQKAC 75
           FDE          + + S   A              P  +               A    
Sbjct: 82  FDETAARRETSQPQPDFSAPPAFDAPLDDDFAWFDDPTASTPAPAEARRAAPALPAVHTL 141

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
               L   +     C LC    +T+        D M+IG  P ++++  G+PF G+ G +
Sbjct: 142 DWDALAERVAGCEACRLCEKRTNTVFGVGDREADWMLIGEAPGENEDRQGEPFVGQAGKL 201

Query: 136 LDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           LD ML S+ + R T ++I+ +    PPGNRN    E+  C P + RQ+ L+ PK+++ +G
Sbjct: 202 LDNMLHSLALARGTNVYIANVIKCRPPGNRNPQPDEVARCEPYLQRQVSLVKPKLIVALG 261

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
                     DA       G+          +P + T HP  L++    K   W  L   
Sbjct: 262 RFAAQSLLKTDA-SISSLRGRVHTYE----GVPVIVTYHPAYLLRSLPDKAKAWTDLCLA 316

Query: 255 KK 256
           + 
Sbjct: 317 RA 318


>gi|294339041|emb|CAZ87390.1| putative Uracil-DNA glycosylase [Thiomonas sp. 3As]
          Length = 286

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 12/229 (5%)

Query: 35  ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKAC-SLHELKSLLRSFHDCHLC 93
           AT  + +         +PI   R   S  +  A  I   A     EL++  ++   C L 
Sbjct: 47  ATPAAAKPVAQPPKPNRPIPPPRPASSIPITDAARIEAIARMDWDELQAGAQACRACKLG 106

Query: 94  STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI--- 150
           S+    +  + +     MIIG  P   ++  G+PF G  G +LD MLQ+I + R+     
Sbjct: 107 SSRHQAVFGSGSTQARWMIIGEAPGAEEDRQGQPFVGAAGQLLDAMLQAIGLDRSADDPE 166

Query: 151 ---HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207
              +I+ +    PPGNRN    E+  C P + RQ+ L+ P+++L +G    +    + A 
Sbjct: 167 RAVYIANVLKCRPPGNRNPEPEEVAQCAPWLERQVALLQPQLILALGRFAAHSLLGSQA- 225

Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
              Q  G+          +P + + HP  L++ P  K   W  L   + 
Sbjct: 226 PISQLRGQVHEFA----GVPVIVSYHPAYLLRNPADKARVWRDLCFARD 270


>gi|323526514|ref|YP_004228667.1| phage SPO1 DNA polymerase-like protein [Burkholderia sp. CCGE1001]
 gi|323383516|gb|ADX55607.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp.
           CCGE1001]
          Length = 344

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 95/238 (39%), Gaps = 16/238 (6%)

Query: 34  EATYESQRKEKSIDSAIQPITNI-------RHIHSPLVQQADSIAQKA---CSLHELKSL 83
            A + ++    S  S+     +          +H P    A   A  A        L   
Sbjct: 94  RAPHVAEPPATSEPSSFGAPPDDGFAWFDDLPLHPPGEAHAAVPALPAIHTLDWDALSER 153

Query: 84  LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143
           + +   C LC      +        D M+IG  P ++++  G+PF G+ G +LD ML+S+
Sbjct: 154 VANCERCRLCEKRTQAVFGVGDRNADWMLIGEAPGENEDRVGEPFVGQAGKLLDNMLRSL 213

Query: 144 EIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202
            + R   ++I+ +    PPGNRN    E+  C P + RQ+EL+ PK+++ +G        
Sbjct: 214 TLARGANVYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVELVKPKLIVALGRFAAQSLL 273

Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
             DA       G+          +P + T HP  L++    K   W  L   +   + 
Sbjct: 274 KTDA-SISSLRGRVHQYE----GVPVIVTYHPAYLLRSLPDKAKAWADLCLARDTWRE 326


>gi|325972111|ref|YP_004248302.1| phage SPO1 DNA polymerase-related protein [Spirochaeta sp. Buddy]
 gi|324027349|gb|ADY14108.1| phage SPO1 DNA polymerase-related protein [Spirochaeta sp. Buddy]
          Length = 249

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 6/185 (3%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           ++ +L++L+     C LC T    +    +    LM+IG  P   ++ SGKPF GK G  
Sbjct: 63  NVRQLEALVALCTKCRLCETRKQVVFGEGSIPARLMVIGEGPGFEEDASGKPFVGKAGKY 122

Query: 136 LDKMLQSIEIMRTQ-IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           LD  L +I + R+  ++I+ I    PP NR+    E++ C P + RQI+L+ P+I+L +G
Sbjct: 123 LDSWLGAIHMDRSNAVYIANIVKCRPPENRDPEVDEVQACLPYLKRQIQLVKPQIILLVG 182

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
           +                  GK       +  +P + T HP  +++   +K+  W  L  +
Sbjct: 183 SVAARSLLGVSDGV-----GKLRGRFLRYEDVPVVVTYHPAAVLRNMELKRPVWDDLKKI 237

Query: 255 KKALK 259
              L 
Sbjct: 238 AAYLD 242


>gi|239616610|ref|YP_002939932.1| phage SPO1 DNA polymerase-related protein [Kosmotoga olearia TBF
           19.5.1]
 gi|239505441|gb|ACR78928.1| phage SPO1 DNA polymerase-related protein [Kosmotoga olearia TBF
           19.5.1]
          Length = 207

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 8/185 (4%)

Query: 82  SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
             +   + C L  T  + +    +    ++ +G  P   ++ +G+PF G+ G +L K+L+
Sbjct: 16  RKIEECNLCPLHLTRTNVVPGEGSLDSPVVFVGEGPGADEDATGRPFVGRAGKLLTKILE 75

Query: 142 SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
           S+ + R  ++I+ I    PP NR  +  EM+ C P ++ Q+ +I PK+++ +G      F
Sbjct: 76  SVGLSREDVYITNIVKCRPPNNRTPTLQEMKACEPYLLSQLAVIKPKLIVCLGATALAAF 135

Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWHALITLKK 256
             ++  +  +  GK  +    H  I      HP  L++ P       K+ TW  +  ++K
Sbjct: 136 LESEKVQITKYRGKLFDW---HGGIKVFGMFHPSYLLRNPSTAPGSPKRLTWEDIQKVRK 192

Query: 257 ALKNL 261
               +
Sbjct: 193 MYDQV 197


>gi|119898004|ref|YP_933217.1| DNA-directed DNA polymerase [Azoarcus sp. BH72]
 gi|119670417|emb|CAL94330.1| DNA-directed DNA polymerase [Azoarcus sp. BH72]
          Length = 283

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 6/185 (3%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             EL++ +R+   C LC      +         +M +G  P   ++  G+PF G+ G +L
Sbjct: 101 WDELEADIRACTACALCQRRKQAVPGVGDREARVMFVGEGPGAEEDQRGEPFVGQAGKLL 160

Query: 137 DKMLQSIEIMRTQ-IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           D ML +I + R + ++I+      PP NR     E+  C P + RQI L+ P++L+ +G 
Sbjct: 161 DNMLAAIGLRRGEGVYIANSVKCRPPLNRTPEAGEIATCLPYLERQIALVQPRLLVALGR 220

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
                  + +     +  G+        + IP L T HP  L++ P  K   W  L  ++
Sbjct: 221 PAAQSLLDTE-IAITKARGRAFE----RAGIPVLVTYHPAYLLRNPQDKAKAWEDLCLVR 275

Query: 256 KALKN 260
           + L  
Sbjct: 276 RTLAQ 280


>gi|297566593|ref|YP_003685565.1| phage SPO1 DNA polymerase-like protein [Meiothermus silvanus DSM
           9946]
 gi|296851042|gb|ADH64057.1| phage SPO1 DNA polymerase-related protein [Meiothermus silvanus DSM
           9946]
          Length = 205

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 11/192 (5%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           +L  L +  +    C L  T    +         + I+G  P + ++ +G+PF GK G +
Sbjct: 2   NLELLAAQAQVCTACRLAKTRTKVVFGEGNPDAKVFIVGEGPGEEEDKTGRPFVGKAGQL 61

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP-IIMRQIELISPKILLFIG 194
           LD++L++  I R  I+IS I    PP NR     E++ C    + +Q+ELI P+I++ +G
Sbjct: 62  LDRILEAAGIPRESIYISNIVKCRPPQNRVPLPDEVKACTSLWLNKQLELIRPQIIVPLG 121

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWH 249
                FF         +  G+W +       I      HP  L++ P       K  TW 
Sbjct: 122 ATAAEFFLGEK-VSITKIRGQWMDW----HGILLFPMFHPAYLLRNPSRAAGSPKHLTWL 176

Query: 250 ALITLKKALKNL 261
            +  LK+ + +L
Sbjct: 177 DIQALKQKMDSL 188


>gi|196228387|ref|ZP_03127254.1| phage SPO1 DNA polymerase-related protein [Chthoniobacter flavus
           Ellin428]
 gi|196227790|gb|EDY22293.1| phage SPO1 DNA polymerase-related protein [Chthoniobacter flavus
           Ellin428]
          Length = 302

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 47/231 (20%), Positives = 97/231 (41%), Gaps = 14/231 (6%)

Query: 40  QRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCH-LCSTSLS 98
           +   + + +A +        H    + A     KA  L  ++  + +   C  L  +   
Sbjct: 65  KPASEPVKAAARVSETAPVSHYDGPRMAPLEGSKAERLAAMRGPVLACTKCPHLVKSRTQ 124

Query: 99  TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158
            +        +LM +G  P + ++  G+PF GK G +L K+++++   R  ++I+ +   
Sbjct: 125 VVFGVGNPEAELMFVGEAPGEDEDRQGEPFVGKAGQLLTKIIETMGFARGDVYIANVLKC 184

Query: 159 H------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN 212
                   PGNR     EM+ C P +  QI++I P++L+ +G         +      + 
Sbjct: 185 RPDMPPGMPGNRKPKVEEMQTCLPYLREQIDIIRPRLLVALGATAMEGLTGST-DSMSRL 243

Query: 213 LGKWSNLCTPHSIIPTLATVHPQELIQYPLI--KKNTWHALITLKKALKNL 261
            G+W +        P +AT HP  L++   +  K+  W  ++ + + L  +
Sbjct: 244 RGRWHDF----HGTPLMATYHPAYLLRNQSLSEKRKVWEDMLMVLERLGKM 290


>gi|55980687|ref|YP_143984.1| uracil-DNA glycosylase [Thermus thermophilus HB8]
 gi|38493048|pdb|1UI0|A Chain A, Crystal Structure Of Uracil-Dna Glycosylase From Thermus
           Thermophilus Hb8
 gi|32698481|dbj|BAC79245.1| uracil-DNA glycosylase [Thermus thermophilus]
 gi|55772100|dbj|BAD70541.1| uracil-DNA glycosylase [Thermus thermophilus HB8]
          Length = 205

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 11/192 (5%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           +L  L++  ++   C L       +         LMI+G  P + ++ +G+PF GK G +
Sbjct: 2   TLELLQAQAQNCTACRLMEGRTRVVFGEGNPDAKLMIVGEGPGEEEDKTGRPFVGKAGQL 61

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC-RPIIMRQIELISPKILLFIG 194
           L+++L++  I R +++I+ I    PP NR     E +IC    +++QIELI+P+I++ +G
Sbjct: 62  LNRILEAAGIPREEVYITNIVKCRPPQNRAPLPDEAKICTDKWLLKQIELIAPQIIVPLG 121

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWH 249
                FF         +  GKW         I      HP  L++ P       K  TW 
Sbjct: 122 AVAAEFFLGEK-VSITKVRGKWYEW----HGIKVFPMFHPAYLLRNPSRAPGSPKHLTWL 176

Query: 250 ALITLKKALKNL 261
            +  +K+AL  L
Sbjct: 177 DIQEVKRALDAL 188


>gi|189426388|ref|YP_001953565.1| phage SPO1 DNA polymerase-related protein [Geobacter lovleyi SZ]
 gi|189422647|gb|ACD97045.1| phage SPO1 DNA polymerase-related protein [Geobacter lovleyi SZ]
          Length = 249

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 102/254 (40%), Gaps = 27/254 (10%)

Query: 9   QEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQAD 68
              +        +SGV  +  E   +    ++ +E       QP+  +            
Sbjct: 10  YASVREYLQELEESGVDGLPFEELQQTV--NRGREPEQQRQEQPLPAVLQG--------- 58

Query: 69  SIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128
                   L  L+  +     C L  +  + +     E   L+ +G  P   ++  G+PF
Sbjct: 59  --------LEGLRRKIGDCQRCDLAQSRTNLVFGAGPEKARLVFVGEAPGADEDRQGQPF 110

Query: 129 SGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188
            G+ G +L ++++++ + RTQ++I  +    PP NRN    E+  C P + +Q+++I P+
Sbjct: 111 VGEAGQVLTRLIEAMGLKRTQVYICNVLKCRPPANRNPHKDEIATCSPFLQQQLQIIKPE 170

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK--- 245
           +++ +G            +   +  G++ +       IP + T HP  L+     K+   
Sbjct: 171 VIVALGTFAAQTLL-ETKEPISRMRGQFHSW----HGIPVMPTFHPSFLLHNKENKQHYW 225

Query: 246 NTWHALITLKKALK 259
           + W  +  + + LK
Sbjct: 226 DVWSDMEQVLRKLK 239


>gi|240141067|ref|YP_002965547.1| putative phage DNA polymerase [Methylobacterium extorquens AM1]
 gi|240011044|gb|ACS42270.1| putative phage DNA polymerase [Methylobacterium extorquens AM1]
          Length = 337

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 80/329 (24%), Positives = 129/329 (39%), Gaps = 71/329 (21%)

Query: 1   MTSKRILSQE--QILTIALFYADSGVYWVFDE-PNNEATYE------------------- 38
           MT+    +     +++   F+  +GV  V DE P++                        
Sbjct: 4   MTANHADTDARGDLISYLDFHVAAGVDAVLDEQPHDRFAEAESVRAEAALQAEPATRREP 63

Query: 39  -------------------------SQRKEKSIDSAIQPI----TNIRHIHSPLVQQADS 69
                                    S+  ++   SA +P       +    +P  +   +
Sbjct: 64  LESRREPLEPRREPLPPRREALEPRSESPQRDAPSAEEPPLAFRRELPSRDAPAREPPRT 123

Query: 70  IAQKA------------------CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLM 111
               A                   +L EL+ LLR F  C L  T+ + + A       +M
Sbjct: 124 YGNAAGAKPGEAADDARARAAQMKTLEELEELLRGFEGCGLRFTAKNLVFADGNPQARVM 183

Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEM 171
            +G  P   ++  GKPF G++G +LD+M+ +I + RT  +IS + PW PPGNRN +  E+
Sbjct: 184 FVGEAPGADEDRIGKPFMGRSGQLLDRMMAAIGLDRTSAYISNVVPWRPPGNRNPTPQEI 243

Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP-HSIIPTLA 230
            ICRP + RQIEL +P IL+ +G                +  G++          I  LA
Sbjct: 244 SICRPFVERQIELANPDILVCLGAPATQTLTGTK-DGILKARGRFYPYRLGDGREIRALA 302

Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALK 259
           T+HP  L++ P+ K+  W     LK AL 
Sbjct: 303 TLHPAYLLRQPVQKRLAWRDFRMLKSALD 331


>gi|223935707|ref|ZP_03627623.1| phage SPO1 DNA polymerase-related protein [bacterium Ellin514]
 gi|223895715|gb|EEF62160.1| phage SPO1 DNA polymerase-related protein [bacterium Ellin514]
          Length = 307

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 99/240 (41%), Gaps = 16/240 (6%)

Query: 30  EPNNEATYESQRKEKSIDSAIQPIT--NIRHIHSPLVQQADSIAQKACSLHELKSLLRSF 87
            P       +         A++P     I    +P+     S   K  +  +L+S   S 
Sbjct: 58  APAVRQAVVAPVPAPVEIPAVKPAALFPISPAETPITVAPLSPEAKVAAFADLRSRAMSC 117

Query: 88  HDC-HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM 146
             C HL ++  + +    +    LM +G  P   ++  G+PF GK G +L K++Q++ + 
Sbjct: 118 VKCAHLAASRKNVVFGVGSIDAQLMFVGEAPGADEDEQGEPFVGKAGQLLTKIIQTMGLQ 177

Query: 147 RTQIHISMISPWHPP------GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF 200
           R  ++I+ I    P       GNR  ++ EM  C P +  QI+LI PK+L+ +G      
Sbjct: 178 RGDVYIANILKCRPDTPGQSAGNRKPTSEEMATCIPYLHEQIDLIRPKVLVALGATAVEG 237

Query: 201 FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP--LIKKNTWHALITLKKAL 258
                     +  G W+        IP + T HP  L++      K+  W  ++ + + L
Sbjct: 238 LLG-KTVGITKLRGTWNTY----RGIPLMPTYHPAYLLRNQAMSEKRRVWEDMLAVMEKL 292


>gi|169830501|ref|YP_001716483.1| phage SPO1 DNA polymerase-like protein [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169637345|gb|ACA58851.1| phage SPO1 DNA polymerase-related protein [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 207

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 42/190 (22%), Positives = 86/190 (45%), Gaps = 5/190 (2%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
               +L +L+ ++    +C L +   + +         LM+IG  P   ++  G+PF G 
Sbjct: 15  DGPQALEDLREMMSDCRECGLHAGRTNLVFGEGHPRARLMLIGEGPGAEEDRLGRPFVGA 74

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191
            G +LD++L +  + RT+++I+ +    PPGNR  +  E + C   + +Q  LI P +++
Sbjct: 75  AGRLLDRILDAAGLARTEVYIANVVKCRPPGNRVPNREEAQACLRWLRKQFSLIGPPLVV 134

Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
            +G+       +          G+W         +  + T HP  L++ P  K++ W   
Sbjct: 135 ILGSTALKNLIDP-GASITAWRGQWIV----RGRVRFMPTYHPAALLRDPGKKRDVWRDF 189

Query: 252 ITLKKALKNL 261
             ++ A + +
Sbjct: 190 QLIRDAYREI 199


>gi|87306738|ref|ZP_01088885.1| DNA polymerase, bacteriophage-type [Blastopirellula marina DSM
           3645]
 gi|87290917|gb|EAQ82804.1| DNA polymerase, bacteriophage-type [Blastopirellula marina DSM
           3645]
          Length = 282

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 75/198 (37%), Gaps = 6/198 (3%)

Query: 60  HSPLVQQADSIAQKACSLHELKSLLRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPS 118
            +           +   L  L + +     C  L  T   T+         +   G  P 
Sbjct: 80  RAAPPVLNTDHGGRQQQLDVLAAEVAKCVLCEELACTRTQTVFGVGNPNARICFFGEAPG 139

Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPII 178
             ++  G+PF G+ G +L +++++    R  ++I       PPGNRN +  E   C P  
Sbjct: 140 ADEDKQGEPFVGRAGKLLTQIIEACTFQREDVYILNTLKCRPPGNRNPTPEENANCMPYF 199

Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238
            +Q+ +I P  ++ +G          +     +  G++ +          +AT HP  L+
Sbjct: 200 EQQLAIIQPDYIVCLGKFAAQNLLKTET-AIGKLRGQFHDY----GGAKVIATYHPAYLL 254

Query: 239 QYPLIKKNTWHALITLKK 256
           + P  K+  W  +  + +
Sbjct: 255 RNPAAKREVWEDMKMMLR 272


>gi|237748493|ref|ZP_04578973.1| DNA polymerase bacteriophage-type [Oxalobacter formigenes OXCC13]
 gi|229379855|gb|EEO29946.1| DNA polymerase bacteriophage-type [Oxalobacter formigenes OXCC13]
          Length = 304

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 48/233 (20%), Positives = 86/233 (36%), Gaps = 9/233 (3%)

Query: 37  YESQRKEKSIDSAIQPITNIRHIHSP---LVQQADSIAQKACSLHELKSLLRSFHDCHLC 93
           +      ++      PI +   +       V    +I     +   L   +     CHLC
Sbjct: 66  FPETLPVEAFADDFPPIPSEMDVSPETGVPVSSPATIPAGGDTWDGLLHEINHCERCHLC 125

Query: 94  STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHI 152
            +    +     +    + +G  P   ++  G+PF G++G++LD M+ ++ + R   ++I
Sbjct: 126 KSRNKVVPGVGDQHAGWLFVGEGPGFHEDQQGEPFVGRSGHLLDAMMAAMHMKRGENVYI 185

Query: 153 SMISPWH----PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN-DAQ 207
           + +           +R  +  E   C P + RQI+LI PKI++ +G        N     
Sbjct: 186 ANVVKCRATNEFAKDRQPTEEEAAFCMPYLERQIDLIKPKIMVALGKTAACALLNTGREV 245

Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
                  K          IP + T HP  L++ P  KK  W  L T       
Sbjct: 246 TLGSLRNKTHVFRVAGRRIPLIVTYHPSYLLRTPGGKKQAWQDLCTAMDIYDE 298


>gi|330817462|ref|YP_004361167.1| Phage SPO1 DNA polymerase-related protein [Burkholderia gladioli
           BSR3]
 gi|327369855|gb|AEA61211.1| Phage SPO1 DNA polymerase-related protein [Burkholderia gladioli
           BSR3]
          Length = 354

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 46/196 (23%), Positives = 83/196 (42%), Gaps = 6/196 (3%)

Query: 62  PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121
                A   +       EL++ +     C LC     T+        D M++G  P +++
Sbjct: 155 SAQPAAALASVADLGWDELEARVADCQRCRLCEKRTQTVFGVGDREADWMLVGEAPGENE 214

Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMR 180
           +  G+PF G+ G +LD ML ++ + R+   +I+ +    PPGNRN    E+  C P + R
Sbjct: 215 DKQGEPFVGQAGKLLDSMLHALSLERSNNVYIANVIKCRPPGNRNPEPDEVARCEPYLQR 274

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
           Q+ L+ PK+++ +G         +D        G+          +P + + HP  L++ 
Sbjct: 275 QVALVKPKLIVALGRFAAQTLLKSDGSIAS-MRGRVHQYE----GVPVIVSYHPAYLLRS 329

Query: 241 PLIKKNTWHALITLKK 256
              K   W  L   + 
Sbjct: 330 LPDKSKAWADLCLARD 345


>gi|30249369|ref|NP_841439.1| putative DNA polymerase-related protein [Nitrosomonas europaea ATCC
           19718]
 gi|30180688|emb|CAD85309.1| putative DNA polymerase-related protein, bacteriophage-type
           [Nitrosomonas europaea ATCC 19718]
          Length = 247

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 95/229 (41%), Gaps = 6/229 (2%)

Query: 34  EATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLC 93
                + +   S  +    I            +  S +        L+ ++     C L 
Sbjct: 18  RPGAIAGQSPDSGKNMSDQIETAAESRPFEESEDRSTSIAHADWGRLRQMVSGCTACPLS 77

Query: 94  STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHI 152
            T   T+     E  D + IG  P   ++  G+PF G+ G +LD MLQ++ + R   ++I
Sbjct: 78  QTRKQTVFGVGDEQADWLFIGEGPGAREDELGEPFVGQAGKLLDNMLQAVSLRRGQDVYI 137

Query: 153 SMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN 212
           + I    PPGNRN  + E E CRP ++RQI LI P++++ +G          DA      
Sbjct: 138 ANIVKCRPPGNRNPQDAEAEQCRPYLLRQIALIQPRLIVALGKVAAQNLLATDASIAS-L 196

Query: 213 LGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
            G+        S IP + T HP  L++    K   W  L   +  ++NL
Sbjct: 197 RGRLHEF----SGIPLIVTYHPAYLLRSLGDKAKAWEDLCFARDTMRNL 241


>gi|254455581|ref|ZP_05069010.1| uracil-DNA glycosylase, C-terminal domain protein [Candidatus
           Pelagibacter sp. HTCC7211]
 gi|207082583|gb|EDZ60009.1| uracil-DNA glycosylase, C-terminal domain protein [Candidatus
           Pelagibacter sp. HTCC7211]
          Length = 239

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 1/192 (0%)

Query: 70  IAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129
           +  KA  L +L+S + S  +C L   S + +         +M+IG  P   ++ SG  F 
Sbjct: 45  LGNKADLLKDLQSEINSIENCSLKDNSKNIVLGDGNINSPIMLIGEAPGIEEDKSGSTFK 104

Query: 130 GKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189
           G+ G +L+KML +I I R  I+ S    + PP +R  + +E++     +   I +I+PKI
Sbjct: 105 GEIGELLNKMLLAIGIKRQNIYCSYAINFRPPEDRKPTTLEIKRYSVFLKEHISIINPKI 164

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249
           ++ +G+         + + + +  GKW      +   P + + +P  LI++P  KK +W 
Sbjct: 165 IILMGSSAMEAVTGINTKISSE-RGKWKETILKNKTYPVMISFNPSYLIRFPENKKYSWE 223

Query: 250 ALITLKKALKNL 261
            L  +KK +  L
Sbjct: 224 DLKKIKKKIAEL 235


>gi|312602487|ref|YP_004022332.1| uracil DNA glycosylase superfamily protein [Burkholderia
           rhizoxinica HKI 454]
 gi|312169801|emb|CBW76813.1| Uracil DNA glycosylase superfamily protein [Burkholderia
           rhizoxinica HKI 454]
          Length = 384

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 53/242 (21%), Positives = 92/242 (38%), Gaps = 16/242 (6%)

Query: 26  WVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHS----------PLVQQADSIAQKAC 75
            V + PN      +                                 L   AD+      
Sbjct: 139 AVVEVPNARRALAAPVSPAETVPTGLGDARSLQAEPMGGQGEAAAPALGVAADAQPVPML 198

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
               LK+ +     C LC    +T+     E  D M++G  P ++++  G+PF G+ G +
Sbjct: 199 DWEALKARVAGCTLCRLCERRTNTVFGVGDETADWMLVGEAPGENEDKQGEPFVGQAGKL 258

Query: 136 LDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           LD ML+++++ R   ++I+ +    PPGNRN    E+  C P + RQ+ L+ P +++ +G
Sbjct: 259 LDNMLRALQMRRGDNVYIANVLKCRPPGNRNPQPDEVMRCEPYLKRQVALVKPNVIVALG 318

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
                     DA       G+          +P + T HP  L++    K   W  L   
Sbjct: 319 RFAAQSLLKTDASIAS-LRGRVHEYE----GVPVIVTYHPAYLLRSLHDKHKAWSDLCLA 373

Query: 255 KK 256
           + 
Sbjct: 374 RA 375


>gi|71082815|ref|YP_265534.1| DNA-directed DNA polymerase [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|71061928|gb|AAZ20931.1| probable DNA-directed DNA polymerase [Candidatus Pelagibacter
           ubique HTCC1062]
          Length = 243

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 61/261 (23%), Positives = 115/261 (44%), Gaps = 23/261 (8%)

Query: 2   TSKRILSQEQILTIALFYADSGVYWVFDE-PNNEATYESQRKEKSIDSAIQPITNIRHIH 60
            SK++++Q+       F   +G  ++FDE P N     S   +K +              
Sbjct: 1   MSKKVINQKTNFDS-EFLNSTGSDFIFDEKPINRLKNTSNDLKKDL-------------- 45

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120
                 +     K   L  LK  + S  DC+L + S   I         +M+IG  P   
Sbjct: 46  ------SIQKIDKVKELANLKEQINSISDCNLKNNSKKIILGDGNINSPIMLIGEAPGVE 99

Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180
           ++ +G  F G+ G++L KML +I I +  I+ +    + PP +R  ++ E++     + +
Sbjct: 100 EDNAGLTFMGEVGDLLKKMLIAINIEKQNIYTTYAVNFRPPEDRKPNSTEIKRYSQFLQK 159

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
            I +I+PKI++ +G+         ++ K     GKW  +   ++    + T +P  L++ 
Sbjct: 160 HISIINPKIIILMGSTAMESLTGLNS-KISIERGKWKEVIVKNTSYNVIITFNPSYLLRA 218

Query: 241 PLIKKNTWHALITLKKALKNL 261
           P  KK++W  L  +K+ +  L
Sbjct: 219 PENKKHSWDDLKKIKQKILEL 239


>gi|237793391|ref|YP_002860943.1| uracil-DNA glycosylase [Clostridium botulinum Ba4 str. 657]
 gi|229263750|gb|ACQ54783.1| uracil-DNA glycosylase [Clostridium botulinum Ba4 str. 657]
          Length = 190

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 41/186 (22%), Positives = 74/186 (39%), Gaps = 6/186 (3%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             +L     + + C L     + +         +M IG  P   ++ +G+PF GK G +L
Sbjct: 4   WSQLYDECINCNKCTLVKNRTNMVFGEGNISAPIMFIGEAPGADEDRTGRPFVGKAGQLL 63

Query: 137 DKMLQSIEIMRT-QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
            K L +++  R    +I  +    P  NR     E   C   +  Q+ L+ PKI++ +G 
Sbjct: 64  TKALLALDFKRDEHYYICNVCKCRPENNRTPKEEEAMTCLHYLRNQVALVKPKIMICLGA 123

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
               +    +  +  ++ GKW            + T HP  L +    KK  W  L +++
Sbjct: 124 TALKYIMG-EQFRITRDRGKWIE----RKGYYIMVTFHPAALFRDESKKKLLWQDLKSIR 178

Query: 256 KALKNL 261
           +    L
Sbjct: 179 EKYDEL 184


>gi|224826345|ref|ZP_03699447.1| phage SPO1 DNA polymerase-related protein [Lutiella nitroferrum
           2002]
 gi|224601446|gb|EEG07627.1| phage SPO1 DNA polymerase-related protein [Lutiella nitroferrum
           2002]
          Length = 284

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 6/200 (3%)

Query: 63  LVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDN 122
                 + A+   S  EL+  +     C LC T   T+          +IIG  P + ++
Sbjct: 87  AAPTLPAPAKPVLSWDELEQTVARCSHCRLCETRTQTVFGRGNPQARWLIIGEAPGEQED 146

Query: 123 ISGKPFSGKTGNMLDKMLQSIEIM-RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ 181
             GKPF G+ G +LD ML +I +     ++I+ +    PPGNRN S  E+  C+  + +Q
Sbjct: 147 KQGKPFVGRAGQLLDNMLAAIGLDSNHDVYIANVLKCRPPGNRNPSADEIVACQDYLRQQ 206

Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241
           I  I P ++L +G        +++     +  G+          +P + + HP  L++  
Sbjct: 207 IAHIRPTLILALGRFAAQTLLDSN-DSIARLRGRVHRYQ----DVPMIVSFHPAYLLRNL 261

Query: 242 LIKKNTWHALITLKKALKNL 261
             K  +W  L+  ++  + L
Sbjct: 262 PDKAKSWQDLVFARRTFRQL 281


>gi|328953988|ref|YP_004371322.1| phage SPO1 DNA polymerase-related protein [Desulfobacca acetoxidans
           DSM 11109]
 gi|328454312|gb|AEB10141.1| phage SPO1 DNA polymerase-related protein [Desulfobacca acetoxidans
           DSM 11109]
          Length = 251

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 48/217 (22%), Positives = 96/217 (44%), Gaps = 5/217 (2%)

Query: 43  EKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICA 102
           +  +   +    +I      L   ++   Q+  +L E+++ L     C L  T    +  
Sbjct: 36  KPIVAEPVVKSESIPAPELTLQPASEVPPQEVITLEEVRAELGDCQRCKLWRTRTHLVFG 95

Query: 103 TQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG 162
                  L+ IG  P ++++  G+PF G+ G +L+++L  +EI R +++I+ I+   PP 
Sbjct: 96  AGDPHARLVFIGEAPGEAEDRQGEPFVGRAGQLLNRLLSKLEISRQEVYITNINKCRPPN 155

Query: 163 NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP 222
           NR     E+  CRP + +Q++ I P++++ +G    +      A    +  G W      
Sbjct: 156 NRTPEADEIAACRPFLWKQLQAIRPQVIVTLGAVAIHALLETKAPLN-RLRGHWQQW--- 211

Query: 223 HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
              I  + T HP  L++ P  +  TW  +  +    +
Sbjct: 212 -RGIAVMPTFHPSYLLRVPQERVKTWEDMQQVLALYR 247


>gi|206890143|ref|YP_002248500.1| uracil-DNA glycosylase, family 4 [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206742081|gb|ACI21138.1| uracil-DNA glycosylase, family 4 [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 237

 Score =  179 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 42/180 (23%), Positives = 83/180 (46%)

Query: 80  LKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKM 139
           L   ++    C L ++  + +C        LM +G  P   +++ G+PF G+ G +L  +
Sbjct: 58  LNEEIKKCKKCPLSNSRKNPVCGEGNINAKLMFVGEAPGVDEDLQGRPFVGEAGKLLTSL 117

Query: 140 LQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199
           ++ +   R  ++I+     HPP NR+    E+  C   + R+IE+ISP++++ +G     
Sbjct: 118 IEKMGFKREDVYITNTVKCHPPMNRDPFESEISTCFDYLKREIEIISPQVIISLGKVATY 177

Query: 200 FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
                + +    ++ K      P++ IP + T HP  L++    K  TW       + L+
Sbjct: 178 TLMGMNGKLKDLHISKLRGKVFPYNQIPVIPTFHPAYLLRNKKDKWLTWEDAQEALRRLR 237


>gi|91762762|ref|ZP_01264727.1| probable DNA-directed DNA polymerase [Candidatus Pelagibacter
           ubique HTCC1002]
 gi|91718564|gb|EAS85214.1| probable DNA-directed DNA polymerase [Candidatus Pelagibacter
           ubique HTCC1002]
          Length = 243

 Score =  179 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 62/261 (23%), Positives = 116/261 (44%), Gaps = 23/261 (8%)

Query: 2   TSKRILSQEQILTIALFYADSGVYWVFDE-PNNEATYESQRKEKSIDSAIQPITNIRHIH 60
            SK++++Q+       F   +G  ++FDE P N     S   +K +              
Sbjct: 1   MSKKVINQKTNFDS-EFLNSTGSDFIFDEKPINRLKNTSNDLKKDL-------------- 45

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120
                 +     K   L  LK  + S  DC+L + S   I         +MIIG  P   
Sbjct: 46  ------SIQKIDKVKELENLKEQINSISDCNLKNNSKKIILGDGNINSLIMIIGEAPGIE 99

Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180
           ++ +G  F G+ G++L KML +I I +  I+ +    + PP +R  ++ E++     + +
Sbjct: 100 EDNAGLTFMGEVGDLLKKMLIAINIKKQNIYATYAVNFRPPEDRKPNSTEIKRYSQFLQK 159

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
            I +I+PKI++ +G+         ++ K     GKW  +   ++    + T +P  L++ 
Sbjct: 160 HISIINPKIIILMGSTAMESLTGLNS-KISIERGKWKEVIIKNTSYNVIITFNPSYLLRA 218

Query: 241 PLIKKNTWHALITLKKALKNL 261
           P  KK++W  L  +K+ + +L
Sbjct: 219 PENKKHSWDDLKKIKQKILDL 239


>gi|118578530|ref|YP_899780.1| phage SPO1 DNA polymerase-like protein [Pelobacter propionicus DSM
           2379]
 gi|118501240|gb|ABK97722.1| phage SPO1 DNA polymerase-related protein [Pelobacter propionicus
           DSM 2379]
          Length = 264

 Score =  179 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 49/247 (19%), Positives = 91/247 (36%), Gaps = 18/247 (7%)

Query: 7   LSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQ 66
           L    +        +SGV  +           S        +   P        SP   Q
Sbjct: 9   LVTASLRAYLQGLQESGVDGI---------PASLAGISPATAVEIPPDTPPEPDSPAATQ 59

Query: 67  ADSIAQKA----CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDN 122
           A            SL  ++S L     C L +T    +  T      L+  G  P   ++
Sbjct: 60  APQAVAPPVVERESLEIIRSDLGECQRCKLGATRTHLVFGTGNPRARLVFAGEGPGRDED 119

Query: 123 ISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQI 182
           + G+PF G+ G +L++++ ++ + R  ++I  +    PPGNR+    E+  C   ++RQ+
Sbjct: 120 LQGEPFVGEAGQVLNRIITAMGLKREDVYICNLVKCRPPGNRDPEADEIAACSTFLLRQL 179

Query: 183 ELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL 242
             I+P++++ +G            +   +  G +         IP + T HP  L++   
Sbjct: 180 RSINPEVIVALGKFAAQTLLATK-EPISRLRGTFGEF----HGIPLMPTFHPSYLLRNRG 234

Query: 243 IKKNTWH 249
                W 
Sbjct: 235 NSAPFWE 241


>gi|253999990|ref|YP_003052053.1| phage SPO1 DNA polymerase-like protein [Methylovorus sp. SIP3-4]
 gi|253986669|gb|ACT51526.1| phage SPO1 DNA polymerase-related protein [Methylovorus sp. SIP3-4]
          Length = 377

 Score =  179 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 6/202 (2%)

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120
           +  + Q    +        L+S + +   C L  T   T+        + +I+G  P   
Sbjct: 166 ATSLGQGRRDSIAQLDWQGLQSCVANCQACSLSRTRTQTVFGVGDPAAEWLIVGEAPGAE 225

Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIM 179
           ++  G+PF G+ G +LD ML +I++ R   ++I+ +    PP NR+    E++ C P + 
Sbjct: 226 EDKRGEPFVGQAGQLLDNMLGAIQLKRGQNVYIANVLKCRPPQNRDPQGEEVQQCDPFLK 285

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
           RQ+ELI PK++L +G        N+DA       G+          +P + T HP  L++
Sbjct: 286 RQVELIKPKLILALGKFAAQSLLNSDATIGS-MRGRQHEYN----GVPVIVTYHPAYLLR 340

Query: 240 YPLIKKNTWHALITLKKALKNL 261
             + K   W  L   +  ++ L
Sbjct: 341 NLMDKAKAWEDLCLARATMRKL 362


>gi|20806609|ref|NP_621780.1| Uracil-DNA glycosylase [Thermoanaerobacter tengcongensis MB4]
 gi|20515053|gb|AAM23384.1| Uracil-DNA glycosylase [Thermoanaerobacter tengcongensis MB4]
          Length = 186

 Score =  179 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 5/185 (2%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L EL         C L  T  + +         +M +G  P   +++ G+PF G+ G +L
Sbjct: 6   LKELYLACLHCTKCDLHKTKTNMVFGEGNLRAKVMFVGEGPGRDEDLQGRPFVGRAGQLL 65

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           +KML+ + + R +++I+ +    PP NR     E++ C P +  Q+ +I+PKI++ +G  
Sbjct: 66  NKMLEDVGLKREEVYIANVVKCRPPNNRVPLQSEIDACLPYLRNQVAIIAPKIIVCLGAT 125

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                 + D + T    G+W         +  +AT HP  +++ P   +        +K+
Sbjct: 126 AAKAIIDKDFKITT-MRGQWFE----RKGVKIIATYHPAAILRDPEKLQPAMEDFKKIKE 180

Query: 257 ALKNL 261
            L  L
Sbjct: 181 ELDKL 185


>gi|332796184|ref|YP_004457684.1| phage SPO1 DNA polymerase-like protein [Acidianus hospitalis W1]
 gi|332693919|gb|AEE93386.1| phage SPO1 DNA polymerase-related protein [Acidianus hospitalis W1]
          Length = 207

 Score =  179 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 44/188 (23%), Positives = 81/188 (43%), Gaps = 3/188 (1%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           SL E+   +R    C L  T  + +        ++M+IG  P  +++  G+PF G  G +
Sbjct: 2   SLEEIAKQVRECTKCKLHLTRKNAVPGEGNPSAEIMLIGEAPGANEDEEGRPFVGAAGKL 61

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           L ++L SI + R  + I+ +    PP NR+    E+  C P +  QI +I PKI++ +G 
Sbjct: 62  LTELLSSIGLNRKDVFITNLVKCRPPNNRDPEEDEIIACSPYLDEQIRIIKPKIIVTLGK 121

Query: 196 KTKNFFFNN---DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
            +  +         +      GK+      +  I    T HP   +  P ++   +    
Sbjct: 122 HSTTYILGKIGIKVKSISAVRGKFFTWNYGNVTISVFPTYHPAAALYNPSLRDELFSDFK 181

Query: 253 TLKKALKN 260
            + + L +
Sbjct: 182 KISERLNS 189


>gi|225181124|ref|ZP_03734570.1| phage SPO1 DNA polymerase-related protein [Dethiobacter
           alkaliphilus AHT 1]
 gi|225168093|gb|EEG76898.1| phage SPO1 DNA polymerase-related protein [Dethiobacter
           alkaliphilus AHT 1]
          Length = 222

 Score =  178 bits (452), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 5/200 (2%)

Query: 60  HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSD 119
               V     + ++  ++  L   +     C L S +   +        DL+ +G  P  
Sbjct: 25  KPAKVFAPLPVVEQPQTIAALSKDVLDCAQCGLRSQATQVVFGEGNPDADLLFVGEAPGA 84

Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIM 179
            ++  G+PF G+ G +L+K+L + EI R +++I+ +    PP NR  +  E   C   + 
Sbjct: 85  EEDAQGRPFVGEAGKLLNKILAAAEISREEVYITNVVKCRPPKNRTPNPDEAAACSEHLQ 144

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
           +QI L+ P+I++ +G+       +  A+      G+W         +  +AT HP  L++
Sbjct: 145 KQIALLKPRIVVCLGSLATQALIDPQARV-SAVRGRWFT----KDGLQMMATFHPAALLR 199

Query: 240 YPLIKKNTWHALITLKKALK 259
            P  K+  W  +  ++ A +
Sbjct: 200 DPSRKRPVWEDIQKIRDAYR 219


>gi|161524407|ref|YP_001579419.1| phage SPO1 DNA polymerase-like protein [Burkholderia multivorans
           ATCC 17616]
 gi|189350838|ref|YP_001946466.1| bacteriophage-type DNA polymerase [Burkholderia multivorans ATCC
           17616]
 gi|160341836|gb|ABX14922.1| phage SPO1 DNA polymerase-related protein [Burkholderia multivorans
           ATCC 17616]
 gi|189334860|dbj|BAG43930.1| bacteriophage-type DNA polymerase [Burkholderia multivorans ATCC
           17616]
          Length = 358

 Score =  178 bits (452), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 52/235 (22%), Positives = 88/235 (37%), Gaps = 6/235 (2%)

Query: 23  GVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKS 82
           G           +           D A           +    +A            L +
Sbjct: 113 GALTAIMSAPAASPSADMPPAADDDFAWFDAAPPGDSATAAEPRAAEAPVAMLDWDALAA 172

Query: 83  LLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142
            +     C LC    +T+        D M+IG  P ++++  G+PF G+ G +LD ML+S
Sbjct: 173 RVADCTRCRLCEKRTNTVFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLLDNMLRS 232

Query: 143 IEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
           + + R   ++I+ +    PPGNRN    E+  C P + RQ+ L+ PK+++ +G       
Sbjct: 233 LSLQRGENVYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVALVKPKLIVALGRFAAQTL 292

Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
              DA       G+          +P + T HP  L++    K   W  L   + 
Sbjct: 293 LKTDASIAS-LRGRVHAYE----GVPVIVTYHPAYLLRSLPDKAKAWADLCLARD 342


>gi|238026879|ref|YP_002911110.1| phage SPO1 DNA polymerase-like protein [Burkholderia glumae BGR1]
 gi|237876073|gb|ACR28406.1| Phage SPO1 DNA polymerase-related protein [Burkholderia glumae
           BGR1]
          Length = 362

 Score =  178 bits (452), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 91/237 (38%), Gaps = 8/237 (3%)

Query: 25  YWVFDEPNNEATYESQRKEKSIDSAIQ--PITNIRHIHSPLVQQADSIAQKACSLHELKS 82
                    +             S     P+++  H   P                EL++
Sbjct: 121 DTAAPAGAADQMPPDADPSLEDPSWFDLVPMSDAGHSFEPAEPAVARSPVAGLGWDELEA 180

Query: 83  LLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142
            +     C LC     T+        D M+IG  P ++++  G+PF G+ G +LD ML +
Sbjct: 181 RVAECRRCRLCEKRTRTVFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLLDSMLHA 240

Query: 143 IEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
           + + R   ++I+ +    PPGNRN    E+  C P + RQ+EL+ PK+++ +G       
Sbjct: 241 LSLKRGENVYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVELVKPKLIVAMGRFAAQTL 300

Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
             +         G+  +       +P + + HP  L++    K   W  L   +  +
Sbjct: 301 LKSTGSIAS-MRGRIHHYE----GVPVVVSYHPAYLLRSLPDKAKAWADLCLARDTI 352


>gi|327537178|gb|EGF23927.1| phage SPO1 DNA polymerase-related protein [Rhodopirellula baltica
           WH47]
          Length = 321

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 52/235 (22%), Positives = 94/235 (40%), Gaps = 13/235 (5%)

Query: 30  EPNNEAT-------YESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKS 82
           EP  +A+        E +   ++ +  +QP+ +      P    +  IA++   L  L S
Sbjct: 87  EPPPQASAGGSSIGPEVKTPPRAPEGRLQPVESFSASDDPYPGTSLPIAERENQLTNLAS 146

Query: 83  LLRSFHDCHL-CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
           ++     C L       T+             G  P   ++  G+PF GK G +LDKM+Q
Sbjct: 147 VVAGCTKCTLLAKCRTQTVFGEGNPAARFAFFGEAPGADEDRLGRPFIGKAGQLLDKMVQ 206

Query: 142 SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
           + ++ R  I++       PP NRN    E+  CR    +Q++++ P+ ++ +G  + +  
Sbjct: 207 ACKLQREDIYLLNTVKCRPPENRNPEPTELANCREYFEQQLQILRPEYIVCLGAVSAHSL 266

Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                       G+       +     L   HP  L++ P  KK  W  L  L +
Sbjct: 267 LKTKLSI-----GRLRQRFHQYHESKVLVIYHPAYLLRNPDAKKAAWADLQMLMR 316


>gi|302877854|ref|YP_003846418.1| phage SPO1 DNA polymerase-related protein [Gallionella
           capsiferriformans ES-2]
 gi|302580643|gb|ADL54654.1| phage SPO1 DNA polymerase-related protein [Gallionella
           capsiferriformans ES-2]
          Length = 324

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 88/237 (37%), Gaps = 12/237 (5%)

Query: 30  EPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQK-------ACSLHELKS 82
            P ++    +   +  +                          K            EL+ 
Sbjct: 89  SPLSQDAGNAIEVQAPVVDLFASDFQFAAPGEAADNSLREFQLKNSGGLLGTTDWPELQQ 148

Query: 83  LLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142
            ++   +C L +     +  T       + +G  P   ++   +PF G +G +LD ML +
Sbjct: 149 KVQGCTECKLRAECTQPVFGTGDPHARWLFVGEAPGAEEDELCEPFVGASGRLLDNMLLA 208

Query: 143 IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202
           I + R++++++ +    P  +R+    E+  C P + RQI L+ P +++ +G    +   
Sbjct: 209 IGLQRSEVYLANVIKCRPLDDRHPHVGEIAACLPYLKRQIGLLQPAVIVALGKTAASALL 268

Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
           + DA       G   +       IP + T HP  L++ PL K   W  L    + + 
Sbjct: 269 DTDATIAS-LRGIVHDY----KGIPLVVTYHPAYLLRSPLEKARAWQDLCLAVQTMD 320


>gi|168182317|ref|ZP_02616981.1| uracil-DNA glycosylase [Clostridium botulinum Bf]
 gi|182674592|gb|EDT86553.1| uracil-DNA glycosylase [Clostridium botulinum Bf]
          Length = 190

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 75/186 (40%), Gaps = 6/186 (3%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             +L     + + C L     + +         +M IG  P   ++ +G+PF GK G +L
Sbjct: 4   WSQLYDECINCNKCTLVKNRTNMVFGEGNISAPIMFIGEAPGADEDRTGRPFVGKAGQLL 63

Query: 137 DKMLQSIEIMRT-QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
            K L +++  R    +I  +    P  NR     E   C   +  Q+ L+ PKI++ +G 
Sbjct: 64  TKALLALDFKRDEHYYICNVCKCRPENNRTPKEEEAMTCLHYLRNQVALVKPKIMICLGA 123

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
               +    +  +  ++ GKW            +AT HP  L +    KK  W  L +++
Sbjct: 124 TALKYIMG-EQFRITRDRGKWIE----RKGYYIMATFHPAALFRDESKKKLLWQDLKSIR 178

Query: 256 KALKNL 261
           +    L
Sbjct: 179 EKYDEL 184


>gi|15639221|ref|NP_218669.1| DNA polymerase [Treponema pallidum subsp. pallidum str. Nichols]
 gi|189025462|ref|YP_001933234.1| DNA polymerase, bacteriophage-type [Treponema pallidum subsp.
           pallidum SS14]
 gi|3322496|gb|AAC65215.1| DNA polymerase, bacteriophage-type [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189018037|gb|ACD70655.1| DNA polymerase, bacteriophage-type [Treponema pallidum subsp.
           pallidum SS14]
          Length = 277

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 53/239 (22%), Positives = 90/239 (37%), Gaps = 15/239 (6%)

Query: 32  NNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKAC--------SLHELKSL 83
            +    E        DS I P        +   ++A S A            +   L+  
Sbjct: 37  LDLFRTEGIGPRPRNDSVILP-NAACSPRNHAGKRAQSTADACVRSSDGSVYTDETLREE 95

Query: 84  LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143
           + +   C L       +        D++++G  P   ++ SG+PF G++G +LD ML +I
Sbjct: 96  IFACRACELYQRRTHAVVGEGVADADVLVVGEAPGAEEDRSGRPFVGRSGKLLDAMLAAI 155

Query: 144 EIMRTQ-IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202
            + R Q  +I+ +    PP NR  +  E   C   +   + L  P  +L +G        
Sbjct: 156 GLSRQQNCYITNVVKCRPPRNRTPTPHETACCARFLHAHLTLHRPCAILVLGRCAAQHML 215

Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
                   +  G++         IP LAT HP  L++   +K+  W  L T +  L  L
Sbjct: 216 Q-TTDGIGKLRGRFFTYQ----GIPLLATYHPSALLRDEALKRPAWEDLKTFRARLLQL 269


>gi|218960625|ref|YP_001740400.1| Uracil-DNA glycosylase [Candidatus Cloacamonas acidaminovorans]
 gi|167729282|emb|CAO80193.1| Uracil-DNA glycosylase [Candidatus Cloacamonas acidaminovorans]
          Length = 217

 Score =  178 bits (451), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 63/255 (24%), Positives = 102/255 (40%), Gaps = 44/255 (17%)

Query: 7   LSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQ 66
           +S   +     F  +SG+  ++  P                                   
Sbjct: 1   MSVNALRQYLEFLKNSGIKELYYPP----------------------------------- 25

Query: 67  ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126
               + K   L EL+    +   C L ++    +          M+IG  P + ++I+G+
Sbjct: 26  ----SDKQKKLTELQKQYSTCTKCPLHNSRRKFVYGEGNPNAIAMLIGEGPGEQEDITGR 81

Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186
           PF G  G +L+KML +I + R+ ++I+ I    PPGNRN  + E + C P ++ QI++I 
Sbjct: 82  PFVGAAGQLLEKMLSAINLQRSDVYITNIVKCRPPGNRNPESEERKACLPYLLEQIQIIQ 141

Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKN 246
           PKILL +G        NN+      + GK          IP   T HP  L++    KK 
Sbjct: 142 PKILLILGLVAAQTLLNNNNTL-GWHRGKIHYFM----DIPAFVTYHPSALLRNQEWKKP 196

Query: 247 TWHALITLKKALKNL 261
            W  L   +K  + L
Sbjct: 197 AWIDLQEFQKEYEKL 211


>gi|51894053|ref|YP_076744.1| Uracil-DNA glycosylase [Symbiobacterium thermophilum IAM 14863]
 gi|51857742|dbj|BAD41900.1| Uracil-DNA glycosylase [Symbiobacterium thermophilum IAM 14863]
          Length = 206

 Score =  178 bits (451), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 47/191 (24%), Positives = 83/191 (43%), Gaps = 6/191 (3%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
            +  ++  L  +++    C L +     +         LM IG  P   ++  G+PF G+
Sbjct: 11  DRIPTMEALAEVVKGCQRCGLRAGCTQVVFGEGVWPAGLMCIGEGPGADEDRLGRPFVGR 70

Query: 132 TGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
            G +LD++L+     R    +I+ I    PPGNR     E + C P +  QI L+ PKI+
Sbjct: 71  AGQLLDRILEVSGFDRKRNCYIANIVKCRPPGNRAPEPAERQACWPYLRAQIRLVRPKII 130

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
           + +G        +  A +  +  G+W         I  + T HP  L++ P  KK+ W+ 
Sbjct: 131 VLLGATALQGIIDPSA-RITRMRGQWIERE----GIHFMPTYHPAALLRDPSKKKDVWND 185

Query: 251 LITLKKALKNL 261
           +  +    + L
Sbjct: 186 MKQVIARYREL 196


>gi|193215644|ref|YP_001996843.1| phage SPO1 DNA polymerase-like protein [Chloroherpeton thalassium
           ATCC 35110]
 gi|193089121|gb|ACF14396.1| phage SPO1 DNA polymerase-related protein [Chloroherpeton
           thalassium ATCC 35110]
          Length = 208

 Score =  178 bits (451), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 52/203 (25%), Positives = 83/203 (40%), Gaps = 5/203 (2%)

Query: 58  HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117
           +         +   QK  +L  L    +    C L       +     E   L++IG  P
Sbjct: 8   NAEQSEPLSPEEALQKYKTLSALYDATKDCKKCQLGELRTKYVFGEGNERAKLVLIGEAP 67

Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177
              ++  G+PF G++G +L K++++I   R +I+I  I    PP NR     E+  C P 
Sbjct: 68  GADEDAQGRPFVGRSGQLLTKIMEAIHFSREEIYICNILKCRPPNNREPQADEVAACLPH 127

Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237
           + RQ+E+I PKI+L +G    N     + Q      GK               T HP  L
Sbjct: 128 LYRQLEIIKPKIILALGRVAANVLL-ENKQSMSAMRGKVIKWRNSD----VFVTYHPAAL 182

Query: 238 IQYPLIKKNTWHALITLKKALKN 260
           ++ P  K+  W  +  LK+    
Sbjct: 183 LRNPNWKRLCWEDVQALKRHYDE 205


>gi|32473807|ref|NP_866801.1| DNA polymerase [Rhodopirellula baltica SH 1]
 gi|32444343|emb|CAD74341.1| DNA polymerase, bacteriophage-type [Rhodopirellula baltica SH 1]
          Length = 321

 Score =  178 bits (451), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 49/221 (22%), Positives = 89/221 (40%), Gaps = 6/221 (2%)

Query: 37  YESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHL-CST 95
            E +   ++ +  +QP+ +      P    +  IA++   L  L S++     C L    
Sbjct: 101 PEVKTPPRAPEGRLQPVESFSACDDPYPGTSLPIAERENQLTNLASVVAGCTKCTLLAKC 160

Query: 96  SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMI 155
              T+             G  P   ++  G+PF GK G +LDKM+Q+ ++ R  I++   
Sbjct: 161 RTQTVFGEGNPAARFAFFGEAPGADEDRLGRPFIGKAGQLLDKMVQACKLQREDIYLLNT 220

Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK 215
               PP NRN    E+  CR    +Q++++ P+ ++ +G  + +              G+
Sbjct: 221 VKCRPPENRNPEPTELANCREYFEQQLQILRPEYIVCLGAVSAHSLLKTKLSI-----GR 275

Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                  +     L   HP  L++ P  KK  W  L  L +
Sbjct: 276 LRQRFHQYHESKVLVIYHPAYLLRNPDAKKAAWADLQMLMR 316


>gi|270159414|ref|ZP_06188070.1| uracil-DNA glycosylase family 4 protein [Legionella longbeachae
           D-4968]
 gi|289165775|ref|YP_003455913.1| C-terminal part of DNA polymerase, bacteriophage-type [Legionella
           longbeachae NSW150]
 gi|269987753|gb|EEZ94008.1| uracil-DNA glycosylase family 4 protein [Legionella longbeachae
           D-4968]
 gi|288858948|emb|CBJ12874.1| putative C-terminal part of DNA polymerase, bacteriophage-type
           [Legionella longbeachae NSW150]
          Length = 211

 Score =  178 bits (450), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 57/186 (30%), Positives = 88/186 (47%), Gaps = 5/186 (2%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
             L  L   + S   C L  T   T+     E   LMI+G  P   ++  G PF GK G 
Sbjct: 28  KDLSSLAKEVSSCTRCPLHKTRTQTVFYRGHEKAKLMIVGEAPGFYEDQQGLPFVGKAGG 87

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           +L++ML+SIE++   ++I+ +    PP NR+    E+  C   ++RQIEL+ P ++L +G
Sbjct: 88  LLNQMLRSIEMVEKDVYIANVLKCRPPDNRDPHLDEIAQCSSFLVRQIELVKPHLILALG 147

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
                F  N       Q      +       IP + + HP  L++ P  KK T+  L+T+
Sbjct: 148 RFAGQFLLN-KPLSLKQLRNTIHHYNN----IPFIVSYHPAYLLRNPSDKKKTYIDLLTV 202

Query: 255 KKALKN 260
           KK L  
Sbjct: 203 KKLLAE 208


>gi|255020844|ref|ZP_05292900.1| putative DNA polymerase-like protein, bacteriophage type
           [Acidithiobacillus caldus ATCC 51756]
 gi|254969635|gb|EET27141.1| putative DNA polymerase-like protein, bacteriophage type
           [Acidithiobacillus caldus ATCC 51756]
          Length = 297

 Score =  178 bits (450), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 51/221 (23%), Positives = 87/221 (39%), Gaps = 7/221 (3%)

Query: 35  ATYESQRKEKSIDSAIQPITNIRHIHSPL-VQQADSIAQKACSLHELKSLLRSFHDCHLC 93
                     + +   +P+        P    Q    A  A     LK  + +   C L 
Sbjct: 74  TAALVIDPASAEEQEHEPLAVEPMEVMPADRDQVRRQAISAMDWQALKERIETCRACSLG 133

Query: 94  STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHI 152
           ST  + +    +       +G  P   ++  G+ F G+ G +LD ML ++ + R  +++I
Sbjct: 134 STRQNAVVGAGSPEGSWCFVGEAPGAEEDRRGEAFVGRGGQLLDAMLAAMSLSRAREVYI 193

Query: 153 SMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN 212
           + +    PP NR+    E+  C P + RQI L+ P+IL+ +G           +    Q 
Sbjct: 194 ANVLKCRPPNNRDPLGPEVRSCLPYLERQIALVQPRILVALGRFAAQSLLQ-TSTPIGQL 252

Query: 213 LGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253
            G+          IP + T HP  L++ PL K+  W  L  
Sbjct: 253 RGRVWEY----RGIPLVVTYHPAYLLRNPLEKRKVWEDLKL 289


>gi|269792546|ref|YP_003317450.1| phage SPO1 DNA polymerase-like protein [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269100181|gb|ACZ19168.1| phage SPO1 DNA polymerase-related protein [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 196

 Score =  178 bits (450), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 46/198 (23%), Positives = 89/198 (44%), Gaps = 10/198 (5%)

Query: 69  SIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128
           S+  ++  L ++++   S   C LCS+  + +         LM +G  P   ++  G PF
Sbjct: 2   SLEDRSLMLEQIRNRALSCERCGLCSSRTNVVFGEGVLEGGLMFVGEGPGADEDQQGVPF 61

Query: 129 SGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188
            G+ G +L ++L +  I R Q++I+ +    PPGNR  +  EM  C   +  QI L+ P+
Sbjct: 62  VGRAGQLLTQILSAAGISRDQVYITNVVKCRPPGNRVPTYEEMMACDQFLQAQILLVRPR 121

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI----- 243
           +L+ +G+    +      +   +  G+W         +  +   HP  L++ P       
Sbjct: 122 LLVLLGSTPTKWILK-TQEAISKLRGQWFQW----RGMEVMPMFHPSYLLRNPSNKVGSP 176

Query: 244 KKNTWHALITLKKALKNL 261
           K  TW  +  +K+   ++
Sbjct: 177 KHLTWEDIQEVKRRWDSV 194


>gi|254563580|ref|YP_003070675.1| phage DNA polymerase [Methylobacterium extorquens DM4]
 gi|254270858|emb|CAX26863.1| putative phage DNA polymerase [Methylobacterium extorquens DM4]
          Length = 344

 Score =  178 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 69/230 (30%), Positives = 105/230 (45%), Gaps = 2/230 (0%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P         R   + +                   A + A +  +L EL+ LLR F  C
Sbjct: 110 PLEFRRELPSRDAPAREPPRTYGNAAGAKPGEAADDARARAAQMKTLEELEELLRGFEGC 169

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150
            L  T+ + + A       +M +G  P   ++  GKPF G++G +LD+M+ +I + RT  
Sbjct: 170 GLRFTAKNLVFADGNPQARVMFVGEAPGADEDRIGKPFMGRSGQLLDRMMAAIGLDRTSA 229

Query: 151 HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210
           +IS + PW PPGNRN +  E+ ICRP + RQIEL +P IL+ +G                
Sbjct: 230 YISNVVPWRPPGNRNPTPQEISICRPFVERQIELANPDILVCLGAPATQTLTGTK-DGIL 288

Query: 211 QNLGKWSNLCTP-HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
           +  G++          I  LAT+HP  L++ P+ K+  W     LK AL 
Sbjct: 289 KARGRFYPYRLGDGREIRALATLHPAYLLRQPVQKRLAWRDFRMLKSALD 338



 Score = 40.9 bits (94), Expect = 0.21,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 1  MTSKRILSQE--QILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPIT 54
          MT+    +     +++   F+  +GV  V DE  ++   E++       S  +P T
Sbjct: 4  MTANHADTDARGDLISYLDFHVAAGVDAVLDEQPHDRFAEAESVRADAASQAEPAT 59


>gi|307729307|ref|YP_003906531.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp.
           CCGE1003]
 gi|307583842|gb|ADN57240.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp.
           CCGE1003]
          Length = 342

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 56/245 (22%), Positives = 93/245 (37%), Gaps = 19/245 (7%)

Query: 26  WVFDEPNNEATYESQRKEKSIDSAIQPITNIR----------HIHSPLVQQADSIAQKA- 74
                    A+ + Q  +    +   P                +H P    A   A  A 
Sbjct: 89  EPQRATPGTASGDPQPAQARPSADPFPFDAPPDDGFAWFDDLPLHPPGESDAAVPALPAI 148

Query: 75  --CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
                  L   + +   C LC     T+        D M+IG  P ++++  G+PF G+ 
Sbjct: 149 NTLDWDALSERVATCERCRLCEKRTKTVFGVGDREADWMLIGEAPGENEDRVGEPFVGQA 208

Query: 133 GNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191
           G +LD ML+S+ + R   ++I+ +    PPGNRN    E+  C P + RQ+ L+ PK+++
Sbjct: 209 GKLLDNMLRSLTLARGANVYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVALVKPKLIV 268

Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
            +G          DA       G+          +P + T HP  L++    K   W  L
Sbjct: 269 ALGRFAAQSLLKTDA-SISSLRGRVHEYE----GVPVVVTYHPAYLLRSLPDKAKAWADL 323

Query: 252 ITLKK 256
              + 
Sbjct: 324 CLARD 328


>gi|148378081|ref|YP_001252622.1| uracil-DNA glycosylase [Clostridium botulinum A str. ATCC 3502]
 gi|153933715|ref|YP_001382480.1| uracil-DNA glycosylase [Clostridium botulinum A str. ATCC 19397]
 gi|153935117|ref|YP_001386032.1| uracil-DNA glycosylase [Clostridium botulinum A str. Hall]
 gi|148287565|emb|CAL81629.1| putative uracil-DNA glycosylase [Clostridium botulinum A str. ATCC
           3502]
 gi|152929759|gb|ABS35259.1| uracil-DNA glycosylase [Clostridium botulinum A str. ATCC 19397]
 gi|152931031|gb|ABS36530.1| uracil-DNA glycosylase [Clostridium botulinum A str. Hall]
          Length = 190

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 6/186 (3%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             +L     + + C L     + +         +M IG  P   ++ +G+PF GK G +L
Sbjct: 4   WSQLYDECINCNKCTLVKNRTNMVFGEGNISAPIMFIGEAPGADEDRTGRPFVGKAGQLL 63

Query: 137 DKMLQSIEIMRT-QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
            K L +++  R    +I  +    P  NR     E   C P +  Q+ L+ PKI++ +G 
Sbjct: 64  TKALLALDFKRDEHYYICNVCKCRPENNRTPKEEEAMTCLPYLRNQVALVKPKIMICLGA 123

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
               +    +  +  ++ GKW            +AT HP  L +    KK  W  L +++
Sbjct: 124 TALKYIMG-EQFRITRDRGKWIE----RKGYYIMATFHPAALFRDESKKKLLWQDLKSIR 178

Query: 256 KALKNL 261
           +    L
Sbjct: 179 EKYDEL 184


>gi|22299499|ref|NP_682746.1| hypothetical protein tll1956 [Thermosynechococcus elongatus BP-1]
 gi|22295682|dbj|BAC09508.1| tll1956 [Thermosynechococcus elongatus BP-1]
          Length = 235

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 59/238 (24%), Positives = 100/238 (42%), Gaps = 13/238 (5%)

Query: 30  EPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHD 89
           EP   + ++S  + +   +   P+    +   PL  +    A    +L  L    +    
Sbjct: 3   EPLQFSLFDSPTEAEPAPAT--PLDPATYDQIPLRAEVPIPAGTYRNLEALAVHCQQCQR 60

Query: 90  CHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM-RT 148
           C L +T    + +       LMIIG  P  +++ SG+PF GK G +LDK+L S+ +    
Sbjct: 61  CGLAATRTHVVVSRGNPAAKLMIIGEGPGQAEDESGRPFVGKAGQLLDKILASVNLDSER 120

Query: 149 QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQK 208
             +I  I    PPGNR  + IE   C P ++ QI L++P+I+L  G    +     D + 
Sbjct: 121 DAYICNIVKCRPPGNRVPTPIEAAACIPYLLEQIRLVNPRIILLAGATAVSGLLK-DHRG 179

Query: 209 TYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWHALITLKKALKNL 261
             +  G+W            +   HP  L++         K  TW  +  ++  L+ L
Sbjct: 180 ITKIRGQWIEWQGRW----CMPIFHPAYLLRNNSREPGSPKWLTWQDIQAVRDRLRQL 233


>gi|194337589|ref|YP_002019383.1| phage SPO1 DNA polymerase-related protein [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194310066|gb|ACF44766.1| phage SPO1 DNA polymerase-related protein [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 203

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 5/200 (2%)

Query: 62  PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121
           P V   +  A  +  L  L    R    C L  T L+ +         L +IG  P   +
Sbjct: 2   PPVSCVEEPASSSQELALLFETARKCRKCQLAETRLNFVFGEGDPAAKLAVIGEAPGAEE 61

Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ 181
           + SG+PF G++G +LDK+LQ+    R +++I  I    PPGNRN    E+E C P ++ Q
Sbjct: 62  DASGRPFVGRSGQLLDKILQAAGFNRPEVYICNILKCRPPGNRNPLPDEIENCIPWLLEQ 121

Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241
           +++++PK++L +G    N  F N        LG                T HP  L++ P
Sbjct: 122 LQIVNPKVILILGKVAANTIFENKLS-----LGSMRGKAIKWKGYDCFITYHPAALLRNP 176

Query: 242 LIKKNTWHALITLKKALKNL 261
             K+  W  +  + +    +
Sbjct: 177 EWKRGCWDDIQLMMRHYATI 196


>gi|153940469|ref|YP_001389438.1| uracil-DNA glycosylase [Clostridium botulinum F str. Langeland]
 gi|168177407|ref|ZP_02612071.1| uracil-DNA glycosylase [Clostridium botulinum NCTC 2916]
 gi|170756172|ref|YP_001779700.1| uracil-DNA glycosylase [Clostridium botulinum B1 str. Okra]
 gi|226947298|ref|YP_002802389.1| uracil-DNA glycosylase [Clostridium botulinum A2 str. Kyoto]
 gi|152936365|gb|ABS41863.1| uracil-DNA glycosylase [Clostridium botulinum F str. Langeland]
 gi|169121384|gb|ACA45220.1| uracil-DNA glycosylase [Clostridium botulinum B1 str. Okra]
 gi|182671008|gb|EDT82982.1| uracil-DNA glycosylase [Clostridium botulinum NCTC 2916]
 gi|226842858|gb|ACO85524.1| uracil-DNA glycosylase [Clostridium botulinum A2 str. Kyoto]
 gi|322804346|emb|CBZ01896.1| uracil-DNA glycosylase, family 4 [Clostridium botulinum H04402 065]
          Length = 190

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 6/186 (3%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             +L     + + C L     + +         +M IG  P   ++ +G+PF GK G +L
Sbjct: 4   WSQLYDECINCNKCTLVKNRTNMVFGEGNISAPIMFIGEAPGADEDRTGRPFVGKAGQLL 63

Query: 137 DKMLQSIEIMRT-QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
            K L +++  R    +I  +    P  NR     E   C P +  Q+ L+ PKI++ +G 
Sbjct: 64  TKALLALDFKRDEHYYICNVCKCRPENNRTPKEEEAMTCLPYLRNQVALVKPKIMICLGA 123

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
               +    +  +  ++ GKW            +AT HP  L +    KK  W  L +++
Sbjct: 124 TALKYIMG-EQFRITRDRGKWIE----RKGYYIMATFHPAALFRDESKKKLLWQDLKSIR 178

Query: 256 KALKNL 261
           +    L
Sbjct: 179 EKYDEL 184


>gi|291059633|gb|ADD72368.1| DNA polymerase, bacteriophage-type [Treponema pallidum subsp.
           pallidum str. Chicago]
          Length = 270

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 53/239 (22%), Positives = 90/239 (37%), Gaps = 15/239 (6%)

Query: 32  NNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKAC--------SLHELKSL 83
            +    E        DS I P        +   ++A S A            +   L+  
Sbjct: 30  LDLFRTEGIGPRPRNDSVILP-NAACSPRNHAGKRAQSTADACVRSSDGSVYTDETLREE 88

Query: 84  LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143
           + +   C L       +        D++++G  P   ++ SG+PF G++G +LD ML +I
Sbjct: 89  IFACRACELYQRRTHAVVGEGVADADVLVVGEAPGAEEDRSGRPFVGRSGKLLDAMLAAI 148

Query: 144 EIMRTQ-IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202
            + R Q  +I+ +    PP NR  +  E   C   +   + L  P  +L +G        
Sbjct: 149 GLSRQQNCYITNVVKCRPPRNRTPTPHETACCARFLHAHLTLHRPCAILVLGRCAAQHML 208

Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
                   +  G++         IP LAT HP  L++   +K+  W  L T +  L  L
Sbjct: 209 Q-TTDGIGKLRGRFFTYQ----GIPLLATYHPSALLRDEALKRPAWEDLKTFRARLLQL 262


>gi|170760011|ref|YP_001785403.1| uracil-DNA glycosylase [Clostridium botulinum A3 str. Loch Maree]
 gi|169407000|gb|ACA55411.1| uracil-DNA glycosylase [Clostridium botulinum A3 str. Loch Maree]
          Length = 190

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 6/186 (3%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             +L     + + C L     + +         +M IG  P   ++ +G+PF GK G +L
Sbjct: 4   WSQLYDECINCNKCTLVKNRTNMVFGEGNISAPIMFIGEAPGADEDRTGRPFVGKAGQLL 63

Query: 137 DKMLQSIEIMRT-QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
            K L +++  R    +I  +    P  NR     E   C P +  Q+ LI PKI++ +G 
Sbjct: 64  TKALLALDFKRDEHYYICNVCKCRPENNRTPKEEEAMTCLPYLRNQVALIKPKIMICLGA 123

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
               +    +  +  ++ GKW            +AT HP  L +    KK  W  L +++
Sbjct: 124 TALKYIMG-EQFRITRDRGKWIE----RKGYYIMATFHPAALFRDESKKKLLWQDLKSIR 178

Query: 256 KALKNL 261
           +    L
Sbjct: 179 EKYDEL 184


>gi|222148035|ref|YP_002548992.1| DNA polymerase [Agrobacterium vitis S4]
 gi|221735023|gb|ACM35986.1| DNA polymerase [Agrobacterium vitis S4]
          Length = 302

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 75/221 (33%), Positives = 107/221 (48%), Gaps = 1/221 (0%)

Query: 39  SQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLS 98
                          T +       +  A   A+ A SL ELK+ L  F  C+L +++ S
Sbjct: 83  PALNRDRPAPRPAASTPLAIPDETAINDARFAAESARSLAELKAALEGFSSCNLKTSARS 142

Query: 99  TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158
           TI A       +M+IG  PS  D+  G  FSG+TG +LD+ML +I + R  + ++   PW
Sbjct: 143 TIFAEGPAEAGIMVIGPIPSADDDREGLAFSGRTGALLDRMLAAIGLRRDALLLTTAIPW 202

Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218
             PG+R  +  E  ICRP I RQI L  PK +L +GN T  FFF   A       G+W +
Sbjct: 203 RGPGDRMPTPAEAAICRPFIERQIALAEPKAVLLLGNFTARFFFGGTATIHS-MRGEWRD 261

Query: 219 LCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
           +      +  +AT HPQEL+Q P  K   W  L+  ++ L 
Sbjct: 262 VAAGGHGVAAMATFHPQELLQAPATKALAWRDLLAFRQRLA 302


>gi|254436695|ref|ZP_05050189.1| uracil-DNA glycosylase, family 4, putative [Octadecabacter
           antarcticus 307]
 gi|198252141|gb|EDY76455.1| uracil-DNA glycosylase, family 4, putative [Octadecabacter
           antarcticus 307]
          Length = 264

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 63/260 (24%), Positives = 120/260 (46%), Gaps = 12/260 (4%)

Query: 12  ILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSI 70
              +  +  + GV     D+P +    +  +       A   + +     +    + + I
Sbjct: 6   AKALLDWQVEMGVDEAIGDDPVDRYALQDVKPAPKAAQAPSTLPSAPPAVATAAPEINQI 65

Query: 71  AQKA------CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNIS 124
           +           L  L++ + +F  C L + + + + +  T G  +MII   P   D+ +
Sbjct: 66  SAANNAANAAQDLAGLRAAMGAFEGCALKAAARNLVFSGGTAGAPVMIIADAPDRDDDRA 125

Query: 125 GKPFSGKTGNMLDKMLQSIEIMRT---QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ 181
           G+ F+G+TG +LDKML +I + R+    I+ + + PW+PP NR+ +  EM +  P + R 
Sbjct: 126 GELFAGRTGALLDKMLAAIGLGRSGDAPIYAAPVLPWNPPQNRDPNADEMAMMLPFLQRH 185

Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241
           I L +PK+L+ +GN       N       +  G W+++    + +P +    P  L+  P
Sbjct: 186 ITLAAPKVLILMGNGPCQALLNKSG--MTRLHGGWTDVQIGSASLPAIPMFAPSYLLTKP 243

Query: 242 LIKKNTWHALITLKKALKNL 261
             K++ W  L++LK  LK+L
Sbjct: 244 SAKRDAWSDLLSLKAHLKDL 263


>gi|91774769|ref|YP_544525.1| phage SPO1 DNA polymerase-related protein [Methylobacillus
           flagellatus KT]
 gi|91708756|gb|ABE48684.1| phage SPO1 DNA polymerase-related protein [Methylobacillus
           flagellatus KT]
          Length = 330

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 52/247 (21%), Positives = 90/247 (36%), Gaps = 16/247 (6%)

Query: 26  WVFDEPNNEATYESQRKEKSIDSAIQPIT----------NIRHIHSPLVQQADSIAQKAC 75
            V  EP  EA        +      + +                     Q     A  A 
Sbjct: 79  AVQAEPACEADSHEAGAIQPDPEYFEAMQTWPEFGESVVPPLIEEVSAPQGDRRTAIMAM 138

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
               L+  +     C L      T+        + + +G  P   ++  G+PF G  G +
Sbjct: 139 DWQALQQSVSECEACDLAQKRTQTVFGIGDPNAEWLFVGEAPGAEEDRWGEPFVGPAGQL 198

Query: 136 LDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           LD ML +I + R   ++I+ +    PP NR+    E+  C P + RQ+ELI PK+++ +G
Sbjct: 199 LDNMLAAIALKRGENVYIANVLKCRPPANRDPQGEEVVKCDPYLKRQVELIKPKLIVALG 258

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
                    +D        G   +       +P + T HP  L++    K   W  L   
Sbjct: 259 KFAAQSLLASDKSIAG-LRGALHDF----HGVPVIVTYHPAYLLRNLADKAKAWDDLCFA 313

Query: 255 KKALKNL 261
           ++ +++L
Sbjct: 314 RETMQHL 320


>gi|78187754|ref|YP_375797.1| Phage SPO1 DNA polymerase-related protein [Chlorobium luteolum DSM
           273]
 gi|78167656|gb|ABB24754.1| Phage SPO1 DNA polymerase-related protein [Chlorobium luteolum DSM
           273]
          Length = 199

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 5/190 (2%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
             A +L  L+        C L  T  + +         L++IG  P   ++ +GKPF G+
Sbjct: 5   PTAEALGALRLETLECRKCRLAETRNTVVFGEGDPESKLVVIGEGPGAEEDATGKPFVGR 64

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191
           +G +L K+L +I   R ++ I  I    PP NRN ++ E+  C P +  QIE+I PK++L
Sbjct: 65  SGQLLTKILAAIGFSREEVFICNIVKCRPPQNRNPAHDEIAACTPWLKSQIEIIRPKVIL 124

Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
            +G    N     ++       GK          +    T HP  L++ P  K+  W  +
Sbjct: 125 LLGKVAANTILQ-NSLSMGAMRGKVLQWE----GVDCFVTYHPAALLRNPNWKRGCWEDV 179

Query: 252 ITLKKALKNL 261
             L+    N+
Sbjct: 180 QLLRHHYDNI 189


>gi|282901222|ref|ZP_06309151.1| Phage SPO1 DNA polymerase-related protein [Cylindrospermopsis
           raciborskii CS-505]
 gi|281193922|gb|EFA68890.1| Phage SPO1 DNA polymerase-related protein [Cylindrospermopsis
           raciborskii CS-505]
          Length = 223

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 48/192 (25%), Positives = 79/192 (41%), Gaps = 11/192 (5%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           +++EL     + H C L       +         +MIIG  P   ++ +G PF GK+G +
Sbjct: 34  NVNELALQCENCHRCGLGKNRTHAVVGRGNPQAKIMIIGEAPGQHEDETGLPFVGKSGQL 93

Query: 136 LDKMLQSIE-IMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           LDK+L S+       ++I  I    PP NR  ++ E+  CRP ++ QI LI PKI+L  G
Sbjct: 94  LDKILASVNLTTEQDVYICNIVKCRPPENRVPTSEEINACRPYLLEQIRLIDPKIILLTG 153

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWH 249
                    +      +  G+W            +   HP  L++ P       K   W 
Sbjct: 154 ATAVKGVTGSKL-PITKIRGQWLEWE----GRLCMPIFHPSYLLRNPSKEQGSPKWLMWQ 208

Query: 250 ALITLKKALKNL 261
            +  ++     +
Sbjct: 209 DIQQIRNRYDQI 220


>gi|226939479|ref|YP_002794552.1| DNA-directed DNA polymerase, bacteriophage-type [Laribacter
           hongkongensis HLHK9]
 gi|226714405|gb|ACO73543.1| Probable DNA-directed DNA polymerase, bacteriophage-type
           [Laribacter hongkongensis HLHK9]
          Length = 259

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 79/231 (34%), Gaps = 10/231 (4%)

Query: 26  WVFDEP----NNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELK 81
           W   +P       A+      +  +            +                    L 
Sbjct: 16  WCLRQPESGLPARASEVMTLPQPEVLPPATGTEPAPAVVLAPPTAVMEQVTATDDWDNLS 75

Query: 82  SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
             +     C LC T   T+         LM+IG  P + +++ G+PF G  G +LD ML 
Sbjct: 76  RQVSGCRSCRLCETRTRTVLERGNRQAPLMLIGEGPGEQEDLQGRPFVGPAGKLLDAMLT 135

Query: 142 SIEI-MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF 200
           +        +++  +    PPGNRN    EM  C+  +  QI L+ P++++ +G      
Sbjct: 136 ATGWSPEQDMYVCNVVKCRPPGNRNPQPDEMAACQAYLQTQIRLVRPRLIVALGRVAAQS 195

Query: 201 FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
               +     +  G+           P + T HP  L++    K   W  L
Sbjct: 196 LLATELSV-ARLRGQTHQYA----GYPLVVTYHPAYLLRNLPDKARAWQDL 241


>gi|307266580|ref|ZP_07548111.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacter
           wiegelii Rt8.B1]
 gi|326391764|ref|ZP_08213285.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacter
           ethanolicus JW 200]
 gi|306918377|gb|EFN48620.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacter
           wiegelii Rt8.B1]
 gi|325992202|gb|EGD50673.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 186

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 44/185 (23%), Positives = 84/185 (45%), Gaps = 5/185 (2%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L EL         C L  T  + +         +M +G  P   +++ G+PF G+ G +L
Sbjct: 6   LKELYLECLHCTKCDLSKTKTNMVFGEGNLRAKVMFVGEGPGRDEDLQGRPFVGRAGQLL 65

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           +KML+ + + R +++I+ +    PP NR     E++ C P +  Q+ +I+PKI++ +G  
Sbjct: 66  NKMLEEVGLKREEVYIANVVKCRPPNNRVPLQSEIDACLPYLRNQVAIIAPKIIVCLGAT 125

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                 + + + T    G+W         +  +AT HP  +++ P   +        +K+
Sbjct: 126 AAKAIIDKNFKITT-MRGQWFE----RKGVKIIATYHPAAILRDPEKLEPAMEDFKKIKE 180

Query: 257 ALKNL 261
            L  L
Sbjct: 181 ELNKL 185


>gi|237746081|ref|ZP_04576561.1| DNA polymerase bacteriophage-type [Oxalobacter formigenes HOxBLS]
 gi|229377432|gb|EEO27523.1| DNA polymerase bacteriophage-type [Oxalobacter formigenes HOxBLS]
          Length = 317

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 52/225 (23%), Positives = 83/225 (36%), Gaps = 7/225 (3%)

Query: 42  KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTIC 101
                     P  ++    +     A   A    S  +L   +     CHLC T    + 
Sbjct: 88  PPPPASGTGFPAFDVADAATASALSA-ETAAGPDSWEKLLGEIGHCERCHLCKTRNKVVP 146

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHP 160
                  D + IG  P   ++  G+PF G++G +LD M+ ++ + R   ++I+ I     
Sbjct: 147 GIGDREADWLFIGEGPGFHEDRQGEPFVGRSGKLLDAMMAAMRMKRGENVYIANIVKCRA 206

Query: 161 PG----NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN-DAQKTYQNLGK 215
                 +R  +  E  IC P + RQI+LI PKI++ +G        N            +
Sbjct: 207 SNESGKDRQPTEEEAAICMPYLERQIDLIRPKIMVALGKTAAVALLNTGRDVSLGSLRNR 266

Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
                T    IP + T HP  L++ P  KK  W  L         
Sbjct: 267 EHFFRTGGRKIPLVVTYHPSYLLRTPGGKKQAWQDLCRALDIYDE 311


>gi|296158932|ref|ZP_06841760.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp. Ch1-1]
 gi|295890807|gb|EFG70597.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp. Ch1-1]
          Length = 391

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 57/251 (22%), Positives = 91/251 (36%), Gaps = 24/251 (9%)

Query: 25  YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSP------------------LVQQ 66
                EP    T    R+ K      +          P                      
Sbjct: 132 DAAQAEPGRAQTPAETRQPKQPQQPSRTPEPPAFDAPPEDDFAWFDDLPTHAPADAPDAA 191

Query: 67  ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126
             + A        L   + +   C LC    ST+      G D M+IG  P ++++  G+
Sbjct: 192 PPAPAIHTLDWDALSERVAACRLCRLCEKRRSTVFGVGDRGADWMLIGEAPGENEDRLGE 251

Query: 127 PFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELI 185
           PF G+ G +LD ML+S+ + R    +I+ +    PPGNRN    E+  C P + RQ+ L+
Sbjct: 252 PFVGQAGKLLDNMLRSLTLARDTNVYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVALV 311

Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK 245
            PK+++ +G          DA       G+          +P + T HP  L++    K 
Sbjct: 312 KPKLIVALGRFAAQSLLKTDA-SISSLRGRVHEYE----GVPVIVTYHPAYLLRSLPDKA 366

Query: 246 NTWHALITLKK 256
             W  L   + 
Sbjct: 367 KAWADLCLARD 377


>gi|91784145|ref|YP_559351.1| Phage SPO1 DNA polymerase-related protein [Burkholderia xenovorans
           LB400]
 gi|91688099|gb|ABE31299.1| Phage SPO1 DNA polymerase-related protein [Burkholderia xenovorans
           LB400]
          Length = 401

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 52/243 (21%), Positives = 91/243 (37%), Gaps = 25/243 (10%)

Query: 34  EATYESQRKEKSIDSAIQPITNIRHIHSPLVQQ-------------------ADSIAQKA 74
            A   ++ ++                 +P                         + A   
Sbjct: 147 RAQTPAETRQPKQPQQPSRTPEPPAFDAPPEDDFAWFDDLPTHAPADAADAAPPATAIHT 206

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
                L   + +   C LC    +T+      G D M+IG  P ++++  G+PF G+ G 
Sbjct: 207 LDWDALSERVAACRLCRLCEKRTNTVFGVGDRGADWMLIGEAPGENEDRLGEPFVGQAGK 266

Query: 135 MLDKMLQSIEIMRT-QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
           +LD ML+S+ + R   ++I+ +    PPGNRN    E+  C P + RQ+ L+ PK+++ +
Sbjct: 267 LLDNMLRSLTLARDANVYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVALVKPKLIVAL 326

Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253
           G          DA       G+          +P + T HP  L++    K   W  L  
Sbjct: 327 GRFAAQSLLKTDA-SISSLRGRVHEYE----GVPVIVTYHPAYLLRSLPDKAKAWADLCL 381

Query: 254 LKK 256
            + 
Sbjct: 382 ARD 384


>gi|217076510|ref|YP_002334226.1| uracil-DNA glycosylase [Thermosipho africanus TCF52B]
 gi|217036363|gb|ACJ74885.1| uracil-DNA glycosylase [Thermosipho africanus TCF52B]
          Length = 199

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 43/184 (23%), Positives = 79/184 (42%), Gaps = 9/184 (4%)

Query: 82  SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
             +++   C L     + +         +M +G  P + +++SG+PF G+ G +L K+L+
Sbjct: 12  ERIKNCKACPLHENRTNVVPGEGNLDSPIMFVGEGPGEDEDLSGRPFVGRAGQLLTKILE 71

Query: 142 SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
           S+ I R  ++I+ I    PP NR  +  E  IC   +  QIE+I+P++++ +G      F
Sbjct: 72  SVNIKREDVYITNIVKCRPPNNRTPTKEEASICSHYLFAQIEVINPRMIVTLGKPALELF 131

Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWHALITLKK 256
               +    +  G           I      HP  L++ P       K  TW  +  ++K
Sbjct: 132 LG-KSVAITKVRGNEFEWK---GGIIIFPMFHPSYLLRNPSKAKGSPKDLTWQDIKRVRK 187

Query: 257 ALKN 260
               
Sbjct: 188 YYDQ 191


>gi|221198347|ref|ZP_03571393.1| uracil-DNA glycosylase, family 4 [Burkholderia multivorans CGD2M]
 gi|221208286|ref|ZP_03581290.1| uracil-DNA glycosylase, family 4 [Burkholderia multivorans CGD2]
 gi|221171934|gb|EEE04377.1| uracil-DNA glycosylase, family 4 [Burkholderia multivorans CGD2]
 gi|221182279|gb|EEE14680.1| uracil-DNA glycosylase, family 4 [Burkholderia multivorans CGD2M]
          Length = 358

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 49/205 (23%), Positives = 84/205 (40%), Gaps = 6/205 (2%)

Query: 53  ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMI 112
                   +    +A            L + +     C LC    +T+        D M+
Sbjct: 143 AAPPGDSATAAEPRAAEAPVAMLDWDALAARVADCTRCRLCEKRTNTVFGVGDREADWML 202

Query: 113 IGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEM 171
           IG  P ++++  G+PF G+ G +LD ML+S+ + R   ++I+ +    PPGNRN    E+
Sbjct: 203 IGEAPGENEDKQGEPFVGQAGKLLDNMLRSLSLQRGENVYIANVIKCRPPGNRNPEPDEV 262

Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231
             C P + RQ+ L+ PK+++ +G          DA       G+          +P + T
Sbjct: 263 ARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDASIAS-LRGRVHAYE----GVPVIVT 317

Query: 232 VHPQELIQYPLIKKNTWHALITLKK 256
            HP  L++    K   W  L   + 
Sbjct: 318 YHPAYLLRSLPDKAKAWADLCLARD 342


>gi|167038549|ref|YP_001666127.1| phage SPO1 DNA polymerase-like protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|256752669|ref|ZP_05493520.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|320116945|ref|YP_004187104.1| phage SPO1 DNA polymerase-like protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166857383|gb|ABY95791.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|256748431|gb|EEU61484.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|319930036|gb|ADV80721.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacter
           brockii subsp. finnii Ako-1]
          Length = 186

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 5/185 (2%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L EL         C L  T  + +         +M +G  P   +++ G+PF G+ G  L
Sbjct: 6   LKELYLECLHCTKCDLSKTKTNMVFGEGNLRAKVMFVGEGPGRDEDLQGRPFVGRAGQFL 65

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           +KML+ + + R +++I+ I    PP NR     E++ C P +  Q+ +I+PK+++ +G  
Sbjct: 66  NKMLEDVGLKREEVYIANIVKCRPPNNRVPLQSEIDACLPYLRNQVAIIAPKMIVCLGAT 125

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                 +    K     G+W         +  +AT HP  +++ P   +        +K+
Sbjct: 126 AAKAIID-KNFKITVMRGQWFE----RKGVKIIATYHPAAILRDPEKLEPAMEDFKKIKE 180

Query: 257 ALKNL 261
            L  L
Sbjct: 181 ELDKL 185


>gi|313201963|ref|YP_004040621.1| phage spo1 DNA polymerase-like protein [Methylovorus sp. MP688]
 gi|312441279|gb|ADQ85385.1| phage SPO1 DNA polymerase-related protein [Methylovorus sp. MP688]
          Length = 377

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 6/202 (2%)

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120
           +  + Q    +        L+S + +   C L  T   T+        + +I+G  P   
Sbjct: 166 ATSLGQGRRDSIAQLDWQGLQSCVANCQACSLSRTRTQTVFGVGDPAAEWLIVGEAPGAE 225

Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIM 179
           ++  G+PF G+ G +LD ML +I++ R   ++I+ +    PP NR+    E++ C P + 
Sbjct: 226 EDKRGEPFVGQAGQLLDNMLGAIQLKRGQNVYIANVLKCRPPQNRDPQGEEVQQCDPFLK 285

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
           RQ+ELI PK++L +G        N+DA       G+          +P + T HP  L++
Sbjct: 286 RQVELIKPKLILALGKFAAQSLLNSDATIGS-MRGRQHEYN----GVPVIVTYHPAYLLR 340

Query: 240 YPLIKKNTWHALITLKKALKNL 261
             + K   W  L   +  ++ L
Sbjct: 341 NLMDKAKAWEDLCLARATMRKL 362


>gi|254415738|ref|ZP_05029496.1| uracil-DNA glycosylase, family 4 [Microcoleus chthonoplastes PCC
           7420]
 gi|196177444|gb|EDX72450.1| uracil-DNA glycosylase, family 4 [Microcoleus chthonoplastes PCC
           7420]
          Length = 237

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 46/219 (21%), Positives = 83/219 (37%), Gaps = 11/219 (5%)

Query: 49  AIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQ 108
                ++ +    P   +         S+  L         C L +T    +        
Sbjct: 18  TSSTPSDFQPELIPTDAKVPIPPGTYDSMESLADHCNGCQRCELAATRTHAVVGRGNVHA 77

Query: 109 DLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM-RTQIHISMISPWHPPGNRNLS 167
            +MIIG  P  +++  G PF G+ G +L+K+L ++++     ++I  ++   PPGNR  +
Sbjct: 78  PIMIIGEAPGQNEDEQGLPFVGRAGQLLEKILAAVKLDSERDVYICNMNKCRPPGNRVPT 137

Query: 168 NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227
             E+  C+P ++ QI L+ PKI+L  G                +  G W           
Sbjct: 138 PDEVAACKPYLLEQIRLVDPKIILLTGATAVKGLTGEKR-GITKIRGTWMEWE----GRL 192

Query: 228 TLATVHPQELIQYPLI-----KKNTWHALITLKKALKNL 261
            +   HP  L++ P       K   W  +  ++  L  L
Sbjct: 193 CMPIFHPAYLLRNPSREQGKPKWFMWQDIQAVRAKLNEL 231


>gi|167040413|ref|YP_001663398.1| phage SPO1 DNA polymerase-like protein [Thermoanaerobacter sp.
           X514]
 gi|300913700|ref|ZP_07131017.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacter sp.
           X561]
 gi|307723285|ref|YP_003903036.1| phage SPO1 DNA polymerase-like protein [Thermoanaerobacter sp.
           X513]
 gi|166854653|gb|ABY93062.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacter sp.
           X514]
 gi|300890385|gb|EFK85530.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacter sp.
           X561]
 gi|307580346|gb|ADN53745.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacter sp.
           X513]
          Length = 186

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 5/185 (2%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L EL         C L  T    +         +M +G  P   +++ G+PF G+ G +L
Sbjct: 6   LKELYLACLYCTKCDLHKTKTHMVFGEGNLRAKVMFVGEGPGKDEDLQGRPFVGRAGQLL 65

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           +KML+ + + R +++I+ +    PP NR     E++ C P +  Q+ +I+PKI++ +G  
Sbjct: 66  NKMLEDVGLKREEVYIANVVKCRPPNNRVPLQSEVDACLPYLRNQVAIIAPKIIVCLGAT 125

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                 +    K     G+W         +  +AT HP  +++ P   +        +K+
Sbjct: 126 AAKAIID-KNFKITAMRGQWFE----RKGVKIIATYHPAAILRDPEKLEPAMEDFKKIKE 180

Query: 257 ALKNL 261
            L  L
Sbjct: 181 ELDKL 185


>gi|110597629|ref|ZP_01385914.1| phage SPO1 DNA polymerase-related protein [Chlorobium ferrooxidans
           DSM 13031]
 gi|110340749|gb|EAT59226.1| phage SPO1 DNA polymerase-related protein [Chlorobium ferrooxidans
           DSM 13031]
          Length = 218

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 5/203 (2%)

Query: 58  HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117
            + S         A  A  L EL+    +   C L  T  + +    +   ++++IG  P
Sbjct: 8   PVVSTPSGSEHPSASAAEQLAELQKAAMACRKCRLAETRRNVVVGEGSPLAEIVVIGEAP 67

Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177
              ++ SG+PF G++G +L K+LQ++   R +++I  I    PPGNRN    E+  CRP 
Sbjct: 68  GAEEDASGRPFVGRSGQLLTKILQAVHFEREKVYICNILKCRPPGNRNPLEDEIGFCRPW 127

Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237
           + +Q++++ PKI+L +G    N     +        GK               T HP  L
Sbjct: 128 LQQQLQILKPKIILILGKVAANTIL-ENKLSMGMMRGKLIEW----KGFDCFVTYHPAAL 182

Query: 238 IQYPLIKKNTWHALITLKKALKN 260
           ++ P  K+  W  +  ++   K 
Sbjct: 183 LRNPNWKRACWEDVQMMEHHYKK 205


>gi|317052571|ref|YP_004113687.1| phage SPO1 DNA polymerase-like protein [Desulfurispirillum indicum
           S5]
 gi|316947655|gb|ADU67131.1| phage SPO1 DNA polymerase-related protein [Desulfurispirillum
           indicum S5]
          Length = 279

 Score =  176 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 95/227 (41%), Gaps = 3/227 (1%)

Query: 34  EATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHL- 92
            +  +   +  S     Q  T       P      ++     S   L+  L+    C L 
Sbjct: 33  RSLSDPGPRSASRPPVFQQTTRPAAEPPPRQTTTPAVIPSQDSWQRLEEDLKDCQACALA 92

Query: 93  CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHI 152
                + +        D+M+IG  P   ++  G+PF GK+G  LD+++ ++   R +++I
Sbjct: 93  RQGRKTIVMGEGNRQADIMLIGEGPGFDEDRLGRPFVGKSGQKLDQIMLAVGFQREELYI 152

Query: 153 SMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN 212
           + +    PPGNRN    E+ IC+  + RQI L++P+ +L +G    NF +        + 
Sbjct: 153 ANVVKCRPPGNRNPEPGEISICQQFLQRQIRLVNPRFILALGKFAANFLYGESGAP--RT 210

Query: 213 LGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
           LG        +  I  + T HP  L++   +++  W  +  L+    
Sbjct: 211 LGSMREKILHYGDIQVVVTYHPSALLRNENLRRPVWDDVRVLRNLYD 257


>gi|288931880|ref|YP_003435940.1| phage SPO1 DNA polymerase-related protein [Ferroglobus placidus DSM
           10642]
 gi|288894128|gb|ADC65665.1| phage SPO1 DNA polymerase-related protein [Ferroglobus placidus DSM
           10642]
          Length = 198

 Score =  176 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 79/187 (42%), Gaps = 3/187 (1%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           +L E+   ++    C L  T  + +     E   ++ +G  P   +++ G+PF G  G  
Sbjct: 2   TLEEIHEEIKKCRKCELYKTKTNYVPGEGNEKAKIVFVGEAPGREEDLQGRPFVGAAGQY 61

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           L K L+   I R+++ I+ I    PP NR+    E+E C P +++Q+  I P +++ +G 
Sbjct: 62  LTKTLEKCGIKRSEVFITNILKCRPPNNRDPKPEEVEKCFPYLVKQLHEIKPDVIVCLGR 121

Query: 196 KTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
            +            +    + GK          +  + T HP  ++  P +K+     + 
Sbjct: 122 HSAREILNFFGKKFKGISADRGKIFEAELDGKKVKIIPTYHPAAVLYKPQLKEYFEEDIR 181

Query: 253 TLKKALK 259
            +    K
Sbjct: 182 KVASFFK 188


>gi|260654952|ref|ZP_05860440.1| uracil-DNA glycosylase [Jonquetella anthropi E3_33 E1]
 gi|260630267|gb|EEX48461.1| uracil-DNA glycosylase [Jonquetella anthropi E3_33 E1]
          Length = 208

 Score =  176 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 10/190 (5%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L +L   +     C LC T  ST+    +    LMI+G  P   ++  G+PF G+ G +L
Sbjct: 20  LRQLNQEVGGCSRCGLCETRHSTVPGEGSGENGLMIVGEGPGADEDEQGRPFVGRAGQLL 79

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++LQ+  I R++  I+ +    PP NR     E+  C+  +  Q+ L+ PK+++ +GN 
Sbjct: 80  SQILQAAGIDRSRSWITNVVKCRPPKNRTPQIEEVLACQDWLEAQLILLQPKVIVSMGNT 139

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWHAL 251
              +F  + +    +  G+W +       +  +   HP  L++         K  TW  +
Sbjct: 140 PTKWFL-HSSMGITKLRGQWFSW----RGVDLMPMFHPSYLLREDSRSVGSPKYLTWQDI 194

Query: 252 ITLKKALKNL 261
             +KK L  +
Sbjct: 195 QNVKKRLDEV 204


>gi|291541525|emb|CBL14635.1| uracil-DNA glycosylase, family 4 [Ruminococcus bromii L2-63]
          Length = 191

 Score =  176 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 49/188 (26%), Positives = 95/188 (50%), Gaps = 6/188 (3%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            +  ELKS   + H C LC T  + +     E  ++M IG  P +++++ G+PF G+ G 
Sbjct: 3   NTWEELKSACENCHRCELCETRTNVVVGVGNENAEVMFIGEGPGENEDLQGEPFVGRAGK 62

Query: 135 MLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
           +LDKML ++++ R +  +I+ +    PP NR+    E E+C   +  Q+ +I PKI++ +
Sbjct: 63  LLDKMLAAVDLDRNKNIYIANMVKCRPPKNRDPKPEEQEMCIEWLRTQVRMIKPKIIVCL 122

Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253
           G         +D  K  +  G+W       + +  +A +HP  +++ P  K + +   + 
Sbjct: 123 GRIAAARLIKSD-IKITKEHGQWIE----KNGVLMMAMLHPAAILRDPRRKPDAFDDFLK 177

Query: 254 LKKALKNL 261
           L+  +  +
Sbjct: 178 LRDKINEV 185


>gi|125975586|ref|YP_001039496.1| phage SPO1 DNA polymerase-related protein [Clostridium thermocellum
           ATCC 27405]
 gi|256005909|ref|ZP_05430854.1| phage SPO1 DNA polymerase-related protein [Clostridium thermocellum
           DSM 2360]
 gi|281416598|ref|ZP_06247618.1| phage SPO1 DNA polymerase-related protein [Clostridium thermocellum
           JW20]
 gi|125715811|gb|ABN54303.1| phage SPO1 DNA polymerase-related protein [Clostridium thermocellum
           ATCC 27405]
 gi|255990113|gb|EEU00250.1| phage SPO1 DNA polymerase-related protein [Clostridium thermocellum
           DSM 2360]
 gi|281408000|gb|EFB38258.1| phage SPO1 DNA polymerase-related protein [Clostridium thermocellum
           JW20]
 gi|316939705|gb|ADU73739.1| phage SPO1 DNA polymerase-related protein [Clostridium thermocellum
           DSM 1313]
          Length = 189

 Score =  176 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 5/186 (2%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           S  EL  +  +   C L  T  + +         +M++G  P + +++ G PF G  G +
Sbjct: 3   SWEELIKVCSNCTKCGLSKTRTNIVIGRGNINAPMMLVGEGPGEQEDLQGLPFVGPAGKL 62

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           LD +L+++ I     +I+ I    PPGNR  ++ E E+C P +  Q+ L+ P+I++ +G 
Sbjct: 63  LDLLLKAMRIKEDMYYIANIVKCRPPGNRVPTDDEAEMCLPYLRNQLVLVKPRIIVCLGA 122

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
               +  + +A K     G+W            +AT HP  L++    K   W     +K
Sbjct: 123 TAMKYIIDRNA-KITNVRGQWIE----RKGYWIIATFHPAALLRDESKKVLMWEDFKKVK 177

Query: 256 KALKNL 261
           + L ++
Sbjct: 178 QRLDSI 183


>gi|289208938|ref|YP_003461004.1| phage SPO1 DNA polymerase-related protein [Thioalkalivibrio sp.
           K90mix]
 gi|288944569|gb|ADC72268.1| phage SPO1 DNA polymerase-related protein [Thioalkalivibrio sp.
           K90mix]
          Length = 264

 Score =  176 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 53/217 (24%), Positives = 88/217 (40%), Gaps = 10/217 (4%)

Query: 47  DSAIQPITNIRHIHSPLVQQADSIAQ---KACSLHELKSLLRSFHDC-HLCSTSLSTICA 102
             + Q          PLV  AD   +         EL++ +R    C  L +    T+  
Sbjct: 47  AESAQAPGAPSETSEPLVSPADVPEEGGVAVLDWPELEARVRECTACAELAAQRTQTVFG 106

Query: 103 TQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPP 161
                   + +G  P   ++  G+PF G+ G +LD ML ++ + R   + I+ +    PP
Sbjct: 107 VGDRRARWLFVGEAPGAEEDRRGEPFVGRAGQLLDSMLAALGLDRGQDVFIANVLKCRPP 166

Query: 162 GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221
            NR+ S  E   CR  + RQI L+ P++++ +G          D     Q LG+      
Sbjct: 167 NNRDPSPDESRACRGFLDRQIALVQPEVIVALGRIAAQHLLETD-----QPLGRMRGSLH 221

Query: 222 PHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
            +  +P + T HP  L++ P  K   W  L   +  L
Sbjct: 222 RYREVPLVVTYHPAYLLRKPQDKAKAWQDLQRARACL 258


>gi|119486055|ref|ZP_01620117.1| Phage SPO1 DNA polymerase-related protein [Lyngbya sp. PCC 8106]
 gi|119456830|gb|EAW37958.1| Phage SPO1 DNA polymerase-related protein [Lyngbya sp. PCC 8106]
          Length = 243

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 49/218 (22%), Positives = 86/218 (39%), Gaps = 11/218 (5%)

Query: 49  AIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQ 108
           A    ++      P   Q     +   +L E+       H C L +     +        
Sbjct: 17  ATPTPSHFNRDQIPQDVQVQIPPETYQNLDEIADHCNQCHRCVLGNNRTHAVIGRGNLQA 76

Query: 109 DLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIE-IMRTQIHISMISPWHPPGNRNLS 167
            +MIIG  P  +++  G PF G++G +LDK+L+S+      +++IS      PP NR  +
Sbjct: 77  AIMIIGEAPGKNEDEQGLPFVGRSGQLLDKILESVGLSTEREVYISNAIRCRPPENRTPT 136

Query: 168 NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227
             E+E C+P ++ QI L+ P+I+L  G            Q   +  G+W           
Sbjct: 137 AAEIEACKPYLLEQIRLVDPQIILLTGATAVKSLLAEK-QGITKIRGEWRQWE----GRL 191

Query: 228 TLATVHPQELIQYPLI-----KKNTWHALITLKKALKN 260
            +   HP  L++ P +     K   W  +  ++     
Sbjct: 192 CMPIFHPAYLLRNPSLEPGKPKWLMWEDIKKVRNKYDE 229


>gi|56479144|ref|YP_160733.1| DNA polymerase-related protein,bacteriophage-type [Aromatoleum
           aromaticum EbN1]
 gi|56315187|emb|CAI09832.1| DNA polymerase-related protein,bacteriophage-type [Aromatoleum
           aromaticum EbN1]
          Length = 273

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 50/224 (22%), Positives = 89/224 (39%), Gaps = 9/224 (4%)

Query: 37  YESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTS 96
           + ++  + S      P+     + SP  +       +      L + +R+   C LC   
Sbjct: 53  FSAREPQASHRPHPDPVAAAPAVDSPDERARRI---ETLDWEALDADIRACTACRLCERR 109

Query: 97  LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQ-IHISMI 155
              +          M +G  P   ++  G+PF G  G +LD ML +I + R + ++I+  
Sbjct: 110 RQAVPGVGDRQASWMFVGEGPGAEEDQRGEPFVGAAGKLLDAMLAAIGLKRGEGVYIANA 169

Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK 215
               PP NR   N E+E C P + RQI L+ P++L+ +G          D        G+
Sbjct: 170 VKCRPPHNRTPGNDEIEACAPYLARQIALLQPRLLVALGRPAARALLGVD-VAIGAARGQ 228

Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
                     +P + T HP  L++    K   W  L   ++ ++
Sbjct: 229 VF----RCRGMPVVVTYHPAYLLRNQRDKAKVWEDLCFARELME 268


>gi|221215432|ref|ZP_03588396.1| uracil-DNA glycosylase, family 4 [Burkholderia multivorans CGD1]
 gi|221164616|gb|EED97098.1| uracil-DNA glycosylase, family 4 [Burkholderia multivorans CGD1]
          Length = 358

 Score =  175 bits (443), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 51/218 (23%), Positives = 86/218 (39%), Gaps = 6/218 (2%)

Query: 40  QRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLST 99
                  D A           +    +A            L + +     C LC    +T
Sbjct: 130 MPPAADDDFAWFDAAPPGDSATAAEPRAAEAPVAMLDWDALAARVADCTRCRLCEKRTNT 189

Query: 100 ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPW 158
           +        D M+IG  P ++++  G+PF G+ G +LD ML+S+ + R   ++I+ +   
Sbjct: 190 VFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLLDNMLRSLSLQRGENVYIANVIKC 249

Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218
            PPGNRN    E+  C P + RQ+ L+ PK+++ +G          DA       G+   
Sbjct: 250 RPPGNRNPEPDEVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDASIAS-LRGRVHA 308

Query: 219 LCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                  +P + T HP  L++    K   W  L   + 
Sbjct: 309 YE----GVPVIVTYHPAYLLRSLPDKAKAWADLCLARD 342


>gi|297616747|ref|YP_003701906.1| phage SPO1 DNA polymerase-related protein [Syntrophothermus
           lipocalidus DSM 12680]
 gi|297144584|gb|ADI01341.1| phage SPO1 DNA polymerase-related protein [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 228

 Score =  175 bits (443), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 5/187 (2%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            SL EL +   +   C L S     +     +  DLM++G  P   ++  G+PF G  G 
Sbjct: 41  SSLEELAARAGACSRCRLRSGCRQVVFGEGDQKADLMLVGEGPGQVEDEQGRPFVGPAGQ 100

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           +LD++L++  I R +++I+ I    PPGNR  +  E+  CR  +  QI L+SP+I++ +G
Sbjct: 101 LLDRILEACAIRRDEVYITNIVKCRPPGNRLPNPDEVAACRGWLEAQIRLMSPRIIVCLG 160

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
                      A       G+W         +  +A  HP  L++ P +K+  W     +
Sbjct: 161 LLATRTVIEAKA-TMAGIHGQWF----KRGDVWMMAVYHPAALLRDPRLKRPAWEDFKLI 215

Query: 255 KKALKNL 261
           +   + L
Sbjct: 216 RDKYQQL 222


>gi|15922569|ref|NP_378238.1| DNA-directed DNA polymerase [Sulfolobus tokodaii str. 7]
 gi|15623359|dbj|BAB67347.1| 220aa long hypothetical DNA-directed DNA polymerase,
           bacteriophage-type [Sulfolobus tokodaii str. 7]
          Length = 220

 Score =  175 bits (443), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 4/186 (2%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            SL ++K  + S   C L     + +        ++M +G  P ++++  G+PF G  G 
Sbjct: 2   DSLEKIKEEVISCKKCKLWQFRTNAVPGEGYPKAEIMFVGEAPGENEDKEGRPFVGAAGK 61

Query: 135 MLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
           +L +M+ + + + R Q+ I+ +    PP NR+    E+  C P + RQI++I PKI++ +
Sbjct: 62  LLTQMIKEILGLERDQVFITNVVKCRPPNNRDPEEDEITACSPYLDRQIDIIMPKIIVTL 121

Query: 194 GNKTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
           G  +  + F     +     +  GK          I    T HP   +  P ++K     
Sbjct: 122 GRHSTKYIFSKMGENFSSITKVRGKSYVWKYKEKEIIVFPTYHPAAALYNPNLRKILEED 181

Query: 251 LITLKK 256
              +++
Sbjct: 182 FKKIRE 187


>gi|297170986|gb|ADI22001.1| uracil-DNA glycosylase [uncultured myxobacterium HF0200_01L06]
          Length = 257

 Score =  175 bits (443), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 101/263 (38%), Gaps = 16/263 (6%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEAT---YESQRKEKSIDSAIQPITNIR 57
           M   +      +L  A  + +       +E  +        +    K ++     + +  
Sbjct: 1   MDPVQAGELRSLLASARSWLE----ECLEEGLDRIERPLPTAPAPRKPVEEEPA-LASPT 55

Query: 58  HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117
              S  +     + Q    L ++++ L     C L       +        D++ +G  P
Sbjct: 56  AAQSTALPTPGPLTQTRPDLAQVRATLGECTRCALSEKRTQIVFGDGNPDADILFVGEGP 115

Query: 118 SDSDNISGKPFSGKTGNMLDKMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP 176
            + +++ G PF G+ G +L +M++  + + R  ++I  I    PPGNRN    E+  CRP
Sbjct: 116 GEQEDLRGLPFVGRAGELLTQMIEKGMGLARQDVYICNIVKCRPPGNRNPLPTEVNACRP 175

Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236
            +  QI+ ++P++++ +G    +     D     +  G W         I  + T+HP  
Sbjct: 176 FLDGQIDAVAPRVIVSLGKPAASLLLGRD-VAITRVRGTWHEY----RGIALMPTLHPAY 230

Query: 237 LIQY--PLIKKNTWHALITLKKA 257
           L++      ++  W  L +    
Sbjct: 231 LLRQYTAENRRWVWEDLKSALAR 253


>gi|38493049|pdb|1UI1|A Chain A, Crystal Structure Of Uracil-Dna Glycosylase From Thermus
           Thermophilus Hb8
          Length = 205

 Score =  175 bits (443), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 11/192 (5%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           +L  L++  ++   C L       +         L I+G  P + ++ +G+PF GK G +
Sbjct: 2   TLELLQAQAQNCTACRLXEGRTRVVFGEGNPDAKLXIVGEGPGEEEDKTGRPFVGKAGQL 61

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC-RPIIMRQIELISPKILLFIG 194
           L+++L++  I R +++I+ I    PP NR     E +IC    +++QIELI+P+I++ +G
Sbjct: 62  LNRILEAAGIPREEVYITNIVKCRPPQNRAPLPDEAKICTDKWLLKQIELIAPQIIVPLG 121

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWH 249
                FF         +  GKW         I      HP  L++ P       K  TW 
Sbjct: 122 AVAAEFFLGEK-VSITKVRGKWYEW----HGIKVFPXFHPAYLLRNPSRAPGSPKHLTWL 176

Query: 250 ALITLKKALKNL 261
            +  +K+AL  L
Sbjct: 177 DIQEVKRALDAL 188


>gi|218442796|ref|YP_002381116.1| phage SPO1 DNA polymerase-related protein [Cyanothece sp. PCC 7424]
 gi|218175154|gb|ACK73886.1| phage SPO1 DNA polymerase-related protein [Cyanothece sp. PCC 7424]
          Length = 209

 Score =  174 bits (442), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 62/196 (31%), Positives = 92/196 (46%), Gaps = 10/196 (5%)

Query: 71  AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130
           +     L  LK        C L       +  + T   D+M+IG  P  +++ +GKPF+G
Sbjct: 13  SNSTSPLKTLKKTCARCTQCGLHKNRTKVVFGSGTLEADIMLIGEAPGQTEDKTGKPFTG 72

Query: 131 KTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
           K G +LDKML SI + R QI+++ I    PP NR  +  E+E CRP ++ QIE I+PK +
Sbjct: 73  KAGKLLDKMLASINLERGQIYLTNIIKCRPPNNRTPTEKEIETCRPYLLAQIEFINPKFI 132

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KK 245
           +  G            +   Q  GKW            ++  HP  L++ P +     K 
Sbjct: 133 VLAGGSAYRGLTG-KRKPISQVRGKWFKWHNS----KCISIFHPAYLLRNPSLEKGSPKW 187

Query: 246 NTWHALITLKKALKNL 261
            TW  LI+LK+ L  L
Sbjct: 188 LTWQDLISLKRKLNKL 203


>gi|312135590|ref|YP_004002928.1| phage SPO1 DNA polymerase-like protein [Caldicellulosiruptor
           owensensis OL]
 gi|311775641|gb|ADQ05128.1| phage SPO1 DNA polymerase-related protein [Caldicellulosiruptor
           owensensis OL]
          Length = 185

 Score =  174 bits (442), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 6/187 (3%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           +  EL++   S   C +     + +     +   L+ +G  P + ++  GKPF G+ G  
Sbjct: 3   TWEELENACISCEKCPISKNRTNVVVGDGNKNAKLVFVGEAPGEEEDKQGKPFVGRAGKF 62

Query: 136 LDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           LD  L S+E+ R    +I  I    PP NR  +  E + C P +  QI+LISPKI++ +G
Sbjct: 63  LDLALTSLELSREKDFYICNILKCRPPNNRVPTEAEAQNCLPFLRAQIKLISPKIIVCLG 122

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
                +    D  K  Q+ GKW            +AT HP  L++ P  +++ +  L ++
Sbjct: 123 ATAMKYILGKDL-KITQDRGKWFE----KGGFWIMATYHPAALLRDPGKREDFYRDLKSV 177

Query: 255 KKALKNL 261
           K+ L+ L
Sbjct: 178 KQKLEKL 184


>gi|145220372|ref|YP_001131081.1| phage SPO1 DNA polymerase-related protein [Prosthecochloris
           vibrioformis DSM 265]
 gi|145206536|gb|ABP37579.1| phage SPO1 DNA polymerase-related protein [Chlorobium
           phaeovibrioides DSM 265]
          Length = 191

 Score =  174 bits (442), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 52/188 (27%), Positives = 83/188 (44%), Gaps = 5/188 (2%)

Query: 74  ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
           + SL  L         C L  T  S +         LM+IG  P   ++ SG+PF G++G
Sbjct: 3   SSSLEALAKEADKCRKCRLADTRHSVVFGEGNPEAGLMVIGEAPGADEDASGRPFIGRSG 62

Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
            +L K+LQ++E  R ++ I+ I    PP NRN    E+  C P + +Q+E+I PK++L +
Sbjct: 63  QLLTKILQAVEFSRDEVFIANIVKCRPPENRNPLQDEIACCTPWLEKQLEIIRPKVILLL 122

Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253
           G    N     +        GK               T HP  L++ P  K+     +  
Sbjct: 123 GKVAANTIL-VNQTALGTMRGKVLEW----KGTDCFVTYHPAALLRNPNWKRGCREDVQL 177

Query: 254 LKKALKNL 261
           +++   NL
Sbjct: 178 MRRHYDNL 185


>gi|320102815|ref|YP_004178406.1| phage SPO1 DNA polymerase-like protein [Isosphaera pallida ATCC
           43644]
 gi|319750097|gb|ADV61857.1| phage SPO1 DNA polymerase-related protein [Isosphaera pallida ATCC
           43644]
          Length = 334

 Score =  174 bits (442), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 53/239 (22%), Positives = 92/239 (38%), Gaps = 13/239 (5%)

Query: 26  WVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLR 85
            V   P  +A   + R  +S  +++  I                  Q++ +L  L   + 
Sbjct: 95  TVAASPVLKAPERTNRPTRSSPTSV--IATALFEEDGFATPPLPSDQRSNALTVLAEEVS 152

Query: 86  SFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML-DKMLQSI 143
           S   C  L ++   T+    +    LM IG  P + ++  G PF G+ G +L D +++ +
Sbjct: 153 SCQACPALVASRTQTVFGVGSPTARLMFIGEAPGEEEDAKGVPFVGRAGQLLTDMIVKGM 212

Query: 144 EIMRTQIHISMISPWHPPG----NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199
            + R Q++I+      P      NR     E+  C   + RQIE++ P+ L  +G     
Sbjct: 213 GLTRDQVYIANACKCRPTDAEGRNRTPDPSEIRNCASYLDRQIEIVRPEFLCLLGKTAAQ 272

Query: 200 FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
                      Q   +       H  +  + T HP  L++ P  KK  W  L  L  A+
Sbjct: 273 AVLG-TPLPLAQLRKRLH----RHRGMTVVVTFHPAYLLRNPSDKKEAWEDLKMLMSAM 326


>gi|302338167|ref|YP_003803373.1| phage SPO1 DNA polymerase-related protein [Spirochaeta smaragdinae
           DSM 11293]
 gi|301635352|gb|ADK80779.1| phage SPO1 DNA polymerase-related protein [Spirochaeta smaragdinae
           DSM 11293]
          Length = 240

 Score =  174 bits (442), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 88/221 (39%), Gaps = 6/221 (2%)

Query: 42  KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTIC 101
           +++   S              L          A  L E+   + S   C L       + 
Sbjct: 24  RKRRHPSLRDAGFTGLKASPALRSVPARDTDPALLLKEIAQEVSSCTACRLHEGRHHAVP 83

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHP 160
                   ++IIG  P   ++ SG+PF G  G  LDK +++I + R++   I  +    P
Sbjct: 84  GEGVVHPMVLIIGEGPGAQEDASGRPFVGPAGQYLDKWMKAIGLSRSEHLFIGNVIKCRP 143

Query: 161 PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220
           PGNR+    E   CRP + RQI+++ PK +L +G        +         +G+     
Sbjct: 144 PGNRDPLPDEAAACRPFLDRQIDILRPKAILTVGRIAMQLLLDT-----TDGIGRRHGKR 198

Query: 221 TPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
             +  IP + T HP  +++ P  +   W  L  L+  L+ L
Sbjct: 199 FEYRGIPLVPTYHPSGVLRNPEYRAPVWKDLKALRSLLEEL 239


>gi|37521977|ref|NP_925354.1| DNA polymerase related protein [Gloeobacter violaceus PCC 7421]
 gi|35212976|dbj|BAC90349.1| glr2408 [Gloeobacter violaceus PCC 7421]
          Length = 229

 Score =  174 bits (442), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 47/217 (21%), Positives = 86/217 (39%), Gaps = 11/217 (5%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
                ++    P       +        ++++   +   C L  T    +         L
Sbjct: 14  AAPPQVQFDRIPNDAGVTIVPGTYSDFEQIRTHCNACFRCELGKTRTHAVVGRGNPQALL 73

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM-RTQIHISMISPWHPPGNRNLSNI 169
           M+IG  P ++++++G PF GK G +LDK+L++++      ++++ I    PPGNR  +  
Sbjct: 74  MVIGEGPGENEDLTGIPFVGKAGQLLDKILEAVQFDTEKDVYVANIVKCRPPGNRKPAPE 133

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           EM+ C   +  QI +I PKILL  G          D +   +  G+W            +
Sbjct: 134 EMKACLGYLNEQIRMIDPKILLLAGGTAVEGLTG-DKRGITKLRGQWLQWQGRW----VM 188

Query: 230 ATVHPQELIQYPLI-----KKNTWHALITLKKALKNL 261
              HP  L++ P       K   W  +  ++     L
Sbjct: 189 PFFHPAFLLRNPSRDAGSPKWLAWQDIQQVRAKYDEL 225


>gi|325107250|ref|YP_004268318.1| phage SPO1 DNA polymerase-related protein [Planctomyces
           brasiliensis DSM 5305]
 gi|324967518|gb|ADY58296.1| phage SPO1 DNA polymerase-related protein [Planctomyces
           brasiliensis DSM 5305]
          Length = 329

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 6/183 (3%)

Query: 77  LHELKSLLRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           L  L   +     C  L  T   T+        ++M IG  P   ++  G+PF G+ G +
Sbjct: 141 LASLAERVAGCKRCPELARTRTQTVFGVGNPMAEVMFIGEAPGADEDKQGEPFVGRAGKL 200

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           L++++++    R +++I  I    PPGNRN + IE   CR  +  QIE ++P+ ++  G 
Sbjct: 201 LNRIIEACGWEREELYICNILRCRPPGNRNPTPIEASHCREYLDGQIETVNPRFIVCWGT 260

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
                    +     +  GK             L T HP  L++ P  +      L  L 
Sbjct: 261 VAAQNLLGVNT-PIGRMRGKLYEY----GRSQVLCTYHPSYLLRNPSARSLVRDDLQILL 315

Query: 256 KAL 258
           K +
Sbjct: 316 KEM 318


>gi|307299315|ref|ZP_07579116.1| phage SPO1 DNA polymerase-related protein [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306915111|gb|EFN45497.1| phage SPO1 DNA polymerase-related protein [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 205

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 8/190 (4%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L EL S +     C L S+  +T+    +    ++ +G  P   ++ SG+PF G+ G +L
Sbjct: 11  LLELNSKISDCSLCPLSSSRTNTVPGEGSIETPVVFVGEGPGADEDASGRPFVGRAGELL 70

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            K+L+S+++ R  I I+ I    PP NR  +  E + C P ++ Q+ +I PK+++ +G  
Sbjct: 71  TKILESVKLSREDIFITNIVKCRPPKNRVPTAEEQKACSPYMLSQLAIIRPKLIVALGAT 130

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWHAL 251
             ++F N +  +  +  G+  +       I   A  HP  L++         K  TW  +
Sbjct: 131 ALSYFVNEEGIQITKVRGRIFDWI---GGIKVFAMFHPSYLLRNASRAPGSPKSLTWEDI 187

Query: 252 ITLKKALKNL 261
             ++K    L
Sbjct: 188 QNVRKMYDQL 197


>gi|220905704|ref|YP_002481015.1| phage SPO1 DNA polymerase-like protein [Cyanothece sp. PCC 7425]
 gi|219862315|gb|ACL42654.1| phage SPO1 DNA polymerase-related protein [Cyanothece sp. PCC 7425]
          Length = 238

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 56/223 (25%), Positives = 92/223 (41%), Gaps = 11/223 (4%)

Query: 45  SIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQ 104
            +  A    T +     P   Q    A    SL E+       H C L  +    +    
Sbjct: 14  PLPEAEIVSTPVDKEQIPSSAQVPIPAGTYTSLEEMAPHCDRCHRCDLGQSRTHAVVGRG 73

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM-RTQIHISMISPWHPPGN 163
                +MIIG  P  +++ +G PF GK G +L+K+L ++++  +  ++I  I    PPGN
Sbjct: 74  HPQAPIMIIGEGPGQTEDETGLPFVGKAGQLLEKILAAVQLDSQQDVYICNIVKCRPPGN 133

Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH 223
           R  +  EM  CRP ++ Q+ L+ PKI+L  G          D +   +  G+W       
Sbjct: 134 RVPTPEEMAACRPYLLEQLRLVDPKIILLTGATAVKGLTG-DKRGITKIRGQWLEWE--- 189

Query: 224 SIIPTLATVHPQELIQYPLI-----KKNTWHALITLKKALKNL 261
                +  +HP  L++ P       K   W  + T++  L  L
Sbjct: 190 -GRLCMPILHPAYLLRNPSKEPGSPKWLMWQDIQTVRAKLDEL 231


>gi|284052961|ref|ZP_06383171.1| phage SPO1 DNA polymerase-related protein [Arthrospira platensis
           str. Paraca]
 gi|291571857|dbj|BAI94129.1| uracil-DNA glycosylase [Arthrospira platensis NIES-39]
          Length = 238

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 44/206 (21%), Positives = 81/206 (39%), Gaps = 11/206 (5%)

Query: 62  PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121
           P   +         +L ++         C L       +         +MIIG  P   +
Sbjct: 35  PQNAKTPIPPGTYQTLAQIADHCNRCSRCELGKNRTHAVIGRGNPTAPIMIIGEAPGQHE 94

Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRT-QIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180
           +  G PF G++G +LD +L S+ +    +++IS      PP NR  +  E++ C+P ++ 
Sbjct: 95  DEQGLPFVGRSGKLLDNILDSVGLSTDTEVYISNAIRCRPPENRTPTASELQACKPYLLE 154

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
           QI LI+P+I+L  G          D +   +  G+W            +   HP  L++ 
Sbjct: 155 QIRLINPQIILLTGATAVKSILG-DKRPITKIRGQWFQWE----GRQCMPIFHPAYLLRN 209

Query: 241 PLI-----KKNTWHALITLKKALKNL 261
                   K   W  +  +++ L  +
Sbjct: 210 SSRDVGKPKWLMWQDMQVVRQRLNEI 235


>gi|319941916|ref|ZP_08016237.1| hypothetical protein HMPREF9464_01456 [Sutterella wadsworthensis
           3_1_45B]
 gi|319804569|gb|EFW01439.1| hypothetical protein HMPREF9464_01456 [Sutterella wadsworthensis
           3_1_45B]
          Length = 316

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 98/231 (42%), Gaps = 7/231 (3%)

Query: 37  YESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQK--ACSLHELKSLLRSFHDCHLCS 94
            ++ +  ++  ++    T  + +  P V  +  +  K  +     L++L +    C L +
Sbjct: 73  PQAPQSARAAQTSAASPTVPQAVAQPAVGMSTELLSKIASADWQALQTLSQHCTACALSA 132

Query: 95  -TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIE-IMRTQIHI 152
                 + +    G  L+++G  P   +++ G PF GK+G +L  ML S+  + R    I
Sbjct: 133 MGRQHVVFSDGGPGPKLVVVGEAPGAEEDLQGIPFVGKSGKLLTAMLDSLGLVRRRDCVI 192

Query: 153 SMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN--DAQKTY 210
             +    PP NRN    E+  C   + RQ+ELI P +L   G    +       +     
Sbjct: 193 LNVLKCRPPRNRNPQPEEIVCCGHWLARQLELIKPDVLFLAGRFAISSLLKPADEMFSIS 252

Query: 211 QNLGKWSNLCTP-HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
           +  G+      P    +P +AT HP  L++ P  K   W  L+ LK A+K 
Sbjct: 253 KMRGRIHLAQLPDGRQVPAVATYHPSYLLRSPAAKSKAWEDLLLLKAAMKQ 303


>gi|320106538|ref|YP_004182128.1| phage SPO1 DNA polymerase-like protein [Terriglobus saanensis
           SP1PR4]
 gi|319925059|gb|ADV82134.1| phage SPO1 DNA polymerase-related protein [Terriglobus saanensis
           SP1PR4]
          Length = 319

 Score =  174 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 7/209 (3%)

Query: 49  AIQPITNIRHIHSPLVQQADSIAQ-KACSLHELKSLLRSFHDCHL-CSTSLSTICATQTE 106
           A   +  I       + Q  ++   KA +L  ++  +     C L  +   + + A    
Sbjct: 109 APPDMPLISFNARAELPQHRALPDDKAATLQSVRHHIGDCTRCPLAYAGRRNIVFADGNP 168

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL 166
              LM +G  P   ++ SG PF GK G +L+ M+ ++ + R +++I+ I    PPGNRN 
Sbjct: 169 NARLMFVGEGPGADEDASGVPFVGKAGQLLNNMINAMGLKREEVYIANIVKCRPPGNRNP 228

Query: 167 SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII 226
             +E   C   ++ QI+++ P+I++ +G     +             G+W ++       
Sbjct: 229 EPVEANTCSQFLVDQIDIVQPQIIVALGAIAATYLLGVKRPLVA-LRGQWHDV----RGS 283

Query: 227 PTLATVHPQELIQYPLIKKNTWHALITLK 255
            T  T HP  L++ P +K   W  L  + 
Sbjct: 284 KTAVTYHPAYLLRDPSMKGEAWKDLQRVM 312


>gi|289577329|ref|YP_003475956.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacter
           italicus Ab9]
 gi|297543618|ref|YP_003675920.1| phage SPO1 DNA polymerase-like protein [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
 gi|289527042|gb|ADD01394.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacter
           italicus Ab9]
 gi|296841393|gb|ADH59909.1| phage SPO1 DNA polymerase-related protein [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
          Length = 186

 Score =  174 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 44/185 (23%), Positives = 82/185 (44%), Gaps = 5/185 (2%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L EL         C L  T  + +         ++ +G  P   +++ G+PF G+ G +L
Sbjct: 6   LKELYLECLHCTKCDLSKTKTNMVFGEGNLRAKVIFVGEGPGRDEDLQGRPFVGRAGQLL 65

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           +KML+ + + R +++I+ I    PP NR     E++ C P +  Q+ +I+PKI++ +G  
Sbjct: 66  NKMLEEVGLKRGEVYIANIVKCRPPNNRVPLQSEVDACLPYLRNQVAIIAPKIIVCLGAT 125

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                 +    K     G+W         +  +AT HP  +++ P   +        +K+
Sbjct: 126 AAKAIID-KNFKITVMRGQWFE----RKGVKIIATYHPAAILRDPEKLEPAMEDFKKIKE 180

Query: 257 ALKNL 261
            L  L
Sbjct: 181 ELDKL 185


>gi|154248846|ref|YP_001409671.1| phage SPO1 DNA polymerase-related protein [Fervidobacterium nodosum
           Rt17-B1]
 gi|154152782|gb|ABS60014.1| phage SPO1 DNA polymerase-related protein [Fervidobacterium nodosum
           Rt17-B1]
          Length = 202

 Score =  174 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 88/186 (47%), Gaps = 9/186 (4%)

Query: 80  LKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKM 139
           ++  +++   CHL     +T+         +M +G  P + ++  G+PF GK G +L K+
Sbjct: 10  IEERIKNCQSCHLHLLRKNTVPGEGNIYSPIMFVGEGPGEEEDNQGRPFVGKAGQLLTKI 69

Query: 140 LQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199
           ++S+ I R  ++I+ +    PP NR  +N+E++ C   +  QIE+I+P++++ +G+    
Sbjct: 70  IESVNIKREDVYITNVVKCRPPNNRVPTNLEIQSCSHYLTAQIEIINPRMIIPLGSTAAT 129

Query: 200 FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK-----NTWHALITL 254
           FF     +   +  GK          I      HP  L++ P  +K      TW  +  +
Sbjct: 130 FFLG-KEEPITKIRGKKFTWKGD---IIIFPMFHPSYLLRNPSKEKGSPKDLTWQDIKEV 185

Query: 255 KKALKN 260
           ++    
Sbjct: 186 RRYYDQ 191


>gi|305662671|ref|YP_003858959.1| phage SPO1 DNA polymerase-related protein [Ignisphaera aggregans
           DSM 17230]
 gi|304377240|gb|ADM27079.1| phage SPO1 DNA polymerase-related protein [Ignisphaera aggregans
           DSM 17230]
          Length = 214

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 3/189 (1%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           S  EL++ +R+   C L     + +     +   +M IG  P  +++  G+PF G  G +
Sbjct: 6   SWQELENAIRNCTRCQLYRNRKNAVPGEGPKDAFVMFIGEAPGATEDEMGRPFVGAAGKL 65

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           L  +++++ I R  ++I+ +    PP NR  S+ E+E C   +  QI LI PKI++ +GN
Sbjct: 66  LTMIMENLGISRDSVYITNVVKCRPPNNREPSDEEIEKCGIYLETQIRLIKPKIIVTLGN 125

Query: 196 KTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
                 F       +   +  G+  N+      +  + T+HP   +  P +K      L 
Sbjct: 126 IAGKTIFFMGKERWEGIMKMRGRVYNMKIFDLTVYVIPTIHPAAGLYNPNLKNLLIQDLK 185

Query: 253 TLKKALKNL 261
            +K+ +  +
Sbjct: 186 IVKECIDKM 194


>gi|312793048|ref|YP_004025971.1| phage SPO1 DNA polymerase-like protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312876719|ref|ZP_07736698.1| phage SPO1 DNA polymerase-related protein [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311796450|gb|EFR12800.1| phage SPO1 DNA polymerase-related protein [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|312180188|gb|ADQ40358.1| phage SPO1 DNA polymerase-related protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 185

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 6/187 (3%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           +  EL+S   S   C +     + +     +   L+ +G  P + ++  GKPF G+ G  
Sbjct: 3   TWEELESACLSCEKCPISKNRTNVVVGDGNKNAKLVFVGEAPGEEEDKQGKPFVGRAGKF 62

Query: 136 LDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           LD  L S+E+ R    +I  I    PP NR  + +E + C P +  QI+LI+PKI++ +G
Sbjct: 63  LDLALTSLELSREKDFYICNILKCRPPNNRVPTEVEAQNCLPFLRAQIKLIAPKIIVCLG 122

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
                +    D  K  Q+ GKW            +AT HP  L++ P  +++ +  L ++
Sbjct: 123 ATAMKYILGKDL-KITQDRGKWFE----KGGFWIMATYHPAALLRDPGKREDFYRDLKSV 177

Query: 255 KKALKNL 261
           K+ L+ +
Sbjct: 178 KEKLEKI 184


>gi|113474288|ref|YP_720349.1| phage SPO1 DNA polymerase-like protein [Trichodesmium erythraeum
           IMS101]
 gi|110165336|gb|ABG49876.1| phage SPO1 DNA polymerase-related protein [Trichodesmium erythraeum
           IMS101]
          Length = 242

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 11/193 (5%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            ++ ++         C L     + +        ++M+IG  P  +++  G PF GK+G 
Sbjct: 46  KTMEQITFHCNQCRRCELGENRTNAVIGRGNPEAEIMVIGEAPGQNEDEQGLPFVGKSGQ 105

Query: 135 MLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
           +LDK+LQS+E+   +  +IS      PP NR  +  E+  C+P ++ QI L++PKI+L  
Sbjct: 106 LLDKILQSVELSSDRHVYISNAIRCRPPENRTPTLKEVGACKPYLLEQIRLVNPKIILLT 165

Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTW 248
           G          D +   +  G+W            +   HP  L++ P       K   W
Sbjct: 166 GATAVKALTG-DKRGITKIRGQWIEWE----GRLCMPIFHPAYLLRNPSREPGKPKWLMW 220

Query: 249 HALITLKKALKNL 261
             +  +K+ L+ L
Sbjct: 221 QDIQAVKQKLEEL 233


>gi|70606003|ref|YP_254873.1| uracil DNA glycosylase superfamily protein [Sulfolobus
           acidocaldarius DSM 639]
 gi|68566651|gb|AAY79580.1| uracil DNA glycosylase superfamily protein [Sulfolobus
           acidocaldarius DSM 639]
          Length = 213

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 80/188 (42%), Gaps = 4/188 (2%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
            L E+ + ++    C L     + +         +M IG  P ++++  G+PF G  G +
Sbjct: 2   ELDEIANEIKVCRKCKLWMDRRNAVPGEGNPKAKVMFIGEAPGETEDEEGRPFVGSAGKL 61

Query: 136 LDKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           L K+++    I R ++ I+ +    PP NR+    E+  C   +  QI LI P++++ +G
Sbjct: 62  LTKLIEDTLGIKRDEVFITNVVKCRPPNNRDPEEDEITACSSYLDLQIRLIKPQVIVTLG 121

Query: 195 NKTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
             + ++     N +     ++ GK         +I    T HP   +  P ++       
Sbjct: 122 RHSTSYILSKANIEFHSITKSRGKVYEWKIDDHVINIFPTYHPAAALYNPNLRSVLEEDF 181

Query: 252 ITLKKALK 259
             ++K + 
Sbjct: 182 KMIRKLIN 189


>gi|222085329|ref|YP_002543859.1| DNA polymerase bacteriophage-type (uracil-DNA glycosylase) protein
           [Agrobacterium radiobacter K84]
 gi|221722777|gb|ACM25933.1| DNA polymerase bacteriophage-type (uracil-DNA glycosylase) protein
           [Agrobacterium radiobacter K84]
          Length = 255

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 82/238 (34%), Positives = 124/238 (52%), Gaps = 6/238 (2%)

Query: 28  FDEPNNEATYESQRKEKSIDSAIQPITNIRH-----IHSPLVQQADSIAQKACSLHELKS 82
            + P   A    Q + +                        V+QA   A+ A SL ELK+
Sbjct: 15  VETPQPAARPAQQPERRQAAPKAAAPAAKPRSAPAIPDEQAVEQARFAAESARSLSELKT 74

Query: 83  LLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142
            L +F+ C+L +++ STI A+      +M+IG  PS  D+  G PF+G+TG +LDKML +
Sbjct: 75  ALEAFNSCNLKNSARSTIFASGAPEGRIMVIGPMPSADDDREGAPFAGRTGLLLDKMLAA 134

Query: 143 IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202
           I + R  I ++ + PW PPGNR  S  E+EICRP I RQI L  P+ LL +GN T   FF
Sbjct: 135 IGLKRNDILLTNVIPWRPPGNRAPSAPEIEICRPFIERQITLAEPQALLLLGNFTARHFF 194

Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            ++        G+W ++      IP +A++HPQEL+  P+ K+  W+ L+  +  +  
Sbjct: 195 GSNETIHG-LRGQWRDVTISGRAIPAIASLHPQELLTAPINKRLAWNDLLAFRTRIDA 251


>gi|302872283|ref|YP_003840919.1| phage SPO1 DNA polymerase-related protein [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302575142|gb|ADL42933.1| phage SPO1 DNA polymerase-related protein [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 185

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 6/187 (3%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           +  EL++   S   C +     + +     +   L+ +G  P + ++  GKPF G+ G  
Sbjct: 3   TWEELENACISCEKCPISKNRTNVVVGDGNKNAKLVFVGEAPGEEEDKQGKPFVGRAGKF 62

Query: 136 LDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           LD  L S+E+ R    +I  I    PP NR  + +E + C P +  QI+LISPKI++ +G
Sbjct: 63  LDLALTSLELSREKDFYICNILKCRPPNNRVPTEVEAQNCLPFLKAQIKLISPKIIVCLG 122

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
                +    D  K  Q+ GKW            +AT HP  L++ P  +++ +  L ++
Sbjct: 123 ATAMKYILGKDL-KITQDRGKWFE----KGGFWIMATYHPAALLRDPGKREDFYRDLKSV 177

Query: 255 KKALKNL 261
           K+ L+ +
Sbjct: 178 KERLEKI 184


>gi|206560476|ref|YP_002231240.1| uracil DNA glycosylase superfamily protein [Burkholderia
           cenocepacia J2315]
 gi|198036517|emb|CAR52414.1| uracil DNA glycosylase superfamily protein [Burkholderia
           cenocepacia J2315]
          Length = 343

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 54/240 (22%), Positives = 89/240 (37%), Gaps = 18/240 (7%)

Query: 29  DEPNNEATYESQRKEKSIDSAIQP------------ITNIRHIHSPLVQQADSIAQKACS 76
           D P  +A   +            P                         +       A  
Sbjct: 92  DRPRAQAASPASTDTMPPTGDAPPAADDDFAWFDAAPPGESVPVPAAESRPAGTPVAALD 151

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
              L + +     C LC    +T+        D M+IG  P ++++  G+PF G+ G +L
Sbjct: 152 WDALAARVADCTLCRLCEKRTNTVFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLL 211

Query: 137 DKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           D MLQS+ + R   ++I+ +    PPGNRN    E+  C P + RQ+ L+ PK+++ +G 
Sbjct: 212 DNMLQSLSLKRGDNVYIANVIKCRPPGNRNPEPDEVASCEPYLQRQVALVKPKLIVALGR 271

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
                    DA       G+          +P + T HP  L++    K   W  L   +
Sbjct: 272 FAAQTLLKTDASIAS-LRGRVHAYE----GVPVIVTYHPAYLLRSLQDKSKAWADLCLAR 326


>gi|75907116|ref|YP_321412.1| phage SPO1 DNA polymerase-like protein [Anabaena variabilis ATCC
           29413]
 gi|75700841|gb|ABA20517.1| Phage SPO1 DNA polymerase-related protein [Anabaena variabilis ATCC
           29413]
          Length = 227

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 47/206 (22%), Positives = 84/206 (40%), Gaps = 11/206 (5%)

Query: 62  PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121
           P   +         ++ EL         C L ST    +         +M++G  P  ++
Sbjct: 23  PTDAKIPIPPGTYTNMTELAQHCNQCQRCELGSTRTHAVVGRGNLKAPIMVVGEAPGQNE 82

Query: 122 NISGKPFSGKTGNMLDKMLQSIE-IMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180
           + +G PF G++G +LDK+L S++      ++I+ I+   PP NR  +  EM  C P ++ 
Sbjct: 83  DETGLPFVGRSGQLLDKILASVDLTTEHDVYIANINKCRPPDNRVPTPNEMAACLPYLLE 142

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
           QI L++PKI+L  G          D +   +  G+W            +   HP  L++ 
Sbjct: 143 QIRLVNPKIILLTGATAVKGLTG-DKRGITKIRGQWIEWE----GHLCMPIFHPSYLLRN 197

Query: 241 PLI-----KKNTWHALITLKKALKNL 261
           P       K   W  +  ++     +
Sbjct: 198 PSKEQGSPKWLMWQDIRAVRAKYDEI 223


>gi|134094968|ref|YP_001100043.1| putative DNA polymerase-related protein, bacteriophage-type
           [Herminiimonas arsenicoxydans]
 gi|133738871|emb|CAL61918.1| Putative phage SPO1 DNA polymerase-related protein, uracil-DNA
           glycosylase family [Herminiimonas arsenicoxydans]
          Length = 283

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 90/239 (37%), Gaps = 12/239 (5%)

Query: 31  PNNEATYESQRKEK---SIDSAIQPITNIRHIHSPLVQQADSIAQKAC-SLHELKSLLRS 86
           P+ + T  +           +A  P+     + +  V  + S A        +LKS++ S
Sbjct: 44  PSMQTTAVAVTTSAWAERTPAAAVPLHAPVTLTASEVATSTSFADIVQMDWAQLKSVVAS 103

Query: 87  FHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM 146
              C LC +   T+     +    + +G  P  +++  G+PF G  G +LD M  ++ + 
Sbjct: 104 CTQCGLCKSRTQTVFGVGDQKARWLFVGEGPGRNEDFQGEPFVGPAGKLLDNMFGAMGLK 163

Query: 147 R-TQIHISMISPWHPPGNRNLS----NIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
           R    +I+ I    P             E+  C P + RQI LI P +++ +G       
Sbjct: 164 RGENTYIANIVKCRPIDAGKHDRPPAAEEVAACIPYLERQIALIKPTVIVALGKTAAISL 223

Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
              D        GK       ++ +P + T HP  L++    K   W  L    +   +
Sbjct: 224 LKLDPATPV---GKLRGTVHRYADLPLIVTYHPAYLLRNLKDKSKAWADLCLAMQTYAD 279


>gi|210620993|ref|ZP_03292378.1| hypothetical protein CLOHIR_00321 [Clostridium hiranonis DSM 13275]
 gi|210154977|gb|EEA85983.1| hypothetical protein CLOHIR_00321 [Clostridium hiranonis DSM 13275]
          Length = 194

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 47/186 (25%), Positives = 84/186 (45%), Gaps = 5/186 (2%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           S   L+S  ++ + C L     + +         +++IG  P + +++SG PF G  G +
Sbjct: 6   SWEILESACKTCNRCRLAENRTNVVVGGGNRKAKILLIGEGPGEKEDLSGVPFVGPAGQL 65

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           LDKML  I++ R  ++I+ +    PPGNR+    E   C   +  Q  LI P+I++ +G 
Sbjct: 66  LDKMLACIDLSRNDVYIANVVKCRPPGNRDPEPDEKNCCIEYLRYQFALIKPQIIVCLGR 125

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
                  ++   +  +  G W            +AT HP  L++    K+  +  L  +K
Sbjct: 126 IAAQSIIDSK-FRITKEHGIWYKKKNCW----MIATYHPSALLRDAAKKRTAFEDLKEIK 180

Query: 256 KALKNL 261
           K +  L
Sbjct: 181 KKIDEL 186


>gi|152979854|ref|YP_001353212.1| DNA polymerase bacteriophage-type [Janthinobacterium sp. Marseille]
 gi|151279931|gb|ABR88341.1| DNA polymerase bacteriophage-type [Janthinobacterium sp. Marseille]
          Length = 286

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 48/236 (20%), Positives = 85/236 (36%), Gaps = 12/236 (5%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P  +     Q      D             S ++Q A  IA  +    +LK ++ +  +C
Sbjct: 53  PLRQQVVAEQSLSAWGDETPAAPVLAPAAVSAVLQPARDIA--SMGWEQLKEVVSNCTEC 110

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQ 149
            LC     T+     +    + +G  P  +++  G+PF G  G +LD M  ++ + R   
Sbjct: 111 GLCKGRTQTVFGVGDQKAKWLFVGEGPGRNEDFQGEPFVGPAGKLLDNMFIAMGLKRGEN 170

Query: 150 IHISMISPWHPPGNRN----LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
            +I+ I    P             E + C P + RQI L++P +++ +G          D
Sbjct: 171 TYIANIVKCRPTDENKRDRAPVAQESDACMPYLQRQIALVNPTVIVALGKTAALSLLKLD 230

Query: 206 A-QKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
                 +  G           IP + T HP  L++    K   W  L    +   +
Sbjct: 231 PATPVARLRGTVHRYA----DIPVVVTYHPAYLLRTLKDKSKAWADLCLAMQTYAD 282


>gi|163783925|ref|ZP_02178897.1| predicted repair protein [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880810|gb|EDP74342.1| predicted repair protein [Hydrogenivirga sp. 128-5-R1-1]
          Length = 214

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 5/182 (2%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
            K   L EL   ++    C L       +         LM +G  P   ++  G+PF G+
Sbjct: 30  DKTKLLEELNKEIQECKKCDLYKNRKQAVLGEGNPNAKLMFVGEAPGADEDRLGRPFVGR 89

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191
            G +L +++++    R + +I+ ++   PPGNR  +  E E C P + +QIE+I PK+L 
Sbjct: 90  AGQLLTRLIEATGHKREEFYIANVNKCRPPGNRTPTPWEQEACFPFLEKQIEIIDPKVLC 149

Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
            +G      F         +  G+  N          + T+HP  +++ P  ++  +  +
Sbjct: 150 LLGAAAARAFLK-RPVSITKERGEVLNWE----GRKLILTLHPAYILRNPSAEELLFEDI 204

Query: 252 IT 253
             
Sbjct: 205 KK 206


>gi|186682234|ref|YP_001865430.1| phage SPO1 DNA polymerase-related protein [Nostoc punctiforme PCC
           73102]
 gi|186464686|gb|ACC80487.1| phage SPO1 DNA polymerase-related protein [Nostoc punctiforme PCC
           73102]
          Length = 227

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 11/205 (5%)

Query: 62  PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121
           P   +         ++ EL       H C L  T    +         +M+IG  P  ++
Sbjct: 23  PTDAKIAIAPGTYSTITELAQHCDRCHRCPLGDTRTHAVVGRGNLKAPIMVIGEAPGQNE 82

Query: 122 NISGKPFSGKTGNMLDKMLQSIE-IMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180
           + +G PF G++G +L+K+L S+       ++I+ I+   PP NR  +  E+  C P ++ 
Sbjct: 83  DETGLPFVGRSGQLLEKILASVNLTTEHDVYIANINKCRPPDNRVPTPTEVAACLPYLLE 142

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
           QI L+ PKI+L  G          D +   +  G+W            +   HP  L++ 
Sbjct: 143 QIRLVDPKIILLTGATAVKGITG-DKRGITKIRGQWLEWE----GRLCMPIFHPSYLLRN 197

Query: 241 PLI-----KKNTWHALITLKKALKN 260
           P       K   W  +  ++  L  
Sbjct: 198 PSKERGAPKWLMWQDIQAVRAKLDE 222


>gi|282895506|ref|ZP_06303643.1| Phage SPO1 DNA polymerase-related protein [Raphidiopsis brookii D9]
 gi|281199539|gb|EFA74402.1| Phage SPO1 DNA polymerase-related protein [Raphidiopsis brookii D9]
          Length = 225

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 48/192 (25%), Positives = 78/192 (40%), Gaps = 11/192 (5%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           +++EL     + H C L  T    +         +MIIG  P   ++ +G PF GK+G +
Sbjct: 36  NINELTLHCENCHRCGLGKTRTHAVVGRGNPQAKIMIIGEAPGQHEDETGLPFVGKSGQL 95

Query: 136 LDKMLQSIE-IMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           LDK+L S+       ++I  I    PP NR  ++ E   CRP ++ QI L+ PKI+L  G
Sbjct: 96  LDKILASVNLTTEQDVYICNIVKCRPPENRVPTSEESNACRPYLLEQIRLVDPKIILLTG 155

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWH 249
                    N      +  G+W            +   HP  L++         K   W 
Sbjct: 156 ATAVKGVTGNKL-PITKIRGQWLEWE----GRLCMPIFHPSYLLRNSAKGQGSPKWLMWQ 210

Query: 250 ALITLKKALKNL 261
            +  ++     +
Sbjct: 211 DIQEIRNRYDQI 222


>gi|326204226|ref|ZP_08194086.1| phage SPO1 DNA polymerase-related protein [Clostridium
           papyrosolvens DSM 2782]
 gi|325985737|gb|EGD46573.1| phage SPO1 DNA polymerase-related protein [Clostridium
           papyrosolvens DSM 2782]
          Length = 190

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 84/186 (45%), Gaps = 5/186 (2%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           +  +L S   +  +C L  T  + +         +M IG  P + ++I G PF G  G +
Sbjct: 3   NWDQLNSTCSNCRNCDLAGTRTNIVIGRGNPSAPIMFIGEGPGEQEDIQGLPFVGPAGQL 62

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           L+ +L++++    + +I+ +    PP NR  +  E E C P +  Q+ LI P+I++ +G+
Sbjct: 63  LETLLEALKFKPDEYYIANVVKCRPPNNRVPNEEEAEKCLPYLRNQVSLIRPRIIVCLGS 122

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
               +    D  K  +  G+W            + T HP  L++    K+  +  +  +K
Sbjct: 123 TAAKYVVARD-IKITKIRGQWIE----RKKFWIMPTFHPAALLRDQSKKELLFKDIKEVK 177

Query: 256 KALKNL 261
           K +  L
Sbjct: 178 KKINQL 183


>gi|307596060|ref|YP_003902377.1| phage SPO1 DNA polymerase-related protein [Vulcanisaeta distributa
           DSM 14429]
 gi|307551261|gb|ADN51326.1| phage SPO1 DNA polymerase-related protein [Vulcanisaeta distributa
           DSM 14429]
          Length = 215

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 47/187 (25%), Positives = 82/187 (43%), Gaps = 6/187 (3%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            EL +L+ +   C L  +    +         +MIIG  P + ++  G+PF G  G +L 
Sbjct: 14  DELVNLMLNCTKCKLHKSRRRVVPGEGPLNAKIMIIGEAPGEREDEEGRPFVGAAGQLLT 73

Query: 138 KMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197
           K+L ++ I R +++I+ +    PP NR+    E+E CRP ++ QI +I P+I++ +G  +
Sbjct: 74  KLLNNVGIRREEVYITNVVKCRPPNNRDPEPDEIEACRPYLITQILMIRPQIIICLGRHS 133

Query: 198 KNFFFNNDAQK------TYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
                                 GK  N+      +  L T HP   +  P ++      L
Sbjct: 134 AREILTMAGYPEKSVSNISSIRGKVFNVKLGDLNVKVLPTYHPAAALYNPRLRGVIEEDL 193

Query: 252 ITLKKAL 258
             +K  L
Sbjct: 194 RKVKTLL 200


>gi|307609081|emb|CBW98520.1| hypothetical protein LPW_03501 [Legionella pneumophila 130b]
          Length = 212

 Score =  173 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 51/184 (27%), Positives = 84/184 (45%), Gaps = 5/184 (2%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
             L  L   + S   C L  T   T+ +       LMIIG  P   ++  G+PF GK G 
Sbjct: 29  KHLAALADEVASCVRCSLHKTRTQTVFSRGNPKAKLMIIGEAPGFYEDQKGQPFVGKAGF 88

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           +L+KM++SIE+    ++I+ +    PP NR+ +  E+  C   + RQI+LI P ++L +G
Sbjct: 89  LLNKMIRSIEMTENDVYIANVLKCRPPNNRDPALEEISQCSSFLTRQIKLIKPHLILALG 148

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
                F  +           +  N    +   P + + HP  L++ P  KK  +   + +
Sbjct: 149 RFAGQFLLDKPLPLK-----QLRNHIHYYDNTPFIVSYHPAYLLRNPSDKKKAYIDWLAV 203

Query: 255 KKAL 258
           K  L
Sbjct: 204 KNFL 207


>gi|313903540|ref|ZP_07836930.1| phage SPO1 DNA polymerase-related protein [Thermaerobacter
           subterraneus DSM 13965]
 gi|313466093|gb|EFR61617.1| phage SPO1 DNA polymerase-related protein [Thermaerobacter
           subterraneus DSM 13965]
          Length = 307

 Score =  173 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 44/187 (23%), Positives = 83/187 (44%), Gaps = 6/187 (3%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
            +  L+ +++    C L +     +         LM+IG  P   ++  G+PF G+ G +
Sbjct: 13  DMATLEQVVKGCTACGLRAGCRGVVFGDGNPSARLMLIGEGPGADEDRLGRPFVGRAGQL 72

Query: 136 LDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           LD++L +    R +  +I+ I    PPGNR  +  E   C P +  Q+ L+ P I++ +G
Sbjct: 73  LDRILAACGFDRQRHVYIANIVKCRPPGNRTPTPEERAACLPNLRAQMWLVQPVIVVLLG 132

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
           +       +  A +  +  G+W         +  + T HP  L++ P +K+  WH    +
Sbjct: 133 STALQALVDP-AARISRARGQWIV----RDGVWYMPTYHPAALLRNPALKRECWHDFKKV 187

Query: 255 KKALKNL 261
               + L
Sbjct: 188 IDKYREL 194


>gi|304319860|ref|YP_003853503.1| hypothetical protein PB2503_01417 [Parvularcula bermudensis
           HTCC2503]
 gi|303298763|gb|ADM08362.1| hypothetical protein PB2503_01417 [Parvularcula bermudensis
           HTCC2503]
          Length = 299

 Score =  173 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 65/268 (24%), Positives = 102/268 (38%), Gaps = 25/268 (9%)

Query: 7   LSQEQILTIALFYADSGVYWVFDE-------------PNNEATYESQRKEKSID----SA 49
           L +   L +  +Y  SGV                   P   A    +R+         + 
Sbjct: 22  LDRATALALLAWYRASGVDTAESAEPSDMRDWPTHGFPVPRALAGGERRPPLPPGNEVAP 81

Query: 50  IQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD 109
                +        V  A ++A+   +L  L   +  F  C L + +  T+      G  
Sbjct: 82  TAKPPSSAGGSDEAVMAATALAEATTTLPALADAIAGFDGCPLKAAARRTVVYDGVIGAR 141

Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH------ISMISPWHPPGN 163
           L+IIG  P   ++  GKPF GK G +LD ML +I   RT+        I+    W PPGN
Sbjct: 142 LLIIGEGPGRDEDRIGKPFVGKAGGLLDLMLHAIGYSRTEADGRGDVLITNAVYWRPPGN 201

Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC-TP 222
           R  +  E  IC P + R I L +P++++ +GN +    +   A    +  G W     + 
Sbjct: 202 RAPTGEEQAICLPFLRRFITLAAPEVIILMGNVSTQALY-PGAPGITRTRGSWREWPLSD 260

Query: 223 HSIIPTLATVHPQELIQYPLIKKNTWHA 250
                 L   HP  L++ P  K+  W  
Sbjct: 261 GRQAAVLPMFHPAFLLRAPAQKRLAWAD 288


>gi|52840517|ref|YP_094316.1| bacteriophage related DNA polymerase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52627628|gb|AAU26369.1| bacteriophage related DNA polymerase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 212

 Score =  173 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 5/184 (2%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
             L  L   + S   C L  T   T+ +       LMIIG  P   ++  G+PF GK G 
Sbjct: 29  KHLAALADEVASCVRCSLHKTRTQTVFSRGNPKAKLMIIGEAPGFYEDQKGQPFVGKAGL 88

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           +L+KM++SIE+    I+I+ +    PP NR+ +  E+  C   + RQI+LI P ++L +G
Sbjct: 89  LLNKMIRSIEMTENDIYIANVLKCRPPNNRDPALEEISQCSSFLTRQIQLIKPHLILALG 148

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
                F  +           +  N    +   P + + HP  L++ P  KK  +   + +
Sbjct: 149 RFAGQFLLDKPLPLK-----QLRNHIHYYDNTPFIVSYHPAYLLRNPSDKKKAYIDWLAV 203

Query: 255 KKAL 258
           K  L
Sbjct: 204 KNFL 207


>gi|319790238|ref|YP_004151871.1| phage SPO1 DNA polymerase-related protein [Thermovibrio
           ammonificans HB-1]
 gi|317114740|gb|ADU97230.1| phage SPO1 DNA polymerase-related protein [Thermovibrio
           ammonificans HB-1]
          Length = 235

 Score =  173 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 51/196 (26%), Positives = 86/196 (43%), Gaps = 4/196 (2%)

Query: 68  DSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127
           +        L ++K   +    C LC T  + +        +LM +G  P + +++ G+P
Sbjct: 40  ERAFDPIEELEKVKEEAQKCCKCRLCKTRHNVVFGEGDPQTNLMFVGEAPGEQEDLQGRP 99

Query: 128 FSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP 187
           F G+ G +L K L    + R QI+I+ +    PP NR+ +  E+E C P + +QIELISP
Sbjct: 100 FVGRAGQLLSKFLNLYGVTRDQIYITNVLKCRPPNNRDPAPDEIEACYPFLEKQIELISP 159

Query: 188 KILLFIGNKTKNFFFN-NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKN 246
           K++L +G        N  +     +  GK          +  + T HP  L++    +  
Sbjct: 160 KVILCLGAFAARTILNLPERTPISRIRGKEHKTTIGGVEVTVIPTFHPAYLLRNRRGEPE 219

Query: 247 TWHAL---ITLKKALK 259
               L   + L   LK
Sbjct: 220 FQKDLELALRLAGFLK 235


>gi|254424996|ref|ZP_05038714.1| uracil-DNA glycosylase, family 4 [Synechococcus sp. PCC 7335]
 gi|196192485|gb|EDX87449.1| uracil-DNA glycosylase, family 4 [Synechococcus sp. PCC 7335]
          Length = 233

 Score =  173 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 51/224 (22%), Positives = 90/224 (40%), Gaps = 13/224 (5%)

Query: 47  DSAIQPITNIRHIHSPLVQQADSIAQKACS---LHELKSLLRSFHDCHLCSTSLSTICAT 103
            S I+            +  + S+     +   L  L    +S   C L  T  + + + 
Sbjct: 10  ASDIEATPTPTDFDPDKIPTSASVPIPPGTYDSLTPLAVHCKSCQRCELAQTRTNVVVSR 69

Query: 104 QTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM-RTQIHISMISPWHPPG 162
                 +M+IG  P   ++  G PF G++G +L+K+L ++ +     ++I  I    PPG
Sbjct: 70  GNPNAPIMVIGEGPGQQEDEQGLPFVGRSGQLLEKILGAVRLDTEKDVYICNIVKCRPPG 129

Query: 163 NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP 222
           NRN    E+  CRP I+ QI L+ PKI+L  G         ++ +   +  G W      
Sbjct: 130 NRNPLASEINACRPYILEQIRLVDPKIILLTGATAVKGIIPSEKRGITKIRGTWIEWE-- 187

Query: 223 HSIIPTLATVHPQELIQYPLI-----KKNTWHALITLKKALKNL 261
                 +  +HP  L++ P       K   W  +  ++  L  +
Sbjct: 188 --GRQCMPILHPAYLLRNPSRDPGKPKWLMWQDIQAVRAKLDEI 229


>gi|327398392|ref|YP_004339261.1| phage SPO1 DNA polymerase-like protein [Hippea maritima DSM 10411]
 gi|327181021|gb|AEA33202.1| phage SPO1 DNA polymerase-related protein [Hippea maritima DSM
           10411]
          Length = 209

 Score =  173 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 43/174 (24%), Positives = 70/174 (40%), Gaps = 5/174 (2%)

Query: 87  FHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM 146
              C L  T  + +        DLM +G  P   +++ G+PF G+ G +L  +L+ I I 
Sbjct: 41  CKGCELHKTRTNVVFGEGNINADLMFVGEAPGRDEDVQGRPFVGRAGRLLRDILRDIGIK 100

Query: 147 RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206
              ++I+      PP NR+    E+  C   + +QI LI PKI+  +G  +     N   
Sbjct: 101 PQDVYIANCLKCRPPNNRDPLPEELVACFGYLKQQISLIKPKIIATLGRYSTYELTNQKG 160

Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
                  GK          I  +   HP  L++ P         L  +K+ L+ 
Sbjct: 161 ALGT-LRGKVFVY----GNIKVIPLYHPAYLLRNPKAVDVFIEDLKKVKQLLEQ 209


>gi|317970146|ref|ZP_07971536.1| phage SPO1 DNA polymerase-related protein [Synechococcus sp.
           CB0205]
          Length = 199

 Score =  173 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 15/199 (7%)

Query: 73  KACSLH-ELKSLLRSFHDCHLCS---TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128
            A SL  +L SL  S   C LC    +    + +       LM+IG  P   ++  G+PF
Sbjct: 2   TATSLEQDLASLAESCDACRLCKLGSSRSQVVVSRGNPQARLMVIGEGPGAQEDEQGQPF 61

Query: 129 SGKTGNMLDKMLQSIEIM-RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP 187
            G++G +LD+ML+S+ I      ++  I    PP NR  + +EM  C+P + RQI L+ P
Sbjct: 62  VGRSGQLLDRMLESVGIDSNHDAYVCNIVKCRPPENRKPTALEMASCKPWLDRQIALVDP 121

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI---- 243
            ++L  G                +  G+W            +   HP  L++ P      
Sbjct: 122 AVILLAGATAVEGLLGIKG-GMTKIRGQWRQWEGRW----LMPVFHPSYLLRNPSKERGA 176

Query: 244 -KKNTWHALITLKKALKNL 261
            K  TW  L  +++ L  L
Sbjct: 177 PKWLTWQDLQDVQRRLAQL 195


>gi|282856757|ref|ZP_06266018.1| uracil-DNA glycosylase family 4 protein [Pyramidobacter piscolens
           W5455]
 gi|282585380|gb|EFB90687.1| uracil-DNA glycosylase family 4 protein [Pyramidobacter piscolens
           W5455]
          Length = 205

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 84/187 (44%), Gaps = 10/187 (5%)

Query: 80  LKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKM 139
           L+        C LC +  + +    +    +M +G  P + ++ SG+PF G  G +L ++
Sbjct: 22  LRDAANRCEQCGLCRSRKNVVVGEGSLTSRIMFVGEGPGEVEDNSGRPFVGPAGQLLTRI 81

Query: 140 LQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199
           L++ +  R  ++I+ I    PP NR     E+  C+  +  QI L+ P+I++ +GN    
Sbjct: 82  LEAAKFSRDDVYITNIVKCRPPNNRVPEIEEVLSCQRWLEAQIALLQPQIIVCLGNTPLK 141

Query: 200 FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK-----NTWHALITL 254
           +F +   +   +  G+W            +   HP  L++    ++      TW  +  +
Sbjct: 142 WFLHGT-EGITKMRGRWFTW----RGAALMPMFHPSYLLRNQSRERGGPKDLTWRDIQEI 196

Query: 255 KKALKNL 261
           ++  ++L
Sbjct: 197 RQRYESL 203


>gi|317121114|ref|YP_004101117.1| phage SPO1 DNA polymerase-related protein [Thermaerobacter
           marianensis DSM 12885]
 gi|315591094|gb|ADU50390.1| phage SPO1 DNA polymerase-related protein [Thermaerobacter
           marianensis DSM 12885]
          Length = 333

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 89/198 (44%), Gaps = 6/198 (3%)

Query: 65  QQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNIS 124
            + ++   +   +  L+ +++    C L +     +         LM+IG  P   ++  
Sbjct: 2   ARPEAELLRIADMAALEQVVKGCTACRLRAGCRGVVFGDGNPAARLMLIGEGPGADEDRL 61

Query: 125 GKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIE 183
           G+PF G+ G +LD++L +    R +  +I+ +    PPGNR  +  E   C P +  Q+ 
Sbjct: 62  GRPFVGRAGQLLDRILAACGFDRQRHVYIANVVKCRPPGNRTPTPDERAACLPNLRAQMR 121

Query: 184 LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI 243
           L++P I++ +G+       +  A +  +  G+W         +  + T HP  L++ P +
Sbjct: 122 LVNPVIVVLLGSTALQALIDP-AARITRWRGQW----IHRDGVWYMPTYHPAALLRNPSL 176

Query: 244 KKNTWHALITLKKALKNL 261
           K++ WH    +    + L
Sbjct: 177 KRDCWHDFKKVIDKYREL 194


>gi|209524410|ref|ZP_03272959.1| phage SPO1 DNA polymerase-related protein [Arthrospira maxima
           CS-328]
 gi|209495201|gb|EDZ95507.1| phage SPO1 DNA polymerase-related protein [Arthrospira maxima
           CS-328]
          Length = 234

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 45/206 (21%), Positives = 81/206 (39%), Gaps = 11/206 (5%)

Query: 62  PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121
           P             +L ++         C L       +         +MIIG  P   +
Sbjct: 31  PKNAHTPIPPGTYQTLAQIADHCNRCSRCQLGKNRTHAVIGRGNPTAPIMIIGEAPGQHE 90

Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRT-QIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180
           +  G PF G++G +LDK+L S+ +    +++IS      PP NR  +  E++ C+P ++ 
Sbjct: 91  DEQGLPFVGRSGQLLDKILDSVGLSTDTEVYISNAIRCRPPENRTPTASELQACKPYLLE 150

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
           QI LI+P+I+L  G          D +   +  G+W            +   HP  L++ 
Sbjct: 151 QIRLINPQIILLTGATAVKSLLG-DKRPITKIRGQWFQWE----GRQCMPIFHPAYLLRN 205

Query: 241 PLI-----KKNTWHALITLKKALKNL 261
                   K   W  +  +++ L  +
Sbjct: 206 SSRDVGKPKWLMWQDMQAVRQRLNEI 231


>gi|222529822|ref|YP_002573704.1| phage SPO1 DNA polymerase-related protein [Caldicellulosiruptor
           bescii DSM 6725]
 gi|222456669|gb|ACM60931.1| phage SPO1 DNA polymerase-related protein [Caldicellulosiruptor
           bescii DSM 6725]
          Length = 185

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 6/187 (3%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           +  EL++   S   C +     + +     +   L+ +G  P + ++  GKPF G+ G  
Sbjct: 3   TWEELENACLSCEKCPISKNRTNVVVGDGNKNAKLVFVGEAPGEEEDKQGKPFVGRAGKF 62

Query: 136 LDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           LD  L S+E+ R    +I  I    PP NR  + +E + C P +  QI+LISPKI++ +G
Sbjct: 63  LDLALASLELSREKDFYICNILKCRPPNNRVPTELEAQNCLPFLRAQIKLISPKIIVCLG 122

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
                +    D  K  Q+ GKW            +AT HP  L++ P  +++ +  L ++
Sbjct: 123 ATAMKYILGKDL-KITQDRGKWFE----KGSFLIMATYHPAALLRDPGKREDFYRDLKSV 177

Query: 255 KKALKNL 261
           K+ L+ +
Sbjct: 178 KERLEKI 184


>gi|187251249|ref|YP_001875731.1| Uracil-DNA glycosylase [Elusimicrobium minutum Pei191]
 gi|186971409|gb|ACC98394.1| Uracil-DNA glycosylase [Elusimicrobium minutum Pei191]
          Length = 297

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 55/235 (23%), Positives = 93/235 (39%), Gaps = 16/235 (6%)

Query: 39  SQRKEKSIDSAIQPITNIRHIHSPLVQQADSI-AQKACSLHELKSLLRSFHDCHLCSTSL 97
           S     S  +  Q +     + +P   +   I + K   L+ L   + +   C L  T L
Sbjct: 55  SAESVLSAQNNAQTLKEDSSMPAPQTPKTKKINSNKEAELNALAEQILTCKKCPLGETRL 114

Query: 98  STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP 157
           + +         LM IG  P   ++  G+PF G+ G +L KM++++ + R ++ I+ +  
Sbjct: 115 NAVPGEGNADAKLMFIGEGPGFDEDHQGRPFIGRAGTLLTKMIEAMGLKREEVFIANMVK 174

Query: 158 WH----------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207
            H             +R  S  E+  CR  I  QI LI P+ ++ +G          DA 
Sbjct: 175 CHPMTDPSNPEKHGNDRAPSKEEIAYCRKYIEAQIALIQPEFIVALGGVAAKSLIK-DAD 233

Query: 208 KTYQNLGKWSNLCTPH----SIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
                  K   L   +         +AT HP  L++ P  KK+ W  L  + K +
Sbjct: 234 SLGALRNKVHTLELDNFDLEGKTKIVATYHPAALLRNPNWKKDAWADLQMVMKEM 288


>gi|302342653|ref|YP_003807182.1| phage SPO1 DNA polymerase-related protein [Desulfarculus baarsii
           DSM 2075]
 gi|301639266|gb|ADK84588.1| phage SPO1 DNA polymerase-related protein [Desulfarculus baarsii
           DSM 2075]
          Length = 236

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 51/216 (23%), Positives = 81/216 (37%), Gaps = 5/216 (2%)

Query: 45  SIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQ 104
           S D   + +       SP+   A         L  +   +     C L       +    
Sbjct: 26  SADDLARLLALAGAAPSPVASVAAPPPDLPLELESMALAVGQCKRCPLAHGRNKAVFGQG 85

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   LM IG  P   ++  G PF G  G +LD ML ++ + R  ++++ I    PP NR
Sbjct: 86  PDDARLMFIGEAPGAQEDQQGLPFVGPAGRLLDNMLAAVGLRREAVYVTNIVKCRPPNNR 145

Query: 165 NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS 224
           +    E+  CRP +  Q   + PK++  +G         +DA       G W        
Sbjct: 146 DPRPEEVAACRPWLEAQARAVGPKVICTLGRPAALAVLGSDA-PISALRGNWHEA----L 200

Query: 225 IIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
               L T HP  L++ P  K   +  +  L  ALK+
Sbjct: 201 GARVLPTFHPAYLLRSPQRKGQAYQDMKALALALKD 236


>gi|148358472|ref|YP_001249679.1| bacteriophage-like DNA polymerase [Legionella pneumophila str.
           Corby]
 gi|296105821|ref|YP_003617521.1| DNA polymerase bacteriophage-type [Legionella pneumophila 2300/99
           Alcoy]
 gi|148280245|gb|ABQ54333.1| bacteriophage related DNA polymerase [Legionella pneumophila str.
           Corby]
 gi|295647722|gb|ADG23569.1| DNA polymerase bacteriophage-type [Legionella pneumophila 2300/99
           Alcoy]
          Length = 212

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 51/184 (27%), Positives = 84/184 (45%), Gaps = 5/184 (2%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
             L  L   + S   C L  T   T+ +       LMIIG  P   ++  G+PF GK G 
Sbjct: 29  KHLAALADEVASCVRCSLHKTRTQTVFSRGNPKAKLMIIGEAPGFYEDQKGQPFVGKAGF 88

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           +L+KM++SIE+    ++I+ +    PP NR+ +  E+  C   + RQI+LI P ++L +G
Sbjct: 89  LLNKMIRSIEMTENDVYIANVLKCRPPNNRDPALEEISQCSSFLTRQIKLIKPHLILALG 148

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
                F  +           +  N    +   P + + HP  L++ P  KK  +   + +
Sbjct: 149 RFAGQFLLDKPLPLK-----QLRNHIHYYDNTPFIVSYHPAYLLRNPSDKKKAYIDWLAV 203

Query: 255 KKAL 258
           K  L
Sbjct: 204 KNFL 207


>gi|302392090|ref|YP_003827910.1| phage SPO1 DNA polymerase-related protein [Acetohalobium arabaticum
           DSM 5501]
 gi|302204167|gb|ADL12845.1| phage SPO1 DNA polymerase-related protein [Acetohalobium arabaticum
           DSM 5501]
          Length = 214

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 57/185 (30%), Positives = 89/185 (48%), Gaps = 5/185 (2%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
           Q+  +L E+K +      C L    + T+  T      LM +G  P   ++  G+PF GK
Sbjct: 21  QRFNNLDEIKEVAVECERCELHKECIQTVFGTGNSDTGLMFVGEGPGRQEDEQGEPFVGK 80

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191
            G + +K+L++ EI R  ++IS I    PPGNRN    EM+ C   + ++I+LI P I++
Sbjct: 81  AGQLFNKILKAAEIKRKDVYISNIVKCRPPGNRNPKFSEMKSCLWFLAQEIKLIQPMIIV 140

Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
            +G+       + D  K  +  G W            L T HP  L++    KK TWH  
Sbjct: 141 PLGSIAVKGLLDPDG-KITELRGNWVERE----GYYLLPTFHPAALLRNEQWKKPTWHDF 195

Query: 252 ITLKK 256
           + +KK
Sbjct: 196 LKIKK 200


>gi|150020065|ref|YP_001305419.1| phage SPO1 DNA polymerase-related protein [Thermosipho
           melanesiensis BI429]
 gi|149792586|gb|ABR30034.1| phage SPO1 DNA polymerase-related protein [Thermosipho
           melanesiensis BI429]
          Length = 200

 Score =  172 bits (435), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 76/184 (41%), Gaps = 9/184 (4%)

Query: 82  SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
             ++    C L     + +         ++ +G  P + +++ G+PF G+ G +L K+L+
Sbjct: 12  ERIKECKACPLHENRTNVVPGEGNLDSPIVFVGEGPGEEEDLQGRPFVGRAGQLLTKILE 71

Query: 142 SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
           S+ I R  ++I+ I    PP NR  +  E  IC   +  Q+E+I+PK+++ +G      F
Sbjct: 72  SVNIKREDVYITNIVKCRPPNNRTPTKEEASICSHFLFAQLEIINPKMIVTLGKPALELF 131

Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWHALITLKK 256
                    +  G           I      HP  L++ P       K  TW  +  ++K
Sbjct: 132 LGRT-VAITKVRGNEFKWR---GGIIVFPMFHPSYLLRNPSKAKGSPKDLTWQDIKRVRK 187

Query: 257 ALKN 260
               
Sbjct: 188 YYDQ 191


>gi|170290590|ref|YP_001737406.1| Uracil-DNA glycosylase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170174670|gb|ACB07723.1| Uracil-DNA glycosylase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 193

 Score =  172 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 1/185 (0%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L +L   +     C L       +         +M +G  P  +++  G+PF G  G +L
Sbjct: 3   LEDLAEEILRCEKCPLHLNRKRAVPGEGNPNSRIMFVGEAPGRNEDEMGRPFVGAAGKLL 62

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           +++L SI + R  + I+ +    PP NR+    E+E C P +  QIELI P+IL+ +G  
Sbjct: 63  EELLISIGLRRQDVFITNVVKCRPPNNRDPRPEEIEACLPYLKAQIELIDPEILVPLGRH 122

Query: 197 TKNFFFNNDAQ-KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
           +         +    +  GK   +    +I   L T+HP   +  P +K         LK
Sbjct: 123 SVGVLLGRIGEISILRVRGKVYEVEVFGAIRKVLPTLHPAAALYNPRLKPLIREDFEKLK 182

Query: 256 KALKN 260
             + +
Sbjct: 183 SLISS 187


>gi|332157701|ref|YP_004422980.1| hypothetical protein PNA2_0058 [Pyrococcus sp. NA2]
 gi|331033164|gb|AEC50976.1| hypothetical protein PNA2_0058 [Pyrococcus sp. NA2]
          Length = 197

 Score =  172 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 44/188 (23%), Positives = 87/188 (46%), Gaps = 3/188 (1%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           + +L+  +++   C L     + +    +    +M +G  P   ++  G PF GK G +L
Sbjct: 8   MKKLEERIKNCKKCPLWELRTNPVPGDGSYNAKVMFVGEAPGYWEDQMGLPFVGKAGKVL 67

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           D++L+SI + R +++I+ I    PP NR+ +  E++ C P +  QI++I PK+++ +G  
Sbjct: 68  DELLKSIGLSRNEVYITNIVKCRPPNNRDPTEEEIKACSPYLDAQIDIIRPKVIVTLGRF 127

Query: 197 TKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253
           +  +         +   +  GK     T    +  +   HP   +  P ++K        
Sbjct: 128 SMGYILRKYGFAVEPISKVHGKVFEARTLFGKLYIIPMYHPAVALYRPQLRKELEEDFKK 187

Query: 254 LKKALKNL 261
           LK  L +L
Sbjct: 188 LKALLASL 195


>gi|312127133|ref|YP_003992007.1| phage SPO1 DNA polymerase-like protein [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777152|gb|ADQ06638.1| phage SPO1 DNA polymerase-related protein [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 188

 Score =  171 bits (434), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 6/187 (3%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           +  EL++   S   C +     + +     +   L+ +G  P + ++  GKPF G+ G  
Sbjct: 3   TWEELENACLSCEKCPISKNRTNVVVGDGNKNAKLVFVGEAPGEEEDKQGKPFVGRAGKF 62

Query: 136 LDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           LD  L S+E+ R    +I  I    PP NR  + +E + C P +  QI+LISPKI++ +G
Sbjct: 63  LDLALTSLELSREKDFYICNILKCRPPNNRVPTEVEAQNCLPFLRAQIKLISPKIIVCLG 122

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
                +    D  K  Q+ GKW            +AT HP  L++ P  +++ +  L ++
Sbjct: 123 ATAMKYILGKDL-KITQDRGKWFE----KGNFLIMATYHPAALLRDPGKREDFYRDLKSV 177

Query: 255 KKALKNL 261
           K+ L+ +
Sbjct: 178 KERLEKI 184


>gi|54296304|ref|YP_122673.1| hypothetical protein lpp0333 [Legionella pneumophila str. Paris]
 gi|53750089|emb|CAH11481.1| hypothetical protein lpp0333 [Legionella pneumophila str. Paris]
          Length = 200

 Score =  171 bits (434), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 5/184 (2%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
             L  L   + S   C L  T   T+ +       LMIIG  P   ++  G+PF GK G 
Sbjct: 17  KHLATLADEVASCVRCSLHKTRTQTVFSRGNPKAKLMIIGEAPGFYEDQKGQPFVGKAGF 76

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           +L+KM++SIE+    ++I+ +    PP NR+ +  E+  C   + RQI+LI P ++L +G
Sbjct: 77  LLNKMIRSIEMTENDVYIANVLKCRPPNNRDPALEEISQCSSFLTRQIKLIKPHLILALG 136

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
                F  +       Q               P + + HP  L++ P  KK  +   + +
Sbjct: 137 RFAGQFLLD-KPLPLKQLRNHIHYYNN----TPFIVSYHPAYLLRNPSDKKKAYIDWLAV 191

Query: 255 KKAL 258
           K  L
Sbjct: 192 KSFL 195


>gi|17230510|ref|NP_487058.1| hypothetical protein alr3018 [Nostoc sp. PCC 7120]
 gi|17132112|dbj|BAB74717.1| alr3018 [Nostoc sp. PCC 7120]
          Length = 227

 Score =  171 bits (434), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 47/206 (22%), Positives = 84/206 (40%), Gaps = 11/206 (5%)

Query: 62  PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121
           P   +         ++ EL         C L ST    +         +M++G  P  ++
Sbjct: 23  PKDAKIPIPPGTYTNMTELAQHCNQCQRCELGSTRTHAVVGRGNLKAPIMVVGEAPGQNE 82

Query: 122 NISGKPFSGKTGNMLDKMLQSIE-IMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180
           + +G PF G++G +LDK+L S++      ++I+ I+   PP NR  +  EM  C P ++ 
Sbjct: 83  DETGLPFVGRSGQLLDKILASVDLTTEHDVYIANINKCRPPDNRVPTPNEMAACLPYLLE 142

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
           QI L++PKI+L  G          D +   +  G+W            +   HP  L++ 
Sbjct: 143 QIRLVNPKIILLTGATAVKGLTG-DKRGITKIRGQWIEWA----GHLCMPIFHPSYLLRN 197

Query: 241 PLI-----KKNTWHALITLKKALKNL 261
           P       K   W  +  ++     +
Sbjct: 198 PSKEQGSPKWLMWQDIRAVRTKYDEI 223


>gi|54293266|ref|YP_125681.1| hypothetical protein lpl0314 [Legionella pneumophila str. Lens]
 gi|53753098|emb|CAH14545.1| hypothetical protein lpl0314 [Legionella pneumophila str. Lens]
          Length = 200

 Score =  171 bits (434), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 51/184 (27%), Positives = 84/184 (45%), Gaps = 5/184 (2%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
             L  L   + S   C L  T   T+ +       LMIIG  P   ++  G+PF GK G 
Sbjct: 17  KHLAALADEVASCVRCSLHKTRTQTVFSRGNPKAKLMIIGEAPGFYEDQKGQPFVGKAGF 76

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           +L+KM++SIE+    ++I+ +    PP NR+ +  E+  C   + RQI+LI P ++L +G
Sbjct: 77  LLNKMIRSIEMTENDVYIANVLKCRPPNNRDPALEEISQCSSFLTRQIKLIKPHLILALG 136

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
                F  +           +  N    +   P + + HP  L++ P  KK  +   + +
Sbjct: 137 RFAGQFLLDKPLPLK-----QLRNHIHYYDNTPFIVSYHPAYLLRNPSDKKKAYIDWLAV 191

Query: 255 KKAL 258
           K  L
Sbjct: 192 KNFL 195


>gi|325967890|ref|YP_004244082.1| uracil-DNA glycosylase [Vulcanisaeta moutnovskia 768-28]
 gi|323707093|gb|ADY00580.1| predicted Uracil-DNA glycosylase [Vulcanisaeta moutnovskia 768-28]
          Length = 214

 Score =  171 bits (434), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 6/192 (3%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
               EL  L+ S   C L +T    +         +MIIG  P + ++  G+PF G  G 
Sbjct: 11  ADYDELVQLMLSCTKCDLHTTRKRVVPGEGPLNARIMIIGEAPGEKEDEEGRPFVGAAGQ 70

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           +L K+L ++ I R +++I+ I    PPGNR+    E+E C+P ++ QI +I P++++ +G
Sbjct: 71  LLTKLLSNVGIRREEVYITNIVKCRPPGNRDPEPNEIEACKPYLITQIFMIKPQVIICLG 130

Query: 195 NKTKNFFFNNDAQK------TYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW 248
             +                      GK  N+      +  L T HP   +  P ++    
Sbjct: 131 RHSAREILVMAGYPEKSVSNISSIRGKVFNVRLGDLNVKVLPTYHPAAALYNPKLRGVIE 190

Query: 249 HALITLKKALKN 260
             L  ++  +  
Sbjct: 191 DDLRKIRAIINK 202


>gi|312621954|ref|YP_004023567.1| phage SPO1 DNA polymerase-like protein [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202421|gb|ADQ45748.1| phage SPO1 DNA polymerase-related protein [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 185

 Score =  171 bits (434), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 52/187 (27%), Positives = 89/187 (47%), Gaps = 6/187 (3%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           +  EL+S       C +     + +     +   L+ +G  P + ++  GKPF G+ G  
Sbjct: 3   TWEELESACLLCEKCPISKNRTNVVVGDGNKNAKLVFVGEAPGEEEDKQGKPFVGRAGKF 62

Query: 136 LDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           LD  L S+E+ R    +I  I    PP NR  + +E + C P +  QI+LISPKI++ +G
Sbjct: 63  LDLALTSLELSREKDFYICNILKCRPPNNRVPTEVEAQNCLPFLRAQIKLISPKIIVCLG 122

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
                +    D  K  Q+ GKW            +AT HP  L++ P  +++ +  L ++
Sbjct: 123 ATAMKYILGKDL-KITQDRGKWFE----KGGFWIMATYHPAALLRDPGKREDFYRDLKSV 177

Query: 255 KKALKNL 261
           K+ L+ +
Sbjct: 178 KERLEKI 184


>gi|295111555|emb|CBL28305.1| uracil-DNA glycosylase, family 4 [Synergistetes bacterium SGP1]
          Length = 207

 Score =  171 bits (433), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 43/196 (21%), Positives = 80/196 (40%), Gaps = 10/196 (5%)

Query: 71  AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130
           A    +  +L+  + +   C LC    +T+         ++++G  P   ++  G  F G
Sbjct: 8   AAWEAAWEDLRGRVAACRRCGLCEARTNTVFGQGAVRTPIVMVGEGPGADEDAQGLAFVG 67

Query: 131 KTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
           + G +L K+L +  I R  + I+ +    PP NR  +  EM  C   +  Q+ L+ P+IL
Sbjct: 68  RAGQLLTKILSAAGIDRESVFITNVVKCRPPNNRTPTQEEMLKCADFLEAQLLLLRPRIL 127

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KK 245
           + +GN    +     ++      G+W +       +      HP  L++         K 
Sbjct: 128 VCLGNTPLKWLL-RTSEGITALRGRWFDW----RGVQLFPMFHPSYLLRNDSRQKGSPKD 182

Query: 246 NTWHALITLKKALKNL 261
            TW  +  LK  L  +
Sbjct: 183 LTWQDVQNLKARLDEI 198


>gi|325294639|ref|YP_004281153.1| phage SPO1 DNA polymerase-related protein [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065087|gb|ADY73094.1| phage SPO1 DNA polymerase-related protein [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 222

 Score =  171 bits (433), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 6/183 (3%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
             L +LK  + +   C LC T  + +        +LM IG  P + +++ G+PF G+ G 
Sbjct: 38  KELEKLKEEVLNCCKCRLCKTRTNVVFGEGDTTTNLMFIGEAPGEQEDLQGRPFVGRAGQ 97

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           +L + L    I R +I I+ +    PPGNRN +  E++ C P + +QIE+I PK++L +G
Sbjct: 98  LLTRFLNLYGISRDKIFITNVVKCRPPGNRNPAQDEIKSCYPFLEKQIEIIKPKVILCLG 157

Query: 195 NKTKNFFFN-NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL-I 252
                   N  +     +  GK          I  + T HP  L++    +      L +
Sbjct: 158 AFAARTILNLPEKTPISRIRGK----EQKLGEIVVIPTFHPAYLLRNRKGEPEFQKDLEL 213

Query: 253 TLK 255
            L+
Sbjct: 214 ALR 216


>gi|220929817|ref|YP_002506726.1| phage SPO1 DNA polymerase-related protein [Clostridium
           cellulolyticum H10]
 gi|220000145|gb|ACL76746.1| phage SPO1 DNA polymerase-related protein [Clostridium
           cellulolyticum H10]
          Length = 190

 Score =  171 bits (433), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 46/186 (24%), Positives = 84/186 (45%), Gaps = 5/186 (2%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           +  +L S   +  +C L  T  + +         +M IG  P + +++ G PF G  G +
Sbjct: 3   NWEQLNSTCNNCRNCDLAGTRTNIVIGRGNPNAPIMFIGEGPGEQEDLRGLPFVGPAGQL 62

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           LD +L++++    + +I+ +    PP NR  +  E E C P +  Q+ LI P+I++ +G+
Sbjct: 63  LDTLLEALKFKPDEYYIANVVKCRPPNNRVPNEEEAEKCLPYLRNQVALIRPRIIVCLGS 122

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
               +    DA K  Q  G W            + T HP  L++    K+  +  +  +K
Sbjct: 123 TAAKYIVARDA-KITQIRGHW----IQRKKFWIMPTFHPAALLRDQSKKELLFKDIKEVK 177

Query: 256 KALKNL 261
           K +  L
Sbjct: 178 KKINQL 183


>gi|145592499|ref|YP_001154501.1| phage SPO1 DNA polymerase-related protein [Pyrobaculum arsenaticum
           DSM 13514]
 gi|145284267|gb|ABP51849.1| phage SPO1 DNA polymerase-related protein [Pyrobaculum arsenaticum
           DSM 13514]
          Length = 192

 Score =  171 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 42/179 (23%), Positives = 82/179 (45%), Gaps = 3/179 (1%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           +L EL  ++++   C L  T  + +         +MI+G  P  S++  G+PF G  G +
Sbjct: 2   TLEELHEVIKNCTRCPLHKTRRNAVPGEGDIKLGIMIVGEAPGASEDEVGRPFVGAAGQL 61

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           L K L  + I R  ++I+ +    PPGNR  +  E+E C P +++QI ++ PK ++ +G 
Sbjct: 62  LTKALAELGIQRGDVYITNVVKCRPPGNRPPAREEVEACLPYLLKQISILKPKRVVALGA 121

Query: 196 KTKNFFFNNDAQKTYQ---NLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
            +         ++  +     GK          +    T HP  +++ P + ++    +
Sbjct: 122 VSAKTLLGLVGKEVEKVGDVRGKCYPGKIAGVQLEICVTYHPAAILRNPRLGEDFRRDI 180


>gi|119383192|ref|YP_914248.1| phage SPO1 DNA polymerase-related protein [Paracoccus denitrificans
           PD1222]
 gi|119372959|gb|ABL68552.1| phage SPO1 DNA polymerase-related protein [Paracoccus denitrificans
           PD1222]
          Length = 271

 Score =  171 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 70/276 (25%), Positives = 118/276 (42%), Gaps = 23/276 (8%)

Query: 1   MTSKRI-----LSQEQILTIALFYADSGVYW-VFDEPNNEATYE-----SQRKEKSIDSA 49
           MT+        L  E  L +  + A+ G      D P +          S     +   A
Sbjct: 1   MTADPTYRGFALDAETALALLQWQAELGADEPCLDAPLDRYAMPDRAEPSPAPATAAPQA 60

Query: 50  IQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD 109
             P + +R     LV +A+++A  A +L EL +   +F    L   + +           
Sbjct: 61  ANPRSPVRDEAEDLVARAEAMATAATTLAELAAAQEAFDGIELKKGARNFCFCDGNPAAR 120

Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI------HISMISPWHPPGN 163
           +MIIG  P + ++  G+PF G+ G +LD+M  +I + R  +      +I+ +  W PPGN
Sbjct: 121 IMIIGEAPGEEEDRQGRPFVGRAGQLLDQMFGAIGLSREAVDAERALYITNVLTWRPPGN 180

Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH 223
           R     E+ +  P + R +EL  P++L+ +GN       N       +  GKW+      
Sbjct: 181 RRPEPAEIAMMLPFLTRHVELAQPQLLVLMGNTPCIAALNQQG--ILKLRGKWTTAF--- 235

Query: 224 SIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
             +P L   HP  L++ PL K+  W  L++L   L+
Sbjct: 236 -GLPALPMAHPAYLLRTPLAKREAWADLLSLSARLE 270


>gi|331270600|ref|YP_004397092.1| uracil-DNA glycosylase [Clostridium botulinum BKT015925]
 gi|329127150|gb|AEB77095.1| uracil-DNA glycosylase [Clostridium botulinum BKT015925]
          Length = 185

 Score =  171 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 6/186 (3%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             +L    R+   C+L    ++ +         LM IG  P   ++ +G+PF G+ G +L
Sbjct: 4   WKDLYKECRACSKCNLGEVKINMVFGEGNPKAKLMFIGEAPGADEDRTGRPFVGRAGQLL 63

Query: 137 DKMLQSIEIMRT-QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
            K L ++ + R    +I+ I    P  NRN    E   C P +  Q+ LI PKI++ +G 
Sbjct: 64  TKGLLALNLHRDKDYYITNICKCRPENNRNPMEDEAYACIPYLRNQVGLIKPKIIVCLGA 123

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
               +  N    K  ++ GKW N       I  +   HP  +++    K   W  L  +K
Sbjct: 124 IAGKYIIN-SGLKITRDRGKWIN----KKGIYIMPIFHPAAILRDDSKKALFWRDLKEIK 178

Query: 256 KALKNL 261
           K    +
Sbjct: 179 KKFDEI 184


>gi|300865821|ref|ZP_07110571.1| phage SPO1 DNA polymerase-related protein [Oscillatoria sp. PCC
           6506]
 gi|300336187|emb|CBN55726.1| phage SPO1 DNA polymerase-related protein [Oscillatoria sp. PCC
           6506]
          Length = 229

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 45/214 (21%), Positives = 86/214 (40%), Gaps = 11/214 (5%)

Query: 54  TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113
            +++    P   +         ++ ++       H C L     + +         +MII
Sbjct: 17  ASLQRDSIPNDAKIPIPPGTYETMEQIAEHCNRCHRCELGKNRQNAVIGRGNLQAPIMII 76

Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIE-IMRTQIHISMISPWHPPGNRNLSNIEME 172
           G  P  +++ +G PF G++G +LDK+L+S+       + I  ++   PP NR  +  E +
Sbjct: 77  GEAPGQNEDETGLPFVGRSGQLLDKILESVGLSTERDVFICNVNKCRPPDNRTPTPKERD 136

Query: 173 ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATV 232
            C+P ++ QI +++P+I+L  G            Q   +  G+W            +A  
Sbjct: 137 ACKPYLLEQIRIVNPQIILLTGATALKGLTGEK-QAISKIRGQWIEWE----GRQCMAIF 191

Query: 233 HPQELIQYPLI-----KKNTWHALITLKKALKNL 261
           HP  L++ P       K   W  +  +K     L
Sbjct: 192 HPSYLLRNPSREPGSPKWLMWQDIQIVKAKFDEL 225


>gi|189219157|ref|YP_001939798.1| Uracil-DNA glycosylase [Methylacidiphilum infernorum V4]
 gi|189186015|gb|ACD83200.1| Uracil-DNA glycosylase [Methylacidiphilum infernorum V4]
          Length = 276

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 13/193 (6%)

Query: 75  CSLHELKSLLRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
             L  LK  + +  +C  L S    T+  T     +LM +G  P   +++ G+PF G  G
Sbjct: 74  KELSLLKEKVEACRNCPHLVSFRTQTVFGTGNPYAELMFVGEAPGAEEDLQGEPFVGPAG 133

Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPP------GNRNLSNIEMEICRPIIMRQIELISP 187
            +L KM++++ + R Q++I+ +    P       GNR  +  EM  C P ++ Q++LI+P
Sbjct: 134 QLLTKMIRAMGLSREQVYIANVLKCRPDIPKGQKGNRKPTTEEMSTCLPYLLSQLKLINP 193

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL--IKK 245
           K+++ +G             K  +  G+  +          + T HP  L+  P    K+
Sbjct: 194 KVIVALGATAYEGLTGKVGIKISEVRGRCFSFN----GATLIPTYHPSFLLHNPSLTNKR 249

Query: 246 NTWHALITLKKAL 258
             W  L+T    L
Sbjct: 250 KVWEDLLTAMGKL 262


>gi|14591260|ref|NP_143337.1| hypothetical protein PH1472 [Pyrococcus horikoshii OT3]
 gi|3257896|dbj|BAA30579.1| 197aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 197

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 44/195 (22%), Positives = 89/195 (45%), Gaps = 3/195 (1%)

Query: 69  SIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128
           S+  K   + +L+  +R    C L     + +    +    +M +G  P   ++  G PF
Sbjct: 3   SVPSKEELMKKLEEKIRKCKKCPLWEVRTNPVPGDGSYDTKIMFVGEAPGYWEDQMGLPF 62

Query: 129 SGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188
            GK G +LD++L+ I + R++++I+ I    PP NR+ +  E++ C P +  QI++I PK
Sbjct: 63  VGKAGKVLDELLKLIGLKRSEVYITNIVKCRPPNNRDPTEEEIKACAPYLDAQIDIIKPK 122

Query: 189 ILLFIGNKTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK 245
           +++ +G  +  +       + +   +  G+     T    I  +   HP   +  P +++
Sbjct: 123 VIVTLGRFSTAYIMKKYGFNVEPISKIHGRVFEARTLFGKIYIVPMYHPAVALYRPQLRR 182

Query: 246 NTWHALITLKKALKN 260
                   LK  L +
Sbjct: 183 ELEEDFKKLKSLLSS 197


>gi|157363942|ref|YP_001470709.1| phage SPO1 DNA polymerase-related protein [Thermotoga lettingae
           TMO]
 gi|157314546|gb|ABV33645.1| phage SPO1 DNA polymerase-related protein [Thermotoga lettingae
           TMO]
          Length = 194

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 43/185 (23%), Positives = 79/185 (42%), Gaps = 9/185 (4%)

Query: 81  KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML 140
            S +     C L +T  + +         +M +G  P + ++ +G+PF G+ G +L K+L
Sbjct: 11  ASRIEKCTSCPLFNTRTNVVVGEGNLYAPIMFVGEGPGEEEDKTGRPFVGRAGQLLTKIL 70

Query: 141 QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF 200
           +S+ I R  ++I  I    PP NR     E + C   +M QI ++ P I++ +G+   +F
Sbjct: 71  ESVNIDREDVYICNIVKCRPPENRVPKAEEQKACGHYLMAQIMIVDPAIIVPLGSTALSF 130

Query: 201 FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWHALITLK 255
           F   +     +  GK  +              HP  L++ P       K  TW  +  ++
Sbjct: 131 FLGQN-VSITEFRGKELDWKAGK---KLFPMFHPSYLLRNPSKAKGSPKDLTWQDIKKVR 186

Query: 256 KALKN 260
           +    
Sbjct: 187 EFFDQ 191


>gi|255527794|ref|ZP_05394645.1| phage SPO1 DNA polymerase-related protein [Clostridium
           carboxidivorans P7]
 gi|255508507|gb|EET84896.1| phage SPO1 DNA polymerase-related protein [Clostridium
           carboxidivorans P7]
          Length = 190

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 45/186 (24%), Positives = 77/186 (41%), Gaps = 6/186 (3%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             EL       + C L +   + +         ++ +G  P   ++  G PF G+ G +L
Sbjct: 4   WRELYEECLQCNKCDLGNKRTNMVFGDGNSRGKIVFVGEAPGADEDRIGLPFVGRAGQLL 63

Query: 137 DKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
            K L +++++R    +I  +    P  NR     E E C P +  Q+ LI PKI++ +G 
Sbjct: 64  TKGLTALDLIRENDYYICNVCKCRPDNNRVPYENEAEACLPYLRNQVALIKPKIIVCLGA 123

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
               +   ND  +  ++ GKW            +AT HP  L +    K   W  L ++K
Sbjct: 124 TAMKYILGND-FRITRDRGKWIE----RKGCYIIATFHPAALFRDENKKVLFWEDLKSVK 178

Query: 256 KALKNL 261
           K    +
Sbjct: 179 KKYDEI 184


>gi|160931927|ref|ZP_02079320.1| hypothetical protein CLOLEP_00759 [Clostridium leptum DSM 753]
 gi|156869264|gb|EDO62636.1| hypothetical protein CLOLEP_00759 [Clostridium leptum DSM 753]
          Length = 193

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 6/188 (3%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            + + L+      H C LC    + +     E  ++M IG  P +++++ G+PF G+ G 
Sbjct: 3   ETWNSLQEACLQCHKCGLCEGRHNVVFGIGVETAEVMFIGEGPGENEDLQGEPFVGRGGQ 62

Query: 135 MLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
           +LDKML ++++ R +  +I+ I    PP NR+    E E C   +  Q  LI PKI++ +
Sbjct: 63  LLDKMLAAVDLSREKNIYIANIVKCRPPQNRDPLPEEQEACIDWLRNQTALIRPKIIVCL 122

Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253
           G          D + T     K   +    + +  +AT+HP  L++ P  K   +   + 
Sbjct: 123 GRIAAAKIIKPDIKIT-----KEHGVFFEKNGVVMMATLHPAALLRNPSQKPGAFDDFLK 177

Query: 254 LKKALKNL 261
           L++ +  L
Sbjct: 178 LREKIHEL 185


>gi|254252036|ref|ZP_04945354.1| hypothetical protein BDAG_01247 [Burkholderia dolosa AUO158]
 gi|124894645|gb|EAY68525.1| hypothetical protein BDAG_01247 [Burkholderia dolosa AUO158]
          Length = 348

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 55/250 (22%), Positives = 91/250 (36%), Gaps = 23/250 (9%)

Query: 29  DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSP-----------------LVQQADSIA 71
           D P   A   +      +       T                            ++    
Sbjct: 92  DAPRVAANDPADSDRAPVLRDPPASTPQTPPTPDDDFAWFDAAPPSAAVPAAAPRSAETP 151

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
             A     L + +     C LC    +T+        D M+IG  P ++++  G+PF G+
Sbjct: 152 VAALDWDALAARVADCTRCRLCEKRTNTVFGVGDRDADWMLIGEAPGENEDKQGEPFVGQ 211

Query: 132 TGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
            G +LD MLQS+ + R   + I+ +    PPGNRN    E+  C P + RQ+ L+ PK++
Sbjct: 212 AGKLLDNMLQSLSLRRGDNVFIANVIKCRPPGNRNPEPDEVARCEPYLQRQVALVKPKLI 271

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
           + +G          DA       G+          +P + T HP  L++    K   W  
Sbjct: 272 VALGRFAAQTLLKTDASIAS-LRGRVHAYE----GVPVIVTYHPAYLLRSLPDKAKAWAD 326

Query: 251 LITLKKALKN 260
           L   +   +N
Sbjct: 327 LCLARDTFRN 336


>gi|312143585|ref|YP_003995031.1| phage SPO1 DNA polymerase-related protein [Halanaerobium sp.
           'sapolanicus']
 gi|311904236|gb|ADQ14677.1| phage SPO1 DNA polymerase-related protein [Halanaerobium sp.
           'sapolanicus']
          Length = 210

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 54/184 (29%), Positives = 90/184 (48%), Gaps = 5/184 (2%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            +LK        C L     + +         +M+IG  P  +++   +PF G+ G ++D
Sbjct: 23  QKLKEKALKCTRCQLREGCSNVVMGEGNLDNKIMLIGEGPGATEDRMARPFVGRAGKLMD 82

Query: 138 KMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197
           K+LQS+ + R +I+I+ +    PP NR     E++ C  I+  +IELI PK+++ +G+  
Sbjct: 83  KILQSVNLKRDEIYITNVVKCRPPDNRVPYKKEVKACSAILKAEIELIEPKVVVTLGSTA 142

Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKA 257
            NF  N +     +  GKW         I  LAT HP  L++   +KK +WH    +KKA
Sbjct: 143 TNFLLNPE-DSITKMRGKW----LKRGDIYFLATFHPAYLLRNENMKKYSWHDFKLIKKA 197

Query: 258 LKNL 261
              +
Sbjct: 198 ADRI 201


>gi|189485553|ref|YP_001956494.1| uracil-DNA glycosylase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287512|dbj|BAG14033.1| uracil-DNA glycosylase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 253

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 15/202 (7%)

Query: 68  DSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127
             I+     L EL+  +     C L    L+ +    +   DL+ +G  P   ++  GKP
Sbjct: 53  AEISSSGEELGELREKVSFCKKCPLGEKRLNAVFGCGSPDADLVFVGEGPGYDEDHIGKP 112

Query: 128 FSGKTGNMLDKMLQSIEIMRTQIHISMISPWH----------PPGNRNLSNIEMEICRPI 177
           F G+ G +L K+++++   R  ++I+ I   H             +R  +  EMEICRP 
Sbjct: 113 FVGRAGQLLTKIIEAMGQARESVYIANIVKCHAMIDPSNPEKRSNDRPPTLEEMEICRPY 172

Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237
           +  Q+E+I PKI++ +G  +     N   +   +  G           I  + T HP  L
Sbjct: 173 LDMQLEIIKPKIIVTLGASSTKGLLN-SIESISRIRGSVREY----KGIKLIPTFHPAAL 227

Query: 238 IQYPLIKKNTWHALITLKKALK 259
           ++   +KK  W  +  +   L 
Sbjct: 228 LRNQDLKKFVWEDMKKVMHYLD 249


>gi|220931987|ref|YP_002508895.1| Uracil-DNA glycosylase [Halothermothrix orenii H 168]
 gi|219993297|gb|ACL69900.1| Uracil-DNA glycosylase [Halothermothrix orenii H 168]
          Length = 210

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 50/185 (27%), Positives = 81/185 (43%), Gaps = 8/185 (4%)

Query: 80  LKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKM 139
           LK        C L       +       + +M +G  P   ++  GKPF GK G +L K+
Sbjct: 25  LKEKALKCDRCQLRQGCTQVVMGYGPIDRKIMFVGEGPGADEDRLGKPFVGKAGKLLTKI 84

Query: 140 LQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199
           L S+ + R  ++I+ I    PP NR  +  E E C PI+  +I+LI P +++ +G+    
Sbjct: 85  LNSVGLEREDVYITNIVKCRPPNNRQPTRSEAEACSPILKAEIKLIDPLVIVPLGSVALK 144

Query: 200 FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK--- 256
              +  A    +  GKW  +           T HP  L++ P +KK  W     ++K   
Sbjct: 145 NLVDEKASIM-RTRGKWKKI----GKYYFFPTFHPAFLLRNPKMKKLVWRDFKVIRKAVD 199

Query: 257 ALKNL 261
            +K L
Sbjct: 200 RIKEL 204


>gi|253680837|ref|ZP_04861640.1| uracil-DNA glycosylase [Clostridium botulinum D str. 1873]
 gi|253562686|gb|EES92132.1| uracil-DNA glycosylase [Clostridium botulinum D str. 1873]
          Length = 185

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 6/186 (3%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             +L    +    C+L +  ++ +         LM IG  P   ++ +G+PF G+ G +L
Sbjct: 4   WKDLYKKCKDCSKCNLSNGKINMVFGEGNPKAKLMFIGEAPGADEDKTGRPFVGRAGQLL 63

Query: 137 DKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
            K L ++ + R    +I+ I    P  NRN    E   C P +  Q+ LI PKI++ +G 
Sbjct: 64  TKGLLALNLHREQDYYITNICKCRPENNRNPMEHEACACIPYLRNQVALIKPKIIICLGA 123

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
               +  N++  +  ++ GKW         I  +   HP  +++    K   W  L  +K
Sbjct: 124 IAGKYIINSNL-RITRDRGKWIE----KKGIYIMPIFHPAAILRDNSKKSLFWRDLKEIK 178

Query: 256 KALKNL 261
           +    +
Sbjct: 179 RKFDEI 184


>gi|14520900|ref|NP_126375.1| hypothetical protein PAB0474 [Pyrococcus abyssi GE5]
 gi|5458117|emb|CAB49606.1| Thermostable uracil-DNA glycosylase [Pyrococcus abyssi GE5]
          Length = 196

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 44/195 (22%), Positives = 89/195 (45%), Gaps = 3/195 (1%)

Query: 70  IAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129
           +A K   + +L+  +R+   C L     + +    +    +M +G  P   ++  G PF 
Sbjct: 1   MASKEELMKKLEEKIRNCKKCPLWQLRTNPVPGDGSYDAKVMFVGEAPGYWEDQQGLPFV 60

Query: 130 GKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189
           GK G +LD++L+ I + R +++I+ I    PP NR+ +  E++ C P +  QI++I P+I
Sbjct: 61  GKAGKVLDELLKGIGLNRREVYITNIVKCRPPNNRDPTEEEIKACAPYLDAQIDIIRPRI 120

Query: 190 LLFIGNKTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKN 246
           ++ +G  +  +         +   +  GK     T    +  +   HP   +  P ++K 
Sbjct: 121 IVTLGRFSMGYILRKYGFQVEPISKIHGKVFEARTLFGKVYIVPMYHPAVALYRPQLRKE 180

Query: 247 TWHALITLKKALKNL 261
                  LK  ++ +
Sbjct: 181 LEEDFRKLKDLIEKV 195


>gi|114798144|ref|YP_760609.1| uracil-DNA glycosylase [Hyphomonas neptunium ATCC 15444]
 gi|114738318|gb|ABI76443.1| uracil-DNA glycosylase, family 4 [Hyphomonas neptunium ATCC 15444]
          Length = 246

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 62/223 (27%), Positives = 108/223 (48%), Gaps = 4/223 (1%)

Query: 41  RKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI 100
            + ++++ A       R + +  V++A++IA    +L EL +    F    L ++  +T+
Sbjct: 25  EQAQALEPAPLRKRGARTV-ADWVREAETIAAGCANLDELTAAAGQFSGSPLRASCENTV 83

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH-ISMISPWH 159
               T G  L++IG  P   ++  GKPF GK G +LDKML +I   R +   I+ ++ W 
Sbjct: 84  VYDGTPGASLLVIGEGPGAQEDRQGKPFVGKAGQLLDKMLAAIGRNRAENALITNVNYWR 143

Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
           PPGNR+    E+ +CRP + R IE+  P++++  G         +      +  G     
Sbjct: 144 PPGNRSPEADELAVCRPFVDRFIEVSRPRLIVAAGGIPAVSLLGSREGIM-KLRGNEYCY 202

Query: 220 CTPHS-IIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
            TP    +P +  +HP  L++ P  K   W  L+ ++K L  L
Sbjct: 203 TTPGGYRVPLIPMLHPAYLLRRPQDKSRAWRDLLLIEKRLGEL 245


>gi|87302163|ref|ZP_01084988.1| hypothetical protein WH5701_08179 [Synechococcus sp. WH 5701]
 gi|87283088|gb|EAQ75044.1| hypothetical protein WH5701_08179 [Synechococcus sp. WH 5701]
          Length = 218

 Score =  169 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 50/206 (24%), Positives = 81/206 (39%), Gaps = 11/206 (5%)

Query: 62  PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121
                  + A +  +L +L         C L       + +       LM+IG  P   +
Sbjct: 4   DPGTAGQATALREGALQQLAGGCAECRRCSLADGRQQVVVSRGDPHAALMVIGEGPGAQE 63

Query: 122 NISGKPFSGKTGNMLDKMLQSIEIM-RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180
           + SG PF G+ G +LD+ML S+ I      +I  +    PP NR  +  EM  C P +++
Sbjct: 64  DASGSPFVGRAGQLLDRMLASVGIDSNRDAYICNVVKCRPPENRKPTPQEMAACLPWLLQ 123

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
           Q+EL+ P+++L  G                +  G+W            L   HP  L++ 
Sbjct: 124 QVELVQPQVVLLAGATAVEGVLGIKG-GITRLRGQWRTWQGRW----CLPIFHPSYLLRN 178

Query: 241 PLI-----KKNTWHALITLKKALKNL 261
           P       K +TW  L  ++  L  L
Sbjct: 179 PSREPETPKWHTWQDLKAVRSRLDQL 204


>gi|78066821|ref|YP_369590.1| Phage SPO1 DNA polymerase-related protein [Burkholderia sp. 383]
 gi|77967566|gb|ABB08946.1| Phage SPO1 DNA polymerase-related protein [Burkholderia sp. 383]
          Length = 336

 Score =  169 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 53/233 (22%), Positives = 93/233 (39%), Gaps = 20/233 (8%)

Query: 25  YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLL 84
                 P++ A +++            P+   R + +P+                    +
Sbjct: 107 DMPPAGPDDFAWFDAAPP-----GDPVPVAESRPVGTPVAALDWDALAA---------RV 152

Query: 85  RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIE 144
                C LC    +T+        D M+IG  P ++++  G+PF G+ G +LD MLQS+ 
Sbjct: 153 SDCTLCRLCEKRTNTVFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLLDNMLQSLS 212

Query: 145 IMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
           + R   ++I+ +    PPGNRN    E+  C P + RQ+ L+ PK+++ +G         
Sbjct: 213 LKRGDNVYIANVIKCRPPGNRNPEPDEVASCEPYLQRQVALVKPKLIVALGRFAAQTLLK 272

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
            DA       G+          +P + T HP  L++    K   W  L   + 
Sbjct: 273 TDASIAS-LRGRVHAYE----GVPVIVTYHPAYLLRSLQDKSKAWADLCLARD 320


>gi|254293439|ref|YP_003059462.1| phage SPO1 DNA polymerase-related protein [Hirschia baltica ATCC
           49814]
 gi|254041970|gb|ACT58765.1| phage SPO1 DNA polymerase-related protein [Hirschia baltica ATCC
           49814]
          Length = 268

 Score =  169 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 72/264 (27%), Positives = 116/264 (43%), Gaps = 13/264 (4%)

Query: 8   SQEQIL--TIALFYADSGVYWVFDEPNNEA-----TYESQRKEKSIDSAIQPITNIRHIH 60
           S E++   ++  ++ D+GV    D+P +       T  ++       +        R + 
Sbjct: 4   SPEELALKSLHEWWIDAGV--PPDQPISLKKKTAPTAATKTPAPISKAEKSAPAQPRRLR 61

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120
           +  +  A  +A  A ++ +LK  +  F  C L +T+ ST+        D+MII   P   
Sbjct: 62  TDQILAAQKLADHALTIEDLKKSVNDFTGCDLRTTARSTVLCDGNINADMMIICGAPDRE 121

Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIM 179
           ++ SG+P +G  G +LDKM  +I   R    +I+ + PWH  G RN  + E  ICRP + 
Sbjct: 122 EDKSGRPAAGANGQLLDKMFAAINFTRQDNLYIASLMPWHMLGERNPDDQEWAICRPFLQ 181

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP--HSIIPTLATVHPQEL 237
           RQIEL+SPKI++ IG  +     N       +  G+            IP      P  L
Sbjct: 182 RQIELVSPKIIVTIGKMSSQILLN-KTDNIAKLRGQEFQYKQESLSQEIPCFPLFAPSYL 240

Query: 238 IQYPLIKKNTWHALITLKKALKNL 261
              P  K  TW  L  ++K  + L
Sbjct: 241 RVRPAEKAKTWKDLQLIRKRAEQL 264


>gi|298492683|ref|YP_003722860.1| phage SPO1 DNA polymerase-like protein ['Nostoc azollae' 0708]
 gi|298234601|gb|ADI65737.1| phage SPO1 DNA polymerase-related protein ['Nostoc azollae' 0708]
          Length = 226

 Score =  169 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 49/206 (23%), Positives = 82/206 (39%), Gaps = 11/206 (5%)

Query: 62  PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121
           P   +    +    ++ EL     +   C L       +         +MIIG  P  S+
Sbjct: 22  PTDAKIPIPSGTYANMPELAQHCNNCRRCGLGDNRTHAVVGRGNLQAKIMIIGEAPGQSE 81

Query: 122 NISGKPFSGKTGNMLDKMLQSIE-IMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180
           + +G PF GK+G +L+K+L S+       ++I  I+   PP NR  +  EM  C+P ++ 
Sbjct: 82  DETGLPFVGKSGQLLEKILASVNLSTEEDVYIGNINKCRPPENRVPTAEEMAACKPYLLE 141

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
           QI L+ PKI+L  G         +  Q   +  G+W            +   HP  L++ 
Sbjct: 142 QIRLVDPKIILLTGATAVKGITGSK-QGITKIRGQWLESE----GRLCMPIFHPSYLLRN 196

Query: 241 PLI-----KKNTWHALITLKKALKNL 261
           P       K   W  +  +K     +
Sbjct: 197 PSREKGSPKWLMWQDIQAVKAKYDEI 222


>gi|167646129|ref|YP_001683792.1| phage SPO1 DNA polymerase-like protein [Caulobacter sp. K31]
 gi|167348559|gb|ABZ71294.1| phage SPO1 DNA polymerase-related protein [Caulobacter sp. K31]
          Length = 272

 Score =  169 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 113/264 (42%), Gaps = 13/264 (4%)

Query: 7   LSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPITNIRHIH----- 60
           +    + ++  F+AD+GV   + D+P +     +       + A   +  +         
Sbjct: 5   VDPRAVESLLAFWADAGVEASYADDPIDRLAQGAAMLRARKEPAPVAVAPVVTPVLGRGP 64

Query: 61  --SPLVQQADSIAQKACSLHELKSLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTP 117
                + +A ++A     L  L + + +F  C L    +   + +       LMIIG  P
Sbjct: 65  DLGAAIAEAKALAAACADLPALAAAIAAFDGCPLKTQGARQAVVSRGPADAPLMIIGEAP 124

Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177
              +++ G PF G+ G +LD+ML++  +   +  ++    W PPGNR  +  E  +C P 
Sbjct: 125 GADEDLQGAPFVGRAGQLLDRMLKAAGL-LDRAFVTNTVFWRPPGNRTPTPQEQAVCAPF 183

Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS--IIPTLATVHPQ 235
           + R I L+ PKILL +G  +       D        G+W    +      +P L T+HP 
Sbjct: 184 LERAIALVQPKILLLVGGASAKSLLRRDEGILS-LRGRWFEWTSSDGQNELPALPTLHPA 242

Query: 236 ELIQYPLIKKNTWHALITLKKALK 259
            L++ P  KK  W  ++ L + L 
Sbjct: 243 FLLRQPAAKKKAWTDMLMLSERLD 266


>gi|296535656|ref|ZP_06897832.1| uracil-DNA glycosylase [Roseomonas cervicalis ATCC 49957]
 gi|296264007|gb|EFH10456.1| uracil-DNA glycosylase [Roseomonas cervicalis ATCC 49957]
          Length = 287

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 60/241 (24%), Positives = 106/241 (43%), Gaps = 15/241 (6%)

Query: 25  YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLL 84
                 P             ++  A  P  +I    + L   A  +A     + +++S  
Sbjct: 46  DVAPGAPMLPDAAAVIAACDALYIAAPPAAHIPLARAALAAAAPDLAALRAVIEQIES-- 103

Query: 85  RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIE 144
                  L  T+ + + A  +    LM+IG  P   ++  GKPF G +G +LD+ML SI 
Sbjct: 104 ------PLRDTATNLVFADGSPESGLMLIGEAPGGDEDRQGKPFVGVSGQLLDRMLASIG 157

Query: 145 IMR------TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTK 198
           + R         +I+ I PW PPGNR  ++ E+ +  P+++R I L+ P+ ++ +G    
Sbjct: 158 LDRGQAAPGQGFYITNILPWRPPGNRTPTDAEIALFLPVVLRHIALVRPRHVVLLGGTAA 217

Query: 199 NFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
                   +   +  G+W +L      +P L T+HP  L++ P  K+  W  L+ L++ L
Sbjct: 218 KALLRAK-EGITRLRGRWHDLPQEAGGLPALPTLHPAYLLRNPAAKREAWADLLMLRRTL 276

Query: 259 K 259
            
Sbjct: 277 D 277


>gi|227826496|ref|YP_002828275.1| phage SPO1 DNA polymerase-related protein [Sulfolobus islandicus
           M.14.25]
 gi|229583658|ref|YP_002842159.1| phage SPO1 DNA polymerase-related protein [Sulfolobus islandicus
           M.16.27]
 gi|227458291|gb|ACP36977.1| phage SPO1 DNA polymerase-related protein [Sulfolobus islandicus
           M.14.25]
 gi|228018707|gb|ACP54114.1| phage SPO1 DNA polymerase-related protein [Sulfolobus islandicus
           M.16.27]
          Length = 216

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 4/190 (2%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            +L  +   +R    C L     + +        ++M IG  P ++++I GKPF G  G 
Sbjct: 2   DTLDLIAEEVRKCQKCRLWKYRKNAVPGEGNNKAEIMFIGEAPGENEDIEGKPFVGAAGK 61

Query: 135 MLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
           +L +++ + + + R  + I+ +    PP NR+    E+  C P + RQIELI P+I++ +
Sbjct: 62  LLTRLINEVLGLSRDDVFITNLVKCRPPNNRDPEEDEIIACSPYLHRQIELIRPRIIITL 121

Query: 194 GNKTKNFFFNNDAQKT---YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
           G  + ++ F     K     +  GK+         I    T HP   +  P I+K     
Sbjct: 122 GRHSTSYLFQIMNIKMESIGKVRGKFYTWNEYGYKILVFPTYHPAAALYNPPIRKILEED 181

Query: 251 LITLKKALKN 260
              +K+AL +
Sbjct: 182 FRKVKEALSS 191


>gi|227829105|ref|YP_002830884.1| phage SPO1 DNA polymerase-related protein [Sulfolobus islandicus
           L.S.2.15]
 gi|229577905|ref|YP_002836303.1| phage SPO1 DNA polymerase-related protein [Sulfolobus islandicus
           Y.G.57.14]
 gi|229580806|ref|YP_002839205.1| phage SPO1 DNA polymerase-related protein [Sulfolobus islandicus
           Y.N.15.51]
 gi|238618564|ref|YP_002913389.1| phage SPO1 DNA polymerase-related protein [Sulfolobus islandicus
           M.16.4]
 gi|284996491|ref|YP_003418258.1| phage SPO1 DNA polymerase-related protein [Sulfolobus islandicus
           L.D.8.5]
 gi|227455552|gb|ACP34239.1| phage SPO1 DNA polymerase-related protein [Sulfolobus islandicus
           L.S.2.15]
 gi|228008619|gb|ACP44381.1| phage SPO1 DNA polymerase-related protein [Sulfolobus islandicus
           Y.G.57.14]
 gi|228011522|gb|ACP47283.1| phage SPO1 DNA polymerase-related protein [Sulfolobus islandicus
           Y.N.15.51]
 gi|238379633|gb|ACR40721.1| phage SPO1 DNA polymerase-related protein [Sulfolobus islandicus
           M.16.4]
 gi|284444386|gb|ADB85888.1| phage SPO1 DNA polymerase-related protein [Sulfolobus islandicus
           L.D.8.5]
 gi|323473573|gb|ADX84179.1| phage SPO1 DNA polymerase-related protein [Sulfolobus islandicus
           REY15A]
 gi|323476220|gb|ADX81458.1| phage SPO1 DNA polymerase-related protein [Sulfolobus islandicus
           HVE10/4]
          Length = 216

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 4/190 (2%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            +L  +   +R    C L     + +        ++M IG  P ++++I GKPF G  G 
Sbjct: 2   DTLDLIAEEVRKCQKCRLWKYRKNAVPGEGNNKAEIMFIGEAPGENEDIEGKPFVGAAGK 61

Query: 135 MLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
           +L +++ + + + R  + I+ +    PP NR+    E+  C P + RQIELI P+I++ +
Sbjct: 62  LLTRLINEVLGLSRDDVFITNLVKCRPPNNRDPEEDEIIACSPYLHRQIELIRPRIIITL 121

Query: 194 GNKTKNFFFNNDAQKT---YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
           G  + ++ F     K     +  GK+         I    T HP   +  P I+K     
Sbjct: 122 GRHSTSYLFQIMNIKMESIGKVRGKFYTWNEYGYKILVFPTYHPAAALYNPPIRKILEED 181

Query: 251 LITLKKALKN 260
              +K+AL +
Sbjct: 182 FRKVKEALSS 191


>gi|254495599|ref|ZP_05108521.1| bacteriophage related DNA polymerase [Legionella drancourtii
           LLAP12]
 gi|254355169|gb|EET13782.1| bacteriophage related DNA polymerase [Legionella drancourtii
           LLAP12]
          Length = 198

 Score =  169 bits (427), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 54/184 (29%), Positives = 83/184 (45%), Gaps = 5/184 (2%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L  L   + +   C L  T   T+    +    LMIIG  P   ++  G PF GK G +L
Sbjct: 16  LSALAKEVAACTRCPLHQTRKQTVFFRGSPQAKLMIIGEAPGFYEDQQGLPFVGKAGGLL 75

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           ++MLQS+E+     +I+ +    PP NR+    E+  C   + RQIEL+ P ++L +G  
Sbjct: 76  NQMLQSVELFEQDFYIANVLKCRPPNNRDPQAAEIRQCSAYLSRQIELLQPSLILALGRF 135

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
              F  N       Q               P + + HP  L++ P  KK T+  L+ +KK
Sbjct: 136 AGQFLLN-KPLALKQLRNNVHYY----KNTPFIVSYHPAYLLRKPADKKKTYLDLLAVKK 190

Query: 257 ALKN 260
            L+ 
Sbjct: 191 FLQQ 194


>gi|74317741|ref|YP_315481.1| putative phage DNA polymerase [Thiobacillus denitrificans ATCC
           25259]
 gi|74057236|gb|AAZ97676.1| putative phage DNA polymerase [Thiobacillus denitrificans ATCC
           25259]
          Length = 213

 Score =  169 bits (427), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 53/205 (25%), Positives = 86/205 (41%), Gaps = 6/205 (2%)

Query: 58  HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117
                L   A       C   +L   +     C L +T    +        D +++G  P
Sbjct: 14  APAWRLRDTASEARAPVCGWEQLSDAVAHCTRCRLAATRTQGVLGVGDREADWLVVGEAP 73

Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRP 176
              ++  G+PF GK G +LD ML SI I R   ++I+ +    PPGNR+    E+  C P
Sbjct: 74  GADEDRLGEPFVGKAGKLLDAMLASIGIARGDNVYITNVLKSRPPGNRDPEADEVAACMP 133

Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236
            ++ QI+L+ PK++L +G          DA       G+  +       IP + T HP  
Sbjct: 134 YLLAQIDLVKPKLILALGRFAAQSLLATDAALGS-LRGRVHSFQN----IPLVVTYHPAY 188

Query: 237 LIQYPLIKKNTWHALITLKKALKNL 261
           L++    K   W  L   ++ ++ L
Sbjct: 189 LLRNLPDKARAWEDLCLARRTIQRL 213


>gi|315426239|dbj|BAJ47882.1| DNA polymerase bacteriophage-type [Candidatus Caldiarchaeum
           subterraneum]
 gi|315427880|dbj|BAJ49472.1| DNA polymerase bacteriophage-type [Candidatus Caldiarchaeum
           subterraneum]
          Length = 196

 Score =  169 bits (427), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 80/186 (43%), Gaps = 7/186 (3%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L  +   +R+   C L     + +        +LM IG  P + +++ G+PF G++G +L
Sbjct: 5   LDAIAEEVRACRLCPLWRGRRNAVPGEGNPRAELMFIGEGPGEEEDLQGRPFVGRSGRLL 64

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP-IIMRQIELISPKILLFIGN 195
            + L+   I R  + I+ +    PP NR  +  E + C    + RQIE ++P++++ +G+
Sbjct: 65  TEALEKAGIRREDVFITNVVKCRPPENREPTPEERQTCTNKYLFRQIETVNPRLIVLLGS 124

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
                     +       GK               T HP   +  P  ++N +  +   +
Sbjct: 125 VAVQTLLGISSV--TAVRGKAFE----KMGRRFFCTYHPAAALYNPGNRENFFSDIKKAR 178

Query: 256 KALKNL 261
           + L++L
Sbjct: 179 ELLESL 184


>gi|146297378|ref|YP_001181149.1| phage SPO1 DNA polymerase-related protein [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145410954|gb|ABP67958.1| phage SPO1 DNA polymerase-related protein [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 187

 Score =  169 bits (427), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 6/187 (3%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           +  EL+    S   C +     + +     +   LM IG  P + ++  GKPF G+ G +
Sbjct: 3   TWEELERSCLSCTKCPISKDRTNVVIGDGNKNAKLMFIGEAPGEEEDKQGKPFVGRAGKL 62

Query: 136 LDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           LD  L ++E+ R    +I  I    PP NR  +  E + C P +  Q++L+ PKI++ +G
Sbjct: 63  LDLALDALELSRENDFYICNILKCRPPNNRVPTEYEAQNCLPYLRAQVKLVQPKIIVCLG 122

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
                +    +  K  Q+ GKW            +AT HP  L++ P  +++ +  L ++
Sbjct: 123 ATAMKYILGRNL-KITQDRGKWF----QKGEFHIMATYHPAALLRDPSKREDFYRDLKSV 177

Query: 255 KKALKNL 261
           K+ LK +
Sbjct: 178 KEKLKEM 184


>gi|332709104|ref|ZP_08429072.1| uracil-DNA glycosylase, family 4 [Lyngbya majuscula 3L]
 gi|332352110|gb|EGJ31682.1| uracil-DNA glycosylase, family 4 [Lyngbya majuscula 3L]
          Length = 231

 Score =  168 bits (426), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 10/219 (4%)

Query: 49  AIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQ 108
                 N++    P   +    A    ++  L    +S   C L +T    +        
Sbjct: 16  TPSKPNNVQRDLIPTDAKIPIPAGTYDTMESLTEHCQSCQRCELGATRTKAVIGRGNPKA 75

Query: 109 DLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM-RTQIHISMISPWHPPGNRNLS 167
            +MIIG  P   ++ +G PF G+ G +L+K+L S++I     ++I  +    PPGNR  +
Sbjct: 76  LIMIIGEGPGKQEDETGMPFVGRAGKLLEKILASVKIDTEQDVYICNMVKCRPPGNRTPT 135

Query: 168 NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227
             E+E C+P ++ QI L+ P+I+LF G         N  Q   +  G W           
Sbjct: 136 PNEIEACKPYLLEQIRLVEPQIILFTGATAVKGLTGNK-QGITKIRGTWMEWEGHK---W 191

Query: 228 TLATVHPQELIQYP-----LIKKNTWHALITLKKALKNL 261
            +  +HP  L++ P       K   W  +  ++  L  +
Sbjct: 192 CMPILHPAYLLRNPKRDPGSPKWMMWQDIQKVRAKLDEI 230


>gi|312880146|ref|ZP_07739946.1| phage SPO1 DNA polymerase-related protein [Aminomonas paucivorans
           DSM 12260]
 gi|310783437|gb|EFQ23835.1| phage SPO1 DNA polymerase-related protein [Aminomonas paucivorans
           DSM 12260]
          Length = 228

 Score =  168 bits (426), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 10/190 (5%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L E +  +     C L  T   ++         L+ +G  P   ++  G PF G+ G +L
Sbjct: 30  LEEARHRVERCLRCPLGKTRNKSVFGEGNLWGKLLFVGEGPGADEDEQGMPFVGRAGQLL 89

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++LQ+  I R  ++I+ +    PPGNR  +  EM  C   +  QI L  P +L+ +GN 
Sbjct: 90  TQILQAAGIRREDVYITNVVKCRPPGNRVPTFEEMMACDEYLQTQIALGRPSLLVLLGNT 149

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWHAL 251
              +      +   +  G+W +       +  L   HP  L++YP       K  TW  +
Sbjct: 150 PTKWILK-TTEGISKLRGRWFSW----KGMSVLPMFHPSYLLRYPSSTEGSPKHLTWLDI 204

Query: 252 ITLKKALKNL 261
             +K+    +
Sbjct: 205 QEVKRKWDEV 214


>gi|187777334|ref|ZP_02993807.1| hypothetical protein CLOSPO_00886 [Clostridium sporogenes ATCC
           15579]
 gi|187774262|gb|EDU38064.1| hypothetical protein CLOSPO_00886 [Clostridium sporogenes ATCC
           15579]
          Length = 193

 Score =  168 bits (426), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 45/186 (24%), Positives = 76/186 (40%), Gaps = 6/186 (3%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             +L +   + + C L     + +         ++ IG  P   ++ +GKPF GK G +L
Sbjct: 7   WSQLYNECINCNKCPLVKDRTNMVFGEGYINAPIIFIGEAPGADEDRTGKPFVGKAGQLL 66

Query: 137 DKMLQSIEIMRT-QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
            K L ++E  R    +I  +    P  NR     E   C P +  Q+ L+ PKI++ +G 
Sbjct: 67  TKALLALEFKRDEHYYICNVCKCRPENNRTPKEEEARECLPFLRNQVALVKPKIIVCLGA 126

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
               +    +  +  ++ GKW            +AT HP  L +    KK  W  L ++K
Sbjct: 127 TPLKYIIG-EQFRITRDRGKWIE----RKGYHIMATFHPAALFRDESKKKLFWQDLKSIK 181

Query: 256 KALKNL 261
                L
Sbjct: 182 VKYDEL 187


>gi|308751050|gb|ADO44533.1| phage SPO1 DNA polymerase-related protein [Hydrogenobacter
           thermophilus TK-6]
          Length = 219

 Score =  168 bits (425), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 2/191 (1%)

Query: 68  DSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127
            S   K   LHEL   L     C L   S   +         ++ +G  P + ++   KP
Sbjct: 27  KSKPDKRRMLHELYETLSKEKKCILYEGSSGYVFGDGNPDSAVVFVGEAPGEEEDKQKKP 86

Query: 128 FSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP 187
           F GK G  L+  LQ + + R  ++I+ +    PPGNR  +  EM  C P + ++IE+I P
Sbjct: 87  FVGKAGKYLNAKLQEVGMRREDVYITNVVKSRPPGNRKPTKEEMLSCLPYLRKEIEIIKP 146

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247
           K+++ +G+          A    +  G+          I  L T HP  +++ P   +  
Sbjct: 147 KLIVCLGSTALEGLLG-KALPITKYRGQVFEYPYS-RNIKVLLTYHPAYVLRNPSADREF 204

Query: 248 WHALITLKKAL 258
              +  +K  L
Sbjct: 205 MEDMKKVKALL 215


>gi|158337182|ref|YP_001518357.1| DNA polymerase bacteriophage-type [Acaryochloris marina MBIC11017]
 gi|158307423|gb|ABW29040.1| DNA polymerase bacteriophage-type, putative [Acaryochloris marina
           MBIC11017]
          Length = 232

 Score =  168 bits (425), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 14/221 (6%)

Query: 47  DSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTE 106
           ++  + +T+     SP V           +L EL +  +    C L  +    + +    
Sbjct: 16  ETVSEAVTHEEISASPQVPIPKGFY---QNLQELTTHCQQCQRCDLAPSRTHVVVSRGNP 72

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM-RTQIHISMISPWHPPGNRN 165
              ++IIG  P   ++ +G PF G+ G +LDK+L S+++  +  ++I  I    PPGNR 
Sbjct: 73  EAPILIIGEGPGQHEDETGLPFVGRAGQLLDKILASVKLDSQNDVYICNIVKCRPPGNRT 132

Query: 166 LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI 225
            +  E   C+P ++ QI L++PKI+L  G          D +   +  G+W         
Sbjct: 133 PTPDESAACKPYLLEQIRLVNPKIILLTGATAVRGLTG-DKRGITKIRGQWLAWQN---- 187

Query: 226 IPTLATVHPQELIQYPL-----IKKNTWHALITLKKALKNL 261
              +  +HP  L++ P       K   W  +  ++  L  L
Sbjct: 188 YLCMPILHPAYLLRNPSPEPGKPKWLMWQDIQAVRAKLDEL 228


>gi|318041681|ref|ZP_07973637.1| hypothetical protein SCB01_08212 [Synechococcus sp. CB0101]
          Length = 214

 Score =  168 bits (425), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 8/207 (3%)

Query: 62  PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121
           P      S A+    L ++ +       C L  +    + +       LM+IG  P   +
Sbjct: 5   PPQASRLSAAELEQELDQVAAACDGCRRCGLGHSRTQVVVSRGNPRAPLMVIGEGPGAQE 64

Query: 122 NISGKPFSGKTGNMLDKMLQSIEIM-RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180
           +  GKPF G++G +LD+ML+S+ I      ++  I    PP NR  + +EM  CRP + +
Sbjct: 65  DEQGKPFVGRSGQLLDRMLESVGIDSNRDAYVCNIVKCRPPENRKPTGLEMAACRPWLDQ 124

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH-SIIPTLATVHPQELIQ 239
           QI+L+ P ++L  G                +  G+W             +  +HP  L++
Sbjct: 125 QIQLVDPPVILLAGATAVEGLLGIKG-GITKLRGQWRKGEGGSLEGRWLMPILHPSYLLR 183

Query: 240 YPLI-----KKNTWHALITLKKALKNL 261
                    K  TWH L  +++ L  L
Sbjct: 184 NASKERGSPKWLTWHDLQDVQRRLAQL 210


>gi|319943628|ref|ZP_08017909.1| arginine biosynthesis ArgJ [Lautropia mirabilis ATCC 51599]
 gi|319742861|gb|EFV95267.1| arginine biosynthesis ArgJ [Lautropia mirabilis ATCC 51599]
          Length = 409

 Score =  168 bits (425), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 45/213 (21%), Positives = 79/213 (37%), Gaps = 4/213 (1%)

Query: 50  IQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQ- 108
            +P+                +   A     L+  +     C L  T  +T+       Q 
Sbjct: 191 PEPMLPAEPEPESAPLSHPDL-PPAQRWIRLREDVDGCRRCRLAETRTNTVFGRGRPQQA 249

Query: 109 DLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRT-QIHISMISPWHPPGNRNLS 167
             M+IG  P   ++  G+ F G+ G +LD ML +  I  +  + I+ +    PP NRN  
Sbjct: 250 RWMLIGEGPGAEEDKQGEAFVGQAGKLLDAMLDAAGIDPSADVFIANVLKCRPPNNRNPE 309

Query: 168 NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227
             E+  C   +  QI L+ P  +L +G         +   +  +   K  ++      +P
Sbjct: 310 PDEVAACEGYLYEQIRLVQPDCILLLGRFAAQSVL-HSELQIGRLRNKLHHITLDGRQVP 368

Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            + T HP  L++    K   W  L     A++ 
Sbjct: 369 VVVTYHPAYLLRNQRDKLKGWEDLCLALSAMEA 401


>gi|315426164|dbj|BAJ47808.1| DNA polymerase bacteriophage-type [Candidatus Caldiarchaeum
           subterraneum]
          Length = 200

 Score =  168 bits (425), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 79/186 (42%), Gaps = 7/186 (3%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L  +   +R+   C L     + +        +LM IG  P + +++ G+PF G++G +L
Sbjct: 9   LDAIAEEVRACRLCPLWRGRRNAVPGEGNPRAELMFIGEGPGEEEDLQGRPFVGRSGRLL 68

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP-IIMRQIELISPKILLFIGN 195
            + L+   I R  + I+ +    PP NR  +  E + C    + RQIE ++P++++ +G+
Sbjct: 69  TEALEKAGIRREDVFITNVVKCRPPENREPTPEERQTCTNKYLFRQIEAVNPRLIVLLGS 128

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
                     +       GK               T HP   +  P  ++  +  +   +
Sbjct: 129 VAVQTLLGISSV--TAVRGKAFE----KMGRRFFCTYHPAAALYNPGNRETFFSDIKKAR 182

Query: 256 KALKNL 261
           + L++L
Sbjct: 183 ELLESL 188


>gi|119356182|ref|YP_910826.1| phage SPO1 DNA polymerase-related protein [Chlorobium
           phaeobacteroides DSM 266]
 gi|119353531|gb|ABL64402.1| phage SPO1 DNA polymerase-related protein [Chlorobium
           phaeobacteroides DSM 266]
          Length = 223

 Score =  168 bits (424), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 5/205 (2%)

Query: 57  RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYT 116
                 L             L  L   ++S   C L ++  + +         L++IG  
Sbjct: 7   SDHDDTLPSVQSEAGAPFRDLIGLSLAVKSCTKCRLSASRKNVVFGEGDPRAALVVIGEA 66

Query: 117 PSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP 176
           P   ++  G+PF G++G +LDK+LQ+++  R ++ I  I    PP NRN    E+E C P
Sbjct: 67  PGADEDSQGRPFVGRSGQLLDKILQAVQFKREEVFICNILKCRPPQNRNPLADEIECCMP 126

Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236
            ++ Q+EL++PK++L +G    N     ++       G+             + T HP  
Sbjct: 127 WLLLQLELLNPKLILLLGKVAANTILQ-NSLSMGAMRGRI----VKWKAYDCMVTYHPAA 181

Query: 237 LIQYPLIKKNTWHALITLKKALKNL 261
           L++ P  KK  W  +  +++    L
Sbjct: 182 LLRNPGWKKACWEDVQMMRQHYDKL 206


>gi|154499968|ref|ZP_02038006.1| hypothetical protein BACCAP_03625 [Bacteroides capillosus ATCC
           29799]
 gi|150271566|gb|EDM98823.1| hypothetical protein BACCAP_03625 [Bacteroides capillosus ATCC
           29799]
          Length = 188

 Score =  168 bits (424), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 48/187 (25%), Positives = 90/187 (48%), Gaps = 5/187 (2%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            +   L++       C L  T  + +  T     ++M IG  P + +++ G+PF G+ G 
Sbjct: 2   KNWEALQAECMDCRKCALAETRHNVVFGTGNPNAEVMFIGEGPGEQEDLKGEPFVGRAGK 61

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           +LD ML+ I++ R++I+I+ +    PP NR+  N+E E C   +  Q+ +I PKI++ +G
Sbjct: 62  LLDDMLEIIDLDRSKIYITNMVKCRPPQNRDPLNVEQEACIGYLRNQVAIIRPKIIVCLG 121

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
                     D  K  +  G+W       + +   A  HP  L++ P  +   +  L +L
Sbjct: 122 RIAAMKLIKED-FKITKEHGQWVE----KAGVQMTAMYHPAALLRNPGWRPAAFEDLKSL 176

Query: 255 KKALKNL 261
           +  +K +
Sbjct: 177 QAKIKEI 183


>gi|327400521|ref|YP_004341360.1| phage SPO1 DNA polymerase-like protein [Archaeoglobus veneficus
           SNP6]
 gi|327316029|gb|AEA46645.1| phage SPO1 DNA polymerase-related protein [Archaeoglobus veneficus
           SNP6]
          Length = 202

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 41/189 (21%), Positives = 89/189 (47%), Gaps = 3/189 (1%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            SL ++++ +RS   C+L  T  + +        +++ +G  P   ++  G+PF G  G 
Sbjct: 2   ESLEDIEAEIRSCKKCNLWKTKTNYVPGEGNPKAEVVFVGEAPGREEDRQGRPFVGNAGK 61

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           +L +M++ + + R  + I  I    PP NR+    E+E C P ++RQ+++I P I++ +G
Sbjct: 62  ILTEMIEKLGLRREDVFIGNILKCRPPNNRDPLPEEIEACSPYLIRQLDVIKPSIIVCLG 121

Query: 195 NKTKNFF---FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
             + +F    F  + +   +  G+   +      +  +A  HP  ++  P +++      
Sbjct: 122 RHSASFLFNFFGIEFRGISKERGRVKEVERWGKKVRLIAIYHPAAILYRPQLREMFEEDF 181

Query: 252 ITLKKALKN 260
             +   L+ 
Sbjct: 182 AVIAGLLRE 190


>gi|300853380|ref|YP_003778364.1| putative phage related DNA polymerase [Clostridium ljungdahlii DSM
           13528]
 gi|300433495|gb|ADK13262.1| predicted phage related DNA polymerase [Clostridium ljungdahlii DSM
           13528]
          Length = 192

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 43/186 (23%), Positives = 75/186 (40%), Gaps = 6/186 (3%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             EL     S   C L     + +         +M IG  P   ++ +G PF G+ G +L
Sbjct: 4   WKELYEECLSCSKCSLGDNRTNMVFGDGNPKAHIMFIGEAPGADEDRTGIPFVGRAGQLL 63

Query: 137 DKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
            K L ++++ R    +I  I    P  NR     E + C P +  Q+ L+ PKI++ +G 
Sbjct: 64  TKALLALDLHRERDYYICNICKCRPKNNRTPYEEEEKACIPYLRNQVALVRPKIIVCLGA 123

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
                    +  +  ++ GKW             AT HP  +++    K   W  L ++K
Sbjct: 124 TAMGCILGKEW-RITRDRGKWIE----RKGFYMTATFHPSAVLRDANKKAAFWEDLKSIK 178

Query: 256 KALKNL 261
           +  + +
Sbjct: 179 EKNEEI 184


>gi|261367056|ref|ZP_05979939.1| uracil-DNA glycosylase [Subdoligranulum variabile DSM 15176]
 gi|282571175|gb|EFB76710.1| uracil-DNA glycosylase [Subdoligranulum variabile DSM 15176]
          Length = 188

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 42/187 (22%), Positives = 87/187 (46%), Gaps = 6/187 (3%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
            L  L+    +   C LC +    +        +++ +G  P  +++  G+PF G++G +
Sbjct: 2   DLQTLQQECLACRRCGLCESRTHVVFGQGVPNAEVLFVGEGPGANEDAQGQPFVGRSGQL 61

Query: 136 LDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           LD  L+++++ R +  +I+ I    PP NR+    E   C P + +Q +L+ PKI++ +G
Sbjct: 62  LDHYLEAVDLNREKNVYIANIVKCRPPQNRDPLPEESAACLPWLRQQFQLLRPKIIVCLG 121

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
                           ++ GK+ +          +AT HP  L++YP+ K   +   + L
Sbjct: 122 RIAAQQLI-EPGFSVTRDHGKFFD----KHGTLFMATYHPAALLRYPVNKPAVFGDFVAL 176

Query: 255 KKALKNL 261
           ++ +  +
Sbjct: 177 REKIAQV 183


>gi|195953859|ref|YP_002122149.1| phage SPO1 DNA polymerase-related protein [Hydrogenobaculum sp.
           Y04AAS1]
 gi|195933471|gb|ACG58171.1| phage SPO1 DNA polymerase-related protein [Hydrogenobaculum sp.
           Y04AAS1]
          Length = 245

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 42/192 (21%), Positives = 76/192 (39%), Gaps = 5/192 (2%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
             L       +    C L       +         +M +G  P   +++ GKPF GK G 
Sbjct: 53  RQLKAFYETCKDCKKCKLSEQRTQVVFGDGNPDTGIMFVGEGPGADEDVEGKPFVGKAGK 112

Query: 135 MLDKMLQSIEIMRTQ-IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
           +L + L+ + ++R +  +I+ +    PPGNR     EM  C  I+  +++LI PK+++ +
Sbjct: 113 LLTQELERVGLLRQRDYYITNVVKCRPPGNRTPEEQEMITCSYILKEEMKLIKPKLVIAL 172

Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTP----HSIIPTLATVHPQELIQYPLIKKNTWH 249
           G                +  G + +                T HP  L++ P   KN   
Sbjct: 173 GRTAAVGLSGIKQISPTKVRGSFISANLKSPVLAPGTKIFVTYHPSYLLRNPNELKNFRE 232

Query: 250 ALITLKKALKNL 261
            +I +K  + +L
Sbjct: 233 DIIKIKSLVDSL 244


>gi|257094232|ref|YP_003167873.1| phage SPO1 DNA polymerase-like protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257046756|gb|ACV35944.1| phage SPO1 DNA polymerase-related protein [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 287

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 49/238 (20%), Positives = 87/238 (36%), Gaps = 5/238 (2%)

Query: 26  WVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLR 85
            + D        ++  + + +                  +   +         EL   + 
Sbjct: 41  VLADATRAGLHQQAVEQARPLPGGASADVPSAARTERTERTERAEQIARLGWDELAESVA 100

Query: 86  SFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI 145
           +   C LC      +      G D + IG  P   ++  G+PF G  G +LD ML +I++
Sbjct: 101 ACRACGLCEQRRQAVLGVGDHGADWLFIGEGPGAEEDARGEPFVGPAGKLLDAMLAAIDL 160

Query: 146 MR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204
            R   ++I+      PP NR    +EM  C P + RQIELI P++++ +G    +    +
Sbjct: 161 RRGADVYIANAVKCRPPSNRTPEAVEMVACAPYLRRQIELIQPRLIVLLGRAAAHALLGD 220

Query: 205 DAQKTYQNLGKWSNLCTPHSI---IPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
                    G+             IP + T HP  L++    K   W  L   +  ++
Sbjct: 221 VGSLAS-LRGRPLEYREGAGGRVAIPVVVTYHPAYLLRTLPDKAKAWEDLCRARTVMR 277


>gi|57642078|ref|YP_184556.1| Uracil-DNA glycosylase [Thermococcus kodakarensis KOD1]
 gi|57160402|dbj|BAD86332.1| Uracil-DNA glycosylase [Thermococcus kodakarensis KOD1]
          Length = 196

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 45/188 (23%), Positives = 90/188 (47%), Gaps = 3/188 (1%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           + +L+  +R+   C L +   + +    +    +M +G  P   ++  G PF G+ G +L
Sbjct: 9   MKKLEEKIRNCQKCPLGTLRTNAVPGAGSYDAKVMFVGEAPGYWEDQKGLPFVGRAGKLL 68

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           D++L  I + R +++I+ I    PP NR+ +  E++ C P + RQI++I PK+++ +G  
Sbjct: 69  DELLAEIGLSRDEVYITNIVKCRPPENRDPTEEEIKACSPYLDRQIDIIRPKVIIPLGRY 128

Query: 197 TKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253
           + N+       + +   +  GK     T    I  +   HP   +  P +++        
Sbjct: 129 SMNYLLRKFGFEPEPISRIHGKTFEAHTLFGKIIIMPMYHPAAALYKPPLREELRKDFQK 188

Query: 254 LKKALKNL 261
           LK  L+N+
Sbjct: 189 LKSLLENI 196


>gi|153956358|ref|YP_001397123.1| Phage-related DNA polymerase [Clostridium kluyveri DSM 555]
 gi|146349216|gb|EDK35752.1| Phage-related DNA polymerase [Clostridium kluyveri DSM 555]
          Length = 192

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 6/186 (3%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             EL     + + C L  + ++ +        DL+ IG  P   ++  G PF GK G +L
Sbjct: 4   WRELYEQCINCNKCGLGDSRINMVFGDGNPKADLVFIGEAPGADEDRIGLPFVGKAGKLL 63

Query: 137 DKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
            K L+S+++ R    +I  I    P  NR     E + C P +  Q+ LI PKI++ +G 
Sbjct: 64  TKALESLDLYRKKDYYICNICKCRPKNNRTPYEDEEKACLPYLRNQVALIKPKIIVCLGA 123

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
                    D  +  ++ GKW             AT HP  +++    K   W  L  ++
Sbjct: 124 TAMGCILGKDW-RITRDRGKWVE----RKGFYITATFHPSAILRDENKKPLFWQDLKNIR 178

Query: 256 KALKNL 261
           +  + +
Sbjct: 179 RKYEEI 184


>gi|156937095|ref|YP_001434891.1| phage SPO1 DNA polymerase-related protein [Ignicoccus hospitalis
           KIN4/I]
 gi|156566079|gb|ABU81484.1| phage SPO1 DNA polymerase-related protein [Ignicoccus hospitalis
           KIN4/I]
          Length = 191

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 76/177 (42%), Gaps = 3/177 (1%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L E+   ++    C LC    + +     EG +++ +G  P   ++  G+PF G+ G +L
Sbjct: 3   LREVAEKVKGCCKCDLCKVRKNPVPGEGDEGAEVVFVGEAPGKEEDEEGRPFVGRAGRLL 62

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
              +  I     + +I+ +    PPGNR  +  E+E C+P ++ ++  I PK+++ +G  
Sbjct: 63  RSTISQIGFK--KYYITNVVKCRPPGNRTPTEEEVEACKPYLIEELNCIRPKLVVALGRT 120

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253
                            GK        + +  L T HP  +++ P +K+     L  
Sbjct: 121 AAEALLGLKGPLKG-VRGKVLVASAGGARVKVLVTYHPAAVLRNPKLKEQFVSDLKK 176


>gi|188997005|ref|YP_001931256.1| phage SPO1 DNA polymerase-related protein [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188932072|gb|ACD66702.1| phage SPO1 DNA polymerase-related protein [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 217

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 44/195 (22%), Positives = 86/195 (44%), Gaps = 5/195 (2%)

Query: 60  HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSD 119
              L Q++ +   K   L+++   ++    C L  +  + +         +M IG  P +
Sbjct: 22  KPILNQKSSNQIDKIEELNKIYEEIKVCTKCDLHKSRTNPVLGEGNINAKIMFIGEAPGE 81

Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIM 179
            ++  G+PF G+ G +L K +++   +R +++I+ I+   PP NR  +  E E C P ++
Sbjct: 82  EEDKQGRPFVGRAGKLLTKCIENAGHIREEVYIANINKCRPPNNRTPTIEEQEACIPFLL 141

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
           RQIE+I+PK+L  +G       F     K  +  G                T HP  +++
Sbjct: 142 RQIEIINPKVLCLLGATAYRGIFK-KEAKITKERGSILEFMGK----KVYITYHPAYVLR 196

Query: 240 YPLIKKNTWHALITL 254
            P  ++     +  +
Sbjct: 197 NPKEEETFCQDIKNV 211


>gi|219856673|ref|YP_002473795.1| hypothetical protein CKR_3330 [Clostridium kluyveri NBRC 12016]
 gi|219570397|dbj|BAH08381.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 196

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 6/186 (3%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             EL     + + C L  + ++ +        DL+ IG  P   ++  G PF GK G +L
Sbjct: 8   WRELYEQCINCNKCGLGDSRINMVFGDGNPKADLVFIGEAPGADEDRIGLPFVGKAGKLL 67

Query: 137 DKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
            K L+S+++ R    +I  I    P  NR     E + C P +  Q+ LI PKI++ +G 
Sbjct: 68  TKALESLDLYRKKDYYICNICKCRPKNNRTPYEDEEKACLPYLRNQVALIKPKIIVCLGA 127

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
                    D  +  ++ GKW             AT HP  +++    K   W  L  ++
Sbjct: 128 TAMGCILGKDW-RITRDRGKWVE----RKGFYITATFHPSAILRDENKKPLFWQDLKNIR 182

Query: 256 KALKNL 261
           +  + +
Sbjct: 183 RKYEEI 188


>gi|225849400|ref|YP_002729564.1| uracil-DNA glycosylase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644302|gb|ACN99352.1| uracil-DNA glycosylase family 4 protein [Sulfurihydrogenibium
           azorense Az-Fu1]
          Length = 211

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 80/185 (43%), Gaps = 5/185 (2%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
           +K   L+++   +++   C L       +         +M IG  P + ++  G+PF G+
Sbjct: 28  EKIKLLNQINQEIQNCTKCDLHKNRKQAVLGEGNPNSPIMFIGEAPGEEEDKQGRPFVGR 87

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191
            G +L K +++    R+ ++I+ I+   PP NR  +  E E C P + RQIE+I+P +L 
Sbjct: 88  AGQLLTKAIETAGYKRSDVYIANINKCRPPNNRTPTIEEQEACFPYLKRQIEIINPSVLC 147

Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
            +G       F  +  K  +  G   +            T HP  +++ P  +   +  +
Sbjct: 148 LLGATAYRGIFKRET-KITKERGSILDYEGK----KVYITYHPAFVLRNPREEPTFFEDI 202

Query: 252 ITLKK 256
               +
Sbjct: 203 KKALE 207


>gi|18977757|ref|NP_579114.1| DNA polymerase [Pyrococcus furiosus DSM 3638]
 gi|18893498|gb|AAL81509.1| DNA polymerase, bacteriophage-type [Pyrococcus furiosus DSM 3638]
          Length = 196

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 3/188 (1%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           + +L+  + +   C L     + +         +M IG  P   ++  G PF GK G +L
Sbjct: 7   MKKLEEKILTCKKCPLWRLRTNPVPGYGNYDAKIMFIGEAPGYWEDQKGLPFVGKAGKVL 66

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           D++L  I + R  ++I+ +    PP NR+ +  E++ C P + +QI++I PK+++ +G  
Sbjct: 67  DELLDGIGLTREDVYITNVVKCRPPNNRDPTEEEIKACSPYLDQQIDIIKPKVIVTLGRH 126

Query: 197 TKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253
           + N+       D +   +  GK     T    +    T HP   +  P +K+        
Sbjct: 127 STNYILKKFGFDLEPISKIHGKVFKAKTLFGTLYIFPTYHPAVALYRPQLKEELKQDFDI 186

Query: 254 LKKALKNL 261
           LK  L+ L
Sbjct: 187 LKSLLEKL 194


>gi|317133620|ref|YP_004092934.1| phage SPO1 DNA polymerase-related protein [Ethanoligenens
           harbinense YUAN-3]
 gi|315471599|gb|ADU28203.1| phage SPO1 DNA polymerase-related protein [Ethanoligenens
           harbinense YUAN-3]
          Length = 192

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 5/188 (2%)

Query: 74  ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
             S  EL++  ++   C L       +  T +   +++ IG  P   +++ G+PF G+ G
Sbjct: 2   PESWDELEAACKACTACGLAEKRTQVVFGTGSREAEVLFIGEGPGQQEDLKGEPFVGRAG 61

Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
            +LDKML ++ + R++I+I+ I    PP NR+    E + C P +  Q +L++PKI++ +
Sbjct: 62  QLLDKMLVAVGLDRSKIYIANIVKCRPPQNRDPLPEEQDACLPWLRAQTKLLAPKIIICV 121

Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253
           G          D  K  +  G+W         +  +AT+HP  L++ P  K   +   + 
Sbjct: 122 GRIAGMKLMKPDL-KITREHGQWF----QRGHVLMMATLHPAALLRNPNQKPEAFKDFLA 176

Query: 254 LKKALKNL 261
           L+  +K +
Sbjct: 177 LRDKIKEI 184


>gi|288817443|ref|YP_003431790.1| phage SPO1 DNA polymerase-related protein [Hydrogenobacter
           thermophilus TK-6]
 gi|288786842|dbj|BAI68589.1| phage SPO1 DNA polymerase-related protein [Hydrogenobacter
           thermophilus TK-6]
          Length = 185

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 2/182 (1%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           LHEL   L     C L   S   +         ++ +G  P + ++   KPF GK G  L
Sbjct: 2   LHELYETLSKEKKCILYEGSSGYVFGDGNPDSAVVFVGEAPGEEEDKQKKPFVGKAGKYL 61

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           +  LQ + + R  ++I+ +    PPGNR  +  EM  C P + ++IE+I PK+++ +G+ 
Sbjct: 62  NAKLQEVGMRREDVYITNVVKSRPPGNRKPTKEEMLSCLPYLRKEIEIIKPKLIVCLGST 121

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                    A    +  G+          I  L T HP  +++ P   +     +  +K 
Sbjct: 122 ALEGLLG-KALPITKYRGQVFEYPYS-RNIKVLLTYHPAYVLRNPSADREFMEDMKKVKA 179

Query: 257 AL 258
            L
Sbjct: 180 LL 181


>gi|229816615|ref|ZP_04446913.1| hypothetical protein COLINT_03672 [Collinsella intestinalis DSM
           13280]
 gi|229807821|gb|EEP43625.1| hypothetical protein COLINT_03672 [Collinsella intestinalis DSM
           13280]
          Length = 226

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 42/185 (22%), Positives = 79/185 (42%), Gaps = 5/185 (2%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           SL E++S++     C L  T  + +         +M +G  P  ++++ G+PF G+ G  
Sbjct: 18  SLDEIRSVMGDCRACQLYQTRTNIVFGVGNPRARVMFVGEAPGKNEDLQGEPFVGRAGEN 77

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           L+++L    + R  I+I+ +    PP NRN    E+  C P +  QI  I P +++ +GN
Sbjct: 78  LNRILSLAGLEREDIYIANVLKCRPPQNRNPQADEVLACSPYLREQIRSIWPDVIVTLGN 137

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
              +F    +     +  G++  +         + T HP   ++ P  +         L 
Sbjct: 138 PASHFVLKTE-VGITKLRGRFHQM----GHFTVMPTFHPAAALRNPAWQALLEEDFRMLG 192

Query: 256 KALKN 260
             L  
Sbjct: 193 AYLAE 197


>gi|262276833|ref|ZP_06054626.1| uracil DNA glycosylase superfamily [alpha proteobacterium HIMB114]
 gi|262223936|gb|EEY74395.1| uracil DNA glycosylase superfamily [alpha proteobacterium HIMB114]
          Length = 217

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 59/193 (30%), Positives = 103/193 (53%), Gaps = 2/193 (1%)

Query: 68  DSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127
             I+    +L++LK  + +  D +        + +       +MIIG  P  SD I+GKP
Sbjct: 23  KKISNSCLTLNDLKKKINNLKDFYNKKQ-DQIVFSDGNSKSKIMIIGDAPGVSDEINGKP 81

Query: 128 FSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP 187
           FSG++G +LDKML +I + R +++++ I  +    N+ L  +E++  R II   I++I+P
Sbjct: 82  FSGESGELLDKMLMAINLDRNKVYLTNIINFRLQDNKKLGPVEIKNYRSIIFDHIKIINP 141

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247
           KI+  +G+ T NFFF N      ++ G W+ +   ++    L + HP  L++ P  KK +
Sbjct: 142 KIIFILGSVTFNFFFKNTQSL-TKSRGHWNKIKISNNEYDCLPSYHPAFLLRQPSQKKAS 200

Query: 248 WHALITLKKALKN 260
           W  L  LK+ +  
Sbjct: 201 WEDLKNLKQKIIE 213


>gi|167769246|ref|ZP_02441299.1| hypothetical protein ANACOL_00569 [Anaerotruncus colihominis DSM
           17241]
 gi|167668886|gb|EDS13016.1| hypothetical protein ANACOL_00569 [Anaerotruncus colihominis DSM
           17241]
          Length = 188

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 50/188 (26%), Positives = 90/188 (47%), Gaps = 6/188 (3%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            S   L+S   +   C LC T  S +    ++   +M IG  P +++++ G+PF G+ G 
Sbjct: 3   ESFQALQSAALACQGCKLCQTRHSVVFGAGSQHAKIMFIGEGPGENEDLQGEPFVGRAGQ 62

Query: 135 MLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
           +LDK+L  + + R    +I+ +    PP NR+    E+E C P +  QIE I PKI++ +
Sbjct: 63  LLDKILTHVGLSRQNDVYITNMVKCRPPKNRDPERDEVEACMPYLRAQIEFIRPKIIVCL 122

Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253
           G        + + +   +  G++ +       +  + T HP  L++ P+ K       I 
Sbjct: 123 GRVAACALIDPNFKV-TRQHGEFFD----KDGLMMMGTFHPAALLRNPVNKPGALDDFIN 177

Query: 254 LKKALKNL 261
           L+  L +L
Sbjct: 178 LRARLDSL 185


>gi|212224669|ref|YP_002307905.1| Uracil-DNA glycosylase [Thermococcus onnurineus NA1]
 gi|212009626|gb|ACJ17008.1| Uracil-DNA glycosylase [Thermococcus onnurineus NA1]
          Length = 195

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 87/183 (47%), Gaps = 3/183 (1%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           +++L+  ++S   C L     + +  + +    +M +G  P   ++  G PF G+ G +L
Sbjct: 7   MNKLEEKIKSCRKCPLGELRTNAVPGSGSYNAKVMFVGEAPGYWEDQKGLPFVGRAGKVL 66

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           D++L  I + R +++I+ I    PP NR+ +  E++ C P + RQI++I PK+++ +G  
Sbjct: 67  DELLAEIGLDRDEVYITNIVKCRPPDNRDPTEDEIKACSPYLDRQIDIIRPKVIVPLGRH 126

Query: 197 TKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253
           +  +       + +   +  GK     T    I  +   HP   +  P +K+        
Sbjct: 127 SMRYILEKFGFEVEPISKIHGKAFEAHTLFGKIVIMPMYHPAVALYRPALKEELRKDFQK 186

Query: 254 LKK 256
           L++
Sbjct: 187 LRE 189


>gi|15899042|ref|NP_343647.1| DNA polymerase phage SPO1 N-terminal domain-containing protein
           [Sulfolobus solfataricus P2]
 gi|284175291|ref|ZP_06389260.1| DNA polymerase phage SPO1 N-terminal domain-containing protein
           [Sulfolobus solfataricus 98/2]
 gi|13815575|gb|AAK42437.1| DNA polymerase phage SPO1 N-terminal domain homolog [Sulfolobus
           solfataricus P2]
 gi|261600789|gb|ACX90392.1| phage SPO1 DNA polymerase-related protein [Sulfolobus solfataricus
           98/2]
          Length = 216

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 4/190 (2%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            +L  +   +R    C L     + +        ++M IG  P ++++I GKPF G  G 
Sbjct: 2   DNLDLIADEVRKCQKCKLWKFRKNAVPGEGNSKAEIMFIGEAPGENEDIEGKPFVGVAGK 61

Query: 135 MLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
           +L +++ + + + R  + I+ +    PP NR+    E+  C P + RQIE I P I++ +
Sbjct: 62  LLTRLINEILGLSREDVFITNLVKCRPPNNRDPEEDEILACSPYLTRQIESIRPHIIITL 121

Query: 194 GNKTKNFFFNNDAQKT---YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
           G  + ++ F     K     +  GK+         I    T HP   +  P I+K     
Sbjct: 122 GRHSTSYLFKKMNMKMESIGKVRGKFYTWNIYGYKILVFPTYHPAAALYNPPIRKVLEED 181

Query: 251 LITLKKALKN 260
              +K+AL +
Sbjct: 182 FRKVKEALSS 191


>gi|126460679|ref|YP_001056957.1| phage SPO1 DNA polymerase-related protein [Pyrobaculum calidifontis
           JCM 11548]
 gi|126250400|gb|ABO09491.1| phage SPO1 DNA polymerase-related protein [Pyrobaculum calidifontis
           JCM 11548]
          Length = 194

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 83/182 (45%), Gaps = 3/182 (1%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           +L +L   ++    C L  T  + +    +    +MI+G  P  S++  G+PF G  G++
Sbjct: 3   TLEQLHEEIKRCTRCPLHKTRRNAVPGEGSGRLGIMIVGEAPGSSEDEQGRPFVGAAGSL 62

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           L+K L ++ + R  ++I+ +    PPGNR  +  E+  C P ++RQIE++ P+ ++ +G 
Sbjct: 63  LNKTLSTLGVERGDLYITNVVKCRPPGNRTPTREEVAACLPYLLRQIEILRPRRIIALGA 122

Query: 196 KTKNFFFNNDAQKTYQ---NLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
            +         ++  +     GK          +    T HP  +++ P ++      L 
Sbjct: 123 VSAGALLGLIGRQVERVGDVRGKCFRGKVAGVDVEICVTYHPAAVLRNPRLRGTFAEDLA 182

Query: 253 TL 254
             
Sbjct: 183 AF 184


>gi|15606784|ref|NP_214164.1| N-terminus of phage SPO1 DNA polymerase [Aquifex aeolicus VF5]
 gi|2984015|gb|AAC07559.1| N-terminus of phage SPO1 DNA polymerase [Aquifex aeolicus VF5]
          Length = 195

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 78/183 (42%), Gaps = 3/183 (1%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L  L    +    C L  +    +         L+ +G  P + ++  GKPF G+ G +L
Sbjct: 12  LKNLYEEWKDCTRCDLHKSRTRVVPGDGNPYSLLVFVGEAPGEEEDRQGKPFVGRAGQLL 71

Query: 137 DKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           +++++ +  + R  ++I+ +    PP NR  + IEM  C P + ++IE+I PK++  +G 
Sbjct: 72  NRLIEEVLGMKREDVYITNVCKCRPPQNRKPTPIEMRACFPYLKKEIEIIQPKVICCLGA 131

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
                     + +  +  G+          I    T HP  +++ P  +         LK
Sbjct: 132 TAGEGILG-KSLRITKVRGQVFPYPYNPR-IKVFLTYHPAYVLRNPKEETTIIKDFEKLK 189

Query: 256 KAL 258
           + L
Sbjct: 190 ELL 192


>gi|300311462|ref|YP_003775554.1| uracil-DNA glycosylase [Herbaspirillum seropedicae SmR1]
 gi|300074247|gb|ADJ63646.1| uracil-DNA glycosylase protein [Herbaspirillum seropedicae SmR1]
          Length = 340

 Score =  166 bits (419), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 52/222 (23%), Positives = 85/222 (38%), Gaps = 12/222 (5%)

Query: 47  DSAIQPITNIRHIHSPLVQQADSIAQKAC--SLHELKSLLRSFHDCHLCSTSLSTICATQ 104
            ++++P+          +   D +  +       +LK  +     C LC     T+    
Sbjct: 120 AASLEPVLIPEGEDDEPMPAVDPVIARIKQMDWPQLKEQVADCRRCGLCQGRKKTVFGVG 179

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPG- 162
            E    + IG  P  +++I G+PF G  G +LD ML S+ + R    +I+ I    P   
Sbjct: 180 DEKAKWLFIGEGPGRNEDIQGEPFVGPAGKLLDNMLVSMGVKRGDNAYIANIVKCRPTDE 239

Query: 163 ---NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSN 218
              +R  S  E+  C P + RQIELI P +L+ +G          D      +  G    
Sbjct: 240 NGRDRPPSPQEVASCLPYLQRQIELIQPTVLVALGKTAAISLLGLDPTTPVARLRGTVHR 299

Query: 219 LCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
                  +P + T HP  L++    K  TW  L       + 
Sbjct: 300 YQ----ELPLVVTYHPAYLLRSLQDKSKTWADLCLAMSTYQA 337


>gi|332527846|ref|ZP_08403884.1| putative DNA polymerase-like protein [Rubrivivax benzoatilyticus
           JA2]
 gi|332112241|gb|EGJ12217.1| putative DNA polymerase-like protein [Rubrivivax benzoatilyticus
           JA2]
          Length = 227

 Score =  166 bits (419), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 12/188 (6%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
               L+  +     C L  +   T+          MI+G  P + +++ G+PF G  G +
Sbjct: 37  DWQPLREAVAGCTACALAQSRTQTVFGVGHPQAHWMIVGEAPGEQEDLRGEPFVGAAGQL 96

Query: 136 LDKMLQSIEIMR-------TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188
           LD ML+++ + R        +++I+      PP NRN +  E++ C P ++RQIEL+ P+
Sbjct: 97  LDAMLRALALSRAADGDPAQRVYIANTLKCRPPRNRNPAPDELQRCEPFLVRQIELVKPR 156

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW 248
           I+L +G           ++   +  G+          +P + T HP  L++    K   W
Sbjct: 157 IILAMGRFAVQALL-RSSEPIGKLRGRVHRYQ----GVPLVVTYHPAYLLRNLPDKARAW 211

Query: 249 HALITLKK 256
             L     
Sbjct: 212 DDLCLAAA 219


>gi|218883592|ref|YP_002427974.1| predicted Uracil-DNA glycosylase [Desulfurococcus kamchatkensis
           1221n]
 gi|218765208|gb|ACL10607.1| predicted Uracil-DNA glycosylase [Desulfurococcus kamchatkensis
           1221n]
          Length = 216

 Score =  166 bits (419), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 78/186 (41%), Gaps = 3/186 (1%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
                L + + +   C L     + +         +M IG  P + ++ +G+PF G  G 
Sbjct: 2   SEWDSLVNSILNCKRCRLSQYRRNPVPGEGNVNAGVMFIGEAPGEKEDETGRPFVGAAGK 61

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           +L ++++S    R  ++I+ I    PPGNR+  + E+E C P +++QIELI P++++ +G
Sbjct: 62  LLIELIESTGFKRGDVYITNIVKCRPPGNRDPEDDEIEACLPYLLKQIELIKPRLIVALG 121

Query: 195 NKTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
                  F              G+  N       +  + T HP   +  P +K       
Sbjct: 122 RHAARTLFRLGGLKWVNMSMMHGRPYNAVINGLQVVIIPTFHPAAALYNPGLKDELRRDF 181

Query: 252 ITLKKA 257
             + K 
Sbjct: 182 EEVIKK 187


>gi|320535746|ref|ZP_08035831.1| uracil-DNA glycosylase, family 4 [Treponema phagedenis F0421]
 gi|320147402|gb|EFW38933.1| uracil-DNA glycosylase, family 4 [Treponema phagedenis F0421]
          Length = 265

 Score =  165 bits (418), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 61/268 (22%), Positives = 107/268 (39%), Gaps = 21/268 (7%)

Query: 7   LSQEQILTIALFYADS-----GVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHS 61
           ++  + L +  F+  S     G Y + +E       E    E +   A          H 
Sbjct: 1   MTATEKLILYRFFKTSADYLRG-YALSEEEPVFVDTEIAPAEAAQQDAAPAQNPSTEPHV 59

Query: 62  PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTE-------GQDLMIIG 114
              Q       +  ++ ++   + +   C L +T +  +     E         ++M+IG
Sbjct: 60  LFQQAGQD--SRFSTMADIAQAVHACRGCGLAATRIHAVPGEGPEELSRLQNSVEVMVIG 117

Query: 115 YTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRT-QIHISMISPWHPPGNRNLSNIEMEI 173
             P   ++ +G+PF GK G +LDKML++I++ R    +I+ I    PP NR+ +  E   
Sbjct: 118 EGPGADEDKTGRPFVGKAGQLLDKMLEAIQLSRKTNCYITNIVKCRPPQNRDPAPAECAA 177

Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
           C   +  QI L  P  +L  G         N  +   +  G++ +       IP LAT H
Sbjct: 178 CAQFLEAQIRLQKPLAILVFGRCAAQ-LLLNTTEGIGKLRGRFFDYN----GIPLLATYH 232

Query: 234 PQELIQYPLIKKNTWHALITLKKALKNL 261
           P  L++   +K+  W  L   +  L  L
Sbjct: 233 PSALLRDESLKRPAWEDLKKFRTQLLQL 260


>gi|86609842|ref|YP_478604.1| uracil-DNA glycosylase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86558384|gb|ABD03341.1| uracil-DNA glycosylase, family 4 [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 206

 Score =  165 bits (417), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 11/193 (5%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
             L +LK        C L ++    +         ++IIG  P +S+++ G PF GK+G 
Sbjct: 9   RDLEQLKQHCLVCQRCDLAASRTHVVVHRGNPKARILIIGEGPGESEDLQGLPFVGKSGQ 68

Query: 135 MLDKMLQSIEI-MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
           +LDK+L S+ +      +I  +    PP NR  +  EM+ CRP ++ QI L+ P I+L  
Sbjct: 69  LLDKILASVGLDPEQDTYICNVVKCRPPNNRVPTQEEMDACRPYLLEQIRLVDPWIILLT 128

Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTW 248
           G  +             +  G+W            +   HP  L++ P       K   W
Sbjct: 129 GATSVRSLLGEKR-GITKIRGEWIQWQGRW----CMPIFHPAYLLRNPDRTPGSPKWLMW 183

Query: 249 HALITLKKALKNL 261
             +  +K+    L
Sbjct: 184 QDIQAVKQKYLEL 196


>gi|254451188|ref|ZP_05064625.1| uracil-DNA glycosylase, C-terminal domain protein [Octadecabacter
           antarcticus 238]
 gi|198265594|gb|EDY89864.1| uracil-DNA glycosylase, C-terminal domain protein [Octadecabacter
           antarcticus 238]
          Length = 264

 Score =  165 bits (417), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 61/260 (23%), Positives = 114/260 (43%), Gaps = 12/260 (4%)

Query: 12  ILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSI 70
              +  +  + G      DEP +    +  +       A   + +     +    + D I
Sbjct: 6   AKALLDWQVEMGCDEAIGDEPVDRYALKDVKPAPKPVQAPSTLASAPPPVATPAPEVDQI 65

Query: 71  AQKACSLHEL------KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNIS 124
           +    + +        ++ + +F  C L   + + + +    G  +MII   P   D+ +
Sbjct: 66  SAARDAANAAQDLAALRAAMATFEGCALKPVARNLVFSGGIAGAPVMIIADAPDRDDDRA 125

Query: 125 GKPFSGKTGNMLDKMLQSIEIMRT---QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ 181
           G+ F+G+TG +LDKML +I + R+    I+ + + PW+PP NR+    EM +  P + R 
Sbjct: 126 GEMFAGRTGALLDKMLAAIGLGRSGDAPIYAAPVLPWNPPQNRDPDAEEMAMMLPFLQRH 185

Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241
           I L +PKIL+ +GN               +  G W+++    + +P +    P  L+  P
Sbjct: 186 ITLAAPKILILMGNGPCQALLGRSG--MTRLHGSWADVQIGSASLPAIPMFAPSYLLTTP 243

Query: 242 LIKKNTWHALITLKKALKNL 261
             K+  W  L++LK  LK+L
Sbjct: 244 SAKREAWGDLLSLKARLKDL 263


>gi|119719708|ref|YP_920203.1| phage SPO1 DNA polymerase-related protein [Thermofilum pendens Hrk
           5]
 gi|119524828|gb|ABL78200.1| phage SPO1 DNA polymerase-related protein [Thermofilum pendens Hrk
           5]
          Length = 217

 Score =  164 bits (416), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 75/188 (39%), Gaps = 3/188 (1%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            +L E+   +     C L  +   T+         ++ IG  P  ++++ G+PF G  G 
Sbjct: 18  RALEEIAGEIAKCEKCPLSRSRTHTVPGEGNPCSGVVFIGEAPGRNEDLQGRPFVGAAGA 77

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           +L +++    + R ++ I+ +    PP NR     E+  C P ++ Q+  I P++++ +G
Sbjct: 78  LLTELISLAGLSREEVFITNVVKCRPPNNREPREEEIAACLPYLLAQLRAIKPRLIVTLG 137

Query: 195 NKTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
             +                   GK   +      +    T+HP   +  P ++K      
Sbjct: 138 KHSTKTILRMRGMSVDSIMSVRGKAYTVNAEWGQVTVFPTLHPAAALYNPAMRKVLEEDF 197

Query: 252 ITLKKALK 259
             L+  L+
Sbjct: 198 RFLRGLLE 205


>gi|108803352|ref|YP_643289.1| phage SPO1 DNA polymerase-like protein [Rubrobacter xylanophilus
           DSM 9941]
 gi|108764595|gb|ABG03477.1| phage SPO1 DNA polymerase-related protein [Rubrobacter xylanophilus
           DSM 9941]
          Length = 216

 Score =  164 bits (416), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 45/195 (23%), Positives = 85/195 (43%), Gaps = 17/195 (8%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
            +   L EL   +     C L  +  +T+  T      LM++G  P ++++ +G PF G+
Sbjct: 13  NREERLAELARQVSVCTRCDLSRSRTNTVFGTGDPYSPLMLVGEGPGENEDATGLPFVGR 72

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIEL 184
            G +LD +L ++ + R Q++I+ I              NR     E+  C P +  QIE 
Sbjct: 73  AGKLLDNILAAVNLSREQVYITNIVKCRAAVEENGRLRNRQPRAAEINACNPYLQAQIEA 132

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP--- 241
           + P+I+L +G        + D  +  ++ G+W  +      I  +AT HP  +++     
Sbjct: 133 VRPEIILCLGGPAAKTIIDRD-FRITRDRGRWYEV----GGIRAMATFHPAYILRQSGEE 187

Query: 242 --LIKKNTWHALITL 254
               K+  W  +  +
Sbjct: 188 LARTKRLVWKDIQNV 202


>gi|206901596|ref|YP_002251107.1| DNA polymerase, bacteriophage-type [Dictyoglomus thermophilum
           H-6-12]
 gi|206740699|gb|ACI19757.1| DNA polymerase, bacteriophage-type [Dictyoglomus thermophilum
           H-6-12]
          Length = 210

 Score =  164 bits (416), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 5/187 (2%)

Query: 73  KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
           K   L  L+    +  +C L     + +         +M IG  P   ++  G+PF G  
Sbjct: 6   KIDELEILRREAENCKNCSLWQQRTNLVFGEGNPNSSIMFIGEAPGFHEDQQGRPFVGAA 65

Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192
           G +L ++++S+ + R  I+I+ +    PP NR     E++ C P + RQIE+I+PK++  
Sbjct: 66  GRLLTELIESMGLKREDIYIANVLKCRPPNNREPLPEEIKACFPFLRRQIEIINPKVICT 125

Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
           +G         + +     + GK  +       I    T HP   + +  + +N      
Sbjct: 126 LGRYAAYAILGH-SVNISNSHGK--DYVVDGKRI--FVTYHPAAALYHGKLLENIRKDFE 180

Query: 253 TLKKALK 259
            LK+  +
Sbjct: 181 KLKELYE 187


>gi|189345810|ref|YP_001942339.1| phage SPO1 DNA polymerase-related protein [Chlorobium limicola DSM
           245]
 gi|189339957|gb|ACD89360.1| phage SPO1 DNA polymerase-related protein [Chlorobium limicola DSM
           245]
          Length = 211

 Score =  164 bits (416), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 5/202 (2%)

Query: 60  HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSD 119
            + L  +A    +   +LH L    R+   C L ST  + +         L++IG  P  
Sbjct: 8   ENELQSEAAGGEKTLTALHSLYERSRTCTKCRLASTRTNFVFGEGNPHARLVVIGEAPGA 67

Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIM 179
            ++  G+PF G++G +LDK+LQ+++  R ++ I  I    PP NRN    E+  C P ++
Sbjct: 68  DEDALGRPFVGRSGQLLDKILQAVQFRREEVFICNIIKCRPPQNRNPLQDEIASCMPWLL 127

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
            Q++L+ P +LL +G    N    N         GK             +AT HP  L++
Sbjct: 128 DQLDLLKPSMLLLLGRVAANTILQNTLSL-GAMRGKI----IRWKQFDCVATYHPAALLR 182

Query: 240 YPLIKKNTWHALITLKKALKNL 261
            P  K+  W  +  ++   + L
Sbjct: 183 NPNWKRGCWEDVQMMRHHYEML 204


>gi|313114128|ref|ZP_07799680.1| uracil-DNA glycosylase, family 4 [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310623537|gb|EFQ06940.1| uracil-DNA glycosylase, family 4 [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 191

 Score =  164 bits (416), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 6/185 (3%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
               L+S   +   C LC T  + +     E  +++ +G  P  +++  G PF G++G +
Sbjct: 2   DWETLRSSCLACTRCELCKTRTNVVFGQGVEDAEVLFVGEGPGQNEDEQGLPFVGRSGQL 61

Query: 136 LDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           LDK L +I++ R    +I+ I    PP NR+    E E C P +  Q  L+ PKI++ +G
Sbjct: 62  LDKYLFAIDLDRTKNCYIANIVKCRPPQNRDPQPAESEACMPWLREQFRLLKPKIVVCLG 121

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
                           +  G+          I  + T HP  L++ P  K   +     L
Sbjct: 122 RIAAQRMI-RKDFSVTKEHGQLYE----KGGILFMGTFHPAALLRSPQNKPAAFADFTAL 176

Query: 255 KKALK 259
           +  ++
Sbjct: 177 RDNIE 181


>gi|296125284|ref|YP_003632536.1| phage SPO1 DNA polymerase-related protein [Brachyspira murdochii
           DSM 12563]
 gi|296017100|gb|ADG70337.1| phage SPO1 DNA polymerase-related protein [Brachyspira murdochii
           DSM 12563]
          Length = 252

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 91/221 (41%), Gaps = 4/221 (1%)

Query: 43  EKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCH-LCSTSLSTIC 101
                +        ++I +  ++    I  K   L ++ + +     C  LC++ L+ + 
Sbjct: 31  RNPKKAQQAVKKEEKNITNKGIELMKEI--KNEDLKKIYNEVEKCMKCEALCNSRLNVVF 88

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E  D++ +G  P   ++  G PF G+ G +LDK ++ + I + + +I       PP
Sbjct: 89  GRGDEEPDIVFVGEAPGADEDKQGLPFVGRGGKLLDKWIEKMNINKEKYYIMNALKCRPP 148

Query: 162 GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND-AQKTYQNLGKWSNLC 220
            NR+    E   CR   +RQ+++++PKI+  +G        + D      +   K     
Sbjct: 149 ENRDPLPEEKANCRDFFVRQLQILNPKIICALGRHGFGNLIDFDLKTPFGKARNKVHYYS 208

Query: 221 TPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
                +P +AT HP  +++    +      L  +   L+ +
Sbjct: 209 NNGKDVPVIATYHPAYILRNQKEEDKVISDLEFMLSELEKI 249


>gi|222099134|ref|YP_002533702.1| Phage SPO1 DNA polymerase-related protein [Thermotoga neapolitana
           DSM 4359]
 gi|221571524|gb|ACM22336.1| Phage SPO1 DNA polymerase-related protein [Thermotoga neapolitana
           DSM 4359]
          Length = 192

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 80/186 (43%), Gaps = 5/186 (2%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           +  +K  +     C L  T  + +         ++ +G  P + ++ +G+PF G+ G +L
Sbjct: 9   METVKERVERCTACPLHLTRTNVVVGEGNLDTKIVFVGEGPGEEEDKTGRPFVGRAGMLL 68

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++L  + I R  ++I  +    PP NR  +  EM  C   ++ QIE+I+P +++ +G  
Sbjct: 69  TELLNEVGIKREDVYICNVVKCRPPNNRTPTTEEMFACGHFLLAQIEIINPSVVVALGAT 128

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL--IKKNTWHALITL 254
             +FF +       +  G   +          + T HP  L++     ++K     L   
Sbjct: 129 ALSFFMDGKKVSITKVRGNPMDWL---GGKKIVPTFHPSYLLRNRSKELRKIVLEDLEKA 185

Query: 255 KKALKN 260
           K  +K 
Sbjct: 186 KSFIKE 191


>gi|284162809|ref|YP_003401432.1| phage SPO1 DNA polymerase-related protein [Archaeoglobus profundus
           DSM 5631]
 gi|284012806|gb|ADB58759.1| phage SPO1 DNA polymerase-related protein [Archaeoglobus profundus
           DSM 5631]
          Length = 199

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 87/187 (46%), Gaps = 3/187 (1%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L +++  +R    C L     + +         ++ IG  P   +++ G+PF GK G  L
Sbjct: 3   LEDVEGEIRKCRKCKLWKYKTNYVPGEGNPNAKIVFIGEAPGKEEDLQGRPFVGKAGKYL 62

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++L+ + + R+ ++I+ +    PP NR+    E+E C+P ++RQ+E+I P +++ +G  
Sbjct: 63  TEVLKKLGVERSDVYITNVLKCRPPNNRDPKPEEIEACKPHLLRQLEIIKPDVIVCLGRF 122

Query: 197 TKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253
           + +          +   ++ GK  ++     ++  + T HP  +++   +       L  
Sbjct: 123 SSDVILNEFGIGFRGISRDRGKVFDVEKWGKVVKIIPTYHPAAVLRNKSLADYFESDLKK 182

Query: 254 LKKALKN 260
             + LK 
Sbjct: 183 AVEVLKK 189


>gi|254168341|ref|ZP_04875186.1| uracil-DNA glycosylase, family 4 [Aciduliprofundum boonei T469]
 gi|289595797|ref|YP_003482493.1| phage SPO1 DNA polymerase-related protein [Aciduliprofundum boonei
           T469]
 gi|197622622|gb|EDY35192.1| uracil-DNA glycosylase, family 4 [Aciduliprofundum boonei T469]
 gi|289533584|gb|ADD07931.1| phage SPO1 DNA polymerase-related protein [Aciduliprofundum boonei
           T469]
          Length = 191

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 46/187 (24%), Positives = 86/187 (45%), Gaps = 8/187 (4%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            SL +++  ++    C L  T  + +       + +M +G  P   ++  G+PF G  G 
Sbjct: 10  DSLEKIEKEIKECKKCPLYKTRKNAVPGEGGFQRRIMFVGEAPGRREDELGRPFVGAAGK 69

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
            LD++L SI + R  ++I+ I    PPGNR+ ++ E+++C P + RQI ++ P+I+  +G
Sbjct: 70  FLDELLASIGLSRKDVYITNIVKCRPPGNRDPTDEEIKLCSPYLDRQIAIMKPRIICPLG 129

Query: 195 NKTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
             +  +       +  K  +  GK          I  L   HP   + +  +K   + + 
Sbjct: 130 RFSAKYILEKFGFEMGKISKIQGKVFE-----GNILILPMYHPAAALYHQNLKSELYKSF 184

Query: 252 ITLKKAL 258
             LK  L
Sbjct: 185 EVLKSLL 191


>gi|118445103|ref|YP_879168.1| phage SPO1 DNA polymerase-related protein [Clostridium novyi NT]
 gi|118135559|gb|ABK62603.1| phage SPO1 DNA polymerase-related protein [Clostridium novyi NT]
          Length = 190

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 46/186 (24%), Positives = 79/186 (42%), Gaps = 6/186 (3%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             EL       H+C L       +        +LM IG  P   ++ +GKPF GK G +L
Sbjct: 9   WRELYKECIECHNCELGDKRTHMVFGEGNPKANLMFIGEAPGADEDRTGKPFVGKAGQLL 68

Query: 137 DKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
            K L ++++ R    +I+ I    P  NRN  + E   C   +  Q+ LI PKI++ +G 
Sbjct: 69  TKGLMALDLYRDRDYYITNICKCRPENNRNPMDHEAYACIQYLRNQVALIKPKIIVCLGA 128

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
            +  +  + D  +  ++ GKW         +  +   HP  +++    K   W  L  +K
Sbjct: 129 VSGKYIIDKDL-RITRDRGKWIE----KKGVYIMPIFHPAAILRDDNKKPLFWGDLKEIK 183

Query: 256 KALKNL 261
           +    +
Sbjct: 184 RKYLEI 189


>gi|320100863|ref|YP_004176455.1| phage SPO1 DNA polymerase-like protein [Desulfurococcus mucosus DSM
           2162]
 gi|319753215|gb|ADV64973.1| phage SPO1 DNA polymerase-related protein [Desulfurococcus mucosus
           DSM 2162]
          Length = 216

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 81/190 (42%), Gaps = 4/190 (2%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
                L + + S   C L     + +         +M++G  P + ++ +G+PF G  G 
Sbjct: 2   DEWGSLVNSILSCKRCRLSEHRKNPVPGEGDTNSRVMLVGEAPGEREDETGRPFVGAAGK 61

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           +L ++++SI   R  ++I+ +    PP NR+  + E++ C P +++QIEL+ P++++ +G
Sbjct: 62  LLTELIESIGFKRESLYITNVVKCRPPNNRDPEDDEIKACLPYLLKQIELLKPRVIVALG 121

Query: 195 NKTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
                  F              GK  N          + T HP   +  P +K       
Sbjct: 122 RHAARTLFELGGLKWVNMSSMHGKAFNAVINGVHTVIIPTFHPAAALYNPGLKDELRKDF 181

Query: 252 I-TLKKALKN 260
              ++K ++ 
Sbjct: 182 EGVIRKHIEE 191


>gi|294054594|ref|YP_003548252.1| phage SPO1 DNA polymerase-related protein [Coraliomargarita
           akajimensis DSM 45221]
 gi|293613927|gb|ADE54082.1| phage SPO1 DNA polymerase-related protein [Coraliomargarita
           akajimensis DSM 45221]
          Length = 349

 Score =  164 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 53/244 (21%), Positives = 97/244 (39%), Gaps = 16/244 (6%)

Query: 26  WVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACS-LHELKSLL 84
            VF          S+    +  +A+     +     P   + D     A S L  L+  +
Sbjct: 95  AVFQSLIKSTQSSSEIPASAEPTAVLKPQVVHAAQLPPPPKIDLPEGDAKSQLAWLRERV 154

Query: 85  RSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142
                C+  L       +    +   D+   G  P   + I+G+PF GK G +L K++ +
Sbjct: 155 EQCETCNSNLNLDGR-IVFGEGSPNADIFFCGEAPGADEEIAGQPFVGKAGQLLTKIISA 213

Query: 143 IEIMRTQIHISMISPWH-----PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197
           + + R  ++I  I  W      P GNR  +  EM  C P +  Q+E+I PK+++ +GN  
Sbjct: 214 MGLSREDVYIGNILKWRPQHDKPYGNRPPTEDEMNFCLPYLKAQLEIIQPKVIVALGNTA 273

Query: 198 KNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI--KKNTWHALITL 254
            +     D  +   Q  G W +          + T HP  L++   +  K+  W  ++ +
Sbjct: 274 VSGLLGQDPNRRLGQVRGNWHDFN----GTDLMITFHPSYLLRNDTMKTKRLVWEDMLKV 329

Query: 255 KKAL 258
            + +
Sbjct: 330 MERI 333


>gi|210631731|ref|ZP_03296973.1| hypothetical protein COLSTE_00858 [Collinsella stercoris DSM 13279]
 gi|210159851|gb|EEA90822.1| hypothetical protein COLSTE_00858 [Collinsella stercoris DSM 13279]
          Length = 235

 Score =  164 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 5/184 (2%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           SL E++S+L     C LC T  + +         +M +G  P  ++++ G+PF G+ G  
Sbjct: 18  SLEEIRSVLGECRLCELCQTRTNIVFGVGNPHARVMFVGEAPGKNEDLRGEPFVGRAGEN 77

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           L+ +L    + R  I+I+ +    PPGNRN    E+  C P +  QI  I P I++ +GN
Sbjct: 78  LNGILSLAGLKREDIYIANVLKCRPPGNRNPKADEVLACSPFLREQIRSIWPDIIVTLGN 137

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
              +F    +     +  G++  +         + T HP   ++ P  ++        L 
Sbjct: 138 PATHFVLKTE-VGITKLRGRFHEM----GHFVVMPTFHPAAALRNPAWQELLEADFRMLG 192

Query: 256 KALK 259
             L+
Sbjct: 193 DYLE 196


>gi|86606890|ref|YP_475653.1| uracil-DNA glycosylase [Synechococcus sp. JA-3-3Ab]
 gi|86555432|gb|ABD00390.1| uracil-DNA glycosylase, family 4 [Synechococcus sp. JA-3-3Ab]
          Length = 206

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 48/193 (24%), Positives = 81/193 (41%), Gaps = 11/193 (5%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
             L +L+   R    C L +     +         ++IIG  P + +++ G PF GK+G 
Sbjct: 9   RELEQLEQHCRVCQRCELAANRTHVVVHRGNPKARILIIGEGPGEQEDLQGLPFVGKSGQ 68

Query: 135 MLDKMLQSIEIM-RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
           +LDK+L S+ +      +I  +    PP NR  +  EM+ CRP ++ QI L+ P I+L  
Sbjct: 69  LLDKILASVGLDSERDTYICNVVKCRPPNNRVPTQEEMDACRPYLLEQIRLVDPWIILLT 128

Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTW 248
           G  +       D +   +  G+W            +   HP  L++ P       K   W
Sbjct: 129 GATSVRSLLG-DKRGITKIRGEWIQWQGRW----CMPIFHPAYLLRNPDRTPGSPKWLMW 183

Query: 249 HALITLKKALKNL 261
             +  +K+    L
Sbjct: 184 QDIQAVKQKYLEL 196


>gi|254168263|ref|ZP_04875109.1| uracil-DNA glycosylase, family 4 [Aciduliprofundum boonei T469]
 gi|197622772|gb|EDY35341.1| uracil-DNA glycosylase, family 4 [Aciduliprofundum boonei T469]
          Length = 191

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 46/187 (24%), Positives = 86/187 (45%), Gaps = 8/187 (4%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            SL +++  ++    C L  T  + +       + +M +G  P   ++  G+PF G  G 
Sbjct: 10  DSLEKIEKEIKECKKCPLYKTRKNAVPGEGGFQRRIMFVGEAPGRREDELGRPFVGSAGK 69

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
            LD++L SI + R  ++I+ I    PPGNR+ ++ E+++C P + RQI ++ P+I+  +G
Sbjct: 70  FLDELLASIGLSRKDVYITNIVKCRPPGNRDPTDEEIKLCSPYLDRQIAIMKPRIICPLG 129

Query: 195 NKTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
             +  +       +  K  +  GK          I  L   HP   + +  +K   + + 
Sbjct: 130 RFSAKYILEKFGFEIGKISKIQGKVFE-----GNILILPMYHPAAALYHQNLKTELYKSF 184

Query: 252 ITLKKAL 258
             LK  L
Sbjct: 185 EVLKSLL 191


>gi|315231723|ref|YP_004072159.1| uracil-DNA glycosylase [Thermococcus barophilus MP]
 gi|315184751|gb|ADT84936.1| uracil-DNA glycosylase [Thermococcus barophilus MP]
          Length = 194

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 46/187 (24%), Positives = 89/187 (47%), Gaps = 3/187 (1%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           + +L+  +R+   C L +   + +  + +    +M +G  P   ++  G PF G+ G +L
Sbjct: 7   MKKLEERIRNCKKCPLSALRTNAVPGSGSYDAKVMFVGEAPGYWEDQKGLPFVGRAGKVL 66

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           D++L  I + R  ++I+ I    PP NR+ +  E++ C P + RQI++I PKI++ +G  
Sbjct: 67  DELLSEIGLKREDVYITNIVKCRPPNNRDPNEDEIKACSPYLDRQIDIIRPKIIVPLGRH 126

Query: 197 TKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253
           + ++       +A+   +  GK     T    +  +   HP   +  P +K+        
Sbjct: 127 SMSYILRKFGFEAEPISRIHGKTFEARTLFGKVIIMPMYHPAVALYRPQLKEELRKDFKK 186

Query: 254 LKKALKN 260
           LK  L N
Sbjct: 187 LKNVLMN 193


>gi|255070667|ref|XP_002507415.1| predicted protein [Micromonas sp. RCC299]
 gi|226522690|gb|ACO68673.1| predicted protein [Micromonas sp. RCC299]
          Length = 248

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 51/241 (21%), Positives = 94/241 (39%), Gaps = 11/241 (4%)

Query: 28  FDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQ-ADSIAQKACSLHELKSLLRS 86
              P   A+       +S   ++ P    R +    +   AD+ +    SL EL   LRS
Sbjct: 5   LALPRALASALPLGNHRSSPRSVPPRAPPRWVRPRALASDADARSPSFSSLDELAHHLRS 64

Query: 87  FHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIE-I 145
                L S     +         +MIIG  P   ++  G PF G+ G +LD++  S+   
Sbjct: 65  LTGDPLESDGGRIVTFRGDTNARVMIIGEAPGAEEDKLGVPFVGRAGKLLDEIFASVTLS 124

Query: 146 MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                +++ +    P  NR+ +  E+E  R  +  +I L+ P I++  G  +       +
Sbjct: 125 TDRHCYVTNVVKRRPLNNRDPTAREIEWYRGYLREEIRLLDPAIIVCTGRHSMRTLLGKN 184

Query: 206 AQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWHALITLKKALKN 260
            +   +  G+W ++         +   HP  L++ P       K  TW  +  +K+ +  
Sbjct: 185 CEGITKIRGRWFDV----DGRVVMPMFHPSYLLRNPQKTPGSPKALTWDDIREVKRKVDE 240

Query: 261 L 261
           L
Sbjct: 241 L 241


>gi|294101873|ref|YP_003553731.1| phage SPO1 DNA polymerase-related protein [Aminobacterium
           colombiense DSM 12261]
 gi|293616853|gb|ADE57007.1| phage SPO1 DNA polymerase-related protein [Aminobacterium
           colombiense DSM 12261]
          Length = 212

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 15/208 (7%)

Query: 59  IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPS 118
                +++A  +A       EL   + S   C L  T +ST+         LM++G  P 
Sbjct: 9   PTGEDIKEAQKLA-----WKELIQQISSCGKCGLHKTRVSTVPGEGNTKTHLMLVGEGPG 63

Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPII 178
           + ++  GKPF GK G +L K+L++  I R  ++I+ +    PP NR  +  EM  C   +
Sbjct: 64  EEEDEQGKPFVGKAGQLLTKILKAAGISRKDVYITNVVKCRPPHNRVPAIEEMMTCNMYL 123

Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238
             QI LI P I+L +GN    +F    ++      G+W         I  +   HP  L+
Sbjct: 124 EAQIALIRPSIILCLGNTPTKWFLK-TSEGISNLRGRWF----KWRGIDLMPIFHPSYLL 178

Query: 239 QYPLIKK-----NTWHALITLKKALKNL 261
           +    KK      TW  +  +K+ L  L
Sbjct: 179 RNESRKKGSPKDLTWQDIRAVKEKLDQL 206


>gi|160945470|ref|ZP_02092696.1| hypothetical protein FAEPRAM212_02996 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443201|gb|EDP20206.1| hypothetical protein FAEPRAM212_02996 [Faecalibacterium prausnitzii
           M21/2]
          Length = 193

 Score =  163 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 46/187 (24%), Positives = 81/187 (43%), Gaps = 6/187 (3%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
            +  LK+   +   C LC+T  + +        +++ +G  P  S++  G PF G++G +
Sbjct: 5   DMDTLKAECLACTRCELCATRTNVVFGQGVPDAEVLFVGEGPGQSEDEQGLPFVGRSGQL 64

Query: 136 LDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           LDK L +I++ R    +I+ I    PP NR+    E E C P +  Q  L+ PKI++ +G
Sbjct: 65  LDKYLFAIDLDRKKNCYIANIVKCRPPQNRDPLPAESEACMPWLREQFRLLHPKIVVCLG 124

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
                     D     +  G+          I  + T HP  L++ P  K   +     L
Sbjct: 125 RVAAQRMIRQDFSV-TREHGQIIE----KGGILFMGTFHPAALLRQPQNKPEAFADFTVL 179

Query: 255 KKALKNL 261
           +  +  +
Sbjct: 180 RDTIAAV 186


>gi|295105370|emb|CBL02914.1| uracil-DNA glycosylase, family 4 [Faecalibacterium prausnitzii
           SL3/3]
          Length = 190

 Score =  162 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 46/187 (24%), Positives = 81/187 (43%), Gaps = 6/187 (3%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
            +  LK+   +   C LC+T  + +        +++ +G  P  S++  G PF G++G +
Sbjct: 2   DMDTLKAECLACTRCELCATRTNVVFGQGVPDAEVLFVGEGPGQSEDEQGLPFVGRSGQL 61

Query: 136 LDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           LDK L +I++ R    +I+ I    PP NR+    E E C P +  Q  L+ PKI++ +G
Sbjct: 62  LDKYLFAIDLDRKKNCYIANIVKCRPPQNRDPLPAESEACMPWLREQFRLLHPKIVVCLG 121

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
                     D     +  G+          I  + T HP  L++ P  K   +     L
Sbjct: 122 RVAAQRMIRQDFSV-TREHGQIIE----KGGILFMGTFHPAALLRQPQNKPEAFADFTVL 176

Query: 255 KKALKNL 261
           +  +  +
Sbjct: 177 RDTIAAV 183


>gi|159042210|ref|YP_001541462.1| phage SPO1 DNA polymerase-related protein [Caldivirga
           maquilingensis IC-167]
 gi|157921045|gb|ABW02472.1| phage SPO1 DNA polymerase-related protein [Caldivirga
           maquilingensis IC-167]
          Length = 209

 Score =  162 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 79/182 (43%), Gaps = 3/182 (1%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
             L E+ S + +   C L  +    +        ++M+IG  P   ++ +G+PF G  G 
Sbjct: 11  DELAEINSEVSNCRKCPLYLSRKKAVPGEGNPRAEVMLIGEAPGRVEDETGRPFVGAAGK 70

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           +LD++L  I + R  ++I+ +    PP NR+ +  E+  C+P ++RQI ++ P+ ++ +G
Sbjct: 71  LLDELLHEIGVDRGNLYITNVVKCRPPNNRDPTEEEINACKPYLIRQIAVVRPRKIITLG 130

Query: 195 NKTKNFFFNNDAQKTY---QNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
             +     + +        +  GK   +           T HP   +  P ++      L
Sbjct: 131 RHSTRVILSLNGLGFSELAKVRGKVFKVNIAGVNADVYPTYHPAAALYNPSVRNLIKEDL 190

Query: 252 IT 253
             
Sbjct: 191 AK 192


>gi|295317544|gb|ADF97921.1| uracil-DNA glycosylase [Clostridium botulinum F str. 230613]
          Length = 174

 Score =  162 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 6/169 (3%)

Query: 94  STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRT-QIHI 152
               + +         +M IG  P   ++ +G+PF GK G +L K L +++  R    +I
Sbjct: 5   KNRTNMVFGEGNISAPIMFIGEAPGADEDRTGRPFVGKAGQLLTKALLALDFKRDEHYYI 64

Query: 153 SMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN 212
             +    P  NR     E   C P +  Q+ L+ PKI++ +G     +    +  +  ++
Sbjct: 65  CNVCKCRPENNRTPKEEEAMTCLPYLRNQVALVKPKIMICLGATALKYIMG-EQFRITRD 123

Query: 213 LGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
            GKW            +AT HP  L +    KK  W  L ++++    L
Sbjct: 124 RGKWIE----RKGYYIMATFHPAALFRDESKKKLLWQDLKSIREKYDEL 168


>gi|297527109|ref|YP_003669133.1| phage SPO1 DNA polymerase-related protein [Staphylothermus
           hellenicus DSM 12710]
 gi|297256025|gb|ADI32234.1| phage SPO1 DNA polymerase-related protein [Staphylothermus
           hellenicus DSM 12710]
          Length = 212

 Score =  162 bits (411), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 44/188 (23%), Positives = 87/188 (46%), Gaps = 3/188 (1%)

Query: 74  ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
              L  L   ++    C L  +  + +        D+M +G  P   ++ +G+PF G  G
Sbjct: 6   CNELARLAEEIKKCRKCTLYLSRKNAVPGEGPCNADVMFVGEAPGSKEDETGRPFVGAAG 65

Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
            +L ++L+ I + R+ ++I+ +    PP NR+ +  E+E C P ++RQI++I PKI++ +
Sbjct: 66  KLLMQLLELIGLKRSDVYITNVVKCRPPNNRDPTPEEIEACSPYLIRQIKIIKPKIIVAL 125

Query: 194 GNKTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
           G  +  F F           +  GK  +       +  +AT HP   +  P ++ +  + 
Sbjct: 126 GRHSARFLFSRAGLKWSNMRRMHGKVFSARIDGVEVKIMATYHPAAALYSPKLRPDLEND 185

Query: 251 LITLKKAL 258
              L+  +
Sbjct: 186 FRVLESLI 193


>gi|146304819|ref|YP_001192135.1| phage SPO1 DNA polymerase-like protein [Metallosphaera sedula DSM
           5348]
 gi|145703069|gb|ABP96211.1| phage SPO1 DNA polymerase-related protein [Metallosphaera sedula
           DSM 5348]
          Length = 211

 Score =  162 bits (410), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 4/184 (2%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            SL ++ + + + H C L  T    +        D++ +G  P   ++ +G+PF G  G 
Sbjct: 2   SSLQDISNQVIACHKCSLSRTRTHAVPGEGNPTSDVVFVGEAPGAKEDETGRPFVGSAGQ 61

Query: 135 MLDKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
           +L ++++      R++I+I+ I    PP NR+    E+E C P ++ QI LI PK+++ +
Sbjct: 62  LLTELIRKYLRRDRSEIYITNIVKCRPPNNRDPEKEEIEACSPYLLTQIRLIKPKVIVTL 121

Query: 194 GNKTK---NFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
           G  +                +  GK  +L   +  +    T HP   +  P +K++    
Sbjct: 122 GRHSTGFFQTLAGLPLTPISRCHGKPFHLDLGYGTVTVFPTYHPAAALYNPPLKRDLEED 181

Query: 251 LITL 254
              L
Sbjct: 182 FQRL 185


>gi|225849981|ref|YP_002730215.1| uracil-DNA glycosylase family 4 protein [Persephonella marina
           EX-H1]
 gi|225645579|gb|ACO03765.1| uracil-DNA glycosylase family 4 protein [Persephonella marina
           EX-H1]
          Length = 216

 Score =  162 bits (410), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 45/185 (24%), Positives = 80/185 (43%), Gaps = 5/185 (2%)

Query: 69  SIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128
            I +K   + ++   +++  +C L  +    +         LM IG  P   ++  G+PF
Sbjct: 29  DIKEKEKLMSQINEQIQNCTNCDLYKSRTQAVLGEGNLNAKLMFIGEAPGGEEDKQGRPF 88

Query: 129 SGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188
            G+ G +L K++++    R   +I+ I    PPGNR  +  EME C P + +QIE+I PK
Sbjct: 89  VGRAGKLLTKLIEAAGYRREDFYIANICKCRPPGNRTPTPWEMERCFPYLKKQIEIIDPK 148

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW 248
           +L  +G      F N +     +  G   N            T HP  +++ P  +   +
Sbjct: 149 VLCLLGATAGRAFLNRN-VAITKERGSIINWE----GRILYLTFHPAYVLRNPDAEITLF 203

Query: 249 HALIT 253
             +  
Sbjct: 204 EDIKK 208


>gi|240103871|ref|YP_002960180.1| Uracil-DNA glycosylase [Thermococcus gammatolerans EJ3]
 gi|239911425|gb|ACS34316.1| Uracil-DNA glycosylase [Thermococcus gammatolerans EJ3]
          Length = 196

 Score =  162 bits (410), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 43/188 (22%), Positives = 86/188 (45%), Gaps = 3/188 (1%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           + +L+  +R+   C L     + +  + +    +M +G  P   ++  G PF G+ G +L
Sbjct: 9   MRKLEEKIRNCRKCPLGQLRTNAVPGSGSYDAKVMFVGEAPGYWEDQKGLPFVGRAGKVL 68

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           D++L+ I + R  ++I+ I    PP NR+ +  E+  C P +  QI++I PK+++ +G  
Sbjct: 69  DELLEGIGLSRDDVYITNIVKCRPPENRDPTEEEIRACSPYLDMQIDIIRPKVIVPLGRH 128

Query: 197 TKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253
           +  +       + +   +  GK     T    I  +   HP   +  P +++        
Sbjct: 129 SMGYLLRKFGFEPEPISKIHGKVFRANTLFGRIIIMPMYHPAAALYKPPLREELRKDFEK 188

Query: 254 LKKALKNL 261
           L+K L  L
Sbjct: 189 LRKILNEL 196


>gi|48425936|pdb|1VK2|A Chain A, Crystal Structure Of Uracil-Dna Glycosylase (Tm0511) From
           Thermotoga Maritima At 1.90 A Resolution
          Length = 204

 Score =  162 bits (409), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 75/181 (41%), Gaps = 5/181 (2%)

Query: 82  SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
             ++    C L     + +         ++ +G  P + ++ +G+PF G+ G +L ++L+
Sbjct: 25  ERVKKCTACPLHLNRTNVVVGEGNLDTRIVFVGEGPGEEEDKTGRPFVGRAGXLLTELLR 84

Query: 142 SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
              I R  ++I  +    PP NR  +  E   C   ++ QIE+I+P +++ +G    +FF
Sbjct: 85  ESGIRREDVYICNVVKCRPPNNRTPTPEEQAACGHFLLAQIEIINPDVIVALGATALSFF 144

Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI--KKNTWHALITLKKALK 259
            +       +  G   +          + T HP  L++      ++     +   K  +K
Sbjct: 145 VDGKKVSITKVRGNPIDWL---GGKKVIPTFHPSYLLRNRSNELRRIVLEDIEKAKSFIK 201

Query: 260 N 260
            
Sbjct: 202 K 202


>gi|242398863|ref|YP_002994287.1| Uracil-DNA glycosylase [Thermococcus sibiricus MM 739]
 gi|242265256|gb|ACS89938.1| Uracil-DNA glycosylase [Thermococcus sibiricus MM 739]
          Length = 194

 Score =  162 bits (409), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 48/191 (25%), Positives = 88/191 (46%), Gaps = 3/191 (1%)

Query: 73  KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
           K+ S+  L+  +     C L     + +  + +    +M +G  P   ++  G PF G+ 
Sbjct: 4   KSESMKRLEERIIKCRKCPLGELRTNAVPGSGSYESKVMFVGEGPGYWEDQEGLPFVGRA 63

Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192
           G +LD++L+SI + R +++I+ I    PP NR+ +  E++ C P +  QI+LI PKI++ 
Sbjct: 64  GKVLDELLESIGLTRDKVYITNIVKCRPPNNRDPTEEEVKACSPYLDMQIDLIRPKIIVP 123

Query: 193 IGNKTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249
           +G  +  +       D +   +  GK     T    I  +   HP   +  P +K+    
Sbjct: 124 LGRHSMAYILRKFGFDPEPISKIHGKTFEARTLFGKIVIMPVYHPAVALYRPQLKEELQQ 183

Query: 250 ALITLKKALKN 260
               LK   +N
Sbjct: 184 DFKKLKDFYRN 194


>gi|15643277|ref|NP_228321.1| hypothetical protein TM0511 [Thermotoga maritima MSB8]
 gi|31615491|pdb|1L9G|A Chain A, Crystal Structure Of Uracil-Dna Glycosylase From T.
           Maritima
 gi|4981023|gb|AAD35596.1|AE001727_8 conserved hypothetical protein [Thermotoga maritima MSB8]
          Length = 192

 Score =  162 bits (409), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 75/181 (41%), Gaps = 5/181 (2%)

Query: 82  SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
             ++    C L     + +         ++ +G  P + ++ +G+PF G+ G +L ++L+
Sbjct: 13  ERVKKCTACPLHLNRTNVVVGEGNLDTRIVFVGEGPGEEEDKTGRPFVGRAGMLLTELLR 72

Query: 142 SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
              I R  ++I  +    PP NR  +  E   C   ++ QIE+I+P +++ +G    +FF
Sbjct: 73  ESGIRREDVYICNVVKCRPPNNRTPTPEEQAACGHFLLAQIEIINPDVIVALGATALSFF 132

Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI--KKNTWHALITLKKALK 259
            +       +  G   +          + T HP  L++      ++     +   K  +K
Sbjct: 133 VDGKKVSITKVRGNPIDWL---GGKKVIPTFHPSYLLRNRSNELRRIVLEDIEKAKSFIK 189

Query: 260 N 260
            
Sbjct: 190 K 190


>gi|148269551|ref|YP_001244011.1| phage SPO1 DNA polymerase-related protein [Thermotoga petrophila
           RKU-1]
 gi|170288227|ref|YP_001738465.1| phage SPO1 DNA polymerase-related protein [Thermotoga sp. RQ2]
 gi|281411730|ref|YP_003345809.1| phage SPO1 DNA polymerase-related protein [Thermotoga naphthophila
           RKU-10]
 gi|147735095|gb|ABQ46435.1| phage SPO1 DNA polymerase-related protein [Thermotoga petrophila
           RKU-1]
 gi|170175730|gb|ACB08782.1| phage SPO1 DNA polymerase-related protein [Thermotoga sp. RQ2]
 gi|281372833|gb|ADA66395.1| phage SPO1 DNA polymerase-related protein [Thermotoga naphthophila
           RKU-10]
          Length = 193

 Score =  162 bits (409), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 74/181 (40%), Gaps = 5/181 (2%)

Query: 82  SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
             ++    C L     + +         ++ +G  P + ++ +G+PF G+ G +L ++L+
Sbjct: 13  ERVKKCTACPLHLNRTNVVVGEGNLDTRIVFVGEGPGEEEDKTGRPFVGRAGMLLTELLR 72

Query: 142 SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
              I R  ++I  +    PP NR  +  E   C   ++ QIE+I+P +++ +G    +F 
Sbjct: 73  ESGIRREDVYICNVVKCRPPNNRTPTPEEQAACGHFLLAQIEIINPDVIVALGATALSFL 132

Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI--KKNTWHALITLKKALK 259
            +       +  G   +          + T HP  L++      +K     +   K  +K
Sbjct: 133 MDGKKVSITKIRGNPIDWLAGK---KVIPTFHPSYLLRNRSNELRKIVLEDIEKAKSFIK 189

Query: 260 N 260
            
Sbjct: 190 K 190


>gi|11499858|ref|NP_071102.1| DNA polymerase [Archaeoglobus fulgidus DSM 4304]
 gi|2648243|gb|AAB88977.1| DNA polymerase, bacteriophage-type [Archaeoglobus fulgidus DSM
           4304]
          Length = 199

 Score =  161 bits (408), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 84/183 (45%), Gaps = 3/183 (1%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            SL ++   + S   C L  T  + +     E  +++ +G  P   +++ G+PF G  G 
Sbjct: 2   ESLDDIVREIMSCRKCDLHKTKTNYVPGVGNEKAEIVFVGEAPGRDEDLKGEPFVGAAGK 61

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           +L +ML SI + R  ++I+ +    PP NR+ +  E+E C   ++RQ+E I P +++ +G
Sbjct: 62  LLTEMLASIGLRREDVYITNVLKCRPPNNRDPTPEEVEKCGDYLVRQLEAIRPNVIVCLG 121

Query: 195 NKTKNF---FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
                F    F+ +     +  GK   +      +  +A  HP  ++  P +++      
Sbjct: 122 RFAAQFIFNLFDLEFTTISRVKGKVYEVERWGKKVKVIAIYHPAAVLYRPQLREEYESDF 181

Query: 252 ITL 254
             +
Sbjct: 182 KKI 184


>gi|218516704|ref|ZP_03513544.1| probable DNA-directed DNA polymerase protein (uracil-DNA
           glycosylase) [Rhizobium etli 8C-3]
          Length = 183

 Score =  161 bits (408), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 66/179 (36%), Positives = 105/179 (58%), Gaps = 1/179 (0%)

Query: 83  LLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142
            + +F+ C+L  ++ STI A+      +M+IG  PS  D+  G PFSGK+G + DKML +
Sbjct: 1   AIEAFNGCNLKHSARSTIFASGDAESGIMVIGSAPSAEDDREGLPFSGKSGQLFDKMLAA 60

Query: 143 IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202
           I + R+ + ++ + PW PPGNR  S  E++ICRP I RQI L  P+ +L +GN    FF 
Sbjct: 61  IGLNRSSVLLTQVIPWRPPGNRAASAAEIDICRPFIERQIALAEPQAILLLGNFAARFFL 120

Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
             +        G+W ++      IP +A++HPQ+L+  P+ K+  W+ L+  +  LK+L
Sbjct: 121 GENDTIHG-LRGRWKDIVIADRAIPAIASLHPQDLLTAPVNKRLAWNDLLAFQAKLKSL 178


>gi|303242850|ref|ZP_07329314.1| phage SPO1 DNA polymerase-related protein [Acetivibrio
           cellulolyticus CD2]
 gi|302589596|gb|EFL59380.1| phage SPO1 DNA polymerase-related protein [Acetivibrio
           cellulolyticus CD2]
          Length = 189

 Score =  161 bits (408), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 5/186 (2%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           +  EL +     ++C L     + +         L++IG  P + +++ G PF G  G +
Sbjct: 3   NWEELINSCTGCYNCQLGRKRNNIVIGRGNRNASLLMIGEGPGEQEDLQGLPFVGAAGKL 62

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           LD +L++  I   Q +I+ +    PPGNR  ++ E E C P +  Q+ LI PKI++ +G 
Sbjct: 63  LDLLLKAQMIKEDQYYIANVVKCRPPGNRVPTDEEAEKCLPYLRNQVYLIKPKIIVCLGA 122

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
               +  + +A +  Q  G+W            + T HP  L++    K   W  +  +K
Sbjct: 123 TAMKYVVDKNA-RITQIRGQWIE----RKGYWIMPTFHPAALLRDESKKILMWEDIKKVK 177

Query: 256 KALKNL 261
           + +  L
Sbjct: 178 QRMDCL 183


>gi|126466206|ref|YP_001041315.1| phage SPO1 DNA polymerase-related protein [Staphylothermus marinus
           F1]
 gi|126015029|gb|ABN70407.1| phage SPO1 DNA polymerase-related protein [Staphylothermus marinus
           F1]
          Length = 212

 Score =  161 bits (408), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 43/195 (22%), Positives = 89/195 (45%), Gaps = 3/195 (1%)

Query: 70  IAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129
            +     L +L   ++    C L  +  + +        ++M +G  P   ++  G+PF 
Sbjct: 2   ASNDCAELTKLAEEIKKCQKCPLHLSRKNAVPGEGPCNAEIMFVGEAPGSKEDEIGRPFV 61

Query: 130 GKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189
           G  G +L ++L+ I + R  ++I+ +    PP NR+ +  E+E C P ++RQI++I PKI
Sbjct: 62  GAAGKLLTQLLELIGLKRPDVYITNVVKCRPPNNRDPTPEEIEACSPYLIRQIKIIKPKI 121

Query: 190 LLFIGNKTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKN 246
           ++ +G  +  F F              GK  +       +  +AT HP   +  P ++  
Sbjct: 122 IVALGRHSARFLFSRAGLKWSNMKAMHGKVFSARIDGVEVKIMATYHPAAALYSPKLRPE 181

Query: 247 TWHALITLKKALKNL 261
             +    L++ ++++
Sbjct: 182 LENDFHVLERLIQDI 196


>gi|332295615|ref|YP_004437538.1| phage SPO1 DNA polymerase-related protein [Thermodesulfobium
           narugense DSM 14796]
 gi|332178718|gb|AEE14407.1| phage SPO1 DNA polymerase-related protein [Thermodesulfobium
           narugense DSM 14796]
          Length = 209

 Score =  161 bits (408), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 46/189 (24%), Positives = 89/189 (47%), Gaps = 10/189 (5%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L ++    ++   C L  T ++ +        D+M+IG  P ++++I G PF GK G +L
Sbjct: 25  LSDILIEAKNCKKCKLSETRINVVFGEGPMNPDIMVIGEGPGETEDIQGLPFVGKAGQLL 84

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            K+ +S+ + R  I+I+ +    PPGNRN    E+E CRP +  QI++++PKI++ +G  
Sbjct: 85  TKIFESVSLNRKDIYITNVVKCRPPGNRNPLPEEIEQCRPFLDAQIKILNPKIIILLGAV 144

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWHAL 251
                   +     +  G+       +     +   HP  L++         +  TW  +
Sbjct: 145 ACKTILK-NFSSITKIRGEIILQDNRYY----IPMFHPSYLLRNASRSIGSPRWLTWKDI 199

Query: 252 ITLKKALKN 260
             +K+ ++ 
Sbjct: 200 QKVKQFIEE 208


>gi|168187460|ref|ZP_02622095.1| uracil-DNA glycosylase family 4 protein [Clostridium botulinum C
           str. Eklund]
 gi|169294650|gb|EDS76783.1| uracil-DNA glycosylase family 4 protein [Clostridium botulinum C
           str. Eklund]
          Length = 185

 Score =  161 bits (408), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 77/186 (41%), Gaps = 6/186 (3%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             EL       H C+L     + +         LM IG  P   ++ +G+PF G+ GN+L
Sbjct: 4   WRELYKECVECHKCNLVEGRNNMVFGEGNPKAKLMFIGEAPGADEDRTGRPFVGRAGNLL 63

Query: 137 DKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
            K L ++++ R    +I+ I    P  NRN    E   C   +  Q+ LI P+I++ +G 
Sbjct: 64  TKGLMALDLHREKDYYITNICKCRPENNRNPMEHEAYACIQYLRNQVALIKPEIIVCLGA 123

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
               +  + D  +  ++ G W         I  +   HP  +++    K   W  L  +K
Sbjct: 124 VAGKYIIDKDL-RITRDRGMWVE----KKGIYIMPIFHPAAILRDDKKKVMFWKDLKEIK 178

Query: 256 KALKNL 261
           +    +
Sbjct: 179 RKYLEI 184


>gi|119872232|ref|YP_930239.1| phage SPO1 DNA polymerase-related protein [Pyrobaculum islandicum
           DSM 4184]
 gi|119673640|gb|ABL87896.1| phage SPO1 DNA polymerase-related protein [Pyrobaculum islandicum
           DSM 4184]
          Length = 193

 Score =  161 bits (407), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 42/179 (23%), Positives = 79/179 (44%), Gaps = 3/179 (1%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
            L +L   ++    C L     + +    +    +MI+G  P  S++  G+PF G  G +
Sbjct: 2   DLEDLNEKIKRCTRCPLHLYRKNAVPGEGSLKLGIMIVGEAPGASEDEEGRPFVGVAGQL 61

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           L K L  + I R  ++I+ +    PPGNR  +  E+E C P +++QI ++ PK ++ +G 
Sbjct: 62  LTKTLAKLGISRDDVYITNVVKCRPPGNRTPTREEIEACLPYLLQQIVILKPKRIVALGL 121

Query: 196 KTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
            +          +  K     GK          +    T HP  +++ P +++   + L
Sbjct: 122 ISGKTLLKLVGREVDKIGNVRGKCFRGQVAGVNLEICLTYHPAAVLRNPHLREVFENDL 180


>gi|268679863|ref|YP_003304294.1| phage SPO1 DNA polymerase-related protein [Sulfurospirillum
           deleyianum DSM 6946]
 gi|268617894|gb|ACZ12259.1| phage SPO1 DNA polymerase-related protein [Sulfurospirillum
           deleyianum DSM 6946]
          Length = 220

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 51/189 (26%), Positives = 94/189 (49%), Gaps = 5/189 (2%)

Query: 71  AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130
           +  +C+L ELK+ +   H C L  +  + I         +M IG  PS S++ +G  FSG
Sbjct: 36  SALSCNLEELKATVAQCHLCALSKSRKNIIFGAGNLKAKVMFIGDNPSVSEDETGMLFSG 95

Query: 131 KTGNMLDKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189
           K+G +L KM++++  I + +++++ I     P NR  +  E+  C+P +M+QI+LI PKI
Sbjct: 96  KSGELLAKMIENVLLIPKEEVYVTHILKCKTPENRVPTPEEVACCKPYMMQQIQLIQPKI 155

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249
           ++ +G+ + +              G   +          + T HP  L++ P  KK  + 
Sbjct: 156 IVTLGSTSFHHLTGEYETPMDTIRGSVLHF----GEAKLIPTFHPNFLLRNPSAKKEVYA 211

Query: 250 ALITLKKAL 258
            L+ ++  L
Sbjct: 212 DLLKVRSML 220


>gi|206896457|ref|YP_002247082.1| DNA polymerase, bacteriophage-type [Coprothermobacter proteolyticus
           DSM 5265]
 gi|206739074|gb|ACI18152.1| DNA polymerase, bacteriophage-type [Coprothermobacter proteolyticus
           DSM 5265]
          Length = 186

 Score =  161 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 74/183 (40%), Gaps = 4/183 (2%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             EL+    +   C LC T  + +  +      L ++G  P  +++  G PF G+ G +L
Sbjct: 6   WKELEQFALNCKACELCKTRRNVVFGSGDPNSRLWLVGEAPGSNEDEQGLPFVGQAGAIL 65

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           D  L+     R  + I+ +    PP N + +  +   C PI+  Q+ +  PK +L +G  
Sbjct: 66  DTFLEKNGFKRHSLFITNVIKCRPPNNADPTEDQKSNCFPILAAQLAIGKPKYILALGRH 125

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
               F     +   +  G+             + T HP  +++ P + +   H +  + +
Sbjct: 126 AAEAFVPKPFRSIKEIRGQV----VLSGETKVVVTYHPAAVLRNPRLGEIVEHDIQMMSR 181

Query: 257 ALK 259
            + 
Sbjct: 182 LIA 184


>gi|139439476|ref|ZP_01772908.1| Hypothetical protein COLAER_01933 [Collinsella aerofaciens ATCC
           25986]
 gi|133775029|gb|EBA38849.1| Hypothetical protein COLAER_01933 [Collinsella aerofaciens ATCC
           25986]
          Length = 206

 Score =  161 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 44/189 (23%), Positives = 83/189 (43%), Gaps = 5/189 (2%)

Query: 71  AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130
           A +  +L E++++L   H C L  +  + +         +M IG  P  ++++ G+PF G
Sbjct: 13  APREVALEEIEAVLGDCHLCQLYQSRHNIVFGVGNPRARVMFIGEAPGRNEDLQGEPFVG 72

Query: 131 KTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
             G  L+ +L    + R  ++I+ +    PPGNRN    E+  C P +  QI  I P I+
Sbjct: 73  AAGEDLNGILSLAGLKREDVYIANVLKCRPPGNRNPRPEEVLACSPFLREQIRSIWPDII 132

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
           + +GN   +F    +     +  G++  +         + T HP   ++ P  ++     
Sbjct: 133 VTLGNPATHFVLKTE-IGITKLRGRFHQM----GHFVVMPTFHPAAALRNPAWQELLEED 187

Query: 251 LITLKKALK 259
              L   L+
Sbjct: 188 FKMLGDYLE 196


>gi|225619055|ref|YP_002720281.1| uracil-DNA glycosylase [Brachyspira hyodysenteriae WA1]
 gi|225213874|gb|ACN82608.1| uracil-DNA glycosylase [Brachyspira hyodysenteriae WA1]
          Length = 249

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 42/191 (21%), Positives = 81/191 (42%), Gaps = 2/191 (1%)

Query: 73  KACSLHELKSLLRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
           K   L ++ S +     C  LC++ L+ +     E  D++ +G  P   ++  G PF G+
Sbjct: 56  KNEELKKIYSEVEKCMKCEALCNSRLNVVFGRGDEEPDIVFVGEAPGADEDKQGLPFVGR 115

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191
            G +LDK ++ + I   + +I       PP NR+    E   CR   + Q+++++PKI+ 
Sbjct: 116 GGKLLDKWIERMNINNKKYYIMNALKCRPPENRDPLPEEKSNCRDYFVNQLKILNPKIIC 175

Query: 192 FIGNKTKNFFFNND-AQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
            +G        + D      +   K          +P +AT HP  +++    +      
Sbjct: 176 ALGRHGFGNLIDFDLKTPFGKARNKVHYYNNNGKDVPVIATYHPAYILRNQKEEDKVIAD 235

Query: 251 LITLKKALKNL 261
           L  +   L+ +
Sbjct: 236 LEFMLNELEKI 246


>gi|269986729|gb|EEZ93009.1| phage SPO1 DNA polymerase-related protein [Candidatus Parvarchaeum
           acidiphilum ARMAN-4]
          Length = 189

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 1/187 (0%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            SL+++   +     C LC    + +     E  D+++IG  P  ++++ G+PF G +G 
Sbjct: 2   ESLNDISKEIVKCTLCELCLKRTNAVPGEGNEKADIVVIGEAPGKNEDLQGRPFIGMSGK 61

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
            L K L+S+ I R  + I+      PP NR     E++ CR  ++RQ+  I+PK++L +G
Sbjct: 62  FLTKNLESLNIKRDSVFITNAVKCRPPNNRKPKKEELDKCRSYLVRQLSSINPKLILALG 121

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
                     + +   +  GK  ++         L T HP   +++P  +K     L   
Sbjct: 122 TSAATS-LGIEFKHLSEIKGKVIDISLNGKKFKCLVTFHPSFPMRFPSARKAFLSDLSMA 180

Query: 255 KKALKNL 261
               KNL
Sbjct: 181 FNLYKNL 187


>gi|15896249|ref|NP_349598.1| Uracil-DNA glycosylase [Clostridium acetobutylicum ATCC 824]
 gi|15026053|gb|AAK80938.1|AE007796_8 Uracil-DNA glycosylase [Clostridium acetobutylicum ATCC 824]
 gi|325510404|gb|ADZ22040.1| Uracil-DNA glycosylase [Clostridium acetobutylicum EA 2018]
          Length = 206

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 49/207 (23%), Positives = 76/207 (36%), Gaps = 26/207 (12%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             EL +       C L     + +         LM +G  P   ++  G+PF G+ G +L
Sbjct: 4   WRELYNECIECQKCRLGENRTNMVFGEGNPEAKLMFVGEAPGADEDRLGRPFVGRAGQLL 63

Query: 137 DKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
            K L ++ + R    +I+ +    P  NR     E E C P +  Q  LI PKIL+ +G+
Sbjct: 64  TKGLTALNLSRDRDYYIANVCKCRPEKNRTPYEDEAEACMPYLRNQFALIKPKILVCLGS 123

Query: 196 KTKNFFF---------------------NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHP 234
               F                        N   +  ++ GKW  +      I  +AT HP
Sbjct: 124 TAMKFIMEPALNKILQQNNTIEEENLIWKNGQMRITRDRGKWLKV----KGIYMMATFHP 179

Query: 235 QELIQYPLIKKNTWHALITLKKALKNL 261
             L +    K   W  L  +K    +L
Sbjct: 180 AALFRDENKKTAFWEDLKLIKAKYVDL 206


>gi|289548718|ref|YP_003473706.1| phage SPO1 DNA polymerase-related protein [Thermocrinis albus DSM
           14484]
 gi|289182335|gb|ADC89579.1| phage SPO1 DNA polymerase-related protein [Thermocrinis albus DSM
           14484]
          Length = 217

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 81/190 (42%), Gaps = 2/190 (1%)

Query: 71  AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130
           ++K  +L EL   + +   C     S   +         ++ +G  P + ++   +PF G
Sbjct: 29  SEKKMALAELYRTMEAEGRCVRYEGSNGYVLGEGNPCSPVIFVGEAPGEEEDRQRRPFVG 88

Query: 131 KTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
           + G  L+  L+ + + R  ++I+ +    PPGNR  +  E+  C   + ++IE+I PK++
Sbjct: 89  RAGQYLNAKLEEVGLRRQDVYITNVVKSRPPGNRTPTAQEIASCVSYLRKEIEIIKPKVI 148

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
           + +G+               +  G+        S I  L T HP  +++ P   +     
Sbjct: 149 VCLGSTALEGVMGRK-MPVTKARGQIFTYPF-DSGIKVLLTYHPAYVLRNPSADREFTQD 206

Query: 251 LITLKKALKN 260
           L  L + L +
Sbjct: 207 LKKLLEILSS 216


>gi|302348684|ref|YP_003816322.1| Uracil-DNA glycosylase [Acidilobus saccharovorans 345-15]
 gi|302329096|gb|ADL19291.1| Uracil-DNA glycosylase [Acidilobus saccharovorans 345-15]
          Length = 213

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 76/190 (40%), Gaps = 3/190 (1%)

Query: 66  QADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISG 125
              S+  K  S  ++   +R+   C L     + +         +M++G  P  +++  G
Sbjct: 2   SPVSLDNKKASYDDIAERVRNCKACPLHRLRTNAVPGEGNLSAKIMLVGEAPGKNEDEQG 61

Query: 126 KPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELI 185
           +PF G  G +L  +L+   + R  ++I+ +    PP NR  +  E+  C   +  +I L+
Sbjct: 62  RPFVGAAGQLLSSLLEQAGLRRQDVYITNVVKCRPPNNRTPTEDEVAACIGFLKEEISLV 121

Query: 186 SPKILLFIGNKTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL 242
            PK+++ +GN   +          +      G+   +      +  + T HP   +  P 
Sbjct: 122 RPKVIVALGNTAGSALMSLAGKQWRGVTAERGRKVKVSIGGVELTVIPTYHPAAALYKPD 181

Query: 243 IKKNTWHALI 252
           +K      + 
Sbjct: 182 LKDYLAKDIK 191


>gi|332654096|ref|ZP_08419840.1| arginine biosynthesis bifunctional protein ArgJ [Ruminococcaceae
           bacterium D16]
 gi|332517182|gb|EGJ46787.1| arginine biosynthesis bifunctional protein ArgJ [Ruminococcaceae
           bacterium D16]
          Length = 188

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 6/187 (3%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
              EL+    S   C L  T  + +  T     ++M+IG  P +++++ G PF G+ G +
Sbjct: 2   DWKELEQECLSCQKCALSQTRHNVVFGTGPRDAEVMLIGEGPGENEDLQGLPFVGRGGKL 61

Query: 136 LDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           LD ML+ I++ R +  +I+ +    PP NR+  N E + C   +  Q+ LI PKI++ +G
Sbjct: 62  LDDMLEVIDLSREKNVYIANMVKCRPPQNRDPLNTEQDACIGYLRNQVALIRPKIIVCLG 121

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
                     D  K  +  G+W       S +  +A  HP  +++ P  +  T+  L  L
Sbjct: 122 RIAAMRLIKPD-FKITKEHGQWFE----KSGVQMMALFHPAAILRDPRRRPETFEDLKRL 176

Query: 255 KKALKNL 261
           +  ++ +
Sbjct: 177 QAKIQEI 183


>gi|294505841|ref|YP_003569899.1| DNA polymerase-related protein,bacteriophage-type [Salinibacter
           ruber M8]
 gi|294342169|emb|CBH22947.1| DNA polymerase-related protein,bacteriophage-type [Salinibacter
           ruber M8]
          Length = 287

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 5/213 (2%)

Query: 49  AIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQ 108
             +  +         +   D+  + A +L E++          +     + +        
Sbjct: 76  PAEDPSLPPPERIEALIPDDAPYKDADTLEEVEQYFADNVLVPIDEDRENPVFGVGDPEA 135

Query: 109 DLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSN 168
           DL+IIG  P  +++  G+PF G+ G +LDK+L +I   R  ++I+ I    PP NRN  +
Sbjct: 136 DLVIIGEAPGRNEDEEGEPFVGRAGQLLDKILDAINFEREDVYITNILKSRPPRNRNPKS 195

Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT 228
            E++   P++ +QI L+ PKI+L +G    N   +        +L    +       IP 
Sbjct: 196 EEIDAHLPVLYKQIALLRPKIILTVGKVAGNTLLDR-----SSSLSNLRDQEHDFYGIPL 250

Query: 229 LATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
           +AT HP  L++    K+ TW  +  L+     L
Sbjct: 251 MATYHPAALLRNSQWKRPTWEDVKLLRTRYDQL 283


>gi|126180274|ref|YP_001048239.1| phage SPO1 DNA polymerase-related protein [Methanoculleus
           marisnigri JR1]
 gi|125863068|gb|ABN58257.1| phage SPO1 DNA polymerase-related protein [Methanoculleus
           marisnigri JR1]
          Length = 219

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 43/193 (22%), Positives = 85/193 (44%), Gaps = 3/193 (1%)

Query: 71  AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130
           A    ++ EL +++     C L   +   +        DLM+IG  P   ++++G+PF G
Sbjct: 19  AGGEAAIEELAAVIGECRKCLLWENTHHAVPGEGNPRADLMLIGEAPGKQEDLTGRPFVG 78

Query: 131 KTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
           + G +L+ +L  I + R  + I+ I    PPGNR+    E+  C P +  QI +I PK++
Sbjct: 79  RAGKLLEGLLSGIGLSRDDVFIANIVKHRPPGNRDPGEEEIRACTPYLEEQIRIIGPKVI 138

Query: 191 LFIGNKTKN---FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247
           + +G  +      F   +  +  +  G           +  + T+HP   +  P  +++ 
Sbjct: 139 VMLGRHSSRYILSFLPVEFDRITEIRGTVYPGLLFGHPVRLIPTLHPAAALYNPRYRESL 198

Query: 248 WHALITLKKALKN 260
               + + + L  
Sbjct: 199 EEDFLIIGRELAE 211


>gi|295100441|emb|CBK97986.1| uracil-DNA glycosylase, family 4 [Faecalibacterium prausnitzii
           L2-6]
          Length = 188

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 47/187 (25%), Positives = 82/187 (43%), Gaps = 6/187 (3%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
               LK+   +   C L +T  + +     E  +++ +G  P  S++  G PF G++G +
Sbjct: 2   DWETLKTDCLACQRCPLHTTRHNVVFGQGVENAEVLFVGEGPGQSEDEQGLPFVGRSGQL 61

Query: 136 LDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           LDK L +I++ R +  +I+ I    PP NR+    E E C P +  Q  L+ PKI++ +G
Sbjct: 62  LDKYLFAIDLDRASNCYIANIVKCRPPQNRDPLPAESEACMPWLREQFRLLRPKIVVCLG 121

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
                     D   T     K        + I  + T HP  L++ P  K   +   + L
Sbjct: 122 RIAAQRMIRADFSVT-----KEHGTFIEKNGILFMGTFHPAALLRQPQNKPEAFGDFVAL 176

Query: 255 KKALKNL 261
           +  +  +
Sbjct: 177 RDKIHEV 183


>gi|83816180|ref|YP_444183.1| uracil-DNA glycosylase [Salinibacter ruber DSM 13855]
 gi|83757574|gb|ABC45687.1| uracil-DNA glycosylase, family 4 [Salinibacter ruber DSM 13855]
          Length = 287

 Score =  159 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 5/213 (2%)

Query: 49  AIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQ 108
             +  +         +   D+  + A +L E++          +     + +        
Sbjct: 76  PAEDPSLPPPERIEALIPDDAPYKDADTLEEVEQYFADNVLVPIDEDRENPVFGVGDPEA 135

Query: 109 DLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSN 168
           DL+IIG  P  +++  G+PF G+ G +LDK+L +I   R  ++I+ I    PP NRN  +
Sbjct: 136 DLVIIGEAPGRNEDEEGEPFVGRAGQLLDKILDAINFEREDVYITNILKSRPPRNRNPKS 195

Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT 228
            E++   P++ +QI L+ PKI+L +G    N   +        +L    +       IP 
Sbjct: 196 EEIDAHLPVLYKQIALLRPKIILTVGKVAGNTLLDR-----SSSLSNLRDQEHDFYGIPL 250

Query: 229 LATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
           +AT HP  L++    K+ TW  +  L+     L
Sbjct: 251 MATYHPAALLRNSQWKRPTWEDVKLLRTRYDQL 283


>gi|163782570|ref|ZP_02177567.1| N-terminus of phage SPO1 DNA polymerase [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159882143|gb|EDP75650.1| N-terminus of phage SPO1 DNA polymerase [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 220

 Score =  159 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 73/178 (41%), Gaps = 3/178 (1%)

Query: 82  SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
              +    C L       +         ++ +G  P + ++  G+PF G+ G  L+K ++
Sbjct: 43  DSFKDCAKCELHRNRTQVVFGDGNPYSPVVFVGEAPGEDEDRQGRPFVGRAGKYLNKKIE 102

Query: 142 SI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF 200
            +  + R +++I+ +    PPGNR  +  E+  C P + ++I++I PK++  +G      
Sbjct: 103 EVLGLRREEVYITNVCKCRPPGNRKPTPAEISACFPYLKKEIDIIKPKVICCLGATAGEG 162

Query: 201 FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
                     +  GK          I  L T HP  +++ P         +  LK+ +
Sbjct: 163 ILG-KKLSITKVRGKNVPYPYDP-SITVLLTYHPAYILRNPRADGEFTEDMERLKELI 218


>gi|300871218|ref|YP_003786091.1| uracil DNA glycosylase [Brachyspira pilosicoli 95/1000]
 gi|300688919|gb|ADK31590.1| uracil DNA glycosylase [Brachyspira pilosicoli 95/1000]
          Length = 236

 Score =  159 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 6/190 (3%)

Query: 73  KACSLHELKSLLRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
           K   L +L   +     C  LCST  + +     E  D++ +G  P   ++  G PF G+
Sbjct: 51  KNEELKKLYQTITKCMKCEALCSTRKNVVFGRGDEKPDIVFVGEAPGADEDKLGFPFVGR 110

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191
            G +LDK ++ + I     +I       PP NR+    E + CR    +Q+E+++PKI+ 
Sbjct: 111 AGKLLDKWIEKLNIS--NYYIMNALKCRPPENRDPLLEEKDNCREFFTKQLEILNPKIIC 168

Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
            +G    +   + D +      GK  N    ++ IP +AT HP  +++    +      L
Sbjct: 169 ALGRHGFSNLVDFDLKT---PFGKVRNNIHYYNNIPVIATYHPAYILRNQKEEIKVIEDL 225

Query: 252 ITLKKALKNL 261
             + + L+ L
Sbjct: 226 EFMMRELEKL 235


>gi|254432687|ref|ZP_05046390.1| bacteriophage-type DNA polymerase N-terminal domain protein
           [Cyanobium sp. PCC 7001]
 gi|197627140|gb|EDY39699.1| bacteriophage-type DNA polymerase N-terminal domain protein
           [Cyanobium sp. PCC 7001]
          Length = 243

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 53/237 (22%), Positives = 88/237 (37%), Gaps = 12/237 (5%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P    T E+ + +           +        +       +    L  + +   +   C
Sbjct: 2   PPPPTTGETGQPDLFGPLTPSAGPSAGPASGSGLPAV----EPDLDLAGVAAACAACRRC 57

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM-RTQ 149
            L +T    + +       LM+IG  P   ++ SG+PF G+ G +LD+ML S+ I     
Sbjct: 58  GLAATRQHVVVSRGDPAARLMVIGEGPGAQEDASGQPFVGRAGQLLDQMLASVGIDSNRD 117

Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209
            +I  +    PP NR  +  EM  CRP + RQI+L  P ++L  G               
Sbjct: 118 AYICNVVKCRPPENRKPTPAEMAACRPWLDRQIQLNDPAVILLAGATAMEGVLGVKG-GI 176

Query: 210 YQNLGKWSNLCTPHS-IIPTLATVHPQELIQYPLI-----KKNTWHALITLKKALKN 260
            +  G+W     P       +   HP  L++ P       K  TW  L  +++ L  
Sbjct: 177 TRLRGQWRQGSGPVLAGRWLMPIFHPSYLLRNPSRQSGSPKWLTWQDLQDVRRRLDQ 233


>gi|116327183|ref|YP_796903.1| Uracil-DNA glycosylase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116332165|ref|YP_801883.1| Uracil-DNA glycosylase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116119927|gb|ABJ77970.1| Uracil-DNA glycosylase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125854|gb|ABJ77125.1| Uracil-DNA glycosylase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 202

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 45/198 (22%), Positives = 91/198 (45%), Gaps = 16/198 (8%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
           +K   L  ++S + +   C L +T   T+         ++ IG  P   ++++G+PF G+
Sbjct: 5   EKLRRLDLIQSEVFACKLCKLHTTRTRTVFGEGNPDSKVVFIGEGPGKQEDLTGRPFVGR 64

Query: 132 TGNMLDKMLQS-IEIMRTQIHISMISPWHP------PGNRNLSNIEMEICRPIIMRQIEL 184
            G +L ++++  +++ R  ++I+ I    P        +R   + E   C P ++RQ+E+
Sbjct: 65  AGELLTRIIEKGMKVPRESVYIANIVKCRPTVDMKFEKDRPPEDEETRACAPYLLRQLEI 124

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL-- 242
           I PK+++ +GN +  F  N   +   +  G W         IP + T HP  +I+     
Sbjct: 125 IQPKVIVTLGNPSTRFILNTK-EGITKLRGTWGTFF----GIPVMPTYHPSFVIRNGGEN 179

Query: 243 --IKKNTWHALITLKKAL 258
             +K+  W  +  +   L
Sbjct: 180 SPLKREVWEDIKKVMDLL 197


>gi|217967775|ref|YP_002353281.1| phage SPO1 DNA polymerase-related protein [Dictyoglomus turgidum
           DSM 6724]
 gi|217336874|gb|ACK42667.1| phage SPO1 DNA polymerase-related protein [Dictyoglomus turgidum
           DSM 6724]
          Length = 210

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 75/190 (39%), Gaps = 5/190 (2%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
            K   L  L+       +C L     + +         +M +G  P   ++  GKPF G 
Sbjct: 5   NKVGKLEILRREAEGCRNCSLWQERTNLVFGEGNPDAFIMFVGEAPGFHEDQQGKPFVGA 64

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191
            G +L ++++SI + R  ++I+ +    PP NR     E+ +C P + +QIE+I+PKI+ 
Sbjct: 65  AGKLLTELIESIGLKREDVYIANVLKCRPPNNREPLPEEIRVCFPFLRQQIEIINPKIIC 124

Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
            +G         +    +                     T HP   + +  + +N     
Sbjct: 125 TLGRYAAYAILGHSVNISTS-----HGKDYYVDGRRVFVTYHPAAALYHGKLLENIKKDF 179

Query: 252 ITLKKALKNL 261
             LK+  + +
Sbjct: 180 EKLKELYEAV 189


>gi|113955244|ref|YP_730877.1| uracil-DNA glycosylase [Synechococcus sp. CC9311]
 gi|113882595|gb|ABI47553.1| Uracil-DNA glycosylase [Synechococcus sp. CC9311]
          Length = 201

 Score =  159 bits (401), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 46/190 (24%), Positives = 78/190 (41%), Gaps = 11/190 (5%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           SL +LK+       C L       + +       LM+IG  P   ++  G+PF G++G +
Sbjct: 4   SLEDLKASCLQCQRCDLAKERKHVVVSRGHPSARLMVIGEAPGADEDAQGRPFVGRSGRL 63

Query: 136 LDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           LD  L  + + +    +I  +    PPGNR  +  E++ CRP + RQI  ++P+IL  +G
Sbjct: 64  LDACLTEVGLDQADDTYICNLIKCRPPGNRRPTPAELKACRPWLDRQILEVNPEILFILG 123

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK-----NTWH 249
                           +  G W+           + + HP  L++ P  +          
Sbjct: 124 ATATATLLECRT-PISRLRGHWTEWKGRC----VMPSFHPSYLLRNPSREPGKPHSLFMA 178

Query: 250 ALITLKKALK 259
            L  +K AL 
Sbjct: 179 DLTHVKHALN 188


>gi|254172784|ref|ZP_04879458.1| uracil-DNA glycosylase [Thermococcus sp. AM4]
 gi|214032940|gb|EEB73768.1| uracil-DNA glycosylase [Thermococcus sp. AM4]
          Length = 194

 Score =  159 bits (401), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 43/188 (22%), Positives = 84/188 (44%), Gaps = 3/188 (1%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           + +L+  +R+   C L     + +  + +    +M +G  P   ++  G PF G+ G +L
Sbjct: 7   MKKLEERIRNCRKCPLGQLRTNAVPGSGSYDAKVMFVGEAPGYWEDQKGLPFVGRAGKVL 66

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           D++L  I + R  ++I+ I    PP NRN +  E+  C P +  QI++I P++++ +G  
Sbjct: 67  DELLAGIGLSRDDVYITNIVKCRPPENRNPTEEEIRACSPYLDMQIDIIRPRVIVPLGRH 126

Query: 197 TKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253
           +  +       + +   +  GK     T    I  +   HP   +  P +++        
Sbjct: 127 SMGYILRKFGFEPEPISKIHGKVFRANTLFGRILIMPMYHPAAALYKPPLREELRKDFEK 186

Query: 254 LKKALKNL 261
           L K L  L
Sbjct: 187 LGKILNEL 194


>gi|254443722|ref|ZP_05057198.1| uracil-DNA glycosylase, family 4, putative [Verrucomicrobiae
           bacterium DG1235]
 gi|198258030|gb|EDY82338.1| uracil-DNA glycosylase, family 4, putative [Verrucomicrobiae
           bacterium DG1235]
          Length = 305

 Score =  158 bits (400), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 57/276 (20%), Positives = 102/276 (36%), Gaps = 26/276 (9%)

Query: 3   SKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKS-------IDSAIQPITN 55
           S+  +S   I  +     D GV     E    +  E  R   +        D++ +    
Sbjct: 21  SRVNVSDSAIQALRKRSVDKGVDTSTREAVLSSIPERVRSADAKDFDKVFTDTSTETKRA 80

Query: 56  IRHIHSPLVQQADSI----AQKACSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQD 109
                 P + +A  +      K      L+  +     C   L       +  +     D
Sbjct: 81  ASQSGGPKLPRAPLVNLVKGDKQAQWEALREQVMGCVVCKGRLKEG-KKLVFGSGNLDAD 139

Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP-----PGNR 164
           +   G  P   D  +G PFSG  G++L KM+ ++ + R  ++I+ I  W P      G R
Sbjct: 140 IFFCGEAPGIEDEDTGVPFSGPAGDLLGKMIGAMGLKRGDVYIADIMNWRPEASTERGKR 199

Query: 165 NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQ-NLGKWSNLCTPH 223
             +  EM  C P +  Q+E++ PK+++ +G             K  +   G+W+      
Sbjct: 200 PPTVEEMNFCMPYLKGQLEIVQPKLIVALGATAVKGLLGAANVKNLRDVKGQWTEFA--- 256

Query: 224 SIIPTLATVHPQELIQYPLI--KKNTWHALITLKKA 257
             +P L T HP  LI+      K++ W   + + + 
Sbjct: 257 -GVPMLPTYHPSYLIRNDTKRDKRSAWEDWLKVMEK 291


>gi|330837396|ref|YP_004412037.1| phage SPO1 DNA polymerase-related protein [Spirochaeta coccoides
           DSM 17374]
 gi|329749299|gb|AEC02655.1| phage SPO1 DNA polymerase-related protein [Spirochaeta coccoides
           DSM 17374]
          Length = 289

 Score =  158 bits (400), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 8/187 (4%)

Query: 73  KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD-LMIIGYTPSDSDNISGKPFSGK 131
            +CSL EL +L+ S  +C LC T   T+     E    +M+IG  P   +++SG+PF GK
Sbjct: 95  SSCSLKELSTLVSSCKNCRLCETRTYTVFGEGQEEHPVVMVIGEGPGRDEDLSGRPFVGK 154

Query: 132 TGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
            G  +D+    I + R    +I+ I    PPGNR+    E++ C P + RQI L+ P+++
Sbjct: 155 GGQYMDRWFAPIGVSRQTNAYIANIVKCRPPGNRDPLPDEVQACIPYLRRQIALVQPRVI 214

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL-IKKNTWH 249
           L  G    +              G        +  IP + T HP  +++    ++   W 
Sbjct: 215 LLAGAVAAHAILETKEGV-----GALRGRTFSYMNIPVIVTYHPAGVLRNLDRLRAPVWE 269

Query: 250 ALITLKK 256
            +  L  
Sbjct: 270 DMKRLAS 276


>gi|329902871|ref|ZP_08273281.1| putative DNA polymerase-like protein, bacteriophage-type protein
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327548581|gb|EGF33241.1| putative DNA polymerase-like protein, bacteriophage-type protein
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 289

 Score =  158 bits (400), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 47/197 (23%), Positives = 80/197 (40%), Gaps = 8/197 (4%)

Query: 69  SIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128
           + A    S  EL+  + S   C LC      +     +    + +G  P   ++  G+PF
Sbjct: 90  AAAIARMSWQELELAVASCTRCALCKNRKQAVLGAGDQKPGWLFVGEGPGHVEDQQGEPF 149

Query: 129 SGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPG----NRNLSNIEMEICRPIIMRQIE 183
            G  G +LD ML ++++ R    +++      P G    +R  S  E   CRP + RQI 
Sbjct: 150 VGPAGKLLDNMLLALDLPRGENNYLANAVKCRPVGADGKDRPPSADESAACRPYLERQIA 209

Query: 184 LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI 243
           L+ P +++ +G          D +               +  IP + T HP  L++ PL 
Sbjct: 210 LLQPAVIVALGKVAALSLLGGDPKIAVAA---LREHTHRYGSIPVVVTYHPAYLLRKPLD 266

Query: 244 KKNTWHALITLKKALKN 260
           K  +W  L    +A  +
Sbjct: 267 KAKSWRDLCLAAQAYAS 283


>gi|221195029|ref|ZP_03568085.1| uracil-DNA glycosylase, family 4 [Atopobium rimae ATCC 49626]
 gi|221184932|gb|EEE17323.1| uracil-DNA glycosylase, family 4 [Atopobium rimae ATCC 49626]
          Length = 226

 Score =  158 bits (399), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 48/188 (25%), Positives = 78/188 (41%), Gaps = 5/188 (2%)

Query: 73  KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
            + +L E++  +R    C LC    + +         +M IG  P  ++++ G+PF G  
Sbjct: 10  SSVTLEEVREQMRDCRLCRLCEGRNTIVFGDGNPHARVMFIGEGPGKNEDLGGRPFIGAA 69

Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192
           G  LD  L +  + R  I I+ +    PP NRN    E+E C P +  Q+  I P  ++ 
Sbjct: 70  GKKLDGYLAAAGLSRDDIFITNVVKCRPPSNRNPRPEEIEACAPYLRNQVRAIWPDAIVC 129

Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
           +GN    F      +      G+     T H +   L T HP   I +P  +      L 
Sbjct: 130 LGNFASQFIL-RTEKGVTSLRGRL--YQTGHFV--VLPTFHPAATIYHPAWEPLLTDDLR 184

Query: 253 TLKKALKN 260
            L + L+ 
Sbjct: 185 LLGQWLQE 192


>gi|187735611|ref|YP_001877723.1| phage SPO1 DNA polymerase-related protein [Akkermansia muciniphila
           ATCC BAA-835]
 gi|187425663|gb|ACD04942.1| phage SPO1 DNA polymerase-related protein [Akkermansia muciniphila
           ATCC BAA-835]
          Length = 305

 Score =  157 bits (398), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 51/220 (23%), Positives = 92/220 (41%), Gaps = 14/220 (6%)

Query: 49  AIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFH-DCHLCSTSLSTICATQTEG 107
             +P         P              L  L++L +++     L S   + + AT    
Sbjct: 76  KPEPPELFPQNREPASAITLPEGTMEDKLQYLRNLAQNWKPARELNSLRDTMVFATGNPH 135

Query: 108 QDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP------P 161
             LM+IG  P   + +  +PF G+ G  L+++L+++ + R  ++IS I  + P       
Sbjct: 136 TKLMLIGEAPGYYEEVQQEPFVGRAGEKLNQILRAMGLSRDMVYISNIVKFRPALPNQRT 195

Query: 162 GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221
            NR  +  E+E C PIIM +I +I PK+++ +G                   G++ +L  
Sbjct: 196 NNRAPTPEEIEACLPIIMHEIRVIQPKMIVALGGTAAVGLLGEQGSV-SSMRGRFHDLN- 253

Query: 222 PHSIIPTLATVHPQELIQ--YPLIKKNTWHALITLKKALK 259
               IP   T HP  L++   P  K+  W  ++ + + L 
Sbjct: 254 ---GIPVRVTYHPSYLLRSDSPREKRKVWEDMLAVMERLD 290


>gi|45656446|ref|YP_000532.1| uracil-DNA glycosylase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|294828371|ref|NP_713848.2| uracil-DNA glycosylase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45599681|gb|AAS69169.1| uracil-DNA glycosylase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|293386223|gb|AAN50866.2| uracil-DNA glycosylase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 218

 Score =  157 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 16/198 (8%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
           +K   L  ++S + +   C L +T   T+        +L+ IG  P   ++++G+PF GK
Sbjct: 20  EKLKRLGLMQSEVSACKLCKLETTRTQTVFGEGNPDAELVFIGEGPGKQEDLTGRPFVGK 79

Query: 132 TGNMLDKMLQS-IEIMRTQIHISMISPWHP------PGNRNLSNIEMEICRPIIMRQIEL 184
            G +L ++++  + + R  ++I+ I    P        +R     E   C P ++RQ+E+
Sbjct: 80  AGELLTRIIEKGMGVPRESVYIANIVKCRPTVDMKFEKDRPPEEEETRACAPYLLRQLEI 139

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL-- 242
           I PK ++ +GN +  F  N   +   +  G W         IP + T HP  +I+     
Sbjct: 140 IQPKAIVTLGNPSTRFILNTK-EGITKLRGTW----GSFFGIPVMPTYHPSFVIRNGGEN 194

Query: 243 --IKKNTWHALITLKKAL 258
             +K++ W  +  +   L
Sbjct: 195 SPLKRDVWEDIKKVMDLL 212


>gi|182415672|ref|YP_001820738.1| phage SPO1 DNA polymerase-related protein [Opitutus terrae PB90-1]
 gi|177842886|gb|ACB77138.1| phage SPO1 DNA polymerase-related protein [Opitutus terrae PB90-1]
          Length = 327

 Score =  157 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 47/243 (19%), Positives = 91/243 (37%), Gaps = 23/243 (9%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRS---F 87
             +  T      +++      P+     I +P          KA     L+  + +    
Sbjct: 76  EPDRGTVTPPVGDRAPAETEAPVARAATIPAPKPFTLPE-GDKAARFAALREHVLADAVC 134

Query: 88  HDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR 147
             C         +    +    +M +G  P   + I G+PF G  G +L KM+ ++ + R
Sbjct: 135 --CAHVRPGKKVVLGVGSLEAKIMFVGEAPGAEEEIQGEPFVGPAGQLLTKMIGAMGLRR 192

Query: 148 TQIHISMISPWHP----------PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197
            +++I  I  W P           GNR  +  EM  C P +  QIE+++P++L+ +G+  
Sbjct: 193 DEVYIGNIMNWRPEMPVSASGVQYGNRPPNGEEMNYCLPYLRAQIEIVNPEVLVALGSTA 252

Query: 198 KNFFFNN-DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI--KKNTWHALITL 254
                     +   +  G+W          P + T HP  +++      K+  W  L+ +
Sbjct: 253 AQGLLGIGSFKALGEVRGRWHTFADK----PLMVTYHPSYILRNQSNRSKRMIWEDLLKV 308

Query: 255 KKA 257
            + 
Sbjct: 309 MER 311


>gi|40063236|gb|AAR38063.1| phage SPO1 DNA polymerase-related protein [uncultured marine
           bacterium 577]
          Length = 236

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 52/212 (24%), Positives = 90/212 (42%), Gaps = 8/212 (3%)

Query: 52  PITNIRHIHSPLVQQADSIAQKA--CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD 109
           P+  +    S  V + +    +       +L+  +     C L      T+     +  D
Sbjct: 25  PVNILAKTPSSSVTKKEDRGSQILRSDWVQLEENVVGCTSCSLFQDRTKTVFGAGDKNAD 84

Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSN 168
            + IG  PS  ++  G+P  G +G +LD ML+++ + R   I+I+      P G+R+  N
Sbjct: 85  WLFIGDVPSTEEDTQGEPLIGLSGELLDNMLEAVSLKRGGNIYIANTVKCRPSGDRSPDN 144

Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT 228
            E + C P ++RQIELI PK+++ +G           A       G+        S IP 
Sbjct: 145 SEEQQCEPFLIRQIELIKPKLIIVLGEIAAQNLLGTSATIDS-LRGRLHEY----SSIPL 199

Query: 229 LATVHPQELIQYPLIKKNTWHALITLKKALKN 260
           + T HP  L+Q    K+  W  L   +  ++ 
Sbjct: 200 IVTYHPAYLLQIQSDKEKVWQDLCFARNIMQK 231


>gi|41615161|ref|NP_963659.1| hypothetical protein NEQ372 [Nanoarchaeum equitans Kin4-M]
 gi|40068885|gb|AAR39220.1| NEQ372 [Nanoarchaeum equitans Kin4-M]
          Length = 198

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 3/188 (1%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
              EL+  + +   C L   + + +     +  D++ IG  P + ++  GKPF G+ G +
Sbjct: 2   DWEELEKQILNCKKCPLYKYARNKVIGDGNKNSDIVFIGEAPGEEEDKQGKPFVGRAGQL 61

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           L+K+L+ I + R QI+I+ +    PP NR+    E+E C+P ++ Q++LI P  ++ +G 
Sbjct: 62  LNKLLEKIGLTRDQIYITNVLKCRPPNNRDPKEEEIEACKPYLVIQLDLIKPTYIVTLGR 121

Query: 196 KTKNF---FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
                    F        +  GK   +   + I+    T+HP   + +            
Sbjct: 122 FATKEIFDLFGLKFSSITKVRGKPYYVRRWNKIVTIFPTLHPAAALYHTKYLPIIEQDFE 181

Query: 253 TLKKALKN 260
            LK+ + N
Sbjct: 182 KLKEIISN 189


>gi|28210008|ref|NP_780952.1| DNA polymerase [Clostridium tetani E88]
 gi|28202443|gb|AAO34889.1| DNA polymerase, bacteriophage-type [Clostridium tetani E88]
          Length = 188

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 6/186 (3%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             EL +   + + C L       +        D+M IG  P   ++ +G+PF G+ G  L
Sbjct: 4   WKELHNNCLACNKCDLSKNRTHMVFGEGNSKADIMFIGEAPGGDEDKTGRPFVGRAGQFL 63

Query: 137 DKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
            KML S++++R    +I  I    P  NRN    E++ C P +  Q  L+ P+I++ +G 
Sbjct: 64  TKMLNSLDLIRERDYYICNICKCRPENNRNPKEDEIKACIPYLRNQFALVQPRIIVCLGA 123

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
              N   ++   +  ++ GKW             AT HP  +++    K+  +  L  +K
Sbjct: 124 IATNQIISDQW-RITRDRGKW----IKRKGCFITATFHPAAVLRDEGKKQYIFRDLQEVK 178

Query: 256 KALKNL 261
           KA ++L
Sbjct: 179 KAYESL 184


>gi|296241955|ref|YP_003649442.1| phage SPO1 DNA polymerase-like protein [Thermosphaera aggregans DSM
           11486]
 gi|296094539|gb|ADG90490.1| phage SPO1 DNA polymerase-related protein [Thermosphaera aggregans
           DSM 11486]
          Length = 202

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 79/183 (43%), Gaps = 4/183 (2%)

Query: 83  LLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142
            +++   C L    ++T+         +++IG  P   ++  G PF G  G +L+ +L++
Sbjct: 13  EIQNCKKCRLHENRINTVPGEGPLTAKVVLIGEAPGRKEDEVGSPFVGPAGRLLNTLLEN 72

Query: 143 IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202
             + R ++ I+ I    PPGNR     E+  C   + RQ+ LI P++L+ +GN      +
Sbjct: 73  SGLKREEVFITNIVKCRPPGNRKPRRDEISQCLGYLGRQLRLIKPRVLILLGNTAAETIY 132

Query: 203 ---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL-ITLKKAL 258
                +     ++ GK   +        ++ T HP   +  P ++          +K  +
Sbjct: 133 GLSGVEWHGMMRDHGKIFEINVYGVKTISIPTFHPAAALYNPRLRTILLEDFTKVVKPVI 192

Query: 259 KNL 261
           + L
Sbjct: 193 EEL 195


>gi|294102554|ref|YP_003554412.1| phage SPO1 DNA polymerase-related protein [Aminobacterium
           colombiense DSM 12261]
 gi|293617534|gb|ADE57688.1| phage SPO1 DNA polymerase-related protein [Aminobacterium
           colombiense DSM 12261]
          Length = 189

 Score =  157 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/185 (23%), Positives = 79/185 (42%), Gaps = 6/185 (3%)

Query: 80  LKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKM 139
           L+  +     C LC      +         +M++G  P  +++ +G+PF G++GN+L ++
Sbjct: 6   LRQRIEVCEKCELCGMRQQPVIGEGLAECRVMLVGEAPGATEDETGRPFVGRSGNLLCQL 65

Query: 140 LQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199
           ++   + R    I+ +    PP NR  +  E++ CRP +  QI L+SP +++  GN    
Sbjct: 66  IEEAGLSREFFFITNMVKCRPPENRKPTKDELDACRPFLEEQIRLLSPLLIVTAGNTPTQ 125

Query: 200 FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK-----NTWHALITL 254
           +F N          G++         I      HP  L++    +K      T   L  +
Sbjct: 126 WFLNTRKGV-TALRGQYYPWDFEGRKIKIRPLFHPSYLLRNRSREKGRPLHQTLCDLREI 184

Query: 255 KKALK 259
              LK
Sbjct: 185 ASFLK 189


>gi|257438681|ref|ZP_05614436.1| uracil-DNA glycosylase [Faecalibacterium prausnitzii A2-165]
 gi|257198865|gb|EEU97149.1| uracil-DNA glycosylase [Faecalibacterium prausnitzii A2-165]
          Length = 188

 Score =  156 bits (395), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 44/187 (23%), Positives = 81/187 (43%), Gaps = 6/187 (3%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
               LK+   +   C LC+     +     +  +++ +G  P  S++  G PF G++G +
Sbjct: 2   DWDTLKAECLACRRCELCTDRTHVVFGQGVQTAEVLFVGEGPGQSEDEQGLPFVGRSGQL 61

Query: 136 LDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           LDK L +I++ R    +I+ I    PP NR+    E E C P +  Q +L+ PKI++ +G
Sbjct: 62  LDKYLFAIDLDRSKNCYIANIVKCRPPQNRDPLPTESEACMPWLREQFKLLQPKIVVCLG 121

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
                     D   T     K        + +  + T HP  L++    K   +   + L
Sbjct: 122 RIASQRMIRTDFSVT-----KEHGTFVQKNGVWFMGTFHPAALLRQAQNKPAAFADFVAL 176

Query: 255 KKALKNL 261
           ++ +  +
Sbjct: 177 REKIHEV 183


>gi|269925911|ref|YP_003322534.1| phage SPO1 DNA polymerase-related protein [Thermobaculum terrenum
           ATCC BAA-798]
 gi|269789571|gb|ACZ41712.1| phage SPO1 DNA polymerase-related protein [Thermobaculum terrenum
           ATCC BAA-798]
          Length = 219

 Score =  156 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 44/188 (23%), Positives = 84/188 (44%), Gaps = 6/188 (3%)

Query: 73  KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
           +  SL  + S +R    C L +T  + +         +M IG  P  +++  G+PF G  
Sbjct: 8   REDSLELIASEVRKCTKCPLSATRTNAVPGEGNPSAQIMFIGEGPGFNEDRQGRPFVGAA 67

Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192
           G  L+++LQS+ + R  + I+ +    PPGNR+    E++ C   + RQIELI P +++ 
Sbjct: 68  GAFLNELLQSVGLRREDVFITNVVKCRPPGNRDPLPEEIQACSCYLDRQIELIKPAVIVT 127

Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
           +G  +   +F N+         +          +  +   HP   +  P +K+ +     
Sbjct: 128 LGRYSMARYFPNERIS------RIHGQPRRIGDLTVVPLFHPAAALHQPALKETSISDFK 181

Query: 253 TLKKALKN 260
            + K ++ 
Sbjct: 182 KIPKIVEE 189


>gi|257792514|ref|YP_003183120.1| phage SPO1 DNA polymerase-like protein [Eggerthella lenta DSM 2243]
 gi|317490382|ref|ZP_07948866.1| uracil-DNA glycosylase, family 4 [Eggerthella sp. 1_3_56FAA]
 gi|325833538|ref|ZP_08165987.1| uracil-DNA glycosylase A [Eggerthella sp. HGA1]
 gi|257476411|gb|ACV56731.1| phage SPO1 DNA polymerase-related protein [Eggerthella lenta DSM
           2243]
 gi|316910517|gb|EFV32142.1| uracil-DNA glycosylase, family 4 [Eggerthella sp. 1_3_56FAA]
 gi|325485462|gb|EGC87931.1| uracil-DNA glycosylase A [Eggerthella sp. HGA1]
          Length = 211

 Score =  156 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 76/183 (41%), Gaps = 5/183 (2%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L E+++ +     C L      T+         +MIIG  P  ++++ G+PF G  G  L
Sbjct: 8   LDEIRAQVEGCRKCPLADGRTQTVFGVGNPEARVMIIGEAPGKNEDLQGEPFVGAAGKYL 67

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           +++L    ++R  + I+ +    PPGNR+    E+E+C P +  Q   I P+ L+ +GN 
Sbjct: 68  NELLAVAGLVREDVFIANVLKCRPPGNRDPRPEEIELCTPYLREQTRTIDPEFLVTLGNF 127

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
           +  F    D   T     +                 HP   +     ++   +   TL +
Sbjct: 128 STKFILKTDIGIT-----RLHGTVQRAGKFKVFPIFHPAAALYDGSKREALENDFATLGE 182

Query: 257 ALK 259
            L+
Sbjct: 183 LLR 185


>gi|171186390|ref|YP_001795309.1| phage SPO1 DNA polymerase-related protein [Thermoproteus
           neutrophilus V24Sta]
 gi|170935602|gb|ACB40863.1| phage SPO1 DNA polymerase-related protein [Thermoproteus
           neutrophilus V24Sta]
          Length = 190

 Score =  156 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 77/178 (43%), Gaps = 3/178 (1%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           +  L   +R    C L     + +         +M++G  P  +++  G+PF G  G++L
Sbjct: 1   MEALHDAIRRCTKCPLHLHRRNAVPGEGRARLGVMVVGEAPGAAEDAEGRPFVGAAGSLL 60

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            K L  + + R  ++I+ +    PP NR  +  E+E C P +++QIEL+ P+ +L +G  
Sbjct: 61  TKTLAKLGVSRDDLYITNVVKCRPPNNRTPTREEVEACLPYLLKQIELVKPRRVLALGLV 120

Query: 197 TKNFFFNNDAQKTYQ---NLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
           +         ++  +     G+          +    T HP  +++ P ++      L
Sbjct: 121 SAKALLGLIGREVEKVGEVRGRCFPGRISGVELEVCVTYHPAAVLRNPNLRGRFEGDL 178


>gi|221632240|ref|YP_002521461.1| phage DNA polymerase-like protein [Thermomicrobium roseum DSM 5159]
 gi|221155463|gb|ACM04590.1| phage DNA polymerase-related protein [Thermomicrobium roseum DSM
           5159]
          Length = 230

 Score =  155 bits (392), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 75/184 (40%), Gaps = 6/184 (3%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L  +   +R    C L  T    +        ++M IG  P   ++  G+PF G  G  L
Sbjct: 29  LESIAERVRHCTRCDLWRTRTQAVPGEGDPHAEVMFIGEAPGYHEDRQGRPFVGAAGQFL 88

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           +++L    + R Q++I+ +    PPGNR+    E+  C P +  QI +I P +++ +G  
Sbjct: 89  NELLGRAGLRREQVYITNVVKCRPPGNRDPLPDEIAACAPYLDEQIAVIRPSVIVTLGRY 148

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
           +   +F N+         +          +  +   HP   +  P +K+        L++
Sbjct: 149 SMARWFPNEKIS------RIHGKPRRFGDVVVVPMYHPAAALHQPALKELVEKDFDALRE 202

Query: 257 ALKN 260
            +  
Sbjct: 203 IIAQ 206


>gi|325283880|ref|YP_004256421.1| phage SPO1 DNA polymerase-related protein [Deinococcus
           proteolyticus MRP]
 gi|324315689|gb|ADY26804.1| phage SPO1 DNA polymerase-related protein [Deinococcus
           proteolyticus MRP]
          Length = 224

 Score =  155 bits (391), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 9/204 (4%)

Query: 64  VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123
           + + D  A    +L EL+   +    C L +  L  + A  T   DL+IIG  P   ++ 
Sbjct: 3   IPERDLWAPDLRALDELERENKGCTACPLRAGCLQVVVADGTPAADLLIIGEGPGGDEDR 62

Query: 124 SGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP-IIMRQI 182
           +G+PF G+ G +LD++L ++++ R   +I+ I    PP NR  +  E++ C    + RQ+
Sbjct: 63  TGRPFVGRAGQLLDRILAAVDLRREDTYITNIVKCRPPANRAPTPPEIQTCTELWLNRQL 122

Query: 183 ELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS--IIPTLATVHPQELIQY 240
            L+ P++++ +GN           Q   +  G+W     P S      +   HP  L++ 
Sbjct: 123 ALLRPRVIVTMGNTPTRHLLG-TQQGITRLRGQWHPYRLPGSDATAALMPMFHPAYLLRN 181

Query: 241 PLI-----KKNTWHALITLKKALK 259
                   K  TW  ++ +   L+
Sbjct: 182 DTRVKGGPKSLTWGDILEVAGVLR 205


>gi|320334828|ref|YP_004171539.1| phage SPO1 DNA polymerase-like protein [Deinococcus maricopensis
           DSM 21211]
 gi|319756117|gb|ADV67874.1| phage SPO1 DNA polymerase-related protein [Deinococcus maricopensis
           DSM 21211]
          Length = 216

 Score =  155 bits (391), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 9/193 (4%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            ++ +L++  R    C L +T    + A       L+I+G  P   ++  G+PF G+ G 
Sbjct: 5   RAIADLEATARGCTACRLRATCTQVVVADGNPDAPLLILGEGPGGDEDRLGRPFVGRAGQ 64

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP-IIMRQIELISPKILLFI 193
           +LDK+L ++ + R   +IS I    PP NR     E+E+C    +  Q+ L+ P++++ +
Sbjct: 65  LLDKILGAVGLTRDDAYISNIVKCRPPANRTPEPDEIEVCTRLWLSGQLALLRPRVIVTL 124

Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS--IIPTLATVHPQELIQYPLI-----KKN 246
           GN    +          +  G+W            P L   HP  L++         K  
Sbjct: 125 GNVPTQYMLG-TRTGITRTRGQWYTYAQAERLWTAPLLPMFHPAYLLRNDTRAPGGPKSL 183

Query: 247 TWHALITLKKALK 259
           TW  +  +K AL 
Sbjct: 184 TWRDIQAVKAALD 196


>gi|148239810|ref|YP_001225197.1| Uracil-DNA glycosylase [Synechococcus sp. WH 7803]
 gi|147848349|emb|CAK23900.1| Uracil-DNA glycosylase [Synechococcus sp. WH 7803]
          Length = 191

 Score =  155 bits (391), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 47/193 (24%), Positives = 80/193 (41%), Gaps = 11/193 (5%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            +L  LKS   +   C L       +      G DLM+IG  P   ++  G PF G++G 
Sbjct: 2   NALDALKSQCAACQCCDLAYHRNQVVVGRGNPGADLMLIGEAPGADEDSQGLPFVGRSGR 61

Query: 135 MLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
           +L ++L++ E+   Q  HI  +    PP NR  ++ E++ CRP +  QI L++P ++L  
Sbjct: 62  LLSELLEAAELDEEQDLHICNVIKCRPPNNRKPTSNEIKQCRPWLEEQIALVNPSLVLLA 121

Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTW 248
           G           +    +  G+W            +   HP  L+++        +  T 
Sbjct: 122 GATALQALLGIKS-GISKLRGQWHEQEGKA----FMPVFHPSYLLRFGSREEGSPRALTL 176

Query: 249 HALITLKKALKNL 261
                 K+ L  L
Sbjct: 177 QDFQEAKRRLSAL 189


>gi|18312072|ref|NP_558739.1| uracil DNA glycosylase (PA-UDGa) [Pyrobaculum aerophilum str. IM2]
 gi|18159500|gb|AAL62921.1| uracil DNA glycosylase (Pa-UDGa) [Pyrobaculum aerophilum str. IM2]
          Length = 196

 Score =  155 bits (391), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 78/182 (42%), Gaps = 3/182 (1%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
            L +L  L+++   C L     + +         +MI+G  P  S++ +G+PF G  G +
Sbjct: 2   DLQKLHELIKNCDKCPLHKYRKNAVPGEGEMKLGVMIVGEAPGASEDEAGRPFVGAAGQL 61

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           L + L  + + R  + I+ +    PP NR  +  E+E C P +++QI ++ P+ ++ +G 
Sbjct: 62  LTEALSRLGVRRGDVFITNVVKCRPPNNRTPNREEVEACLPYLIQQIGILKPRRIIALGL 121

Query: 196 KTKNF---FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
            +           A+K     GK          +    T HP  +++ P ++      L 
Sbjct: 122 ISAKALMELMGRRAEKLGDVKGKCYQGRIAGVQVELCITYHPAAVLRKPALRGEFQKDLA 181

Query: 253 TL 254
             
Sbjct: 182 MF 183


>gi|288573334|ref|ZP_06391691.1| phage SPO1 DNA polymerase-related protein [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288569075|gb|EFC90632.1| phage SPO1 DNA polymerase-related protein [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 192

 Score =  154 bits (390), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 81/190 (42%), Gaps = 6/190 (3%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           S  +L+  + +   C L  T  + +     E   ++++G  P   ++ +G+PF G++G  
Sbjct: 2   SWSKLREAVGTCRGCSLWETRNNAVFGEGPEDSPVLLVGEAPGAEEDSTGRPFVGRSGRF 61

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           L  ++    + R  + IS I    PPGNRN    E+  C   +   + L+ P++++ +GN
Sbjct: 62  LSDLMAEAGLRREDLFISNIVHCRPPGNRNPKKGEIRACLQWLEDIVGLLRPQVVVTVGN 121

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK-----NTWHA 250
                  +   +      G++ +       +      HP  L++    ++     +T   
Sbjct: 122 VPSQTIIDTK-EGISTLRGRFHHGRLGGMDLTIRPIFHPAYLLRNRSREEGSPVSSTLED 180

Query: 251 LITLKKALKN 260
           L TL   ++N
Sbjct: 181 LRTLVDFVRN 190


>gi|302036861|ref|YP_003797183.1| uracil-DNA glycosylase [Candidatus Nitrospira defluvii]
 gi|190343276|gb|ACE75664.1| uracil-DNA glycosylase family 4 [Candidatus Nitrospira defluvii]
 gi|300604925|emb|CBK41258.1| Uracil-DNA glycosylase [Candidatus Nitrospira defluvii]
          Length = 223

 Score =  154 bits (390), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 6/191 (3%)

Query: 70  IAQKACSLHELKSLLRSFHDCHLCS-TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128
           ++    +L EL   L +   C L        +         +M +G  P   ++  G+PF
Sbjct: 1   MSSSPTTLQELAESLHNCQRCPLAKLGRHQVVFGVGNPHASVMFVGEAPGFHEDQKGEPF 60

Query: 129 SGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188
            G  G +L+ +L+S  + R  I+I+ +    PP NR+    E+E C+P +++QI +I PK
Sbjct: 61  VGAAGQLLNDLLESAGLSRADIYIANVIKCRPPNNRDPEPQEVETCKPFLLQQIAMIRPK 120

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW 248
           ++  +GN               +  G+   L            +HP   +    + +   
Sbjct: 121 LVCSLGNWATQTLL-ERKVGITRVRGQAFYL----KEFVLFPLLHPAAALHQGTMLQPLR 175

Query: 249 HALITLKKALK 259
                LK+ L 
Sbjct: 176 EDFQKLKEFLD 186


>gi|71483038|gb|AAZ32472.1| uracyl DNA glycosylase [uncultured euryarchaeote Alv-FOS1]
          Length = 196

 Score =  154 bits (390), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 44/187 (23%), Positives = 79/187 (42%), Gaps = 8/187 (4%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            ++   +R    C L  T  + +       + +M +G  P   ++I G+PF G  G  LD
Sbjct: 13  KDIDEQIRKCQKCELWKTRKNAVPGEGGFRKKVMFVGEAPGKWEDIKGRPFVGAAGKYLD 72

Query: 138 KMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197
           ++L SI + R  + I+ I    PP NR+ ++ E+  C P +  QIE ++P+I+  +G  +
Sbjct: 73  ELLSSIGLSRDDVFITNIVKCRPPNNRDPTSEEISACAPYLEWQIETMAPRIICPLGRFS 132

Query: 198 KNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
             F         +      GK          I  +   HP   + +   K     +   L
Sbjct: 133 AKFILEKFGFTMKSISAAQGKIH-----RGTITIIPMYHPAAALYHGKWKAELEKSFTVL 187

Query: 255 KKALKNL 261
           K+ L+ +
Sbjct: 188 KEELEGI 194


>gi|148254428|ref|YP_001239013.1| putative Uracil-DNA glycosylase [Bradyrhizobium sp. BTAi1]
 gi|146406601|gb|ABQ35107.1| Putative Uracil-DNA glycosylase [Bradyrhizobium sp. BTAi1]
          Length = 496

 Score =  154 bits (390), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 87/242 (35%), Gaps = 17/242 (7%)

Query: 27  VFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQ-KACSLHELKSLLR 85
           +        +        +     + I        P    A++     A  L  L+    
Sbjct: 244 LIAAAGRRMSAMIAEPGTAPHKPQKRIEEPAMTRKPTAPAAETSPDVAAADLETLREEAA 303

Query: 86  SFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI 145
           +   C L   +  T+     +   LM++G  P D ++++G PF G  G MLD+ LQ   I
Sbjct: 304 ACRACPLWKDATQTVFGEGPDHAPLMLVGEQPGDKEDLAGHPFVGPAGQMLDRALQEAGI 363

Query: 146 MRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTK 198
            R++++++                ++  +  E++ CR    R++  + P +++ +G    
Sbjct: 364 DRSKVYVTNAVKHFKFVPRGKIRLHQKPATPEIKACRQWYERELATVRPALVVALGATAA 423

Query: 199 NFFFNNDAQKTYQNLGKWSNLCTPHSII--PTLATVHPQELIQYPLIKKNTWH------A 250
              F        +N G   +L    ++I    + TVHP  L++ P               
Sbjct: 424 QSVFG-KITPVTKNRGHVVDLPEGPNMIATKAMVTVHPSYLLRLPDADAKAREYELFVKD 482

Query: 251 LI 252
           L 
Sbjct: 483 LK 484


>gi|256826607|ref|YP_003150566.1| uracil-DNA glycosylase, family 4 [Cryptobacterium curtum DSM 15641]
 gi|256582750|gb|ACU93884.1| uracil-DNA glycosylase, family 4 [Cryptobacterium curtum DSM 15641]
          Length = 195

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 41/188 (21%), Positives = 73/188 (38%), Gaps = 5/188 (2%)

Query: 73  KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
              SL  L+  + + H C L     + +         ++IIG  P  ++++ G+PF G  
Sbjct: 4   TPQSLESLRRQVEACHACPLWQGRTNVVFGAGNPQARILIIGEAPGKNEDLQGEPFVGAA 63

Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192
           G  LD +L+  ++ R  + I+ +    PP NRN    E+  C P +  Q   I+P+ ++ 
Sbjct: 64  GKKLDALLEIADLARDDVFIANVLKCRPPSNRNPLPEEITACAPFLREQTRTINPEFIVT 123

Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
           +GN +  F        T     +                 HP   I     ++       
Sbjct: 124 LGNFSTKFVLKTQLGIT-----RLHGQLQHAGRFKVFPIYHPAAAIYDRTKQQALEDDFR 178

Query: 253 TLKKALKN 260
           TL + +K 
Sbjct: 179 TLGRLVKE 186


>gi|115523840|ref|YP_780751.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas
           palustris BisA53]
 gi|115517787|gb|ABJ05771.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas
           palustris BisA53]
          Length = 480

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 84/235 (35%), Gaps = 17/235 (7%)

Query: 39  SQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLS 98
           +Q +        +   + R       Q     A +  SL  L++       C L   +  
Sbjct: 246 AQAERDKNAMIAEAPRDPRSSQQRREQPMSKSASQRDSLTTLRAEAAECRACPLWKDATQ 305

Query: 99  TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158
           T+         +M++G  P D ++++G PF G  G MLD+ L    I R +++++     
Sbjct: 306 TVFGEGPSHASVMLVGEQPGDKEDLAGHPFVGPAGQMLDRALAEAGIDRGKVYVTNAVKH 365

Query: 159 HPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQ 211
                      ++  +  E++ CR    R++ L+ P +++ +G                +
Sbjct: 366 FKFVPRGKIRLHQKPTTPEIKTCRQWYERELALVRPTLVVALGATAAQSVLG-RITPINK 424

Query: 212 NLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW------HALITLKKALKN 260
           + G+             L TVHP  L++ P  +            L  +   LK 
Sbjct: 425 SRGRLIEKEGEAQ---VLVTVHPSYLLRLPDEEAKAREYERFVEDLKIVAAHLKK 476


>gi|124026991|ref|YP_001012311.1| Uracil-DNA glycosylase [Hyperthermus butylicus DSM 5456]
 gi|123977685|gb|ABM79966.1| predicted Uracil-DNA glycosylase [Hyperthermus butylicus DSM 5456]
          Length = 221

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 41/189 (21%), Positives = 83/189 (43%), Gaps = 8/189 (4%)

Query: 80  LKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKM 139
           L   + +   C L     + +         +M+IG  P  ++++ G+PF G  G +L+K+
Sbjct: 10  LVEEIMNCTKCRLHQYRRNPVPGEGPLNAKVMVIGEAPGRNEDLQGRPFVGAAGQLLNKL 69

Query: 140 LQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199
           L+   + R Q++I+ I    PPGNR+    E++ C P ++ QI L+ PK+++ +G  +  
Sbjct: 70  LELAGLKREQVYITNIVKCRPPGNRDPQEDEVKACLPYLLHQIRLVKPKLIIAVGRHSAR 129

Query: 200 FFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI---- 252
                     +   +  GK  +       +    T HP   +  P +++           
Sbjct: 130 TLLELAGLQWRSMSEQHGKTYHGEIGGVKLMITVTYHPAAALYKPPLRQKLEDDFRGPIA 189

Query: 253 -TLKKALKN 260
             +++AL+ 
Sbjct: 190 AAVREALRE 198


>gi|94985656|ref|YP_605020.1| phage SPO1 DNA polymerase-related protein [Deinococcus geothermalis
           DSM 11300]
 gi|94555937|gb|ABF45851.1| uracil-DNA glycosylase [Deinococcus geothermalis DSM 11300]
          Length = 230

 Score =  154 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 46/204 (22%), Positives = 80/204 (39%), Gaps = 12/204 (5%)

Query: 67  ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126
           A   A    +L  L+   +S   C L       + +       L+IIG  P   ++  G+
Sbjct: 5   AGRQAADVIALEALEQQAKSCAACKLRPGCTQVVVSDGDPAAPLVIIGEGPGGDEDRLGR 64

Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP-IIMRQIELI 185
           PF G+ G +LD++L ++ + R   + + I    PPGNR     E  IC    +  Q+ L+
Sbjct: 65  PFVGRAGQLLDRILAAVNLTRQDAYFTNIVKCRPPGNRAPEPDETAICTELWLEPQLALL 124

Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT-----PHSIIPTLATVHPQELIQY 240
            P+++L +GN    +      Q   +  G+W                 +   HP  L++ 
Sbjct: 125 RPRVILSLGNTPTQYLLG-TRQGITRTRGQWYPYRHATAQGGSYQALLMPMFHPAYLLRN 183

Query: 241 PLI-----KKNTWHALITLKKALK 259
                   K  TW  +  +   L+
Sbjct: 184 DTRAPGGPKSLTWRDIREVAAVLR 207


>gi|298246517|ref|ZP_06970323.1| phage SPO1 DNA polymerase-related protein [Ktedonobacter racemifer
           DSM 44963]
 gi|297553998|gb|EFH87863.1| phage SPO1 DNA polymerase-related protein [Ktedonobacter racemifer
           DSM 44963]
          Length = 213

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 39/178 (21%), Positives = 74/178 (41%), Gaps = 5/178 (2%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L E+   + +   C+LC      +    +    ++ IG  P   ++  G+PF G  G  L
Sbjct: 7   LREVAVEVSTCSKCNLCKGRTRAVPGEGSTSAKILFIGEGPGYHEDQQGRPFVGPAGQFL 66

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           D++L SI + R+ + I+ +    PP NR+    E+  C   + RQIE + P++++ +G  
Sbjct: 67  DELLASINLKRSDVFITNVVKCRPPQNRDPQPDEIAACNNYLDRQIEALKPRVIVTLGRF 126

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
           +   FF N+         +        +    +A  HP   +    +K         +
Sbjct: 127 SMAKFFGNEKISVIHGRAR-----KKDAGYICIAMYHPAAGLHQASLKDVIREDFKKI 179


>gi|328954809|ref|YP_004372142.1| phage SPO1 DNA polymerase-related protein [Coriobacterium glomerans
           PW2]
 gi|328455133|gb|AEB06327.1| phage SPO1 DNA polymerase-related protein [Coriobacterium glomerans
           PW2]
          Length = 222

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/184 (23%), Positives = 80/184 (43%), Gaps = 5/184 (2%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
            L E++++L     C L  T    +  T  E   ++ IG  P  ++++ G+PF G  G  
Sbjct: 18  ELREVRAVLGECRRCQLAQTRTKIVFGTGDENARVLFIGEAPGKNEDLQGEPFVGAAGKN 77

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           LD +L    + R +++I+ +    PPGNR+    E+  C P +  QI  I P +++ +GN
Sbjct: 78  LDGILSLAGLRREEVYIANVLKCRPPGNRDPRPEEVLACAPFLREQIRSIWPDVIVTMGN 137

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
              +F    +     +  G++  +         + T HP   ++ P  +         L 
Sbjct: 138 PATHFILKTE-IGITRLRGRFHQM----GRFAVMPTFHPAAALRNPAWQDLIEADFNMLG 192

Query: 256 KALK 259
             L+
Sbjct: 193 DYLR 196


>gi|295106610|emb|CBL04153.1| uracil-DNA glycosylase, family 4 [Gordonibacter pamelaeae 7-10-1-b]
          Length = 226

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 77/184 (41%), Gaps = 5/184 (2%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L ++++ + +   C L      T+         ++I+G  P  ++++ G+PF GK G  L
Sbjct: 8   LEDIRAQVEACRKCPLADGRTQTVFGVGNPSARVLIVGEAPGKNEDLQGEPFVGKAGQYL 67

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           +++L    + R  + I+ +    PPGNR+    E+E+C P +  Q   I P+ ++ +GN 
Sbjct: 68  NELLAIAGLAREHVFIANVLKCRPPGNRDPRPEEIELCTPYLREQTRTIDPEFIVTLGNF 127

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
           +  F    +   T     +                 HP   I     ++   +   TL +
Sbjct: 128 STKFILKTEIGIT-----RLHGTLQRAGKFKVFPIFHPAAAIYDGSKREALENDFATLGE 182

Query: 257 ALKN 260
            L+ 
Sbjct: 183 LLRA 186


>gi|71483068|gb|AAZ32501.1| uracil DNA glycosylase [uncultured euryarchaeote Alv-FOS4]
          Length = 196

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 45/187 (24%), Positives = 77/187 (41%), Gaps = 8/187 (4%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
             L   +R    C L  T    +       + +M +G  P   ++I G+PF G  G  LD
Sbjct: 13  DSLDDKIRECKKCGLWKTRTHAVPGEGGFRKKVMFVGEAPGKWEDIKGRPFVGAAGKYLD 72

Query: 138 KMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197
           ++L +I + R  ++I+ I    PP NR+ ++ E+  C P +  QIE + P+++  +G  +
Sbjct: 73  ELLATIGLSRDDVYITNIVKCRPPNNRDPTDEEIRACAPYLEWQIEHMRPRVICPLGRFS 132

Query: 198 KNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
             F         +      GK          I  +   HP   + +   K     A  TL
Sbjct: 133 AKFILEKFGFTMKSITAAQGKIY-----RGDIIIIPMFHPAAALYHGKWKPELEKAFATL 187

Query: 255 KKALKNL 261
           K  L ++
Sbjct: 188 KSVLDDM 194


>gi|260221974|emb|CBA31074.1| hypothetical protein Csp_C26730 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 286

 Score =  152 bits (385), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 50/233 (21%), Positives = 86/233 (36%), Gaps = 7/233 (3%)

Query: 32  NNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCH 91
              A    QR    +  A +P+             A   A  A   + L     +   C 
Sbjct: 52  VRPAPLTEQRPSAPVPMASRPVPVQVAAVESA-APAQPSALAALDWNGLADTAAACESCG 110

Query: 92  LCSTSLS-TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR--- 147
           LC+     T+   Q    D M++G  P + ++ + + F    G +LD ML+++   R   
Sbjct: 111 LCAGRKHATLQPAQQAQADWMVVGDPPEEDEDSAAQAFVEAPGLLLDNMLKAVGAGRSGS 170

Query: 148 --TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                + + +    PP  RN    ++  C   + R+IEL+ PK++  +G        +  
Sbjct: 171 GPQGAYATNVVKCRPPHGRNPQPADLAQCAAYLQREIELVQPKVIFAVGRFAIQTLLSEH 230

Query: 206 AQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
                Q LGK       +  IP + +  P+ L++    K   W  L     AL
Sbjct: 231 GALATQPLGKLRGSVYRYRGIPVVVSYPPKLLLRNSADKAKAWADLCLAMDAL 283


>gi|149921262|ref|ZP_01909718.1| phage SPO1 DNA polymerase-related protein [Plesiocystis pacifica
           SIR-1]
 gi|149817922|gb|EDM77384.1| phage SPO1 DNA polymerase-related protein [Plesiocystis pacifica
           SIR-1]
          Length = 464

 Score =  152 bits (385), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 5/209 (2%)

Query: 34  EATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSL-LRSFHDCHL 92
               E     ++  +  QP  N       L +QA+     A  L  L+   +     C L
Sbjct: 197 RRGPERGAPSQAPGARSQPDANANANKGTLRRQAEQW-PAAKKLAYLRDRSVGDCRRCRL 255

Query: 93  CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHI 152
             T  + +        D+M +G  P   ++  G+PF G  G  LD  L  + + R++++I
Sbjct: 256 AETRRNLVFGVGNPDADMMFVGEAPGAEEDRRGEPFVGAAGQRLDAWLHELGLQRSEVYI 315

Query: 153 SMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN 212
           + +    PPGNR+   +E++ C P +  QI  I P++L+ +G         +   K YQ 
Sbjct: 316 ANVLKCRPPGNRDPHPVEIQRCSPFLHAQIRAIQPRVLVALGRFAG-CLLLDRQLKMYQM 374

Query: 213 LGKWSNLCTPHSI--IPTLATVHPQELIQ 239
            G       P +    P + T HP  +++
Sbjct: 375 RGSVHRYREPKTGTEFPLVVTYHPSYVLR 403


>gi|116754774|ref|YP_843892.1| phage SPO1 DNA polymerase-related protein [Methanosaeta thermophila
           PT]
 gi|116666225|gb|ABK15252.1| phage SPO1 DNA polymerase-related protein [Methanosaeta thermophila
           PT]
          Length = 184

 Score =  152 bits (384), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 45/183 (24%), Positives = 79/183 (43%), Gaps = 9/183 (4%)

Query: 74  ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
           A  L EL   +     C L  T  + +     E   +M+IG  P  +++++G+PF G+ G
Sbjct: 3   ANDLRELACEIVRCERCGLSKTRRNAVPGEGPEDARIMMIGEAPGAAEDLAGRPFVGRAG 62

Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
            +L++ L    + R +I I+ I    PPGNR  S  E+  C P + +QIE++ P  +  +
Sbjct: 63  AILNRALNLAGLDRDEIFITNIVKCRPPGNRQPSADEIRACMPYLRKQIEMVRPSAICLL 122

Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253
           GN                  G+  +          L T HP  +++     +     L+ 
Sbjct: 123 GNVPARAILGVQGV--TALRGRVFDDLY-------LITFHPAAVLRNMGRMELFVSDLVR 173

Query: 254 LKK 256
           L++
Sbjct: 174 LRE 176


>gi|297623507|ref|YP_003704941.1| phage SPO1 DNA polymerase-like protein [Truepera radiovictrix DSM
           17093]
 gi|297164687|gb|ADI14398.1| phage SPO1 DNA polymerase-related protein [Truepera radiovictrix
           DSM 17093]
          Length = 219

 Score =  152 bits (384), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 11/194 (5%)

Query: 74  ACSLHELKSLLRS-FHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
             +L +L+   R+      L   S + +        D++I+G  P + +++ G+PF G+ 
Sbjct: 13  PMTLSDLEQQARNTPKPAALAELSDNLVFGEGNPDADVVIVGEAPGEDEDLLGRPFVGRA 72

Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192
           G +LD++L+S  I R  ++I+ I  + PPGNRN    E+E   P+++ Q+ LI P+I+  
Sbjct: 73  GQLLDRILESAHIEREDVYITNILKYRPPGNRNPKPEEIEASAPLLLEQLRLIRPQIIAT 132

Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNT 247
           +GN    +F     +   +  G+W +       +      HP  L++ P       K   
Sbjct: 133 LGNFPTQYFAGTK-EGITKTRGRWFSW----HGVRVFPMFHPAYLLRNPSRERGSPKWLM 187

Query: 248 WHALITLKKALKNL 261
           W  +  LK A+  L
Sbjct: 188 WQDIRALKAAIDEL 201


>gi|302334972|ref|YP_003800179.1| phage SPO1 DNA polymerase-related protein [Olsenella uli DSM 7084]
 gi|301318812|gb|ADK67299.1| phage SPO1 DNA polymerase-related protein [Olsenella uli DSM 7084]
          Length = 203

 Score =  152 bits (384), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 47/185 (25%), Positives = 78/185 (42%), Gaps = 5/185 (2%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           SL E++SL+ +   C L  T  + +         +MIIG  P  ++++ G+PF G  G  
Sbjct: 18  SLEEIRSLMGNCQLCELGQTRSNLVFGVGDPHARVMIIGEGPGKNEDLQGEPFVGAAGKK 77

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           LD +L +  + R +++I+ +    PP NRN    E+E C P +  Q+  I P  ++ +GN
Sbjct: 78  LDALLGNAGLTRDEVYIANVVKCRPPSNRNPRPAEIEACSPFLREQVRSIWPDAIICLGN 137

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
               +    D        G+             L T HP   I +   +      L  L 
Sbjct: 138 FASQWVLKTDRGVMS-LRGRLHQQ----GHFVVLPTFHPAACIYHSEWQPLLEEDLRLLG 192

Query: 256 KALKN 260
             L+ 
Sbjct: 193 AWLRE 197


>gi|218782236|ref|YP_002433554.1| phage SPO1 DNA polymerase-related protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218763620|gb|ACL06086.1| phage SPO1 DNA polymerase-related protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 235

 Score =  152 bits (384), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 75/181 (41%), Gaps = 5/181 (2%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
             L++   S  DC L    +  +         LM+ G  P   ++ +G PF G+ G +LD
Sbjct: 55  AGLEAEALSCTDCPLHKERIKGVFGQGDPEAALMLAGIAPGMEESKAGLPFQGEVGGLLD 114

Query: 138 KMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197
            +L+++ + R  +++  +     P       + +  C     +Q+E + P+++   G  T
Sbjct: 115 NILKAMGMTRDDVYLCNLVKCPVPDGELPDPMCLRACSRFFRKQVEAVRPQVICAFGQIT 174

Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKA 257
                  D     +  G+          +  + T HP+EL+  P  K+  WH +  + +A
Sbjct: 175 AEAILKQDL-PYSRVRGQLQPY----LGMRVMPTFHPRELLTAPQKKRAVWHDMQAIMRA 229

Query: 258 L 258
           +
Sbjct: 230 I 230


>gi|218460666|ref|ZP_03500757.1| putative uracil DNA glycosylase protein [Rhizobium etli Kim 5]
          Length = 329

 Score =  152 bits (383), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 95/239 (39%), Gaps = 17/239 (7%)

Query: 35  ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94
           A+ ES+ +E +   A Q +     +       +      A +L  L++       C L +
Sbjct: 93  ASAESKVREMAAREATQSLPFHDRLQQAARNLSAEPELPAGTLEALRAEAAVCTRCPLHA 152

Query: 95  TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154
            +  T+        D+M +G  P D ++I+G+PF G  G + D+++    I R+ ++++ 
Sbjct: 153 NATQTVFGEGPRDADVMFVGEQPGDQEDIAGRPFVGPAGRLFDQVIGEAGIDRSTLYVTN 212

Query: 155 ISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207
                          ++  +  E++ CR  +  ++ L+ PK+++ +G        +   +
Sbjct: 213 AVKHFKYEPRGKRRVHQKPNMGEVKHCRWWLDLELALVKPKLIVAMGATALAALTDVKGR 272

Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK------KNTWHALITLKKALKN 260
                 G+   +           TVHP  L++ P  +            ++ +++ +K 
Sbjct: 273 LQ-DVRGRAMAIE---GGRTLFVTVHPSYLLRIPDERLKAEEMARFREDMLEIQRLMKA 327


>gi|257785043|ref|YP_003180260.1| phage SPO1 DNA polymerase-like protein [Atopobium parvulum DSM
           20469]
 gi|257473550|gb|ACV51669.1| phage SPO1 DNA polymerase-related protein [Atopobium parvulum DSM
           20469]
          Length = 221

 Score =  151 bits (382), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 52/217 (23%), Positives = 86/217 (39%), Gaps = 7/217 (3%)

Query: 46  IDSAIQPITNIRHIHSPLVQQADSI--AQKACSLHELKSLLRSFHDCHLCSTSLSTICAT 103
             S   P   +       V+ +      Q   +L E+   +     C L  T  + +   
Sbjct: 2   AASPASPKNALGRKRMSNVEYSKIAYSKQAGQTLDEICEQIADCKKCPLWETRTNIVFGG 61

Query: 104 QTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGN 163
                 +MI+G  P  ++++SG+PF G +G  LD +L+ + +    + IS +    PP N
Sbjct: 62  PNPTARIMIVGEAPGKNEDLSGQPFVGTSGKKLDALLEEVGLSHQDVFISNVVKCRPPSN 121

Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH 223
           RN    E+E C P +  QI  I P +++ +GN    F  + D     +  GK+  +    
Sbjct: 122 RNPKVAEVEECSPYLRDQIRAIKPDVIVCLGNFATQFVMHTDKGV-TELRGKFYQI---- 176

Query: 224 SIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
                L T+HP   I      +     L  L   LK 
Sbjct: 177 GAFSVLPTMHPASTIYRKEWAQFLKDDLQLLADWLKK 213


>gi|118431039|ref|NP_147220.2| uracil-DNA glycosylase [Aeropyrum pernix K1]
 gi|116062365|dbj|BAA79385.2| uracil-DNA glycosylase [Aeropyrum pernix K1]
          Length = 227

 Score =  151 bits (382), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 40/178 (22%), Positives = 75/178 (42%), Gaps = 3/178 (1%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L +L+  +R    C L +T    +         +M++G  P   ++  G+PF G  G +L
Sbjct: 6   LRQLEEEVRRCTRCPLHATRTHAVPGEGPGEAGVMVVGEAPGRMEDRLGRPFVGPAGKLL 65

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           D +L+   + R +++I+ +    PPGNR+    E+E C P ++ QI LI P++++ +G  
Sbjct: 66  DSLLELAGLSRGEVYITNVVKCRPPGNRDPREEEIEACLPYLVEQISLIRPRLVIAVGRH 125

Query: 197 TKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
                F           +  G+          +    T HP   +  P ++       
Sbjct: 126 AGRTLFRLAGLRWPGLARARGRVWRGRIGGVELLIAVTYHPAAALYNPGLRGELERDF 183


>gi|300087337|ref|YP_003757859.1| phage SPO1 DNA polymerase-like protein [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299527070|gb|ADJ25538.1| phage SPO1 DNA polymerase-related protein [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 214

 Score =  151 bits (381), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 6/187 (3%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            SL ++   + S   C L S     +        ++M IG  P  +++ +G+PF G  G 
Sbjct: 7   ASLEDIAREIGSCEACGLASGRNQAVPGEGHAETEIMFIGEAPGFNEDRTGRPFCGAAGQ 66

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
            L +M++SI + R Q++I+ I    PPGNR+    E+  CR  + RQ+  I P++++ +G
Sbjct: 67  FLTQMIESIGLNRNQVYITNIVKCRPPGNRDPLPEEITACRHWLDRQLAAIRPRVVVTLG 126

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
             + + FF    +   +  G+W         +  LA  HP   +    ++      +  L
Sbjct: 127 RYSMSRFF--PGKTISRIHGQW----EKQGDLVCLAMYHPAAALHQGSLRATILADMARL 180

Query: 255 KKALKNL 261
            + +K L
Sbjct: 181 PEIIKEL 187


>gi|15806754|ref|NP_295474.1| DNA polymerase-like protein [Deinococcus radiodurans R1]
 gi|6459521|gb|AAF11304.1|AE002016_6 DNA polymerase-related protein [Deinococcus radiodurans R1]
          Length = 237

 Score =  151 bits (381), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 45/210 (21%), Positives = 87/210 (41%), Gaps = 10/210 (4%)

Query: 58  HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117
                 + QA      A  L  L+   R    C L  ++   + +       L+I+G  P
Sbjct: 6   PPPRHPLHQAADPPDPAA-LLALEDRNRGCAACPLRVSASQVVVSDGDPRAPLLIVGEGP 64

Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP- 176
              ++  G+PF G+ G +LD++L +  + R + +++ ++    P NR    +E   C   
Sbjct: 65  GAEEDRDGRPFVGQAGQLLDRILAAASLAREEAYLTNVTKCRAPNNRTPLPLETATCTGL 124

Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP--TLATVHP 234
            +  Q+ L+ P+++L +GN    F      +   +  G+W     P    P   +  +HP
Sbjct: 125 WLEPQLALLRPRVVLSLGNTATQFLLG-TPRGITRLRGQWFTYRHPAWPQPALLMPLLHP 183

Query: 235 QELIQYPLI-----KKNTWHALITLKKALK 259
             L++ P+      K  TW  +  +   L+
Sbjct: 184 AYLLRNPVRTPGGPKSLTWRDIREVAAVLR 213


>gi|84622266|ref|YP_449638.1| DNA polymerase related protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|84366206|dbj|BAE67364.1| DNA polymerase related protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 482

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 50/267 (18%), Positives = 90/267 (33%), Gaps = 37/267 (13%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60
           M  K   +  +  ++     ++GV         E   E  R+      A QP T      
Sbjct: 225 MPQKYWKNLPEAASLPELIREAGVRV---REMAERAPEPVRRRVPAAPAPQPDTTTH--- 278

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120
                          SL +L+S  R    C L   +  T+     +   +M+IG  P D 
Sbjct: 279 ---------------SLAQLRSAARDCRRCELWQPATQTVFGEGPDDASVMVIGEQPGDE 323

Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEI 173
           +++SG+PF G  G +    L  + + R + +++                +RN     ++ 
Sbjct: 324 EDLSGRPFVGPAGRLFTMALGELGVDRQRFYVTNAVKHFRFEQRGKRRLHRNPERAHLQA 383

Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
           C   +  +   + P  ++ +G             +  Q  G+W  L       P L TVH
Sbjct: 384 CSGWLQAERTQLRPAQIVCLGATAAQAVLGRSGFRLMQERGQWQRL---DDGTPVLTTVH 440

Query: 234 PQELIQYPLIK------KNTWHALITL 254
           P  +++ P         +     L  L
Sbjct: 441 PSWVLRQPSTDAREEGYRGFVEDLRQL 467


>gi|188578772|ref|YP_001915701.1| uracil DNA glycosylase superfamily protein [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|188523224|gb|ACD61169.1| uracil DNA glycosylase superfamily protein [Xanthomonas oryzae pv.
           oryzae PXO99A]
          Length = 477

 Score =  151 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 50/267 (18%), Positives = 90/267 (33%), Gaps = 37/267 (13%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60
           M  K   +  +  ++     ++GV         E   E  R+      A QP T      
Sbjct: 220 MPQKYWKNLPEAASLPELIREAGVRV---REMAERAPEPVRRRVPAAPAPQPDTTTH--- 273

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120
                          SL +L+S  R    C L   +  T+     +   +M+IG  P D 
Sbjct: 274 ---------------SLAQLRSAARDCRRCELWQPATQTVFGEGPDDASVMVIGEQPGDE 318

Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEI 173
           +++SG+PF G  G +    L  + + R + +++                +RN     ++ 
Sbjct: 319 EDLSGRPFVGPAGRLFTMALGELGVDRQRFYVTNAVKHFRFEQRGKRRLHRNPERAHLQA 378

Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
           C   +  +   + P  ++ +G             +  Q  G+W  L       P L TVH
Sbjct: 379 CSGWLQAERTQLRPAQIVCLGATAAQAVLGRSGFRLMQERGQWQRL---DDGTPVLTTVH 435

Query: 234 PQELIQYPLIK------KNTWHALITL 254
           P  +++ P         +     L  L
Sbjct: 436 PSWVLRQPSTDAREEGYRGFVEDLRQL 462


>gi|192290395|ref|YP_001991000.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas
           palustris TIE-1]
 gi|192284144|gb|ACF00525.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas
           palustris TIE-1]
          Length = 495

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 88/231 (38%), Gaps = 20/231 (8%)

Query: 37  YESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTS 96
             ++RK  ++ +A            P + +A+    KA +L  L+   +    C L   +
Sbjct: 262 EHAERKAHAMVAAEATAPRKPQRQEPPMTRAE---PKADTLAHLREEAKDCRACDLWKDA 318

Query: 97  LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156
             T+     +   +M++G  P D ++++GKPF G  G MLD+ L    + R++ +++   
Sbjct: 319 TQTVFGEGPQHATVMLVGEQPGDKEDLAGKPFVGPAGQMLDRALAEAGVDRSKTYVTNAV 378

Query: 157 PWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209
                        ++  +  E++ CR    R++  + P +++ +G               
Sbjct: 379 KHFKFVPRGKIRLHQKPATPEIKACRQWYERELAAVQPLLVVAMGATAAQSVLG-RITPI 437

Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW------HALITL 254
            +  G+  +          L TVHP  L++ P               L  +
Sbjct: 438 NKTRGRLID---RDDGPQVLVTVHPSYLLRLPDADAKAREYARFVEDLKLI 485


>gi|167043274|gb|ABZ07980.1| putative Uracil DNA glycosylase superfamily protein [uncultured
           marine crenarchaeote HF4000_ANIW141M12]
          Length = 191

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 79/185 (42%), Gaps = 6/185 (3%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L  ++  +++   C LC T  + +     +  D++ IG  P  ++++ G+PF G  G  L
Sbjct: 7   LEIIQEKVKTCEKCDLCITRKNAVPGKGNQNADIVFIGEAPGKNEDLRGEPFIGTAGKKL 66

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           D  L+++ + R  ++I+ I    PP NR  +++E  +C   +  ++ +I+PKI+  +G+ 
Sbjct: 67  DDALKNVGLTRNSVYITNIVKCRPPKNRIPNDLEKIMCSNYLEGELAIINPKIICLLGST 126

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                             K               T HP   I    + K   + +  L K
Sbjct: 127 AFYSILGGKEIS------KHHGKFVSKDNRMYFVTFHPAAAIYNQKLGKVFKNDIKKLMK 180

Query: 257 ALKNL 261
            L+ L
Sbjct: 181 ELQKL 185


>gi|316935046|ref|YP_004110028.1| phage SPO1 DNA polymerase-like protein [Rhodopseudomonas palustris
           DX-1]
 gi|315602760|gb|ADU45295.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas
           palustris DX-1]
          Length = 517

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 81/232 (34%), Gaps = 17/232 (7%)

Query: 42  KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTIC 101
            E+   + +              Q       KA +L  L+   +    C L   +  T+ 
Sbjct: 286 AERKAHAMVAAEATAPRKPQRQEQPMTRAKPKADTLAHLREEAKDCRACDLWKDATQTVF 345

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               +   +M++G  P D ++++GKPF G  G MLD+ L    + R++ +++        
Sbjct: 346 GEGPQHATVMLVGEQPGDKEDLAGKPFVGPAGQMLDRALAEAGVDRSKTYVTNAVKHFKF 405

Query: 162 G-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLG 214
                   ++  +  E++ CR    R++  + P +++ +G                   G
Sbjct: 406 VPRGKIRLHQKPNTPEIKACRQWYERELAAVQPLLVVAMGATAAQSVLGKVTPINAN-RG 464

Query: 215 KWSNLCTPHSIIPTLATVHPQELIQYPLIKKN------TWHALITLKKALKN 260
              +          L TVHP  L++ P  +            L  +   L+ 
Sbjct: 465 HLID---RDDGPQVLVTVHPSYLLRLPDAEAKEREYARFVDDLKIVAAHLRK 513


>gi|88808859|ref|ZP_01124368.1| phage SPO1 DNA polymerase-related protein [Synechococcus sp. WH
           7805]
 gi|88786801|gb|EAR17959.1| phage SPO1 DNA polymerase-related protein [Synechococcus sp. WH
           7805]
          Length = 191

 Score =  150 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 45/190 (23%), Positives = 76/190 (40%), Gaps = 11/190 (5%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            +L  L S   +   C L       +      G DLM+IG  P   ++  G PF G++G 
Sbjct: 2   KALDALNSQCAACRRCDLAHHRQKAVVGRGNPGSDLMLIGEAPGADEDSLGLPFVGRSGR 61

Query: 135 MLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
           +L  +L+  E+   Q  +I  +    PP NR  +  E+  CRP +  Q+EL++P ++L  
Sbjct: 62  LLSALLKEAELDEDQDLYICNVIKCRPPNNRKPTLEEIRQCRPWLEEQLELVNPSLVLMA 121

Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK-----KNTW 248
           G           +    +  G+W            +   HP  L+++   +       T 
Sbjct: 122 GATALKALLGIKS-GISKLRGQWHEQE----GRAFMPVFHPSYLLRFQSREAGSPQALTL 176

Query: 249 HALITLKKAL 258
             L   K+ L
Sbjct: 177 QDLQEAKRRL 186


>gi|330834083|ref|YP_004408811.1| phage SPO1 DNA polymerase-related protein [Metallosphaera cuprina
           Ar-4]
 gi|329566222|gb|AEB94327.1| phage SPO1 DNA polymerase-related protein [Metallosphaera cuprina
           Ar-4]
          Length = 206

 Score =  150 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 81/186 (43%), Gaps = 4/186 (2%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           + ++++ + +   CHL  T    +        +++++G  P   ++ +G+PF G  G +L
Sbjct: 1   MQDIRNQVINCKKCHLHKTRTYAVPGEGNTNSEIVLVGEAPGAKEDRTGRPFVGAAGQLL 60

Query: 137 DKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           D+++Q    I R  + I+ +    PP NR+ S  E+  C P ++ QI LI PKI++ +G 
Sbjct: 61  DELIQRYLRIERDSVFITNLVKCRPPNNRDPSEDEIVTCSPYLLAQINLIKPKIIVTLGR 120

Query: 196 KTK---NFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
            +          + +   +  GK   +      +    + HP   +    +K        
Sbjct: 121 HSTRFFQNLAKVEEESISKCHGKPFYINLSFGTVRVFPSYHPAAALYNRSLKSELEKDFQ 180

Query: 253 TLKKAL 258
            L + +
Sbjct: 181 LLSRLI 186


>gi|162146549|ref|YP_001601008.1| uracil-DNA glycosylase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161785124|emb|CAP54669.1| putative uracil-DNA glycosylase [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 309

 Score =  150 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 69/269 (25%), Positives = 113/269 (42%), Gaps = 20/269 (7%)

Query: 11  QILTIALFYADSGVYWVFD-EPNNEATYESQRKEK---SIDSAIQPITNIRHIHSPLVQQ 66
             L +   YA+ G    FD  P +          +          P    R      V+ 
Sbjct: 37  DALALLQLYAEWGADVAFDDSPTDRLAARPPPPARAGIPPARDDAPSPPARPAGRAAVEP 96

Query: 67  ADSI-------------AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113
            D +             A  A +L  L + L +F  C L  T+  T+      G  L++I
Sbjct: 97  DDGLTLVERAIRQARDAAAAAENLPALHAALAAFGGCALRDTATHTVVPEGPAGARLLLI 156

Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173
           G  P  +++ SG  F+G  G +LD+ML SI + RT + ++ + PW PPG R  S  E++I
Sbjct: 157 GEPPDAAEDRSGTAFAGPAGQILDRMLTSIGLARTDMLLAPVIPWRPPGERPPSAAELQI 216

Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI--IPTLAT 231
           C P + R I L +P+ ++ +GN         +     +  G+W ++  P     IP L  
Sbjct: 217 CAPFLHRLIVLANPRRIILMGNTPAR-LLTGEQGGIARLRGRWRDVAIPGLGRAIPILPM 275

Query: 232 VHPQELIQYPLIKKNTWHALITLKKALKN 260
            HP +L   P  +++ W  ++ L+  L  
Sbjct: 276 RHPSQLGASPAARRDAWKDIVLLRTTLDQ 304


>gi|209543453|ref|YP_002275682.1| phage SPO1 DNA polymerase-like protein [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209531130|gb|ACI51067.1| phage SPO1 DNA polymerase-related protein [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 274

 Score =  150 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 68/269 (25%), Positives = 112/269 (41%), Gaps = 20/269 (7%)

Query: 11  QILTIALFYADSGVYWVFDEPNNEATYESQRKEK----SIDSAIQPITNIRHIHSPLVQQ 66
             L +   YA+ G    FD+   +                     P    R      V+ 
Sbjct: 2   DALALLQLYAEWGADVAFDDSPTDHLAARPPPPARAGIPPARDDAPSPPARPAGRAAVEP 61

Query: 67  ADSI-------------AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113
            D +             A  A +L  L + L +F  C L  T+  T+      G  L++I
Sbjct: 62  DDGLTLVERAIRQARDAAAAAENLPALHAALAAFGGCALRDTATHTVVPEGPAGARLLLI 121

Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173
           G  P  +++ SG  F+G  G +LD+ML SI + RT + ++ + PW PPG R  S  E++I
Sbjct: 122 GEPPDAAEDRSGTAFAGPAGQILDRMLTSIGLARTDMLLAPVIPWRPPGERPPSAAELQI 181

Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI--IPTLAT 231
           C P + R I L +P+ ++ +GN         +     +  G+W ++  P     IP L  
Sbjct: 182 CAPFLHRLIVLANPRRIILMGNTPAR-LLTGEQGGIARLRGRWRDVAIPGLGRAIPILPM 240

Query: 232 VHPQELIQYPLIKKNTWHALITLKKALKN 260
            HP +L   P  +++ W  ++ L+  L  
Sbjct: 241 RHPSQLGASPAARRDAWKDIVLLRTTLDQ 269


>gi|39934868|ref|NP_947144.1| Uracil-DNA glycosylase:Phage SPO1 DNA polymerase-like protein
           [Rhodopseudomonas palustris CGA009]
 gi|39648718|emb|CAE27240.1| Uracil-DNA glycosylase:Phage SPO1 DNA polymerase-related protein
           [Rhodopseudomonas palustris CGA009]
          Length = 495

 Score =  149 bits (377), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 87/231 (37%), Gaps = 20/231 (8%)

Query: 37  YESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTS 96
             ++RK  ++ +A            P + +A+    KA +L  L+   +    C L   +
Sbjct: 262 EHAERKAHAMVAAEATAPRKPQRQEPPMTRAE---PKADTLAHLREEAKDCRACDLWKDA 318

Query: 97  LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156
             T+     +   +M++G  P D ++++G+PF G  G MLD+ L    + R++ +++   
Sbjct: 319 TQTVFGEGPQHATVMLVGEQPGDKEDLAGQPFVGPAGQMLDRALAEAGVDRSKTYVTNAV 378

Query: 157 PWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209
                        ++  +  E++ CR    R++  + P +++ +G               
Sbjct: 379 KHFKFVPRGKIRLHQKPATPEIKACRQWYERELAAVQPLLVVAMGATAAQSVLG-RITPI 437

Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW------HALITL 254
            +  G   +          L TVHP  L++ P               L  +
Sbjct: 438 NKTRGHLID---RDDGPQVLVTVHPSYLLRLPDADAKAREYARFVEDLKLI 485


>gi|260654357|ref|ZP_05859847.1| uracil-DNA glycosylase [Jonquetella anthropi E3_33 E1]
 gi|260630990|gb|EEX49184.1| uracil-DNA glycosylase [Jonquetella anthropi E3_33 E1]
          Length = 195

 Score =  149 bits (377), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 72/183 (39%), Gaps = 6/183 (3%)

Query: 80  LKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKM 139
           L   L     C L + + + +  +      ++++G  P  +++ SG PF G +G +L ++
Sbjct: 2   LARELAGCSRCGLRAGAKAPVFGSGPRESRVVLVGEAPGAAEDESGIPFVGASGRLLSQL 61

Query: 140 LQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199
           L+   + R ++ I+      PP NR     E+  C   + RQ+E+I P  ++ +GN    
Sbjct: 62  LEESGLRRDELFITNAVKCRPPDNRTPQKDELSCCLCWLRRQLEMIRPDGIITVGNVPSR 121

Query: 200 FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK-----NTWHALITL 254
                  +      G++ +L             HP  L++    +       T   L  +
Sbjct: 122 ALLG-RREGVTALRGRFYSLEIGGRTAWVRPIFHPAYLLRNRTRRPGSPILLTLEDLKDV 180

Query: 255 KKA 257
              
Sbjct: 181 ACR 183


>gi|258646788|ref|ZP_05734257.1| uracil-DNA glycosylase, family 4 [Dialister invisus DSM 15470]
 gi|260404216|gb|EEW97763.1| uracil-DNA glycosylase, family 4 [Dialister invisus DSM 15470]
          Length = 248

 Score =  149 bits (377), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 49/188 (26%), Positives = 81/188 (43%), Gaps = 12/188 (6%)

Query: 80  LKSLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDK 138
           L++ +     C LC       + +T      LMI+G  P   ++  G P  G +G +LDK
Sbjct: 33  LENAIHRCRLCPLCNEGGRGPVLSTGPVDAPLMIVGEGPGGVEDEYGGPLVGPSGQLLDK 92

Query: 139 MLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC-RPIIMRQIELISPKILLFIGNKT 197
            L S+ I R  ++++ I    P GNR  +  E   C R  +  +I L+ PK+++ +G   
Sbjct: 93  ALLSVGITRDHVYVTNIVKCRPRGNRTPTIAEGNECGRRWLAEEIRLLQPKVIIALGKVA 152

Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP-----LIKKNTWHALI 252
             FF  +DA    ++ G W +       IP + T HP  L++         K   ++ L 
Sbjct: 153 LRFFLGHDA-GIIRSRGHWIDY----KGIPVMPTFHPAYLLRQTGEGLKEAKWQVYYDLK 207

Query: 253 TLKKALKN 260
             K     
Sbjct: 208 AAKDRAAE 215


>gi|325926412|ref|ZP_08187737.1| uracil-DNA glycosylase, family 4 [Xanthomonas perforans 91-118]
 gi|325543201|gb|EGD14639.1| uracil-DNA glycosylase, family 4 [Xanthomonas perforans 91-118]
          Length = 478

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 93/267 (34%), Gaps = 38/267 (14%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60
           M  K   +  +   +     ++GV          A    +   + + +A  P+ ++    
Sbjct: 225 MPQKYWKNLPEATLLPELIREAGVRV-----REMAERAPEPVRRRVPAAPAPLPDVAT-- 277

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120
                          SL +L++  R    C L   +  T+     +   +M+IG  P D 
Sbjct: 278 --------------QSLAQLRTAARDCRRCELWQPATQTVFGEGPDDASVMVIGEQPGDE 323

Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEI 173
           +++SG+PF G  G + +  L  + + R + +++                +RN     ++ 
Sbjct: 324 EDLSGRPFVGPAGRLFNMALGELGVDREKFYVTNAVKHFRFEQRGKRRLHRNPERTHVQA 383

Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
           C   +  +   + P  ++ +G         +  +   +  G+W  L       P L TVH
Sbjct: 384 CSGWLQAERAQLRPAQIVCLGATAAQAILGSSFRLM-RERGQWHRL---DDGTPVLTTVH 439

Query: 234 PQELIQYPLIK------KNTWHALITL 254
           P  +++ P         +     L  L
Sbjct: 440 PSWVLRQPSTDAREEGYRGFVEDLRRL 466


>gi|320162563|ref|YP_004175788.1| uracil-DNA glycosylase [Anaerolinea thermophila UNI-1]
 gi|319996417|dbj|BAJ65188.1| uracil-DNA glycosylase [Anaerolinea thermophila UNI-1]
          Length = 217

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 6/184 (3%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L E+   +     C L  +    +        ++M+IG  P   +N  G+PF G  G  L
Sbjct: 7   LKEIAQQVSECKRCQLHYSRKKAVPGEGPAQAEIMMIGEGPGFYENEQGRPFVGAAGKFL 66

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           D++L+   I R  + I+ +    PPGNR+    E+E C   + RQIE ISPK+++ +G  
Sbjct: 67  DELLEKCGIARKDVFITNVVKCRPPGNRDPQPEELEACNAYLERQIEAISPKVIVTLGRF 126

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
           +   F              W N          +   HP   +  P +K +       L +
Sbjct: 127 SMAKFLPGVKISEVHGQSFWRN------GRLIVPMFHPAAALHQPSLKASVERDFARLSE 180

Query: 257 ALKN 260
            ++ 
Sbjct: 181 YVQA 184


>gi|289524505|ref|ZP_06441359.1| uracil-DNA glycosylase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289502255|gb|EFD23419.1| uracil-DNA glycosylase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 146

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 4/150 (2%)

Query: 88  HDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR 147
             C L      ++    ++  +LM +G  P   +++ G PF GK G +L+++  +  I R
Sbjct: 1   RKCPLSENRTQSVFGEGSKKTELMFVGEGPGADEDLQGLPFVGKAGQLLNQIFAAAGIDR 60

Query: 148 TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207
           ++++I+ +    PP NR  +  E   C   +  QI L+ PKIL+ +GN    +      +
Sbjct: 61  SEVYITNVVKCRPPQNRVPTVEECSACNDYLFAQISLVQPKILVTLGNTPTKWLLKTTHE 120

Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237
              Q  GK  +       I  +   HP  L
Sbjct: 121 GITQLRGKCFDWY----GIKLMPMFHPSYL 146


>gi|260436026|ref|ZP_05789996.1| uracil-DNA glycosylase [Synechococcus sp. WH 8109]
 gi|260413900|gb|EEX07196.1| uracil-DNA glycosylase [Synechococcus sp. WH 8109]
          Length = 187

 Score =  149 bits (375), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 41/189 (21%), Positives = 75/189 (39%), Gaps = 12/189 (6%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           +L  L     +   C L +T  + + +      DLM+IG  P   ++  G PF G++G  
Sbjct: 2   TLSSL-EACSACTACDLATTRHTVVMSRGNPKADLMLIGEAPGAQEDSQGVPFVGRSGRA 60

Query: 136 LDKMLQSIEI-MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           LD++L+ +++     ++I       PP NR     E+  CR  +  Q+E + P +++  G
Sbjct: 61  LDQLLRDVDLDPEHDLYICNAIKCRPPNNRRPKKAELAACRAWLDLQLETVDPTVIVLTG 120

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK-----NTWH 249
                           Q  G+W +          +   HP  L++ P          T  
Sbjct: 121 ATAVEAILGIKG-GMTQLRGQWQSWNERA----VMPIFHPSYLLRNPSKAAGAPLDLTRQ 175

Query: 250 ALITLKKAL 258
            L  +++ L
Sbjct: 176 DLDAVRRRL 184


>gi|209550293|ref|YP_002282210.1| phage SPO1 DNA polymerase-related protein [Rhizobium leguminosarum
           bv. trifolii WSM2304]
 gi|209536049|gb|ACI55984.1| phage SPO1 DNA polymerase-related protein [Rhizobium leguminosarum
           bv. trifolii WSM2304]
          Length = 484

 Score =  148 bits (374), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 95/239 (39%), Gaps = 17/239 (7%)

Query: 35  ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94
           A+ ESQ +  +   A Q +     +              A +L  L +   +   C L +
Sbjct: 248 ASAESQVRAMAAREATQSLPFHDRLQEAARNLPIEPEAPAGTLEALSAEAGACTRCPLHA 307

Query: 95  TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154
            +  T+        ++M +G  P D ++I+G+PF G  G +LD+++  + I R+ ++++ 
Sbjct: 308 KATQTVFGEGPRDAEVMFVGEQPGDQEDIAGRPFVGPAGKLLDQVIADVGIDRSALYVTN 367

Query: 155 ISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207
                          ++  +  E++ CR  +  ++ L+ PK+++ +G        +   +
Sbjct: 368 AVKHFKYEPRGKRRIHQKPNMGEVKHCRWWLDLELALVKPKLIVAMGATALAALTDVKER 427

Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH------ALITLKKALKN 260
                 GK   +           TVHP  L++ P  +            ++ +++ + +
Sbjct: 428 LQ-DVRGKAMAIE---GGRTLFVTVHPSYLLRIPDERLKAEEMVRFRNDMLEIQRLMAS 482


>gi|110635173|ref|YP_675381.1| phage SPO1 DNA polymerase-related protein [Mesorhizobium sp. BNC1]
 gi|110286157|gb|ABG64216.1| phage SPO1 DNA polymerase-related protein [Chelativorans sp. BNC1]
          Length = 206

 Score =  148 bits (374), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 74/200 (37%), Gaps = 17/200 (8%)

Query: 73  KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
           K  +L  ++   +    C L   +  T+         ++ +G  P D +++ G+PF G  
Sbjct: 10  KLKTLDAVREDAQDCTRCDLYKNATQTVFGEGGNQARVVFVGEQPGDKEDVEGRPFVGPA 69

Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELI 185
           G M D +L+ + I R + +++                +   +  E+  CR  + +++ LI
Sbjct: 70  GRMFDAILEEVGIDRKKTYVTNAVKHFKFELRGKRRIHSKPNAGEIRACRWWLDQELTLI 129

Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-- 243
            P + + +G                   G  +        +P   TVHP  L++ P    
Sbjct: 130 QPDVAVALGATAARALVGKAVPVMT-LRGTITE---SAEGVPVFITVHPSSLLRVPDEMD 185

Query: 244 KKNTW----HALITLKKALK 259
           ++         +  +K  +K
Sbjct: 186 RRRARELFAEDMRKVKALMK 205


>gi|85716683|ref|ZP_01047652.1| phage SPO1 DNA polymerase-related protein [Nitrobacter sp. Nb-311A]
 gi|85696523|gb|EAQ34412.1| phage SPO1 DNA polymerase-related protein [Nitrobacter sp. Nb-311A]
          Length = 236

 Score =  148 bits (373), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 76/201 (37%), Gaps = 17/201 (8%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
               SL  L++       C L   +   +         +M++G  P D ++++GKPF G 
Sbjct: 35  APPPSLAGLRAQAAGCRACPLWKDATQIVFGEGPAHAQIMLMGEQPGDREDLAGKPFVGP 94

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIEL 184
            G MLD+ L+   I R +++++                ++  +  E+  CR    R++  
Sbjct: 95  AGQMLDRALKEAGIDRKKVYVTNAVKHFKFVPRGKIRLHQKPNTPEIRACRQWYERELAT 154

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK 244
           I+P +++ +G+      F        ++ G   ++         L TVHP  L++ P   
Sbjct: 155 INPALVVAMGSTAAQSVFG-KITPINKSRGHLIDMK---DGRKALVTVHPSYLLRLPDQD 210

Query: 245 KNTWH------ALITLKKALK 259
                       L      L+
Sbjct: 211 SRAREYERFVDDLKIAATQLQ 231


>gi|78212827|ref|YP_381606.1| phage SPO1 DNA polymerase-related protein [Synechococcus sp.
           CC9605]
 gi|78197286|gb|ABB35051.1| phage SPO1 DNA polymerase-related protein [Synechococcus sp.
           CC9605]
          Length = 187

 Score =  148 bits (373), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 73/183 (39%), Gaps = 11/183 (6%)

Query: 82  SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
               +   C L S+  + + +      DLM+IG  P   ++  G PF G++G  LD++L+
Sbjct: 7   EACSACTACDLASSRQTVVISRGNPKADLMLIGEAPGAQEDAQGVPFVGRSGCALDQLLR 66

Query: 142 SIEI-MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF 200
            +++     ++I       PP NR     E+  CR  +  Q+E + PK+++  G      
Sbjct: 67  DVDLDPEHDLYICNAIKCRPPNNRRPKKTELAACRAWLDLQLEAVDPKVIVLTGATAVEA 126

Query: 201 FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK-----NTWHALITLK 255
                     +  G+W +          +   HP  L++ P          T   L  ++
Sbjct: 127 ILGIKG-GMTRLRGEWQSWN----GREVMPIFHPSYLLRNPSKAAGAPLDLTRQDLSAVR 181

Query: 256 KAL 258
           + L
Sbjct: 182 RRL 184


>gi|33865707|ref|NP_897266.1| Uracil-DNA glycosylase [Synechococcus sp. WH 8102]
 gi|33632877|emb|CAE07688.1| Uracil-DNA glycosylase [Synechococcus sp. WH 8102]
          Length = 187

 Score =  148 bits (373), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 43/186 (23%), Positives = 78/186 (41%), Gaps = 12/186 (6%)

Query: 79  ELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDK 138
           EL+        C L  T    + +       LM+IG  P   ++  G+PF G++G +LD+
Sbjct: 5   ELRD-CEQCTGCDLALTRERVVISRGAATAPLMLIGEAPGAREDALGQPFVGRSGQLLDR 63

Query: 139 MLQSIEI-MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197
           +LQ + +   + ++I       PP NR     E+  CRP +  QI+ ++P++++ +G   
Sbjct: 64  LLQDVGLNPESDLYICNAVKCRPPQNRRPKRAELTACRPWLDHQIDQVNPRVIVLLGATA 123

Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK-----KNTWHALI 252
                        Q  G+W +          +   HP  L++ P          T   L 
Sbjct: 124 VESLLGIKG-GMTQLRGQWLSWDGRD----VMPIFHPSYLLRNPSKASDAPTALTRSDLS 178

Query: 253 TLKKAL 258
           T+++ L
Sbjct: 179 TVQQRL 184


>gi|94496521|ref|ZP_01303097.1| Uracil-DNA glycosylase superfamily protein [Sphingomonas sp. SKA58]
 gi|94423881|gb|EAT08906.1| Uracil-DNA glycosylase superfamily protein [Sphingomonas sp. SKA58]
          Length = 476

 Score =  148 bits (373), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 82/243 (33%), Gaps = 20/243 (8%)

Query: 32  NNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCH 91
            +       R+   I SA +         +       +          ++        C 
Sbjct: 240 PDLVAGAQAREAAMIASAPRAPAQPGGGKAGKAGAGGNSGTA---WAAVREEALGCTRCP 296

Query: 92  LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH 151
           L   +  T+         LM IG  P D ++ +G+PF G  G +LD+ L    + R + +
Sbjct: 297 LHQGATQTVFGEGPLDAPLMFIGEQPGDQEDQAGRPFVGPAGQLLDQALIEAGVDRARAY 356

Query: 152 ISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204
           ++                ++     E++ CR  + ++++++ P++++ +G          
Sbjct: 357 VTNAVKHFKFEARGKRRIHQTPDAGEVQACRWWLTQELDIVRPRLIVALGATAARAMLG- 415

Query: 205 DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW------HALITLKKAL 258
            A    +  G    L           TVHP  L++ P   K           L  + + +
Sbjct: 416 KAVTISRTRGSAITLDNGAEG---WVTVHPSYLLRVPDEAKKAEERARFVEDLRVIGERV 472

Query: 259 KNL 261
           K L
Sbjct: 473 KAL 475


>gi|268323165|emb|CBH36753.1| conserved hypothetical protein, uracil-DNA glycosylase superfamily
           [uncultured archaeon]
          Length = 195

 Score =  148 bits (373), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 46/182 (25%), Positives = 82/182 (45%), Gaps = 3/182 (1%)

Query: 80  LKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKM 139
           ++  ++    C L  T  + +         ++ +G  P  ++++ GKPF GK G +LD++
Sbjct: 10  IEKEIKDCKRCELWKTRTNPVVGEGALSARILFVGEAPGYNEDLKGKPFVGKAGKVLDEL 69

Query: 140 LQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199
           L+SI   R  I+I+ +    PPGNRN    E+  C P +  Q+ELI P ++  +GN +  
Sbjct: 70  LESIGWQRANIYITNVLKCRPPGNRNPLTDEIRACTPFLDAQLELIEPAVIATLGNFSLA 129

Query: 200 FF---FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
           +    F    +K  +  G    + T   I   +   HP  +   P +K+        L  
Sbjct: 130 YIFAKFQLKPEKIGEIHGNVFTVSTIAGIKRIIPLYHPAVVTYNPKMKEVLIDDFKVLAN 189

Query: 257 AL 258
            +
Sbjct: 190 TI 191


>gi|269925234|ref|YP_003321857.1| phage SPO1 DNA polymerase-related protein [Thermobaculum terrenum
           ATCC BAA-798]
 gi|269788894|gb|ACZ41035.1| phage SPO1 DNA polymerase-related protein [Thermobaculum terrenum
           ATCC BAA-798]
          Length = 206

 Score =  148 bits (373), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 41/195 (21%), Positives = 72/195 (36%), Gaps = 19/195 (9%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
            L  ++        C L  T    +      G  +M +G  P + ++ +G PF G+ G +
Sbjct: 11  ELDRVREEALFCQRCTLWQTRTQVVFGAGKAGSKIMFVGEAPGEDEDRTGTPFVGRAGIL 70

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPK 188
           LD++L+   I R   +I+ I    P         NR     E+  C P +  +I L+ P 
Sbjct: 71  LDQLLEEAGIGRESTYITNIIRCRPTAVTQGKITNRAPRAGEVSACEPWMWLEIHLVKPS 130

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--------Y 240
           +++ +G        + + +      G           I  +AT+HP  L++        Y
Sbjct: 131 VIVCVGAPAAKTLIDKNFRL-SDQRGDVYE---KEDGIRYIATLHPAYLLRLLSTDTEAY 186

Query: 241 PLIKKNTWHALITLK 255
              K      L   K
Sbjct: 187 QRAKGLVLQDLKKAK 201


>gi|146339650|ref|YP_001204698.1| putative Uracil-DNA glycosylase [Bradyrhizobium sp. ORS278]
 gi|146192456|emb|CAL76461.1| Putative Uracil-DNA glycosylase [Bradyrhizobium sp. ORS278]
          Length = 493

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 90/231 (38%), Gaps = 19/231 (8%)

Query: 35  ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94
           A   ++  +         +T     H+P  + +  +  +A  L  L+    +   C L  
Sbjct: 257 ADEGTEPHKPQKRVEETAMTRKPKAHAPAAETSRDV--EAVDLQTLREEAAACRACPLWK 314

Query: 95  TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154
            +  T+     E   LM++G  P D ++++G PF G  G MLD+ L    I R++++++ 
Sbjct: 315 DATQTVFGEGPEHAPLMLVGEQPGDKEDLAGHPFVGPAGQMLDRALAEAGIDRSKVYVTN 374

Query: 155 ISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207
                          ++  +  E++ CRP   R++  + P +++ +G       F     
Sbjct: 375 AVKHFKFVPRGKIRLHQKPATPEIKACRPWYERELAAVQPALVVAMGASAAQAVFG-KIT 433

Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH------ALI 252
           +  +N G   +L         + TVHP  L++ P  +            L 
Sbjct: 434 QVTKNRGHIVDLPEGAQ---AMITVHPSYLLRLPDAEAKAREYELFVKDLK 481


>gi|27378134|ref|NP_769663.1| hypothetical protein bll3023 [Bradyrhizobium japonicum USDA 110]
 gi|27351281|dbj|BAC48288.1| bll3023 [Bradyrhizobium japonicum USDA 110]
          Length = 469

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 79/205 (38%), Gaps = 17/205 (8%)

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120
           SP  +        A  L  L+        C L   +  T+     +   +M++G  P D 
Sbjct: 256 SPRPEAIMGHKAAANDLEALREEAAHCRACPLYKDATQTVFGEGPKDATIMLVGEQPGDK 315

Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEI 173
           ++++G PF G  G MLD+ L+   + R +++++                ++  +  E++ 
Sbjct: 316 EDLAGHPFVGPAGQMLDRALEEAGVDRKKVYVTNAVKHFKFVPRGKIRLHQKPATPEIKA 375

Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
           CRP   R++  I P++++ +G       F        +  G+  +L         L TVH
Sbjct: 376 CRPWYEREVAAIQPELIVAMGATAAQSVFG-KITPIGKTRGRLIDLP---DGRKALVTVH 431

Query: 234 PQELIQYPLIKKNTW------HALI 252
           P  L++ P  +            L 
Sbjct: 432 PSYLLRLPDPEAKVLEYQRFVEDLK 456


>gi|158424630|ref|YP_001525922.1| phage SPO1 DNA polymerase-related protein [Azorhizobium caulinodans
           ORS 571]
 gi|158331519|dbj|BAF89004.1| phage SPO1 DNA polymerase-related protein [Azorhizobium caulinodans
           ORS 571]
          Length = 472

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 88/237 (37%), Gaps = 18/237 (7%)

Query: 36  TYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCST 95
                  E+     I       +     +++A   A++A  L  L++       C L + 
Sbjct: 240 APLIADAERRAGEMIAHAATPANPRPHRLEKAALDAEQADGLEALRAQALGCRACPLWAP 299

Query: 96  SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMI 155
           +  T+         +M +G  P D +++ G+PF G  G + D+ LQ   + R + +++  
Sbjct: 300 ATQTVFGEGPTDAPVMFVGEQPGDQEDLDGRPFVGPAGRLFDQALQDAGLERARAYVTNA 359

Query: 156 SPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQK 208
                         +++ + +E+  C   + R+I L+ P++++ +G           A +
Sbjct: 360 VKHFKFEPRGKRRLHQSPNPVEIRACNTWLAREIALVRPRLVVALGASAAQAVSG-RAVR 418

Query: 209 TYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH------ALITLKKALK 259
             ++ G+   L         L +VHP  L++ P  +            L      L 
Sbjct: 419 VGESRGRIMPLEGRD----ALVSVHPSYLLRLPDAEARAREYDRFVADLRLAAPYLA 471


>gi|297568259|ref|YP_003689603.1| phage SPO1 DNA polymerase-related protein [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296924174|gb|ADH84984.1| phage SPO1 DNA polymerase-related protein [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 277

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 93/262 (35%), Gaps = 17/262 (6%)

Query: 11  QILTIALFYADSGVYWVFDEP--NNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQAD 68
            +  + L + + GV      P          Q ++    +    +   +    P   ++ 
Sbjct: 20  DLQGLVLLHRELGVDAYPASPGLLRLLQPSCQGRQGRDSAKTGELGAAKSPAPPARPRSS 79

Query: 69  SIAQKAC---SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISG 125
             A+       L  L + L+    C         I    +    L++I   P  ++  +G
Sbjct: 80  KSAEAEREVPDLTVLAAQLQDCRQCPHHQWRQKVIFGQGSAEARLLLIAGYPGAAEEGAG 139

Query: 126 KPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW-------HPPGNRNLSNIEMEICRPII 178
            P  G  G +LD+ML +I++ R QI+++ +                      +  C P +
Sbjct: 140 LPCQGAAGELLDRMLAAIQLSRRQIYLTTLVKCIPEAARQAATSPAPPEPAAISACLPFL 199

Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238
            +QI  I P ++  +G            +   Q  G++         IP + T+ P  L+
Sbjct: 200 QQQIAAIRPALICTLGPLPAQALL-RTGKHLLQLRGRFHQY----RDIPLMPTLAPDFLL 254

Query: 239 QYPLIKKNTWHALITLKKALKN 260
             P +KK  W  L  ++K L+ 
Sbjct: 255 HNPEMKKYAWQDLQLIQKFLQK 276


>gi|147918737|ref|YP_687540.1| uracil-DNA glycosylase superfamily protein [uncultured methanogenic
           archaeon RC-I]
 gi|110622936|emb|CAJ38214.1| predicted uracil-DNA glycosylase superfamily protein [uncultured
           methanogenic archaeon RC-I]
          Length = 185

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 5/176 (2%)

Query: 82  SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
             +     C L  +  + +  +      +M+IG  P  +++  GKPF G  G +L+ +L+
Sbjct: 12  DDVLKCPRCDLSLSRTNVVIGSGPLDARIMLIGEAPGRNEDKQGKPFVGAAGKVLNLVLE 71

Query: 142 SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
           S  I R  ++I+ +    PP NR     E+E C   + +Q+E+ISPK+++ +G      +
Sbjct: 72  SAGIRRDDVYIANVVKCRPPENRVPKKDEIEACSVYLKKQLEVISPKVVVLLGKTAAESY 131

Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKA 257
                       G+       H     + T HP  +I    +K         ++KA
Sbjct: 132 LGRKVVM-----GEEHGKPFKHEDRTVVITYHPAAIIYNRKLKDALESDFKVIRKA 182


>gi|190892718|ref|YP_001979260.1| uracil DNA glycosylase [Rhizobium etli CIAT 652]
 gi|190697997|gb|ACE92082.1| putative uracil DNA glycosylase protein [Rhizobium etli CIAT 652]
          Length = 484

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 91/237 (38%), Gaps = 17/237 (7%)

Query: 35  ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94
           A+ ES+ +E +   A + +     +              A +L  L++       C L +
Sbjct: 248 ASAESKVREMAAREATRSLPFHDRLQQAARNLPTEPEAPAGTLEALRAQASVCTRCPLHA 307

Query: 95  TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154
            +  T+         +M +G  P D ++I+G+PF G  G + D+++    I R+ ++++ 
Sbjct: 308 NATQTVFGEGPRDAAVMFVGEQPGDQEDIAGRPFVGPAGRLFDQVMAEAGIDRSMVYVTN 367

Query: 155 ISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207
                          ++  +  E++ CR  +  ++ L+ PK+++ +G        +   +
Sbjct: 368 SVKHFKYEPRGKRRIHQKPTMGEVKHCRWWLDLELALVEPKLIVAMGATALAALTDVKGR 427

Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK------KNTWHALITLKKAL 258
                 GK   +           TVHP  L++ P  +            ++ ++  +
Sbjct: 428 LQ-DVRGKAMAIE---GGRTLFVTVHPSYLLRIPDERLKAEEMARFRQDMLEIQGLM 480


>gi|83590984|ref|YP_430993.1| phage SPO1 DNA polymerase-related protein [Moorella thermoacetica
           ATCC 39073]
 gi|83573898|gb|ABC20450.1| phage SPO1 DNA polymerase-related protein [Moorella thermoacetica
           ATCC 39073]
          Length = 191

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 5/186 (2%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
            L  LK+   +   C L + +   +  +   G  LM++G      ++  G+PF+G  G +
Sbjct: 2   DLKGLKAKSPACRGCSLRTGTRQVVSGSGNPGAGLMLVGEGLGAREDRVGRPFAGAAGQL 61

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           L ++L++    R +++I+ I    PPGNR   + E+E CRP++   I+ + P+I++ +G 
Sbjct: 62  LGRLLKAAGFRREEVYITNIVKCRPPGNRMPESAEVEACRPLLDAAIDFVRPQIIVCLGA 121

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
                          +  G+W         I  L T HP  L++              L+
Sbjct: 122 LATRTLVAP-GASITRLRGRWIE----KDGIRYLPTFHPAALLRDGGKIPLVEEDFRKLR 176

Query: 256 KALKNL 261
            A + L
Sbjct: 177 AAYQAL 182


>gi|209884314|ref|YP_002288171.1| transcriptional regulator, Fis family [Oligotropha carboxidovorans
           OM5]
 gi|209872510|gb|ACI92306.1| transcriptional regulator, Fis family [Oligotropha carboxidovorans
           OM5]
          Length = 209

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 43/200 (21%), Positives = 80/200 (40%), Gaps = 17/200 (8%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            +L +L+        CHL   +  T+         +M +G  P D ++++G+PF G  G 
Sbjct: 14  ENLADLREEAAHCRACHLYKNATQTVFGEGAAHAAVMFVGEQPGDKEDLAGRPFVGPAGQ 73

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISP 187
           +LD+ L+   I R + +I+                ++  +  E++ CRP   R++  + P
Sbjct: 74  VLDRGLKEAGIARNKTYITNAVKHFKFVPRGKIRLHQKPTTPEIKACRPWYERELATVKP 133

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIK- 244
            +++ +G       F        +N G+  +L         L TVHP  L++   P  K 
Sbjct: 134 ALVVAMGATAAQCVFG-KITPIGKNRGRLFDLAEDA---KALVTVHPSYLLRLPDPDSKE 189

Query: 245 ---KNTWHALITLKKALKNL 261
              K     L      L+ +
Sbjct: 190 REYKQFVSDLKLAASYLREI 209


>gi|327192707|gb|EGE59644.1| putative uracil DNA glycosylase protein [Rhizobium etli CNPAF512]
          Length = 484

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 93/237 (39%), Gaps = 17/237 (7%)

Query: 35  ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94
           A+ ES+ +E +   A Q +     +      +       A +L  L++       C L +
Sbjct: 248 ASAESKVREMAAREATQSLPFHDRLQQASHNRTREPEAPAGTLEALRAEAAVCTRCPLHA 307

Query: 95  TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154
            +  T+         +M +G  P D ++I+G+PF G  G + D+++    I R+ ++++ 
Sbjct: 308 KATQTVFGEGPRDAAVMFVGEQPGDQEDIAGRPFVGPAGKLFDQVIAEAGIDRSTLYVTN 367

Query: 155 ISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207
                          ++  +  E++ CR  +  ++ L+ PK+++ +G        +   +
Sbjct: 368 SVKHFKYEPRGKRRIHQKPTMGEVKHCRWWLDLELTLVEPKLIVAMGATALAALTDMKDR 427

Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK------KNTWHALITLKKAL 258
                 GK   +           TVHP  L++ P  +            ++ +++ +
Sbjct: 428 LQ-DVRGKAMAIE---GGRTLFVTVHPSYLLRIPDERLKAEEMARFRQDMLEIQRLM 480


>gi|319780107|ref|YP_004139583.1| phage SPO1 DNA polymerase-related protein [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317165995|gb|ADV09533.1| phage SPO1 DNA polymerase-related protein [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 485

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 88/239 (36%), Gaps = 17/239 (7%)

Query: 35  ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94
           A   ++     + +   P            Q  ++    A ++ EL+   +    C L  
Sbjct: 251 ADKAAKDMIAKMPTTPAPHHAKVQARHWPKQPVEAPEDDASTIPELREAAKGCRRCPLWR 310

Query: 95  TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154
            +  T+     +   ++ +G  P D ++++GKPF G  G + D +L    + R +++++ 
Sbjct: 311 DATQTVFGEGPDNAKVIFVGEQPGDQEDLAGKPFVGPAGKVFDAILDDAGVDRQKVYVTN 370

Query: 155 ISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207
                          +   ++ E++ CR  I ++ ELI P + + +G           A 
Sbjct: 371 AVKHFKFEPRGKRRIHSKPNSGEIQACRWWIDQEFELIKPNLAVALGATAAMSLLG-KAI 429

Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIK----KNTWHALITLKKALKN 260
              +  G+          +    T+HP  ++  + P  K    +     +  +K+ +  
Sbjct: 430 PVTKMRGQVIE---REDGLRVFITIHPSFILRIREPADKEAERERFLQDMKLVKRLMAA 485


>gi|327311693|ref|YP_004338590.1| phage SPO1 DNA polymerase-like protein [Thermoproteus uzoniensis
           768-20]
 gi|326948172|gb|AEA13278.1| phage SPO1 DNA polymerase-related protein [Thermoproteus uzoniensis
           768-20]
          Length = 198

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 4/182 (2%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L E+   +R    C L  T    +       + +MI+G  P + ++  G+PF G  G +L
Sbjct: 5   LLEIAERIRGCTRCRLHETRRLAVPGEGRAEKGIMIVGEAPGEKEDEEGRPFVGPAGRLL 64

Query: 137 DKMLQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
             +L    I R   + I+ +    PPGNR     E+  C P ++ QI  I P++++ +G 
Sbjct: 65  TSILTRYGIDRGRDVFITNVVKCRPPGNREPLEDEIAACTPYLVEQIAAIRPRLIVALGV 124

Query: 196 KTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
            +             K     GK   +           T HP   +  P ++      L 
Sbjct: 125 HSARTLMSFAGRRVAKITDVRGKCFKVRIAGVETTLCVTYHPAAALYNPRLRTTLEEDLR 184

Query: 253 TL 254
             
Sbjct: 185 RF 186


>gi|332284994|ref|YP_004416905.1| uracil-DNA glycosylase [Pusillimonas sp. T7-7]
 gi|330428947|gb|AEC20281.1| uracil-DNA glycosylase [Pusillimonas sp. T7-7]
          Length = 286

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 52/223 (23%), Positives = 84/223 (37%), Gaps = 8/223 (3%)

Query: 40  QRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLST 99
           Q   + + +  QP        SP + +         +   L S +     C L       
Sbjct: 63  QATRELLRTPPQPKAKQPAPESPEMPRLPV----PETWEALISHIAGCQACGLHVGRSHA 118

Query: 100 ICATQTEG-QDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISP 157
           +     E   + +++G  P   D+ +G PF GK G +L  ML SI++        + +  
Sbjct: 119 VSGAGAEHMPEWLVVGEAPGSVDDRTGLPFQGKAGQLLQAMLASIQVTEQTPVFFTNVIK 178

Query: 158 WHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS 217
             P GNR  +  E+E C P + RQI L+ P  +L +G+                  GK  
Sbjct: 179 CRPLGNRTPTQDEIEACMPYLQRQIALLKPHRILALGSLAAQAVLGLQNDLEA-LRGKVH 237

Query: 218 NLCTP-HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
            + +     IP + T HP  L+  P  K + W  L   +  L 
Sbjct: 238 AMRSEADQDIPVVVTYHPTALLLRPQHKPDAWRDLNLARTLLA 280


>gi|167045662|gb|ABZ10310.1| putative Uracil DNA glycosylase superfamily protein [uncultured
           marine crenarchaeote HF4000_APKG10L15]
          Length = 191

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 46/186 (24%), Positives = 85/186 (45%), Gaps = 6/186 (3%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           SL  ++  ++    C+LC T  + +     +  D++ IG  P  +++  G+PF G  G  
Sbjct: 6   SLKIIQEKVKICKKCNLCFTRKNAVPGKGNQNADIVFIGEAPGKNEDQHGEPFIGTAGKK 65

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           L+  L+++ + R  ++I+ I    PP NR  ++IE  +C   +  +I +I+PKI+  +GN
Sbjct: 66  LNDALENVGLTRNSVYITNIVKCRPPNNRVPNDIEKAMCSNYLEDEIAIINPKIICLLGN 125

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
                      ++  +N GK+              T HP   I    + K   + +  L 
Sbjct: 126 TPFYSILG--GKEISKNHGKFVYKDNRMY----FVTFHPAATIYNQKLGKVFKNDIRKLM 179

Query: 256 KALKNL 261
           K L+ L
Sbjct: 180 KELQKL 185


>gi|159900927|ref|YP_001547174.1| phage SPO1 DNA polymerase-related protein [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159893966|gb|ABX07046.1| phage SPO1 DNA polymerase-related protein [Herpetosiphon
           aurantiacus ATCC 23779]
          Length = 220

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 40/180 (22%), Positives = 79/180 (43%), Gaps = 4/180 (2%)

Query: 82  SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
             +     C LC T  + +        ++++IG  P   ++  G+PF G +G++L++ L 
Sbjct: 13  EEVAQCTACPLCRTRTNAVPGEGPANAEILLIGEGPGQREDALGRPFVGPSGDLLEQWLA 72

Query: 142 SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
            I + R Q+ I+ +    PPGNR+    E+  C   + RQI  ++PK++  +G  + N F
Sbjct: 73  EIGLTREQVFIANVVKCRPPGNRDPEPSEIAACAHFLDRQIAALAPKLIATLGRHSMNKF 132

Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
           F     K  +  G    +      +  L   HP  +++      +    +  + + +  L
Sbjct: 133 F--PGGKITKIHG-IRGVKRQGQTV-FLPLFHPAYVLRNMNAMPDAIADIKLIPRLIARL 188


>gi|284047489|ref|YP_003397828.1| phage SPO1 DNA polymerase-related protein [Acidaminococcus
           fermentans DSM 20731]
 gi|283951710|gb|ADB46513.1| phage SPO1 DNA polymerase-related protein [Acidaminococcus
           fermentans DSM 20731]
          Length = 215

 Score =  146 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 10/195 (5%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
           + A +  ELK  L     C L     + +         LMI+G  P   ++  G P  G 
Sbjct: 2   EPAKTFDELKKQLEDCAACPLRKDCQAPVGWFGNLESPLMIVGEGPGGVEDDYGCPLIGP 61

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP-IIMRQIELISPKIL 190
           +G +LDK L S+ I R +I+ + +    P GNR  +  E   C    + ++I L+ PK++
Sbjct: 62  SGQLLDKALWSVRITRDRIYTTNVIKCRPRGNRTPTVEEGSFCARLWLEQEIRLLRPKVI 121

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ-----YPLIKK 245
           L +G+    +F   +A +  +  G+W         IP LAT HP  L++         K 
Sbjct: 122 LALGSVALRYFKGPEA-RITRERGQWFTT---GEGIPCLATFHPSYLLRLTGQAQIAAKW 177

Query: 246 NTWHALITLKKALKN 260
           + +H L  +K  ++ 
Sbjct: 178 DVFHDLEAVKAKVEE 192


>gi|294666301|ref|ZP_06731551.1| uracil DNA glycosylase superfamily protein [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 10535]
 gi|292603952|gb|EFF47353.1| uracil DNA glycosylase superfamily protein [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 10535]
          Length = 478

 Score =  146 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 92/267 (34%), Gaps = 38/267 (14%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60
           M  K   +  +   +     ++GV          A    +   + + +A  P+  +    
Sbjct: 225 MPQKYWKNLPEAALLPELIREAGVRV-----REMAERAPEPVRRRVPAAPAPLPEVAT-- 277

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120
                          SL +L++  R    C L   +  T+     +   +M+IG  P D 
Sbjct: 278 --------------QSLAQLRTAARDCRRCELWQPATQTVFGEGPDDASVMVIGEQPGDE 323

Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEI 173
           +++SG+PF G  G + +  L  + + R + +++                +RN     ++ 
Sbjct: 324 EDLSGRPFVGPAGRLFNMALGELGVDREKFYVTNAVKHFRFEQRGKRRLHRNPERTHVQA 383

Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
           C   +  +   + P  ++ +G         +  +   Q  G+W  L       P L TVH
Sbjct: 384 CSGWLQAERAQLRPAQIVCLGATAAQAVLGSRFRLMQQ-RGQWQRL---DDGTPVLTTVH 439

Query: 234 PQELIQYPLIK------KNTWHALITL 254
           P  +++ P         +     L  L
Sbjct: 440 PSWVLRQPSTDAREEGYRGFVEDLRRL 466


>gi|160902797|ref|YP_001568378.1| phage SPO1 DNA polymerase-related protein [Petrotoga mobilis SJ95]
 gi|160360441|gb|ABX32055.1| phage SPO1 DNA polymerase-related protein [Petrotoga mobilis SJ95]
          Length = 226

 Score =  146 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 45/196 (22%), Positives = 86/196 (43%), Gaps = 11/196 (5%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
           +K  ++  +   +     C L  T  +T+  +      +M +G  P   ++  G+PF G+
Sbjct: 8   EKQKNIEMIAKRIEVCEKCPLNLTRTNTVPGSGNVDSPIMFVGEGPGADEDALGEPFVGR 67

Query: 132 TGNMLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
            G +L+KML +  ++ R  + I+ I    PP NR  +  E++ C+  +  QI +I PKI+
Sbjct: 68  AGQLLEKMLKEYAKLERNDVFITNIVKCRPPQNRVPTQEEVKSCQSYLDGQIIVIKPKII 127

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KK 245
           + +GN    +F         Q+ G++ N    +  I    T HP  L++         K 
Sbjct: 128 VTLGNTPLYYFTGESK--ITQSRGRFFNW---YGDIKIFPTFHPSYLLRNQSSTKGSPKW 182

Query: 246 NTWHALITLKKALKNL 261
             +  +  +    + L
Sbjct: 183 YAYLDMRIIGIMYRAL 198


>gi|294625714|ref|ZP_06704335.1| DNA polymerase related protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292600018|gb|EFF44134.1| DNA polymerase related protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 478

 Score =  146 bits (368), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 92/267 (34%), Gaps = 38/267 (14%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60
           M  K   +  +   +     D+GV          A    +   + + +A  P+  +    
Sbjct: 225 MPQKYWKNLPEATLLPELIRDAGVRV-----REMAERAPEPVRRRVPAAPAPLPEVAT-- 277

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120
                          SL +L++  R    C L   +  T+     +   +M+IG  P D 
Sbjct: 278 --------------QSLAQLRTAARDCRRCELWQPATQTVFGEGPDDASVMVIGEQPGDE 323

Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEI 173
           +++SG+PF G  G + +  L  + + R + +++                +RN     ++ 
Sbjct: 324 EDLSGRPFVGPAGRLFNMALGELGVDREKFYVTNAVKHFRFEQRGKRRLHRNPERTHVQA 383

Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
           C   +  +   + P  ++ +G         +  +   Q  G+W  L       P L TVH
Sbjct: 384 CSGWLQAERAQLRPAQVVCLGATAAQAVLGSRFRLMQQ-RGQWQRL---DDGTPVLITVH 439

Query: 234 PQELIQYPLIK------KNTWHALITL 254
           P  +++ P         +     L  L
Sbjct: 440 PSWVLRQPSTDAREEGYRGFVEDLRRL 466


>gi|87125791|ref|ZP_01081634.1| Uracil-DNA glycosylase [Synechococcus sp. RS9917]
 gi|86166600|gb|EAQ67864.1| Uracil-DNA glycosylase [Synechococcus sp. RS9917]
          Length = 341

 Score =  146 bits (368), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 87/230 (37%), Gaps = 13/230 (5%)

Query: 37  YESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHE--LKSLLRSFHDCHLCS 94
             ++++    +  +      R +       A        + ++  L +  R    C L  
Sbjct: 105 EPARQEPFGAECWLADPEGNRLLLLSTAASATKAHSNDDTTNDTTLATACRQCQACDLAG 164

Query: 95  TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HIS 153
           +    + +  +    LM+IG  P  S++  G+PF G++G +LD++L+          +I 
Sbjct: 165 SRRQVVISRGSAAAPLMLIGEAPGASEDAEGRPFVGRSGRLLDQLLRETGFNPDHDLYIC 224

Query: 154 MISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL 213
                 PPGNR     E+  CRP + +QI L++P ++  +G+                  
Sbjct: 225 NAVKCRPPGNRKPKRQELAACRPWLEQQIALVNPAVVALLGSTALAAVLEERG-PITGLR 283

Query: 214 GKWSNLCTPHSIIPTLATVHPQELIQYPLIKK-----NTWHALITLKKAL 258
           G+W            +   HP  L++ P  +       T   L  +++ L
Sbjct: 284 GQWIERDGRAW----MPLFHPSYLLRNPSTQPGRPLDLTRSDLRQIRERL 329


>gi|223939226|ref|ZP_03631107.1| phage SPO1 DNA polymerase-related protein [bacterium Ellin514]
 gi|223892058|gb|EEF58538.1| phage SPO1 DNA polymerase-related protein [bacterium Ellin514]
          Length = 201

 Score =  146 bits (368), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 51/205 (24%), Positives = 81/205 (39%), Gaps = 9/205 (4%)

Query: 60  HSPLVQQADSIAQK--ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117
              ++Q A   A+      L  L S +R    C L  +    +         +MIIG  P
Sbjct: 3   SRSVIQSAPGPAKSKVVKELESLDSKIRVCTACPLYKSRTLAVPGEGKFNSKVMIIGEAP 62

Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP- 176
             +++++G+PF G +G  LD +L+  E  R+   I+ I    PP NR     E+E C   
Sbjct: 63  GRNEDLTGRPFVGSSGKFLDHVLEGSEFDRSDFFITNICKCRPPSNRTPKTGEIETCTSL 122

Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236
            + RQIELI+P+I++ +G             +  +           H     L T HP  
Sbjct: 123 YLYRQIELINPRIIVLLGGVAVKKMLGKKTVEEARCG------IVEHEGRKFLVTYHPAV 176

Query: 237 LIQYPLIKKNTWHALITLKKALKNL 261
                 + +        LK  +K L
Sbjct: 177 RFYREELAEKIKEDFALLKSEMKKL 201


>gi|269836973|ref|YP_003319201.1| phage SPO1 DNA polymerase-like protein [Sphaerobacter thermophilus
           DSM 20745]
 gi|269786236|gb|ACZ38379.1| phage SPO1 DNA polymerase-related protein [Sphaerobacter
           thermophilus DSM 20745]
          Length = 202

 Score =  146 bits (368), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 42/184 (22%), Positives = 75/184 (40%), Gaps = 6/184 (3%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            SL  + + +R    C L     + +        ++M IG  P   ++  G PF G  G 
Sbjct: 3   ASLDTIAARVRVCTQCELHRMRTNAVPGNGNPNAEVMFIGEGPGWHEDRQGLPFVGAAGQ 62

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
            L++MLQSI + R ++ I+ I    PPGNR+    E+  C   +  QI  I PK+++ +G
Sbjct: 63  FLNEMLQSIGLSRDEVFITNIVKCRPPGNRDPLPDEIAACSAYLDAQIAAIKPKVIVTLG 122

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
             +   +F N+         +          +  +   HP   +    ++      +  L
Sbjct: 123 RFSMARWFPNERIS------RIHGQPRRFGDVVVVPMYHPAAALHQSSLRATIEADMAKL 176

Query: 255 KKAL 258
            + L
Sbjct: 177 PQIL 180


>gi|58039995|ref|YP_191959.1| bacteriophage-type DNA polymerase [Gluconobacter oxydans 621H]
 gi|58002409|gb|AAW61303.1| Bacteriophage-type DNA polymerase [Gluconobacter oxydans 621H]
          Length = 281

 Score =  146 bits (367), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 71/279 (25%), Positives = 122/279 (43%), Gaps = 21/279 (7%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSID--------SAIQ 51
           MT + ++S+ ++L       + G      + P +  +  + R   S+         +A +
Sbjct: 1   MTPQPVVSRAELLAALQLQYEWGADEALCELPVDRLSEAAPRLPASMPQREGEGQRTAAR 60

Query: 52  PITNIRHIHSPLVQQADSIA---------QKACSLHELKSLLRSFHDCHLCSTSLSTICA 102
           P+  +     P   +   +A         +KA  L  L  L  +  D  L  T+   +  
Sbjct: 61  PLPEMWDGTRPAGAKVTGVATGSLSLQALEKAPDLPTLMRLTEAPDDLFLARTATHRLEP 120

Query: 103 TQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG 162
              E    M+IG  P   ++ SG  F+G+ G +L+KML+S  + R QI ++   PW PPG
Sbjct: 121 VFVEDAPFMLIGEAPDADEDRSGTLFAGEAGALLEKMLRSAGLERGQISMAPALPWRPPG 180

Query: 163 NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP 222
            R  S+ EM+ C P+++R I L  P+ L+ +G          DA    +  GKW+ +  P
Sbjct: 181 GRTPSDTEMQACHPLLLRTIALCRPRFLVTMGVTPLKMLLGPDAAV-GRLRGKWTEVSVP 239

Query: 223 H--SIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
              + +P L   HP +L      ++N W  L+ L + L 
Sbjct: 240 GLATPVPLLPMRHPLQLRASAAARRNAWQDLLILMEKLA 278


>gi|325919263|ref|ZP_08181307.1| uracil-DNA glycosylase, family 4 [Xanthomonas gardneri ATCC 19865]
 gi|325550268|gb|EGD21078.1| uracil-DNA glycosylase, family 4 [Xanthomonas gardneri ATCC 19865]
          Length = 479

 Score =  146 bits (367), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 78/237 (32%), Gaps = 17/237 (7%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P      E  R+       +             V  A        SL +L+   R    C
Sbjct: 234 PEASLLPELIREAGVRVREMAERAPEPVRRRVPVAPAPIPEVATQSLAQLRVAARDCRRC 293

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150
            L   +  T+         +M+IG  P D +++SG+PF G  G + +  L  I I R  +
Sbjct: 294 ALWQPATQTVFGEGPNDASVMVIGEQPGDEEDLSGRPFVGPAGRLFNMALGEIGIDRATV 353

Query: 151 HISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
           +++                +RN     ++ C   +  +   + P  ++ +G         
Sbjct: 354 YVTNAVKHFRFEQRGKRRLHRNPERAHVQACSGWLHAERAQLRPAQIVCLGATAAQAVLG 413

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK------KNTWHALITL 254
               +  +  G+W  L       P L TVHP  +++ P         +     L  L
Sbjct: 414 -SGFRLMRERGQWQRL---DDGTPVLTTVHPSWVLRQPTTAAREEGYRGFVEDLRQL 466


>gi|86358569|ref|YP_470461.1| putative uracil DNA glycosylase protein [Rhizobium etli CFN 42]
 gi|86282671|gb|ABC91734.1| putative uracil DNA glycosylase protein [Rhizobium etli CFN 42]
          Length = 484

 Score =  146 bits (367), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 90/239 (37%), Gaps = 17/239 (7%)

Query: 35  ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94
           A+ ES+ +  +   A Q +     +              A +L  L++       C L +
Sbjct: 248 ASAESKVRAMAAREATQSLPFHERLQQAARNLPAEPELPAGTLEALRAEAAVCMRCPLHA 307

Query: 95  TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154
            +  T+         +M +G  P D ++I+G+PF G  G + D+++    I R+ ++++ 
Sbjct: 308 NATQTVFGEGPRDAAVMFVGEQPGDQEDIAGRPFVGPAGKLFDQVIAEAGIDRSMLYVTN 367

Query: 155 ISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207
                          ++  +  E++ CR  +  ++ L+ PK+++ +G        +   +
Sbjct: 368 AVKHFKYEPRGKRRIHQKPTMGEVKQCRWWLDLELALVKPKLIVAMGATALAALTDVTGR 427

Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH------ALITLKKALKN 260
                 GK   +            VHP  L++ P  +            ++ ++  +K 
Sbjct: 428 LQ-DVRGKAMAIE---GGRTLFVIVHPSYLLRIPDERLKAEEMLRFRQDMMEIRGLMKA 482


>gi|73748279|ref|YP_307518.1| putative uracil-DNA glycosylase [Dehalococcoides sp. CBDB1]
 gi|73659995|emb|CAI82602.1| putative uracil-DNA glycosylase [Dehalococcoides sp. CBDB1]
          Length = 206

 Score =  146 bits (367), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 6/190 (3%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
            K   L  +   +     C+L +T   ++         +M IG  P  +++  G+PF G 
Sbjct: 3   DKEELLKGIYIEIARCVRCNLHTTRTCSVPGEGNADAKIMFIGEAPGFNEDQQGRPFVGA 62

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191
            G  L +++ SI + R  ++I+ +    PPGNR+    E+  C   + RQIE+I PKI++
Sbjct: 63  AGKFLTELICSIGLTREDVYITNVVKDRPPGNRDPLPDEISACCNFLDRQIEIIKPKIIV 122

Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
            +G  +   +F            K          I      HP   +    ++K     +
Sbjct: 123 TLGRFSMARYFTGITIS------KIHGQPMRRDGIIYYPMYHPAAALHQGGLRKEIEQDM 176

Query: 252 ITLKKALKNL 261
           + + + L+ L
Sbjct: 177 LRIPRLLEEL 186


>gi|307293602|ref|ZP_07573446.1| phage SPO1 DNA polymerase-related protein [Sphingobium
           chlorophenolicum L-1]
 gi|306879753|gb|EFN10970.1| phage SPO1 DNA polymerase-related protein [Sphingobium
           chlorophenolicum L-1]
          Length = 465

 Score =  146 bits (367), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 83/245 (33%), Gaps = 12/245 (4%)

Query: 24  VYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSL 83
           +  +  E   +            +           + +   + A      A +   L+  
Sbjct: 218 IGAMLSEMPRKYWRNLPEAALIPELVAGAQAREAAMIATPARPAARRGNAAPAWQALRDE 277

Query: 84  LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143
                 C L   +  T+         LM IG  P D ++++G+PF G  G + D+ L+  
Sbjct: 278 AMGCTRCPLYRDTTQTVFGEGPVDAPLMFIGEQPGDQEDLAGRPFVGPAGQLFDRALEEA 337

Query: 144 EIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            I R Q +++                ++     E++ CR  + +++ELI P+I++ +G  
Sbjct: 338 GIDRRQAYVTNAVKHFKHERRGKRRIHQTPETPEIQACRWWLTQELELIRPRIIVALGAT 397

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                    A    +  G    L           TVHP  L++ P   +          +
Sbjct: 398 AGRALLG-KAVTISRVRGAPIALEGGAQG---WITVHPSYLLRVPDEARKAEE-RKRFVE 452

Query: 257 ALKNL 261
            L+ +
Sbjct: 453 ELREI 457


>gi|282163588|ref|YP_003355973.1| uracil-DNA glycosylase [Methanocella paludicola SANAE]
 gi|282155902|dbj|BAI60990.1| uracil-DNA glycosylase [Methanocella paludicola SANAE]
          Length = 182

 Score =  145 bits (366), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 41/179 (22%), Positives = 71/179 (39%), Gaps = 5/179 (2%)

Query: 82  SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
             +     C L  +  + +  +      +M+IG  P  +++  G+PF G  G  L+++L+
Sbjct: 9   DDVLHCPRCDLKLSRTNVVVGSGPINAKIMLIGEAPGKNEDKQGQPFVGAAGRNLNELLE 68

Query: 142 SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
              I R  ++I+ I    PP NR   + E+E C P + +QIE+I PK ++ +G       
Sbjct: 69  EAGIDRKDVYITNIVKCRPPENRPPFDYEVEACHPYLQKQIEVIGPKGIVLLGKTAAETM 128

Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
                +      GK             L T HP  +I    +K         +   L  
Sbjct: 129 LGRKVEM-----GKEHGTVVEKDGHRYLITYHPAAMIYKRTLKDTLVEDYKKISALLAE 182


>gi|78049381|ref|YP_365556.1| uracil DNA glycosylase superfamily protein [Xanthomonas campestris
           pv. vesicatoria str. 85-10]
 gi|78037811|emb|CAJ25556.1| uracil DNA glycosylase superfamily protein [Xanthomonas campestris
           pv. vesicatoria str. 85-10]
          Length = 478

 Score =  145 bits (366), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 93/267 (34%), Gaps = 38/267 (14%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60
           M  K   +  +   +     ++GV          A    +   + + +A  P+ ++    
Sbjct: 225 MPQKYWKNLPEATLLPELIREAGVRV-----REMAERAPEPVRRRVPAAPAPLPDVVT-- 277

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120
                          SL +L++  R    C L   +  T+     +   +M+IG  P D 
Sbjct: 278 --------------QSLAQLRTAARDCRRCELWQPATQTVFGEGPDDASVMVIGEQPGDE 323

Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEI 173
           +++SG+PF G  G + +  L  + + R + +++                +RN     ++ 
Sbjct: 324 EDLSGRPFVGPAGRLFNMALGELGVDREKFYVTNAVKHFRFEQRGKRRLHRNPERTHVQA 383

Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
           C   +  +   + P  ++ +G         +  +   +  G+W  L       P L TVH
Sbjct: 384 CSGWLQAERAQLRPAQIVCLGATAAQAVLGSSFRLM-RERGQWQRL---DDGTPVLTTVH 439

Query: 234 PQELIQYPLIK------KNTWHALITL 254
           P  +++ P         +     L  L
Sbjct: 440 PSWVLRQPSTDAREEGYRGFVEDLRRL 466


>gi|77462785|ref|YP_352289.1| putative uracil-DNA glycosylase [Rhodobacter sphaeroides 2.4.1]
 gi|77387203|gb|ABA78388.1| putative uracil-DNA glycosylase [Rhodobacter sphaeroides 2.4.1]
          Length = 474

 Score =  145 bits (366), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 83/241 (34%), Gaps = 17/241 (7%)

Query: 34  EATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLC 93
           E   E Q    +   A       +   +     A        +L E K+       C L 
Sbjct: 237 ERAAEMQAAAPTEPPARTAAVARQRAAAAGGPAAAGDGSAPGTLAEAKTAAEGCRRCGLW 296

Query: 94  STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHIS 153
           + +   +         +MI+G  P D ++++G+PF G  G + D+   +  + R  ++++
Sbjct: 297 ANATQVVFGEGPATARMMIVGEQPGDREDLAGRPFVGPAGQLFDEEAAAAGLDRGSVYVT 356

Query: 154 MISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206
                           ++     E+  CR  +  + +L+ P++++ +G            
Sbjct: 357 NAVKHFKFAPRGKRRIHQKPDAGEVTACRWWLDLERDLVRPRLIVAMGATALASLTG-SG 415

Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP------LIKKNTWHALITLKKALKN 260
               +  G    L       P   TVHP  +++ P        ++     L   ++ L+ 
Sbjct: 416 AGILKRRGSVERL---DDGTPVFVTVHPSYILRLPDEAARVEERRRFRDDLQAARQLLER 472

Query: 261 L 261
           L
Sbjct: 473 L 473


>gi|270307805|ref|YP_003329863.1| uracil DNA glycosylase superfamily, DNA polymerase
           bacteriophage-type [Dehalococcoides sp. VS]
 gi|270153697|gb|ACZ61535.1| uracil DNA glycosylase superfamily, DNA polymerase
           bacteriophage-type [Dehalococcoides sp. VS]
          Length = 206

 Score =  145 bits (366), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 44/190 (23%), Positives = 78/190 (41%), Gaps = 6/190 (3%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
            K   L  + S +     C L +T   ++         +M IG  P  +++  G+PF G 
Sbjct: 3   DKEELLKGVYSEITRCVRCKLHTTRTRSVPGEGNADAKIMFIGEAPGFNEDQQGRPFVGA 62

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191
            G  L +++ SI + R  ++I+ +    PPGNR+    E+  CR  + RQIE+I PKI++
Sbjct: 63  AGKFLTELIHSIGLTREDVYITNVVKDRPPGNRDPLPDEISACRNFLDRQIEIIKPKIIV 122

Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
            +G  +   +F            K          I      HP   +    ++K     +
Sbjct: 123 TLGRYSMARYFTGITIS------KIHGQPMRRDGIIYYPMYHPAAALHQGGLRKEIEQDM 176

Query: 252 ITLKKALKNL 261
           + +   +  L
Sbjct: 177 LRIPGLVAEL 186


>gi|166713584|ref|ZP_02244791.1| DNA polymerase related protein [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 481

 Score =  145 bits (365), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 79/237 (33%), Gaps = 17/237 (7%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P      E  R+       +                A        SL +L+S  R    C
Sbjct: 234 PEAALLPELIREAGVRVREMAERAPAPVRRRVPAAPAPQPDTTTHSLAQLRSAARDCRRC 293

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150
            L   +  T+     +   +M+IG  P D +++SG+PF G  G +    L  + + R + 
Sbjct: 294 ELWQPATQTVFGEGPDDASVMVIGEQPGDEEDLSGRPFVGPAGRLFTMALGELGVDRQRF 353

Query: 151 HISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
           +++                +RN     ++ C   +  +   + P  ++ +G         
Sbjct: 354 YVTNAVKHFRFEQRGKRRLHRNPERAHVQACSGWLQAERTQLRPAQIVCLGATAAQAVLG 413

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK------KNTWHALITL 254
               +  Q  G+W  L       P LATVHP  +++ P         +     L  L
Sbjct: 414 -SGFRLMQERGQWQRL---DDGTPILATVHPSWVLRQPSTDAREEGYRGFVEDLRQL 466


>gi|116253162|ref|YP_769000.1| helicase/glycosylase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115257810|emb|CAK08908.1| putative helicase/glycosylase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 484

 Score =  145 bits (365), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 96/237 (40%), Gaps = 17/237 (7%)

Query: 35  ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94
           A+ ES+ +  +   A Q +     +              A +L  L++       C L +
Sbjct: 248 ASAESKVRAMAAREATQSLPFHDRLQEAARGIPAEPEAPAGTLEALRAEAAGCTRCPLHA 307

Query: 95  TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154
            +  T+        ++M++G  P D ++I+G+PF G  G +LD+++    I R+ ++++ 
Sbjct: 308 KATQTVFGEGPLDAEVMLVGEQPGDQEDIAGRPFVGPAGRLLDQVITEAGIDRSMLYVTN 367

Query: 155 ISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207
                          ++  +  E++ CR  +  ++ LI PK+++ +G        +   +
Sbjct: 368 AVKHFKYEPRGKRRIHQKPNMGEVKHCRWWLNLEMALIKPKLVVAMGATALAALTDTKQR 427

Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK------KNTWHALITLKKAL 258
                 GK   +    +      TVHP  L++ P  +            ++T+++ +
Sbjct: 428 LQ-DVRGKAIAIDERRT---LFVTVHPSYLLRIPDERLKADELARFREDMLTIQRLM 480


>gi|289662533|ref|ZP_06484114.1| uracil DNA glycosylase superfamily protein [Xanthomonas campestris
           pv. vasculorum NCPPB702]
          Length = 481

 Score =  145 bits (365), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 81/237 (34%), Gaps = 17/237 (7%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P      E  R+       +             V  A        +L +L+S  R    C
Sbjct: 234 PEAALLPELIREAGVRVREMAERAPEPVRRRVPVAPAPMPDVATQNLAQLRSAARDCRRC 293

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150
            L   +  T+     +   +M+IG  P D +++SG+PF G  G + +  L  + + R + 
Sbjct: 294 ELWQPATQTVFGEGPDDASVMVIGEQPGDEEDLSGRPFVGPAGRLFNMALGELGVDRERF 353

Query: 151 HISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
           +++                +RN     ++ C   +  +   + P  ++ +G         
Sbjct: 354 YVTNAVKHFRFEQRGKRRLHRNPERTHVQACSGWLQAERAQLRPAQIICLGATAAQAVLG 413

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK------KNTWHALITL 254
           +  +   Q  G+W  L       P L TVHP  +++ P         +     L  L
Sbjct: 414 SSFRLM-QERGQWQRLE---DGTPVLTTVHPSWVLRQPSTDAREEGYRGFVEDLRRL 466


>gi|91976376|ref|YP_569035.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas
           palustris BisB5]
 gi|91682832|gb|ABE39134.1| phage SPO1 DNA polymerase-related protein [Rhodopseudomonas
           palustris BisB5]
          Length = 480

 Score =  145 bits (365), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 79/231 (34%), Gaps = 24/231 (10%)

Query: 35  ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94
           A   +     +  +A +         S    + D        L  L+   R    C L  
Sbjct: 250 AERAAHAMIAAEATAPKKPQRQEQPMSRAGHEGDR-------LETLREQARDCRACDLWK 302

Query: 95  TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154
            +  T+         +M++G  P D ++++G PF G  G MLD+ L    I R + +++ 
Sbjct: 303 DATQTVFGEGPPHASVMLVGEQPGDKEDLAGHPFVGPAGQMLDRALAEAGIDRAETYVTN 362

Query: 155 ISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207
                          ++  +  E++ CRP   R++  + P++++ +G             
Sbjct: 363 AVKHFKFVPRGKIRLHQKPAMPEIKACRPWYERELAAVRPQLVVAMGATAAQSVLG-RIT 421

Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH------ALI 252
              +N G   +          L TVHP  L++ P               L 
Sbjct: 422 PINKNRGHLID---RDGGPQVLVTVHPSYLLRLPDDDAKAREYARFVDDLK 469


>gi|289669765|ref|ZP_06490840.1| uracil DNA glycosylase superfamily protein [Xanthomonas campestris
           pv. musacearum NCPPB4381]
          Length = 481

 Score =  144 bits (364), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 81/237 (34%), Gaps = 17/237 (7%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P      E  R+       +             V  A        +L +L+S  R    C
Sbjct: 234 PEAALLPELIREAGVRVREMAERAPEPVRRRVPVAPAPMPDVATQNLAQLRSAARDCRRC 293

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150
            L   +  T+     +   +M+IG  P D +++SG+PF G  G + +  L  + + R + 
Sbjct: 294 ELWQPATQTVFGEGPDDASVMVIGEQPGDEEDLSGRPFVGPAGRLFNMALGELGVDRERF 353

Query: 151 HISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
           +++                +RN     ++ C   +  +   + P  ++ +G         
Sbjct: 354 YVTNAVKHFRFEQRGKRRLHRNPERTHVQACSGWLQAERAQLRPAQIICLGATAAQAVLG 413

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK------KNTWHALITL 254
           +  +   Q  G+W  L       P L TVHP  +++ P         +     L  L
Sbjct: 414 SSFRLM-QERGQWQRLE---DGTPVLTTVHPSWVLRQPSTDAREEGYRGFVEDLRRL 466


>gi|147669059|ref|YP_001213877.1| phage SPO1 DNA polymerase-related protein [Dehalococcoides sp.
           BAV1]
 gi|146270007|gb|ABQ16999.1| phage SPO1 DNA polymerase-related protein [Dehalococcoides sp.
           BAV1]
          Length = 206

 Score =  144 bits (364), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 43/190 (22%), Positives = 78/190 (41%), Gaps = 6/190 (3%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
            K   L  +   +     C+L +T   ++         +M IG  P  +++  G+PF G 
Sbjct: 3   DKEELLKGIYIEIARCVRCNLHTTRTCSVPGEGNADAKIMFIGEAPGFNEDQQGRPFVGA 62

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191
            G  L +++ SI + R  ++I+ +    PPGNR+    E+  C   + RQIE+I PKI++
Sbjct: 63  AGKFLTELICSIGLTREDVYITNVVKDRPPGNRDPLPDEISACCNFLDRQIEIIKPKIIV 122

Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
            +G  +   +F            K          I      HP   +    ++K     +
Sbjct: 123 TLGRFSMARYFTGITIS------KIHGQPMRRDGIIYYPMYHPAAALHQGGLRKEIEQDM 176

Query: 252 ITLKKALKNL 261
           + +   L+ L
Sbjct: 177 LRIPGLLEEL 186


>gi|148242559|ref|YP_001227716.1| Uracil-DNA glycosylase [Synechococcus sp. RCC307]
 gi|147850869|emb|CAK28363.1| Uracil-DNA glycosylase [Synechococcus sp. RCC307]
          Length = 194

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 79/192 (41%), Gaps = 11/192 (5%)

Query: 74  ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
           + S   L +       C L +T  + +         +++IG  P   ++  G+PF G+ G
Sbjct: 2   SSSWPHLSAACHGCERCELATTRHNVVVGRGNPQARVLLIGEAPGQQEDEQGEPFVGRAG 61

Query: 134 NMLDKMLQSIEIM-RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192
            +L+K+L    +  R  ++I+ +    PP NR  +  E+E C P + +Q+EL+ P +++ 
Sbjct: 62  QLLEKLLGEAGLDSRRDLYIANVIKCRPPQNRKPTRTEIERCLPWLYQQLELLDPPLVVL 121

Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNT 247
            G                +  G+W            L   HP  L+++        ++ T
Sbjct: 122 AGATALQAVLGIKG-GISKLRGQWIEQQGRAY----LPVFHPSYLLRFGSRAPGAPQELT 176

Query: 248 WHALITLKKALK 259
              +  +++ L 
Sbjct: 177 LADMQDVRRRLD 188


>gi|94970381|ref|YP_592429.1| phage SPO1 DNA polymerase-related protein [Candidatus Koribacter
           versatilis Ellin345]
 gi|94552431|gb|ABF42355.1| phage SPO1 DNA polymerase-related protein [Candidatus Koribacter
           versatilis Ellin345]
          Length = 217

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 43/215 (20%), Positives = 83/215 (38%), Gaps = 17/215 (7%)

Query: 58  HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117
            +    VQ    +  K  SL  L    +   +C L  T   T+         ++ +G  P
Sbjct: 2   PMRRKPVQSELPLLMKPRSLEALAHDAKDCRNCDLWKTGTQTVFGEGGAHARVVFVGEQP 61

Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPG----NRNLSNIE 170
            D +++ G+PF G  GN+L+  L+   I R +++++       W P G    ++  +  E
Sbjct: 62  GDKEDLEGRPFVGPAGNLLNTALEQAGINRNEVYVTNAVKHFKWEPRGKRRLHKKPNAAE 121

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230
           +  CR  +  +I  I P+I++ +G           + +  +  G         +    LA
Sbjct: 122 VAACRSWMDGEIAAIQPEIIVCLGATAAQAMLG-RSFRVTKQRG---EFLPGPNGASVLA 177

Query: 231 TVHPQELIQYP------LIKKNTWHALITLKKALK 259
           TVHP  +++ P         +     L  +   + 
Sbjct: 178 TVHPSSILRAPDEDARHEEMRLFVDDLRKVAARMN 212


>gi|75676446|ref|YP_318867.1| phage SPO1 DNA polymerase-related protein [Nitrobacter winogradskyi
           Nb-255]
 gi|74421316|gb|ABA05515.1| phage SPO1 DNA polymerase-related protein [Nitrobacter winogradskyi
           Nb-255]
          Length = 225

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 83/223 (37%), Gaps = 17/223 (7%)

Query: 50  IQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD 109
           I     +        Q     +    SL  L+        C L   +  T+         
Sbjct: 2   IATEATMPRKPQKREQPMARQSSAHDSLPSLREEAAGCRACPLWKDATQTVFGEGLAHAQ 61

Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG------- 162
           +M++G  P D ++++GKPF G  G MLD+ L+   I RT+++++                
Sbjct: 62  VMLVGEQPGDKEDLAGKPFIGPAGQMLDRALKEAGIDRTKVYVTNAVKHFKFVPRGKIRL 121

Query: 163 NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP 222
           ++  +  E+  CRP   R++  ++P +++ +G+      F        ++ G+  ++   
Sbjct: 122 HQKPNTPEIRACRPWYERELAAVNPALVVAMGSTAAQSVFG-KITPINKSRGRLIDMK-- 178

Query: 223 HSIIPTLATVHPQELIQYPLIKKNTWH------ALITLKKALK 259
                 L TVHP  L++ P               L      L+
Sbjct: 179 -DGRKALVTVHPSYLLRLPDQDDRAREYKRFVDDLKIAATHLQ 220


>gi|302382564|ref|YP_003818387.1| phage SPO1 DNA polymerase-related protein [Brevundimonas
           subvibrioides ATCC 15264]
 gi|302193192|gb|ADL00764.1| phage SPO1 DNA polymerase-related protein [Brevundimonas
           subvibrioides ATCC 15264]
          Length = 481

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 84/237 (35%), Gaps = 17/237 (7%)

Query: 35  ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94
           A+ +           +        +   +        Q    L EL+  ++    C L  
Sbjct: 249 ASRDRTETMVDSAPTLPNAKLASAVAPDVRGGGLDDQQIVGDLGELRQAIQGCRRCPLWR 308

Query: 95  TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154
            +   +C     G  LMI+G  P D ++++G PF G  G +LD  L+   I R+ ++++ 
Sbjct: 309 DATQGVCGVGPVGARLMIVGEQPGDQEDLAGLPFVGPAGQVLDAALEEAGIDRSDVYVTN 368

Query: 155 ISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207
                          ++  +  E+  CR  + ++  L+ P + L +G        N    
Sbjct: 369 AVKHFKHEPRGKRRLHKTPNAGEVTACRWWLDQERTLVRPSLTLTLGATAAFAVLNQKVA 428

Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH------ALITLKKAL 258
              +  G+   L         + TVHP  L++ P  +            L+ ++  L
Sbjct: 429 VM-KTRGEPLPLP---DGSRAMVTVHPSYLLRLPDEEARVRERAAFVRDLVKVRALL 481


>gi|289432328|ref|YP_003462201.1| phage SPO1 DNA polymerase-related protein [Dehalococcoides sp. GT]
 gi|288946048|gb|ADC73745.1| phage SPO1 DNA polymerase-related protein [Dehalococcoides sp. GT]
          Length = 206

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 43/190 (22%), Positives = 78/190 (41%), Gaps = 6/190 (3%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
            K   L  +   +     C+L +T   ++         +M IG  P  +++  G+PF G 
Sbjct: 3   DKEELLKGIYIEIARCVRCNLHTTRTCSVPGEGNADAKIMFIGEAPGFNEDQQGRPFVGA 62

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191
            G  L +++ SI + R  ++I+ +    PPGNR+    E+  C   + RQIE+I PKI++
Sbjct: 63  AGKFLTELICSIGLTREDVYITNVVKDRPPGNRDPLPDEISACCNFLDRQIEIIKPKIIV 122

Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
            +G  +   +F            K          I      HP   +    ++K     +
Sbjct: 123 TLGRFSMARYFTGITIS------KIHGQPMRRDGIIYYPMYHPAAALHQGGLRKEIEQDM 176

Query: 252 ITLKKALKNL 261
           + +   L+ L
Sbjct: 177 LRIPGLLEEL 186


>gi|116070628|ref|ZP_01467897.1| Phage SPO1 DNA polymerase-related protein [Synechococcus sp. BL107]
 gi|116066033|gb|EAU71790.1| Phage SPO1 DNA polymerase-related protein [Synechococcus sp. BL107]
          Length = 187

 Score =  144 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 66/183 (36%), Gaps = 11/183 (6%)

Query: 82  SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
                   C L  T    +         LM+IG  P   ++ SG PF G++G  LD++L 
Sbjct: 7   DACLRCSACELARTRQQVVVCRGNPSAPLMLIGEAPGAQEDQSGVPFVGRSGQALDRLLI 66

Query: 142 SIEIM-RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF 200
                    ++I       PP NR     E+  CRP + +QI  ++P +++  G      
Sbjct: 67  EAGFNIEQDLYICNAVKCRPPNNRRPKKNELAACRPWLDKQIAEVNPAVIVLTGATAVQA 126

Query: 201 FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK-----KNTWHALITLK 255
                     +  G+W            +   HP  L+++   K     + T   L  ++
Sbjct: 127 VL-EKKAAMTELRGQWQTWQ----GRSVMPIFHPAYLLRHASSKEGGPVELTRQDLSAVR 181

Query: 256 KAL 258
             L
Sbjct: 182 TKL 184


>gi|153005432|ref|YP_001379757.1| phage SPO1 DNA polymerase-like protein [Anaeromyxobacter sp.
           Fw109-5]
 gi|152029005|gb|ABS26773.1| phage SPO1 DNA polymerase-related protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 260

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 88/238 (36%), Gaps = 17/238 (7%)

Query: 36  TYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCST 95
           +      ++  + A                 A +      SL  L+   R    C L   
Sbjct: 18  SVPPAPAQRMAERAGGAPRPTAAEPRSRGASAVAPVPADASLASLREAARGCRACPLWER 77

Query: 96  SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMI 155
           +  T+        +++++G  P + ++++G PF G  G +LDK L +  I R +++++  
Sbjct: 78  ATQTVFGEGPSRAEVVLVGEQPGNEEDLAGLPFVGPAGRLLDKALAAAGIDRRRVYVTNA 137

Query: 156 SPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQK 208
                         ++  +  E+  CRP +  ++ L+ P+ ++ +G             +
Sbjct: 138 VKHFKWEPRGKRRIHQKPNAGEVRACRPWLDAELRLVRPRAVVCLGATAAQALLG-KGFR 196

Query: 209 TYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT------WHALITLKKALKN 260
             ++ G              LATVHP  +++ P  +            L  + +AL++
Sbjct: 197 VTRSRG---EPLASPLAPIVLATVHPSAILRAPDDETRAAELSRFVEDLRRVAEALRS 251


>gi|188993245|ref|YP_001905255.1| Uracil DNA glycosylase superfamily protein,probable [Xanthomonas
           campestris pv. campestris str. B100]
 gi|167735005|emb|CAP53217.1| Uracil DNA glycosylase superfamily protein,probable [Xanthomonas
           campestris pv. campestris]
          Length = 472

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 82/234 (35%), Gaps = 17/234 (7%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P      E  R+       +                A   A  A SL +L+   R    C
Sbjct: 234 PEATLLPELIREAGVRVREMAERAPEPVRRRVPATPAALPAVAAQSLAQLRVAARDCRRC 293

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150
            L   +  T+     +   +M+IG  P D +++SG+PF G  G + ++ L  + I R + 
Sbjct: 294 DLWQPATQTVFGEGPDDAAVMVIGEQPGDEEDLSGRPFVGPAGRLFNQALGELGIDRQRF 353

Query: 151 HISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
           +++                +RN     ++ C   +  +   + P  ++ +G         
Sbjct: 354 YVTNAVKHFRFEQRGKRRLHRNPERSHVQACNGWLQAERAQLRPAQIVCLGATAAQAVLG 413

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY--PLIK----KNTWHAL 251
               +  Q  G+W  L       P LATVHP  +++   P  +    +     L
Sbjct: 414 P-GFRLMQERGQWQRL---DDGTPVLATVHPSWVLRQGTPSAREAGYRGFVADL 463


>gi|284044347|ref|YP_003394687.1| phage SPO1 DNA polymerase-related protein [Conexibacter woesei DSM
           14684]
 gi|283948568|gb|ADB51312.1| phage SPO1 DNA polymerase-related protein [Conexibacter woesei DSM
           14684]
          Length = 254

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 47/191 (24%), Positives = 80/191 (41%), Gaps = 1/191 (0%)

Query: 69  SIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128
           + A++   L E+     +   C L  T  + +        DLM +G  P  +++  G PF
Sbjct: 3   TAAERRERLKEVWREASTCTLCALSETRQTVVFGAGNADADLMFVGEAPGANEDRGGLPF 62

Query: 129 SGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188
            G+ G +LDK+LQ + + R  + I+ +    PPGNR+    E+  CR  + RQ+ELI PK
Sbjct: 63  IGQAGRLLDKLLQEVGLERADVFIANVLKCRPPGNRDPRPTEIATCRDYLHRQVELIEPK 122

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW 248
           ++  +GN +      +D     +  G+          +      HP   +  P +     
Sbjct: 123 VICTLGNFSTK-LLRDDPTGISRVHGQPEVHVLGRRAVRIFPIFHPAAALYTPSMLDTLR 181

Query: 249 HALITLKKALK 259
                L   L 
Sbjct: 182 ADFAQLPGLLA 192


>gi|320355015|ref|YP_004196354.1| Uracil-DNA glycosylase superfamily [Desulfobulbus propionicus DSM
           2032]
 gi|320123517|gb|ADW19063.1| Uracil-DNA glycosylase superfamily [Desulfobulbus propionicus DSM
           2032]
          Length = 315

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 92/269 (34%), Gaps = 21/269 (7%)

Query: 8   SQEQILTI-------ALFYADSGVYWVFDEP-------NNEATYESQRKEKSIDSAIQPI 53
            +  +L +          +   G+      P         +A    Q+K     +     
Sbjct: 38  DRAALLALGEGVRTLLRLHQQMGISHYPLTPGLGTFVRAKQARPNEQKKRMRPPAPTAAP 97

Query: 54  TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113
              +   +           ++  L  L+  +     C L +     + A  T    L++I
Sbjct: 98  VGKKTAPAATATAGQPPPTESDRLSVLRRDIEVCRLCPLAADRWGVVFAAGTAPARLLVI 157

Query: 114 GYTPSDSDNISGKP-FSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEME 172
           G         S    F G+   ML  M+++I +    I ++           +L    + 
Sbjct: 158 GGHSRQEGEYSPTILFGGQEDVMLWNMMRAIGLGSGDIVVTNAIKC--CPKADLPPESLH 215

Query: 173 ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS---IIPTL 229
            C   + R+I L+ P+++L +G +  +       +   +  G++       +    IP +
Sbjct: 216 ACTVHLRREIALVQPRVILAMGEEAAHAVLG-TGEPISRLRGRFHAARQDDANGVPIPVM 274

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKAL 258
            T HP+ L+  P +K+  W  L  +++ L
Sbjct: 275 VTFHPRFLLAQPAMKQAAWQDLQMIQRRL 303


>gi|33240466|ref|NP_875408.1| Uracil-DNA glycosylase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
 gi|33237994|gb|AAQ00061.1| Uracil-DNA glycosylase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
          Length = 202

 Score =  143 bits (360), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 75/181 (41%), Gaps = 11/181 (6%)

Query: 87  FHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI- 145
            H C L   +   + +      +LM+IG  P   ++ +G PF G++G +L+ +L++    
Sbjct: 12  CHSCGLDKDTCRIVVSRGDPTSNLMLIGEAPGAKEDETGIPFVGRSGKLLNILLENEGFD 71

Query: 146 MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
               + I  +    PP NR  +  E++   P + +QI+L+ P I++ IG+          
Sbjct: 72  YEKDVFICNLLKSRPPNNRTPTRQEIQNHIPWLYQQIKLVDPLIIVLIGSSALRAILGIK 131

Query: 206 AQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK-----KNTWHALITLKKALKN 260
           + K     G W N       I  +   HP  L++ P          T   L  + + L  
Sbjct: 132 S-KISDLRGTWHNWN----GIYAMPIFHPSYLLRNPSKTIGGPYNLTCLDLREVNRKLVE 186

Query: 261 L 261
           L
Sbjct: 187 L 187


>gi|307321350|ref|ZP_07600749.1| phage SPO1 DNA polymerase-related protein [Sinorhizobium meliloti
           AK83]
 gi|306892995|gb|EFN23782.1| phage SPO1 DNA polymerase-related protein [Sinorhizobium meliloti
           AK83]
          Length = 213

 Score =  142 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 75/200 (37%), Gaps = 17/200 (8%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
            +A ++  L+        C L   +   +         ++ +G  P D ++++G+PF G 
Sbjct: 17  AEATTIASLRRQAEGCERCDLYKNATQLVFGEGPVDARVVFVGEQPGDREDLAGRPFVGP 76

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIEL 184
            G +LD+ L    I R++ +++                +   +  E++ C   +  +++ 
Sbjct: 77  AGRILDECLHEAGIDRSECYLTNAVKHFKFEQRGKRRMHSRPNAGEIQACAWWLGAELDE 136

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ----- 239
           + P+I++ +G           +    +N G+             L T+HP  L++     
Sbjct: 137 LRPEIVVALGATALMSLLG-RSVGVTRNRGQLLTAP---GGFSVLVTIHPSYLLRIRGRS 192

Query: 240 YPLIKK-NTWHALITLKKAL 258
            P  ++      L  +   +
Sbjct: 193 DPEAERARFVDDLAKVATRI 212


>gi|269216098|ref|ZP_06159952.1| uracil-DNA glycosylase, family 4 [Slackia exigua ATCC 700122]
 gi|269130357|gb|EEZ61435.1| uracil-DNA glycosylase, family 4 [Slackia exigua ATCC 700122]
          Length = 211

 Score =  142 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 70/184 (38%), Gaps = 5/184 (2%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L E+   + +   C L     + +         +M++G  P  ++++ GKPF G  G  L
Sbjct: 23  LEEISDAVWACRRCELAEGRTNAVPGFGNASARIMLVGEAPGRNEDLQGKPFVGAAGKYL 82

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++L    + R ++ I+ +    PP NRN    E+E+C P +  Q+  I P+ L+ +GN 
Sbjct: 83  TELLGYAGLTREEVFIANVLKCRPPSNRNPRPEEIEVCTPFLRDQVRTIEPEYLVTMGNF 142

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
           +  F      +      G                  HP   I     +         L +
Sbjct: 143 STKFVL-RTERGITGLRGSVHVT----GPFKVFPVFHPAAAIYDRSKRDVLEADFRALGR 197

Query: 257 ALKN 260
            L N
Sbjct: 198 LLGN 201


>gi|72381948|ref|YP_291303.1| phage SPO1 DNA polymerase-related protein [Prochlorococcus marinus
           str. NATL2A]
 gi|72001798|gb|AAZ57600.1| phage SPO1 DNA polymerase-related protein [Prochlorococcus marinus
           str. NATL2A]
          Length = 187

 Score =  142 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 77/177 (43%), Gaps = 11/177 (6%)

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM-RTQ 149
            L ++    + +       LMIIG  P   +   G+PF G++G +LDK+LQ+  I     
Sbjct: 16  DLDNSINKIVVSRGNPFAKLMIIGEAPGAKEEEIGEPFVGRSGKLLDKLLQNAGIDINQD 75

Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209
           ++   +    PP NR  + IE++   P + +QI+L++P +++ +G           +   
Sbjct: 76  VYFCNVIKCRPPKNRRPTKIEIQENLPWLYQQIKLVNPSVIVLVGATALEAILKIKS-PI 134

Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK-----NTWHALITLKKALKNL 261
               G+W +          +   HP  L++ P  ++      T    + +K+ +  L
Sbjct: 135 SILRGEWIDWEGK----LVMPVFHPSYLLRNPSKEEGKPMSLTKSDFLKIKEKIDFL 187


>gi|51245612|ref|YP_065496.1| DNA polymerase [Desulfotalea psychrophila LSv54]
 gi|50876649|emb|CAG36489.1| related to DNA polymerase, bacteriophage-type [Desulfotalea
           psychrophila LSv54]
          Length = 269

 Score =  142 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 100/264 (37%), Gaps = 9/264 (3%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEP--NNEATYESQRKEKSIDSAIQPITNIRH 58
           M+ K I++   +  +  ++   G+    D     +   Y+++          Q ++    
Sbjct: 1   MSKKEIIT--DLYNLLQYHEILGIKEYPDREGLQDFLAYQAEAPATIPSPPPQAVSRPPK 58

Query: 59  IH--SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY- 115
                P+   A  + + A +  E   L +   +C L +   + +     +   L+++G  
Sbjct: 59  AREYRPVTPIATVVKEPAPTKTEGTDLKKLCANCGLQTRQQAFVAGKGGKQVRLLVVGGW 118

Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICR 175
               ++ +    F  +   ML +M  ++++    + ++ +              +++ C 
Sbjct: 119 RIDGNETLRSAVFGAEEDLMLARMFAAMKLPAANVFVTNLVKCALRVGDRPEAADIDSCL 178

Query: 176 PIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT-PHSIIPTLATVHP 234
            ++ RQIEL+ P+++  +G                   GK+  +       IP LAT HP
Sbjct: 179 RLLHRQIELLQPEMVCVMGTLAARKVLG-KPHSLSHLRGKFYQIELLKGQTIPVLATYHP 237

Query: 235 QELIQYPLIKKNTWHALITLKKAL 258
             L++   +K+ TW  L  +   L
Sbjct: 238 SYLLKNDEMKRPTWEDLQKVATRL 261


>gi|23011683|ref|ZP_00051971.1| COG1573: Uracil-DNA glycosylase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 152

 Score =  142 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 55/151 (36%), Positives = 80/151 (52%), Gaps = 2/151 (1%)

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170
           M +G  P   ++  GKPF G++G +LD+M+ +I + RT  ++S I PW PPGNRN +  E
Sbjct: 1   MFVGEAPGADEDRIGKPFMGRSGQLLDRMMAAIGLDRTTSYVSNIVPWRPPGNRNPTPQE 60

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP-HSIIPTL 229
           + ICRP I RQIEL +P IL+ +G                +  G++          I  L
Sbjct: 61  VSICRPFIERQIELANPDILVCLGAPATQTLTGTK-DGILKARGRFYPYRLGDGREIRAL 119

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
           AT+HP  L++ P+ K+  W     LK AL  
Sbjct: 120 ATLHPAYLLRQPVQKRLAWRDFRMLKAALDA 150


>gi|78184753|ref|YP_377188.1| Phage SPO1 DNA polymerase-related protein [Synechococcus sp.
           CC9902]
 gi|78169047|gb|ABB26144.1| Phage SPO1 DNA polymerase-related protein [Synechococcus sp.
           CC9902]
          Length = 187

 Score =  142 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 67/183 (36%), Gaps = 11/183 (6%)

Query: 82  SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
                   C L +T    +         LM+IG  P   ++ +G PF G++G  LD++L 
Sbjct: 7   DACLRCSACELATTRQKVVVYRGNPKAPLMLIGEAPGAQEDQTGLPFKGRSGQALDRLLI 66

Query: 142 SIEIM-RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF 200
                    ++I       PP NR     E+  CRP + +QI  ++P +++  G      
Sbjct: 67  EAGFNIEKDLYICNAVKCRPPNNRRPKKTELTACRPWLDKQIAEVNPAVIVLTGATAVQA 126

Query: 201 FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK-----KNTWHALITLK 255
                     +  GKW            +   HP  L+++   K     + T   L  ++
Sbjct: 127 LLELKT-AMTELRGKWQTWQ----GRSVMPIFHPAYLLRHASAKEGGPVELTRQDLSAVR 181

Query: 256 KAL 258
             L
Sbjct: 182 TKL 184


>gi|124025440|ref|YP_001014556.1| Uracil-DNA glycosylase [Prochlorococcus marinus str. NATL1A]
 gi|123960508|gb|ABM75291.1| Uracil-DNA glycosylase [Prochlorococcus marinus str. NATL1A]
          Length = 187

 Score =  142 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 77/177 (43%), Gaps = 11/177 (6%)

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM-RTQ 149
            L ++    + +       LMIIG  P   +   G+PF G++G +LDK+LQ+  I     
Sbjct: 16  DLDNSINKIVVSRGNPFAKLMIIGEAPGAKEEEIGEPFVGRSGKLLDKLLQNAGIDINQD 75

Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209
           ++   +    PP NR  + IE++   P + +QI+L++P +++ +G           +   
Sbjct: 76  VYFCNVVKCRPPKNRRPTKIEIQENLPWLYQQIKLVNPSVIVLVGATALEAILKIKS-PI 134

Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK-----NTWHALITLKKALKNL 261
               G+W +          +   HP  L++ P  ++      T    + +K+ +  L
Sbjct: 135 SILRGEWIDWEGK----LVMPVFHPSYLLRNPSKEEGKPMSLTKSDFLKIKEKIDFL 187


>gi|299134859|ref|ZP_07028051.1| phage SPO1 DNA polymerase-related protein [Afipia sp. 1NLS2]
 gi|298590669|gb|EFI50872.1| phage SPO1 DNA polymerase-related protein [Afipia sp. 1NLS2]
          Length = 217

 Score =  142 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 76/197 (38%), Gaps = 17/197 (8%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            SL +L+        CHL   +  T+         +M++G  P D ++++GKPF G  G 
Sbjct: 18  ESLADLREEAAHCRACHLYKDATQTVFGEGAAHAPIMLVGEQPGDKEDLAGKPFVGPAGQ 77

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISP 187
           +L + L   +I R +++I+                ++  +  E+  CR    R++  + P
Sbjct: 78  VLARGLDEAKIPRNKVYITNAVKHFKFVLRGKVRLHQKPNTSEIRACRQWYERELLAVKP 137

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247
            +++ +G       F        +N G + +L         L TVHP  L++ P      
Sbjct: 138 ALVVAMGATAAQCVFG-KITPIGKNRGHFLDLTED---TKALVTVHPSYLLRLPDADAKA 193

Query: 248 WH------ALITLKKAL 258
                    L    + +
Sbjct: 194 REYAHFVSDLKLAFEYI 210


>gi|294010642|ref|YP_003544102.1| DNA polymerase bacteriophage-type [Sphingobium japonicum UT26S]
 gi|292673972|dbj|BAI95490.1| DNA polymerase bacteriophage-type [Sphingobium japonicum UT26S]
          Length = 464

 Score =  142 bits (358), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 80/233 (34%), Gaps = 11/233 (4%)

Query: 24  VYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSL 83
           V  +  E   +            +      +    + +   + +      A +   L+  
Sbjct: 217 VGAMLSEMPRKYWRNLPEAALIPELVAGAQSREAAMIATPPKPSARQGNAAAAWSALREE 276

Query: 84  LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143
                 C L   +  T+         LM IG  P D ++++G+PF G  G + D  L+  
Sbjct: 277 AMGCTRCPLYRDTTQTVFGEGPVDAPLMFIGEQPGDQEDLAGRPFVGPAGQLFDYALEEA 336

Query: 144 EIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            I R + +I+                ++     E++ CR  + +++EL+ P+I++ +G  
Sbjct: 337 GIDRRRAYITNAVKHFKHERRGKRRIHQTPETPEIQACRWWLTQELELVRPRIIVALGAT 396

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249
                    A    +  G    L +         TVHP  L++ P   +    
Sbjct: 397 AGRALLG-KAVTISRVRGAPIALESGAQG---WITVHPSYLLRVPDEARKMEE 445


>gi|82702415|ref|YP_411981.1| phage SPO1 DNA polymerase-related protein [Nitrosospira multiformis
           ATCC 25196]
 gi|82410480|gb|ABB74589.1| phage SPO1 DNA polymerase-related protein [Nitrosospira multiformis
           ATCC 25196]
          Length = 209

 Score =  142 bits (357), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 84/212 (39%), Gaps = 16/212 (7%)

Query: 60  HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSD 119
             PL   +        ++  L+    +   CHL   +  T+         +M++G  P D
Sbjct: 2   KMPLPDTSHPAEHAGNTVASLRKAATNCRACHLWEHATQTVFGEGPSHASIMLVGEQPGD 61

Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEME 172
            ++ +G PF G  G++L   L ++ I R +++++                ++   + E+ 
Sbjct: 62  REDATGHPFVGPAGSILSHALTAVGISREEVYVTNAVKHFKFELRGKRRMHKKPIDTEIV 121

Query: 173 ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATV 232
            C   + R+IELI+P++++ +G           A     N GK        + +  L TV
Sbjct: 122 ACHAWLQREIELITPRLIIALGATAARSLLG-RATPVKVNRGKLLEYA---TGVSLLITV 177

Query: 233 HPQELIQYPLIKKN-----TWHALITLKKALK 259
           HP  L++ P   K+       + L   K  L 
Sbjct: 178 HPSFLLRMPEENKDEEYEHFVNDLNLAKPFLD 209


>gi|325915940|ref|ZP_08178236.1| uracil-DNA glycosylase, family 4 [Xanthomonas vesicatoria ATCC
           35937]
 gi|325537907|gb|EGD09607.1| uracil-DNA glycosylase, family 4 [Xanthomonas vesicatoria ATCC
           35937]
          Length = 479

 Score =  142 bits (357), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 83/242 (34%), Gaps = 25/242 (10%)

Query: 26  WVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLR 85
            +  E   EA    +   +     ++    +    +P V           SL +L++  R
Sbjct: 237 ALLPELIREAGVRVREMAERAPEPVRRRVPMTPAPTPDVAT--------QSLAQLRTAAR 288

Query: 86  SFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI 145
               C L   +  T+     +   +M+IG  P D +++SG+PF G  G +    L  + +
Sbjct: 289 DCRRCELWQPATQTVFGEGPDDASVMVIGEQPGDEEDLSGRPFVGPAGRLFTMALGELGV 348

Query: 146 MRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTK 198
            R   +++                +RN     ++ C   +  +   + P  ++ +G    
Sbjct: 349 DRQAFYVTNAVKHFRFEQRGKRRLHRNPERAHVQACSGWLQAERAQLRPAQIVCLGATAA 408

Query: 199 NFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI------KKNTWHALI 252
                    +  Q  G+W  L       P LATVHP  +++           +     L 
Sbjct: 409 QAVLG-SGFRLMQQRGQWQRL---DDGTPVLATVHPSWVLRQGSEVAREEGYRGFVQDLR 464

Query: 253 TL 254
            L
Sbjct: 465 QL 466


>gi|21244429|ref|NP_644011.1| DNA polymerase-like protein [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21110092|gb|AAM38547.1| DNA polymerase related protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 478

 Score =  141 bits (356), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 79/237 (33%), Gaps = 17/237 (7%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P      E  R        +                A        SL +L++  R    C
Sbjct: 234 PEATLLPELIRDAGMRVREMAERAPEPVRRRVPAAPAPLPEAATQSLAQLRTAARDCRRC 293

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150
            L   +  T+    ++   +M+IG  P D +++SG+PF G  G + +  L  + + R   
Sbjct: 294 ELWQPATQTVFGEGSDDASVMVIGEQPGDEEDLSGRPFVGPAGRLFNMALGELGVDRETF 353

Query: 151 HISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
           +++                +RN     ++ C   +  +   + P  ++ +G         
Sbjct: 354 YVTNAVKHFRFEQRGKRRLHRNPERTHVQACSGWLQAERAHLRPAQIVCLGATAAQAVLG 413

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK------KNTWHALITL 254
           +  +   Q  G+W  L       P L TVHP  +++ P         +     L  L
Sbjct: 414 SRFRLMQQ-RGQWQRL---DDGTPVLTTVHPSWVLRQPSTDAREEGYRGFVEDLRQL 466


>gi|16265025|ref|NP_437817.1| putative DNA polymerase related protein [Sinorhizobium meliloti
           1021]
 gi|15141164|emb|CAC49677.1| putative DNA polymerase related protein [Sinorhizobium meliloti
           1021]
          Length = 213

 Score =  141 bits (356), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 76/200 (38%), Gaps = 17/200 (8%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
            +A ++  L+        C L   +   +         ++++G  P D ++++G+PF G 
Sbjct: 17  AEATTIASLRRQAEGCERCDLYKNATQLVFGEGPVDARVVLVGEQPGDREDLAGRPFVGP 76

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIEL 184
            G +LD+ L    I R++ +++                +   +  E++ C   +  +++ 
Sbjct: 77  AGRILDECLHEAGIDRSECYLTNAVKHFKFEQRGKRRMHSRPNAGEIQACAWWLGAELDE 136

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ----- 239
           + P+I++ +G           +    +N G+             L T+HP  L++     
Sbjct: 137 LRPEIVVALGATALMSLLG-RSVGVTRNRGQLLTAP---GGFSVLVTIHPSYLLRIRGRS 192

Query: 240 YPLIKK-NTWHALITLKKAL 258
            P  ++      L  +   +
Sbjct: 193 DPEAERARFVDDLAKVATRI 212


>gi|150376548|ref|YP_001313144.1| phage SPO1 DNA polymerase-like protein [Sinorhizobium medicae
           WSM419]
 gi|150031095|gb|ABR63211.1| phage SPO1 DNA polymerase-related protein [Sinorhizobium medicae
           WSM419]
          Length = 213

 Score =  141 bits (355), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 75/200 (37%), Gaps = 17/200 (8%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
            +A ++  L+        C L   +   +         ++++G  P D ++++G+PF G 
Sbjct: 17  AEAPTIASLRREAEGCERCDLYKNATQLVFGEGPTDARVVLVGEQPGDREDLAGRPFVGP 76

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIEL 184
            G +LD+ +    I R++ +++                +   +  E++ C   +  +I+ 
Sbjct: 77  AGRLLDECMHEAGIDRSECYLTNAVKHFKFEPRGKRRLHSRPNAGEVQACAWWLGAEIDE 136

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ----- 239
           + P+I++ +G                +N G+             L T+HP  L++     
Sbjct: 137 LRPEIVVALGATALMSLLG-RGVGVTKNRGQ---FVPAPGGFSVLVTIHPSYLLRIRGRG 192

Query: 240 YPLIKK-NTWHALITLKKAL 258
            P  ++      L  +   +
Sbjct: 193 DPEAERARFVDDLAKVAVRI 212


>gi|260463163|ref|ZP_05811365.1| phage SPO1 DNA polymerase-related protein [Mesorhizobium
           opportunistum WSM2075]
 gi|259031013|gb|EEW32287.1| phage SPO1 DNA polymerase-related protein [Mesorhizobium
           opportunistum WSM2075]
          Length = 226

 Score =  141 bits (355), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 86/224 (38%), Gaps = 19/224 (8%)

Query: 52  PITNIRHIHSPLVQQADSIAQK--ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD 109
           P           V +A+ I+ +  A S+ EL+        C L   +  T+     +   
Sbjct: 7   PRNAKMPARRVSVPRAELISDETDANSIPELRDAAEGCRRCPLWRNATQTVFGEGPDNAK 66

Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG------- 162
           ++ +G  P D ++++GKPF G  G + D +L   ++ R +++++                
Sbjct: 67  VIFVGEQPGDQEDLAGKPFVGPAGRVFDAILVDADVDRQKVYVTNAVKHFKFEPRGKRRI 126

Query: 163 NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP 222
           +   +  E++ CR  + ++ +LI P + + +G           A    +  G+       
Sbjct: 127 HSKPNAGEVQACRWWLDQEFDLIKPNLAVALGATAALSLLG-KATPVMKMRGQVIE---R 182

Query: 223 HSIIPTLATVHPQELI--QYPLIK----KNTWHALITLKKALKN 260
              +    T+HP  ++  + P  K    +     +  +K+ +  
Sbjct: 183 EDGLRVFITIHPSFILRIREPADKEAERERFLKDMREVKRLMAA 226


>gi|292492113|ref|YP_003527552.1| phage SPO1 DNA polymerase-related protein [Nitrosococcus halophilus
           Nc4]
 gi|291580708|gb|ADE15165.1| phage SPO1 DNA polymerase-related protein [Nitrosococcus halophilus
           Nc4]
          Length = 194

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 56/193 (29%), Positives = 91/193 (47%), Gaps = 6/193 (3%)

Query: 68  DSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127
           D   +K  +L+ELK L   +    +       +    +   ++MIIG  P   +  +G+P
Sbjct: 6   DEQLEKVATLNELKQLCEHYLGSEVSKGEK-FVFGEGSPQAEVMIIGEAPGVQEAKTGRP 64

Query: 128 FSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP 187
           F G  G +L+ +L  I + R QI+IS I   HP GNR     E++   P ++RQIEL+ P
Sbjct: 65  FVGNAGKLLNTLLNQIGLEREQIYISNILKTHPSGNRKPYRGEIKKELPFLLRQIELLRP 124

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247
           K+L+ +G       ++  A K  +  G W  +      +PT  T HP   ++    KK  
Sbjct: 125 KLLVLLGATALQALYDPKA-KITELRGNWIEV----KNLPTFVTYHPAAALRDETKKKTL 179

Query: 248 WHALITLKKALKN 260
            H    L++ L +
Sbjct: 180 EHDFSKLQERLAS 192


>gi|325293540|ref|YP_004279404.1| DNA polymerase bacteriophage-type [Agrobacterium sp. H13-3]
 gi|325061393|gb|ADY65084.1| putative DNA polymerase bacteriophage-type [Agrobacterium sp.
           H13-3]
          Length = 481

 Score =  141 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 91/231 (39%), Gaps = 14/231 (6%)

Query: 37  YESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTS 96
            E++  E +  +A QP      + +    + +       +L  L         C L   +
Sbjct: 252 AEARVLEMAAKAASQPQPFHHRLQAAASAREEPPPAPDGTLASLAQEAGQCTRCALHCKA 311

Query: 97  LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156
             T+     E   +MI+G  P D ++++GKPF G  G + D+ L    I R +++++   
Sbjct: 312 TQTVFGMGPEDAKVMIVGEQPGDHEDLAGKPFVGPAGQLFDRTLVEAGIDRKKLYVTNAV 371

Query: 157 PWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209
                        ++     E++ CR  + ++IEL+ PK+++ +G            +K 
Sbjct: 372 KHFKYEARGKRRIHQRPDAGEVQQCRWWLNKEIELVRPKLIVAMGATALYALTGGK-EKV 430

Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQYP-LIKKNTWHALITLKKALK 259
            +  G+   +    +      TVHP  L++ P   +K     +   +  + 
Sbjct: 431 SEVRGRPIPMQEERT---LFVTVHPSYLLRLPDSQQKEAE--MQNFRNEID 476


>gi|295695673|ref|YP_003588911.1| phage SPO1 DNA polymerase-related protein [Bacillus tusciae DSM
           2912]
 gi|295411275|gb|ADG05767.1| phage SPO1 DNA polymerase-related protein [Bacillus tusciae DSM
           2912]
          Length = 193

 Score =  141 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 77/182 (42%), Gaps = 5/182 (2%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            +L++L+S  +S   C L       + +  T G  ++++G  P   ++  G PF G+ G 
Sbjct: 5   QNLNQLESAFKSCRRCGLRGGCSQVVVSRGTPG-PVVLVGEAPGADEDAQGFPFVGRAGQ 63

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           +LD+ML+       +++I+      PPGNR  +  EM  CRP +M Q  ++ P+I++ +G
Sbjct: 64  LLDRMLKEAGFDPARLYITNAVKCRPPGNRKPAPEEMVACRPYLMAQFAVLQPEIVVTMG 123

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT---WHAL 251
                           +   ++ +              HP  +++ P    +    W  +
Sbjct: 124 ATAIQAVLGRT-IPVGRASTRFYHARHREREFLVAPCYHPSAILRDPRKYPDAVARWVDI 182

Query: 252 IT 253
             
Sbjct: 183 RK 184


>gi|329114631|ref|ZP_08243390.1| Phage SPO1 DNA Polymerase-Related Protein [Acetobacter pomorum
           DM001]
 gi|326696111|gb|EGE47793.1| Phage SPO1 DNA Polymerase-Related Protein [Acetobacter pomorum
           DM001]
          Length = 420

 Score =  141 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 42/200 (21%), Positives = 74/200 (37%), Gaps = 17/200 (8%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
            +A SL  L +       C L   +  T+     E   LM +G  P D ++++G+PF G 
Sbjct: 220 AQAASLASLSAEAMDCRACSLWQPAKRTVFGEGVENTPLMFVGEQPGDQEDLAGRPFVGP 279

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISP-----WH--PPGNRNLSNIEMEICRPIIMRQIEL 184
            G + DK L+   I+R  I+++         W      ++      +E CR  +  +  L
Sbjct: 280 AGQVFDKALEEAGILRNHIYVTNAVKHFRFTWRNTRRLHQKPDQESVEACRIWLDAERRL 339

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK 244
           + PK+++ +G                +   +   L    S    L TVHP  L++ P  +
Sbjct: 340 VQPKLIVMLGVTAAQSLLK-RPVTISRERSRIFQLNEQCSG---LVTVHPSYLLRLPNEE 395

Query: 245 KNTW------HALITLKKAL 258
                       L      +
Sbjct: 396 AKAREYARFVEDLRLAHSFI 415


>gi|329889045|ref|ZP_08267388.1| uracil-DNA glycosylase, family 4 family protein [Brevundimonas
           diminuta ATCC 11568]
 gi|328844346|gb|EGF93910.1| uracil-DNA glycosylase, family 4 family protein [Brevundimonas
           diminuta ATCC 11568]
          Length = 475

 Score =  141 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 87/235 (37%), Gaps = 17/235 (7%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P   A    + +     SA +P    + + +P V +A +       L EL   ++    C
Sbjct: 239 PELTAAASVRTEAMVTQSAPKPNERFQRVRAPSVDRAPTDDLVPGDLDELARGVQGCRRC 298

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150
            L   +   +C    +   LM++G  P D +++ G+PF+G  G +LD   +   + R  +
Sbjct: 299 PLWRDATQGVCGEGPKRAALMVVGEQPGDQEDLVGRPFTGPAGRLLDAAFEEAGLHRRDL 358

Query: 151 HISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
           +++                +R  S  E++ CR  +  +  L+ P+++L +G         
Sbjct: 359 YLTNAVKHFKHEPRGKRRLHRTPSPSEVQACRWWLDHERRLVKPRLILALGATAGLAVLG 418

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP------LIKKNTWHALI 252
                  +  G+     T         TVHP  L++ P        +      L 
Sbjct: 419 RKPAVQAE-RGRV---ITADDGARVFLTVHPAYLLRLPVPAARDSERAKFLADLR 469


>gi|171910613|ref|ZP_02926083.1| phage SPO1 DNA polymerase-related protein [Verrucomicrobium
           spinosum DSM 4136]
          Length = 476

 Score =  141 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 88/245 (35%), Gaps = 22/245 (8%)

Query: 34  EATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKA-----CSLHELKSLLRSFH 88
                      ++     P   +    S  +Q     A  A       L  L+    +  
Sbjct: 235 WRNLPEAAIIPTLLEQASPRVEVMMERSHALQSQLKEAHPADVPNTNDLEVLRDAAATCK 294

Query: 89  DCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRT 148
            C L   +  T+        +++ +G  P D ++++GKPF G  G +LD+ LQ   I R 
Sbjct: 295 ACPLYKDATQTVFGEGHVSAEIVFLGEQPGDQEDLAGKPFVGPAGRLLDQALQEAGIDRE 354

Query: 149 QIHISMIS---PWHPPG----NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
             +++       W   G    ++     E+  C+P    ++ +I P+IL+ +G       
Sbjct: 355 TCYVTNAVKHFKWKRQGKRRLHQTPVQAEIHACKPWWRAELAIIKPRILVCLGATAARTV 414

Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH------ALITLK 255
               A K     G++           TL TVHP  L++ P  +            L  + 
Sbjct: 415 L-EHAVKIGDVRGEFMETTWCE---KTLVTVHPSSLLRQPDPEIRAEEMARFVADLKLVA 470

Query: 256 KALKN 260
           +AL +
Sbjct: 471 RALAS 475


>gi|330507398|ref|YP_004383826.1| uracil DNA glycosylase [Methanosaeta concilii GP-6]
 gi|328928206|gb|AEB68008.1| uracil DNA glycosylase [Methanosaeta concilii GP-6]
          Length = 192

 Score =  141 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 78/188 (41%), Gaps = 11/188 (5%)

Query: 74  ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
              L  L+  + S   C L  +   T+  +     ++M++G  P   +++ G PF G+ G
Sbjct: 7   PPDLILLQEKIASCDLCPLSLSRNLTVPGSGPSKAEIMLVGEAPGREEDLKGLPFVGRAG 66

Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
            +LD+ L    + R  + I+ +    PP NR  +  E+E+C P +  Q++ I P+I+  +
Sbjct: 67  RLLDEALNEAGLKREDVFITSVIKCRPPQNRKPNKKEIELCLPYLEDQMDAIRPRIICLM 126

Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253
           GN                  G+  +          L T HP  +++   +  +    L  
Sbjct: 127 GNTAIQA--VLGVVGVTVLRGRILSD-------RFLVTYHPAAVLRNRNLMADFVSDLRE 177

Query: 254 LKKALKNL 261
               +++L
Sbjct: 178 --AKIQSL 183


>gi|190572663|ref|YP_001970508.1| putative uracil DNA glycosylase [Stenotrophomonas maltophilia
           K279a]
 gi|190010585|emb|CAQ44194.1| putative uracil DNA glycosylase [Stenotrophomonas maltophilia
           K279a]
          Length = 486

 Score =  141 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 85/218 (38%), Gaps = 17/218 (7%)

Query: 53  ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMI 112
                    P+   A +      SL  L+    +   C L  T+  T+         +M+
Sbjct: 268 PAQAPQRRIPMRGDAAAARPDTASLQTLRQQASACRQCPLWETATQTVFGQGPADARVMV 327

Query: 113 IGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRN 165
           IG  P D++++ G+PF+G  G +LD+ L  + I R  ++++                ++ 
Sbjct: 328 IGEQPGDTEDLRGQPFAGPAGQLLDRALAELGIDRATLYLTNAVKHFHHERRGKVRLHKR 387

Query: 166 LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI 225
             +  ++ CRP +M +I  + P++++ +G       F  D     ++ G+W  L      
Sbjct: 388 PESRHIQACRPWLMGEIARVRPQLIVCLGATAAASVFGRDFNL-SRDRGRWHTLEEGTRG 446

Query: 226 IPTLATVHPQELIQYPLIKK------NTWHALITLKKA 257
               ATVHP  +++     +           L  L + 
Sbjct: 447 Y---ATVHPAWVLRQGDGARRERAYALFRDDLAQLLQK 481


>gi|332703223|ref|ZP_08423311.1| phage SPO1 DNA polymerase-related protein [Desulfovibrio africanus
           str. Walvis Bay]
 gi|332553372|gb|EGJ50416.1| phage SPO1 DNA polymerase-related protein [Desulfovibrio africanus
           str. Walvis Bay]
          Length = 189

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 6/187 (3%)

Query: 74  ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
           +  L EL   +R    C L       +          +++G  P   ++  G+PF G+TG
Sbjct: 7   SARLDELAEGIRICERCPLHLGRRHAVPGEGGFRLHCLLVGEAPGQREDEVGRPFIGRTG 66

Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP-IIMRQIELISPKILLF 192
             LD+ L    + R    I+      PPGNR    +EM+ICR   ++ QI+ + P++++ 
Sbjct: 67  AFLDRFLVPFGLSRDDFFITSSVKCRPPGNRAPKPLEMDICREAWLLPQIQALKPRLVVL 126

Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
           +GN               +  GK       HS +  L T HP   +++P +++       
Sbjct: 127 MGNAPIRSLLGVRT-PMNELHGKLR----QHSGLSMLPTYHPTAAMRFPAVRRLAEADWE 181

Query: 253 TLKKALK 259
           T++  L+
Sbjct: 182 TIRTLLR 188


>gi|94265274|ref|ZP_01289033.1| Phage SPO1 DNA polymerase-related protein [delta proteobacterium
           MLMS-1]
 gi|93454255|gb|EAT04571.1| Phage SPO1 DNA polymerase-related protein [delta proteobacterium
           MLMS-1]
          Length = 276

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/248 (21%), Positives = 96/248 (38%), Gaps = 14/248 (5%)

Query: 19  YADSGVYWVFDEPNNEATYE-------SQRKEKSIDSAIQPITNIRHIHSPLVQQADSIA 71
           + + GV           T         +  ++K   +A       R   +   Q   +  
Sbjct: 33  HQELGVDAYPPSARPLLTATGPGENHRAAAEQKGHQAASATPPPERAEQAGPAQAPAAAR 92

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
           Q    L  +   +R+ + C L       I         L+I+   P  ++  +G P  G+
Sbjct: 93  QPRPELAAVAGRIRACNRCPL--QRPRIIVGQGNPEARLLIVAPPPGPAEEAAGLPCQGE 150

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191
            G +LDKML +I + R+ ++++ +    PP  R  +  E   CRP ++ QI  I P +L 
Sbjct: 151 AGALLDKMLAAIGLARSTVYLTTVVKCDPPDCRPPTPEESRQCRPWLLEQIAAIRPTLLC 210

Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
            +G +       +      Q  G++ +       I  + T+ P  L+  P +KK  WH L
Sbjct: 211 TMGQEAAQSLLKSSRNL-LQLRGRFHD----CQGIALMPTLAPDFLLPNPEMKKAAWHDL 265

Query: 252 ITLKKALK 259
             + K L 
Sbjct: 266 QLIAKRLA 273


>gi|258542770|ref|YP_003188203.1| phage SPO1 DNA polymerase-related protein [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256633848|dbj|BAH99823.1| phage SPO1 DNA polymerase-related protein [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256636907|dbj|BAI02876.1| phage SPO1 DNA polymerase-related protein [Acetobacter pasteurianus
           IFO 3283-03]
 gi|256639960|dbj|BAI05922.1| phage SPO1 DNA polymerase-related protein [Acetobacter pasteurianus
           IFO 3283-07]
 gi|256643016|dbj|BAI08971.1| phage SPO1 DNA polymerase-related protein [Acetobacter pasteurianus
           IFO 3283-22]
 gi|256646071|dbj|BAI12019.1| phage SPO1 DNA polymerase-related protein [Acetobacter pasteurianus
           IFO 3283-26]
 gi|256649124|dbj|BAI15065.1| phage SPO1 DNA polymerase-related protein [Acetobacter pasteurianus
           IFO 3283-32]
 gi|256652111|dbj|BAI18045.1| phage SPO1 DNA polymerase-related protein [Acetobacter pasteurianus
           IFO 3283-01-42C]
 gi|256655168|dbj|BAI21095.1| phage SPO1 DNA polymerase-related protein [Acetobacter pasteurianus
           IFO 3283-12]
          Length = 417

 Score =  140 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 75/200 (37%), Gaps = 17/200 (8%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
            +A SL  L +       C L   +  T+     E   LM +G  P D ++++G+PF G 
Sbjct: 220 AQASSLASLSAEAMDCRACSLWQPANRTVFGEGVENTPLMFVGEQPGDQEDLAGRPFVGP 279

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIEL 184
            G + D+ L+   I+R  ++++                ++      +E CR  +  + +L
Sbjct: 280 AGQVFDRALEEAGILRNHVYVTNAVKHFRFTWKNNRRLHQKPDQESVEACRIWLDAERKL 339

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK 244
           + PK+++ +G                +   +   L    S    L TVHP  L++ P  +
Sbjct: 340 VHPKLIVMLGVTAAQSLLK-RPVTISRERSRIFQLDEQCSG---LVTVHPSYLLRLPNEE 395

Query: 245 KNTW------HALITLKKAL 258
                       L   +  +
Sbjct: 396 AKAREYTRFVEDLRLAQSFI 415


>gi|254521313|ref|ZP_05133368.1| uracil DNA glycosylase superfamily protein [Stenotrophomonas sp.
           SKA14]
 gi|219718904|gb|EED37429.1| uracil DNA glycosylase superfamily protein [Stenotrophomonas sp.
           SKA14]
          Length = 472

 Score =  139 bits (351), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 88/218 (40%), Gaps = 17/218 (7%)

Query: 53  ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMI 112
            +       P+ + + + +    SL  L+    +   C L  T+  T+         +M+
Sbjct: 254 PSQAPQRRIPMREDSATSSTDTRSLQNLRQQASACRQCPLWETATQTVFGQGPADARVMV 313

Query: 113 IGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRN 165
           IG  P D++++ G PF+G  G +LD+ L  + I R  ++++                ++ 
Sbjct: 314 IGEQPGDTEDLRGLPFAGPAGQLLDRALAELGIDRATLYLTNAVKHFHHERRGKIRLHKR 373

Query: 166 LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI 225
             +  ++ CRP +M +I  + P++++ +G       F  D     ++ G+W  L      
Sbjct: 374 PESRHIQACRPWLMGEIARVRPQVIVCLGATAAASVFGRDFNL-SRDRGRWHTLEDGTQS 432

Query: 226 IPTLATVHPQELIQY------PLIKKNTWHALITLKKA 257
               ATVHP  +++           +     L  L++ 
Sbjct: 433 Y---ATVHPAWVLRQGDDVRREAAYRLFRDDLARLQQK 467


>gi|116074927|ref|ZP_01472188.1| phage SPO1 DNA polymerase-related protein [Synechococcus sp.
           RS9916]
 gi|116068149|gb|EAU73902.1| phage SPO1 DNA polymerase-related protein [Synechococcus sp.
           RS9916]
          Length = 201

 Score =  139 bits (350), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 68/183 (37%), Gaps = 11/183 (6%)

Query: 82  SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
                   C L +     + +       +M+IG  P  S++  G PF G++G +LD++L 
Sbjct: 12  EACGGCCRCSLSTQRQQVVVSRGNPNAQVMLIGEAPGASEDAQGLPFVGRSGQLLDQLLV 71

Query: 142 SIEIMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF 200
              +   +   I+ +    PP NR  S  E+  CRP I  QI ++ P +++ +G    + 
Sbjct: 72  QAGLSPDRDLFITNVVKCRPPDNRKPSAKELSACRPWIEEQIAIVDPTVVILVGATAVSA 131

Query: 201 FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK-----NTWHALITLK 255
                        G W            L   HP  L++ P          T   L  ++
Sbjct: 132 MLGLKQAMRS-LRGVWIEQDQRSW----LPIFHPSYLLRNPSRDPGKPVSLTLEDLCQVR 186

Query: 256 KAL 258
             L
Sbjct: 187 DRL 189


>gi|239815784|ref|YP_002944694.1| phage SPO1 DNA polymerase-related protein [Variovorax paradoxus
           S110]
 gi|239802361|gb|ACS19428.1| phage SPO1 DNA polymerase-related protein [Variovorax paradoxus
           S110]
          Length = 237

 Score =  139 bits (349), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 78/190 (41%), Gaps = 11/190 (5%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
           +   +L  L     +  +C L + +  ++      G  LM++G  P D +++ G+PF G 
Sbjct: 6   EATAALKALSVATDACRECPLGAHATQSVFGEGPVGAALMVVGEQPGDKEDLVGRPFVGP 65

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIEL 184
            G + D+ +  +   R +++++                ++     E++ C   +  ++EL
Sbjct: 66  AGKLFDRAVAELGWSREKLYVTNAVKHFKYEPRGKRRMHKTPGQREVDACHHWLESEMEL 125

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ-YPLI 243
           + P+  + +G                +  G+W  +    +    L T+HP  L++  PL 
Sbjct: 126 VQPRACIALGGTAARSLLGRPVAVM-KERGQW--VEDAATGRRVLVTLHPSALLRGDPLQ 182

Query: 244 KKNTWHALIT 253
           ++  W A + 
Sbjct: 183 REAAWEAWLK 192


>gi|329850866|ref|ZP_08265711.1| uracil DNA glycosylase superfamily protein [Asticcacaulis
           biprosthecum C19]
 gi|328841181|gb|EGF90752.1| uracil DNA glycosylase superfamily protein [Asticcacaulis
           biprosthecum C19]
          Length = 278

 Score =  139 bits (349), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 62/277 (22%), Positives = 115/277 (41%), Gaps = 26/277 (9%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVF-DEPNNEATYESQRKEKSIDSAIQPITNIRHI 59
           M     L  ++I +   F  D  +   + + P N    E++       +++  I      
Sbjct: 1   MFPSDDL-AKEIESYLGFLIDHELEESYANAPLNRTLSENKSPNPRAAASVTQIRVTPVA 59

Query: 60  HSPL--------------------VQQADSIAQKACSLHELKSLLRSFHDCHL-CSTSLS 98
            +P                     + +A   A  A SL EL + L +F    L    +  
Sbjct: 60  SAPQGGSLNALKPQNLAGLDTGAVLHEAKQRAGSARSLDELYAELEAFQHMPLRHEGATQ 119

Query: 99  TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158
            +    T   DL+++G  P   ++ SG+ F+GK G ++DK LQ+  ++  +  ++    W
Sbjct: 120 LVKFRGTADPDLIVVGECPDAEEDASGQAFAGKPGALIDKALQAAGVVE-RTLLTPCVFW 178

Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218
            P G R L++ ++ +  P +   I L SPK +L +G    +   N D +   +  G+   
Sbjct: 179 RPAGGRPLTDEDVSLTAPFMHALIRLASPKAILLLGAGAVSVVLNLDQRL-SELRGRVVG 237

Query: 219 LCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
                + +P++A+  P  L++ PL K   W  L+ LK
Sbjct: 238 YHGEPN-VPSMASYPPNFLLRQPLAKGLFWRDLLQLK 273


>gi|282857034|ref|ZP_06266285.1| uracil-DNA glycosylase [Pyramidobacter piscolens W5455]
 gi|282585195|gb|EFB90512.1| uracil-DNA glycosylase [Pyramidobacter piscolens W5455]
          Length = 201

 Score =  138 bits (348), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 45/196 (22%), Positives = 79/196 (40%), Gaps = 14/196 (7%)

Query: 77  LHELKSLLRSFHDCHLCS--------TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128
           L  L   +    +C L          ++   +     E   LMI+G  P   +  +G+PF
Sbjct: 4   LSALHRRVCQCRNCPLGQADGVREDGSAFYHVPGEGPENASLMIVGEAPGAEEERTGRPF 63

Query: 129 SGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188
            G++G +L ++L + E+ R +I I+ I    PP NRN    E+  C P +  Q E I P+
Sbjct: 64  VGRSGRLLTEILAAAELKREEIFITSICKCRPPKNRNPLKTEIAACLPWLTDQFEAIRPR 123

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT- 247
           ++L +GN                  G++         +      HP  L++ P   + + 
Sbjct: 124 LVLAVGNVPSQTLLGVKTGING-LRGRFHQFTWNGRRMTLRPLFHPAYLLRNPRRVEGSP 182

Query: 248 WH----ALITLKKALK 259
           W      L+  ++ L 
Sbjct: 183 WDKMLRDLVEARRFLA 198


>gi|296117296|ref|ZP_06835886.1| phage SPO1 DNA polymerase-related protein [Gluconacetobacter
           hansenii ATCC 23769]
 gi|295976062|gb|EFG82850.1| phage SPO1 DNA polymerase-related protein [Gluconacetobacter
           hansenii ATCC 23769]
          Length = 292

 Score =  138 bits (348), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 60/284 (21%), Positives = 107/284 (37%), Gaps = 35/284 (12%)

Query: 11  QILTIALFYADSGVYWVFDE-PNNE---------------------ATYESQRKEKSIDS 48
             L++   Y + G        P +                       +           S
Sbjct: 3   DSLSLLQLYVEWGADEALSPVPVDRLAQPQAKPPPPIQRARDEEHHFSRSPPSAPAVRPS 62

Query: 49  AIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQ 108
              P  +           A   A +A ++ EL   + +F  C L  T+  T+      G 
Sbjct: 63  RPAPPPSAATTAELAAADARDRAARATTVEELHIAMATFGQCALRDTATHTVTPQGRPGA 122

Query: 109 DLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSN 168
            +M++G  P   ++  G  F G+TG + D+M  SI + R  + ++ +  W PPG R  S 
Sbjct: 123 HVMVVGEAPDADEDRGGMAFCGETGKLTDRMFGSIGLSRDDLFLAPVIAWRPPGGRPPSA 182

Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP------ 222
           +E++ C P + R I L  P+ L+ +GN         +     +  G+W ++  P      
Sbjct: 183 MELKSCLPFLQRLIVLARPRRLILMGNIPV-ALLTGERITAARARGRWRDITVPENLSAT 241

Query: 223 ------HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
                   +IP L   H Q+L   P  +++ W  ++ L+K L+ 
Sbjct: 242 GNNSAVPHVIPALPMRHAQQLRASPTARRDAWKDMLELRKTLQE 285


>gi|294630778|ref|ZP_06709338.1| uracil-DNA glycosylase, family 4 [Streptomyces sp. e14]
 gi|292834111|gb|EFF92460.1| uracil-DNA glycosylase, family 4 [Streptomyces sp. e14]
          Length = 216

 Score =  138 bits (348), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 63/193 (32%), Gaps = 10/193 (5%)

Query: 56  IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115
                      A+        L  L+        C L   +  T+         +M++G 
Sbjct: 2   PTTHAPEDAYTAEPFVPADADLAALREAAAGCRGCPLHRDATQTVFGAGDTTARVMLVGE 61

Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSN------- 168
            P D ++  G+PF G  G +LD+ L    I   + +++                      
Sbjct: 62  QPGDQEDRQGRPFVGPAGKLLDRALAEAGIDPGEAYVTNAVKHFKFTRAEPRKRRIHKAP 121

Query: 169 --IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII 226
              EM  C P +  ++ L+ P++++ +G         +  +   +  G            
Sbjct: 122 TLREMTACGPWLAAELALVEPELIVVLGATAGKALLGSSFRV-TEVRGTVLEHEIHGRPE 180

Query: 227 PTLATVHPQELIQ 239
             + TVHP  +++
Sbjct: 181 RLVPTVHPSSVLR 193


>gi|332187341|ref|ZP_08389079.1| uracil-DNA glycosylase, 4 family protein [Sphingomonas sp. S17]
 gi|332012502|gb|EGI54569.1| uracil-DNA glycosylase, 4 family protein [Sphingomonas sp. S17]
          Length = 465

 Score =  138 bits (347), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 77/250 (30%), Gaps = 19/250 (7%)

Query: 24  VYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQAD--SIAQKACSLHELK 81
           +  +  E   +                        +                  +   L+
Sbjct: 219 IGAMLKEMPRKYWKNMPETALVPQLIAGAQARETGMIDTAKVDVRSGRGGNAQAAWAALR 278

Query: 82  SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
                   C L + +  T+         LM +G  P D ++++G+PF G  G + D+ + 
Sbjct: 279 DEAMGCTRCPLHAPATQTVFGEGPVDASLMFVGEQPGDQEDLAGRPFVGPAGQVFDRAVA 338

Query: 142 SIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
              I R   +++                + + +  E++ CR  + ++  LI PK+ + +G
Sbjct: 339 EAGIDRATAYVTNAVKHFKFEPRGKRRIHSSPNAGEIQACRWWVEQERLLIQPKVTVALG 398

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKK----NTW 248
                  F        +  GK   L    +      TVHP  L++   P  K+       
Sbjct: 399 ATAARSLFG-KVMTIGRERGKALTLPDGGT---AFITVHPSYLLRLPDPAAKEVEYTRFV 454

Query: 249 HALITLKKAL 258
             L     AL
Sbjct: 455 EDLKLAANAL 464


>gi|309790323|ref|ZP_07684890.1| phage SPO1 DNA polymerase-related protein [Oscillochloris
           trichoides DG6]
 gi|308227657|gb|EFO81318.1| phage SPO1 DNA polymerase-related protein [Oscillochloris
           trichoides DG6]
          Length = 210

 Score =  138 bits (347), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 38/189 (20%), Positives = 75/189 (39%), Gaps = 7/189 (3%)

Query: 73  KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
            A ++  +   +R+   C L +     +         +M+IG  P   ++  G+PF G +
Sbjct: 2   SAETIQLIAQEVRTCTLCGLANGRTRAVPGEGPADARIMVIGEGPGFHEDRQGRPFVGPS 61

Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC-RPIIMRQIELISPKILL 191
           G  LD +L    + R  + I+ +    PP NR+    E+ IC    + RQI  I P +++
Sbjct: 62  GKFLDDLLAMAGLSRETVFIANVVKCRPPQNRDPQPDEIAICTEHYLYRQIVAIDPPVIV 121

Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
            +G  + +       ++  +  G+  N+         +  +HP   +  P  +       
Sbjct: 122 TLGRFSMS--LFMPGERIMRVHGQPRNI----DGRLVVPMLHPAAALHQPQNRPLIEADF 175

Query: 252 ITLKKALKN 260
             L + L  
Sbjct: 176 RRLPEILAQ 184


>gi|162450005|ref|YP_001612372.1| putative DNA polymerase related protein [Sorangium cellulosum 'So
           ce 56']
 gi|161160587|emb|CAN91892.1| putative DNA polymerase related protein [Sorangium cellulosum 'So
           ce 56']
          Length = 220

 Score =  138 bits (347), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 79/207 (38%), Gaps = 17/207 (8%)

Query: 65  QQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNIS 124
             A ++     SL  L+        C L      T+        D++++G  P D ++++
Sbjct: 17  ATAAALVPSPPSLPSLREAAARCRACPLWERGTQTVFGEGAARSDVLLVGEQPGDKEDLA 76

Query: 125 GKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPI 177
           GKPF G  G +LD+ L++  I R + +++ +              +      E+  C P 
Sbjct: 77  GKPFVGPAGQLLDRALEAAGIERRRAYVTNVVKHFKWEPRGKRRIHMKPDAREIRACLPW 136

Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237
           +  +I ++ P I++ +G            +   +  G+             LATVHP  +
Sbjct: 137 LAAEIAVVQPAIVVCLGATAAQALLGGSFRV-TRERGRI---VASPLAPRVLATVHPASI 192

Query: 238 IQYPLI--KK----NTWHALITLKKAL 258
           ++ P    ++         L    +AL
Sbjct: 193 LRAPDEATRRAELSRFIEDLTVAARAL 219


>gi|110634843|ref|YP_675051.1| phage SPO1 DNA polymerase-related protein [Mesorhizobium sp. BNC1]
 gi|110285827|gb|ABG63886.1| phage SPO1 DNA polymerase-related protein [Chelativorans sp. BNC1]
          Length = 476

 Score =  138 bits (347), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 82/239 (34%), Gaps = 18/239 (7%)

Query: 32  NNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCH 91
            +       R  +   +A +         +  +    + + +   L  L+  ++S   C 
Sbjct: 239 PDMVRAAGARVAEMETTAPETPPRFAERLAERMASISAQSGELLPLDVLREEIQSCRLCP 298

Query: 92  LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH 151
           L   +   +        ++M +G  P D ++++G+PF G  G + ++ L    I R + +
Sbjct: 299 LHGPATQAVPGEGAPEAEIMFVGEQPGDQEDLAGRPFVGPAGQVFERALLEAGIARQKTY 358

Query: 152 ISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204
           ++                +   S  E+  CR  + R+I  + PK+++ +G          
Sbjct: 359 VTNAVKHFKFEPRGKRRVHMKPSGGEVSKCRFWLDREISAVKPKLVVALGATAMLGLTG- 417

Query: 205 DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK------NTWHALITLKKA 257
                 +  G+             L TVHP  L++ P  ++           L   +  
Sbjct: 418 RPVPVTKARGQV----IAADSFSILVTVHPSYLLRLPEKERAEAEYERFVEDLRKARDW 472


>gi|190895487|ref|YP_001985779.1| DNA-directed DNA polymerase protein [Rhizobium etli CIAT 652]
 gi|190699432|gb|ACE93516.1| probable DNA-directed DNA polymerase protein [Rhizobium etli CIAT
           652]
          Length = 213

 Score =  138 bits (347), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 77/199 (38%), Gaps = 17/199 (8%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
             A S+ EL+        C L   +  T+        +++I+G  P D ++I+G+PF G 
Sbjct: 16  ADADSIDELRHQAEGCTRCDLYRNATQTVFGEGPNKAEIVIVGEQPGDREDITGRPFVGP 75

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIEL 184
            G++LD  L+   + R + +++                +   +  E+  C   +  ++ +
Sbjct: 76  AGHLLDHCLEEAGVDRQRCYVTNAVKHFKFTPRGKRRLHAKPNAGEIRRCAWWLGAELNI 135

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL-- 242
           + PK+++ +G           A+      G       P +  P L T+HP  L++     
Sbjct: 136 LQPKLIVTLGASALYALLGPKAKL-TPERGHILQ---PRNHPPILVTIHPSFLLRIRDEA 191

Query: 243 ----IKKNTWHALITLKKA 257
                ++     L  + + 
Sbjct: 192 EKHRQRQAFVSDLHKVAEF 210


>gi|54024698|ref|YP_118940.1| hypothetical protein nfa27290 [Nocardia farcinica IFM 10152]
 gi|54016206|dbj|BAD57576.1| hypothetical protein [Nocardia farcinica IFM 10152]
          Length = 211

 Score =  138 bits (347), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 75/195 (38%), Gaps = 13/195 (6%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
                L  L++ ++    C L   +   +         + ++G  P D ++++G PF G 
Sbjct: 14  PADADLDTLRTAVQGCRGCELYRGATQAVFGEGPAHAPVFVVGEQPGDREDVAGHPFVGP 73

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIEL 184
            G +LDK L   +I R  ++++                ++     E+  C P +  +++ 
Sbjct: 74  AGRLLDKALTEADIDREAVYLTNAVKHFKFEERGKRRIHKQPGRTEVVACSPWLTAELDA 133

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK 244
           + P++++ +G            +   +  G+             +ATVHP  +++ P  +
Sbjct: 134 VRPQLVVCLGAVAAKAVLGPSFKV-SERRGEVVEA----GEHRVIATVHPSSVLRAPD-R 187

Query: 245 KNTWHALITLKKALK 259
              +   +   + ++
Sbjct: 188 AAAYADFLADLRKVR 202


>gi|89899005|ref|YP_521476.1| phage SPO1 DNA polymerase-like protein [Rhodoferax ferrireducens
           T118]
 gi|89343742|gb|ABD67945.1| phage SPO1 DNA polymerase-related protein [Rhodoferax ferrireducens
           T118]
          Length = 296

 Score =  137 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 93/251 (37%), Gaps = 20/251 (7%)

Query: 29  DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKA---CSLHELKSLLR 85
           + P+N     +     +  +A + +       +        +            L   + 
Sbjct: 43  EAPSNAIENVATNITTTGATAQKILKTSAPPETRGTATGSGVPATDVAGLDWPALTQAIA 102

Query: 86  SFHDCHLCSTSLSTICA--TQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143
           +   C LC    + + A        D +++G  P D+D  +G PF+G  G +LD ML+++
Sbjct: 103 TCQACPLCIGRRTAVQAAPDAPRLADWLLVGEPPDDADEQAGAPFAGAAGQLLDNMLKAL 162

Query: 144 EIMRT--------------QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189
            + R                 +++ I    P   RN +  E+  C   + R++ L+ PK+
Sbjct: 163 GLSRHAGSGVAAPAAQATTAAYVTPIVKCRPAQTRNPTQAELASCENYLRREVALVQPKV 222

Query: 190 LLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW 248
           +L +G          +        LG+       +  IP + +  P  L++ P  K   W
Sbjct: 223 ILALGRFAAQGLLQGSLPGLAGTPLGQLRGQIYRYQGIPVIVSYPPSYLLRSPQHKARAW 282

Query: 249 HALITLKKALK 259
             L   ++AL+
Sbjct: 283 VDLCQAQEALR 293


>gi|329765399|ref|ZP_08256979.1| uracil-DNA glycosylase-like protein [Candidatus Nitrosoarchaeum
           limnia SFB1]
 gi|329138305|gb|EGG42561.1| uracil-DNA glycosylase-like protein [Candidatus Nitrosoarchaeum
           limnia SFB1]
          Length = 197

 Score =  137 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/184 (22%), Positives = 78/184 (42%), Gaps = 6/184 (3%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
             ++  + +   C L  T  +++        D++ +G  P  +++  G+PF G  G  L 
Sbjct: 6   EAIRQKVIACTKCDLSKTRTNSVPGKGNFQSDVIFVGEAPGRNEDKKGEPFVGIAGQRLS 65

Query: 138 KMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197
             L+S  + R  I+I+ +    PP NR  + +E+++C   + ++I +I PKI+  +GN  
Sbjct: 66  AALESAGVSRESIYITNVVKCRPPNNRIPTIMELDMCHDYLQKEIAIIKPKIICILGNTA 125

Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKA 257
            N        +  +  GK             L TVHP   I    +       +I L   
Sbjct: 126 FNSILG--GSEITKYRGKI---VKKDKEFYFL-TVHPAATIYNQELITVLKEDIIKLFDL 179

Query: 258 LKNL 261
           ++ L
Sbjct: 180 IREL 183


>gi|21233093|ref|NP_639010.1| DNA polymerase related protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66770033|ref|YP_244795.1| DNA polymerase related protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|21114947|gb|AAM42934.1| DNA polymerase related protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66575365|gb|AAY50775.1| DNA polymerase related protein [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 425

 Score =  137 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 82/234 (35%), Gaps = 17/234 (7%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P      E  R+       +                A   A  A SL +L+   R    C
Sbjct: 187 PEATLLPELIREAGVRVREMAERAPEPVRRRVPAAPAALPAVAAQSLAQLRVAARDCRRC 246

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150
            L   +  T+     +   +M+IG  P D +++SG+PF G  G + ++ L  + I R + 
Sbjct: 247 DLWQPATQTVFGEGPDDAAVMVIGEQPGDEEDLSGRPFVGPAGRLFNQALGELGIDRQRF 306

Query: 151 HISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
           +++                +RN     ++ C   +  +   + P  ++ +G         
Sbjct: 307 YVTNAVKHFRFEQRGKRRLHRNPERSHVQACNGWLQAERAQLRPAQIVCLGATAAQAVLG 366

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY--PLIK----KNTWHAL 251
               +  Q  G+W  L       P LATVHP  +++   P  +    +     L
Sbjct: 367 P-GFRLMQERGQWQRL---DDGTPVLATVHPSWVLRQGTPSARDAGYRGFVADL 416


>gi|307309406|ref|ZP_07589065.1| phage SPO1 DNA polymerase-related protein [Sinorhizobium meliloti
           BL225C]
 gi|306900136|gb|EFN30755.1| phage SPO1 DNA polymerase-related protein [Sinorhizobium meliloti
           BL225C]
          Length = 213

 Score =  137 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 80/216 (37%), Gaps = 18/216 (8%)

Query: 56  IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115
            +         A   A+ A ++  L+        C L   +   +         ++++G 
Sbjct: 2   PKQPAKLGPALAGEHAE-ATTIASLRRQAERCERCDLYKDATQLVFGEGPVDARVVLVGE 60

Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSN 168
            P D ++++G+PF G  G +LD+ L    I R++ +++                +   + 
Sbjct: 61  QPGDREDLAGRPFVGPAGRILDECLHEAGIDRSECYLTNAVKHFKFEQRGKRRLHSRPNA 120

Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT 228
            E++ C   +  +++ + P+I++ +G           +    +N G    L T       
Sbjct: 121 GEIQACAWWLGAELDELRPEIVVALGATALMSLLG-RSVGVTRNRG---ELLTAPGGFSV 176

Query: 229 LATVHPQELIQ-----YPLIKK-NTWHALITLKKAL 258
           L T+HP  L++      P  ++      L  +   +
Sbjct: 177 LVTIHPSYLLRIRGRSDPEAERARFVGDLAKVAARI 212


>gi|327194181|gb|EGE61045.1| DNA-directed DNA polymerase protein [Rhizobium etli CNPAF512]
          Length = 218

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 73/199 (36%), Gaps = 17/199 (8%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
             A S+ +L+        C L   +   +     +  ++ ++G  P D ++I+G+PF G 
Sbjct: 21  ADAESIADLRRQAEGCTRCDLYRNATQLVFGEGPDKAEVALVGEQPGDREDITGRPFVGP 80

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIEL 184
            G++LD+ L+   + R + +++                +   +  E+  C   +  ++ +
Sbjct: 81  AGHLLDQCLEEAGLDRQRCYVTNAVKHFKFTPRGKRRLHAKPNAGEIRRCAWWLGAELNI 140

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ----- 239
           + PK+++ +G            +      G            P L T+HP  L++     
Sbjct: 141 LQPKLVVALGATALYALLGPKVKL-TPERGHILQPTNRP---PVLVTIHPSYLLRIRDEA 196

Query: 240 -YPLIKKNTWHALITLKKA 257
                ++     L    + 
Sbjct: 197 EQHRQRRQFVSDLHKAAEF 215


>gi|116620515|ref|YP_822671.1| Fis family transcriptional regulator [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116223677|gb|ABJ82386.1| transcriptional regulator, Fis family [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 204

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/206 (20%), Positives = 77/206 (37%), Gaps = 17/206 (8%)

Query: 67  ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126
           A ++     S   L         CHL   +  T+         LM++G  P + ++++G 
Sbjct: 3   ASALIPVKLSWQSLHDAAGGCKACHLWEHATQTVFGEGKSHAPLMLVGEQPGNEEDLAGH 62

Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIM 179
           PF G  G +LD  L++  I R Q +++ +              +   +  E+  C P + 
Sbjct: 63  PFVGPAGRLLDDALEAAGIDRKQAYVTNVVKHFKWEPRGKRRIHAKPTTAEITACIPWLT 122

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
            ++EL+ P+IL+ +G            +   +  GK             +ATVHP  +++
Sbjct: 123 AELELVKPRILICLGATAAQALLGRTFRV-TKQRGKLVESKLAP---YVMATVHPSSILR 178

Query: 240 YPLIKKN------TWHALITLKKALK 259
            P               L +  K L 
Sbjct: 179 APDADARHAEMQSFIADLKSAAKILA 204


>gi|13474291|ref|NP_105859.1| hypothetical protein mll5147 [Mesorhizobium loti MAFF303099]
 gi|14025043|dbj|BAB51645.1| mll5147 [Mesorhizobium loti MAFF303099]
          Length = 223

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 82/224 (36%), Gaps = 17/224 (7%)

Query: 48  SAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEG 107
           +AI P             +         S+ EL+   +    C L   +  T+     + 
Sbjct: 2   TAILPHRTQTSAGRASRARQALDEHFDGSISELREAAKGCRRCPLWRDATQTVFGEGPDN 61

Query: 108 QDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG----- 162
             ++ +G  P D ++++GKPF G  G + D +L   E+ R +++++              
Sbjct: 62  AKVIFVGEQPGDQEDLAGKPFVGPAGKVFDAILDEAEVDRLKVYVTNAVKHFKFEPRGKR 121

Query: 163 --NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220
             +   +  E++ CR  + R+  LI P++ + +G           A    +  G+     
Sbjct: 122 RIHSKPNAGEVQACRWWLDREFALIKPELAVALGATAALSLLG-KAIPVTKMRGQVIE-- 178

Query: 221 TPHSIIPTLATVHPQELIQ------YPLIKKNTWHALITLKKAL 258
                +    T+HP  +++          ++     +  +K+ +
Sbjct: 179 -REDGLRVFITIHPSFILRIHEPVDKEAERERFLRDMREVKRLM 221


>gi|257063504|ref|YP_003143176.1| uracil-DNA glycosylase, family 4 [Slackia heliotrinireducens DSM
           20476]
 gi|256791157|gb|ACV21827.1| uracil-DNA glycosylase, family 4 [Slackia heliotrinireducens DSM
           20476]
          Length = 213

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 5/180 (2%)

Query: 82  SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
             +R+   C+LC    + +      G  +M+IG  P  ++++ GKPF G  GN L ++L 
Sbjct: 28  DAVRACRKCYLCEGRTNAVPGFGNAGARIMLIGEAPGKNEDLQGKPFVGAAGNYLTELLG 87

Query: 142 SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
              + R ++ I+ I    PP NRN    E+  C P +  Q+  I P+ ++ +GN    F 
Sbjct: 88  YAGLTREEVFIANILKCRPPSNRNPQPDEIFECTPYLRDQVRAIMPEYIVTMGNFATKFI 147

Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
              D        G              L   HP   I     ++      + L + L N+
Sbjct: 148 LRTDR-GITGLRGNL----QKTGQFSVLPVFHPAAAIYDRTKREVLEADFVYLGRLLGNV 202


>gi|56552010|ref|YP_162849.1| phage SPO1 DNA polymerase-related protein [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241761912|ref|ZP_04759997.1| phage SPO1 DNA polymerase-related protein [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|56543584|gb|AAV89738.1| phage SPO1 DNA polymerase-related protein [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241373592|gb|EER63164.1| phage SPO1 DNA polymerase-related protein [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 206

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 82/207 (39%), Gaps = 16/207 (7%)

Query: 67  ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126
           +++  +KA S  +L   L     C L   +   +C   +    ++ +G  P D ++++G+
Sbjct: 2   SEAAVKKAPSWEDLTEALHHCTRCALYQKATQVVCGEGSHTSPVIFVGEQPGDQEDLAGR 61

Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIM 179
           PF G  G + D+++ SI   R +I+++                ++  +  E++ CR  + 
Sbjct: 62  PFVGPAGQVFDEVMASIGWPREEIYLTNAVKHFKFWLKGERRIHQTPAPEEVDCCRYWLR 121

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
           ++  L+ P++ + +G                   GK   L    +  P + T HP  +++
Sbjct: 122 QEWRLLKPRLTIALGGTAVLALTGKKQTLGS-LRGKI--LTLGKAAAPFIVTYHPSYILR 178

Query: 240 YPLI--KKNTW----HALITLKKALKN 260
                 ++  +      L   +  L  
Sbjct: 179 QASEEGRQRAYQAMQQDLTIARNFLAA 205


>gi|15889460|ref|NP_355141.1| hypothetical protein Atu2180 [Agrobacterium tumefaciens str. C58]
 gi|15157326|gb|AAK87926.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 481

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 45/210 (21%), Positives = 87/210 (41%), Gaps = 11/210 (5%)

Query: 37  YESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTS 96
            E++  E +  +A QP      + +    +         +L  L    R    C L   +
Sbjct: 252 AEARVLEMAAKAASQPQPFHHRLQAAASAREMPQPVSDGTLQSLAREARQCTRCALHCKA 311

Query: 97  LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156
             T+     E  D+MI+G  P D+++++GKPF G  G + D+ L+ I   R +++++   
Sbjct: 312 TQTVFGEGPEDADIMIVGEQPGDNEDLAGKPFIGPAGQLFDRTLREIGAERKKLYVTNAV 371

Query: 157 PWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209
                        ++  +  E+E CR  + R+I L+ PK+++ +G            +K 
Sbjct: 372 KHFKYETRGKRRIHQRPNAGEVEQCRWWLNREIALVRPKLIVAMGATALYALTGGK-EKV 430

Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
            +  G+   +           TVHP  L++
Sbjct: 431 SEIRGRPLPME---EGRTLFVTVHPSYLLR 457


>gi|114766766|ref|ZP_01445703.1| putative uracil-DNA glycosylase [Pelagibaca bermudensis HTCC2601]
 gi|114541023|gb|EAU44080.1| putative uracil-DNA glycosylase [Roseovarius sp. HTCC2601]
          Length = 316

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 85/223 (38%), Gaps = 12/223 (5%)

Query: 27  VFDEP-NNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLR 85
           + + P   E   E+Q + +++  A   +  IR        +A            L + L 
Sbjct: 69  LPEAPLIPELIAEAQSRAQAMADAAPSLPPIRAERITERLRAPEAPAPVGDREALLTGLA 128

Query: 86  SFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI 145
               C L   +   +         LMI+G  P D ++++G+PF G  G + D + +   +
Sbjct: 129 GCRRCPLWQNATQPVAGEGPLDAALMIVGEQPGDQEDLAGRPFVGPAGQLFDAVAERAGL 188

Query: 146 MRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTK 198
            R + +++                +++ ++ E+  CR  +  + +L+ PK+++ +G    
Sbjct: 189 ARDRAYVTNAVKHFKFAPRGKRRLHQSPNSGEIAHCRWWLDMERQLVRPKLIVAMGASAA 248

Query: 199 NFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241
                 D ++     G            P + T HP  L++ P
Sbjct: 249 ESLTG-DGRRIGTRRGTL---EQAPDGTPVMVTWHPSYLLRLP 287


>gi|74317499|ref|YP_315239.1| putative phage DNA polymerase [Thiobacillus denitrificans ATCC
           25259]
 gi|74056994|gb|AAZ97434.1| putative phage DNA polymerase [Thiobacillus denitrificans ATCC
           25259]
          Length = 235

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 77/205 (37%), Gaps = 11/205 (5%)

Query: 43  EKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICA 102
             +  +A      +          A     K  S+  L+   R    C L   +  T+  
Sbjct: 7   RPARRAAHPEEAQMAEADDETPPTAAPFVPKTRSIDALRRAARGCRGCALYRNATQTVFG 66

Query: 103 TQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH--- 159
                  ++++G  P + +++ G+PF G  G +LD+ L +  I R   +++ +       
Sbjct: 67  EGASHARVLLVGEQPGNDEDLEGRPFVGSAGRVLDEGLAAAGIDRAATYVTNVVKHFKWE 126

Query: 160 ----PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK 215
                  +   +  E++ C P + R+I L+ P +++ +G          D +   +  G+
Sbjct: 127 PSGKRRMHSKPNLREIDACFPWLEREIALLRPHLIVCLGATAAQALLGRDFRV-TRQRGQ 185

Query: 216 WSNLCTPHSIIPTLATVHPQELIQY 240
                        +AT+HP  +++ 
Sbjct: 186 LVASPLAPH---VVATIHPSAILRQ 207


>gi|5932364|gb|AAD56917.1|AF180145_9 hypothetical protein; zm12orf4 [Zymomonas mobilis subsp. mobilis
           ZM4]
          Length = 206

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 83/207 (40%), Gaps = 16/207 (7%)

Query: 67  ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126
           +++  +KA S  +L   L   H C L   +   +C   +    ++ +G  P D ++++G+
Sbjct: 2   SEAAVKKAPSWEDLTEALHHCHSCALYQKATQVVCGEGSHTSPVIFVGEQPGDQEDLAGR 61

Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIM 179
           PF G  G + D+++ SI   R +I+++                ++  +  E++ CR  + 
Sbjct: 62  PFVGPAGQVFDEVMASIGWPREEIYLTNAVKHFKFWLKGERRIHQTPAPEEVDCCRYWLR 121

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
           ++  L+ P++ + +G                   GK   L    +  P + T HP  +++
Sbjct: 122 QEWRLLKPRLTIALGGTAVLALTGKKQTLGS-LRGKI--LTLGKAAAPFIVTYHPSYILR 178

Query: 240 YPLI--KKNTW----HALITLKKALKN 260
                 ++  +      L   +  L  
Sbjct: 179 QASEEGRQRAYQAMQQDLTIARNFLAA 205


>gi|260752452|ref|YP_003225345.1| phage SPO1 DNA polymerase-related protein [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|258551815|gb|ACV74761.1| phage SPO1 DNA polymerase-related protein [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 206

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 82/207 (39%), Gaps = 16/207 (7%)

Query: 67  ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126
           +++  +KA S  +L   L     C L   +   +C   +    ++ +G  P D ++++G+
Sbjct: 2   SEAAVKKAPSWEDLTEALHHCTRCALYQKATQVVCGEGSHTSPVIFVGEQPGDQEDLAGR 61

Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIM 179
           PF G  G + D+++ SI   + +I+++                ++  +  E++ CR  + 
Sbjct: 62  PFVGPAGQVFDEVMASIGWPKEEIYLTNAVKHFKFWLKGERRIHQTPAPEEVDCCRYWLR 121

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
           ++  L+ P++ + +G                   GK   L    +  P + T HP  +++
Sbjct: 122 QEWRLLKPRLTIALGGTAVLALTGKKQTLGS-LRGKI--LTLGKAAAPFIVTYHPSYILR 178

Query: 240 YPLI--KKNTW----HALITLKKALKN 260
                 ++  +      L   +  L  
Sbjct: 179 QASEEGRQRAYQAMQQDLTMARNFLAA 205


>gi|225164210|ref|ZP_03726485.1| phage SPO1 DNA polymerase-related protein [Opitutaceae bacterium
           TAV2]
 gi|224801184|gb|EEG19505.1| phage SPO1 DNA polymerase-related protein [Opitutaceae bacterium
           TAV2]
          Length = 310

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 48/226 (21%), Positives = 80/226 (35%), Gaps = 23/226 (10%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCH-LCSTSLSTICATQTEGQD 109
           +   +      P          KA     LK L+ +   C          +    T    
Sbjct: 75  RSAQSAAASLPPPPVVTLPDGDKATRWACLKDLVTNHPICRANVRPGTLPVLGVGTLDAK 134

Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP-------- 161
           +M +G  P   + + G+PF G  G +L +M+  + + R  ++I  I  W P         
Sbjct: 135 IMFVGEAPGAEEEVRGEPFVGPAGQLLTRMIAGMGLKREDVYIGNIMNWRPQIPTPPGCE 194

Query: 162 --GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN-NDAQKTYQNLGKWSN 218
             GNR  S  EME C P    Q+ +++P IL+ +G           + +   Q  G+W  
Sbjct: 195 QIGNRPPSQAEMEFCLPFFRAQVAIVNPDILVALGKTAAQGMLGLGNVKTLGQVRGRWHT 254

Query: 219 LCTPHSIIPTLATVHPQELIQYPLI-------KKNTWHALITLKKA 257
                   P + T HP  L+            K+  W  L+ + + 
Sbjct: 255 FDGK----PLMVTYHPSYLLHQSDQSARAKQSKRMIWEDLLQVMER 296


>gi|163746768|ref|ZP_02154125.1| uracil-DNA glycosylase, putative [Oceanibulbus indolifex HEL-45]
 gi|161379882|gb|EDQ04294.1| uracil-DNA glycosylase, putative [Oceanibulbus indolifex HEL-45]
          Length = 476

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 72/185 (38%), Gaps = 13/185 (7%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           + EL + +R+   C L   +   +        DLM++G  P D ++++G+PF G  G M 
Sbjct: 282 MEELPAAIRACTRCPLHCHATQAVPGEGPTRADLMVVGEQPGDQEDLAGRPFVGPAGQMF 341

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKI 189
           D++     + R   +++                ++     E++ CR  +  ++  + PK+
Sbjct: 342 DRVASEAGLDREAAYVTNAVKHFKFTARGKRRIHQRPETSEIDQCRWWVNAEVAQVQPKL 401

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKKNT 247
           +L +G                +  G           IP L T+HP  L++   P +++  
Sbjct: 402 ILAMGATAAQSLTG-SGAGILKRRGTI---EAGPEGIPVLITLHPSYLLRVPDPALREEA 457

Query: 248 WHALI 252
                
Sbjct: 458 EAQFR 462


>gi|256371255|ref|YP_003109079.1| phage SPO1 DNA polymerase-related protein [Acidimicrobium
           ferrooxidans DSM 10331]
 gi|256007839|gb|ACU53406.1| phage SPO1 DNA polymerase-related protein [Acidimicrobium
           ferrooxidans DSM 10331]
          Length = 189

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 39/166 (23%), Positives = 73/166 (43%), Gaps = 6/166 (3%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
             L  L++ +R+ H C L +     +         L+++G  P   ++  G+PF G++G 
Sbjct: 4   PELEALEAEVRACHACRLSAGRHQAVPGEGAAPAPLLVVGEGPGAREDELGRPFVGRSGQ 63

Query: 135 MLDKMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
           +LD +L     + R+ ++I+      PPGNR     E+E CR  + RQI L+ P +++ +
Sbjct: 64  LLDALLADETGLDRSGLYIANTVKCRPPGNRTPRPDEVEACRGFLARQIHLVDPVVIVAL 123

Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
           G     +F      +     G+             + T HP   ++
Sbjct: 124 GQSAAAWFLGP-GARVGALRGQVLEWE----GRALVVTYHPSAALR 164


>gi|258541499|ref|YP_003186932.1| bacteriophage-type DNA polymerase [Acetobacter pasteurianus IFO
           3283-01]
 gi|256632577|dbj|BAH98552.1| bacteriophage-type DNA polymerase [Acetobacter pasteurianus IFO
           3283-01]
 gi|256635634|dbj|BAI01603.1| bacteriophage-type DNA polymerase [Acetobacter pasteurianus IFO
           3283-03]
 gi|256638689|dbj|BAI04651.1| bacteriophage-type DNA polymerase [Acetobacter pasteurianus IFO
           3283-07]
 gi|256641743|dbj|BAI07698.1| bacteriophage-type DNA polymerase [Acetobacter pasteurianus IFO
           3283-22]
 gi|256644798|dbj|BAI10746.1| bacteriophage-type DNA polymerase [Acetobacter pasteurianus IFO
           3283-26]
 gi|256647853|dbj|BAI13794.1| bacteriophage-type DNA polymerase [Acetobacter pasteurianus IFO
           3283-32]
 gi|256650906|dbj|BAI16840.1| bacteriophage-type DNA polymerase [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256653897|dbj|BAI19824.1| bacteriophage-type DNA polymerase [Acetobacter pasteurianus IFO
           3283-12]
          Length = 284

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 67/281 (23%), Positives = 107/281 (38%), Gaps = 32/281 (11%)

Query: 9   QEQILTIALFYADSGVY-WVFDEPNNEATYESQ-------------------------RK 42
            E  L++   Y + GV   V D P +     +                          R 
Sbjct: 2   MEAALSLLRLYTEWGVDVAVTDAPVDHRHAGAGLVLPPLRGKTPPQAPPYIPPQPGTGRT 61

Query: 43  EKSIDSAIQPITNIRHIHS--PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI 100
                    P        S    V+QA  +A  A +  EL   + SF  C L   ++ T+
Sbjct: 62  PAPAAVTQNPAQQPPVPTSFADTVEQAQRLAAAANTPEELFEAMDSFTACPLRGAAMHTL 121

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160
             +      LM+IG  P + ++ SG+ F+G  G MLD ML  + + R+Q+ ++   PW P
Sbjct: 122 MPSGPRNAPLMLIGEAPDEDEDRSGQVFAGLCGTMLDTMLAPLPLERSQLALATALPWRP 181

Query: 161 PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220
            G    + ++  ICRP + R I L +P+ LL  G                     W N+ 
Sbjct: 182 AGGTPPTEMDQRICRPFLERAITLFAPQRLLLCGRLPARMLLGKTTDL---PRRNWQNIT 238

Query: 221 TPHS-IIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            P    +P +   HP +L   P  ++  W  L+T+   L+ 
Sbjct: 239 LPGLPPLPVMFMRHPLQLRASPAARREIWTTLMTVMDTLRQ 279


>gi|302389751|ref|YP_003825572.1| phage SPO1 DNA polymerase-related protein [Thermosediminibacter
           oceani DSM 16646]
 gi|302200379|gb|ADL07949.1| phage SPO1 DNA polymerase-related protein [Thermosediminibacter
           oceani DSM 16646]
          Length = 252

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 17/205 (8%)

Query: 68  DSIAQKACSLHELKSLLR----SFHDCHLC--STSLSTICATQTEGQDLMIIGYTPSDSD 121
           D   Q A     LK+ +        +C L         +         LM+IG  P   +
Sbjct: 48  DKGEQSAKMRDFLKNEVLKLLYECGECPLHLAECHTQKVPGDGDWNSPLMLIGEGPGFEE 107

Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ 181
           +  GKPF G+ G +L  +L  + I R +++I+ +    PP NR   + E++ C+ I+  +
Sbjct: 108 DKQGKPFVGRAGQLLTAILNKLNIDRKKVYITNVVKCRPPMNRTPQSKEIKACKRILELE 167

Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241
           +E I+PK+++ +G+   N+F         Q+ G+W            + T HP  +++  
Sbjct: 168 LEFIAPKVIITLGSVPLNYF--KPNSSIMQSRGQW----IYKRGFWIMPTFHPAYILRQG 221

Query: 242 LI-----KKNTWHALITLKKALKNL 261
                  K   W       + ++ L
Sbjct: 222 GETLKRVKWQVWGDFNKAIEKVREL 246


>gi|163739158|ref|ZP_02146570.1| uracil-DNA glycosylase, putative [Phaeobacter gallaeciensis BS107]
 gi|161387558|gb|EDQ11915.1| uracil-DNA glycosylase, putative [Phaeobacter gallaeciensis BS107]
          Length = 481

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 78/235 (33%), Gaps = 16/235 (6%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKA---CSLHELKSLLRSF 87
           P   A  E      +   A+               QA              EL + + S 
Sbjct: 233 PEAAAIPELIATAPARARAMAEAAPTLPPLRAARVQARLPEANPHWQGPAAELPAAINSC 292

Query: 88  HDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR 147
             C L   +   +        DLMI+G  P D +++ G+PF G  G + D++     + R
Sbjct: 293 TRCPLHGPATQAVPGEGPTDADLMIVGEQPGDQEDLVGRPFVGPAGQLFDQLATEAGLPR 352

Query: 148 TQIHISMISPW-------HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF 200
              +++                ++  +  E+  C+  +  +++ + PK +L +G      
Sbjct: 353 EAAYVTNAVKHFKFLPRGRKRLHQQPNGSEIRHCQVWLRAELDQVRPKRILALGATAAEA 412

Query: 201 FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL--IKKNTWHALIT 253
                 +   Q  G            P L T+HP  L++ P   +++     L  
Sbjct: 413 LLG-SGKDILQRRGTI---ERRVDGTPVLITLHPSYLLRVPDRYLRERATEDLRA 463


>gi|108762098|ref|YP_630262.1| uracil-DNA glycosylase [Myxococcus xanthus DK 1622]
 gi|108465978|gb|ABF91163.1| uracil-DNA glycosylase, family 4 [Myxococcus xanthus DK 1622]
          Length = 231

 Score =  136 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 86/223 (38%), Gaps = 21/223 (9%)

Query: 56  IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQT----EGQDLM 111
                  +   A  +  ++ +  +L+        C L  T   T+          G  +M
Sbjct: 3   AMPKRPSVQTTAAPLIPESPTYDKLRKAAAGCQACPLWRTGTQTVFGEPEGQPRPGPRVM 62

Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPGNRNLSN 168
           ++G  P D ++ +G+PF G +G +LD+ L++  I R Q++++       W   G R +  
Sbjct: 63  LVGEQPGDQEDRAGRPFVGPSGRLLDEALEAAGIDRAQVYVTNTVKHFKWTGQGPRRIHA 122

Query: 169 I----EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS 224
                E+  C P +  +I +  P +L+ +G           A +  Q+ G+         
Sbjct: 123 KPTTTEIRACLPWLEAEIRVFRPDVLVCLGATAAQALLG-KAFRVTQSRGQPMASEWARV 181

Query: 225 IIPTLATVHPQELIQYPLIKKN------TWHALITLKKALKNL 261
               +ATVHP  +++ P  +            L  + + +  L
Sbjct: 182 ---VVATVHPSSILRAPDPRAKEAALEAFVDDLRQVARIIHGL 221


>gi|209546253|ref|YP_002278143.1| phage SPO1 DNA polymerase-related protein [Rhizobium leguminosarum
           bv. trifolii WSM2304]
 gi|209539110|gb|ACI59043.1| phage SPO1 DNA polymerase-related protein [Rhizobium leguminosarum
           bv. trifolii WSM2304]
          Length = 213

 Score =  136 bits (342), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 82/212 (38%), Gaps = 18/212 (8%)

Query: 59  IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPS 118
           + S     A  +A+ A S+ EL+        C L   +   +        +++++G  P 
Sbjct: 4   VASAGPALALDVAE-AESIAELRHQAEGCTRCDLYRNATQIVFGEGPGKAEIVLVGEQPG 62

Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEM 171
           D ++++G+PF G  G +LD+ L+   + R + +++                +   +  E+
Sbjct: 63  DQEDLAGRPFVGPAGRLLDRCLEEAGLDRRRCYVTNAVKHFKFTQRGKRRLHAKPNAGEI 122

Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231
           + C   +  +I ++ PK+++ +G            +      G       P +  P L T
Sbjct: 123 KRCAWWLGAEINILKPKLVVTLGASALYALLGPKVKL-TPERGHILQ---PANHPPVLVT 178

Query: 232 VHPQELIQ------YPLIKKNTWHALITLKKA 257
           +HP  L++         ++++    L      
Sbjct: 179 IHPSYLLRIRDEAEQQRLRQDFVSDLHKAAAF 210


>gi|57234761|ref|YP_181181.1| uracil-DNA glycosylase, putative [Dehalococcoides ethenogenes 195]
 gi|57225209|gb|AAW40266.1| uracil-DNA glycosylase, putative [Dehalococcoides ethenogenes 195]
          Length = 189

 Score =  136 bits (342), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 6/171 (3%)

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150
           +L +T    +         +M IG  P  +++  G+PF G  G  L +++ SI + R  +
Sbjct: 5   NLHTTRTHAVPGEGNADAKIMFIGEAPGFNEDQQGRPFVGAAGKFLTELIHSIGLRREDV 64

Query: 151 HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210
           +I+ +    PPGNR+    E+  CR  + RQIE+I PKI++ +G  +   +F        
Sbjct: 65  YITNVVKDRPPGNRDPLPDEISACRNFLDRQIEIIKPKIIVTLGRYSMARYFTGSTIS-- 122

Query: 211 QNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
               +          +      HP   +    ++K     ++ +   L+ L
Sbjct: 123 ----RIHGKPMRRDGVIYYPMYHPAAALHQGGLRKEIEQDMLRIPGLLEEL 169


>gi|33863050|ref|NP_894610.1| Uracil-DNA glycosylase [Prochlorococcus marinus str. MIT 9313]
 gi|33634967|emb|CAE20953.1| Uracil-DNA glycosylase [Prochlorococcus marinus str. MIT 9313]
          Length = 207

 Score =  136 bits (342), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 76/180 (42%), Gaps = 11/180 (6%)

Query: 85  RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIE 144
                C L       + +       LM+IG  P   ++  GKPF G++G ++D++++S+ 
Sbjct: 13  NGCGSCDLPVNQPQVVVSRGNPHASLMLIGEAPGAREDELGKPFVGRSGQLIDRLMESVG 72

Query: 145 IMRTQI-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
           +      +I  +    PP NR  + +E+  CRP + +QIEL+ P ++   G+        
Sbjct: 73  LDPQTDAYICNVVKCRPPKNRRPTLVEIASCRPWLQQQIELVDPCVIALAGSTAVEAILG 132

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL-----IKKNTWHALITLKKAL 258
                  +  G+W +          +  +HP  L++ P          T   L+ +++ L
Sbjct: 133 IKG-GITRLRGQWQHWQ----GRLLMPLLHPAYLLRNPSPVDGAPVALTRGDLLEVRQRL 187


>gi|254776520|ref|ZP_05218036.1| hypothetical protein MaviaA2_17874 [Mycobacterium avium subsp.
           avium ATCC 25291]
          Length = 221

 Score =  136 bits (342), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 83/220 (37%), Gaps = 21/220 (9%)

Query: 59  IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPS 118
             +     AD    +   +  LK    +   C L + +  T+      G  +M++G  P 
Sbjct: 2   TATSKAPGADRYLPEQRDIEALKHAAETCRGCSLFADATQTVFGNGHPGAPIMLVGEQPG 61

Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG--------NRNLSNIE 170
           D ++ +G PF G  G +L + LQ   I     + +                 ++     E
Sbjct: 62  DQEDRAGAPFVGPAGRLLARALQDAGIDPGLTYQTNAVKHFKFTRKDGKRRIHQKPGRTE 121

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP--- 227
           +  CRP ++ +IE + P+I++ +G            + + Q  G+   L     +IP   
Sbjct: 122 IVACRPWLITEIEAVHPRIIVCLGATAAQSLLGTSFRVSTQ-RGQPLKLPASPEVIPDVS 180

Query: 228 ----TLATVHPQELIQYPLIK-----KNTWHALITLKKAL 258
                +ATVHP  +++    +     +     L + + AL
Sbjct: 181 PEPVLVATVHPSSVLRDRSERHDEVYRLFVDDLRSARSAL 220


>gi|21233304|ref|NP_639221.1| DNA polymerase-related protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66770264|ref|YP_245026.1| DNA polymerase-related protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|188993464|ref|YP_001905474.1| putative phage-related protein [Xanthomonas campestris pv.
           campestris str. B100]
 gi|21115573|gb|AAM43495.1| DNA polymerase-related protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66575596|gb|AAY51006.1| DNA polymerase-related protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167735224|emb|CAP53436.1| putative phage-related protein [Xanthomonas campestris pv.
           campestris]
          Length = 219

 Score =  136 bits (341), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 82/218 (37%), Gaps = 18/218 (8%)

Query: 56  IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115
                +PL +  D++   + +L  L++  +    C L   +   +         LMIIG 
Sbjct: 7   PSAPTTPLAKPVDTV--PSGTLTALRAQAQDCRRCDLWKPATQVVFGAGPARAPLMIIGE 64

Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSN 168
            P D ++  G+PF G  G +L  ++    +     +++                ++  + 
Sbjct: 65  QPGDQEDQQGRPFVGPAGQLLGTLMADAGLDPAMAYVTNTVKHFKFVPRGKRRLHQRATA 124

Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT 228
            E   CRP +  ++  + P+I+L +G       F  +A +     G+W  L         
Sbjct: 125 GEQAACRPWLAAELLRVRPRIVLALGAMAAQTLFG-NAFRLTTERGQWRALDGR---TTA 180

Query: 229 LATVHPQELIQ-----YPLIKKNTWHALITLKKALKNL 261
           LA+ HP  +++         +      L  +  AL NL
Sbjct: 181 LASWHPSAILRMREPDRTATRALLREDLAQVAAALDNL 218


>gi|41409354|ref|NP_962190.1| hypothetical protein MAP3256c [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41398174|gb|AAS05804.1| hypothetical protein MAP_3256c [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 221

 Score =  136 bits (341), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 82/220 (37%), Gaps = 21/220 (9%)

Query: 59  IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPS 118
             +     AD    +   +  LK    +   C L + +  T+      G  +M++G  P 
Sbjct: 2   TATSKAPGADRYLPEQRDIEALKHAAETCRGCSLFADATQTVFGNGHPGAPIMLVGEQPG 61

Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG--------NRNLSNIE 170
           D ++ +G PF G  G +L + L    I     + +                 ++     E
Sbjct: 62  DQEDRAGAPFVGPAGRLLARALHDAGIDPGLTYQTNAVKHFKFTRKDGKRRIHQKPGRTE 121

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP--- 227
           +  CRP ++ +IE + P++++ +G            + + Q  G+   L     +IP   
Sbjct: 122 IVACRPWLIAEIEAVHPRVIVCLGATAAQSLLGTSFRVSTQ-RGQPLKLPASPEVIPDVA 180

Query: 228 ----TLATVHPQELIQYPLIK-----KNTWHALITLKKAL 258
                +ATVHP  +++    +     +     L + + AL
Sbjct: 181 PEPVLVATVHPSSVLRDRSERHDEVYRLFVDDLRSARSAL 220


>gi|218679206|ref|ZP_03527103.1| phage SPO1 DNA polymerase-related protein [Rhizobium etli CIAT 894]
          Length = 209

 Score =  136 bits (341), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 75/198 (37%), Gaps = 17/198 (8%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
             A S+  L+        C L   +   +        +++++G  P D +++SGKPF G 
Sbjct: 16  ADATSIAGLRHQAEGCTRCDLYRNATQIVFGEGAGQAEIVLVGEQPGDREDLSGKPFVGP 75

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIEL 184
            G +LD+ L+   + R + +++                +   +  E+  C   +  ++ +
Sbjct: 76  AGRLLDQCLEEAGLDRERCYVTNAVKHFKFTSRGKRRLHAKPNAGEIRRCAWWLGAELNI 135

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ----- 239
           I PK+++ +G            + T +          P    P L T+HP  L++     
Sbjct: 136 IKPKLVVTLGASALYALLGPKVKLTPERGHILHPANRP----PVLVTIHPSYLLRIRDEA 191

Query: 240 -YPLIKKNTWHALITLKK 256
               ++++    L    +
Sbjct: 192 EQRRLRRDFVSDLHMAAE 209


>gi|329115091|ref|ZP_08243846.1| Phage SPO1 DNA Polymerase-Related Protein [Acetobacter pomorum
           DM001]
 gi|326695534|gb|EGE47220.1| Phage SPO1 DNA Polymerase-Related Protein [Acetobacter pomorum
           DM001]
          Length = 284

 Score =  136 bits (341), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 61/281 (21%), Positives = 102/281 (36%), Gaps = 32/281 (11%)

Query: 9   QEQILTIALFYADSGVYWVFDE---------------PNNEATYESQRKEKSIDSAIQPI 53
            E  L++   Y + GV     +               P    T +               
Sbjct: 2   MEAALSLLRLYTEWGVDVAVTDAAVDHRHAGAGLVLPPLRGKTPQQAPPYTPPQLGTGRT 61

Query: 54  TNIRHIH-------------SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI 100
                               +  V+QA  +A  A +  EL   + SF  C L   ++ T+
Sbjct: 62  PAPATTAQRPPQQQPGPTSFADTVEQAQRLAAAATTPEELFQAMDSFMACPLRGAAMHTL 121

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160
                    LM+IG  P + ++ SG+ F+G  G +LD ML  + + R+Q+ ++   PW P
Sbjct: 122 MPAGPHHAPLMLIGEAPDEDEDRSGQVFAGLCGTLLDTMLAPLPLERSQLALATALPWRP 181

Query: 161 PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220
            G    + ++  ICRP + R I L +P+ LL  G                     W  + 
Sbjct: 182 AGGTAPTEMDQRICRPFLERAITLFAPQRLLLCGRLPARMLLGKTTDL---PRRNWQEIT 238

Query: 221 TPHSI-IPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            P    +P +   HP +L   P  ++  W  L+T+   L+ 
Sbjct: 239 LPGLPALPVMVMRHPLQLRASPAARREIWATLMTVMDTLRQ 279


>gi|323135754|ref|ZP_08070837.1| Uracil-DNA glycosylase superfamily [Methylocystis sp. ATCC 49242]
 gi|322398845|gb|EFY01364.1| Uracil-DNA glycosylase superfamily [Methylocystis sp. ATCC 49242]
          Length = 281

 Score =  135 bits (340), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 52/274 (18%), Positives = 96/274 (35%), Gaps = 22/274 (8%)

Query: 8   SQEQILTIALFYADSGVYWVFD-EPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQ 66
           ++E +L +  +Y +SG  +  D  P++     ++      +         R      +  
Sbjct: 9   TREALLALLDWYVESGADFALDDSPHDRYADSARAPTAVSEPPPPSRAVERGEPRAPLTP 68

Query: 67  ADSIAQK--------------------ACSLHELKSLLRSFHDCHLCSTSLSTICATQTE 106
           A   A+                     A  L +L + L  F        +   +      
Sbjct: 69  APRRARPETLIAPPDEAARAAEATAAAARDLDDLAARLADFPHAPFRDMARHFLFGAGAP 128

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL 166
           G  LM     P  ++   G  FSG+   +LD ML +I + R    ++ +SPW PPG++ L
Sbjct: 129 GARLMAFDAAPGATEESGGAAFSGERAKLLDNMLAAIGLDRGSARLAYVSPWRPPGDKAL 188

Query: 167 SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII 226
           +  EM +  P   R +EL  P++LL  G            +   +  GK  ++       
Sbjct: 189 TPQEMAVFAPFARRHVELARPEVLLLFGEAPARIML-ETGEPLAKLRGKCFDVRCGDHAA 247

Query: 227 PTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
                     +++   +K   W  L      L++
Sbjct: 248 RAFVFSSLDAMLKSAGLKPAAWRDLRAAAALLRS 281


>gi|209967194|ref|YP_002300109.1| Uracil DNA glycosylase superfamily [Rhodospirillum centenum SW]
 gi|209960660|gb|ACJ01297.1| Uracil DNA glycosylase superfamily [Rhodospirillum centenum SW]
          Length = 230

 Score =  135 bits (340), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 79/214 (36%), Gaps = 17/214 (7%)

Query: 59  IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPS 118
                   A      A ++  L+        C L  T   T+     E   L+++G  P 
Sbjct: 2   PPRAPPDTAARFLPPARTIPALREAAAGCTACPLHETGTRTVFGEGPERARLVLVGEQPG 61

Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPGNRNLSNI----EM 171
           D ++  G+PF G  G ++D  L +  I RT I+++       W   G+R L       E+
Sbjct: 62  DREDAQGRPFVGPAGQLMDLALNAAGIDRTGIYVTNAVKHFKWVQRGHRRLHEKPGRLEI 121

Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231
             C P +  +I  I+P+ ++ +G            +   +  G++        I    AT
Sbjct: 122 LACLPWLENEIAAIAPEGIVCLGATAAQALIGRTFKV-TEERGQFLRTPLAGWIT---AT 177

Query: 232 VHPQELIQ--YPLIKKNTWH----ALITLKKALK 259
           VHP  L++      ++  +      L  +   L 
Sbjct: 178 VHPSSLLRIEDRETQRAAYERFVDDLARIADRLA 211


>gi|332557671|ref|ZP_08411993.1| phage SPO1 DNA polymerase-related protein [Rhodobacter sphaeroides
           WS8N]
 gi|332275383|gb|EGJ20698.1| phage SPO1 DNA polymerase-related protein [Rhodobacter sphaeroides
           WS8N]
          Length = 485

 Score =  135 bits (340), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 84/241 (34%), Gaps = 17/241 (7%)

Query: 34  EATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLC 93
           E   E Q    +   A       +   +     A S      SL E K+       C L 
Sbjct: 248 ERAAEMQAAAPTEPPARTAAVARQRAAAAGGPPAASDGSAPGSLAEAKTAAEGCRRCGLW 307

Query: 94  STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHIS 153
           + +   +         +MI+G  P D ++++G+PF G  G + D+   +  + R  ++++
Sbjct: 308 ANATQVVFGEGPATARMMIVGEQPGDREDLAGRPFVGPAGQLFDEEAAAAGLDRGSVYVT 367

Query: 154 MISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206
                           ++     E+  CR  +  + +L+ P++++ +G            
Sbjct: 368 NAVKHFKFTPRGKRRIHQKPDAGEVTACRWWLDLERDLVRPRLIVAMGATALASLTG-SG 426

Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL------IKKNTWHALITLKKALKN 260
               +  G    L       P   TVHP  +++ P        ++     L   ++ L+ 
Sbjct: 427 AGILKRRGSVERL---DDGTPLFVTVHPSYILRLPDEAARAEERRRFRADLEEARQLLER 483

Query: 261 L 261
           L
Sbjct: 484 L 484


>gi|118575792|ref|YP_875535.1| uracil-DNA glycosylase [Cenarchaeum symbiosum A]
 gi|118194313|gb|ABK77231.1| uracil-DNA glycosylase [Cenarchaeum symbiosum A]
          Length = 216

 Score =  135 bits (340), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 71/182 (39%), Gaps = 6/182 (3%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L  + + +     C LC    + +  T       +++G  P   +++ GKPF G  G +L
Sbjct: 38  LGGIAARVSVCTRCGLCEGRTNAVPGTGPASARAILVGEAPGREEDLQGKPFVGGAGRVL 97

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           DK L+   I R+ ++I+ +    PP NR  S+ E + C   +  +I +I+P+I+  +G  
Sbjct: 98  DKELERAGIPRSTVYITNVVKCRPPKNRVPSDEERDACIEYLKEEISVINPRIVCILGAT 157

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                            G   N          L ++HP   +    +       +  L  
Sbjct: 158 ALRSLLGLGG--ITGIRGTIINQDNTDY----LVSLHPAATMYRRDLLPAFRRDMKKLAG 211

Query: 257 AL 258
            +
Sbjct: 212 MI 213


>gi|171913025|ref|ZP_02928495.1| phage SPO1 DNA polymerase-related protein [Verrucomicrobium
           spinosum DSM 4136]
          Length = 315

 Score =  135 bits (340), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 45/233 (19%), Positives = 91/233 (39%), Gaps = 37/233 (15%)

Query: 40  QRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLST 99
           +R   S  S + P    R      +        KA SL  L+ ++               
Sbjct: 85  ERISLSAPSPLTPQAQTRDEMLAHLALEAENNDKARSLGTLRDIM--------------- 129

Query: 100 ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH 159
           + AT T   +++ +G  P   +    +PF G  G +L K++Q++ + R  ++I+ I  + 
Sbjct: 130 VFATGTPDAEIVFVGEAPGAEEEKMREPFVGPAGQLLTKIIQAMGLRRNDVYITNICKFR 189

Query: 160 PP---------GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210
           P           NR  S  EM  C+  ++ ++E+I PK+++ +G+               
Sbjct: 190 PKIDDGRFQGAKNRAPSVGEMLSCQQFVLAELEIIKPKVIVALGSTAATGL--GIEGTVG 247

Query: 211 QNLGKWSNLCTPHSIIPTLATVHPQELIQYP-------LIKKNTWHALITLKK 256
           +  G++ +        P + T HP  L++           K+  W  ++ + +
Sbjct: 248 RLRGQFHDF----RGTPIMVTYHPSYLLRREQEDGGGIAEKRLVWEDMMKVMQ 296


>gi|116255511|ref|YP_771344.1| putative uracil-DNA glycosylase [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115260159|emb|CAK03262.1| putative uracil-DNA glycosylase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 213

 Score =  135 bits (340), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 75/199 (37%), Gaps = 17/199 (8%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
             A S+ EL+        C L   +   +        +++++G  P D ++++G+PF G 
Sbjct: 16  ADADSIAELRHQAEGCTRCDLFRNATQVVFGEGLVKSEIVLVGEQPGDQEDLTGRPFVGP 75

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIEL 184
            G +LD+ L+   + R + +++                +   +  E+  C   +  ++ +
Sbjct: 76  AGRLLDRCLEEAGLDRQRCYVTNAVKHFKFTPRGKRRLHAKPNAGEIRRCAWWLGAELNI 135

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ----- 239
           + PK+++ +G          +A+ T +          P    P L T+HP  L++     
Sbjct: 136 LQPKLVVALGASALYALLGPNAKLTPERGHILHPTNRP----PVLVTIHPSYLLRIRDEQ 191

Query: 240 -YPLIKKNTWHALITLKKA 257
                ++     L      
Sbjct: 192 EQHRQRREFVSDLHKAAAF 210


>gi|163846564|ref|YP_001634608.1| phage SPO1 DNA polymerase-like protein [Chloroflexus aurantiacus
           J-10-fl]
 gi|222524355|ref|YP_002568826.1| phage SPO1 DNA polymerase-related protein [Chloroflexus sp.
           Y-400-fl]
 gi|163667853|gb|ABY34219.1| phage SPO1 DNA polymerase-related protein [Chloroflexus aurantiacus
           J-10-fl]
 gi|222448234|gb|ACM52500.1| phage SPO1 DNA polymerase-related protein [Chloroflexus sp.
           Y-400-fl]
          Length = 210

 Score =  135 bits (339), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 72/186 (38%), Gaps = 7/186 (3%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           +L  +   ++    C+L       +         +M+IG  P   ++  G+PF G +G  
Sbjct: 6   TLFAIAQEVQHCTACNLHKGRTRAVPGEGPANARIMLIGEGPGYHEDRQGRPFVGPSGQF 65

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP-IIMRQIELISPKILLFIG 194
           L  +L    + R +++I+ +    PP NR+    E+  C    +MRQI  I P +++ +G
Sbjct: 66  LTDLLALAGLRRDEVYIANVVKCRPPQNRDPEPEEIATCTKLFLMRQIAAIDPAVIVTLG 125

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
             +   F     ++  +  G+   +         +  +HP   +  P  +         L
Sbjct: 126 RFSMGLFL--PGERISRIHGQPRYVQ----GRLIVPMIHPAAALHQPQNRPLLEADFRRL 179

Query: 255 KKALKN 260
              L  
Sbjct: 180 PDILAE 185


>gi|315636217|ref|ZP_07891471.1| uracil-DNA glycosylase [Arcobacter butzleri JV22]
 gi|315479578|gb|EFU70257.1| uracil-DNA glycosylase [Arcobacter butzleri JV22]
          Length = 222

 Score =  135 bits (339), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 43/189 (22%), Positives = 89/189 (47%), Gaps = 8/189 (4%)

Query: 74  ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
              + ELK+ +   + C LC    + +         +M I   P+ S++  G  + G +G
Sbjct: 40  PNDIKELKNSVEHCYLCELCKVRKNVLFGYGNINSKIMFICDEPTKSEDELGSFYVGNSG 99

Query: 134 NMLDKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192
            +L KM++++  I +  ++I+ +           S+   + C   +++QIELI PK+++ 
Sbjct: 100 ELLSKMIENVLNIKKEDVYITTLVKCKSLNGATNSS--FDTCNDYLLKQIELIKPKLIVS 157

Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
           +G KT   +   +    +Q  GK  N       I  +A   P  L++ P +KK+ ++ ++
Sbjct: 158 LGEKT-YSYLMKNGDNFFQIRGKMLNFN----SIALMAVYSPTFLLRNPSLKKDAYYDML 212

Query: 253 TLKKALKNL 261
            +K  ++ L
Sbjct: 213 KIKSFMEEL 221


>gi|241666692|ref|YP_002984776.1| phage SPO1 DNA polymerase-related protein [Rhizobium leguminosarum
           bv. trifolii WSM1325]
 gi|240862149|gb|ACS59814.1| phage SPO1 DNA polymerase-related protein [Rhizobium leguminosarum
           bv. trifolii WSM1325]
          Length = 213

 Score =  135 bits (339), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 76/199 (38%), Gaps = 17/199 (8%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
             A S+ EL         C L   +   +    +   ++++IG  P D ++++G+PF G 
Sbjct: 16  ANADSIAELWHQAEDCTRCDLYRNATQIVFGEGSGKAEIVLIGEQPGDQEDLTGRPFVGP 75

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIEL 184
            G +LD+ L+   + R + +++                +   +  E+  C   +  ++ +
Sbjct: 76  AGRLLDRCLEEAGLDRQRCYVTNAVKHFKFTPRGKRRLHAKPNAGEIRRCAWWLGAELNI 135

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ----- 239
           + PK+++ +G           A+ T +          P    P L T+HP  L++     
Sbjct: 136 LQPKLVVTLGASALYALLGPKAKLTPERGHILHPTNHP----PVLVTIHPSYLLRIRNEA 191

Query: 240 -YPLIKKNTWHALITLKKA 257
                +++    L    + 
Sbjct: 192 DRDQQRRDFVSDLHKAAEF 210


>gi|163742352|ref|ZP_02149739.1| Uracil-DNA glycosylase superfamily protein [Phaeobacter
           gallaeciensis 2.10]
 gi|161384302|gb|EDQ08684.1| Uracil-DNA glycosylase superfamily protein [Phaeobacter
           gallaeciensis 2.10]
          Length = 481

 Score =  135 bits (339), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 79/235 (33%), Gaps = 16/235 (6%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKA---CSLHELKSLLRSF 87
           P   A  E      +   A+               QA              EL + + S 
Sbjct: 233 PEAAAIPELIATAPARARAMAEAAPTLPPLRAARVQARLPEANPHWQGPAAELPAAINSC 292

Query: 88  HDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR 147
             C L   +   +        DLMI+G  P D +++ G+PF G  G + D++     + R
Sbjct: 293 TLCPLYGPATQAVPGEGPTDADLMIVGEQPGDQEDLVGRPFVGPAGQLFDQLATEAGLPR 352

Query: 148 TQIHISMISPW-------HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF 200
              +++                ++  +  E+  C+  +  +++ + PK++L +G      
Sbjct: 353 EAAYVTNAVKHFKFLPRGRKRLHQQPNGSEIRHCQVWLRAELDQVRPKLILALGATAAEA 412

Query: 201 FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL--IKKNTWHALIT 253
                 +   Q  G            P L T+HP  L++ P   +++     L  
Sbjct: 413 LLG-SGKHILQRRGTI---ERRVDGTPVLITLHPSYLLRVPDRYLRERATEDLRA 463


>gi|161528564|ref|YP_001582390.1| phage SPO1 DNA polymerase-related protein [Nitrosopumilus maritimus
           SCM1]
 gi|160339865|gb|ABX12952.1| phage SPO1 DNA polymerase-related protein [Nitrosopumilus maritimus
           SCM1]
          Length = 196

 Score =  135 bits (339), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 72/187 (38%), Gaps = 6/187 (3%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
             L  +K  +     C L  T  +++        D++ +G  P  +++ +G+PF G  G 
Sbjct: 2   NQLETIKQNVIKCTKCDLYKTRTNSVPGKGNFQSDVIFVGEAPGRNEDKNGEPFVGAAGK 61

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
            L   L+   + R  ++I+ +    PP NR  +  E + C+  +  +I +I PKI+  +G
Sbjct: 62  KLSAALEGAGVSREDVYITNVVKCRPPNNRVPNTNERDTCKEYLKNEILIIKPKIICVLG 121

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
           N   N        +  +  GK               T+HP   I    +       +  L
Sbjct: 122 NTAFNSVLG--GSEITKFRGKL----VRKDNQLYFLTIHPAATIYNQELISTLNEDIKKL 175

Query: 255 KKALKNL 261
              +  L
Sbjct: 176 FNLITEL 182


>gi|118463844|ref|YP_883243.1| uracil DNA glycosylase superfamily protein [Mycobacterium avium
           104]
 gi|118165131|gb|ABK66028.1| uracil DNA glycosylase superfamily protein [Mycobacterium avium
           104]
          Length = 221

 Score =  135 bits (339), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 82/220 (37%), Gaps = 21/220 (9%)

Query: 59  IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPS 118
             +     AD    +   +  LK    +   C L + +  T+      G  +M++G  P 
Sbjct: 2   TATSKAPGADRYLPEQRDIEALKHAAETCRGCSLFADATQTVFGNGHPGAPIMLVGEQPG 61

Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG--------NRNLSNIE 170
           D ++ +G PF G  G +L + L    I     + +                 ++     E
Sbjct: 62  DQEDRAGAPFVGPAGRLLARALHDAGIDPGLTYQTNAVKHFKFTRKDGKRRIHQKPGRTE 121

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP--- 227
           +  CRP ++ +IE + P++++ +G            + + Q  G+   L     +IP   
Sbjct: 122 IVACRPWLIAEIEAVHPRVIVCLGATAAQSLLGTSFRVSAQ-RGQPLKLPASPEVIPDVA 180

Query: 228 ----TLATVHPQELIQYPLIK-----KNTWHALITLKKAL 258
                +ATVHP  +++    +     +     L + + AL
Sbjct: 181 PEPVLVATVHPSSVLRDRSERHDEVYRLFVDDLRSARSAL 220


>gi|241518598|ref|YP_002979226.1| phage SPO1 DNA polymerase-related protein [Rhizobium leguminosarum
           bv. trifolii WSM1325]
 gi|240863011|gb|ACS60675.1| phage SPO1 DNA polymerase-related protein [Rhizobium leguminosarum
           bv. trifolii WSM1325]
          Length = 220

 Score =  135 bits (339), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 78/219 (35%), Gaps = 19/219 (8%)

Query: 57  RHIHSPLVQQADSIAQKA--CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIG 114
                P       I   A    L  L     +   C L   +  T+    +    ++++G
Sbjct: 4   ASATRPTRLPPAFIEPHAEGKDLSALHGQAETCERCDLFKNATQTVFGEGSTDARVILVG 63

Query: 115 YTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLS 167
             P D ++I+G+PF G  G +LD+ L    I R+  +++                +   +
Sbjct: 64  EQPGDKEDIAGRPFVGPAGRLLDECLHEAGIDRSLCYVTNAVKHFKFEQRGKRRIHSKPN 123

Query: 168 NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227
             E++ C   +  +++ + P +++ +G              T +     SN+    +  P
Sbjct: 124 AGEIQRCAWWLGGELDFLRPSLVVALGATALYTLMGRSVGLTKER----SNILQAANATP 179

Query: 228 TLATVHPQELIQ------YPLIKKNTWHALITLKKALKN 260
            L T+HP  L++          ++     L  +   L +
Sbjct: 180 LLVTIHPSYLLRIRDHDDRANEQRRFVDDLRLIHDYLSD 218


>gi|197123093|ref|YP_002135044.1| phage SPO1 DNA polymerase-related protein [Anaeromyxobacter sp. K]
 gi|196172942|gb|ACG73915.1| phage SPO1 DNA polymerase-related protein [Anaeromyxobacter sp. K]
          Length = 224

 Score =  134 bits (338), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 76/215 (35%), Gaps = 17/215 (7%)

Query: 58  HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117
               P    A  +     +L  L+        C L      T+      G  +M++G  P
Sbjct: 2   PRRPPPGGTAAPLVPARATLPALRRAAAGCTACPLWERGTQTVFGAGPPGATVMLVGEQP 61

Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRNLSNIE 170
            + ++ +G+PF G  G +LD+ L +  + R   +++                ++  +  E
Sbjct: 62  GNDEDRAGEPFVGPAGRLLDRALAAAGLDRRDAYVTNAVKHFKWEPRGKRRIHQKPNAGE 121

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230
           +  C P +  +I  + P+ ++ +G             +  +  G+             +A
Sbjct: 122 VRACLPWLEAEIAAVRPRAVVCLGATAAQALLG-RGFRLTERRGQPVPSPLAEV---VIA 177

Query: 231 TVHPQELIQYP--LIKKNTW----HALITLKKALK 259
           T+HP  +++ P    ++         L  +   L+
Sbjct: 178 TLHPSAVLRAPDDAARREALAGLVADLARVAALLR 212


>gi|126461677|ref|YP_001042791.1| phage SPO1 DNA polymerase-related protein [Rhodobacter sphaeroides
           ATCC 17029]
 gi|126103341|gb|ABN76019.1| phage SPO1 DNA polymerase-related protein [Rhodobacter sphaeroides
           ATCC 17029]
          Length = 485

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 84/241 (34%), Gaps = 17/241 (7%)

Query: 34  EATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLC 93
           E   E Q    +   A       +   +     A S      SL E K+       C L 
Sbjct: 248 ERAAEMQAAAPTEPPARTAAVARQRAAAAGGPPAASDGSAPGSLAEAKTAAEGCRRCGLW 307

Query: 94  STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHIS 153
           + +   +         +M++G  P D ++++G+PF G  G + D+   +  + R  ++++
Sbjct: 308 ANATQVVFGEGPATARMMVVGEQPGDREDLAGRPFVGPAGQLFDEEAAAAGLDRGSVYVT 367

Query: 154 MISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206
                           ++     E+  CR  +  + +L+ P++++ +G            
Sbjct: 368 NAVKHFKFTPRGKRRIHQKPDAGEVTACRWWLDLERDLVRPRLIVAMGATALASLTG-SG 426

Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL------IKKNTWHALITLKKALKN 260
               +  G    L       P   TVHP  +++ P        ++     L   ++ L+ 
Sbjct: 427 AGILKRRGSLERL---DDGTPLFVTVHPSYILRLPDEAARAEERRRFRADLEEARQLLER 483

Query: 261 L 261
           L
Sbjct: 484 L 484


>gi|332701477|ref|ZP_08421565.1| phage SPO1 DNA polymerase-related protein [Desulfovibrio africanus
           str. Walvis Bay]
 gi|332551626|gb|EGJ48670.1| phage SPO1 DNA polymerase-related protein [Desulfovibrio africanus
           str. Walvis Bay]
          Length = 219

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 70/171 (40%), Gaps = 11/171 (6%)

Query: 80  LKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKM 139
           L         C L   +  T+         LM++G  P D ++  G+PF G  G +LD+ 
Sbjct: 32  LVREAAHCTRCDLYKAATRTVFGEGPVEARLMLVGEIPGDMEDRRGRPFVGPAGRLLDRA 91

Query: 140 LQSIEIMRTQIHISMISPW-------HPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192
           L+   + R+ ++++                +R  S  E+  C   + R++ L+ P+ ++ 
Sbjct: 92  LEEAGVDRSTVYLTNSVKHFKFELTGRRRQHRAPSVSEINACHYWLDRELALVKPRTVVA 151

Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI 243
           +G       F     +  Q  GK+++L         + T+HP  +++ P  
Sbjct: 152 LGGTAARAVFG-KPVRVLQVRGKFADLEP---GRQAMVTIHPSAILRMPEE 198


>gi|121533311|ref|ZP_01665139.1| phage SPO1 DNA polymerase-related protein [Thermosinus
           carboxydivorans Nor1]
 gi|121307870|gb|EAX48784.1| phage SPO1 DNA polymerase-related protein [Thermosinus
           carboxydivorans Nor1]
          Length = 231

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 48/191 (25%), Positives = 88/191 (46%), Gaps = 11/191 (5%)

Query: 78  HELKSLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
            EL++ L + + C LC   +        T    LM++G  P   ++  G P  G +G +L
Sbjct: 12  AELEAALLACNQCALCREGNRGPTSYNGTPDSPLMLVGEGPGGVEDEYGVPLVGPSGQLL 71

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC-RPIIMRQIELISPKILLFIGN 195
           D+ L S+ I R +I+ + +    P GNR  +  E ++C    +  +I L+ PKI++ +G+
Sbjct: 72  DRALASVGITRDRIYTTNVVKCRPRGNRTPTVEEGQVCASRWLDAEITLVKPKIIIALGS 131

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWHA 250
               + +  +A +  ++ G+W         IP +AT HP  L++         K   ++ 
Sbjct: 132 VALKYLYEPNA-RITKDRGRWFMTKY---GIPAIATYHPAYLLRLTGQDLVRAKWEVYYD 187

Query: 251 LITLKKALKNL 261
           L    + L  L
Sbjct: 188 LKAAVERLAEL 198


>gi|182680237|ref|YP_001834383.1| phage SPO1 DNA polymerase-related protein [Beijerinckia indica
           subsp. indica ATCC 9039]
 gi|182636120|gb|ACB96894.1| phage SPO1 DNA polymerase-related protein [Beijerinckia indica
           subsp. indica ATCC 9039]
          Length = 211

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 78/199 (39%), Gaps = 16/199 (8%)

Query: 74  ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
             SL  L+   R+   C L   +  T+     +   L+I+G  P D +++ G PF G  G
Sbjct: 17  PKSLEALREAARTCQRCPLWKHATQTVFGEGPKDARLLIVGEQPGDKEDLQGHPFVGPAG 76

Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELIS 186
            +LDK L  + I R +++++                ++  +  E++ CR  +  +  L+ 
Sbjct: 77  LLLDKALGEVGIDRRRVYVTNAVKHFKFEPRGKRRMHKTPTTTEIKACRFWLEGEFALLE 136

Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ-----YP 241
           PK++L +G    +    +   +  +  G+             L T HP  +++       
Sbjct: 137 PKLVLALGATALHGLLGH-VARIGEMRGEPIPF---GDNAKLLVTTHPSAILRMKEPMRA 192

Query: 242 LIKKNTWHALITLKKALKN 260
               +  + L  +   L+ 
Sbjct: 193 QNYADFLNDLKRIPALLEE 211


>gi|254822543|ref|ZP_05227544.1| hypothetical protein MintA_21619 [Mycobacterium intracellulare ATCC
           13950]
          Length = 219

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 81/219 (36%), Gaps = 19/219 (8%)

Query: 59  IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPS 118
             +     AD    +   +  L+S   + H C L   +  T+      G  +M++G  P 
Sbjct: 2   TATAKAPGADRYLPEERDIDALRSAAETCHGCALFEDATQTVFGNGHPGAPIMLVGEQPG 61

Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG--------NRNLSNIE 170
           D ++ +G+PF G  G +L + L+   I     + +                 ++     E
Sbjct: 62  DQEDRAGEPFVGPAGRLLARALEDAGIDPVLTYQTNAVKHFKFTRKGGKRRIHQKPGRTE 121

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP--- 227
           +  CRP ++ +IE + P++++ +G            +   +  G+   L     I     
Sbjct: 122 VVACRPWLIAEIEAVQPEVIVCLGATAAQSLLGTTFRV-SEQRGRELKLPESVDIARTPE 180

Query: 228 --TLATVHPQELIQYPLIKKN-----TWHALITLKKALK 259
              +ATVHP  +++    +++         L   +  L 
Sbjct: 181 PIVVATVHPSSVLRDRSDRRDEVYQSFVDDLRIARSGLA 219


>gi|193084356|gb|ACF10013.1| phage SPO1 DNA polymerase-related protein [uncultured marine
           crenarchaeote SAT1000-49-D2]
          Length = 180

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 6/178 (3%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L  ++  +++   C LC T  + +     +  D++ IG  P  ++++ G+PF G  G  L
Sbjct: 7   LEIIQEKVKTCEKCDLCITRKNAVPGKGNQNADIIFIGEAPGKNEDLHGEPFIGTAGKKL 66

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           D  L++  + R  ++I+ I    PP NR  +++E   C   +  +I +I+PKI+  +GN 
Sbjct: 67  DDALKNAGLTRNSVYITNIVKCRPPKNRIPNDVEKSTCNEYLKAEIAIINPKIICLLGNT 126

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
                     ++  +N GK+ +            T HP   I    +     + +  L
Sbjct: 127 PYYSILG--GKEISKNHGKFISKDNRMY----FVTFHPAATIYNQKLVNVFKNDISKL 178


>gi|159903330|ref|YP_001550674.1| Uracil-DNA glycosylase [Prochlorococcus marinus str. MIT 9211]
 gi|159888506|gb|ABX08720.1| Uracil-DNA glycosylase [Prochlorococcus marinus str. MIT 9211]
          Length = 191

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 41/176 (23%), Positives = 72/176 (40%), Gaps = 11/176 (6%)

Query: 90  CHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQ 149
           C+        +         LM++G  P   + + GKPF G++G +LD +L+ + I   +
Sbjct: 16  CNCLEPCSKVVVGRGNPSAHLMLVGEAPGAKEELLGKPFVGRSGKVLDNLLEVVGIDHQK 75

Query: 150 I-HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQK 208
             +I  +    PP NR  +  E+    P ++ QI+L+ P +++  G      F      K
Sbjct: 76  DIYICNVMKSRPPNNRRPTRAEIAKHLPWLVHQIKLVKPFVIVLAGATALETFLEIKT-K 134

Query: 209 TYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK-----NTWHALITLKKALK 259
                G W N       I  +   HP  L++ P   K      T   L  ++K ++
Sbjct: 135 ITVLRGTWQNW----RGIAVMPIFHPSYLLRNPSNAKGSPLELTRSDLFEVRKRME 186


>gi|157737025|ref|YP_001489708.1| hypothetical protein Abu_0774 [Arcobacter butzleri RM4018]
 gi|157698879|gb|ABV67039.1| conserved hypothetical protein [Arcobacter butzleri RM4018]
          Length = 222

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 43/189 (22%), Positives = 89/189 (47%), Gaps = 8/189 (4%)

Query: 74  ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
              + ELK+ +   + C LC    + +         +M I   P+ S++  G  + G +G
Sbjct: 40  PNDIKELKNSVEHCYLCELCKVRKNVLFGYGNINSKIMFICDEPTKSEDELGSFYVGNSG 99

Query: 134 NMLDKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192
            +L KM++++  I +  ++I+ +           S+   + C   +++QIELI PK+++ 
Sbjct: 100 ELLSKMIENVLNIKKEDVYITTLVKCKSLNGATNSS--FDTCNDYLLKQIELIKPKLIVS 157

Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
           +G KT   +   +    +Q  GK  N       I  +A   P  L++ P +KK+ ++ ++
Sbjct: 158 LGEKT-YSYLMKNGDNFFQIRGKMLNFN----SIALIAVYSPTFLLRNPSLKKDAYYDML 212

Query: 253 TLKKALKNL 261
            +K  ++ L
Sbjct: 213 KIKSFMEEL 221


>gi|197104365|ref|YP_002129742.1| phage SPO1 DNA polymerase-related protein [Phenylobacterium
           zucineum HLK1]
 gi|196477785|gb|ACG77313.1| phage SPO1 DNA polymerase-related protein [Phenylobacterium
           zucineum HLK1]
          Length = 477

 Score =  134 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 78/222 (35%), Gaps = 15/222 (6%)

Query: 47  DSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTE 106
            +  +P   I    +   + A    Q   +L E+ + ++    C L   +   +      
Sbjct: 256 QAPTEPDRRIVRAAARASRDAPYDGQPPATLEEVAAGVQVCRRCDLYRDATQGVPGEGPR 315

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG---- 162
              LM +G  P D ++++G+PF G  G +LDK L    I R +  ++             
Sbjct: 316 QARLMFVGEQPGDQEDLAGRPFVGPAGGVLDKALAEAGIPRAETFVTNAVKHFKHEPRGK 375

Query: 163 ---NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
              ++     E+  CR  +  +  ++ P++++ +G       F        +   +   L
Sbjct: 376 RRLHKTPDAGEVSACRWWLDAERRIVQPRVVVALGATAALAVFG-KPTPIGKFRQQAIQL 434

Query: 220 CTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
                    + T HP  L++ P  +             L +L
Sbjct: 435 PDQAQG---VVTYHPSYLLRVPDAEAKA----KAYAMFLDDL 469


>gi|219849325|ref|YP_002463758.1| phage SPO1 DNA polymerase-related protein [Chloroflexus aggregans
           DSM 9485]
 gi|219543584|gb|ACL25322.1| phage SPO1 DNA polymerase-related protein [Chloroflexus aggregans
           DSM 9485]
          Length = 210

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 73/185 (39%), Gaps = 7/185 (3%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L  +   ++    C+L       +         +M IG  P   ++  G+PF G +G  L
Sbjct: 7   LFTIAEEVQRCTACNLHRGRTRAVPGEGPANARVMFIGEGPGYHEDRQGRPFVGPSGQFL 66

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP-IIMRQIELISPKILLFIGN 195
           + +L    + R +++I+ +    PP NR+    E+  C    +MRQI  I P +++ +G 
Sbjct: 67  NDLLALAGLRRDEVYIANVVKCRPPQNRDPEPDEIATCTRLFLMRQIAAIDPIVIVTLGR 126

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
            +   F     ++  +  G+  ++         +  +HP   +  P  +         L 
Sbjct: 127 FSMGLFL--PGERISRIHGQPRSVN----GRLIVPMIHPAAALHQPQNRPLLEEDFRRLP 180

Query: 256 KALKN 260
             + +
Sbjct: 181 AIIAD 185


>gi|168700619|ref|ZP_02732896.1| DNA polymerase, bacteriophage-type [Gemmata obscuriglobus UQM 2246]
          Length = 253

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 51/262 (19%), Positives = 92/262 (35%), Gaps = 22/262 (8%)

Query: 2   TSKRILSQ-EQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60
            S   +   +Q+         +GV +            + R E      + P  +     
Sbjct: 1   MSDGPIDLVQQLRAHLHSLGAAGVLFAPRGEPLVIARPAPRAEVVPAEEVAPAEDPLETR 60

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPSD 119
                           L  L + + +   C  L ST L  +  T     ++  +G  P  
Sbjct: 61  RRA-------------LATLAAEVSNCDKCSELFSTRLRAVFGTGPLDPEVAFVGEAPGY 107

Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIM 179
            ++  G+PF GK G +L +++ + ++   Q ++  I    PP  R  +  E   CR I  
Sbjct: 108 EEDAQGEPFVGKGGQLLRRIIAACQLPSAQEYLLNIIKCRPPRTRPPTMAECGNCRDIFR 167

Query: 180 RQIELISPKILLFIGNKTKNFFFNN-DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238
           RQ EL+ PK L+ +G            A       G+          +P + T HP ++ 
Sbjct: 168 RQFELVRPKYLVALGLTASRLLSGKVSATALGALRGQVHQY----RGVPLICTHHPNDID 223

Query: 239 QY--PLIKKNTWHALITLKKAL 258
                 +K+ TW  +  L + +
Sbjct: 224 ADGTGRLKRETWDDMKLLLRTM 245


>gi|227819345|ref|YP_002823316.1| DNA-directed DNA polymerase [Sinorhizobium fredii NGR234]
 gi|227338344|gb|ACP22563.1| putative DNA-directed DNA polymerase protein [Sinorhizobium fredii
           NGR234]
          Length = 232

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 73/175 (41%), Gaps = 11/175 (6%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
            +A S+  L+        C L   +   +         ++++G  P D ++++G+PF G 
Sbjct: 36  AEAPSIAALRKQAEGCERCDLYKNATQLVFGEGPGKARVVLVGEQPGDREDLAGRPFVGP 95

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIEL 184
            G +LD+ L    I R+  +++                +   +  E++ C   +  +++ 
Sbjct: 96  AGRILDECLHEAGIDRSSCYLTNAVKHFKFEQRGKRRLHSRPNAGEVQRCSWWLGAELDK 155

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
           + PK+++ +G    +      A+   +N G   +L    +    L T+HP  L++
Sbjct: 156 LHPKVVVALGATALSSLLGRRARVM-KNRG---DLIPTPAGYSVLITIHPSYLLR 206


>gi|296272664|ref|YP_003655295.1| uracil-DNA glycosylase superfamily [Arcobacter nitrofigilis DSM
           7299]
 gi|296096838|gb|ADG92788.1| Uracil-DNA glycosylase superfamily [Arcobacter nitrofigilis DSM
           7299]
          Length = 222

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 87/189 (46%), Gaps = 7/189 (3%)

Query: 74  ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
              + +L+ L+++ H C L     + +  +     ++M +  +P+ S++     + GK+G
Sbjct: 40  PDDIKQLEELVKNCHLCQLSKYRENVLFGSGNINSNIMFLKESPTISEDEVDAFYVGKSG 99

Query: 134 NMLDKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192
            +L  M++ + ++    ++I+ I       N  +    +  C+  + +QIEL+ PK+L+ 
Sbjct: 100 ELLKNMIEKVLKVPCETVYITNIVKC-ISPNSEIKAEHVNNCKAYLDKQIELVKPKLLVI 158

Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
           +G      F  +D     +  GK      P++ +  + T  P  L++ P  K   +  L+
Sbjct: 159 LGESVYRHF-TSDNTAFSEIRGKV----IPNNDLDIICTYEPSFLLRNPSSKGEAYEDLL 213

Query: 253 TLKKALKNL 261
            +K  ++ +
Sbjct: 214 KIKAIMEQM 222


>gi|254486783|ref|ZP_05099988.1| putative DNA polymerase related protein [Roseobacter sp. GAI101]
 gi|214043652|gb|EEB84290.1| putative DNA polymerase related protein [Roseobacter sp. GAI101]
          Length = 473

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 77/203 (37%), Gaps = 14/203 (6%)

Query: 52  PITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLM 111
           P   +  + +   Q A   +        L + + +   C L  T+   +        DLM
Sbjct: 260 PPARMAQVQA---QLAAHHSAWDGPSDALPAAIAACTRCPLHCTATQAVVGEGPMDADLM 316

Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NR 164
           I+G  P D +++SG+PF G  G + D++     + R++ +++                ++
Sbjct: 317 IVGEQPGDQEDLSGRPFVGPAGQLFDQIAVQAGLDRSRAYVTNAVKHFKFTPRGKKRIHQ 376

Query: 165 NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS 224
             +  E++ CR  +  ++  + PK++L +G                +  GK         
Sbjct: 377 RPNTSEIDHCRWWLDAEVAQVKPKLILGMGATAAEGLTGRRDAILAR-RGKVEEAP---D 432

Query: 225 IIPTLATVHPQELIQYPLIKKNT 247
             P L T+HP  L++ P      
Sbjct: 433 GTPVLLTLHPSYLLRLPDRAAKA 455


>gi|114328194|ref|YP_745351.1| uracil DNA glycosylase superfamily protein [Granulibacter
           bethesdensis CGDNIH1]
 gi|114316368|gb|ABI62428.1| uracil DNA glycosylase superfamily protein [Granulibacter
           bethesdensis CGDNIH1]
          Length = 488

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 82/236 (34%), Gaps = 18/236 (7%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQ-KACSLHELKSLLRSFHD 89
           P+  A  E++ +         P      I +          +    +L E +        
Sbjct: 238 PDMLADAEARVQRMHQAGTTAPRPGAAAISARYRASMPVATEVSPETLDEARQAALQCRR 297

Query: 90  CHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQ 149
           C LC  +  T+      G  LMI+G  P D +++ G+PF G  G +L  ++  + +   +
Sbjct: 298 CSLCEAATRTVWGEGDVGASLMIVGEQPGDREDLEGRPFVGPAGQVLRDLMGKVGMAAAE 357

Query: 150 IHISMISPW-------HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202
           + ++                +++    E+E CR  +  ++ L+ P++ L +G        
Sbjct: 358 VWLTNAVKHFKFLPRGRHRLHQSPDRKEIEACRWWLDLELSLVRPRLTLALGASATFALT 417

Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL------IKKNTWHALI 252
             +     +  G            P L + HP  +++ P        ++     L 
Sbjct: 418 G-NRAAMTRRRGMV---EQGLHGGPVLISWHPSFILRLPNPQESEKARRELEQDLR 469


>gi|120404181|ref|YP_954010.1| phage SPO1 DNA polymerase--like protein [Mycobacterium vanbaalenii
           PYR-1]
 gi|119956999|gb|ABM14004.1| phage SPO1 DNA polymerase-related protein [Mycobacterium
           vanbaalenii PYR-1]
          Length = 217

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 82/216 (37%), Gaps = 20/216 (9%)

Query: 64  VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123
           +  A     +   L  L +  +S   C L   +   +  +   G  +M++G  P D +++
Sbjct: 3   IVGAAEFVPQTRELSTLAAAAQSCRGCDLFENASRAVFGSGPVGARMMLVGEQPGDREDV 62

Query: 124 SGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP---------GNRNLSNIEMEIC 174
           +G+PF G  G +LDK L    + R  ++++                  ++  S  E+  C
Sbjct: 63  AGEPFVGPAGRLLDKALDEAGLPRAPVYLTNAVKHFKFVPAERGTRRIHKTPSRTEVVAC 122

Query: 175 RPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL-----CTPHSIIPTL 229
           RP ++ +++ + P +++ +G         N  + T    G+  +L              +
Sbjct: 123 RPWLIAEMQAVEPAVVVLLGATAAKSLLGNAFRLTAH-RGEVLSLPAETKPVGGRDAKVV 181

Query: 230 ATVHPQELIQYPLIKKN-----TWHALITLKKALKN 260
            TVHP  +++ P   +          L    + L  
Sbjct: 182 VTVHPSSVLRGPSQAREESFRSLVSDLRFAGELLDA 217


>gi|254477893|ref|ZP_05091278.1| putative DNA polymerase related protein [Ruegeria sp. R11]
 gi|214028478|gb|EEB69314.1| putative DNA polymerase related protein [Ruegeria sp. R11]
          Length = 474

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 71/191 (37%), Gaps = 13/191 (6%)

Query: 79  ELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDK 138
           +L S + +   C L   +   +     +  +LM +G  P D +++ G+PF G  G + D 
Sbjct: 284 DLPSAISACTRCPLHKPATQAVAGEGPQSAELMFVGEQPGDHEDLVGRPFVGPAGQLFDL 343

Query: 139 MLQSIEIMRTQIHISMISPW-------HPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191
           ++    + R +  ++                ++  S  E+  C P +  +I  + P++++
Sbjct: 344 LMAEAGLKREEAFVTNAVKHFKFLPRGRKRLHQKPSQDEIATCNPWLRAEIAQVQPRLIV 403

Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKKNTWH 249
            +G            +      G+          +P L T+HP  L++       K    
Sbjct: 404 AMGASAAQALLG-SGKAITDRRGRV---EWRADGLPVLITLHPSFLLRLSDAAAVKQARA 459

Query: 250 ALITLKKALKN 260
            ++   +   +
Sbjct: 460 DMLADLRRAAD 470


>gi|221638650|ref|YP_002524912.1| Phage SPO1 DNA polymerase-related protein [Rhodobacter sphaeroides
           KD131]
 gi|221159431|gb|ACM00411.1| Phage SPO1 DNA polymerase-related protein [Rhodobacter sphaeroides
           KD131]
          Length = 485

 Score =  133 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 83/241 (34%), Gaps = 17/241 (7%)

Query: 34  EATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLC 93
           E   E Q    +   A       +   +     A        SL E K+       C L 
Sbjct: 248 ERAAEMQAAALTEPPARTAAVARQRAAAAGGPVAAGDGSAPGSLAEAKTAAEGCRRCGLW 307

Query: 94  STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHIS 153
           + +   +         +MI+G  P D ++++G+PF G  G + D+   +  + R  ++++
Sbjct: 308 ANATQVVFGEGPATARMMIVGEQPGDREDLAGRPFVGPAGQLFDEEAAAAGLDRQAVYVT 367

Query: 154 MISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206
                           ++     E+  CR  +  + +L+ P++++ +G            
Sbjct: 368 NAVKHFKFAPRGKRRIHQKPDAGEVTACRWWLDLERDLVRPRLIVAMGATALASLTG-SG 426

Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL------IKKNTWHALITLKKALKN 260
               +  G    L       P   TVHP  +++ P        ++     L   ++ L+ 
Sbjct: 427 AGILKRRGSVERL---DDGTPLFVTVHPSYILRLPDEAARAEERRRFRADLEAARQLLER 483

Query: 261 L 261
           L
Sbjct: 484 L 484


>gi|307328601|ref|ZP_07607774.1| phage SPO1 DNA polymerase-related protein [Streptomyces
           violaceusniger Tu 4113]
 gi|306885713|gb|EFN16726.1| phage SPO1 DNA polymerase-related protein [Streptomyces
           violaceusniger Tu 4113]
          Length = 219

 Score =  133 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 74/217 (34%), Gaps = 17/217 (7%)

Query: 57  RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYT 116
                     A  +   A  L  L+        C L   +  T+          M++G  
Sbjct: 4   TKSPEDAYTAAPFVPDGA-DLGALREAAAGCRGCPLHRDATQTVFGAGDPDARAMLVGEQ 62

Query: 117 PSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSN-------- 168
           P D ++  GKPF G  G +LD+ L    I   + +I+                       
Sbjct: 63  PGDQEDRQGKPFVGPAGKVLDRALDEAGIDPDETYITNAVKHFKFTYVPERGKRRIHKPP 122

Query: 169 --IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS-NLCTPHSI 225
              E+  C P +  ++ELI P++++ +G         +  + T Q   +   +   P   
Sbjct: 123 SLRELAACGPWLAAEVELIGPEVIVALGATAGKALLGSSFRVTQQRGTRLEGDASGPARG 182

Query: 226 IPTLATVHPQELIQYPLIKKNTWH----ALITLKKAL 258
              + T+HP  +++    ++  +      L    +AL
Sbjct: 183 ALIVPTIHPSAVLRA-DDREAAYEGLVADLRVAAEAL 218


>gi|302553346|ref|ZP_07305688.1| uracil DNA glycosylase superfamily protein [Streptomyces
           viridochromogenes DSM 40736]
 gi|302470964|gb|EFL34057.1| uracil DNA glycosylase superfamily protein [Streptomyces
           viridochromogenes DSM 40736]
          Length = 216

 Score =  133 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 77/216 (35%), Gaps = 13/216 (6%)

Query: 56  IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115
           +R   S     A+        L  L+        C L   +  T+  +      +M++G 
Sbjct: 2   VRAQASEDAYTAEPFVPGGGGLSALRRAAAECRGCPLHRDATQTVFGSGDADARVMLVGE 61

Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG---------NRNL 166
            P D ++  G+PF G  G +LD+ L+   I   + +++                  ++  
Sbjct: 62  QPGDQEDRQGEPFVGPAGRVLDRALEEAGIDPAEAYVTNAVKHFKFTQAEPRKRRIHKAP 121

Query: 167 SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII 226
           S  EM  C P +  ++ ++ P++++ +G         +  +   Q  G            
Sbjct: 122 SLREMTACGPWLAAELAVVEPELIVVLGATAGKALLGSSFRV-TQVRGTVLEEEIHGRAE 180

Query: 227 PTLATVHPQELIQYPLIKKNTW---HALITLKKALK 259
             + TVHP  +++    +         L    +AL+
Sbjct: 181 RLVPTVHPSSVLRADDREAAYRGLVSDLRVAAQALR 216


>gi|300114529|ref|YP_003761104.1| phage SPO1 DNA polymerase-like protein [Nitrosococcus watsonii
           C-113]
 gi|299540466|gb|ADJ28783.1| phage SPO1 DNA polymerase-related protein [Nitrosococcus watsonii
           C-113]
          Length = 189

 Score =  133 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/193 (28%), Positives = 92/193 (47%), Gaps = 6/193 (3%)

Query: 68  DSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127
           D + +KA +LHEL      +   ++       +         +MIIG  P   +  +G+P
Sbjct: 2   DDLLKKAATLHELAQYCNRYLGPNVVKGEK-LVFGEGPSSAKIMIIGEAPGVQEAKTGQP 60

Query: 128 FSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP 187
           F G +G +L K+L  I + R QI+IS I   HPPGNR     E++   P ++RQIEL+ P
Sbjct: 61  FVGSSGQLLTKLLHQIGLKREQIYISNILKTHPPGNRKPHRSEIKRELPFLLRQIELLQP 120

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247
           ++L+ +G        + +A K  +  G+W  +      +PT  T HP   ++    K   
Sbjct: 121 QLLVLLGATALQALLDPNA-KITKLRGQWLEI----KNLPTFVTYHPAAALRDETKKAAL 175

Query: 248 WHALITLKKALKN 260
                +L+  L++
Sbjct: 176 AQDFASLQGYLES 188


>gi|241205676|ref|YP_002976772.1| phage SPO1 DNA polymerase-related protein [Rhizobium leguminosarum
           bv. trifolii WSM1325]
 gi|240859566|gb|ACS57233.1| phage SPO1 DNA polymerase-related protein [Rhizobium leguminosarum
           bv. trifolii WSM1325]
          Length = 484

 Score =  133 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 96/237 (40%), Gaps = 17/237 (7%)

Query: 35  ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94
           A+ ES+ +  +   A Q +     +              A +L  L +   +   C L +
Sbjct: 248 ASAESKVRAMAAREATQSLPFHDRLQEAARSIPAEPEAPAGTLEALGAEAAACTRCPLHA 307

Query: 95  TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154
            +  T+        ++M +G  P D ++ISG+PF G  G +LD+++    I R+ ++++ 
Sbjct: 308 KATQTVFGEGPRDAEVMFVGEQPGDQEDISGRPFVGPAGRLLDQVISEAGIDRSTLYVTN 367

Query: 155 ISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207
                          ++  +  E++ CR  +  ++ LI PK+++ +G    +   +   +
Sbjct: 368 AVKHFKYEPRGKRRIHQKPNMGEVKHCRWWLNLEMALIKPKLVVAMGATALSALTDTKQR 427

Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK------KNTWHALITLKKAL 258
                 GK   +    +      TVHP  L++ P  +            ++T+++ +
Sbjct: 428 LQ-DVRGKAIAIDERRT---LFVTVHPSYLLRIPDERLKAEELARFREDMLTVQRLM 480


>gi|119898540|ref|YP_933753.1| putative DNA polymerase related protein [Azoarcus sp. BH72]
 gi|119670953|emb|CAL94866.1| putative DNA polymerase related protein [Azoarcus sp. BH72]
          Length = 216

 Score =  133 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 76/209 (36%), Gaps = 18/209 (8%)

Query: 59  IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPS 118
             +     A    Q   +L EL++   +   C L   +  T+     +   +M++G  P 
Sbjct: 2   PPAQPKPTAAPFVQPDATLAELRAAAGACTGCDLYRDATQTVFGEGPDDAPVMLVGEQPG 61

Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM------ISPWHPPGNRNLSNI--E 170
           D+++  G PF G  G +LD+ L    I R++ +++                 + +    E
Sbjct: 62  DAEDRQGHPFVGPAGKLLDRALTDAGIDRSRSYVTNAVKHFKWIFTRGHKRLHQTPRTVE 121

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230
           ++ C P +  +I  + P++L+ +G             +     G              +A
Sbjct: 122 VQACAPWLEAEIARVKPQVLILLGATAAKSLLG-SGFRVTAQRGVPQPSPLAP---RVVA 177

Query: 231 TVHPQELIQ--YPLIKKNTW----HALIT 253
           T+HP  L++      ++  +      L  
Sbjct: 178 TIHPSALLRMANAEQRERAYAAFVADLRA 206


>gi|307721220|ref|YP_003892360.1| Uracil-DNA glycosylase superfamily [Sulfurimonas autotrophica DSM
           16294]
 gi|306979313|gb|ADN09348.1| Uracil-DNA glycosylase superfamily [Sulfurimonas autotrophica DSM
           16294]
          Length = 223

 Score =  133 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 82/190 (43%), Gaps = 7/190 (3%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
           +K  +L  L   + S H C L  +   ++    ++   L+II Y+ S + + S   ++G+
Sbjct: 40  EKPNTLEALAQNIASCHLCDLSKSRTQSMSGYGSKDAKLVIIDYSVSQAQDSSNSYYAGR 99

Query: 132 TGNMLDKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
           +G  L  M++ +  +    I+++      P  +   S  E   C+  +  Q++ I PK++
Sbjct: 100 SGETLKNMIEKVLHLSIDDIYLTHAVKCKPLQSNKPSPSEYNSCKNYLFSQLDFIKPKVI 159

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
           + +G         +         G   +          +   HPQ L++ P +KK T + 
Sbjct: 160 VTLGEDAYTHITGDT--NFENVRGHVIDY----KEYKLIPIYHPQYLLRNPHLKKITLND 213

Query: 251 LITLKKALKN 260
           L T+K  L++
Sbjct: 214 LKTIKSCLQD 223


>gi|78777161|ref|YP_393476.1| uracil-DNA glycosylase superfamily protein [Sulfurimonas
           denitrificans DSM 1251]
 gi|78497701|gb|ABB44241.1| Uracil-DNA glycosylase superfamily [Sulfurimonas denitrificans DSM
           1251]
          Length = 219

 Score =  132 bits (333), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 84/188 (44%), Gaps = 6/188 (3%)

Query: 73  KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
           K  +++EL   + + + C L  +   ++        D+MII Y+ S  ++ +   + G++
Sbjct: 37  KPLTINELSKEVSTCYLCDLSKSRTQSMSGYGNSNADVMIIDYSVSLGEDNTNSYYCGRS 96

Query: 133 GNMLDKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191
           G++L  M++++ E+    ++ +      P  ++  S  E + C+  +  QIE + PK+++
Sbjct: 97  GDILKNMIENVLELKIEDVYFTHAIKCKPLNSKTPSESEWDSCKNYLFSQIEFVKPKVVV 156

Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
            +G         ++        G   +          +   HP  L++ P  KK  ++ L
Sbjct: 157 TLGKDA-YAKVTSENDNFQNVRGHVIDF----KSYKLVPIYHPNYLLRNPDDKKIAFNDL 211

Query: 252 ITLKKALK 259
            T+K  LK
Sbjct: 212 KTIKSLLK 219


>gi|222102769|ref|YP_002539808.1| hypothetical protein Avi_7466 [Agrobacterium vitis S4]
 gi|221739370|gb|ACM40103.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 492

 Score =  132 bits (333), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 94/235 (40%), Gaps = 14/235 (5%)

Query: 35  ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94
           A  E++  + +   A +P+     +     +   +   +A ++  L+   R  + C L  
Sbjct: 259 AGAEAKLIDMAQRQASEPLPFHHRLQDAAARVPAAPVAEADTIDALRQEARRCNRCDLSC 318

Query: 95  TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154
            +  T+         +M++G  P D ++++G+PF G  G + D+ L    + R  ++++ 
Sbjct: 319 RATQTVFGEGPVDAKIMVVGEQPGDQEDLAGRPFVGPAGRVFDEALAQAGMDRRALYVTN 378

Query: 155 ISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207
                          ++  +  E++ CR  + ++IE++ PK+++ +G         +   
Sbjct: 379 AVKHFKYEPRGKRRIHQRPNIAEVQQCRWWLTQEIEMVKPKLIVAMGAIALFS-LTDRKD 437

Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTWHALITLKKALKNL 261
           +      +               TVHP  L++ P   K+N    L   ++ +  +
Sbjct: 438 RLEDVRSRP---IVMDDTRHLFVTVHPSYLLRIPDEIKRN--EELARFREDISQI 487


>gi|300787076|ref|YP_003767367.1| uracil-DNA glycosylase [Amycolatopsis mediterranei U32]
 gi|299796590|gb|ADJ46965.1| uracil-DNA glycosylase [Amycolatopsis mediterranei U32]
          Length = 210

 Score =  132 bits (333), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 76/197 (38%), Gaps = 15/197 (7%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
            L  L+S       C L   +  T+    T    ++++G  P D ++++G+PF G  G +
Sbjct: 14  DLDRLRSAASGCQACPLYQDATQTVFGEGTARAKVLVVGEQPGDKEDLAGEPFVGPAGKL 73

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPG---------NRNLSNIEMEICRPIIMRQIELIS 186
           LD+  +     R  ++++                  ++     E+  CRP ++ ++  + 
Sbjct: 74  LDRAFEEAGFDRRSLYVTNAVKHFKFKRDERGKRRIHQKPGRTEVVACRPWLLAELRSVR 133

Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII--PTLATVHPQELIQYPLIK 244
           P+++L +G            + T    G+        + +    +ATVHP  +++ P   
Sbjct: 134 PELVLLLGATAAQSLLGPKFRLTAH-RGEPLEPPEELAGLVPAAMATVHPSAVLRAPDRD 192

Query: 245 ---KNTWHALITLKKAL 258
               +    L    K L
Sbjct: 193 EAYASFVADLQAAAKLL 209


>gi|86360506|ref|YP_472394.1| DNA-directed DNA polymerase protein [Rhizobium etli CFN 42]
 gi|86284608|gb|ABC93667.1| probable DNA-directed DNA polymerase protein [Rhizobium etli CFN
           42]
          Length = 213

 Score =  132 bits (333), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 73/183 (39%), Gaps = 12/183 (6%)

Query: 64  VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123
              A  +A  A S+ EL+        C L   +   +        +++++G  P D ++I
Sbjct: 9   PALALEVAD-AESIAELRHQAEDCTRCDLYRNATQIVFGEGPGKAEIVLVGEQPGDREDI 67

Query: 124 SGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRP 176
           +G+PF G  G++LD  L    + R + +++                +   +  E+  C  
Sbjct: 68  TGRPFVGPAGHLLDLCLNEAGLDRQRCYVTNAVKHFKFTPRGKRRLHAKPNAGEIRRCAW 127

Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236
            +  ++ ++ PK+++ +G           A+      G       P +  P L T+HP  
Sbjct: 128 WLGAELNILQPKLVVALGASALYALLGPKAKL-TPERGHILQ---PANHPPVLVTIHPSY 183

Query: 237 LIQ 239
           L++
Sbjct: 184 LLR 186


>gi|55379408|ref|YP_137258.1| uracil DNA glycosylase superfamily protein [Haloarcula marismortui
           ATCC 43049]
 gi|55232133|gb|AAV47552.1| uracil DNA glycosylase superfamily protein [Haloarcula marismortui
           ATCC 43049]
          Length = 195

 Score =  132 bits (333), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 2/172 (1%)

Query: 87  FHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI 145
              C  LC +    +        DL+ +G  P  +++  G+PF G++G++LD  L+   +
Sbjct: 12  CERCDDLCGSRSRIVNGVGPADADLLFVGEAPGANEDEQGEPFVGRSGDVLDAGLRDAGL 71

Query: 146 MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
            R  + I+      PP NR+  N E+  CR  +  +I+ + P++++ +G          D
Sbjct: 72  DRGDVRITNCVRCRPPDNRDPRNGELANCRDYLETEIDRVDPEVVVTLGKVPAEHLLERD 131

Query: 206 AQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKA 257
              T +  G   ++         L +VHP   +  P  K+    AL T  + 
Sbjct: 132 VAVTGEA-GDVFDVAIAGQPRRVLVSVHPAATLYDPSQKETFEAALTTAAEF 182


>gi|114705234|ref|ZP_01438142.1| Uracil-DNA glycosylase:Phage SPO1 DNA polymerase-related protein
           [Fulvimarina pelagi HTCC2506]
 gi|114540019|gb|EAU43139.1| Uracil-DNA glycosylase:Phage SPO1 DNA polymerase-related protein
           [Fulvimarina pelagi HTCC2506]
          Length = 501

 Score =  132 bits (333), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 95/257 (36%), Gaps = 21/257 (8%)

Query: 22  SGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLV----QQADSIAQKACSL 77
           +G           A      + + +    + +  +     P++     +A++ +    ++
Sbjct: 245 AGAEAAQRRMIETAPSLPSLRHEKMTERREAVMGLDSADEPMLGLDGDEANTGSNLPKTI 304

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            + +    S   C L   +  T+     E   ++ +G  P D ++I+G+PF G  G + D
Sbjct: 305 EDARRAAASCQACPLWEPATQTVFGKGPEDAPVIFVGEQPGDQEDIAGEPFVGPAGKVFD 364

Query: 138 KMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKIL 190
           + L S  + R Q +++                +   +  E++ CR  +  + EL+ PK++
Sbjct: 365 EALLSAGVDRKQAYVTNAVKHFKFTPRGKRRIHAKPNMGEIKTCRWWLDLERELVKPKLI 424

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI------K 244
           + +G                 +  K  NL      I  L TVHP  +++ P        +
Sbjct: 425 VALGATAAQAVLG-KTVTIRDSRSKLINLT---DEIRFLVTVHPSYILRLPDAAAQERER 480

Query: 245 KNTWHALITLKKALKNL 261
           +     +  + K +  L
Sbjct: 481 QAFRADMGLVLKTVPEL 497


>gi|327539936|gb|EGF26537.1| Uracil DNA glycosylase superfamily protein [Rhodopirellula baltica
           WH47]
          Length = 496

 Score =  132 bits (333), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 81/206 (39%), Gaps = 17/206 (8%)

Query: 69  SIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128
           S  + + S+  L+        C L   +  T+         L+++G  P D ++++G+PF
Sbjct: 294 STGESSQSIARLREAAAVCQGCDLHGPATQTVFGVGNPNAKLVLVGEQPGDREDLAGEPF 353

Query: 129 SGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQ 181
            G  G +L + L  + +   +++I+                +   +  E+  CRP +  +
Sbjct: 354 VGPAGQLLRETLNDVGLDPAELYITNSVKHFKFKPTGKRRLHVKPAAREVAACRPWLEAE 413

Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241
           +++I PK+++ +G             +  ++ G+            T+AT HP  +++ P
Sbjct: 414 LDVIRPKMVVALGATAAGVVLGP-GFRLLKSRGQVQR---SDHAKWTIATYHPSAILRVP 469

Query: 242 LI------KKNTWHALITLKKALKNL 261
                   ++     L    +  + L
Sbjct: 470 NEATRETMRQAFLEDLHFAAEHYRML 495


>gi|126730048|ref|ZP_01745860.1| Uracil-DNA glycosylase superfamily protein [Sagittula stellata
           E-37]
 gi|126709428|gb|EBA08482.1| Uracil-DNA glycosylase superfamily protein [Sagittula stellata
           E-37]
          Length = 488

 Score =  132 bits (333), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 92/245 (37%), Gaps = 20/245 (8%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLH---ELKSLLRSF 87
           P  +   E   +  +  +A+                    A++A  L       + L+S 
Sbjct: 233 PEAQLIPELLAQADARATAMAADAPTLAPARAAPILDRLRAEQAAKLDTQDAFLTALKSC 292

Query: 88  HDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR 147
             C L  ++   +     E   LM +G  P D+++++G+PF+G  G M DK LQ   I R
Sbjct: 293 RRCPLWESATQPVAGEGPEDAALMFVGEQPGDTEDLTGRPFTGPAGQMFDKALQVNGIRR 352

Query: 148 TQIHISMIS---PWHPPG----NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF 200
            +  ++       + P G    ++N    E+  C+  +  +I+ ++P++++ +G      
Sbjct: 353 QEAFVTNAVKHFKFRPRGKRRLHQNPDRDEIAHCKWWLDLEIQRVAPRLIVVMGGTALQS 412

Query: 201 FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH------ALITL 254
              +      +  G+           P L TVHP  +++ P  +            L   
Sbjct: 413 LTGSREGL-LKRRGR---FEHTPEDTPILVTVHPSYILRLPDERLRAEETARFLADLALA 468

Query: 255 KKALK 259
            + L 
Sbjct: 469 ARWLA 473


>gi|146278297|ref|YP_001168456.1| phage SPO1 DNA polymerase-related protein [Rhodobacter sphaeroides
           ATCC 17025]
 gi|145556538|gb|ABP71151.1| phage SPO1 DNA polymerase-related protein [Rhodobacter sphaeroides
           ATCC 17025]
          Length = 485

 Score =  132 bits (332), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 83/237 (35%), Gaps = 13/237 (5%)

Query: 21  DSG-VYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHE 79
           ++G +  +       A            +    +   R   +    +     + A  L +
Sbjct: 235 EAGLIPDLIRGAAGRAAAMQAAAPTEPPARTAAMARQREAAAGGSARRAGAGEPAA-LPQ 293

Query: 80  LKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKM 139
            K+   +   C L + +   +         +M++G  P D ++++G+PF G  G +LD+ 
Sbjct: 294 AKAEAEACRRCGLWAHATQVVFGEGPPRARMMMVGEQPGDCEDLAGRPFVGPAGQLLDEE 353

Query: 140 LQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLF 192
             +  + R+ ++++                ++     E+  CR  +  + +L+ P++++ 
Sbjct: 354 ATAAGLDRSTLYVTNAVKHFKFSARGKRRIHQKPDAGEVTACRWWLDLERDLVRPRLIVA 413

Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249
           +G                +  G    L       P   TVHP  +++ P     T  
Sbjct: 414 MGATALASLTG-TGAGILRRRGTVERLE---DGTPVFVTVHPSYILRLPDAAAQTEE 466


>gi|218673831|ref|ZP_03523500.1| probable DNA-directed DNA polymerase protein [Rhizobium etli GR56]
          Length = 213

 Score =  132 bits (332), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 74/182 (40%), Gaps = 11/182 (6%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
             A S+ +L+        C L   +   +    ++  +++++G  P D ++I+G+PF G 
Sbjct: 16  ADADSIAKLRHQAEGCTRCDLYRNATQIVFGEGSDKAEIVLVGEQPGDREDIAGRPFVGP 75

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIEL 184
            G +LD  L+   + R + +++                +   +  E+  C   +  ++ +
Sbjct: 76  AGRLLDHCLEEAGLDRGRCYVTNAVKHFKFTPRGKRRLHAKPNAGEIRRCAWWLGAELNI 135

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK 244
           + PK+++ +G           A+      G       P +  P L T+HP  L++    K
Sbjct: 136 LQPKLVVALGASALYALLGPKAKL-TPERGHILQ---PRNHPPVLVTIHPSFLLRIRDEK 191

Query: 245 KN 246
           + 
Sbjct: 192 EK 193


>gi|83943534|ref|ZP_00955993.1| putative uracil-DNA glycosylase [Sulfitobacter sp. EE-36]
 gi|83845766|gb|EAP83644.1| putative uracil-DNA glycosylase [Sulfitobacter sp. EE-36]
          Length = 473

 Score =  132 bits (332), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 68/179 (37%), Gaps = 13/179 (7%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
             L   + +   C L   +   +        DLMI+G  P D +++SG+PF G  G + D
Sbjct: 283 DALAKDIAACTRCPLHCNATQAVPGEGPMDADLMIVGEQPGDQEDLSGRPFVGPAGQLFD 342

Query: 138 KMLQSIEIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
            +     + R +  ++                ++  +  E++ CR  +  +I  + PK++
Sbjct: 343 HIAGRAGLQRDKAFVTNAVKHFKFTPRGKRRMHQRPNASEIQHCRWWLDAEIAQVKPKLI 402

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKKNT 247
           L +G              T +  G      +     P L T+HP  L++   P  K + 
Sbjct: 403 LGMGATAAEGLTGRRDTITAR-RGTVEQTPS---GTPVLLTLHPSYLLRLPDPQAKADA 457


>gi|58039251|ref|YP_191215.1| DNA polymerase related protein [Gluconobacter oxydans 621H]
 gi|58001665|gb|AAW60559.1| DNA polymerase related protein [Gluconobacter oxydans 621H]
          Length = 499

 Score =  132 bits (332), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 85/216 (39%), Gaps = 8/216 (3%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P   A  E++ +  +             + +     A+ +   A +L +L + +R+   C
Sbjct: 255 PQLVAGAEARVRTMAEQELQPAPAFHERLRAREQLPAEPMPDVAENLEDLAAQVRTCTAC 314

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150
            L  ++   +         +M++G  P D ++++G+PF G  G +L + L    + R  +
Sbjct: 315 PLHCSATQAVVGEGPADARIMVVGEQPGDQEDLAGRPFVGPAGQLLHEALGEAGVDRGAL 374

Query: 151 HISMISPW-------HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
           +++                ++N     +  CRP + ++I LI PK+++ +G        +
Sbjct: 375 YLTNAVKHFRFRLQGRRRIHQNPDAGHVAACRPWLEQEIALIRPKLIVSLGATALRA-LD 433

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
                     G    +    + +  LA  HP  L++
Sbjct: 434 GPGMAMSDVRGTSWTVGRGENAVRRLALAHPSWLLR 469


>gi|21222880|ref|NP_628659.1| DNA polymerase-like protein [Streptomyces coelicolor A3(2)]
 gi|256786009|ref|ZP_05524440.1| DNA polymerase related protein [Streptomyces lividans TK24]
 gi|289769904|ref|ZP_06529282.1| uracil DNA glycosylase superfamily protein [Streptomyces lividans
           TK24]
 gi|7242712|emb|CAB77286.1| putative DNA polymerase related protein [Streptomyces coelicolor
           A3(2)]
 gi|289700103|gb|EFD67532.1| uracil DNA glycosylase superfamily protein [Streptomyces lividans
           TK24]
          Length = 212

 Score =  132 bits (332), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 67/195 (34%), Gaps = 13/195 (6%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L  L++       C L   +  T+         +M++G  P D ++  GKPF G  G++L
Sbjct: 19  LPALRAAAAECRGCPLHRDATQTVFGAGKASARVMLVGEQPGDQEDRQGKPFVGPAGHLL 78

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSN---------IEMEICRPIIMRQIELISP 187
           D+ L    +     +++                         E   C P +  +++ + P
Sbjct: 79  DRALAEAGLDPADAYVTNAVKHFKFTRAEPRKRRIHKAPTLRETAACGPWLAAELDRVEP 138

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK--- 244
           ++++ +G         +  +   +  G              + TVHP  +++    +   
Sbjct: 139 ELIVVLGATAGKALLGSSFRV-TRVRGTVLEEEIHGRPQRLVPTVHPSAVLRADDREAAY 197

Query: 245 KNTWHALITLKKALK 259
           +     L    +AL 
Sbjct: 198 RGLLSDLEVAARALA 212


>gi|220917884|ref|YP_002493188.1| phage SPO1 DNA polymerase-related protein [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219955738|gb|ACL66122.1| phage SPO1 DNA polymerase-related protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 224

 Score =  132 bits (332), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 76/213 (35%), Gaps = 13/213 (6%)

Query: 58  HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117
              +P    A  +     +L  L+        C L      T+         +M++G  P
Sbjct: 2   PRRAPPGGTAAPLVPARATLPALRRAAAGCTACPLWERGTQTVFGAGRTRATVMLVGEQP 61

Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRNLSNIE 170
            + ++ +G+PF G  G +LD+ L +  + R   +++                ++  +  E
Sbjct: 62  GNDEDRAGEPFVGPAGRLLDRALAAAGLDRRDAYVTNAVKHFKWEPRGKRRIHQKPNAAE 121

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230
           +  C P +  +I  + P+ L+ +G             +  +  G+             +A
Sbjct: 122 VRACLPWLEAEIAAVRPRALVCLGATAAQALLG-RGFRLTERRGQPVPSPLAEV---VIA 177

Query: 231 TVHPQELIQYP--LIKKNTWHALITLKKALKNL 261
           T+HP  +++ P    ++     L+     +  L
Sbjct: 178 TLHPSAVLRAPDDAARREALAGLVADLARVAEL 210


>gi|254457996|ref|ZP_05071423.1| uracil-DNA glycosylase superfamily protein [Campylobacterales
           bacterium GD 1]
 gi|207085389|gb|EDZ62674.1| uracil-DNA glycosylase superfamily protein [Campylobacterales
           bacterium GD 1]
          Length = 218

 Score =  132 bits (331), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 41/188 (21%), Positives = 85/188 (45%), Gaps = 6/188 (3%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
           ++  +L+EL   + S H C L  +   ++        +LMI+ ++ S SD+ +   +SG+
Sbjct: 36  EEPKTLNELSQNISSCHLCDLSKSRQQSMSGYGNPNAELMIVDFSVSMSDDSNNGYYSGR 95

Query: 132 TGNMLDKMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
           +G  L  M++  I +    ++ +      P  +   S  E + C+  +  QI+ + PK++
Sbjct: 96  SGESLTNMIEKVIGLKTDDVYFTHAIKCKPLNSNVPSASEWDSCKSYLFTQIDFVKPKVI 155

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
           + +G +   F   ++        G   +          +   HPQ L++ P +K+ T + 
Sbjct: 156 VTLGEEA-YFKLTSEESDFQNVRGHVIDF----KKYKLIPIYHPQFLLRNPELKRITLND 210

Query: 251 LITLKKAL 258
           L T+K  L
Sbjct: 211 LKTIKSCL 218


>gi|32472802|ref|NP_865796.1| DNA polymerase related protein [Rhodopirellula baltica SH 1]
 gi|32444039|emb|CAD73481.1| putative DNA polymerase related protein [Rhodopirellula baltica SH
           1]
          Length = 496

 Score =  132 bits (331), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 80/206 (38%), Gaps = 17/206 (8%)

Query: 69  SIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128
           S  + + S+  L+        C L   +  T+         L+++G  P D ++++G+PF
Sbjct: 294 STGESSQSIARLREAAAVCQGCDLHGPATQTVFGVGNPNAKLVLVGEQPGDREDLAGEPF 353

Query: 129 SGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQ 181
            G  G +L + L  + +   +++I+                +   +  E+  CRP +  +
Sbjct: 354 VGPAGQLLRETLNDVGLDPAELYITNSVKHFKFKPTGKRRLHVKPAAREVAACRPWLEAE 413

Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241
           +++I PK+++ +G             +  ++ G+          I   AT HP  +++ P
Sbjct: 414 LDVIRPKMVVALGATAAGVLLGP-GFRLLKSRGQVQRSDHAKWTI---ATYHPSAILRVP 469

Query: 242 LI------KKNTWHALITLKKALKNL 261
                   ++     L    +  + L
Sbjct: 470 NEATRETMRQAFLDDLHFAAEHYRML 495


>gi|296116415|ref|ZP_06835029.1| Uracil-DNA glycosylase superfamily protein [Gluconacetobacter
           hansenii ATCC 23769]
 gi|295977008|gb|EFG83772.1| Uracil-DNA glycosylase superfamily protein [Gluconacetobacter
           hansenii ATCC 23769]
          Length = 408

 Score =  132 bits (331), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 89/255 (34%), Gaps = 29/255 (11%)

Query: 18  FYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSI-AQKACS 76
           ++   G      E        +      ++ A     +     SP +  A+ +  ++  +
Sbjct: 167 WHVQMG------ERVMRWDGTTLHPGTPLEGA-----DPASFPSPALPLAEGMDIERITA 215

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L  +    RS   C +   +  T+    T    LM +G  P D ++++G+PF G  G + 
Sbjct: 216 LPAVAEAARSCLTCAMAHHATQTVFGEGTTTASLMFVGEQPGDQEDLAGRPFVGPAGQLF 275

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKI 189
           D+ L  + I R  ++++                ++     E+  C P +  +  ++ P++
Sbjct: 276 DRALHEVGIARDDVYVTNTVKHFKFFNRNGRRIHQKAGMEEIRACAPWLHAERRMVRPRL 335

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK---- 245
           L+ +G    +      +    +   +   L         L TVHP  L++ P        
Sbjct: 336 LVMLGATAASAILQ-RSVVIGRERSRPITLDDGTCG---LVTVHPSFLLRQPTEDARSRE 391

Query: 246 --NTWHALITLKKAL 258
                  L   +  +
Sbjct: 392 YLRFIEDLRLARSLI 406


>gi|239834976|ref|ZP_04683304.1| Uracil-DNA glycosylase superfamily [Ochrobactrum intermedium LMG
           3301]
 gi|239823039|gb|EEQ94608.1| Uracil-DNA glycosylase superfamily [Ochrobactrum intermedium LMG
           3301]
          Length = 477

 Score =  132 bits (331), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 88/239 (36%), Gaps = 17/239 (7%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P+     ES+ +     +   P      I +          +   ++ E ++       C
Sbjct: 238 PDMLRDAESRVERMRAAAETSPAAGAVAISTRYRAAMPQTPEFPQTMVEARAAAGHCRRC 297

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150
            LC  +  T+     E  +LMI+G  P D +++ G+PF G  G++L + + +      Q 
Sbjct: 298 GLCEAATQTVWGEGPEDAELMIVGEQPGDREDLEGRPFVGPAGHLLREAMVAAGAEVRQT 357

Query: 151 HISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
            ++                ++N    E+  CR  +  ++  I P++++ +G        +
Sbjct: 358 WLTNAVKHFKFMPRGKRRLHQNPDRQEILHCRWWLGLELAFIRPRMVVALGASAAFALTD 417

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ------YPLIKKNTWHALITLKK 256
           N+A  T +  G+           P L + HP  +++          ++     +I   +
Sbjct: 418 NNAPLTSR-RGQ---AEIGLHGGPVLISWHPSYILRLNDSVARERARRELIEDIIQAAR 472


>gi|331696452|ref|YP_004332691.1| phage SPO1 DNA polymerase-like protein [Pseudonocardia
           dioxanivorans CB1190]
 gi|326951141|gb|AEA24838.1| phage SPO1 DNA polymerase-related protein [Pseudonocardia
           dioxanivorans CB1190]
          Length = 194

 Score =  132 bits (331), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 69/180 (38%), Gaps = 13/180 (7%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
            L  L+  +    DC L + +   +         LM++G  P D ++  G PF G  G +
Sbjct: 4   DLDALRDAVTRCTDCELHADATHAVFGAGPASAWLMLVGEQPGDREDREGAPFVGPAGRL 63

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPK 188
           LD  L+   + R +++++ +              ++  +   +  CR     ++ ++ P+
Sbjct: 64  LDTALERAGVDRDEVYVTNVVKHFRFEREGKRRLHKTPAVRHVRACRHWFDDELAVVGPR 123

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ-YPLIKKNT 247
           +++ +G          D  +  +  G+             + T+HP  +++  P  +   
Sbjct: 124 VVVTLGATAAKALVGPD-VRISEERGEVREWQ----GRSLVPTIHPSAILRGSPEARDAA 178


>gi|254168174|ref|ZP_04875021.1| uracil-DNA glycosylase, family 4, putative [Aciduliprofundum boonei
           T469]
 gi|197622940|gb|EDY35508.1| uracil-DNA glycosylase, family 4, putative [Aciduliprofundum boonei
           T469]
          Length = 252

 Score =  131 bits (330), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 74/177 (41%), Gaps = 4/177 (2%)

Query: 73  KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
           K   + EL   +R    C L +T  + +         LM+I   P + ++ +GK F G +
Sbjct: 6   KKKRMKELNEEIRKCERCKLYATRKNAVVGEGNLDAKLMLIAQAPGEKEDETGKMFVGPS 65

Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192
           G +LD++L+   + R +++++ +     P  R     E+  C   + ++IE+++P+IL+ 
Sbjct: 66  GKILDELLEIAGLKREEVYMTNLIKCFLPNCRKRREGEISACSYFLDKEIEIVNPEILVP 125

Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249
           +G     + F      T    GK          I      HP  L+     +K    
Sbjct: 126 LGYFATRYIFQKYNIDTSLIYGKL----IWTGEIKIYPLEHPSTLLYDESKRKILEE 178


>gi|260428590|ref|ZP_05782569.1| uracil-DNA glycosylase superfamily protein [Citreicella sp. SE45]
 gi|260423082|gb|EEX16333.1| uracil-DNA glycosylase superfamily protein [Citreicella sp. SE45]
          Length = 471

 Score =  131 bits (330), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 76/195 (38%), Gaps = 11/195 (5%)

Query: 54  TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113
             +  + +  + +    A+      +L + L +   C L   +   +         LMI+
Sbjct: 257 PTVAPLRAERIGERLRAARVPEPGDDLAAGLAACRRCPLWQNATQPVPGEGPLDAPLMIV 316

Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNL 166
           G  P D +++ G+PF G  G + D++     + R + +++                +++ 
Sbjct: 317 GEQPGDLEDLEGRPFVGPAGQLFDEVAARAGLDRARAYVTNAVKHFKFAARGKRRIHQSP 376

Query: 167 SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII 226
           +  E++ CR  +  +   + P+++L +G    +    +      +  G    +       
Sbjct: 377 TQGEIQHCRWWLDLERAQVKPRLILAMGATALDSLTGDRRGLLTRRGG----VEQTAEGT 432

Query: 227 PTLATVHPQELIQYP 241
           P L TVHP  L++ P
Sbjct: 433 PVLVTVHPSYLLRLP 447


>gi|148927323|ref|ZP_01810888.1| phage SPO1 DNA polymerase-related protein [candidate division TM7
           genomosp. GTL1]
 gi|147887279|gb|EDK72738.1| phage SPO1 DNA polymerase-related protein [candidate division TM7
           genomosp. GTL1]
          Length = 207

 Score =  131 bits (330), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 44/201 (21%), Positives = 86/201 (42%), Gaps = 3/201 (1%)

Query: 60  HSPLVQQADSIAQKACSLHELKSLLRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPS 118
                 +  S++ K   L ++++ + + + C  L  T+ + +         ++ IG  P 
Sbjct: 2   KQAPAAKDHSLSDKRALLDQIRTDILAANVCPHLAKTATNLVMGDGNLDAKIVFIGEAPG 61

Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPII 178
             ++  G PF G  G  LD+ML S  + R  ++I+ I  + PP NR+ S  E     P +
Sbjct: 62  KKEDEQGLPFVGAAGRFLDEMLASANLKREDVYITNIVKYRPPNNRDPSPEEKRAFWPYV 121

Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238
            RQ+++I P++++ +G  +  FF     QK     G    +      I  +   HP   +
Sbjct: 122 ARQLKVIGPEVIVTLGRHSMEFFL--PGQKISVVHGDPKRVTFGKEKIVVVPLFHPAAAL 179

Query: 239 QYPLIKKNTWHALITLKKALK 259
               +++        L K ++
Sbjct: 180 YNGGMRQTLIDDFSRLPKIVE 200


>gi|332799272|ref|YP_004460771.1| phage SPO1 DNA polymerase-like protein [Tepidanaerobacter sp. Re1]
 gi|332697007|gb|AEE91464.1| phage SPO1 DNA polymerase-related protein [Tepidanaerobacter sp.
           Re1]
          Length = 253

 Score =  131 bits (329), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 39/189 (20%), Positives = 75/189 (39%), Gaps = 13/189 (6%)

Query: 80  LKSLLRSFHDCHLC--STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
           +K  + +   C L         +         L++IG  P   ++  G+PF G+ G +L 
Sbjct: 63  IKEHINTCQSCLLYAQENHTHKVAGEGALNSPLVLIGEGPGFDEDKQGRPFVGRAGQLLT 122

Query: 138 KMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197
            +L  ++I R +++I+ +    PP NR     E++ C   +  ++ LI PK+++ +G   
Sbjct: 123 TILNKMDIRREKVYITNVIKCRPPQNRTPLQKEIKACSKNLELELSLIQPKVIIALGAVP 182

Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWHALI 252
            N+F         +  G+W N          + T HP  +++         K   W    
Sbjct: 183 LNYF--KSGSSIMRERGQWINS----RDYWIMPTFHPAYILRQHGKTLNKVKWLVWQDFN 236

Query: 253 TLKKALKNL 261
                 K +
Sbjct: 237 EAVAKAKEM 245


>gi|182415860|ref|YP_001820926.1| phage SPO1 DNA polymerase-related protein [Opitutus terrae PB90-1]
 gi|177843074|gb|ACB77326.1| phage SPO1 DNA polymerase-related protein [Opitutus terrae PB90-1]
          Length = 202

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 82/197 (41%), Gaps = 16/197 (8%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            +L ++++  R    C L  T   T+      G  ++++G  P D ++I+G+PF G  G 
Sbjct: 7   RTLEKVRAQARDCTRCPLYKTGTQTVFGEGRVGARMLMVGEQPGDQEDIAGRPFVGPAGQ 66

Query: 135 MLDKMLQSIEIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISP 187
           +L++ L+   I R ++ ++                ++  +  E+  CRP +  ++EL+ P
Sbjct: 67  LLNRALEEAGIDRDEVFVTNAVKHFKWVRAGKRRLHKKPNAAEINACRPWLEAELELVQP 126

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247
            +++ +G             +  Q  G+             LAT+HP  +++ P   ++ 
Sbjct: 127 DLIVALGATAAQTLMG-RQFRVTQQHGQVLAAPCAKG---FLATIHPSAVLRTPPPDRDA 182

Query: 248 -----WHALITLKKALK 259
                   L    + LK
Sbjct: 183 AYAGLVSDLKAAVRFLK 199


>gi|152965489|ref|YP_001361273.1| phage SPO1 DNA polymerase-related protein [Kineococcus
           radiotolerans SRS30216]
 gi|151360006|gb|ABS03009.1| phage SPO1 DNA polymerase-related protein [Kineococcus
           radiotolerans SRS30216]
          Length = 229

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 74/228 (32%), Gaps = 15/228 (6%)

Query: 45  SIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQ 104
            +      I  +    +     A         L +L+        C L   +   + +  
Sbjct: 2   PVSRPPDSIGGVTPASTQSRPGAAQWVPPGADLEQLRRAAPDCRGCELWEPATQVVFSAG 61

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP-WHPPGN 163
                ++++G  P D ++  G PF G  G +L K +    I     +++     +     
Sbjct: 62  APDARMVLVGEQPGDQEDRRGVPFVGPAGRLLQKAVAEAGIDLATTYVTNAVKHFRFTQE 121

Query: 164 RNLSNIEME--------ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK 215
                             CRP +  ++  + P++++ +G             +  ++ G+
Sbjct: 122 APGKRRIHASPDVAHVTACRPWLAAELVQVDPEVVVCLGATAAKALL-PKDFRVTKHRGQ 180

Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLIKKNT-----WHALITLKKAL 258
              L T       L T+HP  +++ P  +++         L T   AL
Sbjct: 181 LFTLPTSLGEKRFLGTIHPSAVLRTPEAERDAAYAALVADLRTAATAL 228


>gi|85708488|ref|ZP_01039554.1| Uracil-DNA glycosylase:Phage SPO1 DNA polymerase-related protein
           [Erythrobacter sp. NAP1]
 gi|85690022|gb|EAQ30025.1| Uracil-DNA glycosylase:Phage SPO1 DNA polymerase-related protein
           [Erythrobacter sp. NAP1]
          Length = 478

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 78/232 (33%), Gaps = 17/232 (7%)

Query: 42  KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTIC 101
            E  +   +      R        +   +     SL  ++  + +  DC +       I 
Sbjct: 250 PEAELIPDLIAGAQAREAGMVAAGE-REVKTIPESLAAVEQGIAACRDCPIADCGTRAIM 308

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
                   LMI+G  P D ++  G+PF G  G +LD+ L    I R+  +++        
Sbjct: 309 GEGAADAPLMIVGEQPGDQEDQQGRPFVGPAGQLLDQCLDHAGIDRSTAYVTNAVKHFKF 368

Query: 162 G-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLG 214
                   ++  +  E++ CR  +  +  L+ P+++L +G                +  G
Sbjct: 369 KWKGKRRIHQTPTAKEVDTCRWWLEAERSLVKPRVVLALGASAARGLLGRTVSV-GKERG 427

Query: 215 KWSNLCTPHSIIPTLATVHPQELIQ-----YPLIKKNTWHALITLKKALKNL 261
           +   L           TVHP  L++          +     L  ++  L  L
Sbjct: 428 RPIPLEDGSE---LWVTVHPSYLLRLEGEACDEQGQLFARDLAAVRARLAEL 476


>gi|113866662|ref|YP_725151.1| Uracil-DNA glycosylase [Ralstonia eutropha H16]
 gi|113525438|emb|CAJ91783.1| Uracil-DNA glycosylase [Ralstonia eutropha H16]
          Length = 234

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 77/227 (33%), Gaps = 23/227 (10%)

Query: 28  FDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSF 87
              P    T +++R +   D      T+        + +   +          +  L   
Sbjct: 1   MRHPRPWPTLKNRRPKLPPDE-----TDSSTARRAPMPEHRKLPVS-------RDELNQC 48

Query: 88  HDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR 147
             C L   +   +         +M++G  P   +++ G PF G  G++LD+ L S  + R
Sbjct: 49  RRCPLWRNATQGVPGAGAAHARIMLVGEQPGAQEDLQGSPFVGPAGHLLDEALASAGLDR 108

Query: 148 TQIHISMISP-----WHPPGNRNLSN--IEMEICRPIIMRQIELISPKILLFIGNKTKNF 200
            ++ ++         W      + S    E+E C   + R++E + P++++ +G      
Sbjct: 109 DKLFMTNAVKHFKFEWRGKRRLHKSPAQQEIEACSLWLERELEKVGPRVVVALGATAARA 168

Query: 201 FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247
                +      +         H     +AT HP   ++    +   
Sbjct: 169 VLGRKSVSLAGMM----ETPVEHEGRLVIATYHPSFALRQRTDEARA 211


>gi|149184846|ref|ZP_01863164.1| Uracil-DNA glycosylase:Phage SPO1 DNA polymerase-related protein
           [Erythrobacter sp. SD-21]
 gi|148832166|gb|EDL50599.1| Uracil-DNA glycosylase:Phage SPO1 DNA polymerase-related protein
           [Erythrobacter sp. SD-21]
          Length = 478

 Score =  131 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 75/207 (36%), Gaps = 16/207 (7%)

Query: 67  ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126
           A    ++  +L  +   +     C +       +     +   LMI+G  P D ++ +G+
Sbjct: 275 ALEFEERPDTLAAIDKAIHGCRKCPIGQLDNHAVMGEGPQDAALMIVGEQPGDQEDQTGR 334

Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIM 179
           PF G  G +LD  L+ + I R   +++                ++N    E++ CR  I 
Sbjct: 335 PFVGPAGQLLDAHLEKVGIDRRAAYVTNAVKHFKYVQRGKRRLHQNPGAKEIDTCRWWIE 394

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
            + E++ PK++L +G                +  G    L           T HP  L++
Sbjct: 395 SEREIVKPKLVLAMGASAARSVLG-KTVSISRVRGAPIALENGSE---LWVTAHPSYLLR 450

Query: 240 -----YPLIKKNTWHALITLKKALKNL 261
                     +     L  +++ L+ L
Sbjct: 451 LEGPAREEQARLFDADLAAVRQRLEEL 477


>gi|295690482|ref|YP_003594175.1| phage SPO1 DNA polymerase-like protein [Caulobacter segnis ATCC
           21756]
 gi|295432385|gb|ADG11557.1| phage SPO1 DNA polymerase-related protein [Caulobacter segnis ATCC
           21756]
          Length = 475

 Score =  131 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 80/244 (32%), Gaps = 18/244 (7%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P   AT + +           P   +        ++A        +  E+++ ++    C
Sbjct: 236 PELIATAQDRAAAMVAAPTRAPSDRVLKAALRHAREASYGQGAPTTSEEVEAGVQVCRRC 295

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150
            L   +   +         LM +G  P D ++++G+PF G  G + DK L    + R Q 
Sbjct: 296 DLWRDATQGVPGEGPRPAPLMFVGEQPGDQEDLAGRPFVGPAGQVFDKALAEAGVSRDQA 355

Query: 151 HISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
            ++                ++     E+  CR  +  +  ++ P++++ +G         
Sbjct: 356 FVTNAVKHFKHEVRGKRRIHQTPDRGEVTACRWWLDAERRIVRPRVIVMLGATAALGVVG 415

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI--KKNTW----HALITLKKA 257
                   N GK   L         + T HP  L++ P    K   +      L      
Sbjct: 416 -KPTPIGANRGKALQLPDQAQG---VVTYHPSFLLRVPDADTKAKAYAEFVEDLRM-AGK 470

Query: 258 LKNL 261
           L  L
Sbjct: 471 LAGL 474


>gi|77164595|ref|YP_343120.1| Phage SPO1 DNA polymerase-related protein [Nitrosococcus oceani
           ATCC 19707]
 gi|254433152|ref|ZP_05046660.1| uracil-DNA glycosylase, family 4 [Nitrosococcus oceani AFC27]
 gi|76882909|gb|ABA57590.1| Phage SPO1 DNA polymerase-related protein [Nitrosococcus oceani
           ATCC 19707]
 gi|207089485|gb|EDZ66756.1| uracil-DNA glycosylase, family 4 [Nitrosococcus oceani AFC27]
          Length = 189

 Score =  131 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 6/193 (3%)

Query: 68  DSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127
           D   +KA +L ELK          +       +        ++MIIG  P   +  +G+P
Sbjct: 2   DDFLEKAVTLQELKWHCERSLGPEVPKGEK-LVFGEGPSPAEIMIIGEAPGVQEAKTGRP 60

Query: 128 FSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP 187
           F G +G +L ++L  I + R  ++IS I   HPPGNR     E++   P ++RQIEL+ P
Sbjct: 61  FVGSSGKLLTQLLHQIGLKREHVYISNILKTHPPGNRKPYRSEIKRELPFLLRQIELLQP 120

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247
           ++L+ +G        +  A K     G+W  +      +PT  T HP   ++    K   
Sbjct: 121 QLLILLGATALQALLDPKA-KITALRGQWVEV----KKLPTFVTYHPAAALRDETKKTAL 175

Query: 248 WHALITLKKALKN 260
                 L++ L++
Sbjct: 176 EQDFAVLQRHLES 188


>gi|156743997|ref|YP_001434126.1| phage SPO1 DNA polymerase-like protein [Roseiflexus castenholzii
           DSM 13941]
 gi|156235325|gb|ABU60108.1| phage SPO1 DNA polymerase-related protein [Roseiflexus castenholzii
           DSM 13941]
          Length = 212

 Score =  131 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 75/188 (39%), Gaps = 6/188 (3%)

Query: 73  KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
            A  L ++   +R+   C L  +++  +         +M IG  P   ++  G+PF G  
Sbjct: 3   AANMLQQIADEVRACTACRLHQSAMRAVPGEGPADAKVMFIGEAPGFHEDRQGRPFVGAA 62

Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192
           G  L+++L    + R+++ I+ +    PP NR+    E+  C   + RQI  ++P +++ 
Sbjct: 63  GQFLEELLGLAGLRRSEVFIANVIKHRPPDNRDPLPDEIAACSQFLERQIAALNPLVIVT 122

Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
           +G  +   +F  +         +W            +  +HP   +  P  +        
Sbjct: 123 LGRFSMARWFPGEKISRIHGQPRWIE------GRMIIPMMHPAAALHQPQYRALIEDDFR 176

Query: 253 TLKKALKN 260
            L + +  
Sbjct: 177 RLPEFIAQ 184


>gi|58038622|ref|YP_190586.1| DNA polymerase related protein [Gluconobacter oxydans 621H]
 gi|58001036|gb|AAW59930.1| DNA polymerase related protein [Gluconobacter oxydans 621H]
          Length = 421

 Score =  131 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 81/241 (33%), Gaps = 18/241 (7%)

Query: 33  NEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSI-AQKACSLHELKSLLRSFHDCH 91
           + A            +            +P+    D+     + SL  L+        C 
Sbjct: 184 DSADPAEVVAAARNIATAGAGNEWWEGIAPVRLHPDAADIASSPSLASLRGKAIDCRMCD 243

Query: 92  LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH 151
           LC+ +  T+         ++ +G  P D +++ G+PF G  G + D+ L+     R Q  
Sbjct: 244 LCAPATRTVSGEGNPEARIIFVGEQPGDQEDLQGRPFVGPAGQLFDRALKEAGGNRAQAW 303

Query: 152 ISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204
           I+                ++     E+  C P +  + ++++PK+ + +G    +     
Sbjct: 304 ITNAVKHFKFVPRGNRRIHQKPDAAEITACSPWLATERKVLAPKVTVMLGVTGASAVLGR 363

Query: 205 DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH------ALITLKKAL 258
                  +  +   +      I  L TVHP  L++ P  +  T         L     AL
Sbjct: 364 QVTV---SRERSRPIPLADGSI-GLVTVHPSYLLRLPDEESKTREYTKFVTDLRMAISAL 419

Query: 259 K 259
            
Sbjct: 420 A 420


>gi|186474189|ref|YP_001861531.1| phage SPO1 DNA polymerase-related protein [Burkholderia phymatum
           STM815]
 gi|184196521|gb|ACC74485.1| phage SPO1 DNA polymerase-related protein [Burkholderia phymatum
           STM815]
          Length = 244

 Score =  131 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 79/224 (35%), Gaps = 18/224 (8%)

Query: 27  VFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRS 86
           +   P  +    +++             + +   +          Q+   L E       
Sbjct: 1   MQRAPPTDDAMSTRKTSPRSPGKTGEADDGKTKPAAKDSPLVEPHQQPARLAE------- 53

Query: 87  FHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM 146
              C L S +   +  T  +   +M++G  P D +++ G PF G  G +LD  L+   + 
Sbjct: 54  CRRCALWSRATQAVGGTGPKHAPIMMVGEQPGDKEDLQGMPFVGPAGELLDDALKDAGVD 113

Query: 147 RTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199
           R  ++++                ++  +  E++ C   + R++  + P++L+ +G     
Sbjct: 114 RRDVYVTNAVKHFKWEPRGKRRMHKTPAQREVDACHYWLERELASVGPRVLVALGATALK 173

Query: 200 FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI 243
              ++   +    +GK       H     + T HP   ++ P  
Sbjct: 174 AILDDRDARLQAVVGKVLE----HGGRHVVPTYHPSFALRAPDE 213


>gi|124023137|ref|YP_001017444.1| uracil-DNA glycosylase [Prochlorococcus marinus str. MIT 9303]
 gi|123963423|gb|ABM78179.1| Uracil-DNA glycosylase [Prochlorococcus marinus str. MIT 9303]
          Length = 183

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 76/183 (41%), Gaps = 11/183 (6%)

Query: 85  RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIE 144
                C +       + +       LM+IG  P   ++  GKPF G++G +LD++++S+ 
Sbjct: 5   NGCGACVMPVQQAQVVVSRGNPQACLMVIGEAPGAREDELGKPFVGRSGQLLDRLMESVG 64

Query: 145 IMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
           +      +I  +    PP NR  +  E+   RP + +QIEL+ P ++   G+        
Sbjct: 65  LDPVVDAYICNVVKCRPPKNRRPTLAEIASYRPWLEQQIELVDPYVIALAGSTAVEAILG 124

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL-----IKKNTWHALITLKKAL 258
                  +  G+W +          +  +HP  L++ P          T   L++++  L
Sbjct: 125 FKG-GITKLRGQWQHW----HGRLLMPLLHPAYLLRNPSPVDGAPIALTRGDLMSIRHRL 179

Query: 259 KNL 261
            N+
Sbjct: 180 SNV 182


>gi|323141535|ref|ZP_08076421.1| putative uracil-DNA glycosylase A [Phascolarctobacterium sp. YIT
           12067]
 gi|322413994|gb|EFY04827.1| putative uracil-DNA glycosylase A [Phascolarctobacterium sp. YIT
           12067]
          Length = 217

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 75/170 (44%), Gaps = 5/170 (2%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
            ++  L EL+  L +   C L   +++ +         ++ +G  P   ++  G P  G 
Sbjct: 3   DESMDLSELEGELANCQACPLRQDAIAPVSWYGNPESPIVFVGEGPGQVEDDYGCPLIGP 62

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC-RPIIMRQIELISPKIL 190
           +G +LDK L + ++ R ++  + +    P  NR     E + C +  + R++E+I PK++
Sbjct: 63  SGQLLDKALWAAKMTRDRVLTTNVIKCRPKNNRTPDIAEADFCAKQWLQRELEIIQPKVI 122

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
           + +G+   +        +  ++ G W            +AT HP  L++ 
Sbjct: 123 VALGSVALHC-LGRPDMRITRDRGMWFRTE---QGFDCIATYHPAYLLRQ 168


>gi|269926975|ref|YP_003323598.1| phage SPO1 DNA polymerase-related protein [Thermobaculum terrenum
           ATCC BAA-798]
 gi|269790635|gb|ACZ42776.1| phage SPO1 DNA polymerase-related protein [Thermobaculum terrenum
           ATCC BAA-798]
          Length = 201

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 16/198 (8%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
            L ++   L+S   C L   S + I        +LMIIG +PS+ D  +GKPFSG +G +
Sbjct: 6   DLQQIAQDLQSCQRCDLYLYSRTAIPGNGDSQANLMIIGESPSEYDESTGKPFSGPSGRV 65

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPK 188
           LD  L+ + + R ++ ++ +              NR     E + C   +  +I +I PK
Sbjct: 66  LDSWLRKLGLTREEVWLTNVVKHRSVDLKDPRRRNRAPIASEYKACSHWLRLEISIIRPK 125

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL--IQYPLIKK- 245
           I++ +G             K  ++ GK      P+  I  + T H   +  ++ PL+++ 
Sbjct: 126 IIVALGASAGKALLG-SGFKISRDRGK--TFPGPYDSI-VVPTYHTAYILKLKSPLLEQV 181

Query: 246 --NTWHALITLKKALKNL 261
                  L T+K+ L  L
Sbjct: 182 SSQVEQDLDTIKRLLSQL 199


>gi|218462023|ref|ZP_03502114.1| probable DNA-directed DNA polymerase protein (uracil-DNA
           glycosylase) [Rhizobium etli Kim 5]
          Length = 155

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/151 (39%), Positives = 92/151 (60%), Gaps = 1/151 (0%)

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170
           M+IG  PS  D+  G PFSGK+G + DKML +I + R+ + ++ + PW PPGNR  S  E
Sbjct: 1   MVIGSAPSAEDDREGLPFSGKSGQLFDKMLAAIGLDRSSVLLTQVIPWRPPGNRAASAAE 60

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230
           ++ICRP I RQI L  P+++L +GN    FFF  +        G+W ++      IP +A
Sbjct: 61  IDICRPFIERQIALAEPQVILLLGNFAARFFFGENDTIHG-LRGRWKDIVIADRAIPAIA 119

Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALKNL 261
           ++HPQ+L+  P+ K+  W+ L+  +  LK+L
Sbjct: 120 SLHPQDLLTAPVNKRLAWNDLLAFQAKLKSL 150


>gi|90420004|ref|ZP_01227913.1| uracil-DNA glycosylase [Aurantimonas manganoxydans SI85-9A1]
 gi|90336045|gb|EAS49793.1| uracil-DNA glycosylase [Aurantimonas manganoxydans SI85-9A1]
          Length = 487

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 92/262 (35%), Gaps = 22/262 (8%)

Query: 17  LFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIA----Q 72
            ++A+        +P       + R+       +  + + R     + ++ D +A     
Sbjct: 229 KYWANM-PETALIKPLIAGAEAASRRMIETAPTLPSLRHERQKERDMAREPDLMARTSDA 287

Query: 73  KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
           +  S+   +        C L   +  T+     E   ++ +G  P D ++I+G+PF G  
Sbjct: 288 RPTSIAAAREAASHCRACPLWEPATQTVFGRGPEDAPVIFVGEQPGDQEDIAGEPFIGPA 347

Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELI 185
           G + D  L    I R++ +++                +   +  E+  CR  +  + ELI
Sbjct: 348 GKVFDAALGEAGIDRSRAYVTNAVKHFKFAPRGKRRIHAKPNGGEVRACRWWLDIERELI 407

Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-- 243
            PK+++ +G    +                  +L         L TVHP  +++ P    
Sbjct: 408 RPKLIVALGATAASAVLG-KTVTIRDARSTLIDL---DEGTRALVTVHPSYILRLPDKVT 463

Query: 244 ----KKNTWHALITLKKALKNL 261
               ++     +  + + +  L
Sbjct: 464 QDRERRAFHADMALVLQTVPEL 485


>gi|119387332|ref|YP_918366.1| uracil-DNA glycosylase superfamily protein [Paracoccus
           denitrificans PD1222]
 gi|119377907|gb|ABL72670.1| Uracil-DNA glycosylase superfamily [Paracoccus denitrificans
           PD1222]
          Length = 479

 Score =  129 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 83/223 (37%), Gaps = 11/223 (4%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P   A  E++ +      A  P      + +          +   +L + +        C
Sbjct: 237 PAMLADAEARVERMRAAGASIPRPGAGPVSTRYRNAMPQAVEPPATLDQARQAALQCRRC 296

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150
            LC  +  T+         +MI+G  P D ++++G+PF+G  G +L  M+    +   QI
Sbjct: 297 KLCEAATQTVWGEGAADAAVMIVGEQPGDHEDLTGRPFAGPAGQLLRGMIADAGLDGAQI 356

Query: 151 HISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
            ++                +RN +  E+  CR  +  ++  + P++ L +G         
Sbjct: 357 WLTNAVKHFKFAPRGKRRLHRNPARDEIRHCRWWLGLELAFVRPRVTLALGASAAFA-LT 415

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKN 246
           +D +  ++  G      T     P L + HP  +++ P   + 
Sbjct: 416 DDDRPMHRRRGTV---ETGLHGGPVLISWHPAHILRLPDPDRR 455


>gi|312602706|ref|YP_004022551.1| uracil DNA glycosylase superfamily protein [Burkholderia
           rhizoxinica HKI 454]
 gi|312170020|emb|CBW77032.1| Uracil DNA glycosylase superfamily protein [Burkholderia
           rhizoxinica HKI 454]
          Length = 274

 Score =  129 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 63/167 (37%), Gaps = 11/167 (6%)

Query: 84  LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143
           L     C L   +   +         +M++G  P D ++  G+PF G  G +LD  L+  
Sbjct: 84  LDDCRRCALWHDASQPVPGEGPAHAPIMMVGEQPGDQEDRQGRPFVGPAGVLLDDALREA 143

Query: 144 EIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            + R  ++++                ++  +  E+E C   + R+ + ++P +++ +G  
Sbjct: 144 GVARDDVYVTNAVKHFKWEPRGKRRMHKTPAQREIEACHYWLDREFDTVAPAVVVALGAT 203

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI 243
                  +      ++LG+             + T HP   ++ P  
Sbjct: 204 ALKAVLQDRTVTLQRSLGQTIEY----GGHFVIPTYHPSFALRAPDE 246


>gi|85373904|ref|YP_457966.1| Uracil-DNA glycosylase:Phage SPO1 DNA polymerase-related protein
           [Erythrobacter litoralis HTCC2594]
 gi|84786987|gb|ABC63169.1| Uracil-DNA glycosylase:Phage SPO1 DNA polymerase-related protein
           [Erythrobacter litoralis HTCC2594]
          Length = 476

 Score =  129 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 76/207 (36%), Gaps = 16/207 (7%)

Query: 67  ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126
           +  +  +  +L  +   + +   C +       +     +   LMI+G  P D ++ +G+
Sbjct: 273 SRELEDRPETLEAIDRAIHACRQCPIGELDNQAVMGEGPQAAALMIVGEQPGDQEDKAGR 332

Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIM 179
           PF G  G +LD+ L+   I R   +++                +++ +  E++ CR  I 
Sbjct: 333 PFVGPAGQLLDRHLEKAGIERRGAYVTNTVKHFKFAQRGKRRLHQSPTAKEIDTCRWWIE 392

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
            +  L+ PKI+L +G                +  G+   L           T HP  L++
Sbjct: 393 SERALVKPKIVLALGASAARGMLG-KTVSISKVRGEPIALEDGSE---LWVTAHPSYLLR 448

Query: 240 -----YPLIKKNTWHALITLKKALKNL 261
                     K     L  +K+ L  L
Sbjct: 449 LDGEAAEKQAKLFDADLAAVKERLGEL 475


>gi|76800697|ref|YP_325705.1| uracil-DNA glycosylase-like protein [Natronomonas pharaonis DSM
           2160]
 gi|76556562|emb|CAI48133.1| uracil-DNA glycosylase homolog [Natronomonas pharaonis DSM 2160]
          Length = 194

 Score =  129 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 71/165 (43%), Gaps = 2/165 (1%)

Query: 84  LRSFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142
           +     C  LC++    +        DL+ +G  P ++++  G+PF G++G++LD+ L+ 
Sbjct: 7   VTDCRRCSELCASRSRIVNGVGPTDADLLFVGEAPGETEDEVGEPFVGRSGDVLDEGLRD 66

Query: 143 IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202
             + R  I I+      PP NR+ +  E   CRP +  +I  + P +++ +G        
Sbjct: 67  RGLSRRDIRITNCVRCRPPDNRDPTAEERSNCRPYLDAEIAAVDPDVVVALGKVPAEHLL 126

Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247
           +  +    +  G   +     +    L  VHP   +  P  ++  
Sbjct: 127 D-RSVAVTEAAGAIYDARIDGTARRVLVCVHPAATLYDPSQREQF 170


>gi|16126572|ref|NP_421136.1| phage SPO1 DNA polymerase-like protein [Caulobacter crescentus
           CB15]
 gi|221235354|ref|YP_002517791.1| uracil DNA glycosylase superfamily protein [Caulobacter crescentus
           NA1000]
 gi|13423858|gb|AAK24304.1| phage SPO1 DNA polymerase-related protein [Caulobacter crescentus
           CB15]
 gi|220964527|gb|ACL95883.1| uracil DNA glycosylase superfamily protein [Caulobacter crescentus
           NA1000]
          Length = 479

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 80/248 (32%), Gaps = 24/248 (9%)

Query: 27  VFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRS 86
           + +   + A        +       P   +        + A   A    +L  +++ +  
Sbjct: 238 LIEAAQDRAAAMVTTPPRP------PSERVLKAAQRHARDAPYNAGAPTTLDAVRAGVSV 291

Query: 87  FHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM 146
              C L   +   +         LM +G  P D ++++G P  G  G + D+ L  + + 
Sbjct: 292 CRRCDLWREATQGVPGDGAPSAPLMFVGEQPGDQEDLAGSPLVGPAGQIFDRALAEVSVR 351

Query: 147 RTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199
           R Q +++                ++  +  E+  CR  +  +  L+ P +++ +G     
Sbjct: 352 REQTYVTNAVKHFKHELNGKRRLHKTPTQGEVSACRWWLDAERRLVRPTVIVMLGATAAF 411

Query: 200 FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK------KNTWHALIT 253
                      +  G+   L         L T HP  L++ P         ++    L  
Sbjct: 412 GVMG-RPTPVRETRGRPLPLPDGVQG---LVTFHPSYLLRLPDAAARENAYRSFVDDLR- 466

Query: 254 LKKALKNL 261
           L   L  L
Sbjct: 467 LAGRLAGL 474


>gi|111020972|ref|YP_703944.1| DNA polymerase [Rhodococcus jostii RHA1]
 gi|110820502|gb|ABG95786.1| possible DNA polymerase [Rhodococcus jostii RHA1]
          Length = 216

 Score =  129 bits (324), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 72/199 (36%), Gaps = 13/199 (6%)

Query: 60  HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSD 119
                  A         L  L       H C L   +  T+         +M++G  P D
Sbjct: 2   SRATKPSAAPFVPDTDDLEALSHAADGCHGCDLYRDAEQTVFGAGRRSARMMLVGEQPGD 61

Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH---------PPGNRNLSNIE 170
            ++ +G+PF G  G +L+K L +  I R   +++                  ++  +  E
Sbjct: 62  QEDRAGEPFVGPAGKLLNKALDAAGINRDLTYVTNAVKHFKFVPAERGTRRIHKKPNRTE 121

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP---HSIIP 227
           +  CRP ++ ++  + P +L+ +G            + T    G+  +L           
Sbjct: 122 IVACRPWLIAELAAVQPDVLVCLGATAAQALLGPSFRLTEH-RGELLHLDGEVDVDMDPD 180

Query: 228 TLATVHPQELIQYPLIKKN 246
             AT+HP  +++ P   ++
Sbjct: 181 VFATIHPSAVLRGPSDDRD 199


>gi|312897619|ref|ZP_07757036.1| uracil-DNA glycosylase, family 4 [Megasphaera micronuciformis
           F0359]
 gi|310621252|gb|EFQ04795.1| uracil-DNA glycosylase, family 4 [Megasphaera micronuciformis
           F0359]
          Length = 216

 Score =  129 bits (324), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 12/183 (6%)

Query: 82  SLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML 140
           + L     CHLC   +      +  E   LM +G  P   ++  G P  G +G +LDK L
Sbjct: 8   AALTDCTACHLCREGNRGPTQWSGPEDSPLMFVGEGPGGVEDEYGVPLVGPSGKLLDKAL 67

Query: 141 QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP-IIMRQIELISPKILLFIGNKTKN 199
            S+ + R +I+++ I    P  NR  +  E   C    +  +IE + P +++ +G     
Sbjct: 68  WSVGLTRDRIYVTNIVKCRPHNNRTPTLDEGRFCADLHLRAEIEAVKPAVIVCLGKVAFQ 127

Query: 200 FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-----KKNTWHALITL 254
           +F+ +      +N GKW +       IP + T HP  L++         K   ++ L + 
Sbjct: 128 YFYGSAGSIM-RNRGKWLDYE----KIPVMPTYHPAFLLRQTGKELVESKWQVYYDLKSA 182

Query: 255 KKA 257
            + 
Sbjct: 183 VEK 185


>gi|254167986|ref|ZP_04874834.1| uracil-DNA glycosylase, family 4, putative [Aciduliprofundum boonei
           T469]
 gi|289595947|ref|YP_003482643.1| phage SPO1 DNA polymerase-related protein [Aciduliprofundum boonei
           T469]
 gi|197623029|gb|EDY35596.1| uracil-DNA glycosylase, family 4, putative [Aciduliprofundum boonei
           T469]
 gi|289533734|gb|ADD08081.1| phage SPO1 DNA polymerase-related protein [Aciduliprofundum boonei
           T469]
          Length = 249

 Score =  129 bits (323), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 75/182 (41%), Gaps = 4/182 (2%)

Query: 73  KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
           K   + EL   +R    C L +T  + +         LM+I   P + ++ +GK F G +
Sbjct: 3   KKERMKELNEEIRKCERCKLYATRKNAVVGEGNLDAKLMLIAQAPGEKEDETGKMFVGPS 62

Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192
           G +LD++L+   + R +++++ +     P  R     E+  C   + ++IE+++P+IL+ 
Sbjct: 63  GKILDELLEIAGLKREEVYMTNLIKCFLPNYRKPKEGEISACSYFLDKEIEIVNPEILVP 122

Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
           +G     + F      +    GK          I      HP  L+     ++       
Sbjct: 123 LGYFATRYIFQKYNVNSPPIYGKL----IWTGEIKIYPLEHPSTLLYDDSKREILEEHYR 178

Query: 253 TL 254
            L
Sbjct: 179 KL 180


>gi|257055335|ref|YP_003133167.1| uracil-DNA glycosylase, family 4 [Saccharomonospora viridis DSM
           43017]
 gi|256585207|gb|ACU96340.1| uracil-DNA glycosylase, family 4 [Saccharomonospora viridis DSM
           43017]
          Length = 211

 Score =  128 bits (322), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 83/206 (40%), Gaps = 15/206 (7%)

Query: 67  ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126
           A+    +  ++  L+        C L + +  T+     +   L+++G  P D ++  G+
Sbjct: 7   AEHYLPRERAVTSLRQAAAGCRGCDLFTDATQTVFGEGADRARLVLVGEMPGDREDREGR 66

Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPW---------HPPGNRNLSNIEMEICRPI 177
           PF G +GN+LD+ L    I R  ++++                  ++  +  ++  C+P 
Sbjct: 67  PFVGPSGNLLDRALGEAGIDRDTVYVTNAVKHFRFTREGNRRRRLHKKPTRSQITACKPW 126

Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237
           ++ +++ + P ++  +G       F+ D + +    G+   L         +ATVHP  +
Sbjct: 127 LLAELDAVRPDVVGLLGATAAQALFDADFRVSAH-RGEVLKLPGLDDPPLAVATVHPSAV 185

Query: 238 IQYPLIKK-----NTWHALITLKKAL 258
           ++     +          L  +  AL
Sbjct: 186 LRARDSDRERAYAEFVADLRVVAAAL 211


>gi|330994445|ref|ZP_08318370.1| DNA polymerase [Gluconacetobacter sp. SXCC-1]
 gi|329758445|gb|EGG74964.1| DNA polymerase [Gluconacetobacter sp. SXCC-1]
          Length = 415

 Score =  128 bits (321), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 73/226 (32%), Gaps = 17/226 (7%)

Query: 46  IDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQT 105
               ++P+         L    D    +  SL       R+   C +   +  T+     
Sbjct: 189 PADPLRPLALNTLPPPALPLVTDLDIGQITSLRAAYLAARTCLICPMARHATQTVFGEGE 248

Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH------ 159
               +M +G  P D ++ +G+PF G  G + D+ L    I R   +++            
Sbjct: 249 PTARMMFVGEQPGDREDQAGRPFVGPAGQLFDRALAEAGIDRADAYVTNTVKHFKFIRRG 308

Query: 160 -PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218
               +      E+  C P +  +  +I P++L+ +G    +      +        +   
Sbjct: 309 TRRIHEKAGREEIAACAPWLAAERRIIRPRVLVMLGATAASALLG-RSVTIGHERSRPIP 367

Query: 219 LCTPHSIIPTLATVHPQELIQYPLIKKNTWH------ALITLKKAL 258
           +    +    + TVHP  L++ P     T         L      L
Sbjct: 368 MEDGSTG---VVTVHPSYLLRLPDADARTREYDRFVADLRLAASHL 410


>gi|294496120|ref|YP_003542613.1| phage SPO1 DNA polymerase-related protein [Methanohalophilus mahii
           DSM 5219]
 gi|292667119|gb|ADE36968.1| phage SPO1 DNA polymerase-related protein [Methanohalophilus mahii
           DSM 5219]
          Length = 178

 Score =  128 bits (321), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 38/173 (21%), Positives = 76/173 (43%), Gaps = 12/173 (6%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            S  +L+  + S   C L  +++  +     +   ++ IG  P   ++ SG PF G+ G 
Sbjct: 3   DSFEDLEEEINSCTACQLHDSAIHKVIMKGGQNPKVLFIGEAPGKKEDASGIPFCGRAGK 62

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           +LD M++ +++ ++   +       PP NR     E+  CR    +QIE++ P +++ +G
Sbjct: 63  ILDGMIEDMDLQQSDWAVINTVKCRPPNNRRPRKEELAACRAFFEQQIEMLEPDVIILLG 122

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI----QYPLI 243
           N  +  F  N   +     G+  ++   +     +   HP  LI    + P  
Sbjct: 123 NTAEEAFLGNRQLQW----GECRDIDGKN----VVKFYHPAALIYTKSRQPEQ 167


>gi|83954916|ref|ZP_00963594.1| putative uracil-DNA glycosylase [Sulfitobacter sp. NAS-14.1]
 gi|83840642|gb|EAP79814.1| putative uracil-DNA glycosylase [Sulfitobacter sp. NAS-14.1]
          Length = 473

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 69/179 (38%), Gaps = 13/179 (7%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
             L   + +   C L   +   +        +LMI+G  P D +++SG+PF G  G + D
Sbjct: 283 DALAKDIAACARCPLHCNATQAVPGEGPMDAELMIVGEQPGDQEDLSGRPFIGPAGQLFD 342

Query: 138 KMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKIL 190
           ++     + R +  ++                ++  +  E++ CR  +  +I  + PK++
Sbjct: 343 QIAGRAGLARDKAFVTNAVKHFKFTPRGKRRLHQRPNASEVQHCRWWLDAEIAQVKPKLI 402

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKKNT 247
           L +G              T +  G         S  P L T+HP  L++   P  K + 
Sbjct: 403 LGMGATAAEGLTGRRDAITAR-RGTV---EQSPSGTPVLLTLHPSYLLRLPDPQAKADA 457


>gi|332185098|ref|ZP_08386847.1| hypothetical protein SUS17_137 [Sphingomonas sp. S17]
 gi|332014822|gb|EGI56878.1| hypothetical protein SUS17_137 [Sphingomonas sp. S17]
          Length = 258

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 52/262 (19%), Positives = 95/262 (36%), Gaps = 21/262 (8%)

Query: 6   ILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQ 65
            L      ++  ++ D+GV  + ++   +   E  R       +        H  +P++ 
Sbjct: 11  PLDSALAASLLEWWHDAGVDLLVEDEPRDWMAEPIRPVSFAPPSAPQSPAAPHPLAPILT 70

Query: 66  QADSIAQKACSLHE-----LKSLL--RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPS 118
            A   AQ   +L       L       S+    L +T              LM++   P 
Sbjct: 71  PA--AAQLPDTLTAFLEWRLSDAAPEASWDGISLTAT--------GPADATLMVLVDCPD 120

Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPII 178
             D  +G+  SG  G + D+ML +I   R  +H++ +    P   R  +++E  +     
Sbjct: 121 RDDGEAGQILSGAPGRLFDRMLAAIGQSRETVHLASVCARRPLAGRTPADLESRLAEI-A 179

Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238
              + LI P+ LL +GN         +        G    +   +     +A+ HP+ LI
Sbjct: 180 RHHVGLIRPRGLLLLGNAASRAVLGTEL---TSARGHLHAVDHKNGKSQAVASFHPRFLI 236

Query: 239 QYPLIKKNTWHALITLKKALKN 260
           + P+ K  +W  L  L   L  
Sbjct: 237 EKPMAKAESWKDLQLLMGDLAE 258


>gi|296268510|ref|YP_003651142.1| phage SPO1 DNA polymerase-related protein [Thermobispora bispora
           DSM 43833]
 gi|296091297|gb|ADG87249.1| phage SPO1 DNA polymerase-related protein [Thermobispora bispora
           DSM 43833]
          Length = 208

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 72/202 (35%), Gaps = 15/202 (7%)

Query: 68  DSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127
             +     SL  L+   R    C L   +  T+  T       M +G  P D ++  G P
Sbjct: 8   RFLPDGEPSLPALREAARRCQGCSLYRNATQTVFGTGPPDATFMFVGEQPGDQEDRQGAP 67

Query: 128 FSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMR 180
           F G  G +L + ++   I R +++++                +   S  E+  CRP +  
Sbjct: 68  FVGPAGRVLARAIEEAGIDRDRVYLTNAVKHFKFQTRGKRRIHERPSAAEIAACRPWLTA 127

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
           ++ ++ P + + +G           A +  +  G              +AT+HP  +++ 
Sbjct: 128 ELRVVDPVVTVVLGATAARALLGP-AFRVTRRRG---EPIPRGVGSYYVATIHPSAVLRA 183

Query: 241 PL-IKKNTWHALIT---LKKAL 258
           P   +   +   +    +   L
Sbjct: 184 PSGQRGPAYEGFLADVRVAARL 205


>gi|91779684|ref|YP_554892.1| Phage SPO1 DNA polymerase-related protein [Burkholderia xenovorans
           LB400]
 gi|91692344|gb|ABE35542.1| Phage SPO1 DNA polymerase-related protein [Burkholderia xenovorans
           LB400]
          Length = 214

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 78/199 (39%), Gaps = 20/199 (10%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
           Q+  +L E          C L   +   +         +M++G  P D++++ G+PF G 
Sbjct: 24  QQPATLDE-------CRRCTLWRNATQAVPGEGPRRASIMLVGEQPGDAEDLQGRPFVGP 76

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIEL 184
            G +LDK L+   + R  ++++                ++     E+E C   + +++  
Sbjct: 77  AGALLDKALEEAGLKRKDVYVTNAVKHFKWTPRGKRRMHKTPGQREIEACGYWLEQELRT 136

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPL 242
           +  ++++ +G        ++   +    LGK       H     +AT HP   ++   P 
Sbjct: 137 VRARVIVALGATALKAVLDDSHARLQDALGK----TIGHGEHLVVATYHPSFALRAPDPE 192

Query: 243 IKKNTWHALITLKKALKNL 261
            +++ +  ++   +    L
Sbjct: 193 TRRHVYDTIVAALQTADKL 211


>gi|194288723|ref|YP_002004630.1| uracil-DNA glycosylase [Cupriavidus taiwanensis LMG 19424]
 gi|193222558|emb|CAQ68561.1| putative Uracil-DNA glycosylase [Cupriavidus taiwanensis LMG 19424]
          Length = 202

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 65/174 (37%), Gaps = 11/174 (6%)

Query: 81  KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML 140
           +  L     C L   +   +  T      +M++G  P   +++ G PF G  G++LD+ L
Sbjct: 11  RGELNECRRCPLWRNATQGVPGTGAAHARIMLVGEQPGSQEDLQGSPFVGPAGHLLDEAL 70

Query: 141 QSIEIMRTQIHISMISP-----WHPPGNRNLSN--IEMEICRPIIMRQIELISPKILLFI 193
           Q+  + R ++ ++         W      + S    E+E C   + R++E + P +++ +
Sbjct: 71  QAAGLDRDKLFMTNAVKHFKFEWRGKRRLHKSPAQQEIEACNLWLERELEKVHPTVVVAL 130

Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247
           G           +      +         H     +AT HP   ++    +   
Sbjct: 131 GATAARAVLGRKSVTLAGMM----ETPVEHEGRLVIATYHPSFALRQRSDEARA 180


>gi|315500110|ref|YP_004088913.1| uracil-DNA glycosylase superfamily [Asticcacaulis excentricus CB
           48]
 gi|315418122|gb|ADU14762.1| Uracil-DNA glycosylase superfamily [Asticcacaulis excentricus CB
           48]
          Length = 280

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 52/270 (19%), Positives = 102/270 (37%), Gaps = 32/270 (11%)

Query: 9   QEQILTIALFYADSGVYWVFDE-PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQA 67
             ++ +   F  D  +  +++  P N    E++ +  +  +      N+    +PL   A
Sbjct: 12  MRELESYLSFLKDHELDDIYNAQPINRLLAENKSRSVTATA-----QNVSATVTPLPSAA 66

Query: 68  DSIAQKACSL----------------------HELKSLLRSFHDCHLC-STSLSTICATQ 104
              A +  SL                        L + + +F D  L        I    
Sbjct: 67  RVNALRPESLRHFDVERAVTAAAAIAASAATVEALYAAVDAFPDVPLRYEGGKGLIRGRG 126

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
               D++I+G  P   ++ +   F GK G++ D  L ++ +    + +     W P G R
Sbjct: 127 ALPADVLIVGDVPDADEDEAQAAFQGKPGHLTDAALSALGLNARTLRLPG-LFWRPAGGR 185

Query: 165 NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC-TPH 223
             ++ ++ +  P + R IEL +PK+L+  G        +++     +  GK  +L  +  
Sbjct: 186 PATDEDIRLTSPFLRRLIELSAPKVLILCGATAVRSVLDSNDSVQ-KLRGKAHHLTLSGG 244

Query: 224 SIIPTLATVHPQELIQYPLIKKNTWHALIT 253
           S +    T  P  L++ PL KK  W   + 
Sbjct: 245 SSLRVFVTFPPALLLRQPLAKKAFWSDFLL 274


>gi|225575388|ref|ZP_03783998.1| hypothetical protein RUMHYD_03478 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037333|gb|EEG47579.1| hypothetical protein RUMHYD_03478 [Blautia hydrogenotrophica DSM
           10507]
          Length = 158

 Score =  127 bits (319), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 5/161 (3%)

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160
                    +M+I   P   ++  G PF G++G +LD++L+S+ + R +I+I+ I+  HP
Sbjct: 1   MGRGDLNSRIMLIAEAPGRMEDEKGIPFVGRSGEILDELLKSVSLSRDEIYITNINKCHP 60

Query: 161 PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220
           PGNR+    E + C P +  +  LI PKI++ +G             +  +  G W    
Sbjct: 61  PGNRDPEEAEQQACMPFLKYETALIRPKIMVCLGRIAARKVIA-TGFRISREHGTWIE-- 117

Query: 221 TPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
                    A  HP  L++ P   + T      +K+ L+ L
Sbjct: 118 --RKGFFLTAVYHPSALLRDPSKVEETRRDFQEIKRKLEEL 156


>gi|148556998|ref|YP_001264580.1| uracil-DNA glycosylase superfamily protein [Sphingomonas wittichii
           RW1]
 gi|148502188|gb|ABQ70442.1| Uracil-DNA glycosylase superfamily [Sphingomonas wittichii RW1]
          Length = 261

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 55/255 (21%), Positives = 105/255 (41%), Gaps = 10/255 (3%)

Query: 8   SQEQILTIALFYADSGVYWVFDE-PNNEATYESQRKEKSIDSAIQPIT---NIRHIHSPL 63
           S  +I ++  ++ D+G+  + DE P +          + + +   P              
Sbjct: 12  STAEITSLMGWWEDAGLDVLVDEAPRDWLARVVPPVARPVAAVAAPAPVPAQPTVAAPIP 71

Query: 64  VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123
            Q A   A    +L   +S L +  +  +  ++   I A+      LM++   P   D  
Sbjct: 72  AQPAARAAAFPDTLDGFQSWLATSDEITMPMSAR--IAASGDPATGLMVLVDLPEAEDPA 129

Query: 124 SGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE 183
           +G+  SG  G++ DKML ++   R  +++S ++P  P G       +  +   +    + 
Sbjct: 130 NGRLLSGPAGDLFDKMLGAMGRDRQSLYLSAMAPGRPSGGFVD-PTQGALFGRLARHHVL 188

Query: 184 LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI 243
           L  P+ LL +G +    F N       +  G+  ++  P   +  +AT HP+ L+Q+P  
Sbjct: 189 LAQPRALLLMGEQPSRTFLNL---GFVEARGRVHDVQLPGGAVNAVATFHPRTLLQHPQQ 245

Query: 244 KKNTWHALITLKKAL 258
           K+  W  L  L K L
Sbjct: 246 KRRAWEDLQLLMKLL 260


>gi|162148935|ref|YP_001603396.1| uracil-DNA glycosylase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161787512|emb|CAP57108.1| Uracil-DNA glycosylase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 433

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 80/241 (33%), Gaps = 17/241 (7%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P            +S +     +         L         +  SL  L +  R    C
Sbjct: 190 PPGTDPSALPTDRESWEGTGLTLRPADLPRPALRLTEGLDIARIDSLPALIAAARDCLIC 249

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150
            +   +  T+ +    G  LM++G  P D ++  G+PF G  G +LD+ L    I R  +
Sbjct: 250 PMARQTTQTVFSDGRPGAALMLVGEQPGDQEDRVGRPFVGPAGQLLDRTLHEAGITRDAV 309

Query: 151 HISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
           +++                +   +   +  C P +  +  +++P++L+ +G         
Sbjct: 310 YVTNAVKHFRFQRRGTRRLHEKPTVENVTACAPWLAAERRIVAPRVLVMLGATAAGAVLG 369

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH------ALITLKKA 257
             +    +   +   L    +    L TVHP  L++ P     T         L   +  
Sbjct: 370 -RSVTIGRERSRPIPLADGSTG---LVTVHPSFLLRQPDEDARTREYARFVADLRLARDL 425

Query: 258 L 258
           L
Sbjct: 426 L 426


>gi|239834563|ref|ZP_04682891.1| uracil-DNA glycosylase, family 4 [Ochrobactrum intermedium LMG
           3301]
 gi|239822626|gb|EEQ94195.1| uracil-DNA glycosylase, family 4 [Ochrobactrum intermedium LMG
           3301]
          Length = 209

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 73/183 (39%), Gaps = 12/183 (6%)

Query: 64  VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123
              A +I+ +  +L ++ +  ++   C L   +  T+      G  +  +   P D ++I
Sbjct: 2   TSPAPAISHRQPTLEQVCAEAQTCRRCELYKDATQTVFGEGPVGAGIFFVAEQPGDKEDI 61

Query: 124 SGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRP 176
            G+P  G  G + D  L  + I R + +I+                ++  S   +E CR 
Sbjct: 62  EGRPLIGPAGQVFDACLAEVGIKRERCYITNAVKHFRHIQRGKRRLHQRPSTSHIEACRW 121

Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236
            + ++IE +SP I++ +G       F+    K     G+       H       T+HP  
Sbjct: 122 WLEQEIEQVSPHIIVALGAVAARAVFD-KPVKIAAVRGRCLQHENRH----VFVTIHPSY 176

Query: 237 LIQ 239
           L++
Sbjct: 177 LLR 179


>gi|330813682|ref|YP_004357921.1| uracil-DNA glycosylase, family 4 [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327486777|gb|AEA81182.1| uracil-DNA glycosylase, family 4 [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 227

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 2/167 (1%)

Query: 95  TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154
           T+   I + +     +M++G  PS  D  + + FS  +G +L KML +I I  +Q++++ 
Sbjct: 61  TNKKIILSNKNYKSKIMVLGDMPSQKDIDNNELFSDDSGELLTKMLGAISIDSSQVYLAN 120

Query: 155 ISPWHPPGNR-NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL 213
           I P++              + R I+   I  I+P  +L +G+      F  +     +N 
Sbjct: 121 IIPFYLTKEEGKNIKKYNSLLRKIVHEHISTINPGTILLLGSFALQTLFGEE-YSIAKNR 179

Query: 214 GKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
           G+W +    ++ I  + + HP  L++ P  KK +W  L  L+K L N
Sbjct: 180 GQWLSYSAANNSINIIPSFHPTFLLKQPSQKKKSWEDLQKLQKKLNN 226


>gi|254467751|ref|ZP_05081158.1| putative DNA polymerase related protein [Rhodobacterales bacterium
           Y4I]
 gi|206684188|gb|EDZ44674.1| putative DNA polymerase related protein [Rhodobacterales bacterium
           Y4I]
          Length = 488

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 77/219 (35%), Gaps = 17/219 (7%)

Query: 52  PITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLM 111
            +   R        +  +    A     L + L     C L   +   +     +   LM
Sbjct: 260 TLPPARTARVQAAAEQAAAEHWAGPQDGLAAALAGCTRCPLHCAATQAVPGEGPQDAALM 319

Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW-------HPPGNR 164
           ++G  P D ++++G+PF G  G +LD +     + R  ++++                ++
Sbjct: 320 LVGEQPGDREDLTGRPFVGPAGQLLDAVAAEAGVAREAVYLTNAVKHFKFRPQGRRRMHQ 379

Query: 165 NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS 224
                E++ CR  +  +++L+ P++++ +G            Q   +  G      T   
Sbjct: 380 RPDAGEVQRCRWWLDAEVKLVRPRLIVAMGATAALALTGRGEQLMAR-RGTV---ETSRQ 435

Query: 225 IIPTLATVHPQELIQYPLIKKNTWH------ALITLKKA 257
            +P L T+HP  +++ P               L   +  
Sbjct: 436 GMPVLLTLHPAHILRTPDPAAQARLRGLLRGDLAAARDR 474


>gi|170690548|ref|ZP_02881715.1| phage SPO1 DNA polymerase-related protein [Burkholderia graminis
           C4D1M]
 gi|170144983|gb|EDT13144.1| phage SPO1 DNA polymerase-related protein [Burkholderia graminis
           C4D1M]
          Length = 224

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 73/202 (36%), Gaps = 11/202 (5%)

Query: 48  SAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEG 107
                 T  R    P   + +  A       +  + L     C L + +   +       
Sbjct: 1   MVTTKRTPKRTPKRPSSSEGEEPAAPEVDPDQHPATLDDCRRCPLWANATQGVPGAGPRR 60

Query: 108 QDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------P 160
             +M++G  P D +++ G PF G  G +LD  L    + R +++++              
Sbjct: 61  APIMMVGEQPGDKEDLQGLPFVGPAGALLDDALVEAGVGRKEVYVTNAVKHFKWTPRGKR 120

Query: 161 PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220
             ++     E++ CR  + +++E +   +++ +G         +   +   ++GK     
Sbjct: 121 RMHKTPGQREVDACRYWLDQELESVGAHVIVALGATALKAVLEDPKSRLQDSIGKVIE-- 178

Query: 221 TPHSIIPTLATVHPQELIQYPL 242
             H     +AT HP   ++ P 
Sbjct: 179 --HGDRLVVATYHPSFALRAPD 198


>gi|296161715|ref|ZP_06844518.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp. Ch1-1]
 gi|295888029|gb|EFG67844.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp. Ch1-1]
          Length = 214

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 80/199 (40%), Gaps = 20/199 (10%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
           Q+  SL E          C L   +   +     +   +M++G  P D++++ G+PF G 
Sbjct: 24  QQPSSLDE-------CRRCALWRNATQAVPGEGPQRASIMLVGEQPGDAEDLQGRPFVGP 76

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIEL 184
            G +LDK L+   + R  ++++                ++     E+E C   + +++  
Sbjct: 77  AGALLDKALEEAGLKRKDVYVTNAVKHFKWTPRGKRRMHKTPGQREIEACGYWLEQELRA 136

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPL 242
           +  ++++ +G        ++   +   +LGK       H     +AT HP   ++   P 
Sbjct: 137 VGARVIVALGATALKAVLDDSHARLQDSLGK----TIGHGEHLVVATYHPSFALRAPDPE 192

Query: 243 IKKNTWHALITLKKALKNL 261
            +++ +  ++   +    L
Sbjct: 193 TRRHVYDTIVAALQTADKL 211


>gi|118473024|ref|YP_884681.1| uracil DNA glycosylase superfamily protein [Mycobacterium smegmatis
           str. MC2 155]
 gi|118174311|gb|ABK75207.1| uracil DNA glycosylase superfamily protein [Mycobacterium smegmatis
           str. MC2 155]
          Length = 209

 Score =  126 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 75/171 (43%), Gaps = 10/171 (5%)

Query: 86  SFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI 145
               C L   +   +         +M+IG  P D ++++G PF G  G +LD+ L++ +I
Sbjct: 23  ECRGCGLYRDATQAVFGAGGRSARIMMIGEQPGDKEDLAGLPFVGPAGRLLDRALEAADI 82

Query: 146 MRTQIHISMISPWHPPG---------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            R  ++++                  ++  S  E+  CRP ++ ++  + P +++ +G  
Sbjct: 83  DRDALYVTNAVKHFKFTRAAGGKRRIHKTPSRTEVVACRPWLIAEMTSVEPDVVVLLGAT 142

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247
                  ND +   Q+ G+  ++         +ATVHP  L++ P  ++ +
Sbjct: 143 AAKALLGNDFRV-TQHRGEVLHVDDVPGDPALVATVHPSSLLRGPKEERES 192


>gi|319791380|ref|YP_004153020.1| phage spo1 DNA polymerase-related protein [Variovorax paradoxus
           EPS]
 gi|315593843|gb|ADU34909.1| phage SPO1 DNA polymerase-related protein [Variovorax paradoxus
           EPS]
          Length = 228

 Score =  126 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 74/193 (38%), Gaps = 18/193 (9%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L +L     +  +C L   +  ++         LM++G  P D ++++G+PF G  G + 
Sbjct: 15  LRKLGDATDACRECPLGERATQSVFGEGPVHARLMVVGEQPGDKEDLAGRPFVGPAGRLF 74

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKI 189
           D+ +  +   R +++++                ++  +  E + C   +  +I L+ P  
Sbjct: 75  DRAVAELGWSRDRLYVTNAVKHFKYELRGKRRIHKTPAQREADACHHWLESEIALVEPVA 134

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ-YPLIKKNTW 248
           LL +G                +  G+W       +    L T+HP  L++  P  +   W
Sbjct: 135 LLALGAVAARSLLGRHVAVMSE-RGRWHE---DAAGRRVLVTLHPSALLRGDPEQRDAAW 190

Query: 249 HALITLKKALKNL 261
                 K  L +L
Sbjct: 191 ------KAWLDDL 197


>gi|170734559|ref|YP_001773673.1| phage SPO1 DNA polymerase-related protein [Burkholderia cenocepacia
           MC0-3]
 gi|169820597|gb|ACA95178.1| phage SPO1 DNA polymerase-related protein [Burkholderia cenocepacia
           MC0-3]
          Length = 223

 Score =  126 bits (316), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 69/191 (36%), Gaps = 18/191 (9%)

Query: 57  RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYT 116
           +    P   Q         +L        +   C L   +   +         +M++G  
Sbjct: 4   KTPDRPAPTQQPPDDDAPATLD-------ACRRCALWEHATQPVPGAGPVDAPIMLVGEQ 56

Query: 117 PSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPGNRNLS----NI 169
           P D ++ +G PF G  G MLD+ L    I R Q++++       W P G R L       
Sbjct: 57  PGDQEDRAGLPFVGAAGRMLDRALDEAGIERAQVYLTNAVKHFKWEPRGKRRLHKTPAQR 116

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E+  C   + R+++ + P++++ +G         ++     +                 +
Sbjct: 117 EVAACHYWLERELQAVQPRLVVALGATALRAVLQDNDATLERTRAPVRT----EDGRLVV 172

Query: 230 ATVHPQELIQY 240
           AT HP  +++ 
Sbjct: 173 ATYHPSYVLRT 183


>gi|307729968|ref|YP_003907192.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp.
           CCGE1003]
 gi|307584503|gb|ADN57901.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp.
           CCGE1003]
          Length = 490

 Score =  126 bits (316), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 85/224 (37%), Gaps = 17/224 (7%)

Query: 46  IDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQT 105
             S  + +     + +   +     A+ A  L E  S L +   C L   +   +     
Sbjct: 259 ARSGARRLAQASGVAAFNGKAISVEAEVAQPLREQPSSLDACRRCDLWRHATQAVGGVGP 318

Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPG 162
               +M+IG  P D +++SG+PF G  G +L+  +    + R Q++++       W P G
Sbjct: 319 RDARIMVIGEQPGDHEDLSGQPFVGPAGQLLNSAITQAGLRREQLYLTNAVKHFKWEPRG 378

Query: 163 NRNLS----NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218
            R L       EM+ C   + +++E + P +++ +G    N      +       G    
Sbjct: 379 KRRLHKTAAQREMQACSHWLTQELETVRPSVVVTLGTTALNALLGEKSSLQDYLHGP-FE 437

Query: 219 LCTPHSIIPTLATVHPQELIQYPLIKKNTWHA--LITLKKALKN 260
           L         +AT HP   ++      +      ++ ++ AL  
Sbjct: 438 LEGGWG----IATYHPSFALRQQS---DAARDKVMVAIRNALSE 474


>gi|158421875|ref|YP_001523167.1| phage SPO1 DNA polymerase-related protein [Azorhizobium caulinodans
           ORS 571]
 gi|158328764|dbj|BAF86249.1| phage SPO1 DNA polymerase-related protein [Azorhizobium caulinodans
           ORS 571]
          Length = 197

 Score =  126 bits (316), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 71/184 (38%), Gaps = 17/184 (9%)

Query: 86  SFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI 145
           +   C L   +  T+         LM++G  P D ++  G PF G  G +LD+ L++  I
Sbjct: 16  NCIRCPLYRDATQTVFGEGAADAPLMLVGEQPGDQEDRKGHPFVGPAGGVLDRALEAAGI 75

Query: 146 MRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTK 198
            R  ++++                ++  +  E+  CR  + R++ L+ P +++ +G    
Sbjct: 76  ARGAVYVTNAVKHFKFERRGKRRLHKGPNAGEIAACRWWLDRELALVRPSLVVALGASAA 135

Query: 199 NFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW------HALI 252
           +      A    +  G+          +  L T HP  +++ P  +            L+
Sbjct: 136 HALLG-RAVTISRTRGRVMEASGD---VRLLVTTHPSAILRVPDAEARAKAFDALVADLV 191

Query: 253 TLKK 256
             ++
Sbjct: 192 VARE 195


>gi|255261284|ref|ZP_05340626.1| uracil-DNA glycosylase superfamily protein [Thalassiobium sp.
           R2A62]
 gi|255103619|gb|EET46293.1| uracil-DNA glycosylase superfamily protein [Thalassiobium sp.
           R2A62]
          Length = 475

 Score =  126 bits (316), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 71/169 (42%), Gaps = 11/169 (6%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
             L + +R+   C L   +   +     +   LMI+G  P D +++ G+PF G  G + D
Sbjct: 277 AGLPAAIRNCARCELACHATQAVLGEGPKTAPLMIVGEQPGDKEDLQGRPFVGPAGQLFD 336

Query: 138 KMLQSIEIMRTQIHISMISPW-------HPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
           ++ + + + R+Q +++                ++  +  E++ CR  +  ++  ++P+++
Sbjct: 337 EIAEEVGLDRSQAYVTNAVKHFKFKAQGRRRIHQRPNRSEIDQCRWWLDAEVRRVAPRLI 396

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
           + +G          +     +  G            P L T+HP  +++
Sbjct: 397 VAMGATAAEALTG-NGDAILKRRGTV---QIADGHPPVLITLHPSYILR 441


>gi|108799959|ref|YP_640156.1| phage SPO1 DNA polymerase-related protein [Mycobacterium sp. MCS]
 gi|119869069|ref|YP_939021.1| phage SPO1 DNA polymerase-related protein [Mycobacterium sp. KMS]
 gi|108770378|gb|ABG09100.1| phage SPO1 DNA polymerase-related protein [Mycobacterium sp. MCS]
 gi|119695158|gb|ABL92231.1| phage SPO1 DNA polymerase-related protein [Mycobacterium sp. KMS]
          Length = 230

 Score =  126 bits (316), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 81/218 (37%), Gaps = 21/218 (9%)

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120
              V  A+        +  L   +++   C L   +   +    +    +M +G  P D 
Sbjct: 2   PTKVPGAEDFVPDTRDVSILADAVQACRGCELYRDATQGVFGQGSANATVMFVGEQPGDQ 61

Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG---------NRNLSNIEM 171
           ++ +G+PF G  G +LDK L S  I R  ++++                  ++  S  E+
Sbjct: 62  EDRAGEPFVGPAGRLLDKALVSAGIDRDGVYVTNAVKHFKFTLPERGKRRIHKTPSRTEV 121

Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS------NLCTPHSI 225
             CRP ++ +++ + P++++ +G         ND + T    G+             H  
Sbjct: 122 VACRPWLLAELDAVRPEVVVLLGATAAKALLGNDFRLTAH-RGEVLALPPVTEPADLHVD 180

Query: 226 IPTLATVHPQELIQYPLIKKN-----TWHALITLKKAL 258
              + T HP  +++ P   +          L  + + +
Sbjct: 181 PAVVVTAHPSSVLRGPAENRQQAFDALVEDLRVVARLM 218


>gi|87200055|ref|YP_497312.1| uracil-DNA glycosylase superfamily protein [Novosphingobium
           aromaticivorans DSM 12444]
 gi|87135736|gb|ABD26478.1| Uracil-DNA glycosylase superfamily [Novosphingobium aromaticivorans
           DSM 12444]
          Length = 476

 Score =  126 bits (316), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 78/250 (31%), Gaps = 19/250 (7%)

Query: 24  VYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSL 83
           V  +  E   +            +      +    +     Q    + +   S+  + + 
Sbjct: 231 VGAMLKEMPRKYWKNMPEAALIPELIAGAQSREARMVQAGEQ---DLGETPVSIDAIGAA 287

Query: 84  LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143
           + +   C +       +         LMIIG  P + +   G+PF G  G +L   L+  
Sbjct: 288 ILACRRCDIGCNGTRAVMGEGPHDAALMIIGEQPGEQEEAQGRPFVGPAGQLLRTHLEHA 347

Query: 144 EIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            I   + +++                ++N S  E+++CR  +  +  L+ P+++L +G  
Sbjct: 348 GIPAERAYVTNAVKHFKFMPQGKRRLHQNPSAREIDVCRWWLEGERGLVRPRLILALGAS 407

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ-----YPLIKKNTWHAL 251
                         +  G    L           T HP  L++         +    + L
Sbjct: 408 AARSLLGRTVSVQ-KVRGAPHVL---DDGSELWITTHPSYLLRLDDGGRSEEEARFSNDL 463

Query: 252 ITLKKALKNL 261
             +   L  +
Sbjct: 464 QKVAARLSQI 473


>gi|115360375|ref|YP_777512.1| phage SPO1 DNA polymerase-related protein [Burkholderia ambifaria
           AMMD]
 gi|115285703|gb|ABI91178.1| phage SPO1 DNA polymerase-related protein [Burkholderia ambifaria
           AMMD]
          Length = 217

 Score =  126 bits (316), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 67/179 (37%), Gaps = 11/179 (6%)

Query: 69  SIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128
           + A+ A    +  + L +   C L   +   +         +M++G  P D ++ +G PF
Sbjct: 5   APAKPAAPHDQAPATLDACRRCGLWEHATQPVPGAGPTDARIMLVGEQPGDQEDRTGIPF 64

Query: 129 SGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQ 181
            G  G MLD+ L    I R  ++++                ++  +  E+  C   + R+
Sbjct: 65  VGAAGRMLDRALDEAGIERASVYVTNAVKHFKWEPRGKRRMHKTPAQREVAACHYWLERE 124

Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
           +  + P++++ +G         ++     +                 +AT HP  +++ 
Sbjct: 125 LAALGPRVIVALGATALRAVLQDNNATLERTRQPVR----SPDGCLVVATYHPSYVLRT 179


>gi|304393847|ref|ZP_07375772.1| uracil-DNA glycosylase:Phage SPO1 DNA polymerase-related protein
           [Ahrensia sp. R2A130]
 gi|303294046|gb|EFL88421.1| uracil-DNA glycosylase:Phage SPO1 DNA polymerase-related protein
           [Ahrensia sp. R2A130]
          Length = 516

 Score =  126 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 37/248 (14%), Positives = 88/248 (35%), Gaps = 29/248 (11%)

Query: 27  VFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRS 86
           +            + +  + + A+     +       + +    A     L  L  +L++
Sbjct: 253 LIKSARERENMMVESEPTAPNPALMRNREMPVPTDGFIHELPPQAPL-NDLGSLNDMLKN 311

Query: 87  FHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM 146
              C L   +  T+C   T+   +M++G  P D++++ G+ F G  G +L+   + + I 
Sbjct: 312 CRACPLWQPATQTVCGAGTQRASIMLVGEQPGDNEDLQGQAFIGPAGKILEAAFEEVGID 371

Query: 147 RTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199
           R    ++                ++N S  E++ C   + R++ L+ P++++ +G     
Sbjct: 372 RADTWLTNAVKHFKFEPRGKRRIHQNPSVGEIDHCSWWLQRELALVQPRVVVALGASAVR 431

Query: 200 FFFNNDAQKTYQNLGKWSNLCT--------------------PHSIIPTLATVHPQELIQ 239
                   K     G  + L +                      + +  +AT HP  +++
Sbjct: 432 GLTG-KTHKLGDLRGNATPLASLMKKGRELPLELSGLGGNGANDTGVQLVATYHPSYILR 490

Query: 240 YPLIKKNT 247
            P  +   
Sbjct: 491 VPNEQARA 498


>gi|258405319|ref|YP_003198061.1| phage SPO1 DNA polymerase-like protein [Desulfohalobium retbaense
           DSM 5692]
 gi|257797546|gb|ACV68483.1| phage SPO1 DNA polymerase-related protein [Desulfohalobium
           retbaense DSM 5692]
          Length = 258

 Score =  126 bits (315), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 67/174 (38%), Gaps = 3/174 (1%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L  L+  + +   C L  T  + +         LMI+   P D ++  G+ F G +G + 
Sbjct: 5   LERLRDQITACRRCDLAETRTNALPGAGNIHARLMIVAQAPGDQEDREGRHFIGPSGRVF 64

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           D++L    + R ++ ++ +     P NR     E+  C P + ++I+++   IL+ +G  
Sbjct: 65  DRLLDQAGVARAELFLTNLLKCRLPKNRRPKQREIIACLPFLEQEIDIVEADILVPLGFY 124

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTP---HSIIPTLATVHPQELIQYPLIKKNT 247
                 + +     Q   +          +         HP  L+  P  ++  
Sbjct: 125 ATRAVLDLNVLPFPQAKAESPESFGRVQWNGRKKVFPLPHPAALLYNPAFEEAA 178


>gi|172065650|ref|YP_001816362.1| phage SPO1 DNA polymerase-related protein [Burkholderia ambifaria
           MC40-6]
 gi|171997892|gb|ACB68809.1| phage SPO1 DNA polymerase-related protein [Burkholderia ambifaria
           MC40-6]
          Length = 217

 Score =  126 bits (315), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 66/170 (38%), Gaps = 11/170 (6%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            E  + L +   C L   +   +         +M++G  P D ++ +G PF G  G MLD
Sbjct: 14  DEAPATLDACRRCGLWEHATQPVPGAGPTDARIMLVGEQPGDQEDRTGIPFVGAAGRMLD 73

Query: 138 KMLQSIEIMRTQIHISMIS---PWHPPGNRNLS----NIEMEICRPIIMRQIELISPKIL 190
           + L    I R  ++++       W P G R L       E+  CR  + R++  + P+++
Sbjct: 74  RALDEAGIERASVYVTNAVKHFKWEPRGKRRLHKTPAQREVAACRYWLERELAALGPRVI 133

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
           + +G         ++     +                 +AT HP  +++ 
Sbjct: 134 VALGATALRAVLQDNDATLERTRQPVR----SPDGCLVVATYHPSYVLRT 179


>gi|325109833|ref|YP_004270901.1| phage SPO1 DNA polymerase-related protein [Planctomyces
           brasiliensis DSM 5305]
 gi|324970101|gb|ADY60879.1| phage SPO1 DNA polymerase-related protein [Planctomyces
           brasiliensis DSM 5305]
          Length = 461

 Score =  125 bits (314), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 88/227 (38%), Gaps = 11/227 (4%)

Query: 35  ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94
              E++   + +  A   + ++      L + A     +  +L  L++       C L  
Sbjct: 226 TLPEAELIPELLAEAEARVKDMVSRQEGLHKSAADFLPEVRTLQNLRAQAAVCTGCELHG 285

Query: 95  TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154
            +  T+    +E   L  +G  P D ++++G+PF G  G +L +M+Q   +  ++++++ 
Sbjct: 286 PATQTVFGMGSEHARLAFVGEQPGDEEDLAGEPFVGPAGRLLREMMQQTNVDPSEVYLTN 345

Query: 155 ISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207
                          ++   + E+  C+P +  +++ + P  LL +G  +       D +
Sbjct: 346 TVKHFKYVQTGPRRLHKKPGSREITACKPWLEAELQYLKPAGLLLLGATSAQAVLGRDFR 405

Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
                 GK          I   AT HP  +++ P   +     L  L
Sbjct: 406 L-SDQRGKTVESRWCRHTI---ATWHPAAILRAPTPARQKEMQLQLL 448


>gi|269837406|ref|YP_003319634.1| phage SPO1 DNA polymerase-like protein [Sphaerobacter thermophilus
           DSM 20745]
 gi|269786669|gb|ACZ38812.1| phage SPO1 DNA polymerase-related protein [Sphaerobacter
           thermophilus DSM 20745]
          Length = 209

 Score =  125 bits (314), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 82/202 (40%), Gaps = 16/202 (7%)

Query: 68  DSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127
           + IA ++  + +++  + +  +          +        DL++IG  P   +   G P
Sbjct: 5   EEIAARSRRMEQIRRAMLAAPEFATYCNEKRPVFGEGALTADLVLIGEAPGGCEERLGHP 64

Query: 128 FSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG--------NRNLSNIEMEICRPIIM 179
           F G  G +L + L    I R  + I+ +    P          NR  +  E+E  RP ++
Sbjct: 65  FVGPAGQVLTEALAQAGIDREDLWITNVVKCRPTMEGVGGRLRNRTPTPAEVEWFRPWLL 124

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
           R++++I P+ ++ +G    +    + A +  +  G W +     + +PTL T HP  L++
Sbjct: 125 RELDVIDPRAIVCLGATAGSAVL-HRALRITRERGIWFD---GPNGLPTLVTYHPAYLLR 180

Query: 240 YPLIKK----NTWHALITLKKA 257
               +          L T  + 
Sbjct: 181 RTQDRDDRFGEFIDDLRTAGER 202


>gi|134291140|ref|YP_001114909.1| phage SPO1 DNA polymerase-related protein [Burkholderia
           vietnamiensis G4]
 gi|134134329|gb|ABO58654.1| phage SPO1 DNA polymerase-related protein [Burkholderia
           vietnamiensis G4]
          Length = 239

 Score =  125 bits (314), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 76/199 (38%), Gaps = 13/199 (6%)

Query: 49  AIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQ 108
                 + +    P    AD+    A    +  + L +   C L   +   +        
Sbjct: 9   PTHAAQHAKPSQRPQPDPADTHGGDAD--DDAPATLDACRRCGLWEHATQPVPGAGPADA 66

Query: 109 DLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPGNRN 165
            +M++G  P D ++ +G PF G  G MLD+ L    I R +++++       W P G R 
Sbjct: 67  RIMLVGEQPGDQEDRTGVPFVGAAGRMLDRALDEAGIDRARVYVTNAVKHFKWEPRGKRR 126

Query: 166 LS----NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221
           L       E+  CR  + R++E ++P++++ +G         ++     +          
Sbjct: 127 LHKTPAQREVAACRYWLERELETLAPRVIVALGATALRAVLQDNDATLERARQPLR---- 182

Query: 222 PHSIIPTLATVHPQELIQY 240
                  +AT HP  +++ 
Sbjct: 183 SPGGRLVVATHHPSYVLRT 201


>gi|110677624|ref|YP_680631.1| uracil-DNA glycosylase, putative [Roseobacter denitrificans OCh
           114]
 gi|109453740|gb|ABG29945.1| uracil-DNA glycosylase, putative [Roseobacter denitrificans OCh
           114]
          Length = 479

 Score =  125 bits (314), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 72/209 (34%), Gaps = 11/209 (5%)

Query: 38  ESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL 97
            S  +     +   P      I +   QQA   +        L   +     C L  T+ 
Sbjct: 243 ASAPERARQMALAAPTLPPTRISAIQAQQAAHESVWDGPPGSLPKAIAGCTRCPLHKTAT 302

Query: 98  STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP 157
             +         LMI+G  P D +++ G+PF G  G + D +     + R ++ I+    
Sbjct: 303 QAVPGEGPLDARLMIVGEQPGDQEDLIGRPFVGPAGQLFDSIAADAGLDRGKVFITNAVK 362

Query: 158 W-------HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210
                       ++  +  E+  C+  +  ++  ++P  L+     T         +   
Sbjct: 363 HFKFTPRGRKRIHQRPNQGEVAHCKWWLDAELREVAP-DLVVAMGATAAAALTGSGKAIS 421

Query: 211 QNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
              G+     T  + IP L T HP  L++
Sbjct: 422 ARRGRI---ETGEAGIPVLITWHPSYLLR 447


>gi|126435587|ref|YP_001071278.1| phage SPO1 DNA polymerase-related protein [Mycobacterium sp. JLS]
 gi|126235387|gb|ABN98787.1| phage SPO1 DNA polymerase-related protein [Mycobacterium sp. JLS]
          Length = 229

 Score =  125 bits (314), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 83/219 (37%), Gaps = 21/219 (9%)

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120
              V  A+        +  L   +++   C L   +   +    +    +M +G  P D 
Sbjct: 2   PTKVPGAEDFVPDTRDVSILADAVQACRGCELYRDATQGVFGQGSADATVMFVGEQPGDR 61

Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG---------NRNLSNIEM 171
           ++ +G+PF G  G +LDK L S  I R  ++++                  ++  S  E+
Sbjct: 62  EDRAGEPFVGPAGRLLDKALVSAGIDRDGVYVTNAVKHFKFTLPERGKRRIHKTPSRTEV 121

Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS------NLCTPHSI 225
             CRP ++ +++ + P++++ +G         ND + T +  G+                
Sbjct: 122 VACRPWLLAELDAVRPEVVVLLGATAAKALLGNDFRLTAR-RGEVLALPPVTEPADLDVD 180

Query: 226 IPTLATVHPQELIQYPLIKKN-----TWHALITLKKALK 259
              +AT HP  +++ P   +          L  + + ++
Sbjct: 181 PAVVATAHPSSVLRGPAENRQQAFDALVEDLRVVARLMR 219


>gi|158522520|ref|YP_001530390.1| uracil-DNA glycosylase superfamily protein [Desulfococcus
           oleovorans Hxd3]
 gi|158511346|gb|ABW68313.1| Uracil-DNA glycosylase superfamily [Desulfococcus oleovorans Hxd3]
          Length = 227

 Score =  125 bits (314), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 71/174 (40%), Gaps = 9/174 (5%)

Query: 85  RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIE 144
           +    C L S   S +         LM++  +P      +G PFSG  G +  ++L +++
Sbjct: 63  QGCDQCPLASAGPSPVHGRGPSLARLMVVSDSP----LGAGDPFSGNEGELFTRILLAMK 118

Query: 145 IMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204
           +   ++ ++ +     P N   +   +  CR  +  +I  + P ++  +G          
Sbjct: 119 LAPDRVFVTAMVRCPVPENAKPAPRALVACRAFLEEEIRKVKPTVIWVMGETAAQALLGA 178

Query: 205 DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
           D        G++ +       IP + T HP++++  P +K+  W  +  + K L
Sbjct: 179 DDPL-DHLRGRFHDYQN----IPVMPTWHPRDILSDPSLKRPVWDDVQQIMKFL 227


>gi|84515694|ref|ZP_01003055.1| hypothetical protein SKA53_13631 [Loktanella vestfoldensis SKA53]
 gi|84510136|gb|EAQ06592.1| hypothetical protein SKA53_13631 [Loktanella vestfoldensis SKA53]
          Length = 475

 Score =  125 bits (314), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 75/216 (34%), Gaps = 11/216 (5%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P      E++ +      +         + +              SL + +        C
Sbjct: 238 PAMLKDAEARVQRMRAAGSTPARPGAAAVSTRYRAAMPQAVNLPDSLDQAREAALQCRRC 297

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150
            LC  +  T+  T  +G  LMI+G  P D +++ GKPF G  G +L + + +  +     
Sbjct: 298 TLCEKATQTVWGTGAQGAALMIVGEQPGDREDLEGKPFVGPAGQILQQAMAAAGVDPAAT 357

Query: 151 HISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
            ++                +++    E++ CR  +  ++  + PK+ + +G         
Sbjct: 358 WLTNAVKHFKFTARGKRRMHQSPDRAEIDHCRWWLGLELGFVQPKLTVALGATAAYALTG 417

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
            +A       G+           P L T HP  +++
Sbjct: 418 -NAAPMADRQGRIEQGLHNG---PVLVTWHPSYILR 449


>gi|296169122|ref|ZP_06850781.1| family 4 uracil-DNA glycosylase [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295896242|gb|EFG75904.1| family 4 uracil-DNA glycosylase [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 220

 Score =  125 bits (313), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 77/203 (37%), Gaps = 18/203 (8%)

Query: 67  ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126
           AD        L  L++       C L + +  T+      G  +M++G  P D ++ +G+
Sbjct: 9   ADRYLPAERGLDALRAAAECCRGCQLFADATQTVFGRGRAGAPIMLVGEQPGDREDRAGE 68

Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG--------NRNLSNIEMEICRPII 178
           PF G  G +LD+ L+   I     + +                 ++     E+  CRP +
Sbjct: 69  PFVGPAGRLLDRALEEAGIDPACTYETNAVKHFKFTRKGGKRRIHQKPGRTEVVACRPWL 128

Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP----TLATVHP 234
           + +IE + P++++ +G           A +     G+   L    + +      +ATVHP
Sbjct: 129 IAEIEAVRPRVIVCLGATAAQSLLGA-AFRVSAERGRQLRLPAALADVEPEPVVVATVHP 187

Query: 235 QELIQYPLIK-----KNTWHALI 252
             +++    +     +     L 
Sbjct: 188 SAVLRDRSDRHDEAYRLFVDDLR 210


>gi|227498884|ref|ZP_03929024.1| uracil-DNA glycosylase [Acidaminococcus sp. D21]
 gi|226904336|gb|EEH90254.1| uracil-DNA glycosylase [Acidaminococcus sp. D21]
          Length = 212

 Score =  125 bits (313), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 43/189 (22%), Positives = 77/189 (40%), Gaps = 10/189 (5%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
             L  L+  +     C L    ++ +         L+I+G  P   ++  G P  G +G 
Sbjct: 2   EELDILQRKMEDCTACPLRGDCIAPVGWFGDPHSPLVIVGEGPGGVEDDYGCPLIGPSGQ 61

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPII-MRQIELISPKILLFI 193
           +LDK L S++I R  +  + +    P  NR  +  E   C   I   ++ LI+PK+++ +
Sbjct: 62  LLDKALWSVKITRDHVLTTNVIKCRPRNNRTPTPEEAAFCAHRILDEELRLIAPKVIIAL 121

Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ-----YPLIKKNTW 248
           G     +F   +A +  +  G+W      +     +AT HP  L++         K   +
Sbjct: 122 GGVALKYFKGPEA-RITKERGQWFRT---NQGFDAIATFHPSYLLRLSGKAQIDAKWQVF 177

Query: 249 HALITLKKA 257
           H L   K  
Sbjct: 178 HDLEAAKAK 186


>gi|110667342|ref|YP_657153.1| uracil-DNA glycosylase-like protein [Haloquadratum walsbyi DSM
           16790]
 gi|109625089|emb|CAJ51508.1| uracil-DNA glycosylase homolog [Haloquadratum walsbyi DSM 16790]
          Length = 232

 Score =  125 bits (313), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 74/185 (40%), Gaps = 4/185 (2%)

Query: 60  HSPLVQQADSIAQKACSLHELKSLLRSFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPS 118
            S  +  A      A +++ L   + +   C  L  +    +        +L+ IG  P 
Sbjct: 11  TSSDLNTATDAPGSASTVNGLD--VTACKRCQGLVESRSQIVNGVGPADAELVFIGEAPG 68

Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPII 178
            +++  G+PF G++G++LD  L    + R  I I+      PP NRN +  E+  CR  +
Sbjct: 69  ANEDEYGEPFVGRSGDVLDDALNEAGVSRDSIRITNCVRCRPPENRNPTTEELSNCRRYL 128

Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238
             ++  ++P +++ +G        +     T    G  +++         + +VHP   +
Sbjct: 129 EHELSALNPAVIVTLGKVPSEHLLDRQIAVTTAA-GDVTDVRLGDQSYRVIISVHPAATL 187

Query: 239 QYPLI 243
                
Sbjct: 188 YDQSQ 192


>gi|107022916|ref|YP_621243.1| phage SPO1 DNA polymerase-related protein [Burkholderia cenocepacia
           AU 1054]
 gi|116686841|ref|YP_840088.1| phage SPO1 DNA polymerase-related protein [Burkholderia cenocepacia
           HI2424]
 gi|105893105|gb|ABF76270.1| phage SPO1 DNA polymerase-related protein [Burkholderia cenocepacia
           AU 1054]
 gi|116652556|gb|ABK13195.1| phage SPO1 DNA polymerase-related protein [Burkholderia cenocepacia
           HI2424]
          Length = 223

 Score =  125 bits (313), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 67/191 (35%), Gaps = 18/191 (9%)

Query: 57  RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYT 116
           +        +         +L        +   C L   +   +         +M++G  
Sbjct: 4   KTPDRQAPTRQPPDDDAPATLD-------ACRRCALWEHATQPVPGAGPVDAPIMLVGEQ 56

Query: 117 PSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPGNRNLS----NI 169
           P D ++ +G PF G  G MLD+ L    I R  ++++       W P G R L       
Sbjct: 57  PGDQEDRAGLPFVGAAGRMLDRALDEAGIERAHVYLTNAVKHFKWEPRGKRRLHKTPAQR 116

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E+  C   + R+++ + P++++ +G         ++     +                 +
Sbjct: 117 EVAACHYWLERELQAVQPRVVVALGATALRAVLQDNDATLERTRAPVRT----EDGRLVV 172

Query: 230 ATVHPQELIQY 240
           AT HP  +++ 
Sbjct: 173 ATYHPSYVLRT 183


>gi|237756256|ref|ZP_04584815.1| uracil-DNA glycosylase, family 4 [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237691575|gb|EEP60624.1| uracil-DNA glycosylase, family 4 [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 161

 Score =  124 bits (312), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 38/140 (27%), Positives = 68/140 (48%)

Query: 60  HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSD 119
              L Q++ +   K   L+++    +    C L     + +         +M IG  P +
Sbjct: 22  KPILNQKSSNQIDKIEELNKIFEETKVCTKCDLHKNRTNPVLGEGNINAKIMFIGEAPGE 81

Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIM 179
            ++  G+PF GK G +L K +++    R +++I+ I+   PP NR  +  E E C P ++
Sbjct: 82  EEDKQGRPFVGKAGKLLTKCIENAGYRREEVYIANINKCRPPNNRTPTIEEQEACIPYLL 141

Query: 180 RQIELISPKILLFIGNKTKN 199
           RQIE+I+PK+L  +G     
Sbjct: 142 RQIEIINPKVLCLLGATAYR 161


>gi|221198651|ref|ZP_03571696.1| uracil-DNA glycosylase, family 4 [Burkholderia multivorans CGD2M]
 gi|221207882|ref|ZP_03580889.1| uracil-DNA glycosylase, family 4 [Burkholderia multivorans CGD2]
 gi|221172379|gb|EEE04819.1| uracil-DNA glycosylase, family 4 [Burkholderia multivorans CGD2]
 gi|221181102|gb|EEE13504.1| uracil-DNA glycosylase, family 4 [Burkholderia multivorans CGD2M]
          Length = 258

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 78/198 (39%), Gaps = 12/198 (6%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELK-SLLRSFHDCHLCSTSLSTICATQTEGQD 109
                     +  + +A S +    +  + + + L +   C L   +   +  T      
Sbjct: 27  ARAPRAGMRSAGAMTRAASASGADDTPDDQRPATLDACRRCGLWEHATQPVPGTGPRHAS 86

Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPGNRNL 166
           ++++G  P D ++ +G PF G  G++LD+ L +  I R  ++++       W P G R L
Sbjct: 87  IVLVGEQPGDQEDRTGVPFVGAAGHVLDRALDAAGIDRRSVYLTNAVKHFKWEPRGKRRL 146

Query: 167 S----NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP 222
                  E+  CR  + R++E + P++++ +G         ++     +           
Sbjct: 147 HKTPAQREITACRYWLDRELESVHPRVIVALGGTALRAVLQDNDATLQRTPTPTRTAQ-- 204

Query: 223 HSIIPTLATVHPQELIQY 240
                 +AT HP  +++ 
Sbjct: 205 --GYLVVATYHPSYVLRT 220


>gi|302543469|ref|ZP_07295811.1| uracil-DNA glycosylase, family 4 [Streptomyces hygroscopicus ATCC
           53653]
 gi|302461087|gb|EFL24180.1| uracil-DNA glycosylase, family 4 [Streptomyces himastatinicus ATCC
           53653]
          Length = 216

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 73/217 (33%), Gaps = 16/217 (7%)

Query: 56  IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115
                         +   A  L  L+        C L   +  T+         ++++G 
Sbjct: 3   PGTAPEDAYTAEPFVPGGAG-LDALREAAAGCRGCPLHREASQTVFGAGAPDARVVLVGE 61

Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG----------NRN 165
            P D ++  G+PF G  G +L + L    +   + +I+                   ++ 
Sbjct: 62  QPGDQEDRQGRPFVGPAGKVLTRALDEAGVDPDETYITNAVKHFKFTVVPERGKRRIHKP 121

Query: 166 LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI 225
            S  EM  CRP +  ++ +I P++++ +G            +   +  G           
Sbjct: 122 PSLREMTACRPWLAAEVHVIDPEVIVALGATAGKALLGPSFRV-TKQRGMLLPCPALD-G 179

Query: 226 IPTLATVHPQELIQYPLIK---KNTWHALITLKKALK 259
              LAT+HP  +++    +   +     L  + + L+
Sbjct: 180 HEMLATIHPSAVLRADDREAVYRGLVSDLRVVAETLR 216


>gi|78779060|ref|YP_397172.1| phage SPO1 DNA polymerase-related protein [Prochlorococcus marinus
           str. MIT 9312]
 gi|78712559|gb|ABB49736.1| phage SPO1 DNA polymerase-related protein [Prochlorococcus marinus
           str. MIT 9312]
          Length = 167

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 11/168 (6%)

Query: 97  LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI-MRTQIHISMI 155
              +    +   DL+IIG  P   +++ GKP+ GK+G +L+++L    I  +  ++   +
Sbjct: 2   KRLVIGRGSVFADLLIIGEAPGAQEDLEGKPYVGKSGKLLNELLIKAGIDYKEDVYFCNV 61

Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK 215
               PP NR  +  E+ I +P +++QI+L+ PK +L  G+                  G+
Sbjct: 62  IKCRPPNNRKPTAREINIHKPWLLQQIKLVDPKFILLTGSTAMRAILEVK-DPISNLRGQ 120

Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLIK-----KNTWHALITLKKAL 258
           W            +   HP  L+++P  +       T   L  L   L
Sbjct: 121 W----IKKDGREIMVIFHPSYLLRFPSKEINKPYHLTLKDLENLGGKL 164


>gi|326333079|ref|ZP_08199329.1| uracil-DNA glycosylase, family 4 [Nocardioidaceae bacterium
           Broad-1]
 gi|325949131|gb|EGD41221.1| uracil-DNA glycosylase, family 4 [Nocardioidaceae bacterium
           Broad-1]
          Length = 210

 Score =  124 bits (311), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 81/210 (38%), Gaps = 16/210 (7%)

Query: 66  QADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISG 125
            A     ++ +L EL+S ++    C L   +   +         LM++G  P D ++  G
Sbjct: 2   SAAEWVPESPTLAELRSAVQDCRGCELYRDATQGVMGEGPTPAPLMLLGEQPGDREDREG 61

Query: 126 KPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPII 178
           +PF G  G +L + L    I     + + +              +++ ++ ++  C P +
Sbjct: 62  EPFVGPAGGILHEALADAGIDPEATYTTNVVKHFRHRLSGKRRIHQSPTSKQVGACAPWL 121

Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC----TPHSIIPTLATVHP 234
             +++L+ P  ++ +G       F +  +   +  G   +      T       LAT HP
Sbjct: 122 AAELDLVRPTGVVLLGGTAGKALFGSSFRV-GEARGHLLDWPEAITTATLDPWVLATTHP 180

Query: 235 QELIQYPLIKKNTWH----ALITLKKALKN 260
             +++    ++ T+      L     ALK 
Sbjct: 181 SAVLRAEDERQATYDGLVADLKVAAAALKK 210


>gi|323527938|ref|YP_004230090.1| phage SPO1 DNA polymerase-like protein [Burkholderia sp. CCGE1001]
 gi|323384940|gb|ADX57030.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp.
           CCGE1001]
          Length = 228

 Score =  124 bits (311), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 73/199 (36%), Gaps = 11/199 (5%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
               + +        + +  AQ      +  + L     C L + +   +         +
Sbjct: 8   SKRASKQTTKPTSQTEGEIPAQAEVDPDQQPATLDDCRRCPLWANATQGVPGAGPRRAPI 67

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGN 163
           M++G  P D +++ G PF G  G +LD  L    + R  ++++                +
Sbjct: 68  MMVGEQPGDKEDLQGLPFVGPAGALLDDALVEAGVGRKDVYVTNAVKHFKWTPRGKRRMH 127

Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH 223
           +  +  E++ CR  + +++E +  ++++ +G         +   +    +GK       H
Sbjct: 128 KTPAQREVDACRYWLDQELESVGAQVIVALGATALKAVLEDPKSRLQDAIGKVIE----H 183

Query: 224 SIIPTLATVHPQELIQYPL 242
                +AT HP   ++ P 
Sbjct: 184 GDRLVVATYHPSFALRAPD 202


>gi|290955519|ref|YP_003486701.1| DNA polymerase related protein [Streptomyces scabiei 87.22]
 gi|260645045|emb|CBG68131.1| putative DNA polymerase related protein [Streptomyces scabiei
           87.22]
          Length = 227

 Score =  124 bits (311), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 67/171 (39%), Gaps = 13/171 (7%)

Query: 81  KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML 140
           +        C L   +  T+         L+++G  P D ++  G+PF G  G +L + L
Sbjct: 31  RRAAADCRGCPLWEHATQTVFGKGDAAARLLLVGEQPGDREDRQGEPFVGPAGRLLRRAL 90

Query: 141 QSIEIMRTQIHISMISPW----------HPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
           +   I     +++                   ++     E+  CRP ++ ++ L+ P+++
Sbjct: 91  EEAGIDMDTAYVTNAVKHFKSTRPPGGGRRRIHQAPDLREVAACRPWLLAELRLVRPEVV 150

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS--IIPTLATVHPQELIQ 239
           + +G            +   ++ G   +L +  +      +AT+HP  +++
Sbjct: 151 VVLGATAGRALLGPSFRV-TRDRGALLSLPSEGTEAGPRVVATLHPSAVLR 200


>gi|209545310|ref|YP_002277539.1| Uracil-DNA glycosylase superfamily [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209532987|gb|ACI52924.1| Uracil-DNA glycosylase superfamily [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 428

 Score =  124 bits (311), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 81/241 (33%), Gaps = 17/241 (7%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P   A        +S +     +         L         +  SL  L +  R    C
Sbjct: 185 PPGTAPSALPTDRESWEGTGLTLRPADLPRPALRLTEGLDIARIDSLPALIAAARDCLIC 244

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150
            +   +  T+ +    G  LM++G  P D ++  G+PF G  G +LD+ L    I R  +
Sbjct: 245 AMARQTTQTVFSDGRPGAALMLVGEQPGDQEDRVGRPFVGPAGQLLDRALHEARITRDAV 304

Query: 151 HISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
           +++                +   +   +  C P +  +  +++P++L+ +G         
Sbjct: 305 YVTNAVKHFRFQRRGTRRLHEKPTVENVTACAPWLAAERRIVAPRVLVMLGATAAGAVLG 364

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH------ALITLKKA 257
             +    +   +   L    +    L TVHP  L++ P     T         L   +  
Sbjct: 365 -RSVTIGRERSRPIPLADGSTG---LVTVHPSFLLRQPDEDARTREYARFVADLRLARDL 420

Query: 258 L 258
           L
Sbjct: 421 L 421


>gi|326387893|ref|ZP_08209499.1| uracil-DNA glycosylase superfamily protein [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326207939|gb|EGD58750.1| uracil-DNA glycosylase superfamily protein [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 475

 Score =  124 bits (311), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 34/248 (13%), Positives = 78/248 (31%), Gaps = 19/248 (7%)

Query: 24  VYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSL 83
           V  +  E                +           + +     A        +L +L++ 
Sbjct: 234 VGAMVKEMPRRYWKNLPEAALIPELVATAQAREAAMVALGGNDAP---PAPETLADLEAA 290

Query: 84  LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143
           + +   C +       +     +   +MI+G  P D +   G+PF G  G +L     + 
Sbjct: 291 VGACRRCAIGCNGTRAVAGEGPDRARVMIVGEQPGDCEERDGRPFIGPAGQVLRSCADAA 350

Query: 144 EIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            +    + ++                ++N S  E++ CR  +  +  +++P+++L +G  
Sbjct: 351 GLDLASVRLTNAVRHFRFVARGKVRLHQNPSAREIDTCRWWLDAERRIVAPRLVLALGAS 410

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ-----YPLIKKNTWHAL 251
                         +  G +  L         L T HP  L++         ++     L
Sbjct: 411 AARAVLGRTVAVQ-KERGVFLPL---DDGADLLITAHPSYLLRLGDKARAEEERRFTADL 466

Query: 252 ITLKKALK 259
             L + + 
Sbjct: 467 AMLARRIA 474


>gi|170744654|ref|YP_001773309.1| uracil-DNA glycosylase superfamily protein [Methylobacterium sp.
           4-46]
 gi|168198928|gb|ACA20875.1| Uracil-DNA glycosylase superfamily [Methylobacterium sp. 4-46]
          Length = 493

 Score =  124 bits (310), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 79/233 (33%), Gaps = 18/233 (7%)

Query: 41  RKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI 100
              + + + I+    +    +P        AQ    L  L +L+R      L   +   +
Sbjct: 263 NARRRVAAMIEREPAMPRKRTPTRALDAMAAQGPEDLEALNALIRRSE--PLVPGATQAV 320

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160
                 G  +  +G  P D ++  G+PF G  G +L + ++   + R   +++       
Sbjct: 321 LGEGPVGAAIAFVGEQPGDQEDRLGRPFVGPAGQLLTRAMEEAGLARGSCYLTNAVKHFK 380

Query: 161 PG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL 213
                    ++  +  E+   R  + R++  + P++++ +G           A    +  
Sbjct: 381 FEERGKRRIHQKPTAGEVAHGRWWLDRELGFVHPRLVVALGATAVLALTG-KAIPITRAR 439

Query: 214 GKWSNLCTPHSIIPTLATVHPQELIQYP-LIKKNTW----HALITLKKALKNL 261
           G                TVHP  L++ P   K   +      L  ++   + L
Sbjct: 440 G---PARFDGKPYAGFVTVHPSYLLRLPEEAKAEAYAGFVDDLRRVRMLAQEL 489


>gi|86157607|ref|YP_464392.1| phage SPO1 DNA polymerase-like protein [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|85774118|gb|ABC80955.1| phage SPO1 DNA polymerase-related protein [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 224

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 74/188 (39%), Gaps = 11/188 (5%)

Query: 58  HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117
              +P    A  +  +  +L  L+        C L      T+         +M++G  P
Sbjct: 2   PRRAPPGGTAAPLVPRRATLPALRRAAAGCTACPLWERGTQTVFGAGAPRATVMLVGEQP 61

Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRNLSNIE 170
            + ++ +G+PF G  G +LD+ L +  + R   +++                ++  S  E
Sbjct: 62  GNDEDRAGEPFVGPAGRLLDRALAAAGLDRRDAYVTNAVKHFKWEPRGKRRIHQKPSAGE 121

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230
           +  C P +  ++  + P+ ++ +G             +  +  G+   + +P + I  +A
Sbjct: 122 VRACLPWLEAELAAVRPRAVVCLGATAAQALLG-RGFRLTERRGQ--PVPSPLAEI-VVA 177

Query: 231 TVHPQELI 238
           T+HP  ++
Sbjct: 178 TLHPSAVL 185


>gi|163733270|ref|ZP_02140714.1| uracil-DNA glycosylase, putative [Roseobacter litoralis Och 149]
 gi|161393805|gb|EDQ18130.1| uracil-DNA glycosylase, putative [Roseobacter litoralis Och 149]
          Length = 477

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 72/209 (34%), Gaps = 11/209 (5%)

Query: 38  ESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL 97
            +  +     +   P      I +   QQA   +        L   +     C L  T+ 
Sbjct: 243 ATAPERARQMALAAPTLPPARIGAIQAQQASYESVWDGPPGSLPQAIAGCTRCPLHKTAT 302

Query: 98  STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP 157
             +         LMI+G  P D +++ G+PF G  G + D++   + + R Q+ I+    
Sbjct: 303 QAVPGEGPIDARLMIVGEQPGDQEDLIGRPFVGPAGQLFDRIAADVGLDRGQVFITNAVK 362

Query: 158 W-------HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210
                       ++  +  E+  C+  +  ++  ++P  L+     T         +   
Sbjct: 363 HFKFVPRGRKRIHQRPNQGEVAHCKWWLDAELRQVAP-DLVVAMGATAAAALTGSGKAIS 421

Query: 211 QNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
              G+        + I  L T HP  L++
Sbjct: 422 ARRGRI---EIGQAGISVLITWHPSYLLR 447


>gi|157413095|ref|YP_001483961.1| Uracil-DNA glycosylase [Prochlorococcus marinus str. MIT 9215]
 gi|157387670|gb|ABV50375.1| Uracil-DNA glycosylase [Prochlorococcus marinus str. MIT 9215]
          Length = 167

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 70/168 (41%), Gaps = 11/168 (6%)

Query: 97  LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI-MRTQIHISMI 155
              +    +   DL+IIG  P   +++ GKP+ GK+G +L ++L    I     ++   +
Sbjct: 2   KRLVIGRGSVFADLLIIGEAPGAQEDLEGKPYVGKSGKLLKELLIKAGIDYEADVYFCNV 61

Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK 215
               PP NR  +  E++I +P +++QI+L+ PK +L  G+                  G+
Sbjct: 62  IKCRPPNNRKPTTGEIKIHKPWLLQQIKLVDPKFILLTGSTAMRAILEVK-DSISNLRGQ 120

Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLIK-----KNTWHALITLKKAL 258
           W            +   HP  L+++P  +       T   L  +   L
Sbjct: 121 W----IKKDGREIMVIFHPSYLLRFPSKEINKPYHLTLKDLENVSGKL 164


>gi|254255279|ref|ZP_04948595.1| Uracil-DNA glycosylase [Burkholderia dolosa AUO158]
 gi|124901016|gb|EAY71766.1| Uracil-DNA glycosylase [Burkholderia dolosa AUO158]
          Length = 220

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 74/194 (38%), Gaps = 11/194 (5%)

Query: 57  RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYT 116
           R +      + +S         +  + L +   C L + +   +         +M++G  
Sbjct: 6   RTVKPTSAAERESPRVPDVDPDQQPATLDACRRCPLWANATQGVPGVGPRHAPIMMVGEQ 65

Query: 117 PSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPGNRNLS----NI 169
           P D +++ G PF G  G +LD  L    I R  ++++       W P G R L       
Sbjct: 66  PGDKEDLQGLPFVGPAGALLDDALAEAGIGRGDVYVTNAVKHFKWTPRGKRRLHKTPAQR 125

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E++ CR  + ++++ +   +++ +G         +   +    +GK       H     +
Sbjct: 126 EVDACRYWLDKELDGVGAHVVVALGATALKAVLEDPKSRLQDAIGKV----VRHGDRFVV 181

Query: 230 ATVHPQELIQYPLI 243
           AT HP   ++ P  
Sbjct: 182 ATYHPSFALRAPDA 195


>gi|123968265|ref|YP_001009123.1| Uracil-DNA glycosylase [Prochlorococcus marinus str. AS9601]
 gi|123198375|gb|ABM70016.1| Uracil-DNA glycosylase [Prochlorococcus marinus str. AS9601]
          Length = 167

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 71/168 (42%), Gaps = 11/168 (6%)

Query: 97  LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI-MRTQIHISMI 155
              +    +   DL++IG  P   +++ GKP+ GK+G +L+++L    I  +  ++   +
Sbjct: 2   KRLVIGRGSVFADLLVIGEAPGAQEDLEGKPYVGKSGKLLNELLIQAGIDYKKDVYFCNV 61

Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK 215
               PP NR  +  E+ I +P +++QI+L+ PK +L  G+                  G+
Sbjct: 62  IKCRPPNNRKPTAREINIHKPWLLQQIKLVDPKFILLTGSTAMRAILEVK-DPISNLRGQ 120

Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLIK-----KNTWHALITLKKAL 258
           W            +   HP  L+++P  +       T   L  +   L
Sbjct: 121 W----IKKDGREIMVIFHPSYLLRFPSKEINKPYHLTLKDLENVSGKL 164


>gi|53723251|ref|YP_112236.1| DNA glycosylase [Burkholderia pseudomallei K96243]
 gi|126442562|ref|YP_001064135.1| uracil-DNA glycosylase [Burkholderia pseudomallei 668]
 gi|237507691|ref|ZP_04520406.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei
           MSHR346]
 gi|52213665|emb|CAH39719.1| putative DNA glycosylase [Burkholderia pseudomallei K96243]
 gi|126222053|gb|ABN85558.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 668]
 gi|234999896|gb|EEP49320.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei
           MSHR346]
          Length = 218

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 80/206 (38%), Gaps = 20/206 (9%)

Query: 53  ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMI 112
             + R  HSP  ++A        +L        +   C L   +   +         +M+
Sbjct: 2   ARDARAAHSPRRRRAADDDDAPQTLD-------ACRRCGLWEHATQAVPGAGPPRAAIML 54

Query: 113 IGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRN 165
           +G  P + ++  G PF G  G +L++ L +  + R  ++++                ++ 
Sbjct: 55  VGEQPGNQEDREGAPFVGPAGRVLERALAAAGLDRASVYVTNAVKHFKWAPRGKRRMHKT 114

Query: 166 LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI 225
            +  E++ CR  + R+++ + P++++ +G        ++   +    +G    +      
Sbjct: 115 PAQQEIDACRYWLERELDALGPRVVVALGAIALKAVLDDRHARLQSAMG----VVQSAGG 170

Query: 226 IPTLATVHPQELIQ--YPLIKKNTWH 249
              +AT HP  +++   P  +K  + 
Sbjct: 171 RYVIATYHPSFVLRVPDPDARKRAYA 196


>gi|254526412|ref|ZP_05138464.1| uracil-DNA glycosylase [Prochlorococcus marinus str. MIT 9202]
 gi|221537836|gb|EEE40289.1| uracil-DNA glycosylase [Prochlorococcus marinus str. MIT 9202]
          Length = 167

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 70/168 (41%), Gaps = 11/168 (6%)

Query: 97  LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI-MRTQIHISMI 155
              +    +   DL+IIG  P   +++ GKP+ GK+G +L+++L    I     ++   +
Sbjct: 2   KRLVIGRGSVFADLLIIGEAPGAQEDLEGKPYVGKSGKLLNELLIQAGIDYEKDVYFCNV 61

Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK 215
               PP NR  +  E+ I +P +++QI+L+ PK +L  G+                  G+
Sbjct: 62  IKCRPPNNRKPTVREINIHKPWLLQQIKLVDPKFILLTGSTAMRAILEVK-DPISNLRGQ 120

Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLIK-----KNTWHALITLKKAL 258
           W            +   HP  L+++P  +       T   L  +   L
Sbjct: 121 W----IKKDGREIMVIFHPSYLLRFPSKEINKPYHLTLKDLENVSGKL 164


>gi|170749939|ref|YP_001756199.1| uracil-DNA glycosylase superfamily protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170656461|gb|ACB25516.1| Uracil-DNA glycosylase superfamily [Methylobacterium radiotolerans
           JCM 2831]
          Length = 493

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 80/226 (35%), Gaps = 16/226 (7%)

Query: 48  SAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEG 107
           + I+    +     P    A    Q   +L EL +++R      L   +   +      G
Sbjct: 270 AMIEREPTMPTRREPARAVAAMADQDPKTLEELNAIIRRTE--PLVPGATQAVLGEGPVG 327

Query: 108 QDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG----- 162
             +  +G  P D ++  G+PF G  G +L + +    I R   +++              
Sbjct: 328 ATVAFVGEQPGDQEDRQGRPFVGPAGQLLSRAMAEAGIDRGASYLTNAVKHFKFEERGKR 387

Query: 163 --NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220
             ++  +  E+   R  + R++E + PK+++ +G           A    +  G +    
Sbjct: 388 RIHQKPTAGEVSHYRWWLDRELEFVGPKLVVALGATAVLALTG-KAIPITRARGPFRFDR 446

Query: 221 TPHSIIPTLATVHPQELIQYP-LIKKNTW----HALITLKKALKNL 261
             +       TVHP  L++ P   K   +      L  ++   + L
Sbjct: 447 HDNR-FQGFITVHPSYLLRLPDEAKAEAYAAFVDDLRRVEALGREL 491


>gi|126696066|ref|YP_001090952.1| Uracil-DNA glycosylase [Prochlorococcus marinus str. MIT 9301]
 gi|126543109|gb|ABO17351.1| Uracil-DNA glycosylase [Prochlorococcus marinus str. MIT 9301]
          Length = 167

 Score =  123 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 71/168 (42%), Gaps = 11/168 (6%)

Query: 97  LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI-MRTQIHISMI 155
              +    +   DL+IIG  P   +++ GKP+ GK+G +L+++L    I  +  ++   +
Sbjct: 2   KRLVIGRGSVFADLLIIGEAPGAQEDLEGKPYVGKSGKLLNELLIQAGIDYKKDVYFCNV 61

Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK 215
               PP NR  +  E+ I +P +++QI+L+ PK +L  G+                  G+
Sbjct: 62  IKCRPPNNRKPTAREINIHKPWLLQQIKLVDPKFILLTGSTAMRAILEVK-DPISNLRGQ 120

Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLIK-----KNTWHALITLKKAL 258
           W            +   HP  L+++P  +       T   L  +   L
Sbjct: 121 W----IKQDGREIMIIFHPSYLLRFPSKEINKPYHLTLKDLENVSDRL 164


>gi|167829772|ref|ZP_02461243.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 9]
          Length = 232

 Score =  123 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 81/221 (36%), Gaps = 20/221 (9%)

Query: 38  ESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL 97
                      A     + R  HSP  ++A        +L        +   C L   + 
Sbjct: 1   HRPAPPGVGVKARHMARDARAAHSPRRRRAADDDDAPQTLD-------ACRRCGLWEHAT 53

Query: 98  STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP 157
             +         +M++G  P + ++  G PF G  G +L++ L +  + R  ++++    
Sbjct: 54  QAVPGAGPPRAAIMLVGEQPGNQEDREGAPFVGPAGRVLERALAAAGLDRASVYVTNAVK 113

Query: 158 WH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210
                       ++  +  E++ CR  + R+++ + P++++ +G        ++   +  
Sbjct: 114 HFKWAPRGKRRMHKTPAQQEIDACRYWLERELDALEPRVVVALGAIALKAVLDDRHARLQ 173

Query: 211 QNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKKNTWH 249
             +G    +         +AT HP  +++   P  +K  + 
Sbjct: 174 PAMG----VVQSAGGRYVIATYHPSFVLRVPDPDARKRAYA 210


>gi|240170457|ref|ZP_04749116.1| uracil DNA glycosylase superfamily protein [Mycobacterium kansasii
           ATCC 12478]
          Length = 222

 Score =  122 bits (307), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 41/214 (19%), Positives = 80/214 (37%), Gaps = 17/214 (7%)

Query: 59  IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPS 118
             +P    A  +  +   L  L+   RS   C L + +  T+    T    LM++G  P 
Sbjct: 2   TTAPAAGAARYLPDE-RELTLLEDAARSCRGCALYADAARTVFGHGTCDAPLMLVGEQPG 60

Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPG----NRNLSNIEM 171
           D ++  G PF G  G +L + L    I     + +       +   G    ++  S  E+
Sbjct: 61  DREDQEGLPFVGPAGRLLQRALDDAGIDPGLTYQTNAVKHFKFRRQGKRRIHQKPSRTEV 120

Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP---- 227
             CRP ++ +IE + P++++ +G         +  + T     +     T    +     
Sbjct: 121 VACRPWLIAEIEAVRPQLIVCLGATAAQSLLGSAFRVTAHRGERLRLSATLRVAVNPEPL 180

Query: 228 TLATVHPQELIQYPLIKK-----NTWHALITLKK 256
             ATVHP  +++    ++          L + + 
Sbjct: 181 VTATVHPSAVLRDRSERRGEAYTLFVEDLKSARA 214


>gi|254182537|ref|ZP_04889131.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 1655]
 gi|184213072|gb|EDU10115.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 1655]
          Length = 218

 Score =  122 bits (307), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 80/206 (38%), Gaps = 20/206 (9%)

Query: 53  ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMI 112
             + R  HSP  ++A        +L        +   C L   +   +         +M+
Sbjct: 2   ARDARAAHSPRRRRAADDDDAPQTLD-------ACRRCGLWEHATQAVPGAGPPRAAIML 54

Query: 113 IGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRN 165
           +G  P + ++  G PF G  G +L++ L +  + R  ++++                ++ 
Sbjct: 55  VGEQPGNQEDREGAPFVGPAGRVLERALAAAGLDRASVYVTNAVKHFKWAPRGKRRMHKT 114

Query: 166 LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI 225
            +  E++ CR  + R+++ + P++++ +G        ++   +    +G    +      
Sbjct: 115 PAQQEIDACRYWLERELDALGPRVVVALGAIALKAVLDDRHARLQPAMG----VVQSAGG 170

Query: 226 IPTLATVHPQELIQ--YPLIKKNTWH 249
              +AT HP  +++   P  +K  + 
Sbjct: 171 RYVIATYHPSFVLRVPDPDARKRAYA 196


>gi|117927329|ref|YP_871880.1| phage SPO1 DNA polymerase-related protein [Acidothermus
           cellulolyticus 11B]
 gi|117647792|gb|ABK51894.1| phage SPO1 DNA polymerase-related protein [Acidothermus
           cellulolyticus 11B]
          Length = 217

 Score =  122 bits (307), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 84/218 (38%), Gaps = 22/218 (10%)

Query: 60  HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSD 119
            +     A  +   A  L EL+   R    C L   +  T+ ++      ++++G  P D
Sbjct: 2   TADYPGAARWVPTGAG-LDELRRAARGCQGCPLYRNATQTVFSSGPPTARIVLVGEQPGD 60

Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPG------NRNLSNIE 170
            ++  G PF G  GN+LD+ L+ + I R   +++       +   G      ++     E
Sbjct: 61  QEDRRGAPFVGPAGNILDRALEEVGIDRAAAYVTNAVKHFKFRQDGPGARRIHQTPDQRE 120

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT-- 228
           +  CRP +  ++ ++ P I++ +G       F  D +   +  G       P        
Sbjct: 121 ITACRPWLAAELAIVDPDIIVALGATAGRALFGPDFRVN-RTRGALLPWPAPPHEDAVRV 179

Query: 229 ----LATVHPQELIQYPLIKKNTWH----ALITLKKAL 258
               LAT+HP  +++    ++  +      L    + L
Sbjct: 180 NKFFLATIHPSAVLRA-DDREAAYQGLVADLRLAAEVL 216


>gi|134281821|ref|ZP_01768528.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 305]
 gi|226194144|ref|ZP_03789744.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei
           Pakistan 9]
 gi|134246883|gb|EBA46970.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 305]
 gi|225933837|gb|EEH29824.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei
           Pakistan 9]
          Length = 218

 Score =  122 bits (307), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 80/206 (38%), Gaps = 20/206 (9%)

Query: 53  ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMI 112
             + R  HSP  ++A        +L        +   C L   +   +         +M+
Sbjct: 2   ARDARAAHSPRRRRAADDDDAPQTLD-------ACRRCGLWEHATQAVPGAGPPRAAIML 54

Query: 113 IGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRN 165
           +G  P + ++  G PF G  G +L++ L +  + R  ++++                ++ 
Sbjct: 55  VGEQPGNQEDREGAPFVGPAGRVLERALAAAGLDRASVYVTNAVKHFKWAPRGKRRMHKT 114

Query: 166 LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI 225
            +  E++ CR  + R+++ + P++++ +G        ++   +    +G    +      
Sbjct: 115 PAQQEIDACRYWLERELDALEPRVVVALGAIALKAVLDDRHARLQPAMG----VVQSAGG 170

Query: 226 IPTLATVHPQELIQ--YPLIKKNTWH 249
              +AT HP  +++   P  +K  + 
Sbjct: 171 RYVIATYHPSFVLRVPDPDARKRAYA 196


>gi|225024342|ref|ZP_03713534.1| hypothetical protein EIKCOROL_01217 [Eikenella corrodens ATCC
           23834]
 gi|224942927|gb|EEG24136.1| hypothetical protein EIKCOROL_01217 [Eikenella corrodens ATCC
           23834]
          Length = 326

 Score =  122 bits (307), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 51/245 (20%), Positives = 86/245 (35%), Gaps = 24/245 (9%)

Query: 27  VFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIA-----------QKAC 75
             ++P    T   Q     + +AI          +P   ++D +A               
Sbjct: 94  APNQPAARTTPPPQGHRADVLAAIATPQPFLPAPAPAESESDPLAVVQWLWAVLPHTAFA 153

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           S  EL+    +   C L S     +         LM+I   P+ SD+ +G+  S + G +
Sbjct: 154 SPEELQRQAAACATCSLHSQRKQALSGYGAMPARLMVISLNPAPSDDETGRLISDRHGRL 213

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           LD ML +I +   Q+  +      P      +  E   C   I ++   + P+ +L +GN
Sbjct: 214 LDNMLAAIGLAPEQVFRTAWLRCTPRIALKTTPEEQVRCAAFIRQEFAWVQPQAVLLLGN 273

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
                                      H+   T+   HP  L++ P +K   WH+L  LK
Sbjct: 274 -----------SFYDPARRWLLEQLIGHTPAFTVP--HPAILLRQPELKAQAWHSLKQLK 320

Query: 256 KALKN 260
            AL  
Sbjct: 321 AALAK 325


>gi|117927565|ref|YP_872116.1| phage SPO1 DNA polymerase-related protein [Acidothermus
           cellulolyticus 11B]
 gi|117648028|gb|ABK52130.1| phage SPO1 DNA polymerase-related protein [Acidothermus
           cellulolyticus 11B]
          Length = 225

 Score =  122 bits (306), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 73/170 (42%), Gaps = 7/170 (4%)

Query: 72  QKACSLHELKSLLRSFHDC-HLCSTSLSTICA-TQTEGQDLMIIGYTPSDSDNISGKPFS 129
               +  +L + +R    C  L +     +        + ++++G  P   ++ +G PF 
Sbjct: 8   AADDAWDQLAAQIRRCRRCAELAANRRHVVVGVRPAVARPVVLVGEAPGAEEDRTGLPFV 67

Query: 130 GKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189
           G+ G +LD++L    + R  + I  +    PPGNR  + +E+  CRP +  Q+ L+ P +
Sbjct: 68  GRAGRLLDELLVDAGLPRATVAIVNVLKCRPPGNRVPNRVEIAACRPWLEAQLALLDPGV 127

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
           ++ +G     +FF        Q  G+   L         + T HP   ++
Sbjct: 128 VVALGGTAVAWFF-ERPVTLAQVRGRVHEL----RGWRVVPTYHPSAALR 172


>gi|56552081|ref|YP_162920.1| Uracil-DNA glycosylase superfamily protein [Zymomonas mobilis
           subsp. mobilis ZM4]
 gi|241762033|ref|ZP_04760117.1| Uracil-DNA glycosylase superfamily [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|56543655|gb|AAV89809.1| Uracil-DNA glycosylase superfamily [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241373499|gb|EER63086.1| Uracil-DNA glycosylase superfamily [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 264

 Score =  122 bits (306), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 49/262 (18%), Positives = 94/262 (35%), Gaps = 17/262 (6%)

Query: 11  QILTIALFYADSGVYWV-FDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQ-QAD 68
              ++  ++  +GV  +  D P N  +           S  + I       + L+  + +
Sbjct: 2   AFKSLLEWWQQAGVDILTQDIPQNWFSKNHPENSLFKPSDNKNIRENNFSKNNLLNFKKN 61

Query: 69  SIAQKACSLHELKSLLRSFHDCHLCST---SLSTICATQTEGQDLMIIGYTPSDSDNISG 125
                A SL  +K++ ++     L          + +       LM++  +P   D   G
Sbjct: 62  EEILSAPSL--IKNIPQNISSFQLWLQNIFGEKCLFSEVKISPKLMVLSESPEAEDMAQG 119

Query: 126 KPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIM------ 179
           + FSGK G +L  ML ++ I +  I+ + +SP     +    +                 
Sbjct: 120 QLFSGKAGRLLHAMLDTLSIKKQDIYFATMSPIVEHIDYVKISSYAAGNSLTFHDYTLIA 179

Query: 180 -RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238
            + I LI P+ LL +G+         +         K   +   +  I   A +HP+ L+
Sbjct: 180 AQHISLIKPRYLLLLGDAPNRALLQMNT---MDARKKIHAITVNNDNIDAFALLHPKMLL 236

Query: 239 QYPLIKKNTWHALITLKKALKN 260
           + P +K   W  L  LK  +  
Sbjct: 237 ETPSLKAIAWKDLRVLKGKIDE 258


>gi|284992827|ref|YP_003411381.1| phage SPO1 DNA polymerase-like protein [Geodermatophilus obscurus
           DSM 43160]
 gi|284066072|gb|ADB77010.1| phage SPO1 DNA polymerase-related protein [Geodermatophilus
           obscurus DSM 43160]
          Length = 207

 Score =  122 bits (306), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 79/209 (37%), Gaps = 11/209 (5%)

Query: 57  RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCH-LCSTSLSTICATQTE--GQDLMII 113
                   ++    A  A     L ++ R    C  L +T    +             ++
Sbjct: 4   PPRFDAAAEEVARTAAAAPDWEALAAVARPCVACPELAATRQHVVVGDVPAGGRPRFALV 63

Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173
           G  P  S++ +G+ F GK+G +LD++L    + R +  +  +    PPGNR     E+  
Sbjct: 64  GEAPGASEDETGRAFVGKSGQLLDRLLVEAGLDRAEAAVLNVVKCRPPGNRTPKASEVAR 123

Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
           C   + RQ++L+ P +++ +G  +  +F         +  G+  ++          AT H
Sbjct: 124 CSGWLRRQLDLLDPPVVVALGLSSAKWFLGPRTVL-AEVRGRAHDV----DGRAVWATYH 178

Query: 234 PQELIQYPLI---KKNTWHALITLKKALK 259
           P   I++      +      L  +   L 
Sbjct: 179 PSAAIRFGPKGTPRAGLLADLTAVAGTLA 207


>gi|167851239|ref|ZP_02476747.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei B7210]
          Length = 177

 Score =  122 bits (306), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 71/175 (40%), Gaps = 13/175 (7%)

Query: 84  LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143
           L +   C L   +   +         +M++G  P + ++  G PF G  G +L++ L + 
Sbjct: 3   LDACRRCGLWEHATQAVPGAGPPRAAIMLVGEQPGNQEDREGAPFVGPAGRVLERALAAA 62

Query: 144 EIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            + R  ++++                ++  +  E++ CR  + R+++ + P++++ +G  
Sbjct: 63  GLDRASVYVTNAVKHFKWAPRGKRRMHKTPAQQEIDACRYWLERELDALGPRVVVALGAI 122

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKKNTWH 249
                 ++   +    +G    +         +AT HP  +++   P  +K  + 
Sbjct: 123 ALKAVLDDRHARLQSAMG----VVQSAGGRYVIATYHPSFVLRVPDPDARKRAYA 173


>gi|315502584|ref|YP_004081471.1| uracil-DNA glycosylase superfamily [Micromonospora sp. L5]
 gi|315409203|gb|ADU07320.1| Uracil-DNA glycosylase superfamily [Micromonospora sp. L5]
          Length = 233

 Score =  122 bits (306), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 77/234 (32%), Gaps = 33/234 (14%)

Query: 58  HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117
                     + I   A ++ EL++       C L   +  T+     E   ++ +G  P
Sbjct: 2   AETESAPGAQEFIPPSADTIDELRAAAGDCRGCELYRDATQTVFGRGDEHARVVFVGEQP 61

Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW-------HPPGNRNLSNIE 170
            D ++  G PF G  G +L K +    +   QI+++                ++    + 
Sbjct: 62  GDIEDQKGLPFVGPAGRLLRKAVDDAALDPAQIYLTNAVKHFRFELRGRRRIHQTPDRVH 121

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT------PHS 224
           +  CRP ++ +   + P+I++ +G            +   +  G+               
Sbjct: 122 VTACRPWLVAEFARLRPEIVVVLGATAAKALLGPSFRV-TKQRGELLPWPAAAQHPEDFE 180

Query: 225 IIPT--------------LATVHPQELIQYPLIKKNTWH----ALITLKKALKN 260
            +P               LAT+HP  +++        +      L    KALK 
Sbjct: 181 RVPVDRTGTVADAPAARLLATIHPSAVLRADNQD-VAYEGLVADLKVAAKALKK 233


>gi|302866024|ref|YP_003834661.1| Uracil-DNA glycosylase superfamily [Micromonospora aurantiaca ATCC
           27029]
 gi|302568883|gb|ADL45085.1| Uracil-DNA glycosylase superfamily [Micromonospora aurantiaca ATCC
           27029]
          Length = 233

 Score =  122 bits (306), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 77/234 (32%), Gaps = 33/234 (14%)

Query: 58  HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117
                     + I   A ++ EL++       C L   +  T+     E   ++ +G  P
Sbjct: 2   AETESAPGAQEFIPPSADTIDELRAAAGDCRGCELYRDATQTVFGRGDEHARVVFVGEQP 61

Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW-------HPPGNRNLSNIE 170
            D ++  G PF G  G +L K +    +   QI+++                ++    + 
Sbjct: 62  GDIEDQKGLPFVGPAGRLLRKAVDDAALDPAQIYLTNAVKHFRFELRGRRRIHQTPDRVH 121

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT------PHS 224
           +  CRP ++ +   + P+I++ +G            +   +  G+               
Sbjct: 122 VTACRPWLVAEFARLRPEIVVVLGATAAKALLGPSFRV-TKQRGELLPWPAAAQHPEDFE 180

Query: 225 IIPT--------------LATVHPQELIQYPLIKKNTWH----ALITLKKALKN 260
            +P               LAT+HP  +++        +      L    KALK 
Sbjct: 181 RVPVDRAGAVADAPAARLLATIHPSAVLRADNQD-VAYEGLVADLKVAAKALKK 233


>gi|260752389|ref|YP_003225282.1| uracil-DNA glycosylase superfamily [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|258551752|gb|ACV74698.1| Uracil-DNA glycosylase superfamily [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 264

 Score =  122 bits (305), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 49/262 (18%), Positives = 93/262 (35%), Gaps = 17/262 (6%)

Query: 11  QILTIALFYADSGVYWV-FDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQ-QAD 68
              ++  ++  +GV  +  D P N  +           S  + I       + L+  + +
Sbjct: 2   AFKSLLEWWQQAGVDILTQDIPQNWFSKNHPENSLFKPSDNKNIRENNFSKNNLLNFKKN 61

Query: 69  SIAQKACSLHELKSLLRSFHDCHLCST---SLSTICATQTEGQDLMIIGYTPSDSDNISG 125
                A SL  +K++ ++     L          + +       LM++  +P   D   G
Sbjct: 62  EEILSAPSL--IKNIPQNISSFQLWLQNIFGEKCLFSEVKISPKLMVLSESPEAEDMAQG 119

Query: 126 KPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIM------ 179
           + FSGK G +L  ML ++ I +  I+ + +SP     +                      
Sbjct: 120 QLFSGKAGRLLHAMLDTLSIKKQDIYFATMSPIVEHIDYVKIWSYAAGNSLTFHDYTLIA 179

Query: 180 -RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238
            + I LI P+ LL +G+         +         K   +   +  I   A +HP+ L+
Sbjct: 180 AQHISLIKPRYLLLLGDAPNRALLQMNT---MDARKKIHAITVNNDNIDAFALLHPKMLL 236

Query: 239 QYPLIKKNTWHALITLKKALKN 260
           + P +K   W  L  LK  +  
Sbjct: 237 ETPSLKAIAWKDLRVLKGKIDE 258


>gi|284028884|ref|YP_003378815.1| Uracil-DNA glycosylase superfamily [Kribbella flavida DSM 17836]
 gi|283808177|gb|ADB30016.1| Uracil-DNA glycosylase superfamily [Kribbella flavida DSM 17836]
          Length = 205

 Score =  122 bits (305), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 73/192 (38%), Gaps = 14/192 (7%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L  +++ L S   C L   +   +         +M++G  P D ++  G+ F G  G +L
Sbjct: 17  LRAVRAALPSCRGCDLWENAEQVVPGDGPARARMMLVGEQPGDVEDKEGQVFVGPAGRLL 76

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKI 189
           DK L    I R  ++++                ++  +   +  C P +  ++ ++ P++
Sbjct: 77  DKALAEAGIERDTVYVTNAVKHFRFEQRGKRRIHKTPAVGHIVACAPWLRSELAVVKPEL 136

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249
           ++ +G+           +   Q+ G+   L          ATVHP  +++    +++   
Sbjct: 137 VVVLGSVAARSLLGTTFKV-TQHRGEPIALP---DGTAATATVHPSSVVRSREYRRDFEL 192

Query: 250 ---ALITLKKAL 258
               L      L
Sbjct: 193 FVTDLRAAAAML 204


>gi|194477280|ref|YP_002049459.1| hypothetical protein PCC_0839 [Paulinella chromatophora]
 gi|171192287|gb|ACB43249.1| hypothetical protein PCC_0839 [Paulinella chromatophora]
          Length = 219

 Score =  122 bits (305), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 46/195 (23%), Positives = 74/195 (37%), Gaps = 11/195 (5%)

Query: 73  KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
           K     +L +     H   + +T L+ + +      +LMII  T  D +     PF+GK 
Sbjct: 26  KIQKFQKLSTAYSQCHKYSISNTGLNVVISRGNPYANLMIIEETTKDENYDGIGPFAGKA 85

Query: 133 GNMLDKMLQSIEIM-RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191
           G +LD+ML SI I       +   +      N  L++ E+   R  +  Q ++I P+I+L
Sbjct: 86  GQLLDRMLSSIGIHANKDAFMCNATKSRSQNNIKLTSREIVNYRQWLEHQTDIIKPRIIL 145

Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK-----N 246
             G        N       +  G W            +  +HP  L++     K      
Sbjct: 146 LAGATAVEGVLNIKGGIQ-RIRGYWYLWE----GYWLMPILHPSYLLRNSSTTKNSPNWL 200

Query: 247 TWHALITLKKALKNL 261
            W  L  +K  LK L
Sbjct: 201 MWRDLQNVKCRLKQL 215


>gi|330466417|ref|YP_004404160.1| uracil-DNA glycosylase superfamily protein [Verrucosispora maris
           AB-18-032]
 gi|328809388|gb|AEB43560.1| uracil-DNA glycosylase superfamily protein [Verrucosispora maris
           AB-18-032]
          Length = 230

 Score =  122 bits (305), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 77/226 (34%), Gaps = 31/226 (13%)

Query: 63  LVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDN 122
                  I  +A +L EL++       C L   +  T+         ++ +G  P D ++
Sbjct: 5   APGAQQFIPPQADTLDELRAAAAGCQGCELYRDASQTVFGRGDATARVVFVGEQPGDMED 64

Query: 123 ISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICR 175
             G PF G  G +L + +   ++    I+++                ++    + +  CR
Sbjct: 65  QKGLPFVGPAGRLLRRAVDDAKLDPGHIYLTNAVKHFRFELRGKRRIHQTPDRVHITACR 124

Query: 176 PIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS------NLCTPHSIIPT- 228
           P ++ +   ++P++++ +G            +   +  G+                +P  
Sbjct: 125 PWLVAEFTQLNPQVIVVLGATAAKALLGPSFRV-TRQRGELLPWPAAAEHPEDFQRVPVD 183

Query: 229 -------------LATVHPQELIQYPLIKKNTW---HALITLKKAL 258
                        LAT+HP  +++     K        L   ++AL
Sbjct: 184 SAGDTTDAPPTQLLATIHPSAVLRADDQDKAYEGLVADLTVAERAL 229


>gi|221211852|ref|ZP_03584830.1| uracil-DNA glycosylase, family 4 [Burkholderia multivorans CGD1]
 gi|221167937|gb|EEE00406.1| uracil-DNA glycosylase, family 4 [Burkholderia multivorans CGD1]
          Length = 258

 Score =  121 bits (304), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 78/198 (39%), Gaps = 12/198 (6%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELK-SLLRSFHDCHLCSTSLSTICATQTEGQD 109
                     +  + +A S +    +  + + + L +   C L   +   +  T      
Sbjct: 27  ARAPRAGMRSACAMTRASSASGADDTPDDQRPATLDACRRCGLWEHATQPVPGTGPRHAS 86

Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPGNRNL 166
           ++++G  P D ++ +G PF G  G++LD+ L +  I R  ++++       W P G R L
Sbjct: 87  IVLVGEQPGDQEDRTGVPFVGAAGHVLDRALDAAGIDRRSVYLTNAVKHFKWEPRGKRRL 146

Query: 167 S----NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP 222
                  E+  CR  + R++E + P++++ +G         ++     +           
Sbjct: 147 HKTPAQREITACRYWLDRELESVHPRVIVALGGTALRAVLQDNDATLQRTPMPTRTAQ-- 204

Query: 223 HSIIPTLATVHPQELIQY 240
                 +AT HP  +++ 
Sbjct: 205 --GYLVVATYHPSYVLRT 220


>gi|33861232|ref|NP_892793.1| Uracil-DNA glycosylase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|33639964|emb|CAE19134.1| Uracil-DNA glycosylase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 167

 Score =  121 bits (304), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 39/171 (22%), Positives = 72/171 (42%), Gaps = 11/171 (6%)

Query: 97  LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMI 155
              + +      +L+IIG  P   +++ G+P+ G++G +LD++L    I   +  +   +
Sbjct: 2   KRLVISRGNVFANLLIIGEAPGALEDLEGEPYVGRSGKLLDELLIEAGIDLQKDVYFCNV 61

Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK 215
               PP NR  +N E+ I +P +M+QI+L+ PK ++  G+               +  GK
Sbjct: 62  IKCRPPNNRKPTNKEINIHKPWLMQQIKLVDPKFIILTGSTAMRTILEIK-NPISKTRGK 120

Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLI---KK--NTWHALITLKKALKNL 261
           W            +   HP  L+++      K    T   L  +   L  L
Sbjct: 121 WF----KKGGREIITIFHPSYLLRFSSKDVEKPYDLTLKDLKKVSSKLYAL 167


>gi|188581515|ref|YP_001924960.1| Uracil-DNA glycosylase superfamily [Methylobacterium populi BJ001]
 gi|179345013|gb|ACB80425.1| Uracil-DNA glycosylase superfamily [Methylobacterium populi BJ001]
          Length = 485

 Score =  121 bits (304), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 74/229 (32%), Gaps = 20/229 (8%)

Query: 41  RKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI 100
                  + I+    +     P+   A     +  +L  L +++       L   +   +
Sbjct: 261 AASARAQAMIEKEPTMPAKRDPVRAVAKMSQDEPETLDALNAIIARSE--PLVPGATQAV 318

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160
                 G  +  +G  P D ++  G+PF G  G +L + L+   I R + +++       
Sbjct: 319 LGEGPVGARIAFVGEQPGDQEDRQGRPFVGPAGQLLSRALEEAGIDRREAYLTNAVKHFK 378

Query: 161 PG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL 213
                    +   +  E+   R  + R++  ++PK+++ +G                +  
Sbjct: 379 FTLRGKRRIHEKPTAGEVSHYRWWLDRELGFVAPKLVVALGATAVLALTG-KQIPITRAR 437

Query: 214 GKWSNLCTPHSIIPTLATVHPQELIQYPLI------KKNTWHALITLKK 256
           G                TVHP  L++ P         +     L  ++ 
Sbjct: 438 GP----ADFGRPFEGFITVHPSYLLRLPDEAAKAAAYQAFVEDLRRVQA 482


>gi|73538225|ref|YP_298592.1| Phage SPO1 DNA polymerase-related protein [Ralstonia eutropha
           JMP134]
 gi|72121562|gb|AAZ63748.1| Phage SPO1 DNA polymerase-related protein [Ralstonia eutropha
           JMP134]
          Length = 207

 Score =  121 bits (304), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 62/171 (36%), Gaps = 11/171 (6%)

Query: 81  KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML 140
           +  + +   C L   +   +         LM++G  P + +++ G+PF G  G +L + L
Sbjct: 15  REEVNACRRCPLWHDATQGVPGAGPTSAKLMLVGEQPGNEEDLQGEPFVGPAGRLLSEAL 74

Query: 141 QSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFI 193
           +   + R  ++++                ++    +E+E C   + ++I  + P +++ +
Sbjct: 75  ERAGLERHDVYLTNAVKHFKFQLRGKRRLHKTPGQLEVEACGIWLEQEIRAVEPTVIVAL 134

Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK 244
           G                       +          +AT HP  +++    +
Sbjct: 135 GATATGAVLGKKRVALS----TLMDAPVEREGRIVVATYHPSFVLRQRSEE 181


>gi|319787262|ref|YP_004146737.1| phage SPO1 DNA polymerase-related protein [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317465774|gb|ADV27506.1| phage SPO1 DNA polymerase-related protein [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 219

 Score =  121 bits (303), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 83/218 (38%), Gaps = 17/218 (7%)

Query: 56  IRHIHSPLVQQADSIAQKAC-----SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
            R      V+QA  +A+        SL  L+        C L   +  T+         +
Sbjct: 2   PRKDDPERVEQAPRLARPVDEVPQGSLSALRREAAGCRRCPLWRPATQTVFGAGPARAQV 61

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------N 163
           +++G  P D +++ GKPF G  G +L K L    +    ++++                +
Sbjct: 62  LLVGEQPGDREDLEGKPFVGPAGQLLRKALVEAGLAPQSLYLTNTVKHFKFQPRGKRRLH 121

Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH 223
           +  +  E   CRP +  +++ I+P I++ +G       F     +     G+W  L    
Sbjct: 122 QRANAAEQAACRPWLAAELDRINPDIVVALGAMAAQTLFGP-GFRLTHQRGQWQRL---G 177

Query: 224 SIIPTLATVHPQELIQYPLIKKN-TWHALITLKKALKN 260
                LAT HP  +++    ++   +  L+   + L +
Sbjct: 178 PHTQALATWHPSAILRMRSPEREAAYAQLLADLRRLHD 215


>gi|226363278|ref|YP_002781060.1| uracil-DNA glycosylase [Rhodococcus opacus B4]
 gi|226241767|dbj|BAH52115.1| putative uracil-DNA glycosylase [Rhodococcus opacus B4]
          Length = 223

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 72/196 (36%), Gaps = 13/196 (6%)

Query: 60  HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSD 119
                  A         L +L         C L   +  T+    +    +M++G  P D
Sbjct: 2   SRATKPSAAPFVPDTVDLDKLSHAAEGCRGCDLYRDAGQTVFGAGSRSARMMLVGEQPGD 61

Query: 120 SDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH---------PPGNRNLSNIE 170
            ++ +G+PF G  G +L+K L + +I R   +++                  ++  +  E
Sbjct: 62  QEDRAGEPFVGPAGKLLNKALDAADIDRDLTYVTNAVKHFKFIPAERGKRRIHKKPNRTE 121

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP---HSIIP 227
           +  CRP ++ ++  + P +L+ +G            + T    G+  +L           
Sbjct: 122 IVACRPWLIAELAAVQPDVLVCLGATAAQALLGPSFRLTEH-HGELLHLDGEVDVDVDPD 180

Query: 228 TLATVHPQELIQYPLI 243
             AT+HP  +++ P  
Sbjct: 181 VFATIHPSAVLRGPSA 196


>gi|298707566|emb|CBJ30150.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 342

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 76/187 (40%), Gaps = 16/187 (8%)

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI-MRTQ 149
            L       +         LM+IG  P   ++  G PF G++G +LD ML+++      +
Sbjct: 153 PLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFVGRSGQLLDDMLRAVGFDPERE 212

Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209
           +++S I    P  NR  +  EM+   P ++ +I L+ P +++ +G  +       + +  
Sbjct: 213 VYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPHVIVLLGASSTKALLPYETRGI 272

Query: 210 YQNLGKWSN-------LCTPHSIIPTLATVHPQELIQYPLIKKN--------TWHALITL 254
            +  G+W++            + +  +   HP  L++    +            + L  +
Sbjct: 273 TRARGQWADPVALAEIHGGRLADMLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLREV 332

Query: 255 KKALKNL 261
           +  ++ +
Sbjct: 333 RDVVRGI 339


>gi|161522495|ref|YP_001585424.1| phage SPO1 DNA polymerase-related protein [Burkholderia multivorans
           ATCC 17616]
 gi|189348630|ref|YP_001941826.1| bacteriophage-type DNA polymerase [Burkholderia multivorans ATCC
           17616]
 gi|160346048|gb|ABX19132.1| phage SPO1 DNA polymerase-related protein [Burkholderia multivorans
           ATCC 17616]
 gi|189338768|dbj|BAG47836.1| bacteriophage-type DNA polymerase [Burkholderia multivorans ATCC
           17616]
          Length = 219

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 76/184 (41%), Gaps = 12/184 (6%)

Query: 65  QQADSIAQKACSLHELK-SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123
            +A S +    +  + + + L +   C L   +   +  T      ++++G  P D ++ 
Sbjct: 2   TRASSASGADDTPDDQRPATLDACRRCGLWEHATQPVPGTGPRHASIVLVGEQPGDQEDR 61

Query: 124 SGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPGNRNLS----NIEMEICRP 176
           +G PF G  G++LD+ L +  I R  ++++       W P G R L       E+  CR 
Sbjct: 62  TGVPFVGAAGHVLDRALDAAGIDRRSVYLTNAVKHFKWEPRGKRRLHKTPAQREITACRY 121

Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236
            + R++E + P++++ +G         ++     +                 +AT HP  
Sbjct: 122 WLDRELESVHPRVIVALGGTALRAVLQDNDATLQRTPTPTRTAQ----GYLVVATYHPSY 177

Query: 237 LIQY 240
           +++ 
Sbjct: 178 VLRT 181


>gi|307725694|ref|YP_003908907.1| Uracil-DNA glycosylase superfamily [Burkholderia sp. CCGE1003]
 gi|307586219|gb|ADN59616.1| Uracil-DNA glycosylase superfamily [Burkholderia sp. CCGE1003]
          Length = 221

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 79/221 (35%), Gaps = 20/221 (9%)

Query: 53  ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMI 112
            T  R   S    + ++ A       +  + L +   C L   +   +     +   +M+
Sbjct: 2   ATTRRTAKSTPAAEGETAASPEVHPDQQPATLDACRRCALWVNATQGVPGAGPKRAPIMM 61

Query: 113 IGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRN 165
           +G  P D ++++G PF G  G +LD  L    + R +++++                ++ 
Sbjct: 62  VGEQPGDKEDLAGLPFVGPAGALLDDALAEAGVARKEVYVTNAVKHFKWTPRGKRRMHKT 121

Query: 166 LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI 225
            +  E++ CR  + R++E +   +++ +G         +   +   ++G        H  
Sbjct: 122 PAQREVDACRYWLERELENVGAHVIVALGATALKAVLEDPKSRLQDSIGTVIE----HGD 177

Query: 226 IPTLATVHPQELIQYPL----IKKN-----TWHALITLKKA 257
              +AT HP   ++ P      +              L + 
Sbjct: 178 RLVVATYHPSFALRAPDPETRQRAYAAIVAALQDAKKLAQR 218


>gi|302528267|ref|ZP_07280609.1| DNA polymerase [Streptomyces sp. AA4]
 gi|302437162|gb|EFL08978.1| DNA polymerase [Streptomyces sp. AA4]
          Length = 205

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 79/189 (41%), Gaps = 10/189 (5%)

Query: 63  LVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDN 122
             Q+  +      SL +L+   R    C L   + +T+     +  D+  +G  P D ++
Sbjct: 3   ARQEPGAEPPDTTSLGKLREAARECRGCGLYRDATATVFGEGPQRADIFALGEQPGDQED 62

Query: 123 ISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICR 175
             G+PF G  G +LDK L    + R  ++++                +   +  E+  CR
Sbjct: 63  QRGEPFVGPAGRLLDKALADAGLDRDSLYVTNAVKHFKFKLRGKRRIHEKPARSEVVACR 122

Query: 176 PIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP--TLATVH 233
           P ++ ++  + P+++L +G       +    +   ++ G+  +     + +    +ATVH
Sbjct: 123 PWLVAELRAVQPRLVLLLGATAAQSVYGTSFRL-TRHRGERLDPPEEFADLFASAVATVH 181

Query: 234 PQELIQYPL 242
           P  +++ P 
Sbjct: 182 PSAVLRAPD 190


>gi|257386782|ref|YP_003176555.1| phage SPO1 DNA polymerase-related protein [Halomicrobium mukohataei
           DSM 12286]
 gi|257169089|gb|ACV46848.1| phage SPO1 DNA polymerase-related protein [Halomicrobium mukohataei
           DSM 12286]
          Length = 195

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/169 (23%), Positives = 71/169 (42%), Gaps = 3/169 (1%)

Query: 83  LLRSFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
            +     C  L  +    +  T     DL+ +G  P   ++  G+PF G++G++LD  L+
Sbjct: 8   QVTDCERCGDLVDSRSRIVDGTGPPEADLLFVGEAPGAQEDADGEPFVGRSGDVLDDALR 67

Query: 142 SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
              + R  + I+      PP NR+    E+  CRP + R+IEL+ P++++ +G       
Sbjct: 68  EAGLDRGDVRITNCVRCRPPDNRDPRQAELANCRPYLEREIELVDPELIVTLGKVPAEHL 127

Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
              D   T +  G   +          L +VHP   +       +T+  
Sbjct: 128 LERDVAVTSEA-GDVFDPEIGGQRRELLVSVHPAATLYDRSQ-ADTFDD 174


>gi|167821429|ref|ZP_02453109.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 91]
          Length = 206

 Score =  121 bits (302), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 71/175 (40%), Gaps = 13/175 (7%)

Query: 84  LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143
           L +   C L   +   +         +M++G  P + ++  G PF G  G +L++ L + 
Sbjct: 14  LDACRRCGLWEHATQAVPGAGPPRAAIMLVGEQPGNQEDREGAPFVGPAGRVLERALAAA 73

Query: 144 EIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            + R  ++++                ++  +  E++ CR  + R+++ + P++++ +G  
Sbjct: 74  GLDRASVYVTNAVKHFKWAPRGKRRMHKTPAQQEIDACRYWLERELDALGPRVVVALGAI 133

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKKNTWH 249
                 ++   +    +G    +         +AT HP  +++   P  +K  + 
Sbjct: 134 ALKAVLDDRHARLQSAMG----VVQSAGGRYVIATYHPSFVLRVPDPDARKRAYA 184


>gi|123965983|ref|YP_001011064.1| Uracil-DNA glycosylase [Prochlorococcus marinus str. MIT 9515]
 gi|123200349|gb|ABM71957.1| Uracil-DNA glycosylase [Prochlorococcus marinus str. MIT 9515]
          Length = 167

 Score =  121 bits (302), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 75/171 (43%), Gaps = 11/171 (6%)

Query: 97  LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMI 155
              + +      +L+IIG  P   +++ GKP+ GK+G +L+++L    I      +   +
Sbjct: 2   KRLVISRGNVFANLLIIGEAPGAQEDLEGKPYVGKSGKLLNELLIEAGIDFQNDAYFCNV 61

Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK 215
               PP NR  +N E+ I +P +++QI+++ PK ++  G+           +   +  GK
Sbjct: 62  IKCRPPNNRKPTNTEINIHKPWLLQQIKIVDPKFIILTGSTAMRTILEIK-EPISKLRGK 120

Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLIK-----KNTWHALITLKKALKNL 261
           W      +     ++  HP  L+++   +       T   L  + + L  L
Sbjct: 121 W----IKNDGREIISIFHPSYLLRFSSKEVGKPYDLTLKDLKNVSRKLYAL 167


>gi|153011615|ref|YP_001372829.1| phage SPO1 DNA polymerase-related protein [Ochrobactrum anthropi
           ATCC 49188]
 gi|151563503|gb|ABS17000.1| phage SPO1 DNA polymerase-related protein [Ochrobactrum anthropi
           ATCC 49188]
          Length = 207

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 71/181 (39%), Gaps = 12/181 (6%)

Query: 66  QADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISG 125
              +I ++  +L ++ +  R+   C L   +  T+      G  +  +   P D ++I G
Sbjct: 2   TVPAITRRQQNLEQVCAEARTCRRCELYQNATQTVFGEGRTGARVFFVAEQPGDKEDIGG 61

Query: 126 KPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPII 178
           +P  G  G + D  L  + I R + +I+                ++  S   +E CR  +
Sbjct: 62  RPLIGPAGRLFDACLNEVGIKRERCYITNAVKHFRHTQRGKRRIHQRPSTSHIEACRWWL 121

Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238
            ++IEL+ P I++ +G       F     K     G    +         L T+HP  L+
Sbjct: 122 QQEIELVEPHIIVALGAVAARSLFG-KPMKIAAIRG----IPLEFENHLILVTIHPSYLL 176

Query: 239 Q 239
           +
Sbjct: 177 R 177


>gi|167744230|ref|ZP_02417004.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 14]
          Length = 201

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 71/181 (39%), Gaps = 13/181 (7%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            +    L +   C L   +   +         +M++G  P + ++  G PF G  G +L+
Sbjct: 3   DDAPQTLDACRRCGLWEHATQAVPGAGPPRAAIMLVGEQPGNQEDREGAPFVGPAGRVLE 62

Query: 138 KMLQSIEIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
           + L +  + R  ++++                ++     E++ CR  + R+++ + P+++
Sbjct: 63  RALAAAGLDRASVYVTNAVKHFKWAPRGKRRMHKTPVQQEIDACRYWLERELDALEPRVV 122

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKKNTW 248
           + +G        ++   +    +G    +         +AT HP  +++   P  +K  +
Sbjct: 123 VALGAIALKAVLDDRHARLQPAMG----VVQSAGGRYVIATYHPSFVLRVPDPDARKRAY 178

Query: 249 H 249
            
Sbjct: 179 A 179


>gi|257052840|ref|YP_003130673.1| phage SPO1 DNA polymerase-related protein [Halorhabdus utahensis
           DSM 12940]
 gi|256691603|gb|ACV11940.1| phage SPO1 DNA polymerase-related protein [Halorhabdus utahensis
           DSM 12940]
          Length = 194

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 71/174 (40%), Gaps = 2/174 (1%)

Query: 84  LRSFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142
           +     C  L ++    +        +L+ +G  P + ++  G+PF G++G +LD  L+ 
Sbjct: 9   VEGCEQCGDLVASRSRIVDGVGPADAELLFVGEAPGEREDEQGEPFVGRSGTVLDDALRD 68

Query: 143 IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202
             + R  + I+      PP NR+ ++ E   CRP + R+I+ + P +++ +G        
Sbjct: 69  AGLSRADVRITNCVRCRPPENRDPTSDERSNCRPYLDREIDQVDPTVIVTLGKVPGEHLL 128

Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
             D   T +  G   ++    +    L  VHP   +     ++     +     
Sbjct: 129 GRDLAVTSEA-GSIEDVDIEGTTRRVLICVHPAATLYDRSQRETFERTIQQAAD 181


>gi|238063450|ref|ZP_04608159.1| phage SPO1 DNA polymerase [Micromonospora sp. ATCC 39149]
 gi|237885261|gb|EEP74089.1| phage SPO1 DNA polymerase [Micromonospora sp. ATCC 39149]
          Length = 234

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 74/215 (34%), Gaps = 28/215 (13%)

Query: 56  IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115
           +             I  +A ++ EL++       C L   +  T+         ++++G 
Sbjct: 1   MTDKTDTAPGAQQFIPPRADTIDELRAAAGGCRGCELYRDATQTVFGRGDSDARVVLVGE 60

Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW-------HPPGNRNLSN 168
            P D ++  G PF G  G +L + +    +  T+++++                ++    
Sbjct: 61  QPGDMEDQRGLPFVGPAGRLLRRAVDDAGLDPTRLYLTNAVKHFRFELRGRRRIHQTPDR 120

Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT------P 222
           + +  CRP ++ +   +SP++++ +G            +   +  G              
Sbjct: 121 VHVTACRPWLVAEFARLSPEVVVVLGATAAKALLGPSFRV-TRQRGTLMPWPASAERPED 179

Query: 223 HSIIPT--------------LATVHPQELIQYPLI 243
            + +P               LAT+HP  +++    
Sbjct: 180 FTRVPVDSAGGIADAPAARLLATIHPSAVLRADDQ 214


>gi|167924391|ref|ZP_02511482.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei BCC215]
          Length = 218

 Score =  120 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 71/175 (40%), Gaps = 13/175 (7%)

Query: 84  LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143
           L +   C L   +   +         +M++G  P + ++  G PF G  G +L++ L + 
Sbjct: 26  LDACRRCGLWEHATQAVPGAGPPRAAIMLVGEQPGNQEDREGAPFVGPAGRVLERALAAA 85

Query: 144 EIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            + R  ++++                ++  +  E++ CR  + R+++ + P++++ +G  
Sbjct: 86  GLDRASVYVTNAVKHFKWAPRGKRRMHKTPAQQEIDACRYWLERELDALGPRVVVALGAI 145

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKKNTWH 249
                 ++   +    +G    +         +AT HP  +++   P  +K  + 
Sbjct: 146 ALKAVLDDRHARLQSAMG----VVQSAGGRYVIATYHPSFVLRVPDPDARKRAYA 196


>gi|186476068|ref|YP_001857538.1| phage SPO1 DNA polymerase-like protein [Burkholderia phymatum
           STM815]
 gi|184192527|gb|ACC70492.1| phage SPO1 DNA polymerase-related protein [Burkholderia phymatum
           STM815]
          Length = 490

 Score =  120 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 78/202 (38%), Gaps = 12/202 (5%)

Query: 46  IDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQT 105
             S  Q +     +     +     A  A  + +  S L +   C L   +   +     
Sbjct: 259 AKSGAQRVAQASSVGMLGGKSVSVDAHSAQPMRQHLSTLDACRHCELWQHATQAVDGIGP 318

Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPG 162
           +   +M+IG  P D ++++GKPF G  G +LD  LQ   + R  ++++       W   G
Sbjct: 319 DDARIMLIGEQPGDHEDLAGKPFVGPAGRLLDVALQRAGLSRDGLYLTNAVKHFKWTLRG 378

Query: 163 NRNLS----NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218
            R L       E++ C   + R+++ + P +++ +G    +   +     +      W+ 
Sbjct: 379 KRRLHKTAAQQEIDACGYWLERELQRVRPAVVVTLGATALSALLHEKVNLSD-----WTG 433

Query: 219 LCTPHSIIPTLATVHPQELIQY 240
                  +  +AT HP   ++ 
Sbjct: 434 RTLNVDDMRVVATYHPSYALRQ 455


>gi|320107090|ref|YP_004182680.1| phage SPO1 DNA polymerase-like protein [Terriglobus saanensis
           SP1PR4]
 gi|319925611|gb|ADV82686.1| phage SPO1 DNA polymerase-related protein [Terriglobus saanensis
           SP1PR4]
          Length = 215

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 79/206 (38%), Gaps = 16/206 (7%)

Query: 64  VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123
           +  A        +L  ++  L     C L   +   +         +M++G  P D +++
Sbjct: 8   ISTAAPFVPAKHNLTAIREALPHCRGCELYRCATQVVPGAGRATVSIMLVGEQPGDQEDL 67

Query: 124 SGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRP 176
            GKPF    G +L + L  I +   QI+++                ++N    E+  CRP
Sbjct: 68  QGKPFVDPAGEVLHRALAEISLDPAQIYVTNAVKHFKFVRNGKRRLHKNPRMSEITACRP 127

Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236
            ++ + + I PKI+L +G                ++ GK  +          +ATVHP  
Sbjct: 128 WLLAEFDAIKPKIVLCLGASAAKSILGGTFGLM-RDRGKILSTPFAEH---VMATVHPSA 183

Query: 237 LIQYPLIKKNTWHALIT--LKKALKN 260
           +++    + +    L+   L+  L+ 
Sbjct: 184 VLR---ARDHATRDLLFRHLRDDLEA 206


>gi|4511984|gb|AAD21544.1| DNA polymerse [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 264

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 49/262 (18%), Positives = 94/262 (35%), Gaps = 17/262 (6%)

Query: 11  QILTIALFYADSGVYWV-FDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQ-QAD 68
              ++  ++  +GV  +  D P N  +           S  + I       + L+  + +
Sbjct: 2   AFKSLLEWWQQAGVDILTQDIPQNWFSKNHPENSLFKPSDNKNIRENNFSKNNLLNFKKN 61

Query: 69  SIAQKACSLHELKSLLRSFHDCHLCST---SLSTICATQTEGQDLMIIGYTPSDSDNISG 125
                A SL  +K++ ++     L          + +       LM++  +P   D   G
Sbjct: 62  EEILSAPSL--IKNIPQNISSFQLWLQNIFGEKCLFSEVKISPKLMVLSESPEAEDMAQG 119

Query: 126 KPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEME-------ICRPII 178
           + FSGK G +L  ML ++ I +  I+ + +SP     +    +               I 
Sbjct: 120 QLFSGKAGRLLHAMLDTLCIKKQDIYFATMSPIVEHIDYVKISSYAAGNSLTSHDYTLIA 179

Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238
            + I LI P+ L  +G+         +         K   +   +  I   A +HP+ L+
Sbjct: 180 AQHISLIKPRYLHLLGDAPNRALLQMNT---MDARKKIHAITVNNDNIDAFALLHPKMLL 236

Query: 239 QYPLIKKNTWHALITLKKALKN 260
           + P +K   W  L  LK  +  
Sbjct: 237 ETPPLKAIAWKDLRVLKGKIDE 258


>gi|73669315|ref|YP_305330.1| DNA polymerase [Methanosarcina barkeri str. Fusaro]
 gi|72396477|gb|AAZ70750.1| DNA polymerase [Methanosarcina barkeri str. Fusaro]
          Length = 181

 Score =  119 bits (299), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 41/168 (24%), Positives = 71/168 (42%), Gaps = 8/168 (4%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
             +   +     C L  +++  +    +    +  IG  P   +N +G PF G+ G  LD
Sbjct: 8   ETVTKEILKCTRCPLHKSAIKRVIGKGSCNPKVFFIGEAPGKRENETGIPFYGRAGKKLD 67

Query: 138 KMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197
           KM++ + +      ++     HPP NR  S  E+E C+P ++ QI L++PKI++ +GN  
Sbjct: 68  KMIEYMGLSEEDWMVTNTVKCHPPENRRPSINEIECCKPFLLSQIILLNPKIIILLGNTA 127

Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK 245
           +  F      +          +   H     L   HP  LI     K+
Sbjct: 128 EKSFCPGKKLEW--------GVPVEHEGRTILKLYHPAALIYTSSKKE 167


>gi|218530534|ref|YP_002421350.1| uracil-DNA glycosylase superfamily [Methylobacterium
           chloromethanicum CM4]
 gi|218522837|gb|ACK83422.1| Uracil-DNA glycosylase superfamily [Methylobacterium
           chloromethanicum CM4]
          Length = 485

 Score =  119 bits (299), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 71/210 (33%), Gaps = 14/210 (6%)

Query: 41  RKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI 100
                  + I+    +     P+   A     +  SL  L +++       L   +   +
Sbjct: 261 AASARAQAMIEKEPTMPVKRDPVRAVAKMAQDEPDSLEALNAIIARSE--PLVPGATQAV 318

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160
                 G  +  +G  P D ++  G+PF G  G +L + L+   I R + +++       
Sbjct: 319 LGEGPVGARIAFVGEQPGDQEDRQGRPFVGPAGQLLSRALEEAGIDRGEAYLTNAVKHFK 378

Query: 161 PG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL 213
                    +   +  E+   R  + ++++ ++PK+++ +G                +  
Sbjct: 379 FTLRGKRRIHEKPTAGEVSHYRWWLEKELDFVAPKLVVALGATAVLSLTG-KQIPITRAR 437

Query: 214 GKWSNLCTPHSIIPTLATVHPQELIQYPLI 243
           G                TVHP  L++ P  
Sbjct: 438 GP----AEFGRPFAGFITVHPSYLLRLPDE 463


>gi|76817668|ref|YP_336521.1| putative DNA glycosylase [Burkholderia pseudomallei 1710b]
 gi|254264522|ref|ZP_04955387.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 1710a]
 gi|76582141|gb|ABA51615.1| putative DNA glycosylase [Burkholderia pseudomallei 1710b]
 gi|254215524|gb|EET04909.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 1710a]
          Length = 218

 Score =  119 bits (298), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 72/175 (41%), Gaps = 13/175 (7%)

Query: 84  LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143
           L +   C L   +   +         +M++G  P + ++  G PF G  G +L++ L + 
Sbjct: 26  LDACRRCGLWEHATQAVPGAGPPRAAIMLVGEQPGNQEDREGAPFVGPAGRVLERALAAA 85

Query: 144 EIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            + R  ++++                ++  +  E++ CR  + R+++ + P++++ +G  
Sbjct: 86  GLDRASVYVTNAVKHFKWAPRGKRRMHKTPAQQEIDACRYWLERELDALGPRVVVALGAI 145

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKKNTWH 249
                 ++   +    +G    +  P      +AT HP  +++   P  +K  + 
Sbjct: 146 ALKAVLDDRHARLQPAMG----VVQPAGGRYVIATYHPSFVLRVPDPDARKRAYA 196


>gi|126456772|ref|YP_001077044.1| uracil-DNA glycosylase [Burkholderia pseudomallei 1106a]
 gi|167916534|ref|ZP_02503625.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 112]
 gi|242312175|ref|ZP_04811192.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 1106b]
 gi|254187088|ref|ZP_04893603.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei Pasteur
           52237]
 gi|126230540|gb|ABN93953.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 1106a]
 gi|157934771|gb|EDO90441.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei Pasteur
           52237]
 gi|242135414|gb|EES21817.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 1106b]
          Length = 218

 Score =  119 bits (298), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 71/175 (40%), Gaps = 13/175 (7%)

Query: 84  LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143
           L +   C L   +   +         +M++G  P + ++  G PF G  G +L++ L + 
Sbjct: 26  LDACRRCGLWEHATQAVPGAGPPRAAIMLVGEQPGNQEDREGAPFVGPAGRVLERALAAA 85

Query: 144 EIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            + R  ++++                ++  +  E++ CR  + R+++ + P++++ +G  
Sbjct: 86  GLDRASVYVTNAVKHFKWAPRGKRRMHKTPAQQEIDACRYWLERELDALEPRVVVALGAI 145

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKKNTWH 249
                 ++   +    +G    +         +AT HP  +++   P  +K  + 
Sbjct: 146 ALKAVLDDRHARLQPAMG----VVQSAGGRYVIATYHPSFVLRVPDPDARKRAYA 196


>gi|163851729|ref|YP_001639772.1| uracil-DNA glycosylase superfamily protein [Methylobacterium
           extorquens PA1]
 gi|163663334|gb|ABY30701.1| Uracil-DNA glycosylase superfamily [Methylobacterium extorquens
           PA1]
          Length = 485

 Score =  119 bits (298), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 71/210 (33%), Gaps = 14/210 (6%)

Query: 41  RKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI 100
                  + I+    +     P+   A     +  SL  L +++       L   +   +
Sbjct: 261 AASARAQAMIEKEPTMPVKRDPVRAVAKMAQDEPDSLEALNAIIARSE--PLVPGATQAV 318

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160
                 G  +  +G  P D ++  GKPF G  G +L + L+   I R + +++       
Sbjct: 319 LGEGPVGARIAFVGEQPGDQEDRQGKPFVGPAGQLLSRALEEAGIDRGEAYLTNAVKHFK 378

Query: 161 PG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL 213
                    +   +  E+   R  + ++++ ++PK+++ +G                +  
Sbjct: 379 FTLRGKRRIHEKPTAGEVSHYRWWLEKELDFVAPKLVVALGATAVLSLTG-KQIPITRAR 437

Query: 214 GKWSNLCTPHSIIPTLATVHPQELIQYPLI 243
           G                TVHP  L++ P  
Sbjct: 438 GP----AEFGRPFAGFITVHPSYLLRLPDE 463


>gi|254561501|ref|YP_003068596.1| uracil-DNA glycosylase superfamily protein [Methylobacterium
           extorquens DM4]
 gi|254268779|emb|CAX24740.1| Uracil-DNA glycosylase superfamily protein (DNA replication,
           recombination and repair) [Methylobacterium extorquens
           DM4]
          Length = 485

 Score =  119 bits (298), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 71/210 (33%), Gaps = 14/210 (6%)

Query: 41  RKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI 100
                  + I+    +     P+   A     +  SL  L +++       L   +   +
Sbjct: 261 AASARAQAMIEKEPTMPVKRDPVRAVAKMAQDEPDSLEALNAIIARSE--PLVPGATQAV 318

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160
                 G  +  +G  P D ++  G+PF G  G +L + L+   I R + +++       
Sbjct: 319 LGEGPVGARIAFVGEQPGDQEDRQGRPFVGSAGQLLSRALEEAGIDRGEAYLTNAVKHFK 378

Query: 161 PG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL 213
                    +   +  E+   R  + ++++ ++PK+++ +G                +  
Sbjct: 379 FTLRGKRRIHEKPTAGEVSHYRWWLEKELDFVAPKLVVALGATAVLSLTG-KQIPITRAR 437

Query: 214 GKWSNLCTPHSIIPTLATVHPQELIQYPLI 243
           G                TVHP  L++ P  
Sbjct: 438 GP----AEFGRPFAGFITVHPSYLLRLPDE 463


>gi|326204227|ref|ZP_08194087.1| Uracil-DNA glycosylase superfamily [Clostridium papyrosolvens DSM
           2782]
 gi|325985738|gb|EGD46574.1| Uracil-DNA glycosylase superfamily [Clostridium papyrosolvens DSM
           2782]
          Length = 219

 Score =  119 bits (297), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 72/197 (36%), Gaps = 17/197 (8%)

Query: 75  CSLHELK-SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
            SL +L    ++ F            +         ++IIG  P   +   GKPF G  G
Sbjct: 8   NSLEQLCCQYVQEFKH-------KEIVLGHGCIDSPVVIIGEAPGKDEVKQGKPFVGAAG 60

Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI---------EMEICRPIIMRQIEL 184
             L++ ++ +EI R  ++I+    +        ++          +++  +  + ++I L
Sbjct: 61  KNLNEFIEVLEISRDDLYITNAIKYRLGRLNPKTDRIVNRPATMKDIKENQIWLHKEIHL 120

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK 244
           I P I++ +GN       +N         GK         +       HP  +I    +K
Sbjct: 121 IKPHIIVTLGNVPLKAITSNFGISIGDMHGKLHECNLSGKVYKLFPLYHPASIIYNRALK 180

Query: 245 KNTWHALITLKKALKNL 261
                 +I LK+ +  L
Sbjct: 181 AVYKQDMIMLKQEVNKL 197


>gi|313682493|ref|YP_004060231.1| uracil-DNA glycosylase superfamily [Sulfuricurvum kujiense DSM
           16994]
 gi|313155353|gb|ADR34031.1| Uracil-DNA glycosylase superfamily [Sulfuricurvum kujiense DSM
           16994]
          Length = 223

 Score =  119 bits (297), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 77/186 (41%), Gaps = 6/186 (3%)

Query: 74  ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
             SL E+   +     C L  +   ++         LM +    S +++ S + + G++G
Sbjct: 42  PDSLGEINQNIAQCFLCDLSKSRRQSMSGYGNIKAQLMFVDAYVSAAEDESSEYYVGRSG 101

Query: 134 NMLDKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192
            ML  M++ +  +   ++  +      P G +N S  E   C P + +QIELI P+I++ 
Sbjct: 102 VMLRDMIEKVLNLKIEEVFFTHAVKCKPFGFQNPSPSECSSCAPFLSKQIELIKPRIIIP 161

Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
           +G        + D     +  G+      P+     +   HP  L++ P  KK     L 
Sbjct: 162 LGADAYR-ILSGDHGDFERVRGEI----IPYGDSQLIPMHHPLYLVRNPSCKKEAMRDLQ 216

Query: 253 TLKKAL 258
           T+K  L
Sbjct: 217 TIKSQL 222


>gi|167908191|ref|ZP_02495396.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei NCTC
           13177]
 gi|254192575|ref|ZP_04899014.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei S13]
 gi|169649333|gb|EDS82026.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei S13]
          Length = 223

 Score =  119 bits (297), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 71/175 (40%), Gaps = 13/175 (7%)

Query: 84  LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143
           L +   C L   +   +         +M++G  P + ++  G PF G  G +L++ L + 
Sbjct: 31  LDACRRCGLWEHATQAVPGAGPPRAAIMLVGEQPGNQEDREGAPFVGPAGRVLERALAAA 90

Query: 144 EIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            + R  ++++                ++  +  E++ CR  + R+++ + P++++ +G  
Sbjct: 91  GLDRASVYVTNAVKHFKWAPRGKRRMHKTPAQQEIDACRYWLERELDALEPRVVVALGAI 150

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKKNTWH 249
                 ++   +    +G    +         +AT HP  +++   P  +K  + 
Sbjct: 151 ALKAVLDDRHARLQPAMG----VVQSAGGRYVIATYHPSFVLRVPDPDARKRAYA 201


>gi|240138893|ref|YP_002963368.1| Uracil-DNA glycosylase superfamily protein (DNA replication,
           recombination and repair) [Methylobacterium extorquens
           AM1]
 gi|240008865|gb|ACS40091.1| Uracil-DNA glycosylase superfamily protein (DNA replication,
           recombination and repair) [Methylobacterium extorquens
           AM1]
          Length = 485

 Score =  119 bits (297), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 71/210 (33%), Gaps = 14/210 (6%)

Query: 41  RKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI 100
                  + I+    +     P+   A     +  SL  L +++       L   +   +
Sbjct: 261 AASARAQAMIEKEPTMPVKRDPVRAVAKMAQDEPDSLEALNAIIARSE--PLVPGATQAV 318

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160
                 G  +  +G  P D ++  GKPF G  G +L + L+   I R + +++       
Sbjct: 319 LGEGPVGARIAFVGEQPGDQEDRQGKPFVGPAGQLLSRALEEAGIDRGEAYLTNAVKHFK 378

Query: 161 PG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL 213
                    +   +  E+   R  + ++++ ++PK+++ +G                +  
Sbjct: 379 FTLRGKRRIHEKPTAGEVSHYRWWLEKELDFVAPKLVVALGATAVLSLTG-KQIPITRAR 437

Query: 214 GKWSNLCTPHSIIPTLATVHPQELIQYPLI 243
           G                TVHP  L++ P  
Sbjct: 438 GP----AEFGRPFAGFITVHPSYLLRLPDE 463


>gi|296283964|ref|ZP_06861962.1| Uracil-DNA glycosylase:Phage SPO1 DNA polymerase-related protein
           [Citromicrobium bathyomarinum JL354]
          Length = 477

 Score =  118 bits (296), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 72/223 (32%), Gaps = 14/223 (6%)

Query: 24  VYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSL 83
           V  +  E   +            +           + +           +  SL  +   
Sbjct: 232 VGAMLSEMPRKYWKNLPEAALIPELIAGAQQRESEMVAAGE---RDDGSRPESLEAIGEA 288

Query: 84  LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143
           +     C +       +         LMI+G  P D ++  G+PF G  G +LD  L+  
Sbjct: 289 IEGCRKCPIGCLDNRAVMGEGPSDAALMIVGEQPGDHEDQEGRPFVGPAGQLLDVHLERA 348

Query: 144 EIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            I R+  +++                +++ +  E++ CR  I  + EL+ PK++L +G  
Sbjct: 349 GINRSAAYVTNAVKHFKFTMRGKRRLHQSPTAKEIDTCRWWIEGERELVKPKLVLAMGAS 408

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
                         +  G+   L           T HP  L++
Sbjct: 409 AARGMLG-KTVSISKVRGQAIPLEDGSE---LWVTSHPSYLLR 447


>gi|328886739|emb|CCA59978.1| Uracil-DNA glycosylase, putative family 6 [Streptomyces venezuelae
           ATCC 10712]
          Length = 220

 Score =  118 bits (296), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 61/170 (35%), Gaps = 12/170 (7%)

Query: 81  KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML 140
           ++       C L   +  T+         LM++G  P D ++  G PF G  G +L + L
Sbjct: 30  RAAAAGCQGCPLHRDATGTVFGRGDPHARLMLVGEQPGDQEDREGVPFVGPAGRLLSRAL 89

Query: 141 QSIEIMRTQIHISMISPWHPPGNRNLSN---------IEMEICRPIIMRQIELISPKILL 191
           +   I    ++++                         E   CRP +M ++ L+SP++++
Sbjct: 90  REAGIDEEGLYVTNAVKHFKFTEDATRKRRIHKAPSLRETLACRPWLMAELRLVSPELVV 149

Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI--IPTLATVHPQELIQ 239
            +G            +      G    L           LATVHP  +++
Sbjct: 150 TLGATAGRALLGPSFRVGAD-RGVPRPLTDAGEGTDTRVLATVHPSAVLR 198


>gi|300710100|ref|YP_003735914.1| phage SPO1 DNA polymerase-related protein [Halalkalicoccus jeotgali
           B3]
 gi|299123783|gb|ADJ14122.1| phage SPO1 DNA polymerase-related protein [Halalkalicoccus jeotgali
           B3]
          Length = 200

 Score =  118 bits (295), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 2/163 (1%)

Query: 84  LRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142
           +     C  L  +    +  T  E  DL+I+G  P + ++  G+PF G++G  LD+ L++
Sbjct: 9   VTECECCPALVESRSRIVNGTGPEDADLLIVGEGPGEQEDEEGEPFVGRSGTQLDEKLRA 68

Query: 143 IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202
             I R  + I+      PP NR+ +  E+E CR  + R+IEL+ P +++ +G        
Sbjct: 69  HGIAREDVRITNCVRCRPPENRDPTKEELENCRGYLEREIELVDPALIMTVGKVPTEHLL 128

Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK 245
             D   T +  G              L +VHP  ++     ++
Sbjct: 129 ERDVAVTKEA-GSVVEHRIGGESRRVLISVHPAAMLYDRSQEE 170


>gi|89054559|ref|YP_510010.1| uracil-DNA glycosylase superfamily protein [Jannaschia sp. CCS1]
 gi|88864108|gb|ABD54985.1| Uracil-DNA glycosylase superfamily [Jannaschia sp. CCS1]
          Length = 465

 Score =  118 bits (295), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 78/220 (35%), Gaps = 21/220 (9%)

Query: 55  NIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIG 114
               + S   QQ    +    S     + ++    C L   +  T+         LMI+G
Sbjct: 238 PPTRMASAQEQQRAFASSWEGSDDAFLAAVKGCTRCPLHRHATQTVPGEGPAKAALMIVG 297

Query: 115 YTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLS 167
             P D +++ G+PF G  G++ D++   + + R   +I+                ++  +
Sbjct: 298 EQPGDQEDLQGRPFVGPAGHVFDQVAAEVGLDRATAYITNAVKHFKFVPRGKRRLHQRPN 357

Query: 168 NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227
             E+  C+  +  +I  ++PK++L +G+               +  G    +       P
Sbjct: 358 AGEVAYCKWWLEAEIARVTPKLILAMGSTAALALTG-SGNNLLKRCGTIEAVAGRP---P 413

Query: 228 TLATVHPQELIQ--YPLIKKNTWH----AL----ITLKKA 257
            L ++HP  +++      +          L      +++ 
Sbjct: 414 VLISLHPSYILRIKDADQRAEARQMYQRDLGRATQMVQER 453


>gi|256397876|ref|YP_003119440.1| uracil-DNA glycosylase superfamily [Catenulispora acidiphila DSM
           44928]
 gi|256364102|gb|ACU77599.1| Uracil-DNA glycosylase superfamily [Catenulispora acidiphila DSM
           44928]
          Length = 222

 Score =  118 bits (295), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 73/214 (34%), Gaps = 31/214 (14%)

Query: 76  SLHELKSLLRSFHDCHLCSTS-------LSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128
           S+  L++   S   C L             T+ +       ++ +G  P D ++  G PF
Sbjct: 10  SIDALRTAALSCQGCELHQAQPGSLSGPTQTVFSKGNPAARVVFVGEQPGDMEDRQGVPF 69

Query: 129 SGKTGNMLDKMLQSIEIMRTQIHISMISPW------HPPGNRNLSNIEM---EICRPIIM 179
            G  G + D+ +    I   Q +++            P G R     E    E C+P + 
Sbjct: 70  VGPAGQLFDRAMADAGIDPRQAYVTNSVKHFRFLQDRPNGRRIHKTPETPHIEACKPWLR 129

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH-----------SIIPT 228
            ++ ++ P++++ +G            +   +  GK                     +  
Sbjct: 130 AELAIVDPEVIVALGATAGRALIGPQFRV-TRERGKVLMWPPSGDAGFGTDPSRRRAVSF 188

Query: 229 LATVHPQELIQYPLIK---KNTWHALITLKKALK 259
           +AT HP  +++    +   K     L+ + + L 
Sbjct: 189 VATSHPSAVLRADNQETAYKEMVSDLLLVARLLA 222


>gi|295698946|ref|YP_003606839.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp.
           CCGE1002]
 gi|295438159|gb|ADG17328.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp.
           CCGE1002]
          Length = 220

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 75/203 (36%), Gaps = 16/203 (7%)

Query: 59  IHSPLVQQADSIAQKAC---SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115
              P  ++A   AQ         +  + L     C L   +   +         ++++G 
Sbjct: 2   TDRPQKKRARGDAQSEPADVEPDQHPAKLGDCRRCALWRNATQAVPGEGQRHASIVLVGE 61

Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRNLSN 168
            P D +++ GKPF G  G +LD+ L+   + R  ++++                ++  + 
Sbjct: 62  QPGDMEDLQGKPFVGPAGALLDRALEEAGVKRNDVYVTNAVKHFKWIARGKRRLHKTPAQ 121

Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT 228
            E++ C   + +++++   ++++ +G        ++   +         +          
Sbjct: 122 REVDACSYWLEQELDMPDVRVVVALGATALKAVVDDPHARLQDA----FDKTLERGEQRV 177

Query: 229 LATVHPQELIQ--YPLIKKNTWH 249
           +AT HP   ++   P  ++  + 
Sbjct: 178 VATYHPSFALRAPDPETRREVYQ 200


>gi|187735058|ref|YP_001877170.1| phage SPO1 DNA polymerase-related protein [Akkermansia muciniphila
           ATCC BAA-835]
 gi|187425110|gb|ACD04389.1| phage SPO1 DNA polymerase-related protein [Akkermansia muciniphila
           ATCC BAA-835]
          Length = 324

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 89/219 (40%), Gaps = 18/219 (8%)

Query: 50  IQPITNIRHIHSPLVQQADSIAQKACS-LHELKSLLRSFHDCHLCST---SLSTICATQT 105
           +QP         P     D   +     L  L+ L+ ++    L +      + + ++  
Sbjct: 94  VQPHRTEEDAPVPRHISFDLEGETEEEKLSSLRELVVNWP--PLRNMDSLRETPVFSSGN 151

Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP----- 160
              D+M++   P   +   G P +G +G  LD ML+++ + R+ I+++ +  + P     
Sbjct: 152 PRADIMMVTDAPGLYEEKQGVPLAGPSGQKLDAMLKAMGLSRSDIYLTHLVKYRPALPRQ 211

Query: 161 -PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
              NR  ++ E+EI  PI+  +I L+ PK+++ +G  +      +         G +   
Sbjct: 212 LTNNRPPTDREIEISLPILREEIMLVRPKVVVALGAISARGILQSGETPLSALRGTFHTA 271

Query: 220 CTPHSIIPTLATVHPQELIQYP--LIKKNTWHALITLKK 256
                  P   T +P  L++      K+  W  ++ + +
Sbjct: 272 FN----TPVRVTYNPSYLLRTEDISEKRKVWEDMLCVME 306


>gi|322368254|ref|ZP_08042823.1| phage SPO1 DNA polymerase-related protein [Haladaptatus
           paucihalophilus DX253]
 gi|320552270|gb|EFW93915.1| phage SPO1 DNA polymerase-related protein [Haladaptatus
           paucihalophilus DX253]
          Length = 195

 Score =  117 bits (293), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 72/170 (42%), Gaps = 4/170 (2%)

Query: 76  SLHELKSLLRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           ++  L   +     C  L       +     E  D++ IG  P   ++  G+PF G++G+
Sbjct: 3   TMEGLD--VTDCTRCPALVECRSQIVNGVGPEDADVLFIGEAPGAREDERGEPFVGRSGS 60

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           +LD+ L+   + R  + I+      PP NR+ +  E+  CR  + R+IEL+ P +++ +G
Sbjct: 61  VLDEKLRDRGLSRADVRITNCVRCRPPENRDPTTEELGNCREYLEREIELVDPDVIVTLG 120

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK 244
                   + D   T +  G    +    +    L  +HP   +     +
Sbjct: 121 KVPSQHVLDRDVAVTNEA-GSIEAVELGGTKRDVLVCLHPAATLYDRSQE 169


>gi|254296522|ref|ZP_04963978.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 406e]
 gi|157806362|gb|EDO83532.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 406e]
          Length = 218

 Score =  117 bits (293), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 70/175 (40%), Gaps = 13/175 (7%)

Query: 84  LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143
           L +   C L   +   +         +M++G  P + ++  G PF G  G +L++ L + 
Sbjct: 26  LDACRRCGLWEHATQAVPGAGPPRAAIMLVGEQPGNQEDREGAPFVGPAGRVLERALAAA 85

Query: 144 EIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            + R  ++++                ++  +  E++ CR  + R+++ +  ++++ +G  
Sbjct: 86  GLDRASVYVTNAVKHFKWAPRGKRRMHKTPAQQEIDACRYWLERELDALGQRVVVALGAI 145

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKKNTWH 249
                 ++   +    +G    +         +AT HP  +++   P  +K  + 
Sbjct: 146 ALKAVLDDRHARLQSAMG----VVQSAGGRYVIATYHPSFVLRVPDPDARKRAYA 196


>gi|20092394|ref|NP_618469.1| uracil-DNA glycosylase [Methanosarcina acetivorans C2A]
 gi|19917647|gb|AAM06949.1| uracil-DNA glycosylase [Methanosarcina acetivorans C2A]
          Length = 203

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 66/163 (40%), Gaps = 8/163 (4%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
             +     +   C L  ++   +    +    +M IG  P  +++ +G PF+G+ G  LD
Sbjct: 30  ETVAREAIACTRCPLHKSATKRVIGKGSCNPKVMFIGEAPGKTEDETGIPFNGRAGKKLD 89

Query: 138 KMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197
           KM++ + +      ++      PP NR     E+E C+P ++ QI L+ P+I++ +GN  
Sbjct: 90  KMVEYMGLSEEDWFVANTVKCRPPENRRPKASEIECCKPFLIAQITLLDPEIIILLGNTA 149

Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
           +                    +   +     L   HP  LI  
Sbjct: 150 EKA--------YCPERKLERGVPVEYEGRMILKLYHPAALIYT 184


>gi|48478092|ref|YP_023798.1| DNA polymerase [Picrophilus torridus DSM 9790]
 gi|48430740|gb|AAT43605.1| DNA polymerase, bacteriophage-type [Picrophilus torridus DSM 9790]
          Length = 360

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 73/169 (43%), Gaps = 9/169 (5%)

Query: 93  CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHI 152
              S + +        +++ +G  P  +++   +PF G++G +L+ ML  I I R  ++I
Sbjct: 198 WRLSRNFVPGEGNYNAEIVFVGQAPGKTEDEMKRPFVGRSGRILNSMLSMININRESVYI 257

Query: 153 SMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN 212
           + +  ++P  NR     E++ C P + RQ+++ISPKI++ +G          +      N
Sbjct: 258 TSVVQFYPEKNRVPDKSEIDACFPYLKRQLDVISPKIIVILGRIAAQSLLGIN--DIKNN 315

Query: 213 LGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
            G   N            T HP   ++   +     +  I LK  +  +
Sbjct: 316 HGTIINKRY-------FITYHPAAALRSKAVLGKMENDFIKLKNEINRI 357


>gi|312796449|ref|YP_004029371.1| uracil DNA glycosylase superfamily protein [Burkholderia
           rhizoxinica HKI 454]
 gi|312168224|emb|CBW75227.1| Uracil DNA glycosylase superfamily protein [Burkholderia
           rhizoxinica HKI 454]
          Length = 523

 Score =  117 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 75/216 (34%), Gaps = 21/216 (9%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P   A   S  +  +  S ++ +T    I     Q+A        SL E          C
Sbjct: 267 PAMIADARSGTRRMAQASTVRAMTGKPVIVDA--QRARPSRPVPSSLDE-------CRRC 317

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150
            L   +   +     E   +M+IG  P D ++++G+ F G  G +LD+ L+   + R  +
Sbjct: 318 ELWRNATQAVPGHGPETARMMLIGEQPGDYEDLAGRAFVGPAGQVLDEALRRAGVPRDTV 377

Query: 151 HISMIS---PWHPPGNRNLS----NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
            ++       W   G R L       E++ C   +  ++  + P +++ +G         
Sbjct: 378 FLTNAVKHFKWLAHGKRRLHKTPAQREIDACAHWLEHELARVRPAVIVTLGATALRAVLR 437

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
            +                       +AT HP   ++
Sbjct: 438 RNVNMQDYLH-----APVRLGDTWLVATWHPSYALR 468


>gi|21226588|ref|NP_632510.1| DNA polymerase [Methanosarcina mazei Go1]
 gi|20904864|gb|AAM30182.1| DNA polymerase [Methanosarcina mazei Go1]
          Length = 197

 Score =  117 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 8/163 (4%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
             +   + +   C L  +++  +    +    +  IG  P +S+N SG PF G+ G  LD
Sbjct: 24  ETVAREIIACIRCPLHESAIKRVIGKGSCNPKVFFIGEAPGESENKSGIPFYGRAGKKLD 83

Query: 138 KMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197
           +M++ + +      ++      PPGNR     E+E C+P ++ QI L++PK+++ +GN  
Sbjct: 84  QMVEYMGLSEEDWFVTNTVKCRPPGNRKPRVQEIECCKPFLIAQITLLNPKLIILLGNTA 143

Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
           +  F      +          +   H     L   HP  LI  
Sbjct: 144 EKSFCPERKLEW--------GVPVEHEGRTILKLYHPAALIYT 178


>gi|289581122|ref|YP_003479588.1| phage SPO1 DNA polymerase-related protein [Natrialba magadii ATCC
           43099]
 gi|289530675|gb|ADD05026.1| phage SPO1 DNA polymerase-related protein [Natrialba magadii ATCC
           43099]
          Length = 200

 Score =  117 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 77/174 (44%), Gaps = 2/174 (1%)

Query: 84  LRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142
           +     C  L  +    +  T  E  D++ +G  P   ++  G+PF G++G++LD  L+ 
Sbjct: 9   VTECERCPALVDSRSQIVNGTGPEDADILFVGEGPGAQEDSQGEPFVGRSGSVLDDQLRI 68

Query: 143 IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202
           + + R  + I+      PP NR+ +  E+E CR  + ++IEL+ P +++ +G        
Sbjct: 69  VGLDRDTVRITNCVRCRPPENRDPTTDELENCRSYLEQEIELLDPDVIVTLGKVPTEHLL 128

Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
           + D   T +  G   ++    +    L  VHP   +     ++    AL    +
Sbjct: 129 DRDVAVTKEA-GSVEDVRVNGTPRRLLICVHPAATLYDRSQEETFESALERAAE 181


>gi|108803651|ref|YP_643588.1| phage SPO1 DNA polymerase-like protein [Rubrobacter xylanophilus
           DSM 9941]
 gi|108764894|gb|ABG03776.1| phage SPO1 DNA polymerase-related protein [Rubrobacter xylanophilus
           DSM 9941]
          Length = 209

 Score =  117 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 71/187 (37%), Gaps = 7/187 (3%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
              E +        C LC +    +         L ++G  P  +++ +G+PF G +G +
Sbjct: 2   EFAEAQKEALECTRCGLCQSRTRVVFGEGPLNARLFVVGEAPGHNEDAAGRPFQGASGML 61

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRN--LSNIEMEICRPIIMRQIELISPKILLFI 193
           L+ +L S+ + R +++++ +    PPG         E+  CR  ++ Q+  + PK+++ +
Sbjct: 62  LEGLLGSVGLSREEVYLTTLVKCRPPGTPPRSPRPSEVSSCRRYLISQLVAVDPKVVVAL 121

Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253
           G                +  G+      P      + T   Q  +  P  +         
Sbjct: 122 GELPSKILTGRKESLR-RIRGR----AIPLDGRYVIPTFSLQRALYVPADRALLISDFSR 176

Query: 254 LKKALKN 260
           L + L+ 
Sbjct: 177 LPELLEA 183


>gi|217424128|ref|ZP_03455627.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 576]
 gi|217392593|gb|EEC32616.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 576]
          Length = 218

 Score =  117 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 70/175 (40%), Gaps = 13/175 (7%)

Query: 84  LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143
           L +   C L   +   +         +M++G  P + ++  G PF G  G +L++   + 
Sbjct: 26  LDACRRCGLWEHATQAVPGAGPPRAAIMLVGEQPGNQEDREGAPFVGPAGRVLERAPAAA 85

Query: 144 EIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            + R  ++++                ++  +  E++ CR  + R+++ + P++++ +G  
Sbjct: 86  GLDRASVYVTNAVKHFKWAPRGKRRMHKTPAQQEIDACRYWLERELDALGPRVVVALGAI 145

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKKNTWH 249
                 ++   +    +G    +         +AT HP  +++   P  +K  + 
Sbjct: 146 ALKAVLDDRHARLQSAMG----VVQSAGGRYVIATYHPSFVLRVPDPDARKRAYA 196


>gi|169236672|ref|YP_001689872.1| uracil-DNA glycosylase-like protein [Halobacterium salinarum R1]
 gi|167727738|emb|CAP14526.1| uracil-DNA glycosylase homolog [Halobacterium salinarum R1]
          Length = 193

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 65/164 (39%), Gaps = 2/164 (1%)

Query: 87  FHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI 145
              C  L  +    +        D++ IG  P  +++ +G PF G++G++LD  L +  +
Sbjct: 10  CTRCDALVESRSQVVNGDGPSDADVLFIGEAPGATEDDTGVPFVGRSGDVLDDELAAAGL 69

Query: 146 MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
            R  + I+      PP NR+  + E+  CR  ++ +++ + P +++ +G           
Sbjct: 70  AREDVRITNCVRCRPPDNRDPHSEELANCRSHLVAEVDSVDPAVIVTLGKVPSEHVLERS 129

Query: 206 AQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249
              T +  G    +    +    +  +HP   +     +     
Sbjct: 130 VAVTGEA-GSVERVSLGGTTRDVVVCLHPAATLYDASQRPAFRE 172


>gi|15790926|ref|NP_280750.1| DNA polymerase bacteriophage-type [Halobacterium sp. NRC-1]
 gi|10581499|gb|AAG20230.1| DNA polymerase bacteriophage-type [Halobacterium sp. NRC-1]
          Length = 203

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 65/164 (39%), Gaps = 2/164 (1%)

Query: 87  FHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI 145
              C  L  +    +        D++ IG  P  +++ +G PF G++G++LD  L +  +
Sbjct: 20  CTRCDALVESRSQVVNGDGPSDADVLFIGEAPGATEDDTGVPFVGRSGDVLDDELAAAGL 79

Query: 146 MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
            R  + I+      PP NR+  + E+  CR  ++ +++ + P +++ +G           
Sbjct: 80  AREDVRITNCVRCRPPDNRDPHSEELANCRSHLVAEVDSVDPAVIVTLGKVPSEHVLERS 139

Query: 206 AQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249
              T +  G    +    +    +  +HP   +     +     
Sbjct: 140 VAVTGEA-GSVERVSLGGTTRDVVVCLHPAATLYDASQRPAFRE 182


>gi|222478815|ref|YP_002565052.1| phage SPO1 DNA polymerase-related protein [Halorubrum lacusprofundi
           ATCC 49239]
 gi|222451717|gb|ACM55982.1| phage SPO1 DNA polymerase-related protein [Halorubrum lacusprofundi
           ATCC 49239]
          Length = 204

 Score =  116 bits (290), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 75/172 (43%), Gaps = 4/172 (2%)

Query: 79  ELKSLLRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
           +L+  + S   C  L  +    +        DL+ +G  P   ++  G+PF G++G++LD
Sbjct: 11  DLR--VPSCERCPALVESRSRIVDGVGPTDADLLFVGEGPGAQEDERGEPFVGRSGDVLD 68

Query: 138 KMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197
             L+   + R  + I+      PP NR+ +  E+  CR  +  +I+ + P++++ +G   
Sbjct: 69  DALRDAGLARADVRITNCVRCRPPDNRDPTTEELANCRGYLDAEIDRLDPELIVTLGKVP 128

Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249
                +     T ++ G+  ++    +    L +VHP   +     +   + 
Sbjct: 129 SEHLLDRSVAITSES-GEVVDVRIAGASRRVLLSVHPAATLYDRSQRDGFFE 179


>gi|119717845|ref|YP_924810.1| phage SPO1 DNA polymerase-related protein [Nocardioides sp. JS614]
 gi|119538506|gb|ABL83123.1| phage SPO1 DNA polymerase-related protein [Nocardioides sp. JS614]
          Length = 216

 Score =  116 bits (290), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 75/189 (39%), Gaps = 18/189 (9%)

Query: 86  SFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI 145
           +   C L   +   +        DLM++G  P D ++  G+PF G  G +LD+ L  + I
Sbjct: 27  ACRGCELYRDATQAVMGDGRRDADLMLLGEQPGDREDRVGEPFVGPAGKVLDEALAEVGI 86

Query: 146 MRTQIHISMISP-WHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197
               ++ + +   +   G       +++ S   +  C P +  ++ L+ P  ++ +G   
Sbjct: 87  APADVYTTNVVKHFRWSGTRGKQRIHKSPSRAHVAACGPWLEAELRLVRPTGVVLLGGTA 146

Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIP----TLATVHPQELIQYPLIKKNTWH---- 249
               +     +  ++ G+  +      +       LAT HP  +++    +++ +     
Sbjct: 147 GKAVYGA-GFRVGESRGRIHDWPASFPVARPPAWVLATTHPSAVLRA-DDRRSAYEGLVA 204

Query: 250 ALITLKKAL 258
            L  + + L
Sbjct: 205 DLRVVAQRL 213


>gi|330991819|ref|ZP_08315768.1| phage SPO1 DNA polymerase-like protein [Gluconacetobacter sp.
           SXCC-1]
 gi|329760840|gb|EGG77335.1| phage SPO1 DNA polymerase-like protein [Gluconacetobacter sp.
           SXCC-1]
          Length = 215

 Score =  115 bits (289), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 10/195 (5%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           +L EL + +R F  C L  T+  ++     +G  LM+IG  P   ++ SG PF+G++G +
Sbjct: 18  TLAELHAAMRDFSACPLRETATHSVGVEGPQGAPLMLIGEAPDADEDRSGHPFAGESGAL 77

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           +  M  SI I    +  + + PW PPG R     E  IC P I R I L  P  ++ +GN
Sbjct: 78  VGAMFASIGIAWDSLLRAPVIPWRPPGGRPPYEAETRICLPFIQRAIILARPAHVIVMGN 137

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSI---------IPTLATVHPQELIQYPLIKKN 246
                          +  G+W +L  P            +P LA  HPQ+L      +++
Sbjct: 138 LPV-SLLLEGGATAARMRGRWRSLTLPAHGLPPTASAPSVPVLAMRHPQQLRASATARRD 196

Query: 247 TWHALITLKKALKNL 261
           TW  ++++++ L N+
Sbjct: 197 TWRDMLSIRETLGNM 211


>gi|284989415|ref|YP_003407969.1| phage SPO1 DNA polymerase-like protein [Geodermatophilus obscurus
           DSM 43160]
 gi|284062660|gb|ADB73598.1| phage SPO1 DNA polymerase-related protein [Geodermatophilus
           obscurus DSM 43160]
          Length = 223

 Score =  115 bits (289), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 73/209 (34%), Gaps = 27/209 (12%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L  L++       C L   +  T+     E   ++ +G  P D ++  G+PF G  G +L
Sbjct: 16  LDGLRAAAAGCRACELWEGTTQTVFGEGPETARIVFVGEQPGDQEDRRGEPFVGPAGRLL 75

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKI 189
           DK L    I R   +I+                ++      +  CRP +  +  ++ P++
Sbjct: 76  DKALAEAGIDRRDAYITNAVKHFRFKPTGKRRIHQTPGPEHLRACRPWLEAEFAVLQPEV 135

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH--------------SIIPTLATVHPQ 235
           ++ +G        +  + +  +  G+      P                    LAT HP 
Sbjct: 136 VVCLGATAAKALISP-SFRITKERGQLFPWTPPGADTLFAAADDEEAPHQTWMLATTHPS 194

Query: 236 ELIQYPLIKKNT-----WHALITLKKALK 259
            +++ P   ++         L  +  AL 
Sbjct: 195 AILRTPDEARDAAYDALVADLRVVAHALA 223


>gi|317407476|gb|EFV87432.1| uracil-DNA glycosylase, family 4 [Achromobacter xylosoxidans C54]
          Length = 220

 Score =  115 bits (288), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 63/168 (37%), Gaps = 11/168 (6%)

Query: 82  SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
             L     C L   +   +         +M++G  P D ++++G PF G  G +LDK L 
Sbjct: 22  RKLADCRRCGLWRNATQAVGGEGKRRATIMLVGEQPGDKEDLAGHPFVGPAGALLDKALA 81

Query: 142 SIEIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
              + R  ++I+                +++ +  E+  C   + ++++ I P++++ +G
Sbjct: 82  RAGVSRDAVYITNAVKHFKWQLRGKRRMHKSPAQAEIAACGYWLEQELDDIRPRVIIALG 141

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL 242
                    +        LG+           P L   HP   ++ P 
Sbjct: 142 ATALGALVPDRKLTLKAALGQ----SLRRGNTPVLVAYHPSFALRSPD 185


>gi|332672024|ref|YP_004455032.1| phage SPO1 DNA polymerase-like protein [Cellulomonas fimi ATCC 484]
 gi|332341062|gb|AEE47645.1| phage SPO1 DNA polymerase-related protein [Cellulomonas fimi ATCC
           484]
          Length = 210

 Score =  115 bits (288), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 66/160 (41%), Gaps = 11/160 (6%)

Query: 87  FHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM 146
              C L + +   + ++ +    ++++G  P D ++  G+PF G  G +LD+ L+   + 
Sbjct: 29  CRGCELWAPATQVVFSSGSPRAAIVLVGEQPGDREDREGEPFVGPAGRLLDEALEEAGVA 88

Query: 147 RTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199
           R  ++++                ++  +   +  C P +  ++  + P++++ +G     
Sbjct: 89  RDDVYVTNAVKHFRFVERGPRRLHKTPAVAHIRACLPWLEAELAAVRPRVVVALGATAAR 148

Query: 200 FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
               +D        G+  +     + +  + T HP  +++
Sbjct: 149 AVLGHDVTV-GDVRGQVLD---GPAGVRVVVTAHPAAILR 184


>gi|163857286|ref|YP_001631584.1| putative DNA polymerase bacteriophage-type [Bordetella petrii DSM
           12804]
 gi|163261014|emb|CAP43316.1| putative DNA polymerase bacteriophage-type [Bordetella petrii]
          Length = 204

 Score =  115 bits (288), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 80/207 (38%), Gaps = 15/207 (7%)

Query: 66  QADSIAQKACSLH--ELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123
           QA    + +  +   +    L+    C L   +   +         +M++G  P D +++
Sbjct: 2   QAPDGREASDDIDPDQQPRRLQDCRRCGLWRDATQPVAGAGKRSARIMLVGEQPGDKEDL 61

Query: 124 SGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRP 176
           +G+PF G  G +LD+ LQ+  + R  ++++                ++  +  E+E C  
Sbjct: 62  AGQPFVGPAGALLDRALQAAGVPREAVYVTNAVKHFKWQARGKRRMHKTPAQREIEACHY 121

Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236
            +  ++  + P++++ +G                  LG+       H  +  +A  HP  
Sbjct: 122 WLEDELRAVRPRVVVALGATALRSVMQAKPPALKAVLGR----ALEHDGMAVIAAYHPSF 177

Query: 237 LIQYPL--IKKNTWHALITLKKALKNL 261
            ++ P    ++  + A++   +    L
Sbjct: 178 ALRAPDTQARRRAFEAIVQALERAARL 204


>gi|300021879|ref|YP_003754490.1| uracil-DNA glycosylase superfamily [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299523700|gb|ADJ22169.1| Uracil-DNA glycosylase superfamily [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 469

 Score =  115 bits (287), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 83/234 (35%), Gaps = 23/234 (9%)

Query: 41  RKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI 100
              + +D  ++   +I    SP      S      SL  L  ++ +             +
Sbjct: 243 AAARRVDDMLEAPPSISIKRSPERALLRSTGSPPLSLEALNEIITASDAF--VPGGTRAV 300

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160
                   DL  IG  P D ++I G+PF G  G + D+ L +  I R + +I+       
Sbjct: 301 LGEGPLRPDLAFIGEQPGDQEDIQGRPFVGPAGAIFDRALAASGISRAECYITNAVKHFK 360

Query: 161 PG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL 213
                    ++  ++ E++  R  +  +++++ PK+++ +G             K  ++ 
Sbjct: 361 YEQRGKRRIHQTPTHGEIKHYRWWLQEELKIVQPKLVVALGASAAFALAG-RPVKVSESR 419

Query: 214 GKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW-------HALITLKKALKN 260
           G      T    +P + T+HP  +++    K             L   +  L  
Sbjct: 420 G-----LTKFDTVPAVLTIHPSYILRL-QDKAQAETEFAKFVADLNLARACLAE 467


>gi|255514104|gb|EET90367.1| phage SPO1 DNA polymerase-related protein [Candidatus Micrarchaeum
           acidiphilum ARMAN-2]
          Length = 321

 Score =  115 bits (287), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 60  HSPLVQQADSIAQKACSLHELK-SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPS 118
              ++  A+  A+    +  L     R F      S S   +         +M +G  P 
Sbjct: 124 RGDIIASANRYAESKRQMDILNLEYSRLFDRFENWSLSSRFVPGEGPLDARIMFLGQAPG 183

Query: 119 DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPII 178
             ++ + +PF G++G +L  M++   + R + +I+ +  + PP NR  S+ E+++C+P +
Sbjct: 184 SEEDKTLRPFVGRSGMLLTDMIKRAGLDRDKAYITSVVQFFPPRNRAPSSFEIDVCKPFL 243

Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238
            +QI+++ P +++ +GN                              +    T+HP   +
Sbjct: 244 FKQIDIVKPGLVVLLGNVAMLAVLGRTGVS------SMHGTVVEKDGVRYFITLHPSAAL 297

Query: 239 QYPLIKKNTWHALITLKKALKNL 261
           +              L   +++L
Sbjct: 298 RIKSKIPIIEADFKKLGSIVRDL 320


>gi|330817358|ref|YP_004361063.1| phage SPO1 DNA polymerase-related protein [Burkholderia gladioli
           BSR3]
 gi|327369751|gb|AEA61107.1| phage SPO1 DNA polymerase-related protein [Burkholderia gladioli
           BSR3]
          Length = 493

 Score =  115 bits (287), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 81/215 (37%), Gaps = 14/215 (6%)

Query: 46  IDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQT 105
             S  + +     I +   +     A+ A  + E  S L +   C L   +   + +   
Sbjct: 258 ARSGARRLAQASGIGTLNGKAIAVEAEVAQPVREQASSLDACRRCDLWRNATQAVGSAGP 317

Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPG 162
               +M+IG  P D +++SG+PF G  G +LD  ++   ++R Q++++       W P G
Sbjct: 318 SSARIMLIGEQPGDQEDLSGQPFVGPAGQLLDLAIERAGLLRDQVYLTNAVKHFKWEPRG 377

Query: 163 ----NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218
               ++     E+E C   +  +++ + P +++ +G           A+        + N
Sbjct: 378 KRRLHKTPMQREIEACHHWLEHELDTVRPAVIVALGATALTALLRRKAKLLD-----YLN 432

Query: 219 LCTPHSIIPTLATVHPQELIQYPLI--KKNTWHAL 251
                     + T HP   ++      +      +
Sbjct: 433 APFEIDGGWAIVTYHPSFALRQQDDNSRDKVLDDM 467


>gi|292654621|ref|YP_003534518.1| uracil DNA glycosylase [Haloferax volcanii DS2]
 gi|291372686|gb|ADE04913.1| uracil DNA glycosylase [Haloferax volcanii DS2]
          Length = 198

 Score =  115 bits (287), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 71/167 (42%), Gaps = 2/167 (1%)

Query: 84  LRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142
           +     C  L  +    +     +  DL+ +G  P   ++  G+PF G++G++LD  L+ 
Sbjct: 9   VTGCERCPELVDSRSRIVNGVGPDDADLLFLGEAPGAKEDEGGEPFVGRSGSVLDDALRE 68

Query: 143 IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202
             + R  + I+      PP NR+ ++ E+  CR  + R++EL+ P++++ +G        
Sbjct: 69  AGLARADVRITNCVRCRPPDNRDPTSDELSNCRGYLARELELVDPELVVTLGKVPSQHLL 128

Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249
           +          G   +     +    L +VHP   +     ++  + 
Sbjct: 129 D-RGVAITNESGSVVDARVGDASYRVLLSVHPAATLYDRSQREGFFE 174


>gi|313127470|ref|YP_004037740.1| uracil-DNA glycosylase, family 4 [Halogeometricum borinquense DSM
           11551]
 gi|312293835|gb|ADQ68295.1| uracil-DNA glycosylase, family 4 [Halogeometricum borinquense DSM
           11551]
          Length = 200

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 76/168 (45%), Gaps = 3/168 (1%)

Query: 84  LRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142
           +R    C  L  +    +     +  DL+ +G  P  +++  G+PF G++G++LD  L+ 
Sbjct: 11  VRECERCPELVESRSQIVNGVGPDDADLVFLGEAPGANEDEQGEPFVGRSGSVLDDALRD 70

Query: 143 IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202
           + + R+ + I+      PP NR+ +  E+  CR  + R++EL+ P +++ +G        
Sbjct: 71  VGLARSDVRITNCVRCRPPENRDPTKTELGNCRGYLERELELLDPDLVVTLGKVPSEHLL 130

Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
           +     T +  G   ++     +   L  VHP   +      ++T+  
Sbjct: 131 DRSVAVTKEA-GDVVDVRLGERLQRVLICVHPAATLYDRSQ-RDTFSD 176


>gi|91774250|ref|YP_566942.1| phage SPO1 DNA polymerase-related protein [Methanococcoides
           burtonii DSM 6242]
 gi|91713265|gb|ABE53192.1| Uracil DNA glycosylase [Methanococcoides burtonii DSM 6242]
          Length = 184

 Score =  114 bits (285), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 81/184 (44%), Gaps = 18/184 (9%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           +L  ++  +     C L  T ++ +    ++   ++ IG  P   ++ +G PF G+ G +
Sbjct: 7   TLEGVEKDILDCTACPLSETVINKVVRKGSDEPKVLFIGEAPGKKEDETGVPFCGRAGKI 66

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           LD++++ + +  +   +       PP NRN +  E++ C+P ++RQI+L+ P +++ +GN
Sbjct: 67  LDELIEYMGLESSDWAVINTIKCRPPNNRNPNKKELDCCKPFLIRQIQLLDPNLIVLLGN 126

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI----------QYPLIKK 245
             +  + +    K     G    L   +     L   HP  LI          ++    +
Sbjct: 127 TAEKAYCSGHKMKW----GAVEMLEGKN----VLKIFHPAALIYTRSRTEDQHRFLDENR 178

Query: 246 NTWH 249
             W 
Sbjct: 179 YIWE 182


>gi|220929816|ref|YP_002506725.1| uracil-DNA glycosylase [Clostridium cellulolyticum H10]
 gi|220000144|gb|ACL76745.1| Uracil-DNA glycosylase superfamily [Clostridium cellulolyticum H10]
          Length = 218

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 64/174 (36%), Gaps = 9/174 (5%)

Query: 97  LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156
              +         + IIG  P   +   GKPF G  G  L++ ++ +EI R  ++I+   
Sbjct: 24  KEIVLGHGCIDSPVAIIGEAPGKDEVKLGKPFVGAAGKNLNEFIEVLEISRDDLYITNAI 83

Query: 157 PWHPPGNRNLSNI---------EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207
            +        +           +++  +  + R+I ++ P+I++ +GN       +N   
Sbjct: 84  KYRLGRLNPKTRRIVNRPATIKDIKENQIWLHREIHILKPQIIVTLGNVPLKAVTDNFRL 143

Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
                 G          +       HP  +I    +K      ++ LKK +K L
Sbjct: 144 SIGDMHGVLHECNLAGKVYKIFPLYHPASIIYNRTLKDVYHEDMMVLKKEIKKL 197


>gi|282862962|ref|ZP_06272022.1| Uracil-DNA glycosylase superfamily [Streptomyces sp. ACTE]
 gi|282561944|gb|EFB67486.1| Uracil-DNA glycosylase superfamily [Streptomyces sp. ACTE]
          Length = 225

 Score =  113 bits (282), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 76/207 (36%), Gaps = 27/207 (13%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           +  L+      H C L + +  T+  T       +++G  P D ++ SG+PF G  G +L
Sbjct: 20  IAALRRAAAGCHGCPLYADATQTVFGTGPVPARALLVGEQPGDQEDRSGEPFVGPAGGLL 79

Query: 137 DKMLQSIEIMRTQIHISMISPW----------HPPGNRNLSNIEMEICRPIIMRQIELIS 186
            + L +  +    ++++                   ++     E+  CRP +  ++  + 
Sbjct: 80  RRALAAAGVDDRDVYLTNAVKHFKFAPVAEGRRRRIHKAPDLRELAACRPWLAAELRRVD 139

Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT-----------PHSIIPTLATVHPQ 235
           P++++ +G          +A K  ++ G   +L                    LATVHP 
Sbjct: 140 PELVVALGATAGKSVLG-NAFKVSESRGALLSLPPDEDLPLTAGEERPGGRRFLATVHPS 198

Query: 236 ELIQYPLIKKNTWH----ALITLKKAL 258
            +++    +   +      L    + L
Sbjct: 199 AVLRA-RDRDEAFDGLVSDLRVAARFL 224


>gi|284166413|ref|YP_003404692.1| phage SPO1 DNA polymerase-related protein [Haloterrigena turkmenica
           DSM 5511]
 gi|284016068|gb|ADB62019.1| phage SPO1 DNA polymerase-related protein [Haloterrigena turkmenica
           DSM 5511]
          Length = 201

 Score =  113 bits (282), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 72/174 (41%), Gaps = 2/174 (1%)

Query: 84  LRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142
           +     C  L  +    +     E  DL+ +G  P  +++  G+PF G++G +LD  L++
Sbjct: 12  VTECTRCPKLVDSRSRIVNGVGPEDADLLFVGEGPGANEDEQGEPFVGRSGTVLDDGLRT 71

Query: 143 IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202
           + + RT + I+      PP NR+ +  E+  CR  +  +IE + P +++ +G        
Sbjct: 72  VGLDRTDVRITNCVRCRPPENRDPTKDELANCRSYLETEIERLDPDVIVTLGKVPSEHLL 131

Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
              +    +  G    +         L  VHP   +     ++   +AL    +
Sbjct: 132 -ERSVAVTKEAGSLEEVRINGMPQRVLLCVHPAATLYDRSQEETFENALERAAE 184


>gi|220930591|ref|YP_002507500.1| uracil-DNA glycosylase [Clostridium cellulolyticum H10]
 gi|220000919|gb|ACL77520.1| Uracil-DNA glycosylase superfamily [Clostridium cellulolyticum H10]
          Length = 196

 Score =  112 bits (281), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 57/181 (31%), Gaps = 5/181 (2%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            ++     +   C L       I         + ++   P   ++  G  F   T   L 
Sbjct: 13  EKVPEKAVNCQKCELHCQRSRIIWGEGNPKAPITVLLDNPGAREDKCGVEFICGTRETLQ 72

Query: 138 KMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197
           + +    +    ++++ +    P    +        C   ++ QI+   P ++  +GN  
Sbjct: 73  RAVFEAGLKMEDLYVTYVLKCRPVRRYDKEKA-RATCMEYLIEQIDRQKPMLVFCLGNIA 131

Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKA 257
             +FF     +     G W ++        T AT HP  + + P +          L + 
Sbjct: 132 AQWFFGEKDTEVKNIRGFWHSV----RGYTTSATYHPLAVRRRPNLYPTFVKDWKMLAER 187

Query: 258 L 258
            
Sbjct: 188 Y 188


>gi|319791575|ref|YP_004153215.1| uraciL-DNA glycosylase superfamily [Variovorax paradoxus EPS]
 gi|315594038|gb|ADU35104.1| Uracil-DNA glycosylase superfamily [Variovorax paradoxus EPS]
          Length = 481

 Score =  112 bits (280), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 81/223 (36%), Gaps = 15/223 (6%)

Query: 40  QRKEKSIDSAIQPITNIRHIHSP-LVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLS 98
             + +S      P T  R I +P  +    +       L EL++   +   C + + +  
Sbjct: 247 AAEARSQSMIDAPPTAARRIRAPIALHVRPAEGVAPADLGELRAAAHACRACPIGALATQ 306

Query: 99  TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158
            +C         M++G  P D +++ G+PF G  G +LD+ +  +   R  ++++     
Sbjct: 307 AVCGEGPLAPQHMLVGEQPGDQEDLMGRPFVGPAGQLLDRAMAQLGWARDSVYLANAVKH 366

Query: 159 HPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQ 211
                      ++  +  E + C   +  +I L+ P+ L+ +G                +
Sbjct: 367 FKYELRGKRRIHKTAAQREADACAHWLDSEISLVRPEGLVALGATAARALLGRPVAVQAE 426

Query: 212 NLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT----WHA 250
             G W  L       P   T+HP  L++    ++      W  
Sbjct: 427 -RGAW--LHERSDGRPVFVTLHPSALLRLADGERVAAYARWLD 466


>gi|289642239|ref|ZP_06474389.1| phage SPO1 DNA polymerase-related protein [Frankia symbiont of
           Datisca glomerata]
 gi|289507973|gb|EFD28922.1| phage SPO1 DNA polymerase-related protein [Frankia symbiont of
           Datisca glomerata]
          Length = 230

 Score =  112 bits (280), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 72/190 (37%), Gaps = 16/190 (8%)

Query: 86  SFHDCHLCSTS-LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIE 144
           S   C L       T+         L+++G  P D ++  G+PF G  G +LD+ L    
Sbjct: 41  SCRGCELADLPDTRTVFGEGNPRARLVLVGEQPGDVEDRRGRPFVGPAGKLLDRALADAG 100

Query: 145 IMRTQIHISMISPWHPPG--------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           I R + +++                 ++     ++  CRP +  ++  I P++++ +G  
Sbjct: 101 IDRAEAYVTNAVKHFRYRRNGGPRRIHQTPDARQVTACRPWLAAELNRIRPRLVVLLGAT 160

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ-YPLIKKNTWH----AL 251
                     +   +  G+      P S    +AT+HP  +++  P  +   +      L
Sbjct: 161 AGQALLGPSFRV-TKMRGRLLPGP-PGSDAQLIATLHPSAVLRVEPTTRDEVYAGFVHDL 218

Query: 252 ITLKKALKNL 261
              ++ L  +
Sbjct: 219 ELAERTLAGM 228


>gi|303242372|ref|ZP_07328856.1| Uracil-DNA glycosylase superfamily [Acetivibrio cellulolyticus CD2]
 gi|302590050|gb|EFL59814.1| Uracil-DNA glycosylase superfamily [Acetivibrio cellulolyticus CD2]
          Length = 191

 Score =  112 bits (279), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 63/181 (34%), Gaps = 5/181 (2%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            +L    +    C L       +        D+++I   P   ++ +G      T   L 
Sbjct: 13  DQLPECAKGCTRCELYKQRTRIVWGEGNPKADIVVILDNPGCREDKNGNELICGTRQTLQ 72

Query: 138 KMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197
               S+ +    ++I+ I    P    N  N   E C   + +Q++  + KI   +G+  
Sbjct: 73  FAANSVGLNEKDLYITYILKCRPVRKYNKENA-RETCLGYLYQQLQTNNFKIAFCLGDVA 131

Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKA 257
              FF++  +      G W  +      IPT  + HP  + + P +     +    + K 
Sbjct: 132 VKAFFSDPERDVKSTRGMWHYV----RNIPTYVSYHPLAIRRRPNLYGIFINDWEQVNKF 187

Query: 258 L 258
            
Sbjct: 188 Y 188


>gi|187920666|ref|YP_001889698.1| uracil-DNA glycosylase superfamily [Burkholderia phytofirmans PsJN]
 gi|187719104|gb|ACD20327.1| Uracil-DNA glycosylase superfamily [Burkholderia phytofirmans PsJN]
          Length = 546

 Score =  112 bits (279), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 74/217 (34%), Gaps = 14/217 (6%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACS--LHELKSLLRSFH 88
           P                 A +         +  + +   +   A +  L E    L +  
Sbjct: 305 PLRYWKTPPAGPPLPARLARERSRLGAQSGTVTIPETPPLEYSAVTPPLREPTGPLPTCR 364

Query: 89  DCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRT 148
            C L   +   +         LM++G  P + +N  G PF+G  G +LD +L    + R+
Sbjct: 365 RCALWRNAKQAVAGAGPARAALMVVGEQPGEHENQHGVPFTGPAGQLLDTVLVRAGLERS 424

Query: 149 QIHISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
            ++++     +          +R  +  E+E C+  +  ++  ++P++++ +G       
Sbjct: 425 ALYLTYAVKHYKWETLEQRRVHRTPARREVEACQYWLDHELAQVAPRVVVTLGATALKAL 484

Query: 202 FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238
                  +     ++      H     + T HP   +
Sbjct: 485 TGAHVNLS-----EYLGQTIDHGGRLIVPTWHPSYAL 516


>gi|89896479|ref|YP_519966.1| hypothetical protein DSY3733 [Desulfitobacterium hafniense Y51]
 gi|89335927|dbj|BAE85522.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 191

 Score =  111 bits (278), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 67/181 (37%), Gaps = 5/181 (2%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            +L     ++ +C +C+     I         ++II   P   ++  G  +   T   L 
Sbjct: 13  DKLPKEAVAYRECEVCTEKARIIWGEGNPKAPVVIILDNPGAREDKDGHEYVCGTRQTLQ 72

Query: 138 KMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197
             L   ++    I+I+ +    P   R          +  +++QI+ I P++L+ +G+  
Sbjct: 73  TALHQADLTPDDIYITYLLKCRPL-RRYNKEEARAFSKSFLIQQIKTIQPQLLVCLGDTV 131

Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKA 257
               F++         G W  +       P + + HP  + + P + +        L++ 
Sbjct: 132 VQAMFDDQEAHVKNLRGSWHVI----LGYPCIVSYHPLAVRRRPNLARQFREDWDMLRQR 187

Query: 258 L 258
           L
Sbjct: 188 L 188


>gi|218681720|ref|ZP_03529521.1| phage SPO1 DNA polymerase-related protein [Rhizobium etli CIAT 894]
          Length = 410

 Score =  111 bits (278), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 73/167 (43%), Gaps = 7/167 (4%)

Query: 35  ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94
           A+ ES+ +  +   A  P+     +              A +L  L +       C L  
Sbjct: 232 ASAESKVRAMAAREATHPLALHDRLQQAARNHPADAEALAGTLEALSAEAAVCTRCPLHE 291

Query: 95  TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154
            +  T+        ++M +G  P D ++I+G+PF G  G +LD+++    I R++++++ 
Sbjct: 292 KATQTVFGEGPRDAEVMFVGEQPGDQEDIAGRPFVGPAGRLLDQVIAEAGIDRSRLYVTN 351

Query: 155 ISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
                          ++  +  E++ CR  +  ++EL+ PK+++ +G
Sbjct: 352 AVKHFKYEPRGKRRIHQKPNMGEVKHCRWWLDLEMELVKPKLIVAMG 398


>gi|323525788|ref|YP_004227941.1| phage SPO1 DNA polymerase-like protein [Burkholderia sp. CCGE1001]
 gi|323382790|gb|ADX54881.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp.
           CCGE1001]
          Length = 490

 Score =  111 bits (278), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 79/217 (36%), Gaps = 15/217 (6%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P          + ++    +   + +  +    +      AQ A +     S L +   C
Sbjct: 247 PEGRLIPAMLSEARTGARRVAQASGVTALGGKAIPVEAESAQPARAQP---SSLNACRRC 303

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150
            L   +   +         +M+IG  P D +++SG+PF G  G +L+  +    + R ++
Sbjct: 304 VLWRHATQAVGGAGPRPAPIMLIGEQPGDQEDLSGEPFVGPAGQLLNSAIARAGLTRDEL 363

Query: 151 HISMIS---PWHPPGNRNLS----NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
           +++       W P G R L       E+E C   +  +   + P +++ +G    +    
Sbjct: 364 YLTNAVKHFKWEPRGKRRLHKTPAQREVEACSHWLAHEFATVRPSVVVVLGATALHALL- 422

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
            ++      L +   L         +AT HP   ++ 
Sbjct: 423 RESASLSDYLSEPFELEGGWG----IATYHPSFALRQ 455


>gi|310644810|ref|YP_003949569.1| uracil-DNA glycosylase superfamily [Paenibacillus polymyxa SC2]
 gi|309249761|gb|ADO59328.1| Uracil-DNA glycosylase superfamily [Paenibacillus polymyxa SC2]
          Length = 197

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 54/179 (30%), Gaps = 6/179 (3%)

Query: 84  LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143
           +     C L       I         LM+I   P   ++  G  F   T   L   ++  
Sbjct: 17  IEHCEICELSKQRNRVIWGEGNPKAPLMMILDNPGAREDREGNSFLCGTRETLQYGMREA 76

Query: 144 EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
            I    ++++ +    P             C P +  Q+    P +L   GN      F 
Sbjct: 77  GIDVNDVYVTYLLKCRP-MRAYNKPEARAACLPHLQIQLFQKQPLVLFGFGNVVAGAIFT 135

Query: 204 ND-AQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
           N       +  G W  L       P   T HP  + +   + +     L  LK+  K +
Sbjct: 136 NKEGASVKELRGSWYELQ----GTPISFTYHPLAVRRRANLLRFFVEDLKALKEKWKEI 190


>gi|148655030|ref|YP_001275235.1| phage SPO1 DNA polymerase-like protein [Roseiflexus sp. RS-1]
 gi|148567140|gb|ABQ89285.1| phage SPO1 DNA polymerase-related protein [Roseiflexus sp. RS-1]
          Length = 186

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 65/163 (39%), Gaps = 6/163 (3%)

Query: 98  STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP 157
             +         +M IG  P  +++  G+PF G  G  L+++L    + R+ + I+ +  
Sbjct: 2   RAVPGEGPPDAKVMFIGEAPGFNEDRQGRPFVGAAGQFLEELLALAGLRRSDVFIANVIK 61

Query: 158 WHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS 217
             PPGNR+    E+  C   + RQI  ++P +++ +G  +   +F  +         +W 
Sbjct: 62  HRPPGNRDPEPDEIAACSQFLERQIAALNPLVIVTLGRFSMARWFPGEKISRIHGQPRWI 121

Query: 218 NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
           +          +  +HP   +  P  +         L + +  
Sbjct: 122 D------GRLIVPMMHPAAALHQPQYRALIEADFRRLPEFIAQ 158


>gi|187924320|ref|YP_001895962.1| phage SPO1 DNA polymerase-related protein [Burkholderia
           phytofirmans PsJN]
 gi|187715514|gb|ACD16738.1| phage SPO1 DNA polymerase-related protein [Burkholderia
           phytofirmans PsJN]
          Length = 491

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 74/211 (35%), Gaps = 19/211 (9%)

Query: 37  YESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTS 96
            E++   + +  A                 A    ++  SL        +   C L   +
Sbjct: 257 SEAKSGARRVAQASGVGALGGKTIPVEADMAQPAREQPSSLD-------TCRRCDLWRNA 309

Query: 97  LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156
              + ++      +M+IG  P D +++SG+PF G  G +L+  +    + R Q++++   
Sbjct: 310 TQAVGSSGPSDARIMLIGEQPGDQEDLSGQPFVGPAGQLLETAITRAGLSREQVYLTNAV 369

Query: 157 ---PWHPPGNRNLS----NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209
               W P G R L       E+E C   + R++  + P +++ +G               
Sbjct: 370 KHFKWEPRGKRRLHKTPGQREIEACSYWLERELHTVRPVVIVTLGATALTALLREKVSLR 429

Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
                   +          +AT HP   ++ 
Sbjct: 430 DHL-----DAPFRVEGGWGIATYHPSFALRQ 455


>gi|322435429|ref|YP_004217641.1| phage SPO1 DNA polymerase-related protein [Acidobacterium sp.
           MP5ACTX9]
 gi|321163156|gb|ADW68861.1| phage SPO1 DNA polymerase-related protein [Acidobacterium sp.
           MP5ACTX9]
          Length = 521

 Score =  110 bits (276), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 72/171 (42%), Gaps = 11/171 (6%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           ++  +   L +   C L   +   +         LM++G  P D +++ G+PF G  G +
Sbjct: 327 TIRAIAEALPTCKGCELYCHATQVVPGRGPATAALMLVGEQPGDQEDLQGEPFIGPAGAV 386

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPK 188
           LD +L+ + I R +++++                +++    E+  CRP ++ +I+ I PK
Sbjct: 387 LDHILEDLRIPRKEVYVTNAVKHFKFVQRGKLRLHQSPRMSEIMACRPWLLAEIDAIKPK 446

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
           ++L +G                   GK ++           AT+HP  +++
Sbjct: 447 VVLCLGASASKSLLGGTFALMKD-HGKLNSTPFAD---KVFATIHPSAVLR 493


>gi|329924361|ref|ZP_08279478.1| uracil-DNA glycosylase, family 4 [Paenibacillus sp. HGF5]
 gi|328940712|gb|EGG37029.1| uracil-DNA glycosylase, family 4 [Paenibacillus sp. HGF5]
          Length = 199

 Score =  110 bits (276), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 56/180 (31%), Gaps = 6/180 (3%)

Query: 82  SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
             ++    C LC      I         LM+I   P   ++  G PF   T   L   ++
Sbjct: 19  EDMQHCERCELCRQRNRVIWGEGNPQGSLMMILDNPGAREDREGNPFLCGTRETLQLGMK 78

Query: 142 SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
              I    ++++ +     P            C P +  Q+    P +L   GN      
Sbjct: 79  EAGIDIHSVYVTYLLK-RRPTRAYDKPATRAACLPHLQSQLLQKQPLVLFGFGNVVVEGL 137

Query: 202 F-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
           F   +     +  G W         IP   T HP  + + P + +     L  L+   + 
Sbjct: 138 FPQKENATVKELRGSWHEFE----GIPIGFTYHPLAVRRRPNLLRFFIEDLKGLRTKWEE 193


>gi|103486672|ref|YP_616233.1| uracil-DNA glycosylase superfamily protein [Sphingopyxis alaskensis
           RB2256]
 gi|98976749|gb|ABF52900.1| Uracil-DNA glycosylase superfamily [Sphingopyxis alaskensis RB2256]
          Length = 262

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/260 (19%), Positives = 96/260 (36%), Gaps = 32/260 (12%)

Query: 14  TIALFYADSGVY---------WVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLV 64
           +   +++ +GV          W+   P N+A     R+  +  +  QP+ +         
Sbjct: 12  SYCDWWSLAGVDALVGEQPAGWLAMSPANDAAASRPRRTATAAAEPQPLPDALQ------ 65

Query: 65  QQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYT-------- 116
                 +++        +L   + D H    S   +  +Q + + ++ +G          
Sbjct: 66  ---RQSSERPVESRGPTALPADWKDFHQWLGSSEAVPGSQWDARRVLPVGEAAAPLMLLT 122

Query: 117 --PSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC 174
             P   D   G+ F+G  G +LD MLQ+I ++R Q +++ ++   PPG   +   +    
Sbjct: 123 AWPEIDDQREGQLFAGPAGKLLDAMLQAIGLVRRQCYVASLAVTRPPGG-RIDAHDAAEL 181

Query: 175 RPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHP 234
             ++   + L  P+ LL IG                   GK  +L      + T+A  HP
Sbjct: 182 DRLLWHHLRLAMPQRLLLIGGDIVRIAAGLTL---SDARGKLLDLNQDGGKMETVAVAHP 238

Query: 235 QELIQYPLIKKNTWHALITL 254
             L+  P  K   W +L   
Sbjct: 239 AMLLARPAQKAAAWDSLKLF 258


>gi|219667667|ref|YP_002458102.1| uracil-DNA glycosylase [Desulfitobacterium hafniense DCB-2]
 gi|219537927|gb|ACL19666.1| Uracil-DNA glycosylase superfamily [Desulfitobacterium hafniense
           DCB-2]
          Length = 191

 Score =  110 bits (274), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 68/181 (37%), Gaps = 5/181 (2%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            +L     ++ +C +C+     I         ++II   P   ++  G  +   T   L 
Sbjct: 13  DKLPKEAVAYRECEVCTEKARIIWGEGNPKAPVVIILDNPGAREDKDGHEYVCGTRQTLQ 72

Query: 138 KMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197
             L   ++    I+I+ +    P   R          +P +++QI+ I P++L+ +G+  
Sbjct: 73  TALHQADLAPDDIYITYLLKCRPL-RRYNKEEARTFSKPFLIQQIKTIQPQLLVCLGDTV 131

Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKA 257
               F++         G W  +       P + + HP  + + P + +        L++ 
Sbjct: 132 VQAMFDDQEAHVKNLRGSWHVI----LGYPCIVSYHPLAVRRRPNLARQFREDWDMLRQR 187

Query: 258 L 258
           L
Sbjct: 188 L 188


>gi|303242849|ref|ZP_07329313.1| Uracil-DNA glycosylase superfamily [Acetivibrio cellulolyticus CD2]
 gi|302589595|gb|EFL59379.1| Uracil-DNA glycosylase superfamily [Acetivibrio cellulolyticus CD2]
          Length = 193

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 63/172 (36%), Gaps = 9/172 (5%)

Query: 97  LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156
              +         L++IG  P   +  + KPF G  G  L + L+ + + R +I+I+   
Sbjct: 21  QEIVTGDGNPNSSLLLIGEAPGKDEVANSKPFVGMAGKNLAQFLEVLGLKRDEIYITNAI 80

Query: 157 PWHPPG---------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207
                          NR  +  E+E  R  ++ +I++I PK ++ +GN        +   
Sbjct: 81  KHRLSKVNPSTGRLSNRPATKEEIEQNREYLIEEIDIIGPKYIITLGNVPLRSVLGDHKA 140

Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
                 G    +             HP  +I    IKK     +  L++ +K
Sbjct: 141 SIGDVHGALDKVSVKGREYGLYPLYHPASIIYNASIKKIYTKDIENLREIIK 192


>gi|84500118|ref|ZP_00998384.1| putative uracil-DNA glycosylase [Oceanicola batsensis HTCC2597]
 gi|84392052|gb|EAQ04320.1| putative uracil-DNA glycosylase [Oceanicola batsensis HTCC2597]
          Length = 478

 Score =  109 bits (273), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 78/234 (33%), Gaps = 21/234 (8%)

Query: 40  QRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHEL-KSLLRSFHDCHLCSTSLS 98
                   +A  P            + A +   +      L +       +         
Sbjct: 252 AEARVREMAARAPTLPPVRAARIAERLAGTGVDRVMDFEALHRRAAEENREVPDGYGR-- 309

Query: 99  TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158
            +         LMI+G  P D+++ +G+PF G +G +LD+   +  + R+  +++     
Sbjct: 310 IVLGEGPGDAPLMIVGEQPGDAEDRAGRPFVGPSGQLLDREAAAAGLDRSAAYVTNAVKR 369

Query: 159 HPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQ 211
                      ++     E+E  R  +  +I L+ P+++L +G         +      +
Sbjct: 370 FKFVQRGKRRLHQPPDRTEIEHGRWWLDHEIALVRPRLILAMGGTAAESLTGSRTGL-LK 428

Query: 212 NLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKKN----TWHALITLKKALK 259
             G+           P   TVHP  +++   P  KK+        L  + + L 
Sbjct: 429 RRGRIEETDRG----PVFLTVHPSYILRLPDPARKKDETERFREDLAEVARTLA 478


>gi|257075752|ref|ZP_05570113.1| DNA polymerase [Ferroplasma acidarmanus fer1]
          Length = 321

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 74/165 (44%), Gaps = 10/165 (6%)

Query: 93  CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML-QSIEIMRTQIH 151
              S S +         + I+G  P  +++I  KPF G++G +L+ ++   + + R  ++
Sbjct: 160 WDLSTSFVPGEGNLNAAIFIVGQAPGRNEDIMKKPFVGRSGKLLESLITDELHMDRESLY 219

Query: 152 ISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQ 211
           I+ +  + PP NR  S+ E+ +C P +M+QIE+++P I++ +G           +    +
Sbjct: 220 ITSVVQFFPPENRAPSDDEIALCLPYLMKQIEIVNPAIIVLLGAVAARTLVQVKS--IMK 277

Query: 212 NLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
             GK               T+HP   ++ P   +        L+K
Sbjct: 278 EHGKLFMDKY-------FVTLHPAAALRNPANVEIMRSDFRALEK 315


>gi|167899873|ref|ZP_02487274.1| uracil-DNA glycosylase, family 4 [Burkholderia pseudomallei 7894]
          Length = 185

 Score =  109 bits (271), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 68/167 (40%), Gaps = 13/167 (7%)

Query: 92  LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH 151
           L   +   +         +M++G  P + ++  G PF G  G +L++ L +  + R  ++
Sbjct: 1   LWEHATQAVPGAGPPRAAIMLVGEQPGNQEDREGAPFVGPAGRVLERALAAAGLDRASVY 60

Query: 152 ISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204
           ++                ++  +  E++ CR  + R+++ + P++++ +G        ++
Sbjct: 61  VTNAVKHFKWAPRGKRRMHKTPAQQEIDACRYWLERELDALEPRVVVALGAIALKAVLDD 120

Query: 205 DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKKNTWH 249
              +    +G    +         +AT HP  +++   P  +K  + 
Sbjct: 121 RHARLQPAMG----VVQSAGGRYVIATYHPSFVLRVPDPDARKRAYA 163


>gi|255321596|ref|ZP_05362754.1| uracil-DNA glycosylase family protein [Campylobacter showae RM3277]
 gi|255301452|gb|EET80711.1| uracil-DNA glycosylase family protein [Campylobacter showae RM3277]
          Length = 209

 Score =  108 bits (270), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 79/192 (41%), Gaps = 7/192 (3%)

Query: 67  ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126
           + S+A    SL EL + ++  + C LC ++   +     +   ++ +   P+ +++ SG+
Sbjct: 25  SPSLAALPRSLAELNASIKECNLCDLCKSANHALTGLGDKSAKVVFVFDAPNTAEDASGE 84

Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186
             +G     L  + +   + + +I+++ +    P      +  E+  C P    +  L++
Sbjct: 85  FLAGDD-KFLQNLNELAGLKKDEIYVTSLLKCKPAAKVPTNAYEL--CEPYFSAEARLVA 141

Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKN 246
           PK+++ +G +         AQ      G              LAT  P  + + P  K+ 
Sbjct: 142 PKLIVALGEEVFYKMIKQSAQSFETIRGNIMKFKHSA----LLATYSPTVVAKNPSKKEL 197

Query: 247 TWHALITLKKAL 258
            +  L  +K+ L
Sbjct: 198 FFSDLKKIKEYL 209


>gi|154174717|ref|YP_001408439.1| uracil-DNA glycosylase superfamily protein [Campylobacter curvus
           525.92]
 gi|112802955|gb|EAU00299.1| putative uracil-DNA glycosylase superfamily [Campylobacter curvus
           525.92]
          Length = 223

 Score =  107 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 74/189 (39%), Gaps = 8/189 (4%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG- 133
             L+EL   +     C L  T+  TI     +   +M +   PS S++  G+   G  G 
Sbjct: 38  SDLNELNKQISHCALCTLRKTANRTILGLGDKSSKVMFVSLAPSISEDQEGEHLCGMAGV 97

Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSN---IEMEICRPIIMRQIELISPKIL 190
            + + +  S+ + + + +IS I       +   +      +E+CRP ++ +I L+ PK++
Sbjct: 98  KLCEMIYNSLGLRKGEFYISSILRCKFLPSETQNAAINECLELCRPYLLEEIRLLKPKVI 157

Query: 191 LFIGNKTKNFFFNNDAQKTYQN-LGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249
           + +G      F N   +   +N              I  + T     L++ P  +     
Sbjct: 158 VALGE---QVFLNLYPESLLKNSFESIRGSVLKFGDISVMPTYSHAWLMKNPSFESVFLD 214

Query: 250 ALITLKKAL 258
            L  +K  +
Sbjct: 215 DLRKIKGMI 223


>gi|108804621|ref|YP_644558.1| uracil-DNA glycosylase superfamily protein [Rubrobacter
           xylanophilus DSM 9941]
 gi|108765864|gb|ABG04746.1| Uracil-DNA glycosylase superfamily [Rubrobacter xylanophilus DSM
           9941]
          Length = 196

 Score =  107 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 69/173 (39%), Gaps = 18/173 (10%)

Query: 100 ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH 159
           +      G  L I+G  P   +   G+PF G+ G +LD++L+   I R++++++ +    
Sbjct: 23  VFGEGEPGARLAIVGEAPGGREVELGRPFVGRAGRLLDELLEEAGIDRSEVYVTNLVKVR 82

Query: 160 PPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN 212
           P         NR     E+     ++  ++  I P  L+ +G+       +  +    + 
Sbjct: 83  PTKESGGRIQNRPPRAGEVREGLEVLEEELRAIGPGALVLLGSTPAKALID-RSFTMREG 141

Query: 213 LGKWSNLCTPHSIIPTLATVHPQELIQ--------YPLIKKNTWHALITLKKA 257
            G+          +P LAT HP  L++        Y  +++     L T  + 
Sbjct: 142 RGRIFESKI--LGLPALATYHPAYLLRVRGAGGADYGRLRRQVVEDLRTAWER 192


>gi|86738798|ref|YP_479198.1| phage SPO1 DNA polymerase-related protein [Frankia sp. CcI3]
 gi|86565660|gb|ABD09469.1| phage SPO1 DNA polymerase-related protein [Frankia sp. CcI3]
          Length = 216

 Score =  107 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 65/184 (35%), Gaps = 11/184 (5%)

Query: 72  QKACSLHELKSLLRSFHDCHLCS-TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130
                L  L +       C L       T+         L ++G  P D ++  G PF G
Sbjct: 7   PPRADLPTLAAAAADCQGCDLAQLPGTRTVFGVGPAHSWLALVGEQPGDIEDRRGVPFVG 66

Query: 131 KTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEME--------ICRPIIMRQI 182
             G +LD+ L  + + R +++ +           N      +         CRP +  ++
Sbjct: 67  PAGKLLDRALGEVGLDRAEVYTTNAVKHFRYRTGNGPRRIHQTPDLRHVTACRPWLSAEL 126

Query: 183 ELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL 242
            L+ P I++ +G            +   +  G+        S    LAT+HP  +++   
Sbjct: 127 NLVRPAIVVILGATAGMSLLGPSFRV-TKMRGRLLPGP-AGSGAQLLATLHPSAVLRADP 184

Query: 243 IKKN 246
            +++
Sbjct: 185 ARRD 188


>gi|223039687|ref|ZP_03609973.1| putative uracil-DNA glycosylase superfamily [Campylobacter rectus
           RM3267]
 gi|222879070|gb|EEF14165.1| putative uracil-DNA glycosylase superfamily [Campylobacter rectus
           RM3267]
          Length = 209

 Score =  107 bits (267), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 78/192 (40%), Gaps = 7/192 (3%)

Query: 67  ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126
           + S      SL EL + ++  + C LC ++   +     +   ++ +   P+ +++ SG+
Sbjct: 25  SPSSVALPSSLAELNASIKECNLCELCKSANHALAGLGDKSAKVIFVFDAPNAAEDASGE 84

Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186
             +G     L  + +   + + +I+++ +    P      S  E  +C P    ++ LI+
Sbjct: 85  FLAGDD-KFLQNLNEMAGLKKDEIYVTSLLKCKPAAKAPASAYE--LCEPYFSAEVRLIA 141

Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKN 246
           PK+++ +G +         AQ      G              LAT  P  + + P  K+ 
Sbjct: 142 PKLIVALGEEVFYKMIKQSAQSFEAIRGNIMKFKHSA----LLATYSPTVIAKNPSKKEL 197

Query: 247 TWHALITLKKAL 258
            +  L  +K+ L
Sbjct: 198 FFSDLKKIKEYL 209


>gi|125975587|ref|YP_001039497.1| uracil-DNA glycosylase superfamily protein [Clostridium
           thermocellum ATCC 27405]
 gi|256005908|ref|ZP_05430853.1| Uracil-DNA glycosylase superfamily [Clostridium thermocellum DSM
           2360]
 gi|281416599|ref|ZP_06247619.1| Uracil-DNA glycosylase superfamily [Clostridium thermocellum JW20]
 gi|125715812|gb|ABN54304.1| Uracil-DNA glycosylase superfamily [Clostridium thermocellum ATCC
           27405]
 gi|255990112|gb|EEU00249.1| Uracil-DNA glycosylase superfamily [Clostridium thermocellum DSM
           2360]
 gi|281408001|gb|EFB38259.1| Uracil-DNA glycosylase superfamily [Clostridium thermocellum JW20]
 gi|316939706|gb|ADU73740.1| Uracil-DNA glycosylase superfamily [Clostridium thermocellum DSM
           1313]
          Length = 192

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 65/168 (38%), Gaps = 9/168 (5%)

Query: 97  LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156
              +         L++IG  P   + +  KPF G  G  L + L  + + R  I+I+   
Sbjct: 21  REIVLGDGNVNSRLVLIGEAPGKDEVLKSKPFVGAAGKNLAEFLDVLGLKREDIYITNAI 80

Query: 157 PWHPPG---------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207
            +             NR  +  E+   R  ++++IE+I+P+ ++ +GN      + + + 
Sbjct: 81  KYRLSKVKPETNRVSNRPATKNEILENRSYLLKEIEIINPEYIVTLGNVPLRSVYGDFSI 140

Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
              +  G  + +    +        HP  +I    +K+     L  L+
Sbjct: 141 SIGEVHGTLTRVEVLGTEFNLFPLYHPASIIYNVKLKEIYNEDLNKLR 188


>gi|332290148|ref|YP_004421000.1| Uracil DNA glycosylase superfamily [Gallibacterium anatis UMN179]
 gi|330433044|gb|AEC18103.1| Uracil DNA glycosylase superfamily [Gallibacterium anatis UMN179]
          Length = 179

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 62/164 (37%), Gaps = 4/164 (2%)

Query: 98  STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP 157
             + A      ++M IG  P   + I G PF+G +G   D++L SI + R  I+++ +  
Sbjct: 19  QLVPAWGNPHAEIMFIGDAPGKDELIKG-PFAGTSGKFFDQLLASIGLRRENIYLTNVVK 77

Query: 158 WHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS 217
           +           E+     ++  +I  I PKI++  G    + F      K  +  G+  
Sbjct: 78  FRAEKRDPNKK-EIMAFNGLLRAEIAKIKPKIIVPCGRIALSVFL--PEFKISEIHGQVY 134

Query: 218 NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
            L         L   HP   +    ++       +TL     NL
Sbjct: 135 TLMQEQHCFQLLPMYHPAAAMHNGKMRPMLKQDFLTLGDVWNNL 178


>gi|118474440|ref|YP_891737.1| uracil-DNA glycosylase superfamily protein [Campylobacter fetus
           subsp. fetus 82-40]
 gi|118413666|gb|ABK82086.1| uracil-DNA glycosylase superfamily, putative [Campylobacter fetus
           subsp. fetus 82-40]
          Length = 213

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 67/184 (36%), Gaps = 7/184 (3%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            +L  L+  +++ + C LC +    +   +    ++M++   PS  ++ +G        +
Sbjct: 37  SNLKRLEEQIKNCNLCELCKSRNKAVLGGKEASSNVMLVENFPSFDEDKNGSA---AFND 93

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
            L + L   +I   +++ + +    P  +  L +   + C     ++ +++ PK+++  G
Sbjct: 94  ELKECLNLAQIDIQKLYFTHMLKCRPKDDMILKDTWYDQCYSYFEQEFDIVKPKLIISFG 153

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
                    +         G              + T     +I+ P  K+     L  +
Sbjct: 154 KDVFFRITKDRNCAFESVRGGIFKFKNS----LIMPTYSAFWIIKNPSHKQKFIDDLKKI 209

Query: 255 KKAL 258
           K  L
Sbjct: 210 KGYL 213


>gi|58578289|emb|CAI48083.1| hypothetical protein [uncultured bacterium]
          Length = 208

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 62/134 (46%)

Query: 57  RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYT 116
           +   SP  +       +  + H L     +   C L  T  + +    +    ++ +G  
Sbjct: 41  KRPPSPARKNKPDGRDRGEAFHALSLEAANCCQCPLAQTRKNVVFGAGSLSAQVVFVGEA 100

Query: 117 PSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP 176
           P   ++  G PF GK G +L  ++ ++ + R +++I  I    PPGNR     E+ +C P
Sbjct: 101 PGADEDEQGLPFVGKAGQLLTNIITAMGLTRKEVYICNILKCRPPGNRTPLPEEIRLCEP 160

Query: 177 IIMRQIELISPKIL 190
            + RQ+ LI+P+IL
Sbjct: 161 FLKRQLSLIAPQIL 174


>gi|48477991|ref|YP_023697.1| DNA polymerase [Picrophilus torridus DSM 9790]
 gi|48430639|gb|AAT43504.1| DNA polymerase, bacteriophage-type [Picrophilus torridus DSM 9790]
          Length = 326

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 75/169 (44%), Gaps = 7/169 (4%)

Query: 93  CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHI 152
            S S + +        +++ IG +P  +++ + +PF+G+ G  L+ +L+   + R ++++
Sbjct: 161 WSMSRNYVPGEGNLNSEVIFIGQSPGFNEDETRRPFTGRAGLFLNSLLKMAGLERNRVYL 220

Query: 153 SMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN 212
           + +  +    NR  +  E+E   P ++R+I++I PK+++ +G+   N F           
Sbjct: 221 TNVLKFMTYKNRPPNKHEIENAMPYLLREIDIIRPKLIVLMGSTAVNAFL--PKHSVTLY 278

Query: 213 LGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
            GK       +  +    T+HP   +               L   +K++
Sbjct: 279 HGKLI-----NDRMKFYITLHPASALHVLQNMPLIEEDFRNLGIIIKDM 322


>gi|205372507|ref|ZP_03225320.1| uracil-DNA glycosylase family protein [Bacillus coahuilensis m4-4]
          Length = 211

 Score =  105 bits (263), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 40/189 (21%), Positives = 74/189 (39%), Gaps = 27/189 (14%)

Query: 99  TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158
            +    +  + +MI+G  P +++ I G PF G++G +LD ML+ I + R  ++I+     
Sbjct: 22  FVAYGGSFKEHIMIVGEAPGENEAIQGLPFIGRSGKVLDAMLEEIGVDRQDVYITSAVKS 81

Query: 159 HPPG---------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
            P                 NR  +  E+    P++  +++ I P++++ +G    N    
Sbjct: 82  RPFQWKEKKLQRAWVCKKYNRPPTIEEVLAHAPVLDYELDRIQPRLIITLGRVGWNRVSG 141

Query: 204 NDAQKTYQNLGKWS-----------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
           + A    +  GK              L             HP  L+  P +K+     L 
Sbjct: 142 STA-MMSKIHGKLHTGPILRMNGNEELEYSQKSYRVFPLYHPASLLYKPSLKEEMKKDLT 200

Query: 253 TLKKALKNL 261
           TLK  L  +
Sbjct: 201 TLKALLLEM 209


>gi|296532159|ref|ZP_06894920.1| family 4 uracil-DNA glycosylase [Roseomonas cervicalis ATCC 49957]
 gi|296267518|gb|EFH13382.1| family 4 uracil-DNA glycosylase [Roseomonas cervicalis ATCC 49957]
          Length = 189

 Score =  105 bits (262), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 69/157 (43%), Gaps = 11/157 (7%)

Query: 93  CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHI 152
            +   +T+         LM++G  P D+++  G+PF G  G +LD+ L +  + R   ++
Sbjct: 12  WAAGHTTVLGEGPPQAPLMLVGEQPGDAEDRQGRPFVGPAGRLLDRALLAAGLDRAACYL 71

Query: 153 SMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
           +                ++   + ++ + RP ++R+++ ++P++++ +G           
Sbjct: 72  TNAVKHFKFTQRGARRIHQKPDSGDIALYRPFLLREVDAVAPRLIVALGATAAQGLLGRK 131

Query: 206 AQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL 242
                +  G++    +     P L TVHP  L++ P 
Sbjct: 132 -IGVLKLRGQFL---SGPDDRPMLLTVHPSFLLRLPD 164


>gi|325523775|gb|EGD02024.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp. TJI49]
          Length = 164

 Score =  105 bits (262), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 1/117 (0%)

Query: 53  ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMI 112
                   +P   +A            L + +     C LC    +T+        D M+
Sbjct: 48  AAPPGDPVAPAESRAAETPVAMLDWDALAARVADCTRCRLCEKRTNTVFGVGDREADWML 107

Query: 113 IGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR-TQIHISMISPWHPPGNRNLSN 168
           +G  P ++++  G+PF G+ G +LD ML+S+ + R   ++I+ +    PPGNRN   
Sbjct: 108 VGEAPGENEDKQGEPFVGQAGKLLDNMLRSLSLERGRNVYIANVIKCRPPGNRNPEP 164


>gi|296444847|ref|ZP_06886809.1| Uracil-DNA glycosylase superfamily [Methylosinus trichosporium
           OB3b]
 gi|296257515|gb|EFH04580.1| Uracil-DNA glycosylase superfamily [Methylosinus trichosporium
           OB3b]
          Length = 175

 Score =  105 bits (261), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 3/176 (1%)

Query: 84  LRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142
           L +F  C  L + +   + A    G  LM++ + P + D  SG+ F G    +LDKML++
Sbjct: 1   LAAFDGCAQLKAAAAHFLYAAGAPGAPLMVLDFAPGEEDERSGEAFVGAEARLLDKMLKA 60

Query: 143 IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202
           I   R   +++  +PW PPG R L+  E+   +P + R +EL +PKILL +G+       
Sbjct: 61  IGQKRESAYLAYATPWRPPGARELNAGEVTALQPFLRRHVELAAPKILLILGDYAARAAL 120

Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
                   +  G+W +     S    L       L++ P +K+  W  L  L  AL
Sbjct: 121 GAT--DVAKLRGQWFDYDAGASRPRALLASSLDNLLKTPALKRRAWRDLRALAAAL 174


>gi|259418076|ref|ZP_05741995.1| uracil-DNA glycosylase [Silicibacter sp. TrichCH4B]
 gi|259346982|gb|EEW58796.1| uracil-DNA glycosylase [Silicibacter sp. TrichCH4B]
          Length = 134

 Score =  105 bits (261), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 36/115 (31%), Positives = 63/115 (54%), Gaps = 1/115 (0%)

Query: 56  IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115
           ++      V +A  +A+ A +L  L++ L +F  C L   + + + +    G  +MIIG 
Sbjct: 1   MKPKSVDPVAEAVKLAKSADALPGLRAALETFEHCDLKRGARNLVFSDGQAGARVMIIGE 60

Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI-HISMISPWHPPGNRNLSNI 169
            P   +++ GKPF G+ G +LDKML +I++ R +  +I+ + PW PP NR+    
Sbjct: 61  APGRDEDLQGKPFVGRAGQLLDKMLAAIDLSRDENVYITNVLPWRPPQNRDPLPA 115


>gi|84687727|ref|ZP_01015599.1| putative uracil-DNA glycosylase [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84664228|gb|EAQ10720.1| putative uracil-DNA glycosylase [Rhodobacterales bacterium
           HTCC2654]
          Length = 426

 Score =  105 bits (261), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 67/191 (35%), Gaps = 9/191 (4%)

Query: 32  NNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCH 91
             +    +Q + + +  A   +   R             A  A       + L +   C 
Sbjct: 238 IPDLIATAQTRAREMAEAAPTLAPARAEKVVARVAQAQEALTASQ-DRFHAALDACTRCP 296

Query: 92  LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH 151
           L + +   +         LM +G  P D +++ G+PF G  G + D+ L S  I R   +
Sbjct: 297 LHTNATQAVPGEGPADAPLMFVGEQPGDREDLEGRPFVGPAGQLFDRALASAGIARDTAY 356

Query: 152 ISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204
           ++                ++  +  E++ CR  +  + E +SP +++ +G         +
Sbjct: 357 VTNAVKHFKFTPRGKRRLHQAPNRDEIDHCRWWLDFERERVSPDLVVALGATALESLTGS 416

Query: 205 DAQKTYQNLGK 215
                 +  G+
Sbjct: 417 RKDL-LKRRGR 426


>gi|34557601|ref|NP_907416.1| hypothetical protein WS1236 [Wolinella succinogenes DSM 1740]
 gi|34483318|emb|CAE10316.1| hypothetical protein WS1236 [Wolinella succinogenes]
          Length = 250

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 94/251 (37%), Gaps = 13/251 (5%)

Query: 10  EQILTIALFY-ADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQAD 68
           + + ++  FY   + ++ ++         +  ++  S    I+P T+   +       A+
Sbjct: 11  QDLFSLIDFYPFFAKIFAMYRLEKMLQLKKLYQERASGRCYIEPFTHASPLG------AE 64

Query: 69  SIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128
            ++     L  L+ ++ S   C L       I         ++ +  TP          F
Sbjct: 65  GVSHLPEGLLSLQGIIESCVLCELSKGEGKPIFGMCQTTSKVVFVSETPLVDPKH-PSMF 123

Query: 129 SGKTGNMLDKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP 187
            G++G ML  +++++  +   ++ +  +   HP   + + +     C+P I++QI+L+  
Sbjct: 124 VGRSGEMLRNIVRNVLGLKEGEVSLLSLLKCHPSLAQKVDSALFSSCKPYILKQIDLLPL 183

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247
             ++    +    +  ++     Q  G+     +  +    +       L++ P  KK  
Sbjct: 184 SAIIVPLGEVAYRYLTDERGDFSQYRGQ----KSVWAGRTLIPAHSLSYLLRNPTAKKEA 239

Query: 248 WHALITLKKAL 258
               + +K  L
Sbjct: 240 LKDFLLIKSCL 250


>gi|149200263|ref|ZP_01877284.1| phage SPO1 DNA polymerase-related protein [Lentisphaera araneosa
           HTCC2155]
 gi|149136627|gb|EDM25059.1| phage SPO1 DNA polymerase-related protein [Lentisphaera araneosa
           HTCC2155]
          Length = 289

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 50/289 (17%), Positives = 95/289 (32%), Gaps = 59/289 (20%)

Query: 6   ILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQ 65
            LS EQ+     F A+         PN E   + +   +   + ++  TN++    P V 
Sbjct: 23  DLSHEQLNDFFYFQAE----VPLTFPNCEKLSDEELPCEEATAEVKAKTNVKTHSVPPVL 78

Query: 66  QADSIAQKACS-------------------------------LHELKSLLRSFHDCHLCS 94
           Q     +                                   L +L+S   S   C L  
Sbjct: 79  QEKLELKAPNEVPIRKLGINKEAEETQVEVAIEEKIDLSSLPLDDLRSKALSCKKCLLSF 138

Query: 95  TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154
                  A       +M +        ++   PF+G TG+   K+L ++++    ++I+ 
Sbjct: 139 ND----PAETN-QAKVMFVLDASLIKGDLQD-PFAGPTGDFFKKILSAMKLDMKDVYIAN 192

Query: 155 ISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLG 214
           I            + E++     I++Q++LI P+  +            ++ +   Q  G
Sbjct: 193 IHRC-------PRSSELKEQSAAILQQMKLIKPQACVVCSPSIIRAI--SEYESINQCRG 243

Query: 215 KWSNLCTPHSIIPTLATVHPQELIQYPL-----IKKNTWHALITLKKAL 258
           KW N       +  + +  P  L++         KK  W  L  + K L
Sbjct: 244 KWINW----DGVKIMPSYSPAFLMRSENVYGKVKKKEAWSDLQLVMKEL 288


>gi|168188017|ref|ZP_02622652.1| uracil DNA glycosylase superfamily protein [Clostridium botulinum C
           str. Eklund]
 gi|169294138|gb|EDS76271.1| uracil DNA glycosylase superfamily protein [Clostridium botulinum C
           str. Eklund]
          Length = 222

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 64/174 (36%), Gaps = 18/174 (10%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
                  D++ +G  P  ++   GKPF G  G      L+SI + R+ I I+    + P 
Sbjct: 53  GDGPIPSDILFVGEAPGKNEVEQGKPFVGMAGETFSNYLKSIGLNRSNIRITNTCFFRPI 112

Query: 162 G------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209
                        NR     E+ + R ++  +I L++PKI++ +GN         + +  
Sbjct: 113 KRKTGKTGRVTVSNRPPKVSEVNLFREVLDDEINLVNPKIIITLGNVPLKRL--TEFKSI 170

Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIKKNTWHALITLKKALKNL 261
               G                  HP  L   +    K    +  + LK+ALK L
Sbjct: 171 GDCHGNL--YYNESLKRHVFPMYHPSALTYNRNVEFKSMYENDWLKLKEALKTL 222


>gi|300853328|ref|YP_003778312.1| putative uracil DNA glycosylase [Clostridium ljungdahlii DSM 13528]
 gi|300433443|gb|ADK13210.1| predicted Uracil DNA glycosylase [Clostridium ljungdahlii DSM
           13528]
          Length = 198

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/176 (23%), Positives = 63/176 (35%), Gaps = 18/176 (10%)

Query: 100 ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH 159
           I        +++ IG  P  ++   GKPF G  G      L SI + R  I I+      
Sbjct: 27  IFGDGPIPCNILFIGEAPGKTEVEQGKPFVGMAGKTFGSYLNSIGLQRDNIRITNTCFLR 86

Query: 160 PPG------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207
           P              NR     E+E+ + I+ R+IEL++PKI++ +GN     F      
Sbjct: 87  PIKINQGKNGRKTISNRPPKTSEIELFKDILNREIELVNPKIIVTLGNTPLKRF--TKFN 144

Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIKKNTWHALITLKKALKNL 261
              +  GK                 HP  L   +    K    +    LK  L ++
Sbjct: 145 SIGECHGKI--YFNEDLKKDIFPMYHPSALTYNRNDSFKLMYENDWKKLKNTLNSI 198


>gi|289523988|ref|ZP_06440842.1| uracil-DNA glycosylase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289502644|gb|EFD23808.1| uracil-DNA glycosylase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 196

 Score =  103 bits (257), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 57/161 (35%), Gaps = 3/161 (1%)

Query: 80  LKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKM 139
           L+S + S   C L       I      G  + ++G  P D++ ++G+PF G TG  L   
Sbjct: 4   LESQIMSCERCDLALKRKRAIPGEGPLGARVFLLGQAPFDAEEMNGRPFWGVTGAFLRYF 63

Query: 140 LQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199
           L    +   +   + +     P        +++ C P +  +IE + PK+++ +G     
Sbjct: 64  LGRAGVNFYECWRTNLLKCPLPRYGRPKWRQIDACLPYLKEEIECVRPKVIVPLGKWALK 123

Query: 200 ---FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237
                F     +   ++                   HP  L
Sbjct: 124 GLFALFGLPRPEKNSSIPSLFGKPLGVGEYVLFPLPHPASL 164


>gi|322804313|emb|CBZ01863.1| uracil-DNA glycosylase family protein,clostridial type [Clostridium
           botulinum H04402 065]
          Length = 198

 Score =  102 bits (253), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 74/198 (37%), Gaps = 18/198 (9%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
             LK+ +++  + ++   +   I        D++ IG  P  ++   GKPF G  G   +
Sbjct: 5   ESLKNKIKNISEEYVGDKTGGYITGDGPIPCDILFIGEAPGKNEVEEGKPFVGMAGKNFE 64

Query: 138 KMLQSIEIMRTQIHISMISPWHPPG------------NRNLSNIEMEICRPIIMRQIELI 185
           K L SI + R  I I+    + P              NR     E+ +   I+  +I L+
Sbjct: 65  KYLNSIGLKREFIRITNTCFFRPIKIKEGKNGRISISNRPPKVSEISLFSSILDEEINLV 124

Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK- 244
           +PK+++ +GN       +  +       G        +         HP  L      + 
Sbjct: 125 NPKLIITLGNVPLKRLTSFKS--IGDCHGNI--YFIENLNRYVFPMYHPSALTYNRSEEF 180

Query: 245 -KNTWHALITLKKALKNL 261
            K   +  + L++AL  +
Sbjct: 181 HKIYENDWVKLREALDKI 198


>gi|118443398|ref|YP_879247.1| uracil DNA glycosylase [Clostridium novyi NT]
 gi|118133854|gb|ABK60898.1| Uracil DNA glycosylase superfamily protein [Clostridium novyi NT]
          Length = 223

 Score =  102 bits (253), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 37/174 (21%), Positives = 62/174 (35%), Gaps = 18/174 (10%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
                  D++ +G  P  ++   GKPF G  G      L+SI + R+ I I+    + P 
Sbjct: 54  GDGPIPSDILFVGEAPGKNEVEQGKPFVGMAGETFSNYLKSIGLDRSNIRITNTCFFRPI 113

Query: 162 G------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209
                        NR     E+ + R ++  +I L++PKI++ +GN         + +  
Sbjct: 114 KRKTGKTGRVTVSNRPPKVSEVNLFREVLDDEINLVNPKIIITLGNVPLKRL--TEFKSI 171

Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQ--YPLIKKNTWHALITLKKALKNL 261
               G                  HP  L        K    +  + LK+ LK L
Sbjct: 172 GDCHGNL--YYNESLKRYVFPMYHPSALTYNKNDEFKAMYENDWLKLKEVLKTL 223


>gi|168185243|ref|ZP_02619907.1| uracil-DNA glycosylase family protein [Clostridium botulinum Bf]
 gi|237793355|ref|YP_002860907.1| uracil-DNA glycosylase family protein [Clostridium botulinum Ba4
           str. 657]
 gi|182671710|gb|EDT83671.1| uracil-DNA glycosylase family protein [Clostridium botulinum Bf]
 gi|229262917|gb|ACQ53950.1| uracil-DNA glycosylase family protein [Clostridium botulinum Ba4
           str. 657]
          Length = 198

 Score =  102 bits (253), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 72/198 (36%), Gaps = 18/198 (9%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
             LK+ +R+  + ++   +   I        D++ IG  P  ++   GKPF G  G   +
Sbjct: 5   ESLKNKIRNISEEYVGDKTGGYITGDGPIPCDILFIGEAPGKNEVEEGKPFVGMAGKNFE 64

Query: 138 KMLQSIEIMRTQIHISMISPWHPPG------------NRNLSNIEMEICRPIIMRQIELI 185
           K L  I + R  I I+    + P              NR     E+ +   I+  +I L+
Sbjct: 65  KYLNFIGLKRESIRITNTCFFRPIKIKEGKNGRISISNRPPKVSEISLFSSILDEEINLV 124

Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK- 244
           +PK+++ +GN       +  +       G        +         HP  L      + 
Sbjct: 125 NPKLIITLGNVPLKTLTSFKS--IGDCHGNI--YFIENLNRYVFPMYHPSALTYNRSEEF 180

Query: 245 -KNTWHALITLKKALKNL 261
            K   +    L++AL  +
Sbjct: 181 HKIYENDWAKLREALDKI 198


>gi|310830327|ref|YP_003965427.1| Uracil-DNA glycosylase superfamily [Ketogulonicigenium vulgare Y25]
 gi|308753233|gb|ADO44376.1| Uracil-DNA glycosylase superfamily [Ketogulonicigenium vulgare Y25]
          Length = 476

 Score =  101 bits (252), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 77/218 (35%), Gaps = 11/218 (5%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P      E + ++    +   P    ++I +       +      +L + ++       C
Sbjct: 238 PAMLRDAERRVRQMHEAAGSMPDLGAQNISARYRAAMPAAPDLPETLEQAEAAAAQCRRC 297

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150
           +LC  +  T+         LMI+G  P D ++++G PF G  G +L + +    +   Q+
Sbjct: 298 NLCEAATQTVWGRGAPDAALMIVGEQPGDHEDLAGVPFVGPAGQVLHRAMAEARLATDQV 357

Query: 151 HISMISPW-----HPPGNRNLSNI--EMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
            ++                + S    E+  CR  +  ++  I P++ + +G         
Sbjct: 358 WLTNAVKHFKFAPRGKQRMHKSPDGPEIAQCRWWLGLELAFIKPRLTVALGATAAAAL-T 416

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241
            D        G    + T     P L   HP  +++ P
Sbjct: 417 GDTSPLAARRG---AIETGLHGGPVLIAWHPSYILRLP 451


>gi|168181181|ref|ZP_02615845.1| uracil-DNA glycosylase family protein [Clostridium botulinum NCTC
           2916]
 gi|226947259|ref|YP_002802350.1| uracil-DNA glycosylase family protein [Clostridium botulinum A2
           str. Kyoto]
 gi|182667981|gb|EDT79960.1| uracil-DNA glycosylase family protein [Clostridium botulinum NCTC
           2916]
 gi|226841767|gb|ACO84433.1| uracil-DNA glycosylase family protein [Clostridium botulinum A2
           str. Kyoto]
          Length = 198

 Score =  101 bits (252), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 63/174 (36%), Gaps = 18/174 (10%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
                  D++ IG  P  ++   GKPF G  G   +K L SI + R  I I+    + P 
Sbjct: 29  GDGPIPCDILFIGEAPGKNEVEEGKPFVGMAGKNFEKYLNSIGLKREFIRITNTCFFRPI 88

Query: 162 G------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209
                        NR     E+ +   I+  +I L++PK+++ +GN       +  +   
Sbjct: 89  KIKEGKNGRISISNRPPKVSEISLFSSILDEEINLVNPKLIITLGNVPLKRLTSFKS--I 146

Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK--KNTWHALITLKKALKNL 261
               G        +         HP  L      +  K   +  + L++AL  +
Sbjct: 147 GDCHGNI--YFIENLNRYVFPMYHPSALTYNRSEEFHKIYENDWVKLREALDKI 198


>gi|153939172|ref|YP_001389406.1| uracil-DNA glycosylase family protein [Clostridium botulinum F str.
           Langeland]
 gi|152935068|gb|ABS40566.1| uracil-DNA glycosylase family protein [Clostridium botulinum F str.
           Langeland]
 gi|295317514|gb|ADF97891.1| uracil-DNA glycosylase family protein [Clostridium botulinum F str.
           230613]
          Length = 198

 Score =  101 bits (252), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 63/174 (36%), Gaps = 18/174 (10%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
                  D++ IG  P  ++   GKPF G  G   +K L SI + R  I I+    + P 
Sbjct: 29  GDGPIPCDILFIGEAPGKNEVEEGKPFVGMAGKNFEKYLNSIGLKREFIRITNTCFFRPI 88

Query: 162 G------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209
                        NR     E+ +   I+  +I L++PK+++ +GN       +  +   
Sbjct: 89  KIKEGKNGRISISNRPPKVSEISLFSSILDEEINLVNPKLIITLGNVPLKRLTSFKS--I 146

Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK--KNTWHALITLKKALKNL 261
               G        +         HP  L      +  K   +  + L++AL  +
Sbjct: 147 GDCHGNI--YFIENLNRYVFPMYHPSALTYNRSEEFHKIYENDWVKLREALDKI 198


>gi|323529497|ref|YP_004231649.1| Uracil-DNA glycosylase superfamily [Burkholderia sp. CCGE1001]
 gi|323386499|gb|ADX58589.1| Uracil-DNA glycosylase superfamily [Burkholderia sp. CCGE1001]
          Length = 519

 Score =  101 bits (252), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 64/202 (31%), Gaps = 37/202 (18%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQ-------------------------TEGQD 109
             L +    L +   C L   +   +                                  
Sbjct: 296 PPLRKPAGALDTCRRCALWRNAKRAVPGVGAGMGASCGAGLGFDAGVGVGAGVGVGASAG 355

Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPG 162
           +MI+G  P + +N  G PF+G  G +LD +L    + R  ++++     +          
Sbjct: 356 IMIVGEQPGEHENEHGVPFTGPAGRLLDSVLARAGLDRASLYLTYAVKHYKWEIVGHERI 415

Query: 163 NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP 222
           +R  +  E+E C+  + +++  ++P++++ +G                            
Sbjct: 416 HRTPAQREVEACQYWLEKELAELAPRVVVALGATALKALTGAHVNLPEYVGRAIH----- 470

Query: 223 HSIIPTLATVHPQELIQYPLIK 244
           H     + T HP   ++    +
Sbjct: 471 HGGRIIVPTWHPAFALRTGNAR 492


>gi|187777502|ref|ZP_02993975.1| hypothetical protein CLOSPO_01085 [Clostridium sporogenes ATCC
           15579]
 gi|187774430|gb|EDU38232.1| hypothetical protein CLOSPO_01085 [Clostridium sporogenes ATCC
           15579]
          Length = 198

 Score =  100 bits (250), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/195 (21%), Positives = 73/195 (37%), Gaps = 18/195 (9%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
             LK+ +++  + ++   +   I        D++ IG  P  ++   GKPF G  G   +
Sbjct: 5   ESLKNKIKNISEEYIGDKTGGYITGDGPIPCDILFIGEAPGKNEVEEGKPFVGMAGKNFE 64

Query: 138 KMLQSIEIMRTQIHISMISPWHPPG------------NRNLSNIEMEICRPIIMRQIELI 185
           K L SI + R  I I+    + P              NR     E+ +   I+  +I L+
Sbjct: 65  KYLNSIGLKRESIRITNTCFFRPIKIKEGKNGRISISNRPPKVSEISLFSSILDEEINLV 124

Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK- 244
           +PK+++ +GN       N  +       G        +         HP  L      + 
Sbjct: 125 NPKLIITLGNVPLKRLTNFKS--IGDCHGNV--YFVENLSRYVFPMYHPSSLTYNRSEEF 180

Query: 245 -KNTWHALITLKKAL 258
            K   +  + LK+AL
Sbjct: 181 HKIYENDWLKLKEAL 195


>gi|170757429|ref|YP_001779667.1| uracil-DNA glycosylase family protein [Clostridium botulinum B1
           str. Okra]
 gi|169122641|gb|ACA46477.1| uracil-DNA glycosylase family protein [Clostridium botulinum B1
           str. Okra]
          Length = 198

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 62/174 (35%), Gaps = 18/174 (10%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
                  D++ IG  P  ++   GKPF G  G   +K L SI + R  I I+    + P 
Sbjct: 29  GDGPIPCDILFIGEAPGKNEVEEGKPFVGMAGKNFEKYLNSIGLKRELIRITNTCFFRPI 88

Query: 162 G------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209
                        NR     E+ +   I+  +I L++PK+++ +GN       +  +   
Sbjct: 89  KIKEGKNGRISISNRPPKASEISLFSSILDEEINLVNPKLIITLGNVPLKRLTSFKS--I 146

Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK--KNTWHALITLKKALKNL 261
               G        +         HP  L      +  K   +  + L++ L  +
Sbjct: 147 GDCHGNI--YFIENLNRYVFPMYHPSALTYNRSEEFHKIYENDWVKLREDLDKI 198


>gi|15893511|ref|NP_346860.1| uracyl DNA glycosilase [Clostridium acetobutylicum ATCC 824]
 gi|15023052|gb|AAK78200.1|AE007535_2 Uracyl DNA glycosilase [Clostridium acetobutylicum ATCC 824]
 gi|325507629|gb|ADZ19265.1| Uracyl DNA glycosilase [Clostridium acetobutylicum EA 2018]
          Length = 199

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/201 (22%), Positives = 74/201 (36%), Gaps = 20/201 (9%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLS-TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
            +L  LK+ + +  + +    +    I        D+M +G  P  S+  SGKPF G  G
Sbjct: 2   NNLQFLKNKIETIAN-NYKEEATGGFITGDGPIPCDIMFVGEAPGKSEVESGKPFVGVAG 60

Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPG------------NRNLSNIEMEICRPIIMRQ 181
              +K L SI + R+ + I+    + P              NR     E+ + R I+  +
Sbjct: 61  KNFEKYLNSIGVERSNVRITNTCFFRPIKIKTSKNGKTTISNRPPKTSEINLFREILDEE 120

Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241
           I ++ PKI++ +GN       N  A          + + +           HP  L    
Sbjct: 121 ISIVKPKIIITLGNVPLKRLTNFKAIGECHG----TPVHSDDFSCTIFPMYHPSSLTYNQ 176

Query: 242 --LIKKNTWHALITLKKALKN 260
               +K      I LK  LK 
Sbjct: 177 NDEFRKMYEEDWIKLKSVLKK 197


>gi|331270667|ref|YP_004397159.1| Uracil DNA glycosylase superfamily protein [Clostridium botulinum
           BKT015925]
 gi|329127217|gb|AEB77162.1| Uracil DNA glycosylase superfamily protein [Clostridium botulinum
           BKT015925]
          Length = 232

 Score =  100 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/174 (21%), Positives = 64/174 (36%), Gaps = 18/174 (10%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
                  D++ IG  P  ++   GKPF G  G   +  L+SI + R ++ I+    + P 
Sbjct: 63  GDGPIPCDVLFIGEAPGKNEVEQGKPFVGMAGETFNNYLKSIGLSRDKVRITNTCFFRPI 122

Query: 162 G------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209
                        NR     E+ + R I+  +I +++PKI++ +GN         + +  
Sbjct: 123 KKKVGKTGRTTISNRPPKVSEVNLFRDILDDEIAVVNPKIIITLGNVPLKRL--TEFKSI 180

Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIKKNTWHALITLKKALKNL 261
               G           I      HP  L   +    K       + LK+ LK +
Sbjct: 181 GDCHGNLYYNVILKRNI--FPMYHPSALTYNRNDKFKTMYEDDWLKLKEVLKTI 232


>gi|148378050|ref|YP_001252591.1| uracil-DNA glycosylase family protein [Clostridium botulinum A str.
           ATCC 3502]
 gi|153931907|ref|YP_001382450.1| uracil-DNA glycosylase family protein [Clostridium botulinum A str.
           ATCC 19397]
 gi|153937546|ref|YP_001386003.1| uracil-DNA glycosylase family protein [Clostridium botulinum A str.
           Hall]
 gi|148287534|emb|CAL81596.1| uracyl DNA glycosilase [Clostridium botulinum A str. ATCC 3502]
 gi|152927951|gb|ABS33451.1| uracil-DNA glycosylase family protein [Clostridium botulinum A str.
           ATCC 19397]
 gi|152933460|gb|ABS38959.1| uracil-DNA glycosylase family protein [Clostridium botulinum A str.
           Hall]
          Length = 198

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 73/195 (37%), Gaps = 18/195 (9%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
             LK+ +++  + ++   +   I        D++ IG  P  ++   GKPF G  G   +
Sbjct: 5   ESLKNKIKNISEEYVGDKTGGYITGDGPIPCDILFIGEAPGKNEVEEGKPFVGMAGKNFE 64

Query: 138 KMLQSIEIMRTQIHISMISPWHPPG------------NRNLSNIEMEICRPIIMRQIELI 185
           K L SI + R  I I+    + P              NR     E+ +   I+  +I L+
Sbjct: 65  KYLNSIGLKREFIRITNTCFFRPIKIKEGKNGRISISNRPPKVSEISLFSSILDEEINLV 124

Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK- 244
           +PK+++ +GN       +  +       G        +         HP  L      + 
Sbjct: 125 NPKLIITLGNVPLKRLTSFKS--IGDCHGNI--YFIENLNRYVFPMYHPSALTYNRSEEF 180

Query: 245 -KNTWHALITLKKAL 258
            K   +  + L++AL
Sbjct: 181 HKIYENDWVKLREAL 195


>gi|170760651|ref|YP_001785370.1| uracil-DNA glycosylase family protein [Clostridium botulinum A3
           str. Loch Maree]
 gi|169407640|gb|ACA56051.1| uracil-DNA glycosylase family protein [Clostridium botulinum A3
           str. Loch Maree]
          Length = 198

 Score = 99.4 bits (246), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 75/198 (37%), Gaps = 18/198 (9%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
             LK+ +++  + ++   +   I        D++ IG  P  ++   GKPF G  G   +
Sbjct: 5   ESLKNKIKNISEEYVGDKTGGYITGDGPIPCDILFIGEAPGKNEVEEGKPFVGMAGKNFE 64

Query: 138 KMLQSIEIMRTQIHISMISPWHPPG------------NRNLSNIEMEICRPIIMRQIELI 185
           K L SI++ R  I I+    + P              NR     E+ +   I+  +I L+
Sbjct: 65  KYLNSIDLKRESIRITNTCFFRPIKIKEGKNGRISISNRPPKVSEISLFSSILDEEINLV 124

Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK- 244
           +PK+++ +GN       +  +       G        +         HP  L      + 
Sbjct: 125 NPKLIITLGNVPLKRLTSFKS--IGDCHGNI--YFIENLNRYVFPMYHPSALTYNRSEEF 180

Query: 245 -KNTWHALITLKKALKNL 261
            K   +  + L+++L  +
Sbjct: 181 NKIYENDWVKLRESLDKI 198


>gi|260889477|ref|ZP_05900740.1| phage SPO1 DNA polymerase-related protein [Leptotrichia hofstadii
           F0254]
 gi|260860888|gb|EEX75388.1| phage SPO1 DNA polymerase-related protein [Leptotrichia hofstadii
           F0254]
          Length = 177

 Score = 99.4 bits (246), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 74/183 (40%), Gaps = 8/183 (4%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
            ++LK  +     C L  T ++ I     +  +++ +  + S+ +++  K    + G   
Sbjct: 2   WNDLKLEIDICTKCILEKTRINPIVGEGNKKAEILFVLDSISEEEDVKQKLLIDRNGKYF 61

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            K L+  ++   + + + ++     GN    +   + C   ++ QI LI+P+ ++ +G +
Sbjct: 62  KKFLEYSKLDLKKCYFTTLTKCSSHGNLIEKDSITK-CNEFLVAQIALINPRYIVTVGER 120

Query: 197 TKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
                  + + +     +GK  +    +  I  +       L +    +K  W  LI + 
Sbjct: 121 ATKSLLEDVEKEDIKDLVGKVFDF---YGEIKIVPIYDISYLFKATDKEK--WK-LIKIL 174

Query: 256 KAL 258
           + L
Sbjct: 175 EKL 177


>gi|169831683|ref|YP_001717665.1| phage SPO1 DNA polymerase-like protein [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169638527|gb|ACA60033.1| phage SPO1 DNA polymerase-related protein [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 237

 Score = 99.4 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 62/156 (39%), Gaps = 6/156 (3%)

Query: 88  HDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM 146
             C  L       +    +    L+I+G  P   ++  G PF G++G +L   L S+ + 
Sbjct: 43  RRCPELSPCR--PVPGQGSRRSRLVILGEAPGTDEDAIGHPFVGQSGLLLTAALNSLGVD 100

Query: 147 RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIEL-ISPKILLFIGNKTKNFFFNND 205
           R ++ I+ +    PP NR   + E E CR ++  ++    S  ++L +GN    F     
Sbjct: 101 RNRVFITNVVRCRPPNNREPHSAEQEACRQLLKDELTGLPSGVVVLTLGNVPLRFMRGTS 160

Query: 206 AQKTYQNLGKWSN--LCTPHSIIPTLATVHPQELIQ 239
                   G W          +   + T HP  +++
Sbjct: 161 GPGVTACRGVWLESFRWQRSLVAAVIPTYHPAFVLR 196


>gi|170692666|ref|ZP_02883828.1| Uracil-DNA glycosylase superfamily [Burkholderia graminis C4D1M]
 gi|170142322|gb|EDT10488.1| Uracil-DNA glycosylase superfamily [Burkholderia graminis C4D1M]
          Length = 603

 Score = 98.7 bits (244), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 37/301 (12%), Positives = 85/301 (28%), Gaps = 67/301 (22%)

Query: 2   TSKRILSQEQILTI-ALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60
            S   ++ E    +   +Y ++        P        +        A + I       
Sbjct: 277 MSGEAVTSESTEALWLGYYEEAVSGETPPVPLRYWRAPPEGPPLPAQLARERICRRGQNA 336

Query: 61  SPLVQQADSIAQKACS--LHELKSLLRSFHDCHLCSTSLSTIC----------------- 101
              V  A      A +  L E    L +   C L   +   +                  
Sbjct: 337 VVTVPAAPPAGYSALTPPLREPTGPLDTCRRCALWRNAKQPVLGAGAGAGAGAGAGAGAG 396

Query: 102 -----------------------------------ATQTEGQDLMIIGYTPSDSDNISGK 126
                                               +      +M++G  P + +N  G 
Sbjct: 397 AGAGAGAGAGAGAGAGAAAGAAAGGCVSANANAHAGSTPASPPIMVVGEQPGEYENQHGV 456

Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPW-------HPPGNRNLSNIEMEICRPIIM 179
           PF+G  G +LD +L    + R  ++++                +R  +  E+E C+  + 
Sbjct: 457 PFTGPAGQLLDSVLARAGLERAALYLTYAVKHYKWEIVGRERIHRTPAQREVEACQYWLD 516

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
           +++  ++P++++ +G              +     +++     H     + T HP   ++
Sbjct: 517 KELAQLAPRVVVALGPTALRALTGAHVNLS-----EYAGRTISHGGRIIVPTWHPAYALR 571

Query: 240 Y 240
            
Sbjct: 572 T 572


>gi|153956394|ref|YP_001397159.1| Uracil DNA glycosylase-related protein [Clostridium kluyveri DSM
           555]
 gi|219856707|ref|YP_002473829.1| hypothetical protein CKR_3364 [Clostridium kluyveri NBRC 12016]
 gi|146349252|gb|EDK35788.1| Uracil DNA glycosylase-related protein [Clostridium kluyveri DSM
           555]
 gi|219570431|dbj|BAH08415.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 198

 Score = 98.7 bits (244), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 73/200 (36%), Gaps = 22/200 (11%)

Query: 78  HELKSLLRSFHDCHLCSTS--LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
            +++  +R    C     +     I  +      ++ IG  P  ++ I GKPF G  G  
Sbjct: 5   EKIREKIREI--CENYKDAPTEGYISGSGPIPCLILFIGEAPGKTEIIQGKPFVGMAGKT 62

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI------------EMEICRPIIMRQIE 183
            +  L SI + R ++ I+    + P   +   +             E+++ + I+  +I 
Sbjct: 63  FENYLNSIGLKREEVRITNTCFFRPIKIKISKDGKETISNRTPKIPEIKLFKEILNEEIN 122

Query: 184 LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI--QYP 241
           L++PKI++ +GN     F   +     +  G        +   P     HP  L   +  
Sbjct: 123 LVNPKIIITLGNIPLKSF--TEFDSIGKCHGTI--YFNENLRKPVFPMYHPSALTYNRNK 178

Query: 242 LIKKNTWHALITLKKALKNL 261
             +         LK AL  L
Sbjct: 179 NFQSIYEEDWEKLKGALNTL 198


>gi|257415229|ref|ZP_05592223.1| uracil-DNA glycosylase superfamily [Enterococcus faecalis AR01/DG]
 gi|257157057|gb|EEU87017.1| uracil-DNA glycosylase superfamily [Enterococcus faecalis ARO1/DG]
          Length = 216

 Score = 98.3 bits (243), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 69/214 (32%), Gaps = 35/214 (16%)

Query: 78  HELKSLL-RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             LK  +     D  L       +     +   +M+IG  P   +     PF G++G +L
Sbjct: 5   EHLKQAVLAKAKDLPL----EGFVEGQGPQQPKVMLIGEAPGKEEIKENVPFIGRSGQLL 60

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPG-----------------NRNLSNIEMEICRPIIM 179
            + LQ + + R  ++I+      P                   NR  +  E++I  P++ 
Sbjct: 61  MEQLQQVGLNRETVYITSAVRSRPFSVKTKQIAKTGERVTKFPNRTPTKEEIKIFAPLLD 120

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS------------NLCTPHSIIP 227
            +I +  P+++L +GN                  G               N         
Sbjct: 121 WEIAVCQPELILTLGNIGLQRLLGPK-PTITAVHGTVIQSPIQTFDEQSQNYHWTQKTYQ 179

Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
            +   HP  +     +K+        ++K L+ L
Sbjct: 180 IIPLFHPAAVFYNYRLKEVVKEDWQVVQKQLQLL 213


>gi|256959791|ref|ZP_05563962.1| uracil-DNA glycosylase [Enterococcus faecalis Merz96]
 gi|293384979|ref|ZP_06630813.1| putative phage SPO1 DNA polymerase-related protein [Enterococcus
           faecalis R712]
 gi|293389249|ref|ZP_06633711.1| putative phage SPO1 DNA polymerase-related protein [Enterococcus
           faecalis S613]
 gi|312905968|ref|ZP_07764981.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis DAPTO 512]
 gi|312909314|ref|ZP_07768170.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis DAPTO 516]
 gi|256950287|gb|EEU66919.1| uracil-DNA glycosylase [Enterococcus faecalis Merz96]
 gi|291077657|gb|EFE15021.1| putative phage SPO1 DNA polymerase-related protein [Enterococcus
           faecalis R712]
 gi|291081413|gb|EFE18376.1| putative phage SPO1 DNA polymerase-related protein [Enterococcus
           faecalis S613]
 gi|310627963|gb|EFQ11246.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis DAPTO 512]
 gi|311290338|gb|EFQ68894.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis DAPTO 516]
          Length = 216

 Score = 98.3 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 69/214 (32%), Gaps = 35/214 (16%)

Query: 78  HELKSLL-RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             LK  +     D  L       +     +   LM+IG  P   +     PF G++G +L
Sbjct: 5   EHLKQAVLAKAKDLPL----EGFVEGQGPQQPKLMLIGEAPGKEEIKENVPFIGRSGQLL 60

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPG-----------------NRNLSNIEMEICRPIIM 179
            + LQ + + R  ++I+      P                   NR  +  E++I  P++ 
Sbjct: 61  MEQLQQVGLSRETVYITSAVRSRPFSVKTKQIAKTGERVTKFPNRTPTKEEIKIFAPLLD 120

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS------------NLCTPHSIIP 227
            +I +  P+++L +GN                  G               N         
Sbjct: 121 WEIAVCQPELILTLGNIGLQRLLGPK-PTITAVHGTVIQSPIQTFDEQSQNYHWTQKTYQ 179

Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
            +   HP  +     +K+        ++K L+ L
Sbjct: 180 IIPLFHPAAVFYNYRLKEVVKEDWQVVQKQLQLL 213


>gi|257080900|ref|ZP_05575261.1| uracil-DNA glycosylase superfamily [Enterococcus faecalis E1Sol]
 gi|256988930|gb|EEU76232.1| uracil-DNA glycosylase superfamily [Enterococcus faecalis E1Sol]
 gi|315146895|gb|EFT90911.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX4244]
          Length = 216

 Score = 98.3 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 69/214 (32%), Gaps = 35/214 (16%)

Query: 78  HELKSLL-RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             LK  +     D  L       +     +   +M+IG  P   +     PF G++G +L
Sbjct: 5   EHLKQAVLAKAKDLPL----EGFVEGQGPQQPKVMLIGEAPGKEEIKENVPFIGRSGQLL 60

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPG-----------------NRNLSNIEMEICRPIIM 179
            + LQ I + R  ++I+      P                   NR  +  E++I  P++ 
Sbjct: 61  MEQLQQIGLSRETVYITSAVRSRPFSVKTKQITKTGERVTKFPNRTPTKEEIKIFAPLLD 120

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS------------NLCTPHSIIP 227
            +I +  P+++L +GN                  G               N         
Sbjct: 121 WEIAVCQPELILTLGNIGLQRLLGPK-PTITAVHGTVIQSPIQTFDEQSQNYHWTQKTYQ 179

Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
            +   HP  +     +K+        ++K L+ L
Sbjct: 180 IIPLFHPAAVFYNYRLKEVVKEDWQVVQKQLQLL 213


>gi|89070851|ref|ZP_01158096.1| putative uracil-DNA glycosylase [Oceanicola granulosus HTCC2516]
 gi|89043589|gb|EAR49798.1| putative uracil-DNA glycosylase [Oceanicola granulosus HTCC2516]
          Length = 474

 Score = 98.3 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 70/197 (35%), Gaps = 19/197 (9%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           +  +L+    +  +          +         LM++G  P D ++  G+PF G  G M
Sbjct: 284 TFDDLRKRAEA-ENRETQPGYGRIVLGEGPADARLMVVGEQPGDVEDREGRPFVGPAGQM 342

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISPK 188
            D +     + R   +++                +++ ++ ++E  R  I ++++L+ PK
Sbjct: 343 FDTVAAEAGLERGAAYVTNAVKRFKFTLRGKRRIHQSPTSGDIEHARWWIAQELDLVQPK 402

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL------ 242
           ++L +G         +      +  G            P   TVHP  L++ P       
Sbjct: 403 LILAMGGTAAETLTGSRK-GILKRRGAVEETEYG----PVFLTVHPSYLLRLPDAAAKAA 457

Query: 243 IKKNTWHALITLKKALK 259
                   L ++ K + 
Sbjct: 458 ETARFRDDLASVAKLVA 474


>gi|229546484|ref|ZP_04435209.1| uracil-DNA glycosylase [Enterococcus faecalis TX1322]
 gi|229548599|ref|ZP_04437324.1| uracil-DNA glycosylase [Enterococcus faecalis ATCC 29200]
 gi|256617541|ref|ZP_05474387.1| uracil-DNA glycosylase superfamily [Enterococcus faecalis ATCC
           4200]
 gi|256761430|ref|ZP_05502010.1| uracil-DNA glycosylase [Enterococcus faecalis T3]
 gi|256854482|ref|ZP_05559846.1| uracil-DNA glycosylase superfamily [Enterococcus faecalis T8]
 gi|257089087|ref|ZP_05583448.1| uracil-DNA glycosylase [Enterococcus faecalis CH188]
 gi|257418275|ref|ZP_05595269.1| uracil-DNA glycosylase [Enterococcus faecalis T11]
 gi|257420917|ref|ZP_05597907.1| uracil-DNA glycosylase [Enterococcus faecalis X98]
 gi|307289648|ref|ZP_07569592.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0109]
 gi|307289927|ref|ZP_07569856.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0411]
 gi|312904324|ref|ZP_07763486.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0635]
 gi|312953034|ref|ZP_07771887.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0102]
 gi|229306230|gb|EEN72226.1| uracil-DNA glycosylase [Enterococcus faecalis ATCC 29200]
 gi|229308384|gb|EEN74371.1| uracil-DNA glycosylase [Enterococcus faecalis TX1322]
 gi|256597068|gb|EEU16244.1| uracil-DNA glycosylase superfamily [Enterococcus faecalis ATCC
           4200]
 gi|256682681|gb|EEU22376.1| uracil-DNA glycosylase [Enterococcus faecalis T3]
 gi|256710042|gb|EEU25086.1| uracil-DNA glycosylase superfamily [Enterococcus faecalis T8]
 gi|256997899|gb|EEU84419.1| uracil-DNA glycosylase [Enterococcus faecalis CH188]
 gi|257160103|gb|EEU90063.1| uracil-DNA glycosylase [Enterococcus faecalis T11]
 gi|257162741|gb|EEU92701.1| uracil-DNA glycosylase [Enterococcus faecalis X98]
 gi|295114118|emb|CBL32755.1| Uracil-DNA glycosylase [Enterococcus sp. 7L76]
 gi|306498993|gb|EFM68482.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0411]
 gi|306499462|gb|EFM68835.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0109]
 gi|310629063|gb|EFQ12346.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0102]
 gi|310632420|gb|EFQ15703.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0635]
 gi|315030532|gb|EFT42464.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX4000]
 gi|315153897|gb|EFT97913.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0031]
 gi|315156695|gb|EFU00712.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0043]
 gi|315159726|gb|EFU03743.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0312]
 gi|315162698|gb|EFU06715.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0645]
 gi|315166181|gb|EFU10198.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX1302]
 gi|315170775|gb|EFU14792.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX1342]
 gi|315578765|gb|EFU90956.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0630]
 gi|323479839|gb|ADX79278.1| uracil DNA glycosylase superfamily protein [Enterococcus faecalis
           62]
          Length = 216

 Score = 98.3 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 69/214 (32%), Gaps = 35/214 (16%)

Query: 78  HELKSLL-RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             LK  +     D  L       +     +   +M+IG  P   +     PF G++G +L
Sbjct: 5   EHLKQAVLAKAKDLPL----EGFVEGQGPQQPKVMLIGEAPGKEEIKENVPFIGRSGQLL 60

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPG-----------------NRNLSNIEMEICRPIIM 179
            + LQ + + R  ++I+      P                   NR  +  E++I  P++ 
Sbjct: 61  MEQLQQVGLSRETVYITSAVRSRPFSVKTKQIAKTGERVTKFPNRTPTKEEIKIFAPLLD 120

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS------------NLCTPHSIIP 227
            +I +  P+++L +GN                  G               N         
Sbjct: 121 WEIAVCQPELILTLGNIGLQRLLGPK-PTITAVHGTVIQSPIQTFDEQSQNYHWTQKTYQ 179

Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
            +   HP  +     +K+        ++K L+ L
Sbjct: 180 IIPLFHPAAVFYNYRLKEVVKEDWQVVQKQLQLL 213


>gi|28209837|ref|NP_780781.1| DNA polymerase [Clostridium tetani E88]
 gi|28202272|gb|AAO34718.1| DNA polymerase, bacteriophage-type [Clostridium tetani E88]
          Length = 173

 Score = 98.3 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 64/173 (36%), Gaps = 17/173 (9%)

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160
             +     D++ IG  P  ++   GKPF G  G      L  I + R  I I+    + P
Sbjct: 1   MGSGPIPCDILFIGEAPGKTEVEEGKPFVGAAGKNFQYYLDMINLNRKDIRITNTCYFRP 60

Query: 161 PG------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQK 208
                         NR     E+ + + I+ ++IE ++PKI++ +GN     F +N    
Sbjct: 61  IKIKMSSSGRKTISNRPPKTSEINLFQHILKKEIETVNPKIIITLGNTPLKTF-DNYNAT 119

Query: 209 TYQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIKKNTWHALITLKKALK 259
                G    L +    +      HP  LI  +    K++       L   LK
Sbjct: 120 IGHRHGSL--LFSEKLNMHIFPMYHPSALIYNRTDSFKESYKEDWCKLADILK 170


>gi|315149397|gb|EFT93413.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0012]
          Length = 216

 Score = 98.3 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 69/214 (32%), Gaps = 35/214 (16%)

Query: 78  HELKSLL-RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             LK  +     D  L       +     +   +M+IG  P   +     PF G++G +L
Sbjct: 5   EHLKKAVLAKAKDLPL----EGFVEGQGPQQPKVMLIGEAPGKEEIKENVPFIGRSGQLL 60

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPG-----------------NRNLSNIEMEICRPIIM 179
            + LQ + + R  ++I+      P                   NR  +  E++I  P++ 
Sbjct: 61  MEQLQQVGLSRETVYITSAVRSRPFSVKTKQIAKTGERVTKFPNRTPTKEEIKIFAPLLD 120

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS------------NLCTPHSIIP 227
            +I +  P+++L +GN                  G               N         
Sbjct: 121 WEIAVCQPELILTLGNIGLQRLLGPK-PTITAVHGTVIQSTIQTFDEQSQNYHWTQKTYQ 179

Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
            +   HP  +     +K+        ++K L+ L
Sbjct: 180 IIPLFHPAAVFYNYRLKEVVKEDWQVVQKQLQLL 213


>gi|29375258|ref|NP_814411.1| phage SPO1 DNA polymerase-related protein, putative [Enterococcus
           faecalis V583]
 gi|227517621|ref|ZP_03947670.1| uracil-DNA glycosylase [Enterococcus faecalis TX0104]
 gi|227554773|ref|ZP_03984820.1| uracil-DNA glycosylase [Enterococcus faecalis HH22]
 gi|255971119|ref|ZP_05421705.1| uracil-DNA glycosylase [Enterococcus faecalis T1]
 gi|255973731|ref|ZP_05424317.1| uracil-DNA glycosylase [Enterococcus faecalis T2]
 gi|256957477|ref|ZP_05561648.1| uracil-DNA glycosylase superfamily [Enterococcus faecalis DS5]
 gi|256964557|ref|ZP_05568728.1| uracil-DNA glycosylase [Enterococcus faecalis HIP11704]
 gi|257077533|ref|ZP_05571894.1| uracil-DNA glycosylase [Enterococcus faecalis JH1]
 gi|294780443|ref|ZP_06745808.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis PC1.1]
 gi|300861844|ref|ZP_07107924.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TUSoD Ef11]
 gi|307268181|ref|ZP_07549566.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX4248]
 gi|307272471|ref|ZP_07553724.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0855]
 gi|307278251|ref|ZP_07559330.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0860]
 gi|312900247|ref|ZP_07759559.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0470]
 gi|29342717|gb|AAO80482.1| phage SPO1 DNA polymerase-related protein, putative [Enterococcus
           faecalis V583]
 gi|227074927|gb|EEI12890.1| uracil-DNA glycosylase [Enterococcus faecalis TX0104]
 gi|227176072|gb|EEI57044.1| uracil-DNA glycosylase [Enterococcus faecalis HH22]
 gi|255962137|gb|EET94613.1| uracil-DNA glycosylase [Enterococcus faecalis T1]
 gi|255966603|gb|EET97225.1| uracil-DNA glycosylase [Enterococcus faecalis T2]
 gi|256947973|gb|EEU64605.1| uracil-DNA glycosylase superfamily [Enterococcus faecalis DS5]
 gi|256955053|gb|EEU71685.1| uracil-DNA glycosylase [Enterococcus faecalis HIP11704]
 gi|256985563|gb|EEU72865.1| uracil-DNA glycosylase [Enterococcus faecalis JH1]
 gi|294452442|gb|EFG20879.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis PC1.1]
 gi|300848369|gb|EFK76126.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TUSoD Ef11]
 gi|306505002|gb|EFM74193.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0860]
 gi|306510756|gb|EFM79773.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0855]
 gi|306515450|gb|EFM83980.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX4248]
 gi|311292608|gb|EFQ71164.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0470]
 gi|315034413|gb|EFT46345.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0027]
 gi|315144550|gb|EFT88566.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX2141]
 gi|315166886|gb|EFU10903.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX1341]
 gi|315173943|gb|EFU17960.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX1346]
 gi|315575395|gb|EFU87586.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0309B]
 gi|315581453|gb|EFU93644.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0309A]
 gi|327534243|gb|AEA93077.1| uracil-DNA glycosylase [Enterococcus faecalis OG1RF]
 gi|329576929|gb|EGG58412.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX1467]
          Length = 216

 Score = 98.3 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 69/214 (32%), Gaps = 35/214 (16%)

Query: 78  HELKSLL-RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             LK  +     D  L       +     +   +M+IG  P   +     PF G++G +L
Sbjct: 5   EHLKKAVLAKAKDLPL----EGFVEGQGPQQPKVMLIGEAPGKEEIKENVPFIGRSGQLL 60

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPG-----------------NRNLSNIEMEICRPIIM 179
            + LQ + + R  ++I+      P                   NR  +  E++I  P++ 
Sbjct: 61  MEQLQQVGLSRETVYITSAVRSRPFSVKTKQIAKTGERVTKFPNRTPTKEEIKIFAPLLD 120

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS------------NLCTPHSIIP 227
            +I +  P+++L +GN                  G               N         
Sbjct: 121 WEIAVCQPELILTLGNIGLQRLLGPK-PTITAVHGTVIQSPIQTFDEQSQNYHWTQKTYQ 179

Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
            +   HP  +     +K+        ++K L+ L
Sbjct: 180 IIPLFHPAAVFYNYRLKEVVKEDWQVVQKQLQLL 213


>gi|315031358|gb|EFT43290.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX0017]
          Length = 216

 Score = 97.5 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 70/214 (32%), Gaps = 35/214 (16%)

Query: 78  HELKSLL-RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             LK  +     D  L       +    ++   +M+IG  P   +     PF G++G +L
Sbjct: 5   EHLKQAVLAKAKDLPL----EGFVEGQGSQQPKVMLIGEAPGKEEIKENVPFIGRSGQLL 60

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPG-----------------NRNLSNIEMEICRPIIM 179
            + LQ + + R  ++I+      P                   NR  +  E++I  P++ 
Sbjct: 61  MEQLQQVGLSRETVYITSAVRSRPFSVKTKQIAKTGERVTKFPNRTPTKEEIKIFAPLLD 120

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS------------NLCTPHSIIP 227
            +I +  P+++L +GN                  G               N         
Sbjct: 121 WEIAVCQPELILTLGNIGLQRLLGPK-PTITAVHGTVIQSPIQTFDEQSQNYHWTQKTYQ 179

Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
            +   HP  +     +K+        ++K L+ L
Sbjct: 180 IIPLFHPAAVFYNYRLKEVVKEDWQVVQKQLQLL 213


>gi|257086014|ref|ZP_05580375.1| uracil-DNA glycosylase superfamily [Enterococcus faecalis D6]
 gi|256994044|gb|EEU81346.1| uracil-DNA glycosylase superfamily [Enterococcus faecalis D6]
 gi|315025659|gb|EFT37591.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX2137]
          Length = 216

 Score = 97.5 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 70/214 (32%), Gaps = 35/214 (16%)

Query: 78  HELKSLL-RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             LK  +     D  L       +    ++   +M+IG  P   +     PF G++G +L
Sbjct: 5   EHLKKAVLAKAKDLPL----EGFVEGQGSQQPKVMLIGEAPGKEEIKENVPFIGRSGQLL 60

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPG-----------------NRNLSNIEMEICRPIIM 179
            + LQ + + R  ++I+      P                   NR  +  E++I  P++ 
Sbjct: 61  MEQLQQVGLSRETVYITSAVRSRPFSVKTKQIAKTGERVTKFPNRTPTKEEIKIFAPLLD 120

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS------------NLCTPHSIIP 227
            +I +  P+++L +GN                  G               N         
Sbjct: 121 WEIAVCQPELILTLGNIGLQRLLGPK-PTITAVHGTVIQSPIQTFDEQSQNYHWTQKTYQ 179

Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
            +   HP  +     +K+        ++K L+ L
Sbjct: 180 IIPLFHPAAVFYNYRLKEVVKEDWQVVQKQLQLL 213


>gi|307277057|ref|ZP_07558162.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX2134]
 gi|306506228|gb|EFM75393.1| uracil-DNA glycosylase, family 4 [Enterococcus faecalis TX2134]
          Length = 216

 Score = 97.5 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 68/212 (32%), Gaps = 35/212 (16%)

Query: 78  HELKSLL-RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             LK  +     D  L       +     +   +M+IG  P   +     PF G++G +L
Sbjct: 5   EHLKQAVLAKAKDLPL----EGFVEGQGPQQPKVMLIGEAPGKEEIKENVPFIGRSGQLL 60

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPG-----------------NRNLSNIEMEICRPIIM 179
            + LQ + + R  ++I+      P                   NR  +  E++I  P++ 
Sbjct: 61  MEQLQQVGLSRETVYITSAVRSRPFSVKTKQIAKTGERVTKFPNRTPTKEEIKIFAPLLD 120

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS------------NLCTPHSIIP 227
            +I +  P+++L +GN                  G               N         
Sbjct: 121 WEIAVCQPELILTLGNIGLQRLLGPK-PTITAVHGTVIQSPIQTFDEQSQNYHWTQKTYQ 179

Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALK 259
            +   HP  +     +K+        ++K L+
Sbjct: 180 IIPLFHPAAVFYNYRLKEVVKEDWQVVQKQLQ 211


>gi|94497580|ref|ZP_01304149.1| hypothetical protein SKA58_08694 [Sphingomonas sp. SKA58]
 gi|94422997|gb|EAT08029.1| hypothetical protein SKA58_08694 [Sphingomonas sp. SKA58]
          Length = 246

 Score = 97.5 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 93/261 (35%), Gaps = 24/261 (9%)

Query: 1   MTSKRILSQEQ----ILTIALFYADSGVY-WVFDEPNNEATYESQRKEKSIDSAIQPITN 55
           MT+ R + Q+           ++  +GV   V + P N               A+ P++ 
Sbjct: 1   MTAMRGIIQDDGQIAAQAYLTWWQSAGVDSAVAEAPINWL-----------RPAVAPVSG 49

Query: 56  IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115
                   V       +     H L+         H        I    +    LMI+  
Sbjct: 50  HSASRPTSVVTNQKPKELESFQHWLQDDSAHPE--HRWPGR--AILPAGSVDAPLMIVTD 105

Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICR 175
            P  +D  +G   + + G + D ML++I + R  ++++ +    PPG    +        
Sbjct: 106 MPDPADLDAGTLLADRAGGLCDAMLRAIALDRADVYVASLFFRRPPGGMVEAADLAAAAD 165

Query: 176 PIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
             +   + L  P+ LL +G++T         +    +     N      I+P +AT HP+
Sbjct: 166 R-MRTHVHLARPRRLLLLGDRTVRALMPVSGEVQPDS---LRNFNHDGGIVPAVATFHPR 221

Query: 236 ELIQYPLIKKNTWHALITLKK 256
            L+  P  K   W AL +L +
Sbjct: 222 LLLSQPAAKAECWRALQSLIE 242


>gi|257083589|ref|ZP_05577950.1| uracil-DNA glycosylase [Enterococcus faecalis Fly1]
 gi|256991619|gb|EEU78921.1| uracil-DNA glycosylase [Enterococcus faecalis Fly1]
          Length = 216

 Score = 97.5 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 68/214 (31%), Gaps = 35/214 (16%)

Query: 78  HELKSLL-RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             LK  +     D  L       +     +   +M+IG  P   +     PF G++G +L
Sbjct: 5   EHLKKAVLAKAKDLPL----EGFVEGQGPQQPKVMLIGEAPGKEEIKENVPFIGRSGQLL 60

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPG-----------------NRNLSNIEMEICRPIIM 179
            + LQ + + R  ++I+      P                   NR  +  E++I  P++ 
Sbjct: 61  MEQLQQVGLSRETVYITSAVRSRPFSVKTKQIAKTGERVTKFPNRTPTKEEIKIFAPLLD 120

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN------------LCTPHSIIP 227
            +I +  P+++L +GN                  G                         
Sbjct: 121 WEIAVCQPELILTLGNIGLQRLLGPK-PTITAVHGTVIQSPIQTFDEQSQSYHWTQKTYQ 179

Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
            +   HP  +     +K+        ++K L+ L
Sbjct: 180 IIPLFHPAAVFYNYRLKEVVKEDWQVVQKQLQLL 213


>gi|269121242|ref|YP_003309419.1| uracil-DNA glycosylase-like protein [Sebaldella termitidis ATCC
           33386]
 gi|268615120|gb|ACZ09488.1| Uracil-DNA glycosylase-like protein [Sebaldella termitidis ATCC
           33386]
          Length = 184

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 67/185 (36%), Gaps = 7/185 (3%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             EL+  +   H C L     + I     +   +M +    S+ ++  G     K G   
Sbjct: 4   WDELEMEINICHKCPLEKVRSNPILGKGDKTSKVMFVLDQISEQEDNRGILLIDKKGEYF 63

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            K L+  +    +++++ +      G        ++ C   ++ QI L++PKI++ +G  
Sbjct: 64  LKFLEFSKFDTDKVYMTNLFKCTAKGELAE-KRIIKACEEYLLTQIALVNPKIIVTVGEL 122

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
               F   D       +GK          I  L       L +    +K  W  L+ + +
Sbjct: 123 VTRQFIKEDFNDMRDIVGKEFPYA---GGIRILPVYDLMYLFKATDKEK--WQ-LVKILE 176

Query: 257 ALKNL 261
            L N+
Sbjct: 177 KLNNI 181


>gi|261410020|ref|YP_003246261.1| uracil-DNA glycosylase superfamily protein [Paenibacillus sp.
           Y412MC10]
 gi|261286483|gb|ACX68454.1| uracil-DNA glycosylase superfamily [Paenibacillus sp. Y412MC10]
          Length = 182

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 55/181 (30%), Gaps = 9/181 (4%)

Query: 84  LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK---PFSGKTGNMLDKML 140
           ++    C LC      I         LM+I   P   ++   +   PF   T   L   +
Sbjct: 1   MKHCERCELCKQRNRFIWGEGNPQGSLMMILDNPGAREDREDREGNPFLYGTRETLQLGM 60

Query: 141 QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF 200
           +   +    ++++ +     P            C P +  Q+    P +L   GN     
Sbjct: 61  REAGMDIHSVYVAYLLK-RRPTRAYDKPATRAACLPHLQSQLLQKQPLLLFGFGNVVVEG 119

Query: 201 FF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
            F   +     +  G W         IP   T HP  + +   + +     L  L+   +
Sbjct: 120 LFPQKENATVKELRGSWHEFE----GIPIGFTYHPLAVRRRLNLLRFFVEDLKGLRAKWE 175

Query: 260 N 260
            
Sbjct: 176 E 176


>gi|307069568|ref|YP_003878045.1| putative uracil-DNA glycosylase, family 4 [Candidatus Zinderia
           insecticola CARI]
 gi|306482828|gb|ADM89699.1| putative uracil-DNA glycosylase, family 4 [Candidatus Zinderia
           insecticola CARI]
          Length = 214

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 74/166 (44%), Gaps = 7/166 (4%)

Query: 80  LKSLLRSFHDCHLCSTSLSTICATQTEGQ-DLMIIGYTPSDSDNISGKPFSGKTGNMLDK 138
           L + + +   C L    +  +   +   +     IG  P   +++ G PF GK+G +L+ 
Sbjct: 31  LYNKINNCKKCILHKNKIRNVLGNKNIKKIKYFFIGEGPGKMEDLKGYPFIGKSGKLLNY 90

Query: 139 MLQSIEIMRTQIHISMISPWHPPGNRN----LSNIEMEICRPIIMRQIELISPKILLFIG 194
           ++  ++  + +I+I+ +        +N     +  E+  C   + ++I++I PKI++ +G
Sbjct: 91  LINKLKYKKKEIYITNVIKCISKNIKNKNIFPNKKEILKCLFYLKKEIKIIKPKIIITLG 150

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
               +  FN +  K      K  N    +  IP ++  HP  L++ 
Sbjct: 151 KIAFSSIFNINKNKFTIKKNK--NKIYYYYNIPLISIYHPSYLLRN 194


>gi|227530158|ref|ZP_03960207.1| uracil-DNA glycosylase [Lactobacillus vaginalis ATCC 49540]
 gi|227349911|gb|EEJ40202.1| uracil-DNA glycosylase [Lactobacillus vaginalis ATCC 49540]
          Length = 216

 Score = 96.4 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 64/189 (33%), Gaps = 30/189 (15%)

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160
                   DLM++G  P   + +   PFSG +G  L KML +I   R  ++I+ +    P
Sbjct: 27  PGQGKLKPDLMLVGEAPGRHEEVHNIPFSGASGKELMKMLATIGYDRDSVYITSVVRQRP 86

Query: 161 PG-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
                              NR  +  E+     +   ++  + PKI++ +GN        
Sbjct: 87  YSIKEVVDKKTGAKVTKKPNRTPTKKEVLAFANLFDWELAQVQPKIIVPLGNTALQRLLG 146

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIP------------TLATVHPQELIQYPLIKKNTWHAL 251
             A    +  G+  +    H+                +   HP  ++    ++       
Sbjct: 147 PQA-NIGKLHGRLLDQPIQHAKKDGSGYELATTNSLLVPMYHPAAVLYSRKLEPTILRDW 205

Query: 252 ITLKKALKN 260
             L + ++N
Sbjct: 206 QRLGEFIQN 214


>gi|238027270|ref|YP_002911501.1| phage SPO1 DNA polymerase-like protein [Burkholderia glumae BGR1]
 gi|237876464|gb|ACR28797.1| Phage SPO1 DNA polymerase-related protein [Burkholderia glumae
           BGR1]
          Length = 218

 Score = 96.4 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 75/181 (41%), Gaps = 13/181 (7%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            +L + L +   C L +++   +         +M++G  P   D+ SG+PFSG  G +LD
Sbjct: 11  PDLPATLDACRRCELWASASRPVAGAGPRRAAIMLVGEQPDAQDDRSGQPFSGTAGRLLD 70

Query: 138 KMLQSIEIMRTQIHISMISPW-------HPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
           + L    + R++ + +             P  +   +  E++ CR  + R+I  ++P+++
Sbjct: 71  RALTEASLARSETYATYALKHLRRDAAGRPRADEAPAGHELDACRYWLEREIRSVAPRVI 130

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI--KKNTW 248
           +  G        ++     ++          P      +AT+ P ++++      ++  W
Sbjct: 131 VAFGTAALRAVLDDPQAAVHRM---PLPYRLPGGE-RVIATLAPAQVLRTRGADSRERAW 186

Query: 249 H 249
            
Sbjct: 187 Q 187


>gi|148544738|ref|YP_001272108.1| uracil-DNA glycosylase superfamily protein [Lactobacillus reuteri
           DSM 20016]
 gi|184154090|ref|YP_001842431.1| putative uracil-DNA glycosylase [Lactobacillus reuteri JCM 1112]
 gi|227363863|ref|ZP_03847968.1| uracil-DNA glycosylase [Lactobacillus reuteri MM2-3]
 gi|325683073|ref|ZP_08162589.1| uracil-DNA glycosylase [Lactobacillus reuteri MM4-1A]
 gi|148531772|gb|ABQ83771.1| Uracil-DNA glycosylase superfamily [Lactobacillus reuteri DSM
           20016]
 gi|183225434|dbj|BAG25951.1| putative uracil-DNA glycosylase [Lactobacillus reuteri JCM 1112]
 gi|227071090|gb|EEI09408.1| uracil-DNA glycosylase [Lactobacillus reuteri MM2-3]
 gi|324977423|gb|EGC14374.1| uracil-DNA glycosylase [Lactobacillus reuteri MM4-1A]
          Length = 217

 Score = 96.4 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 63/194 (32%), Gaps = 30/194 (15%)

Query: 97  LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156
                       DLM++G  P   +     PFSG +G  L K+++SI   R+ ++I+ + 
Sbjct: 23  TGFTPGQGPLNPDLMLVGEAPGRHEEKVNIPFSGASGQELMKLIESIGYSRSTVYITSVV 82

Query: 157 PWHPPGNRN-----------------LSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199
              P   +                   +  E+    P+   ++  + PKI++ +GN    
Sbjct: 83  RQRPYSIKKVVDKKTGEVIEKKPNRTPTKKEVLAFAPLFDWELAQVKPKIIVTLGNTALQ 142

Query: 200 FFFNNDAQKTYQNLGKWS------------NLCTPHSIIPTLATVHPQELIQYPLIKKNT 247
               + A    +  G+                         +   HP  ++    ++   
Sbjct: 143 RLLGSQA-NISKLHGQLLHEKIQRTNDAHDGYELTADKHWIMPMYHPAAVLYARRLEPTI 201

Query: 248 WHALITLKKALKNL 261
                 L + +K +
Sbjct: 202 KADWQQLGQDIKKM 215


>gi|284163459|ref|YP_003401738.1| phage SPO1 DNA polymerase-related protein [Haloterrigena turkmenica
           DSM 5511]
 gi|284013114|gb|ADB59065.1| phage SPO1 DNA polymerase-related protein [Haloterrigena turkmenica
           DSM 5511]
          Length = 213

 Score = 95.6 bits (236), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 63/182 (34%), Gaps = 24/182 (13%)

Query: 98  STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP 157
             +        D+M++G  P   +   G+PF G+ G  LD+ L+SI   R +++I+ +  
Sbjct: 31  RFVPGVGPLSADVMLVGEAPGGQEVEQGEPFVGQAGQQLDRALESIGHDRRELYITNLVK 90

Query: 158 WHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS 217
             PP NR+    E+E   P++  ++E + P +++ +G+         D +      G+  
Sbjct: 91  VRPPENRDPHVDEIEAWWPVLEAELERVDPVVVVPMGSFATAELLETD-ETITDLHGEEF 149

Query: 218 NLC-----------------------TPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
                                        +      + HP   +            L   
Sbjct: 150 EREVPPASHASNEEGTGSSSEGGADPGERTERIVRPSFHPAAALYDRSKVDAIESDLRAA 209

Query: 255 KK 256
            +
Sbjct: 210 LE 211


>gi|58580293|ref|YP_199309.1| DNA polymerase related protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|58424887|gb|AAW73924.1| DNA polymerase related protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 368

 Score = 95.2 bits (235), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 56/156 (35%), Gaps = 21/156 (13%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60
           M  K   +  +  ++     ++GV         E   E  R       A QP T      
Sbjct: 225 MPQKYWKNLPEAASLPELIREAGVRV---REMAERAPEPVRPRVPAAPAPQPDTTTH--- 278

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120
                          SL +L+S  R    C L   +  T+     +   +M+IG  P D 
Sbjct: 279 ---------------SLAQLRSAARDCRRCELWQPATQTVFGEGPDDASVMVIGEQPGDE 323

Query: 121 DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156
           +++SG+PF G  G +    L  + + R + +++   
Sbjct: 324 EDLSGRPFVGPAGRLFTMALGELGVDRQRFYVTNAV 359


>gi|194466997|ref|ZP_03072984.1| Uracil-DNA glycosylase superfamily [Lactobacillus reuteri 100-23]
 gi|194454033|gb|EDX42930.1| Uracil-DNA glycosylase superfamily [Lactobacillus reuteri 100-23]
          Length = 217

 Score = 95.2 bits (235), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 63/194 (32%), Gaps = 30/194 (15%)

Query: 97  LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156
                       DLM++G  P   +     PFSG +G  L K+++SI   R+ ++I+ + 
Sbjct: 23  TGFTPGQGQLNPDLMLVGEAPGRHEEEVNIPFSGASGQELMKLIESIGYSRSTVYITSVV 82

Query: 157 PWHPPGNRN-----------------LSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199
              P   +                   +  E+    P+   ++  + PKI++ +GN    
Sbjct: 83  RQRPYSIKKVVDKKTGEVIEKKPNRTPTKKEVLAFAPLFDWELAQVKPKIIVTLGNTALQ 142

Query: 200 FFFNNDAQKTYQNLGKWS------------NLCTPHSIIPTLATVHPQELIQYPLIKKNT 247
               + A    +  G+                         +   HP  ++    ++   
Sbjct: 143 RLLGSQA-NIGKLHGQLLHEKIQRTNDAHDGYELTTDKHWIMPMYHPAAVLYARRLEPTI 201

Query: 248 WHALITLKKALKNL 261
                 L + +K +
Sbjct: 202 KADWQQLGQDIKKM 215


>gi|91777900|ref|YP_553108.1| hypothetical protein Bxe_B2228 [Burkholderia xenovorans LB400]
 gi|91690560|gb|ABE33758.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
          Length = 507

 Score = 94.8 bits (234), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 74/215 (34%), Gaps = 21/215 (9%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P   A    +R      S    +  +  I    V            L E    L +   C
Sbjct: 280 PPLPAHLARERSRLGAQSGTVTVPEMPPIEYSAVTPP---------LREPTGPLATCRRC 330

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150
            L   +   +         +M++G  P + +N +G PF+G  G++LD +L    + R  +
Sbjct: 331 ALWRNAKQAVAGAGAAQAAIMVVGEQPGEDENQNGAPFTGPAGHLLDTVLARAGLERAAL 390

Query: 151 HISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
           +++     +          +R  +  E+E C+  +  ++  + P++++ +G         
Sbjct: 391 YLTYAVKHYKWETIEQQRVHRTPALREVEACQYWLEHELARVVPRVVVTLGATALKALTG 450

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238
                +     ++      H     + T HP   +
Sbjct: 451 AHVNLS-----EYLGQTICHGGRLIVPTWHPSYAL 480


>gi|325204828|gb|ADZ00282.1| putative uracil-DNA glycosylase, family 4 [Neisseria meningitidis
           M01-240355]
          Length = 247

 Score = 94.8 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 45/270 (16%), Positives = 89/270 (32%), Gaps = 37/270 (13%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDE----------PNNEATYESQRKEKSIDSAI 50
           M S R L   + L +   +   G   +             P  +      ++     +  
Sbjct: 1   MLSARYLHLHEALGLGPMWLKRGAVVLPSATLPESPTQIRPQKQTVLSIPQRPSEQHTGQ 60

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
             +  ++ + +  V       +    L  +   +               + A       L
Sbjct: 61  ARLETMKALETAAVPTRKPAPETETPLSGVSDGIA-------------PVPAASGI-TKL 106

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170
            ++   P   D + G+ F GK G +LD +L+++ +    +H +        GN   S   
Sbjct: 107 AVVSLCPPIEDAVYGQLFYGKAGVLLDNILKAVGLDAAYVHKTCWVKTAAVGNPMPSEAA 166

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230
           +E     +M++++      +LF+G      F   + Q   + L             P   
Sbjct: 167 IETATVSVMQELDGCRAPAVLFLG----QAFVQPERQTMIETL---------CGSRPFFI 213

Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALKN 260
             HP  L++ P +K   W  L  LK+AL+ 
Sbjct: 214 IDHPARLLRQPELKARAWQVLKQLKRALRQ 243


>gi|325139231|gb|EGC61777.1| putative uracil-DNA glycosylase, family 4 [Neisseria meningitidis
           ES14902]
          Length = 247

 Score = 94.8 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 46/270 (17%), Positives = 89/270 (32%), Gaps = 37/270 (13%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDE----------PNNEATYESQRKEKSIDSAI 50
           M S R L   + L +   +   G   +             P  +      ++     +  
Sbjct: 1   MLSARYLHLHEALGLGPMWLKRGAVVLPPATLPESPTQIRPQKQTVLSIPQRPSEQHTGQ 60

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
             +  ++ + +  V       +    L  L   +                 A+      L
Sbjct: 61  ARLKTMKVLETTAVHTRKPAPETETPLSGLSDGIAPVSA------------ASGIT--KL 106

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170
            ++   P   D + G+ F GK G +LD +L+++ +    +H +        GN   S   
Sbjct: 107 AVVSLCPPIEDAVYGQLFYGKAGVLLDNILKAVGLDAAYVHKTCWVKTAAVGNPMPSEAA 166

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230
           +E     +M++++      +LF+G      F   + Q   + L             P   
Sbjct: 167 IETATVSVMQELDGCRAPAVLFLG----QAFVQPERQTMIETL---------CGSRPFFI 213

Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALKN 260
             HP  L++ P +K   W  L  LK+AL+ 
Sbjct: 214 IDHPARLLRQPELKARAWQVLKQLKRALRQ 243


>gi|56964361|ref|YP_176092.1| uracil-DNA glycosylase [Bacillus clausii KSM-K16]
 gi|56910604|dbj|BAD65131.1| uracil-DNA glycosylase [Bacillus clausii KSM-K16]
          Length = 214

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 69/218 (31%), Gaps = 40/218 (18%)

Query: 74  ACSLHEL-KSLLRS--FHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130
           +  L EL K  +         L             E  D++ +G  P   +  + KPF+G
Sbjct: 3   SKQLQELGKKRIAPYPCEGFLL---------GGGNEEADVLFVGEAPGRDELQTHKPFTG 53

Query: 131 KTGNMLDKMLQSIEIMRTQIHISMISPWHPP--------------GNRNLSNIEMEICRP 176
           + G  L+  L+   I R  I+I+ +    P               GNR  +  E+    P
Sbjct: 54  RAGANLNGFLKEAGINREDIYITSVVRSRPYKHDVKSSKKPIEERGNRTPTQKEIIAHAP 113

Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS-------------NLCTPH 223
           ++   I  + PK+++ +G                   GK                L    
Sbjct: 114 LLDEMINQLDPKLIVTLGTIALKRLVGP-GLNLQDVHGKPFCTRLLQLPSLESSKLVRGE 172

Query: 224 SIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
                  T HP  +   P +     + +  L+  L +L
Sbjct: 173 RQQHVFPTFHPASVFYNPTLATAITNDMRQLRAVLDSL 210


>gi|329667096|gb|AEB93044.1| DNA polymerase [Lactobacillus johnsonii DPC 6026]
          Length = 212

 Score = 93.7 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 58/189 (30%), Gaps = 31/189 (16%)

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160
                    LMI+G  P   +  S  PF G +G  L K L SI + R  ++I+      P
Sbjct: 25  FGAGPVHPKLMIVGEAPGREEIKSLIPFHGASGKELMKSLASIGLKREDVYITSAVRSRP 84

Query: 161 PG-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
                              NR  +  E+    P +  +I  + PKI++ +G        +
Sbjct: 85  YSIKHTFSKKENKEVIKYPNRKPTKKEIMAHAPFLDYEINCVKPKIIVTVGTTALTRLLD 144

Query: 204 NDAQKTYQNLGKWSN-------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
            D  +     GK                          +   HP  +     + +     
Sbjct: 145 -DKYEISNVHGKIIENTPILELNDKKDGYIWSKEKYIVVPQYHPAAVFYNRKLTEIIAQD 203

Query: 251 LITLKKALK 259
            + +K  +K
Sbjct: 204 WLNVKLLIK 212


>gi|293572085|ref|ZP_06683096.1| DNA polymerase [Enterococcus faecium E980]
 gi|291607870|gb|EFF37181.1| DNA polymerase [Enterococcus faecium E980]
          Length = 213

 Score = 93.7 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 56/191 (29%), Gaps = 30/191 (15%)

Query: 99  TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158
            +         LM++G  P  ++  +  PFSG+ G  L + L S  + R  ++I+     
Sbjct: 23  FVAGQGPLHPKLMLVGEAPGKTEIDTHIPFSGQAGKELMQALSSTGLTREDVYITSAVRS 82

Query: 159 HPPGNRN-----------------LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
            P    +                  +  E+    PI+  ++  I PK++  +GN      
Sbjct: 83  RPYRVTHWINKRTQQTETVYPNRTPTRSEVFAHAPILDYELMEIQPKLIATLGNIGLQRL 142

Query: 202 FNNDAQKTYQNLGKWSN------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249
                    +N G+                         L   HP  +     +      
Sbjct: 143 LG-KEYTVTKNHGQLYTGPVLQLTKQKDAYEWSEKNYRILPLFHPAAIFYNRSLVPVIHQ 201

Query: 250 ALITLKKALKN 260
               L   L+ 
Sbjct: 202 DWQVLASLLQQ 212


>gi|262037920|ref|ZP_06011345.1| phage SPO1 DNA polymerase-related protein [Leptotrichia
           goodfellowii F0264]
 gi|261748063|gb|EEY35477.1| phage SPO1 DNA polymerase-related protein [Leptotrichia
           goodfellowii F0264]
          Length = 181

 Score = 93.7 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 70/180 (38%), Gaps = 7/180 (3%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
            ++L++ +     CHL     + +    +    ++ +  + S  +++     + K G   
Sbjct: 2   WNDLETEIGICTKCHLERIRTNPVTGKGSRKAKILFVLESVSKKEDLKNDLLADKKGEYF 61

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            K L+  +I  ++ + + ++     G    +   +  CR  +  QI L++P+ ++ +G  
Sbjct: 62  KKFLEYSKINLSECYFTTLTKCSSHGELIEN-ECIVKCRDYLTTQIALLNPEYIITVGEI 120

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
               F  +  ++    +GK          I  +       L++    +K  W  +  L++
Sbjct: 121 PTKNFIKSK-EEIRDMVGKIYGYT---GGIKIIPVYDLSYLLKAGDKEK--WQVVKILEE 174


>gi|227550428|ref|ZP_03980477.1| uracil-DNA glycosylase [Enterococcus faecium TX1330]
 gi|257888457|ref|ZP_05668110.1| uracil-DNA glycosylase [Enterococcus faecium 1,141,733]
 gi|257897168|ref|ZP_05676821.1| uracil-DNA glycosylase [Enterococcus faecium Com12]
 gi|293377810|ref|ZP_06623996.1| uracil-DNA glycosylase, family 4 [Enterococcus faecium PC4.1]
 gi|227180329|gb|EEI61301.1| uracil-DNA glycosylase [Enterococcus faecium TX1330]
 gi|257824511|gb|EEV51443.1| uracil-DNA glycosylase [Enterococcus faecium 1,141,733]
 gi|257833733|gb|EEV60154.1| uracil-DNA glycosylase [Enterococcus faecium Com12]
 gi|292643558|gb|EFF61682.1| uracil-DNA glycosylase, family 4 [Enterococcus faecium PC4.1]
          Length = 213

 Score = 93.7 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 56/191 (29%), Gaps = 30/191 (15%)

Query: 99  TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158
            +         LM++G  P  ++  +  PFSG+ G  L + L S  + R  ++I+     
Sbjct: 23  FVAGQGPLHPKLMLVGEAPGKTEIDTHIPFSGQAGKELMQALSSTGLTREDVYITSAVRS 82

Query: 159 HPPGNRN-----------------LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
            P    +                  +  E+    PI+  ++  + PK++  +GN      
Sbjct: 83  RPYRVTHRINKRTQQTETVYPNRTPTRSEVFAHAPILDYELMEVQPKLIATLGNIGLQRL 142

Query: 202 FNNDAQKTYQNLGKWSN------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249
                    +N G+                         L   HP  +     +      
Sbjct: 143 LG-KEYTVTKNHGQLYTGPVLQLTKQKDAYEWSEKNYRILPLFHPAAIFYNRSLVPVIHQ 201

Query: 250 ALITLKKALKN 260
               L   L+ 
Sbjct: 202 DWQVLASLLQQ 212


>gi|257899166|ref|ZP_05678819.1| uracil-DNA glycosylase [Enterococcus faecium Com15]
 gi|257837078|gb|EEV62152.1| uracil-DNA glycosylase [Enterococcus faecium Com15]
          Length = 213

 Score = 93.7 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 57/191 (29%), Gaps = 30/191 (15%)

Query: 99  TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158
            +         LM++G  P  ++  +  PFSG+ G  L + L S  + R +++I+     
Sbjct: 23  FVAGQGPLHPKLMLVGEAPGKTEIDTHIPFSGQAGKELMQALSSTGLTREEVYITSAVRS 82

Query: 159 HPPGNRN-----------------LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
            P    +                  +  E+    PI+  ++  + PK++  +GN      
Sbjct: 83  RPYRVTHRINKRTQQTETVYPNRTPTRSEVFAHAPILDYELMEVQPKLIATLGNIGLQRL 142

Query: 202 FNNDAQKTYQNLGKWSN------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249
                    +N G+                         L   HP  +     +      
Sbjct: 143 LG-KEYTVTKNHGQLYTGPVLQLTEQKDAYEWSEKNYRILPLFHPAAIFYNRSLVPVIHQ 201

Query: 250 ALITLKKALKN 260
               L   L+ 
Sbjct: 202 DWQVLASLLQQ 212


>gi|325206784|gb|ADZ02237.1| putative uracil-DNA glycosylase, family 4 [Neisseria meningitidis
           M04-240196]
          Length = 247

 Score = 93.7 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 85/270 (31%), Gaps = 37/270 (13%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDE----------PNNEATYESQRKEKSIDSAI 50
           M S R L   + L +   +   G   +             P  +      ++     +  
Sbjct: 1   MLSARYLHLHEALGLGPMWLKRGAVVLPSATLPESPTQIRPQKQTVLSIPQRPSEQHTGQ 60

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
             +  ++ + +  V       +    L  +   +               + A       L
Sbjct: 61  ARLKTMKVLETTAVHTRKPAPETETPLSGVSDGIA-------------PVPAASGI-TKL 106

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170
            ++   P   D + G+ F GK G +LD +L+++ +    +H +        GN   S   
Sbjct: 107 AVVSLCPPTEDMVYGQLFHGKAGVLLDNILKAVGLDAAYVHKTCWVKTAAVGNPMPSEAA 166

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230
           +        R+++      +LF+G      F   + Q   + L          +  P   
Sbjct: 167 IANALEQTARELDGCRAPAVLFLG----QAFVKPERQAMIETL---------CAGRPFFI 213

Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALKN 260
             HP  L++ P +K   W  L  LK+ L  
Sbjct: 214 IDHPARLLRQPELKARAWQTLKQLKRVLAQ 243


>gi|171320930|ref|ZP_02909924.1| Uracil-DNA glycosylase superfamily [Burkholderia ambifaria MEX-5]
 gi|171093795|gb|EDT38932.1| Uracil-DNA glycosylase superfamily [Burkholderia ambifaria MEX-5]
          Length = 171

 Score = 93.7 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 58/137 (42%), Gaps = 11/137 (8%)

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPGNRNLS 167
           M++G  P D ++ +G PF G  G MLD+ L+   I R  ++++       W P G R L 
Sbjct: 1   MLVGEQPGDQEDRTGIPFVGAAGRMLDRALEEAGIERASVYVTNAVKHFKWEPRGKRRLH 60

Query: 168 ----NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH 223
                 E+  CR  + R++  + P++++ +G         ++     +            
Sbjct: 61  KTPAQREVAACRYWLERELAALGPRVIVALGATALRAVLQDNDATLERTRQPVR----SP 116

Query: 224 SIIPTLATVHPQELIQY 240
                +AT HP  +++ 
Sbjct: 117 DGCLVVATYHPSYVLRT 133


>gi|42519381|ref|NP_965311.1| hypothetical protein LJ1509 [Lactobacillus johnsonii NCC 533]
 gi|41583669|gb|AAS09277.1| hypothetical protein LJ_1509 [Lactobacillus johnsonii NCC 533]
          Length = 212

 Score = 93.3 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 59/189 (31%), Gaps = 31/189 (16%)

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160
                    LMI+G  P   +  S  PF G +G  L K L SI + R  ++I+      P
Sbjct: 25  FGAGPVHPKLMIVGEAPGREEIESLIPFHGASGKELMKSLASIGLKRDDVYITSAVRSRP 84

Query: 161 PG-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
                              NR  +  E+    P +  +I+ + PKI++ +G        +
Sbjct: 85  YSIKHTFSKKENKEVIKYPNRKPTKKEILAHAPFLDYEIKCVKPKIIVTVGTTALTRLLD 144

Query: 204 NDAQKTYQNLGKWSN-------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
            D  +     GK                          +   HP  +     + +     
Sbjct: 145 -DKYEISNVHGKIIENTPILELNDKKDGYIWSKEKYIVVPQYHPAAVFYNRKLAEVIAQD 203

Query: 251 LITLKKALK 259
            + +K  +K
Sbjct: 204 WLNVKPLIK 212


>gi|227890246|ref|ZP_04008051.1| uracil-DNA glycosylase [Lactobacillus johnsonii ATCC 33200]
 gi|227849060|gb|EEJ59146.1| uracil-DNA glycosylase [Lactobacillus johnsonii ATCC 33200]
          Length = 212

 Score = 93.3 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 59/189 (31%), Gaps = 31/189 (16%)

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160
                    LMI+G  P   +  S  PF G +G  L K L SI + R  ++I+      P
Sbjct: 25  FGAGPVHPKLMIVGEAPGREEIESLIPFHGASGKELMKSLASIGLKREDVYITSAVRSRP 84

Query: 161 PG-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
                              NR  +  E+    P +  +I+ + PKI++ +G        +
Sbjct: 85  YSIKHTFSKKENKEVINYPNRKPTKKEILAHAPFLDYEIKCVKPKIIVTVGTTALTRLLD 144

Query: 204 NDAQKTYQNLGKWSN-------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
            D  +     GK                          +   HP  +     + +     
Sbjct: 145 -DKYEISNVHGKIIENTPILELNDKKDGYIWSKEKYIVVPQYHPAAVFYNRKLAEVIAQD 203

Query: 251 LITLKKALK 259
            + +K  +K
Sbjct: 204 WLNVKPLIK 212


>gi|255528586|ref|ZP_05395357.1| Uracil-DNA glycosylase superfamily [Clostridium carboxidivorans P7]
 gi|296188800|ref|ZP_06857180.1| uracil-DNA glycosylase, family 4 [Clostridium carboxidivorans P7]
 gi|255507721|gb|EET84190.1| Uracil-DNA glycosylase superfamily [Clostridium carboxidivorans P7]
 gi|296046609|gb|EFG86063.1| uracil-DNA glycosylase, family 4 [Clostridium carboxidivorans P7]
          Length = 196

 Score = 93.3 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 69/196 (35%), Gaps = 18/196 (9%)

Query: 80  LKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKM 139
           LK  ++   + +        I        +++ +G  P  ++   GKPF G  G   +K 
Sbjct: 5   LKQKIKQISENYTEEKIGGFIYGDGPIPCNILFVGEAPGKTEVEEGKPFVGVAGKNFEKH 64

Query: 140 LQSIEIMRTQIHISMISPWHPPG------------NRNLSNIEMEICRPIIMRQIELISP 187
           L SI + R  +HI+    + P              NR     E+ + R ++  +I L++P
Sbjct: 65  LNSIGLSRKDVHITNTCFFRPIKIKESSSGRTTISNRPPKTSEVNLFREVLNEEINLVNP 124

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIKK 245
           KI++ +GN       N  +    +  G                  HP  L   +      
Sbjct: 125 KIIVTLGNVPLKRLTNFKS--IGECHGDL--YFNNELKRYVFPMYHPSALTYNRNEEFYS 180

Query: 246 NTWHALITLKKALKNL 261
                   LK+AL  +
Sbjct: 181 MYQEDWNKLKEALNKI 196


>gi|227544030|ref|ZP_03974079.1| uracil-DNA glycosylase [Lactobacillus reuteri CF48-3A]
 gi|300908295|ref|ZP_07125760.1| uracil-DNA glycosylase [Lactobacillus reuteri SD2112]
 gi|227185969|gb|EEI66040.1| uracil-DNA glycosylase [Lactobacillus reuteri CF48-3A]
 gi|300894542|gb|EFK87899.1| uracil-DNA glycosylase [Lactobacillus reuteri SD2112]
          Length = 217

 Score = 93.3 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 63/194 (32%), Gaps = 30/194 (15%)

Query: 97  LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156
                       DLM++G  P   +     PFSG +G  L K+++SI   R+ ++I+ + 
Sbjct: 23  TGFTPGQGPLNPDLMLVGEAPGRYEEKVNIPFSGASGQELMKLIESIGYSRSTVYITSVV 82

Query: 157 PWHPPGNRN-----------------LSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199
              P   +                   +  E+    P+   ++  + PKI++ +GN    
Sbjct: 83  RQRPYSIKKAIDKKTGEVIEKRPNRTPTKKEVLAFAPLFDWELAQVKPKIIVTLGNTALQ 142

Query: 200 FFFNNDAQKTYQNLGKWS------------NLCTPHSIIPTLATVHPQELIQYPLIKKNT 247
               + A    +  G+                         +   HP  ++    ++   
Sbjct: 143 RLLGSQA-NIGKLHGQLLHEKIQRTNDAHDGYELTTDKHWIMPMYHPAAVLYARRLEPTI 201

Query: 248 WHALITLKKALKNL 261
                 L + +K +
Sbjct: 202 KADWQRLGQDIKKM 215


>gi|323490492|ref|ZP_08095698.1| uracil-DNA glycosylase family protein [Planococcus donghaensis
           MPA1U2]
 gi|323395758|gb|EGA88598.1| uracil-DNA glycosylase family protein [Planococcus donghaensis
           MPA1U2]
          Length = 214

 Score = 93.3 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 68/188 (36%), Gaps = 29/188 (15%)

Query: 99  TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158
            +  +  E   +M++G  P +++  +G PF+G+ G  L   L+S+ ++R  ++I+     
Sbjct: 24  FVWGSGPENPAIMLVGEAPGENEIETGIPFTGRAGKELMASLESVGLVREDVYITSAVRS 83

Query: 159 HPPG----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202
            P                  NR  +  E+    PI+  +I  I P +++ +GN       
Sbjct: 84  RPYKWGTKKKRNGEVIERKYNRAPTKKEIIAHAPILDTEIRDIHPPLIVTLGNVGLQRLI 143

Query: 203 NNDAQKTYQNLGKWSN------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
              A+   +  G                      +     T HP  +   P +++     
Sbjct: 144 GPKAKV-TELHGLLIETPILYWDDVNNCFKETDEVYHIFPTFHPASVFYNPPVRELKDED 202

Query: 251 LITLKKAL 258
              LK+ L
Sbjct: 203 WRRLKELL 210


>gi|15677708|ref|NP_274869.1| putative DNA polymerase [Neisseria meningitidis MC58]
 gi|254804303|ref|YP_003082524.1| putative uracil-DNA glycosylase [Neisseria meningitidis alpha14]
 gi|7227131|gb|AAF42207.1| putative DNA polymerase, bacteriophage-type [Neisseria meningitidis
           MC58]
 gi|254667845|emb|CBA03868.1| putative uracil-DNA glycosylase [Neisseria meningitidis alpha14]
 gi|254672664|emb|CBA06503.1| bacteriophage-related DNA polymerase [Neisseria meningitidis
           alpha275]
 gi|316985486|gb|EFV64433.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
 gi|325139532|gb|EGC62072.1| putative uracil-DNA glycosylase, family 4 [Neisseria meningitidis
           CU385]
 gi|325200930|gb|ADY96385.1| putative uracil-DNA glycosylase, family 4 [Neisseria meningitidis
           H44/76]
          Length = 245

 Score = 92.9 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 90/271 (33%), Gaps = 41/271 (15%)

Query: 1   MTSKRILSQEQILTIAL-FYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNI--- 56
           M S R L   + L +   +   +        P N     +Q + +++ +A    +     
Sbjct: 1   MLSARYLHLHEALGLGPMWLKQA---AAVLPPKNTPAPSAQARPQTVRAAPIRPSQPHNG 57

Query: 57  -------RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD 109
                  + + +  V       +    L  L   +               + A       
Sbjct: 58  QARLETMKALETAAVPTRKPAPETETPLPGLSDGIA-------------PVPAASGI-TK 103

Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI 169
           L ++   P   D + G+ F GK G +LD +L+++ +    +H +        GN   S  
Sbjct: 104 LAVVSLCPPIEDAVYGQLFHGKAGILLDNILKAVGLDAAYVHKTCWVKTAAVGNPMPSEQ 163

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
            +      I R+++      +LF+G      F   + Q   + L             P  
Sbjct: 164 AVANALGQIARELDGCRAPAVLFLG----QAFVQPERQTMIETL---------CGSRPFF 210

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
              HP  L++ P +K   W  L  LK+AL+ 
Sbjct: 211 IIDHPARLLRQPELKARAWQVLKQLKRALRQ 241


>gi|298369745|ref|ZP_06981062.1| uracil-DNA glycosylase, family 4 [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298282302|gb|EFI23790.1| uracil-DNA glycosylase, family 4 [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 265

 Score = 92.9 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 49/285 (17%), Positives = 93/285 (32%), Gaps = 49/285 (17%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPI------- 53
           M S R L   + L +   + +     VF  P+  A  +S+       +            
Sbjct: 1   MLSSRYLHLHEALGLGPMWLNK--DAVF-SPSETAPVKSKDAVPPAAAKPVAQAVQAAAS 57

Query: 54  -------------TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI 100
                        +      +    QA+   + A  + E+++           + + + +
Sbjct: 58  GRRARMAAMAAVGSQTEAPPAATPFQAEGPPETAP-VAEMRA-----KSVPPAAPTPAAV 111

Query: 101 CATQTEG-------QDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHIS 153
            +             ++M+I   PS  D ++G  FSG  G +LDKML ++ +   Q + +
Sbjct: 112 FSDGLPRIETSVRPSEIMVISICPSTEDCLAGHLFSGAAGVLLDKMLAAVGLQAHQAYKT 171

Query: 154 MISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL 213
                 P       N  +    P +  ++     K +LF+G   +      D  +     
Sbjct: 172 SWIKTAPISGDRPDNARISGELPHVRTELAQSQAKAVLFLGQDFEKPELAKDMAQLC--- 228

Query: 214 GKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
                       +P     HP  L++ P  K   W  L  LK+ L
Sbjct: 229 ----------GGLPFFVIPHPARLLRQPQFKARAWAELKKLKRLL 263


>gi|315646284|ref|ZP_07899404.1| Uracil-DNA glycosylase superfamily protein [Paenibacillus vortex
           V453]
 gi|315278483|gb|EFU41799.1| Uracil-DNA glycosylase superfamily protein [Paenibacillus vortex
           V453]
          Length = 220

 Score = 92.9 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 63/198 (31%), Gaps = 36/198 (18%)

Query: 96  SLSTI----CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH 151
           +   +        T    +M +G  P   + + G+PF G+ G  ++  L+ + + R Q++
Sbjct: 22  AHQPVQGFLLGRGTSSAAVMFVGEAPGAHEVLEGRPFVGQAGQEMNAYLERLNLTREQVY 81

Query: 152 ISMISPWHPPG----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           I+      P                  NR  +  E+    P++  +I  + PKI+  +GN
Sbjct: 82  ITSAMRSRPYKEKVIVRASGENIISRSNRTPTKAEILAHAPLLDEEIRWVQPKIIAPMGN 141

Query: 196 KTKNFFFNNDAQKTYQNLGKWSN---------------LCTPHSIIPTLATVHPQELIQY 240
              +    +  +      GK                                HP  ++  
Sbjct: 142 TALHRLIGSH-ETVTSLHGKLIEGPVQQAISLEDASAGYRFSTETYMIFPLFHPAAVLYN 200

Query: 241 PLIKKNTWHALITLKKAL 258
             + +     L  L + +
Sbjct: 201 RKLSRLIESDLDILARMI 218


>gi|290559866|gb|EFD93189.1| uracil DNA glycosylase superfamily protein [Candidatus Parvarchaeum
           acidophilus ARMAN-5]
          Length = 97

 Score = 92.5 bits (228), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 44/91 (48%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
             L  + + ++    C LC+   + +     +   ++++G  P  ++++ G+PF G +G 
Sbjct: 2   EELEAIANEIKRCTLCDLCNKRNNAVPGEGYDKARIVLLGEAPGKNEDLQGRPFIGMSGR 61

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRN 165
            L K L+ + I R  + I+      PP NRN
Sbjct: 62  FLTKYLEKVGIKREAVFITNAVKCRPPNNRN 92


>gi|229016886|ref|ZP_04173814.1| Uracil-DNA glycosylase superfamily [Bacillus cereus AH1273]
 gi|229023092|ref|ZP_04179606.1| Uracil-DNA glycosylase superfamily [Bacillus cereus AH1272]
 gi|228738238|gb|EEL88720.1| Uracil-DNA glycosylase superfamily [Bacillus cereus AH1272]
 gi|228744447|gb|EEL94521.1| Uracil-DNA glycosylase superfamily [Bacillus cereus AH1273]
          Length = 216

 Score = 92.5 bits (228), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 65/186 (34%), Gaps = 30/186 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
                   LM++G  P +++  +G PFSG+ G  L + L+ I + R +++I+      P 
Sbjct: 29  GQGPRNPKLMLVGEAPGETEIHNGIPFSGRAGKHLMEFLERIHVTREEVYITSAVRSRPY 88

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++ELI P +++ +GN          
Sbjct: 89  KWREKRERNGEIIQKKYNRTPNQGEILAHAPLLDYELELIHPPVIVTLGNIALQRLVG-K 147

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + +  +  L 
Sbjct: 148 NNKITSVHGELLKQPVQQLKDSSGTEFIWTEKEYYIFPTFHPASIFYNRSLLELIYEDLE 207

Query: 253 TLKKAL 258
            LK+ +
Sbjct: 208 KLKRCI 213


>gi|330821073|ref|YP_004349935.1| phage SPO1 DNA polymerase-related protein [Burkholderia gladioli
           BSR3]
 gi|327373068|gb|AEA64423.1| phage SPO1 DNA polymerase-related protein [Burkholderia gladioli
           BSR3]
          Length = 215

 Score = 92.5 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 75/193 (38%), Gaps = 18/193 (9%)

Query: 55  NIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIG 114
               +  P    A +      +L        +   C L + +   +         +M++G
Sbjct: 3   PSAVLAEPPGADALAGQDAPPTLD-------ACRRCPLWARATQPVDGRGPATAAIMLVG 55

Query: 115 YTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPGNRN----LS 167
             P D D+  G PFSG  G +L++ L+   + R  ++++ +     W   G R      +
Sbjct: 56  EQPGDHDDRRGAPFSGTAGGILERALREASLARATVYLTHVVKHFKWEARGKRRLPVEPA 115

Query: 168 NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227
             E+  CR  + R+I+ ++P++++ +G        ++   +               S + 
Sbjct: 116 LEEVAACRYWLDREIDAVAPRVIVALGALAWRAVLDDPLARLPVAPLPVR----LPSGLQ 171

Query: 228 TLATVHPQELIQY 240
            LAT HP  +++ 
Sbjct: 172 LLATQHPDFVLRT 184


>gi|324325645|gb|ADY20905.1| uracil-DNA glycosylase family protein [Bacillus thuringiensis
           serovar finitimus YBT-020]
          Length = 213

 Score = 92.5 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 66/185 (35%), Gaps = 30/185 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E   +M++G  P +++  +G PFSG+ G  L   L+ I + R +++I+      P 
Sbjct: 26  GQGPENPKIMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 85

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E ++PK+++ +GN          
Sbjct: 86  KWREKKERNGEIVQKKYNRTPNQGEILAHAPLLDYELEKLNPKLIVTLGNIGLQRLTG-K 144

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
            +K     G+                            T HP  +     + +  +  L 
Sbjct: 145 GKKITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYHIFPTFHPASIFYNRSLLELIYEDLE 204

Query: 253 TLKKA 257
            LK+ 
Sbjct: 205 KLKQY 209


>gi|257125890|ref|YP_003164004.1| phage SPO1 DNA polymerase-related protein [Leptotrichia buccalis
           C-1013-b]
 gi|257049829|gb|ACV39013.1| phage SPO1 DNA polymerase-related protein [Leptotrichia buccalis
           C-1013-b]
          Length = 177

 Score = 92.5 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 74/183 (40%), Gaps = 8/183 (4%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             +LK  +     C L    +  I     +  D++ +  + S+ ++   K  + K     
Sbjct: 2   WDDLKLEIDMCAKCVLEKVRIKPIIGEGNKNADILFVLDSVSEEEDNKQKLLADKNSEYF 61

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            K L+  +I   + + + ++   P GN       +  C   ++ QI LI+PK ++ +G +
Sbjct: 62  KKFLEYSKIDIEKCYFTTLTKCSPHGNLID-EDSILRCHEFLIAQIALINPKYIVTVGER 120

Query: 197 TKNFFFNNDAQKTYQNL-GKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
              FF  N  ++  +NL G+  +    +  I  +       L +    +K  W  LI + 
Sbjct: 121 ATRFFLQNMIKEDIRNLVGQMYDF---YGEIKIVPIYDISYLFKATDKEK--WK-LIKIL 174

Query: 256 KAL 258
           + L
Sbjct: 175 EKL 177


>gi|196234456|ref|ZP_03133282.1| Uracil-DNA glycosylase superfamily [Chthoniobacter flavus Ellin428]
 gi|196221512|gb|EDY16056.1| Uracil-DNA glycosylase superfamily [Chthoniobacter flavus Ellin428]
          Length = 159

 Score = 92.1 bits (227), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 72/160 (45%), Gaps = 17/160 (10%)

Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS---PWHPPG----NRNL 166
           G  P D ++ +G+PF G  G +LD+ L+   I R + +++       W P G    ++  
Sbjct: 2   GEQPGDREDRAGRPFVGPAGKLLDRALEEAGIDRQETYVTNAVKHFKWEPRGKRRLHKKP 61

Query: 167 SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII 226
           S+ ++  C+P +  +++ I+P++L+ +G+        +  +       +   + + +   
Sbjct: 62  SSRDIAACKPWLEAELQAIAPRVLVLLGSTAAQTILGSKVRV---LRDRGHAMPSEYCQ- 117

Query: 227 PTLATVHPQELIQYPLIK------KNTWHALITLKKALKN 260
            T  TVHP  L++ P  +            L  + + L++
Sbjct: 118 KTFVTVHPSSLLRAPDEESRDRNYAEFVADLKKVARLLRS 157


>gi|325133517|gb|EGC56180.1| putative uracil-DNA glycosylase, family 4 [Neisseria meningitidis
           M13399]
          Length = 245

 Score = 92.1 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 51/269 (18%), Positives = 90/269 (33%), Gaps = 37/269 (13%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITN----- 55
           M S R L   + L +   +   G   V    N  AT    R +    + I+P        
Sbjct: 1   MLSARYLHLHEALGLGPMWLKRGA-AVLPPKNTPATPAQARPQTVRAAPIRPSQPHNGQA 59

Query: 56  ----IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLM 111
               ++ + +  V       +    L  +   +               + A       L 
Sbjct: 60  RLETMKALETAAVPTRKPAPETGTPLSGVSDGIA-------------PVPAASGI-TKLA 105

Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEM 171
           ++   P   D + G+ F GK G +LD +L+++ +    +H +        GN   S   +
Sbjct: 106 VVSLCPPTEDMVYGQLFHGKAGVLLDNILKAVGLDAAYVHKTSWVKTAAVGNPMPSEQAI 165

Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231
                 I R+++      +LF+G      F   + Q   + L             P    
Sbjct: 166 ADALGQIARELDGCRAPAVLFLG----QAFVQPERQAMIETL---------CGSRPFFII 212

Query: 232 VHPQELIQYPLIKKNTWHALITLKKALKN 260
            HP  L++ P +K   W  L  LK+AL+ 
Sbjct: 213 DHPARLLRQPELKARAWQVLKQLKRALRQ 241


>gi|168698542|ref|ZP_02730819.1| putative DNA polymerase related protein [Gemmata obscuriglobus UQM
           2246]
          Length = 446

 Score = 92.1 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 63/213 (29%), Gaps = 18/213 (8%)

Query: 34  EATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLC 93
            AT         + S           H+     A +    A  L  L++  RS   C  C
Sbjct: 222 WATLPEAAIIPDLLSEAGDRVAAMVAHAEGAGSAAAFMPAARDLDSLRAAARSCTACGRC 281

Query: 94  STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHIS 153
                        G  ++++G  P           SG   ++L   L         ++ +
Sbjct: 282 GPGAPPAFGVGPGGARVVLVGDHPRA---------SGAADDLLAGALAEAGFDPAAVYRT 332

Query: 154 MISPWHPPGNRNLSNIEME----ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209
                  P     +  E       CRP +  ++  ++P +++ +G             + 
Sbjct: 333 HAVK-RAPRPSPAAPREPHRGAGACRPWLTAELAALAPAVVVCLGPHAARAVLGP-LFRF 390

Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL 242
            +  G          +   +AT HP  +++ P 
Sbjct: 391 AERRG---EPVAAGPVARAIATHHPSAVLRDPA 420


>gi|42780731|ref|NP_977978.1| uracil-DNA glycosylase family protein [Bacillus cereus ATCC 10987]
 gi|42736651|gb|AAS40586.1| uracil-DNA glycosylase family protein [Bacillus cereus ATCC 10987]
          Length = 213

 Score = 92.1 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 30/185 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I + R +++I+      P 
Sbjct: 26  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTRDEVYITSAVRSRPY 85

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E I+PK+++ +GN         D
Sbjct: 86  KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKINPKLIVTLGNIGLQRLTGKD 145

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + +  +  L 
Sbjct: 146 K-KITDVHGQLFKQPIQKLKDMQSAEFTWSEKEYYIFPTFHPASIFYNRSLLELIYEDLE 204

Query: 253 TLKKA 257
            LK+ 
Sbjct: 205 KLKRY 209


>gi|227511535|ref|ZP_03941584.1| uracil-DNA glycosylase [Lactobacillus buchneri ATCC 11577]
 gi|227523737|ref|ZP_03953786.1| uracil-DNA glycosylase [Lactobacillus hilgardii ATCC 8290]
 gi|227085180|gb|EEI20492.1| uracil-DNA glycosylase [Lactobacillus buchneri ATCC 11577]
 gi|227089052|gb|EEI24364.1| uracil-DNA glycosylase [Lactobacillus hilgardii ATCC 8290]
          Length = 211

 Score = 92.1 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 21/183 (11%)

Query: 99  TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158
            +         ++++G  P D +   G PF G +G  LD+ L S+ + R  I+I+ +   
Sbjct: 28  FVAGEGGYHPKVLLLGEAPGDKEVKLGHPFQGPSGKELDRWLASLGLTREDIYITGVVSA 87

Query: 159 HPPG--------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210
            P          +R  +N E++   P+   ++      +++ +GN +      N A K  
Sbjct: 88  RPFSIGKTGRKRDRRPNNTEVKQWAPMFDFEMTHFKDLLMIPMGNASLQRLLGNKA-KIG 146

Query: 211 QNLGKWSNLCTPH------------SIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
              G+       +            +I       HP    ++  +K         LKK L
Sbjct: 147 DLHGQLIEQPIQYLDKSTDTFKLTDNIRKIFPLYHPSYSKRFKNMKTVVDQDSANLKKLL 206

Query: 259 KNL 261
             +
Sbjct: 207 AQV 209


>gi|227508552|ref|ZP_03938601.1| uracil-DNA glycosylase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227191884|gb|EEI71951.1| uracil-DNA glycosylase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 211

 Score = 92.1 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 21/183 (11%)

Query: 99  TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158
            +         ++++G  P D +   G PF G +G  LD+ L S+ + R  I+I+ +   
Sbjct: 28  FVAGEGGYHPKVLLLGEAPGDKEVKLGHPFQGPSGKELDRWLASLGLTREDIYITGVVSA 87

Query: 159 HPPG--------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210
            P          +R  +N E++   P+   ++      +++ +GN +      N A K  
Sbjct: 88  RPFSIGKTGRKRDRRPNNTEVKQWAPMFDFEMTHFKDLLMIPMGNASLQRLLGNKA-KIG 146

Query: 211 QNLGKWSNLCTPH------------SIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
              G+       +            +I       HP    ++  +K         LKK L
Sbjct: 147 DLHGQLIEQPIQYLDKSTDTFKLTDNIRKIFPLYHPSYSKRFKNMKTVVDQDSANLKKLL 206

Query: 259 KNL 261
             +
Sbjct: 207 AQV 209


>gi|227515436|ref|ZP_03945485.1| uracil-DNA glycosylase [Lactobacillus fermentum ATCC 14931]
 gi|227086195|gb|EEI21507.1| uracil-DNA glycosylase [Lactobacillus fermentum ATCC 14931]
          Length = 223

 Score = 92.1 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 66/191 (34%), Gaps = 30/191 (15%)

Query: 99  TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158
            +         +M++G  P  S+  S  PFSG +G  L K+L+ I + R  +HI+ +   
Sbjct: 28  FVPGAGPNHPAVMLVGEAPGRSETDSRVPFSGTSGKELIKLLEEIGLSRATVHITSVVRK 87

Query: 159 HPPG-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
            P                   NR  +  E+    P+   +++ ++P++++ +GN +    
Sbjct: 88  RPYSVKVVTDKKTGQRVTKYPNRTPTKKEVLAFGPLFDWELKTVTPQVVVPLGNTSLQRL 147

Query: 202 FNNDAQKTYQNLGKWS------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249
              +A K     G+                    +    +   HP   +    ++     
Sbjct: 148 LGPEA-KIGDLHGQVLHQLVLETRPDHQGYQMGTTPYYIVPMYHPAAFLYARRLEPTVRA 206

Query: 250 ALITLKKALKN 260
                 K LK 
Sbjct: 207 DWQAFGKWLKE 217


>gi|229160579|ref|ZP_04288574.1| Uracil-DNA glycosylase superfamily [Bacillus cereus R309803]
 gi|228622989|gb|EEK79820.1| Uracil-DNA glycosylase superfamily [Bacillus cereus R309803]
          Length = 215

 Score = 92.1 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 66/186 (35%), Gaps = 30/186 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I++ R +++I+      P 
Sbjct: 27  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMVFLERIQVTREEVYITSAVRSRPY 86

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E I PK+++ +GN         +
Sbjct: 87  KWREKKERNGEIIQKKYNRTPNQGEITAHAPLLDYELEQIKPKLIVTLGNIGLQRLTGKN 146

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     GK                            T HP  +     + +  +  L 
Sbjct: 147 K-KITDVHGKLLKQPIQKLKDMQSAEFTWSEKEYHIFPTFHPASIFYNRSLLELIYEDLE 205

Query: 253 TLKKAL 258
            LK+ +
Sbjct: 206 KLKQHI 211


>gi|259502467|ref|ZP_05745369.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
 gi|259169610|gb|EEW54105.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
          Length = 219

 Score = 92.1 bits (227), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 57/189 (30%), Gaps = 28/189 (14%)

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160
                   DLM++G  P   +     PFSG +G  L K+L SI   R   +I+ +    P
Sbjct: 27  PGQGPLHPDLMLVGEAPGRHEEQVNIPFSGASGQELMKLLNSIGYSRNNTYITSVVRQRP 86

Query: 161 PGNRN-----------------LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
              +                   +  E+    P+   ++  + P+I++ +GN        
Sbjct: 87  YSIKRVRDKKTGVLVEKRPNRTPTKKEVLAFAPLFDWELATVGPRIIVPLGNTALQRLLG 146

Query: 204 NDAQKTYQNLGKW-----------SNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             A     +  K                   +    +   HP  ++    +         
Sbjct: 147 PSANIGDLHGQKLVQPIQQAASDGRGYQWSPNEYTLVPMYHPAAILYARRLLPTVQEDWQ 206

Query: 253 TLKKALKNL 261
            L + +  L
Sbjct: 207 KLGRLVAAL 215


>gi|69249163|ref|ZP_00604885.1| Uracil-DNA glycosylase superfamily [Enterococcus faecium DO]
 gi|257879338|ref|ZP_05658991.1| uracil-DNA glycosylase [Enterococcus faecium 1,230,933]
 gi|257881846|ref|ZP_05661499.1| uracil-DNA glycosylase [Enterococcus faecium 1,231,502]
 gi|257890164|ref|ZP_05669817.1| uracil-DNA glycosylase [Enterococcus faecium 1,231,410]
 gi|257893492|ref|ZP_05673145.1| uracil-DNA glycosylase [Enterococcus faecium 1,231,408]
 gi|258615744|ref|ZP_05713514.1| DNA polymerase [Enterococcus faecium DO]
 gi|260558780|ref|ZP_05830969.1| uracil-DNA glycosylase superfamily [Enterococcus faecium C68]
 gi|293550595|ref|ZP_06673263.1| DNA polymerase [Enterococcus faecium E1039]
 gi|293559560|ref|ZP_06676094.1| DNA polymerase [Enterococcus faecium E1162]
 gi|293567555|ref|ZP_06678899.1| DNA polymerase [Enterococcus faecium E1071]
 gi|294621782|ref|ZP_06700942.1| DNA polymerase [Enterococcus faecium U0317]
 gi|314937900|ref|ZP_07845216.1| uracil-DNA glycosylase, family 4 [Enterococcus faecium TX0133a04]
 gi|314941391|ref|ZP_07848284.1| uracil-DNA glycosylase, family 4 [Enterococcus faecium TX0133C]
 gi|314948554|ref|ZP_07851934.1| uracil-DNA glycosylase, family 4 [Enterococcus faecium TX0082]
 gi|314951309|ref|ZP_07854363.1| uracil-DNA glycosylase, family 4 [Enterococcus faecium TX0133A]
 gi|314992860|ref|ZP_07858261.1| uracil-DNA glycosylase, family 4 [Enterococcus faecium TX0133B]
 gi|314998064|ref|ZP_07862952.1| uracil-DNA glycosylase, family 4 [Enterococcus faecium TX0133a01]
 gi|68194258|gb|EAN08778.1| Uracil-DNA glycosylase superfamily [Enterococcus faecium DO]
 gi|257813566|gb|EEV42324.1| uracil-DNA glycosylase [Enterococcus faecium 1,230,933]
 gi|257817504|gb|EEV44832.1| uracil-DNA glycosylase [Enterococcus faecium 1,231,502]
 gi|257826524|gb|EEV53150.1| uracil-DNA glycosylase [Enterococcus faecium 1,231,410]
 gi|257829871|gb|EEV56478.1| uracil-DNA glycosylase [Enterococcus faecium 1,231,408]
 gi|260075239|gb|EEW63552.1| uracil-DNA glycosylase superfamily [Enterococcus faecium C68]
 gi|291589656|gb|EFF21460.1| DNA polymerase [Enterococcus faecium E1071]
 gi|291598669|gb|EFF29726.1| DNA polymerase [Enterococcus faecium U0317]
 gi|291603216|gb|EFF33400.1| DNA polymerase [Enterococcus faecium E1039]
 gi|291606436|gb|EFF35836.1| DNA polymerase [Enterococcus faecium E1162]
 gi|313587906|gb|EFR66751.1| uracil-DNA glycosylase, family 4 [Enterococcus faecium TX0133a01]
 gi|313592664|gb|EFR71509.1| uracil-DNA glycosylase, family 4 [Enterococcus faecium TX0133B]
 gi|313596526|gb|EFR75371.1| uracil-DNA glycosylase, family 4 [Enterococcus faecium TX0133A]
 gi|313599814|gb|EFR78657.1| uracil-DNA glycosylase, family 4 [Enterococcus faecium TX0133C]
 gi|313642758|gb|EFS07338.1| uracil-DNA glycosylase, family 4 [Enterococcus faecium TX0133a04]
 gi|313645051|gb|EFS09631.1| uracil-DNA glycosylase, family 4 [Enterococcus faecium TX0082]
          Length = 213

 Score = 92.1 bits (227), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 56/188 (29%), Gaps = 30/188 (15%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
                   LM++G  P  ++  +  PFSG+ G  L + L S  + R +++I+      P 
Sbjct: 26  GQGPLHPKLMLVGEAPGKTEIDTHVPFSGQAGKELMQALSSTGLTREEVYITSAVRSRPY 85

Query: 162 GNRN-----------------LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204
              +                  +  E+    PI+  ++  + PK++  +GN         
Sbjct: 86  RVTHRINKRTQQSETVYPNRTPTRSEVFAHAPILDYELMKVQPKLIATLGNIGLQRLLG- 144

Query: 205 DAQKTYQNLGKWSN------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
                 +N G+                         L   HP  +     +         
Sbjct: 145 KEYTVTKNHGQLYTGPVLQLTEQKDAYEWSEKNYRILPLFHPAAIFYNRSLVPVIHQDWQ 204

Query: 253 TLKKALKN 260
            L   L+ 
Sbjct: 205 VLASLLQQ 212


>gi|58616410|ref|YP_195540.1| N-terminus of phage DNA or Uracil-DNA glycosylase polymerase
           [Azoarcus sp. EbN1]
 gi|56315872|emb|CAI10516.1| probable N-terminus of phage DNA or Uracil-DNA glycosylase
           polymerase [Aromatoleum aromaticum EbN1]
          Length = 200

 Score = 91.7 bits (226), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 63/161 (39%), Gaps = 8/161 (4%)

Query: 86  SFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIE 144
               C  LC++    + +T      L+ IG  P + ++  G  F+G+ G  LD++L    
Sbjct: 3   ECIRCPALCASRSQIVMSTPAPLGGLLAIGEAPGEKEDEMGIGFTGQAGKTLDRLLAEHG 62

Query: 145 IMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204
           I R     + I    PP NR  +  E++ C P +   IE   P++LL +G          
Sbjct: 63  IGREGYGRANICRCRPPENRKPTRAEVDACMPYLAEFIEQTRPRVLLLVGGTAAAHIVGT 122

Query: 205 DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK 245
            +        + S       + P +   HP   ++    ++
Sbjct: 123 GSLA---RRIEMSRSPGGTWVDPAMC--HPA--LRSLAAQR 156


>gi|296161278|ref|ZP_06844086.1| Uracil-DNA glycosylase superfamily [Burkholderia sp. Ch1-1]
 gi|295888436|gb|EFG68246.1| Uracil-DNA glycosylase superfamily [Burkholderia sp. Ch1-1]
          Length = 504

 Score = 91.7 bits (226), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 74/215 (34%), Gaps = 21/215 (9%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P   A    +R      S    +  +  +    V            L E    L +   C
Sbjct: 274 PPLPAHLARERSRLGAQSGTVTVPEMPPVEYSAVTPP---------LREPTGPLATCRRC 324

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150
            L   +   +         +M++G  P + +N +G PF+G  G++LD +L    + R  +
Sbjct: 325 ALWRNAKQAVAGAGAAQAAIMVVGEQPGEDENQNGTPFTGPAGHLLDTVLARAGLERAAL 384

Query: 151 HISMISPWH-------PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
           +++     +          +R  +  E+E C+  +  +   ++P++++ +G         
Sbjct: 385 YLTYAVKHYKWETIEQQRVHRTPALREVEACQYWLEHEFAQVAPRVVVTLGATALKALTG 444

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238
                +     ++      HS    +   HP   +
Sbjct: 445 AHVNLS-----EYLGQTICHSGRLIVPAWHPSYAL 474


>gi|294011720|ref|YP_003545180.1| uracil-DNA glycosylase superfamily [Sphingobium japonicum UT26S]
 gi|292675050|dbj|BAI96568.1| uracil-DNA glycosylase superfamily [Sphingobium japonicum UT26S]
          Length = 234

 Score = 91.7 bits (226), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 48/250 (19%), Positives = 86/250 (34%), Gaps = 29/250 (11%)

Query: 14  TIALFYADSGVYWVF-DEPNNEATY--ESQRKEKSIDSAIQPITNIRHIHSPLVQQADSI 70
               +++ +GV     +EP N      +S R   ++          + + S L   A   
Sbjct: 11  AYMAWWSLAGVDCAMGEEPTNWLRPLQQSARIRAAVPEGGPAQPRPQSLESFLTWLAQDA 70

Query: 71  AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130
           AQ                         + I         LM+I   P  +D  +G   S 
Sbjct: 71  AQPERRWPG------------------AAIMPAGPVDAPLMVITDMPDPADIGAGTLLSD 112

Query: 131 KTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
           + G + D ML++I + R  +H++ +    PPG    ++        +    + L +P+ L
Sbjct: 113 RAGQLFDAMLRAIGLQRQDVHLASLFLSRPPGAMVEASDLSAAAARMRTY-VMLAAPRRL 171

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
           L +G++T           +                +P  AT HP+ L+  P  K   WH 
Sbjct: 172 LLLGDRTIRTLLPATDSGS-------RVFNHDGGTLPVFATFHPRLLLGQPAAKAECWHV 224

Query: 251 LITLKKALKN 260
           L  L + +  
Sbjct: 225 LQGLIEEMAK 234


>gi|268319242|ref|YP_003292898.1| hypothetical protein FI9785_757 [Lactobacillus johnsonii FI9785]
 gi|262397617|emb|CAX66631.1| hypothetical protein predicted by Glimmer/Critica [Lactobacillus
           johnsonii FI9785]
          Length = 212

 Score = 91.7 bits (226), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 60/189 (31%), Gaps = 31/189 (16%)

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160
                    LMI+G  P   +  S  PF G +G  L K L SI++ R  ++I+      P
Sbjct: 25  FGAGPVHPKLMIVGEAPGREEIESLIPFHGASGKELMKSLASIDLKREDVYITSAVRSRP 84

Query: 161 PG-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
                              NR  +  E+    P +  +I+ + PKI++ +G        +
Sbjct: 85  YSIKHTFSKKENKEVIKYPNRKPTKKEILAHAPFLDYEIKCVKPKIIVTVGTTALTRLLD 144

Query: 204 NDAQKTYQNLGKWSN-------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
            D  +     GK                          +   HP  +     + +     
Sbjct: 145 -DKYEISNVHGKIIENTPILELNDKKDGYIWSKEKYIVVPQYHPAAVFYNRKLAEVIAQD 203

Query: 251 LITLKKALK 259
            + +K  +K
Sbjct: 204 WLNVKPLIK 212


>gi|291006474|ref|ZP_06564447.1| DNA polymerase bacteriophage-type [Saccharopolyspora erythraea NRRL
           2338]
          Length = 201

 Score = 91.7 bits (226), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 43/126 (34%), Gaps = 8/126 (6%)

Query: 65  QQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNIS 124
             A+        L  L+   R    C L  ++  T+  +      ++ +G  P D ++I 
Sbjct: 10  STAEPFVPSRGGLRALRDAARDCRGCDLYKSATQTVFGSGPSRARVLFVGEQPGDREDIE 69

Query: 125 GKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIM---RQ 181
           G+PF G  G +LD  L    I R   +++         +      E    R        Q
Sbjct: 70  GEPFVGPAGGLLDLALAEAGIERDDAYLTNAVK-----HFKFVPQERGKRRIHRKPSTAQ 124

Query: 182 IELISP 187
           +    P
Sbjct: 125 MRACRP 130


>gi|134100723|ref|YP_001106384.1| DNA polymerase bacteriophage-type [Saccharopolyspora erythraea NRRL
           2338]
 gi|133913346|emb|CAM03459.1| DNA polymerase bacteriophage-type [Saccharopolyspora erythraea NRRL
           2338]
          Length = 197

 Score = 91.7 bits (226), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 43/126 (34%), Gaps = 8/126 (6%)

Query: 65  QQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNIS 124
             A+        L  L+   R    C L  ++  T+  +      ++ +G  P D ++I 
Sbjct: 6   STAEPFVPSRGGLRALRDAARDCRGCDLYKSATQTVFGSGPSRARVLFVGEQPGDREDIE 65

Query: 125 GKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIM---RQ 181
           G+PF G  G +LD  L    I R   +++         +      E    R        Q
Sbjct: 66  GEPFVGPAGGLLDLALAEAGIERDDAYLTNAVK-----HFKFVPQERGKRRIHRKPSTAQ 120

Query: 182 IELISP 187
           +    P
Sbjct: 121 MRACRP 126


>gi|254670986|emb|CBA07715.1| bacteriophage-related DNA polymerase [Neisseria meningitidis
           alpha153]
 gi|325143767|gb|EGC66084.1| putative uracil-DNA glycosylase, family 4 [Neisseria meningitidis
           M01-240013]
          Length = 245

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 51/269 (18%), Positives = 89/269 (33%), Gaps = 37/269 (13%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITN----- 55
           M S R L   + L +   +       V    N  AT    R +    + I+P        
Sbjct: 1   MLSARYLHLHEALGLGPMWLKQAA-AVLPPKNTPATPAQARPQTVRAAPIRPSQPHNGQA 59

Query: 56  ----IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLM 111
               ++ + +  V       +    L  L   +               + A       L 
Sbjct: 60  RLETMKALETAAVPTRKPAPETETPLPGLSDGIA-------------PVPAASGI-TKLA 105

Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEM 171
           ++   P   D + G+ F GK G +LD +L+++ +    +H +        GN   S   +
Sbjct: 106 VVSLCPPIEDAVYGQLFHGKAGVLLDNILKAVGLDAAYVHKTSWVKTAAVGNPMPSEQAV 165

Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231
                 I R+++      +LF+G      F   + Q   + L             P    
Sbjct: 166 ANALGQIARELDGCRAPAVLFLG----QAFVQPERQTMIETL---------CGSRPFFII 212

Query: 232 VHPQELIQYPLIKKNTWHALITLKKALKN 260
            HP  L++ P +K   W  L  LK+AL+ 
Sbjct: 213 DHPARLLRQPELKARAWQVLKQLKRALRQ 241


>gi|260662708|ref|ZP_05863602.1| uracil-DNA glycosylase superfamily protein [Lactobacillus fermentum
           28-3-CHN]
 gi|260552789|gb|EEX25788.1| uracil-DNA glycosylase superfamily protein [Lactobacillus fermentum
           28-3-CHN]
          Length = 220

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 66/191 (34%), Gaps = 30/191 (15%)

Query: 99  TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158
            +         +M++G  P  S+  S  PFSG +G  L K+L+ I + R  +HI+ +   
Sbjct: 25  FVPGAGPNHPAVMLVGEAPGRSETDSRVPFSGTSGKELIKLLEEIGLSRATVHITSVVRK 84

Query: 159 HPPG-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
            P                   NR  +  E+    P+   +++ ++P++++ +GN +    
Sbjct: 85  RPYSVKVVTDKKTGQRVTKYPNRTPTKKEVLAFGPLFDWELKAVAPQVIVPLGNTSLQRL 144

Query: 202 FNNDAQKTYQNLGKWS------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249
              +A K     G+                    +    +   HP   +    ++     
Sbjct: 145 LGPEA-KIGDLHGQVLHQSVLETRPDHQGYQMGTTPYYIVPMYHPAAFLYARRLEPTVRA 203

Query: 250 ALITLKKALKN 260
                 K LK 
Sbjct: 204 DWQAFGKWLKE 214


>gi|229058265|ref|ZP_04196653.1| Uracil-DNA glycosylase superfamily [Bacillus cereus AH603]
 gi|228720129|gb|EEL71713.1| Uracil-DNA glycosylase superfamily [Bacillus cereus AH603]
          Length = 216

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 64/186 (34%), Gaps = 30/186 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               +   LM++G  P +++  +G PFSG+ G  L + L+ I + R +++I+      P 
Sbjct: 29  GQGPKNPKLMLVGEAPGETEIHNGIPFSGRAGKHLMEFLERIHVTREEVYITSAVRSRPY 88

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E I   +++ +GN          
Sbjct: 89  KWREKRERNGEIIQKKYNRTPNQGEILAHAPLLDYELEFIQQPVIVTLGNIALQRLVG-K 147

Query: 206 AQKTYQNLGKW-------------SNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + +  +  L 
Sbjct: 148 NNKITDVHGELLKQPVQRLKDSSSIEFIWSEKEYNIFPTFHPASIFYNRSLLELIYEDLE 207

Query: 253 TLKKAL 258
            LK+ +
Sbjct: 208 KLKRFI 213


>gi|319796425|ref|YP_004158065.1| uraciL-DNA glycosylase superfamily [Variovorax paradoxus EPS]
 gi|315598888|gb|ADU39954.1| Uracil-DNA glycosylase superfamily [Variovorax paradoxus EPS]
          Length = 266

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 63/167 (37%), Gaps = 7/167 (4%)

Query: 90  CHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQ 149
           C L + +     +        +++   P ++D   G+PFSG  G +LD ML+++++   +
Sbjct: 99  CRLYADAAEAPAS---PQGGWLVVADMPPEADGRHGEPFSGDAGRLLDNMLRALKLHDGK 155

Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209
             + ++      G                      ++P ++L +G               
Sbjct: 156 TPVHLMRTHR--GVAAGQPGSPRQMDEAFAEHAAALAPSVVLAMGPLAAQSLMQ-SGDPL 212

Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
            +  G+   L + +  +P +AT HP  L++ P  K   W  L    +
Sbjct: 213 GKLRGRAVPLASIN-GVPVVATYHPAYLLRNPADKARAWADLCLAAE 258


>gi|261378205|ref|ZP_05982778.1| uracil-DNA glycosylase, family 4 [Neisseria cinerea ATCC 14685]
 gi|269145676|gb|EEZ72094.1| uracil-DNA glycosylase, family 4 [Neisseria cinerea ATCC 14685]
          Length = 246

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/270 (16%), Positives = 88/270 (32%), Gaps = 37/270 (13%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDE----------PNNEATYESQRKEKSIDSAI 50
           M S R L   + L +   +   G   +             P  +      ++     +  
Sbjct: 1   MLSARYLHLHEALGLGPMWLKRGAVVLPSATLPGSQTQIRPQKQTVLSIPQRPSEQHTGQ 60

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
             +  ++ + +  V     + +    L  +   +               + A       L
Sbjct: 61  ARLKTMKVLETTAVHTRKPVPETETPLSGVSDGIA-------------PVPAASGI-TKL 106

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170
            ++   P   D + G+ F GK G +LD +L+++ +    +H +        GN   S   
Sbjct: 107 AVVSLCPPTEDMVYGQLFHGKAGVLLDNILKAVGLDAAYVHKTSWVKTAAVGNPMPSEQA 166

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230
           +      I R+++      +LF+G      F   + Q   + L             P   
Sbjct: 167 IANALGQIARELDGCRAPAVLFLG----QAFVQPERQTMIETL---------CGSRPFFI 213

Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALKN 260
             HP  L++ P +K   W  L  LK+AL+ 
Sbjct: 214 IDHPARLLRQPELKARNWQVLKQLKRALQA 243


>gi|229132438|ref|ZP_04261292.1| Uracil-DNA glycosylase superfamily [Bacillus cereus BDRD-ST196]
 gi|228651144|gb|EEL07125.1| Uracil-DNA glycosylase superfamily [Bacillus cereus BDRD-ST196]
          Length = 216

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 64/186 (34%), Gaps = 30/186 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               +   LM++G  P +++  +G PFSG+ G  L + L+ I + R +++I+      P 
Sbjct: 29  GQGPKNPKLMLVGEAPGETEIHNGIPFSGRAGKHLMEFLERIHVTREEVYITSAVRSRPY 88

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E I   +++ +GN          
Sbjct: 89  KWREKRELNGEIIQKKYNRTPNQGEILAHAPLLDYELEFIQQPVIVTLGNIALQRLVG-K 147

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + +  +  L 
Sbjct: 148 NNKITDVHGELLKQPVQRLKDSSSTEFIWSEKEYHIFPTFHPASIFYNRSLLELIYEDLE 207

Query: 253 TLKKAL 258
            LK+ +
Sbjct: 208 KLKRFI 213


>gi|229010938|ref|ZP_04168134.1| Uracil-DNA glycosylase superfamily [Bacillus mycoides DSM 2048]
 gi|229166476|ref|ZP_04294232.1| Uracil-DNA glycosylase superfamily [Bacillus cereus AH621]
 gi|228617050|gb|EEK74119.1| Uracil-DNA glycosylase superfamily [Bacillus cereus AH621]
 gi|228750338|gb|EEM00168.1| Uracil-DNA glycosylase superfamily [Bacillus mycoides DSM 2048]
          Length = 216

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 64/186 (34%), Gaps = 30/186 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               +   LM++G  P +++  +G PFSG+ G  L + L+ I + R +++I+      P 
Sbjct: 29  GQGPKNPKLMLVGEAPGETEIHNGIPFSGRAGKHLMEFLERIHVTREEVYITSAVRSRPY 88

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E I   +++ +GN          
Sbjct: 89  KWREKRERNGEIIQKKYNRTPNQGEILAHAPLLDYELEFIQQPVIVTLGNIALQRLVG-K 147

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + +  +  L 
Sbjct: 148 NNKITDVHGELLKQPVQRLKDSSSTEFIWSEKEYHIFPTFHPASIFYNRSLLELIYEDLE 207

Query: 253 TLKKAL 258
            LK+ +
Sbjct: 208 KLKRFI 213


>gi|163939446|ref|YP_001644330.1| uracil-DNA glycosylase superfamily protein [Bacillus
           weihenstephanensis KBAB4]
 gi|163861643|gb|ABY42702.1| Uracil-DNA glycosylase superfamily [Bacillus weihenstephanensis
           KBAB4]
          Length = 216

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 64/186 (34%), Gaps = 30/186 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               +   LM++G  P +++  +G PFSG+ G  L + L+ I + R +++I+      P 
Sbjct: 29  GQGPKNPKLMLVGEAPGETEIHNGIPFSGRAGKHLMEFLERIHVTREEVYITSAVRSRPY 88

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E I   +++ +GN          
Sbjct: 89  KWREKRERNGEIIQKKYNRTPNQGEILAHAPLLDYELEFIQQPVIVTLGNIALQRLVG-K 147

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + +  +  L 
Sbjct: 148 NNKITDVHGELLKQPVQRLKDSSSTEFIWSEKEYHIFPTFHPASIFYNRSLLELIYEDLE 207

Query: 253 TLKKAL 258
            LK+ +
Sbjct: 208 KLKRFI 213


>gi|229115076|ref|ZP_04244486.1| Uracil-DNA glycosylase superfamily [Bacillus cereus Rock1-3]
 gi|228668216|gb|EEL23648.1| Uracil-DNA glycosylase superfamily [Bacillus cereus Rock1-3]
          Length = 213

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 62/185 (33%), Gaps = 30/185 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
                   +M++G  P +++  +G PFSG+ G  L + L+ I + R +++I+      P 
Sbjct: 26  GQGPGNPKIMLVGEAPGETEIHNGIPFSGRAGKHLMEFLERIHVTREEVYITSAVRSRPY 85

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E I P +++ +GN          
Sbjct: 86  KWREKKERNGEKIQKKYNRTPNQGEILAHAPLLDYELEHIDPPVIVTLGNIALQRLVG-K 144

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + +  +    
Sbjct: 145 NHKITDVHGELLKQPVQQLKDSCCTEFVWTEKEYSIFPTFHPASIFYNRSLLELIYEDWE 204

Query: 253 TLKKA 257
            LKK 
Sbjct: 205 KLKKY 209


>gi|229096120|ref|ZP_04227093.1| Uracil-DNA glycosylase superfamily [Bacillus cereus Rock3-29]
 gi|228687080|gb|EEL40985.1| Uracil-DNA glycosylase superfamily [Bacillus cereus Rock3-29]
          Length = 213

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 62/185 (33%), Gaps = 30/185 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
                   +M++G  P +++  +G PFSG+ G  L + L+ I + R +++I+      P 
Sbjct: 26  GQGPGNPKIMLVGEAPGETEIHNGIPFSGRAGKHLMEFLERIHVTREEVYITSAVRSRPY 85

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E I P +++ +GN          
Sbjct: 86  KWREKKERNGEKIQKKYNRTPNQGEILAHAPLLDYELEHIDPPVIVTLGNIALQRLVG-K 144

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + +  +    
Sbjct: 145 NHKITDVHGELLKQPVQQLKDSCCTEFVWTEKEYSIFPTFHPASIFYNRSLLELIYEDWE 204

Query: 253 TLKKA 257
            LK+ 
Sbjct: 205 KLKRY 209


>gi|229102232|ref|ZP_04232941.1| Uracil-DNA glycosylase superfamily [Bacillus cereus Rock3-28]
 gi|228681133|gb|EEL35301.1| Uracil-DNA glycosylase superfamily [Bacillus cereus Rock3-28]
          Length = 213

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 62/185 (33%), Gaps = 30/185 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
                   +M++G  P +++  +G PFSG+ G  L + L+ I + R +++I+      P 
Sbjct: 26  GQGPGNPKIMLVGEAPGETEIHNGIPFSGRAGKHLMEFLERIHVTREEVYITSAVRSRPY 85

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E I P +++ +GN          
Sbjct: 86  KWREKKERNGEKIQKKYNRTPNQGEILAHAPLLDYELEHIDPPVIVTLGNIALQRLVG-K 144

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + +  +    
Sbjct: 145 NHKITDVHGELLKQPVQQLKDSCCTEFVWTEKEYSIFPTFHPASIFYNRSLLELIYEDWE 204

Query: 253 TLKKA 257
            LK+ 
Sbjct: 205 KLKRY 209


>gi|327183800|gb|AEA32247.1| Uracil-DNA glycosylase family protein [Lactobacillus amylovorus GRL
           1118]
          Length = 215

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 60/189 (31%), Gaps = 31/189 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
            +  +   LMIIG  P  ++ ++  PFSG  G  L+K L  I + R  ++I+      P 
Sbjct: 26  GSGPKHPKLMIIGEAPGRNEIVNNIPFSGDAGKELNKSLAQIGLTRDDVYITSAVRSRPY 85

Query: 162 G-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204
                             NR  +  E+    P +  +I+   PK+++ +GN         
Sbjct: 86  AIKKVFSKRENKEVTKYPNRKPTKKEVLAHAPFLDYEIDYAQPKLIVALGNTGLERLLGP 145

Query: 205 DAQKTYQNLGKWSN-------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
              K  +  GK                              HP  +     +  +     
Sbjct: 146 -GHKISEEHGKVIENTPILRLNPQKDGYVWSKQKYTIFPEYHPAAVFYNRKLSDDIIKDW 204

Query: 252 ITLKKALKN 260
             +K  L+ 
Sbjct: 205 NIIKPYLEK 213


>gi|315038595|ref|YP_004032163.1| Uracil-DNA glycosylase family protein [Lactobacillus amylovorus GRL
           1112]
 gi|312276728|gb|ADQ59368.1| Uracil-DNA glycosylase family protein [Lactobacillus amylovorus GRL
           1112]
          Length = 215

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 60/189 (31%), Gaps = 31/189 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
            +  +   LMIIG  P  ++ ++  PFSG  G  L+K L  I + R  ++I+      P 
Sbjct: 26  GSGPKHPKLMIIGEAPGRNEIVNNIPFSGDAGKELNKSLAQIGLTRDDVYITSAVRSRPY 85

Query: 162 G-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204
                             NR  +  E+    P +  +I+   PK+++ +GN         
Sbjct: 86  AIKKVFSKRQNKEVTKYPNRKPTKKEVLAHAPFLDYEIDYAQPKLIVALGNTGLERLLGP 145

Query: 205 DAQKTYQNLGKWSN-------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
              K  +  GK                              HP  +     +  +     
Sbjct: 146 -GHKISEEHGKVIENTPILRLNPQKDGYVWSKQKYTIFPEYHPAAVFYNRKLSDDIIKDW 204

Query: 252 ITLKKALKN 260
             +K  L+ 
Sbjct: 205 NIIKPYLEK 213


>gi|261405902|ref|YP_003242143.1| uracil-DNA glycosylase superfamily protein [Paenibacillus sp.
           Y412MC10]
 gi|261282365|gb|ACX64336.1| Uracil-DNA glycosylase superfamily [Paenibacillus sp. Y412MC10]
          Length = 220

 Score = 91.0 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 63/208 (30%), Gaps = 32/208 (15%)

Query: 82  SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
           + +       +       +         +M IG  P   + + GKPF G+ G  ++  L+
Sbjct: 12  ATIAICRARLVHQPVEGFLLGRGVRFAKIMFIGEAPGAHEVLEGKPFVGQAGQEMNAYLE 71

Query: 142 SIEIMRTQIHISMISPWHPPG----------------NRNLSNIEMEICRPIIMRQIELI 185
            +++ R Q++I+      P                  NR  +  E+    P++  +I  +
Sbjct: 72  RLKLTRDQVYITSSMRSRPYKDKVLVRPSGENVISRSNRTPTKAEILAHAPLLDEEIRWV 131

Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN---------------LCTPHSIIPTLA 230
            P IL  +GN   +    +  +      GK                              
Sbjct: 132 RPDILAPMGNTALHRLIGSH-ETVTSLHGKLMEGPVQQAADPENPGAGYVFSPETYKIFP 190

Query: 231 TVHPQELIQYPLIKKNTWHALITLKKAL 258
             HP  ++    +       L  L + L
Sbjct: 191 LFHPAAVLYNRKLSTLIEDDLDILARIL 218


>gi|184156039|ref|YP_001844379.1| hypothetical protein LAF_1563 [Lactobacillus fermentum IFO 3956]
 gi|183227383|dbj|BAG27899.1| hypothetical phage protein [Lactobacillus fermentum IFO 3956]
          Length = 220

 Score = 91.0 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 66/191 (34%), Gaps = 30/191 (15%)

Query: 99  TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158
            +         +M++G  P  S+  S  PFSG +G  L K+L+ I + R  +HI+ +   
Sbjct: 25  FVPGAGPNHPAVMLVGEAPGRSETDSQVPFSGTSGKELIKLLEEIGLSRATVHITSVVCK 84

Query: 159 HPPG-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
            P                   NR  +  E+    P+   +++ ++P++++ +GN +    
Sbjct: 85  RPYSVKVVTNKKTGQRVTKYPNRTPTKKEVLAFGPLFDWELKTVAPQVVVPLGNTSLQRL 144

Query: 202 FNNDAQKTYQNLGKWS------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249
              +A K     G+                    +    +   HP   +    ++     
Sbjct: 145 LGPEA-KIGDLHGQVLHQSVLETRPDHQGYQMGTTPYYIVPMYHPAAFLYARRLEPTVRA 203

Query: 250 ALITLKKALKN 260
                 K LK 
Sbjct: 204 DWQAFGKWLKE 214


>gi|261207375|ref|ZP_05922062.1| uracil-DNA glycosylase superfamily [Enterococcus faecium TC 6]
 gi|289566789|ref|ZP_06447201.1| uracil-DNA glycosylase superfamily [Enterococcus faecium D344SRF]
 gi|294614742|ref|ZP_06694644.1| DNA polymerase [Enterococcus faecium E1636]
 gi|294619306|ref|ZP_06698775.1| DNA polymerase [Enterococcus faecium E1679]
 gi|260078435|gb|EEW66139.1| uracil-DNA glycosylase superfamily [Enterococcus faecium TC 6]
 gi|289161416|gb|EFD09304.1| uracil-DNA glycosylase superfamily [Enterococcus faecium D344SRF]
 gi|291592480|gb|EFF24087.1| DNA polymerase [Enterococcus faecium E1636]
 gi|291594466|gb|EFF25874.1| DNA polymerase [Enterococcus faecium E1679]
          Length = 213

 Score = 91.0 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 57/188 (30%), Gaps = 30/188 (15%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
                   LM++G  P  ++  +  PFSG+ G  L + L S  + R +++I+      P 
Sbjct: 26  GQGPLHPKLMLVGEAPGKTEIDTHVPFSGQAGKELMQALSSTGLTREEVYITSAIRSRPY 85

Query: 162 GNRN-----------------LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204
              +                  +  E+    PI+  +I+ + P+++  +GN         
Sbjct: 86  RVTHRINKRTKQQEIVYPNRTPTKAEVLAHAPILDYEIKQVQPQLIATLGNIGLQRLLG- 144

Query: 205 DAQKTYQNLGKWSN------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
                 +N G+                         L   HP  +     +         
Sbjct: 145 KEYTVTKNHGQLYTGPVLQLTEQKDAYEWSEKNYRILPLFHPAAIFYNRSLVPVIHQDWQ 204

Query: 253 TLKKALKN 260
            L   L+ 
Sbjct: 205 VLASLLQQ 212


>gi|94271666|ref|ZP_01291994.1| DNA polymerase bacteriophage-type [delta proteobacterium MLMS-1]
 gi|93450382|gb|EAT01594.1| DNA polymerase bacteriophage-type [delta proteobacterium MLMS-1]
          Length = 125

 Score = 91.0 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 5/127 (3%)

Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192
           G +LDKML +I + R+ ++++ +    PP  R  +  E   CRP ++ QI  I P +L  
Sbjct: 1   GALLDKMLAAIGLARSTVYLTTVVKCAPPDCRPPTPEESRQCRPWLLEQIAAIRPTLLCT 60

Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
           +G +       +      Q  G++ +       I  + T+ P  L+  P +KK  WH L 
Sbjct: 61  MGQEAAQSLLKSSRNL-LQLRGRFHD----CQGIALMPTLAPDFLLPNPEMKKAAWHDLQ 115

Query: 253 TLKKALK 259
            + K L 
Sbjct: 116 LIAKRLA 122


>gi|325127509|gb|EGC50436.1| putative uracil-DNA glycosylase, family 4 [Neisseria meningitidis
           N1568]
          Length = 245

 Score = 91.0 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 50/270 (18%), Positives = 93/270 (34%), Gaps = 39/270 (14%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNI---- 56
           M S R L   + L +   +       V   P N     +Q + +++ +A    +      
Sbjct: 1   MLSARYLHLHEALGLGPMWLKQ--TAVVLPPKNTPAPSAQARPQTVRAAPIRPSQPHNGQ 58

Query: 57  ------RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
                 + + +  V       +    L  L   +               + A       L
Sbjct: 59  ARLETMKALETAAVHTRKPAPETETPLPGLSDGIA-------------PVPAASGI-TKL 104

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170
            ++   P   D + G+ F GK G +LD +L+++ +    +H +        GN   S   
Sbjct: 105 AVVSLCPPIEDAVYGQLFHGKAGVLLDNILKAVGLDAAYVHKTCWVKTAAVGNPMPSEAA 164

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230
           +E     +M++++      +LF+G      F N + Q   + L             P   
Sbjct: 165 IETATVSVMQELDGCRAPAVLFLG----QAFVNPERQAMIETL---------CGSRPFFI 211

Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALKN 260
             HP  L++ P +K   W  L  LK+AL+ 
Sbjct: 212 IDHPARLLRQPELKARAWQVLKQLKRALRQ 241


>gi|228907261|ref|ZP_04071121.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis IBL 200]
 gi|228852401|gb|EEM97195.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis IBL 200]
          Length = 216

 Score = 91.0 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 66/184 (35%), Gaps = 30/184 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I + R +++I+      P 
Sbjct: 29  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 88

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E I+PK+++ +GN         +
Sbjct: 89  KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKINPKLIVTLGNIGLQRLIGKN 148

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                     +      T HP  +     + +  +  L 
Sbjct: 149 K-KITDVHGQLLKQPIQKLKDMQSAEFIWSENEYHVFPTFHPASIFYNRSLLELIYEDLE 207

Query: 253 TLKK 256
            LK+
Sbjct: 208 KLKR 211


>gi|329926821|ref|ZP_08281226.1| uracil-DNA glycosylase, family 4 [Paenibacillus sp. HGF5]
 gi|328938913|gb|EGG35284.1| uracil-DNA glycosylase, family 4 [Paenibacillus sp. HGF5]
          Length = 220

 Score = 91.0 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 63/208 (30%), Gaps = 32/208 (15%)

Query: 82  SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
           + +       +       +         +M IG  P   + + GKPF G+ G  ++  L+
Sbjct: 12  ATIAICRARLVHQPVEGFLLGRGVRFAKIMFIGEAPGAHEVLEGKPFVGQAGQEMNAYLE 71

Query: 142 SIEIMRTQIHISMISPWHPPG----------------NRNLSNIEMEICRPIIMRQIELI 185
            +++ R Q++I+      P                  NR  +  E+    P++  +I  +
Sbjct: 72  RLKLTRDQVYITSAMRSRPYKDKVLVRPSGENVISRSNRTPTKAEILAHAPLLDEEIRWV 131

Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN---------------LCTPHSIIPTLA 230
            P IL  +GN   +    +  +      GK                              
Sbjct: 132 RPDILAPMGNTALHRLIGSH-ETVTSLHGKLMEGPVQQAADPENPGAGYVFSPETYKIFP 190

Query: 231 TVHPQELIQYPLIKKNTWHALITLKKAL 258
             HP  ++    +       L  L + L
Sbjct: 191 LFHPAAVLYNRKLSTLIEDDLDILARIL 218


>gi|152975053|ref|YP_001374570.1| uracil-DNA glycosylase superfamily protein [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152023805|gb|ABS21575.1| Uracil-DNA glycosylase superfamily [Bacillus cytotoxicus NVH
           391-98]
          Length = 212

 Score = 91.0 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 63/186 (33%), Gaps = 30/186 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               +    M++G  P +++  +G PFSG+ G  L + L  + I R +++I+      P 
Sbjct: 26  GQGPKNPKFMLVGEAPGETEIHNGIPFSGRAGKYLMEFLNYLHITREEVYITSAVRSRPY 85

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E I P++++ +GN         D
Sbjct: 86  KWKEKKEKSGEVIQKKYNRTPNQREIVAHAPLLDYELEQIKPRMIVTLGNIGLQRLVGRD 145

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     GK                              HP  +     +    +  L 
Sbjct: 146 K-KITDVHGKLLKQSVRKLKDINSSEFIWTKKEYYIFPIFHPASIFYNRSLLDFIYEDLE 204

Query: 253 TLKKAL 258
            LK+ +
Sbjct: 205 KLKEYI 210


>gi|331700790|ref|YP_004397749.1| Uracil-DNA glycosylase superfamily [Lactobacillus buchneri NRRL
           B-30929]
 gi|329128133|gb|AEB72686.1| Uracil-DNA glycosylase superfamily [Lactobacillus buchneri NRRL
           B-30929]
          Length = 213

 Score = 90.6 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 62/182 (34%), Gaps = 21/182 (11%)

Query: 99  TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158
            + +       ++++G  P D +   G+PF G +G  LD+ L S+ + R  I+I+ +   
Sbjct: 28  FVPSEGGLHPRILLLGEAPGDKEVKIGRPFMGPSGKELDRWLASLGLTREDIYITGVVNS 87

Query: 159 HPP--------GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210
            P          +R  +  E++    +   ++      +L+ +GN +        A K  
Sbjct: 88  RPFSIGKTGRKSDRRPNQKEVKRSAAMFDWELSHFPDVLLVPMGNASLQRLLGTKA-KIG 146

Query: 211 QNLGKWSN------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
              G+                             HP    ++  +K         LK+ L
Sbjct: 147 DLHGQLLERSIQKYNQQTDSFELSKEKHQIFPLYHPSYSKRFKNMKPVVDADSQKLKQLL 206

Query: 259 KN 260
           + 
Sbjct: 207 EQ 208


>gi|309379489|emb|CBX21855.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 244

 Score = 90.6 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 52/269 (19%), Positives = 92/269 (34%), Gaps = 37/269 (13%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITN----- 55
           M S R L   + L +   +   G   V    N  AT    R +    + I+P        
Sbjct: 1   MLSARYLHLHEALGLGPMWLKRGA-VVLPPKNTPATSVQARPQTVRSAPIRPSQPHNVQA 59

Query: 56  ----IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLM 111
               ++ + +  V     + +    L  +   +               + A       L 
Sbjct: 60  RLETMKALETAAVPTRKPVPETETPLPGVSDGIA-------------PVPAASGI-TRLA 105

Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEM 171
           ++   P   D + G+ F GK G +LD +L+++ +    +H +        GN   S   +
Sbjct: 106 VVSLCPPIEDAVYGQLFHGKAGILLDNILKAVGLDAAYVHKTCWVKTAAVGNPMPSEQAI 165

Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231
           E     I+R+++      +LF+G      F   + Q   + L             P    
Sbjct: 166 ENALGQIIRELDGCRAPAVLFLG----QAFVQPERQAMIETL---------CGSRPFFII 212

Query: 232 VHPQELIQYPLIKKNTWHALITLKKALKN 260
            HP  L++ P +K   W  L  LK AL+ 
Sbjct: 213 DHPARLLRQPELKARAWQVLKQLKHALQA 241


>gi|87199797|ref|YP_497054.1| hypothetical protein Saro_1780 [Novosphingobium aromaticivorans DSM
           12444]
 gi|87135478|gb|ABD26220.1| hypothetical protein Saro_1780 [Novosphingobium aromaticivorans DSM
           12444]
          Length = 258

 Score = 90.6 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 88/241 (36%), Gaps = 9/241 (3%)

Query: 10  EQILTIALFYADSGVY-WVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQAD 68
           + +     ++ D+GV     DEP +              +  +P+  +            
Sbjct: 14  DALAAALDWWRDAGVDGTFVDEPQDWLAAARLAAAAQAPTPQKPLRELIAERDDSPP-PP 72

Query: 69  SIAQKACSLHELKSLLRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127
           +++ ++    EL +    +     L    L  +      G  LMI+   PS  D  +   
Sbjct: 73  TVSDRSGWPTELAAFADWWLAEPVLAPAGLRRLVPAGPAGAKLMIVVPMPSADDGDT--L 130

Query: 128 FSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP 187
            SG+ G +LD ML ++ + R + +I+   P H P     + +       +++  I L++P
Sbjct: 131 LSGRAGRLLDAMLAAMGLERGETYIASAIPAHVPMPD-WAALRQAGIGDVLLHHIALVAP 189

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247
             LL +G  + +    ND             +    S+I  L     + ++  P +K   
Sbjct: 190 DRLLILGATSISTLLGNDPPNLAH---SLQAINQNPSVIAALPAWDLEAMLARPALKAGF 246

Query: 248 W 248
           W
Sbjct: 247 W 247


>gi|261364810|ref|ZP_05977693.1| uracil-DNA glycosylase, family 4 [Neisseria mucosa ATCC 25996]
 gi|288566841|gb|EFC88401.1| uracil-DNA glycosylase, family 4 [Neisseria mucosa ATCC 25996]
          Length = 279

 Score = 90.6 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 77/220 (35%), Gaps = 21/220 (9%)

Query: 39  SQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLS 98
            +R+  S  +A                 AD   +   +  +L +      D    S ++ 
Sbjct: 81  PEREMPSQQTAAVEAARQSEAKPKQETPADKQTRSIQNTADLPAAPHHSDDLPRLSATVK 140

Query: 99  TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158
           T          LM++   PS  D + G+ F G+TG +LD ML +I +   Q H +     
Sbjct: 141 TAH--------LMVVSICPSTEDTLHGELFHGETGVLLDNMLAAIRLSPQQAHKTSWVKA 192

Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218
            P  + + S  ++    P +  ++E    + +LF+G   +            +  G    
Sbjct: 193 APVFSPHPSEAQIHAELPALKHELESSQARAVLFLGQVFEQ---KEMMAVMDELCG---- 245

Query: 219 LCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
                  IP     HP  L++ P +K   W  L      L
Sbjct: 246 ------GIPYFTIPHPARLLRQPRLKAYAWQVLKKAAAVL 279


>gi|308389972|gb|ADO32292.1| putative DNA polymerase [Neisseria meningitidis alpha710]
          Length = 245

 Score = 90.6 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 50/269 (18%), Positives = 89/269 (33%), Gaps = 37/269 (13%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITN----- 55
           M S R L   + L +   +       V    N  AT    R +    + I+P        
Sbjct: 1   MLSARYLHLHEALGLGPMWLKQAA-AVLPPKNTPATPAQARPQTVRAAPIRPSQPHNGQA 59

Query: 56  ----IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLM 111
               ++ + +  V       +    L  L   +               + A       L 
Sbjct: 60  RLETMKALETAAVPTRKPAPETETPLPGLSDGIA-------------PVPAASGI-TKLA 105

Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEM 171
           ++   P   D + G+ F GK G +LD +L+++ +    +H +        G+   S   +
Sbjct: 106 VVSLCPPIEDAVYGQLFHGKAGVLLDNILKAVGLDAAYVHKTCWVKTAAVGSPMPSEQAI 165

Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231
                 I R+++      +LF+G      F   + Q   + L             P    
Sbjct: 166 ANALGQIARELDGCCAPAVLFLG----QAFVQPERQAMIETL---------CGSRPFFII 212

Query: 232 VHPQELIQYPLIKKNTWHALITLKKALKN 260
            HP  L++ P +K   W  L  LK+AL+ 
Sbjct: 213 DHPARLLRQPELKARAWQVLKQLKRALRQ 241


>gi|55379276|ref|YP_137126.1| uracil DNA glycosylase superfamily protein [Haloarcula marismortui
           ATCC 43049]
 gi|55232001|gb|AAV47420.1| uracil DNA glycosylase superfamily protein [Haloarcula marismortui
           ATCC 43049]
          Length = 239

 Score = 90.6 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 61/164 (37%), Gaps = 12/164 (7%)

Query: 85  RSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTP----SDSDNISGKPFSG------KTG 133
                C  L  +             DL+++G  P    S++++  G   +G      ++G
Sbjct: 47  ADCRRCPELAESRTCISWGNGPLDADLVVVGEAPAEGDSEAEHWQGGNLTGMAYTSRRSG 106

Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
             +  +L          + +     HPPGNR+ ++ E+  CRP ++ ++E I P  ++  
Sbjct: 107 RKVRDLLTDAGFSHDDCYYTNAVKCHPPGNRDPTDAELANCRPYLVEEVEAIEPTAVVAT 166

Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSN-LCTPHSIIPTLATVHPQE 236
           G          D +     L    +   +    +P +  +HP  
Sbjct: 167 GKHATKTVLALDGESLDGFLDSVLDPRRSEALGVPVVPLLHPSY 210


>gi|228964603|ref|ZP_04125711.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228795034|gb|EEM42532.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar
           sotto str. T04001]
          Length = 213

 Score = 90.6 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 66/184 (35%), Gaps = 30/184 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I + R +++I+      P 
Sbjct: 26  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 85

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E I+PK+++ +GN         +
Sbjct: 86  KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKINPKLIVTLGNIGLQRLTGKN 145

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                     +      T HP  +     + +  +  L 
Sbjct: 146 K-KITDVHGQLLKQPIQKLKDVQSAEFIWSENEYHVFPTFHPASIFYNRSLLELIYEDLE 204

Query: 253 TLKK 256
            LK+
Sbjct: 205 KLKR 208


>gi|75761444|ref|ZP_00741412.1| Uracil DNA glycosylase superfamily protein [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|218896558|ref|YP_002444969.1| uracil-DNA glycosylase family protein [Bacillus cereus G9842]
 gi|228900209|ref|ZP_04064440.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis IBL
           4222]
 gi|74491078|gb|EAO54326.1| Uracil DNA glycosylase superfamily protein [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|218543356|gb|ACK95750.1| uracil-DNA glycosylase family protein [Bacillus cereus G9842]
 gi|228859378|gb|EEN03807.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis IBL
           4222]
          Length = 213

 Score = 90.6 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 66/184 (35%), Gaps = 30/184 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I + R +++I+      P 
Sbjct: 26  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 85

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E I+PK+++ +GN         +
Sbjct: 86  KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKINPKLIVTLGNIGLQRLTGKN 145

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                     +      T HP  +     + +  +  L 
Sbjct: 146 K-KITDVHGQLLKQPIQKLKDMQSAEFIWSENEYHVFPTFHPASIFYNRSLLELIYEDLE 204

Query: 253 TLKK 256
            LK+
Sbjct: 205 KLKR 208


>gi|156740270|ref|YP_001430399.1| uracil-DNA glycosylase superfamily protein [Roseiflexus
           castenholzii DSM 13941]
 gi|156231598|gb|ABU56381.1| Uracil-DNA glycosylase superfamily [Roseiflexus castenholzii DSM
           13941]
          Length = 192

 Score = 90.2 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 64/165 (38%), Gaps = 10/165 (6%)

Query: 85  RSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKMLQ 141
           ++   C  L ++    +         ++ IG  P     + +G PF G ++G ML ++L 
Sbjct: 8   QNCRSCPALVASRRRIVHGYGDTASGIVFIGEAPGRHGADQTGIPFWGDRSGRMLRRILV 67

Query: 142 SIEIMRT-------QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
            + +          +  I+ +    PPGNR  +  E+  CR  +  ++++I P++++ +G
Sbjct: 68  QVGLASDETAGATLRCFITNVVRCCPPGNRTPTPAEVRACRTWLWMELDMIKPRLIIPVG 127

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
                       +     +            +  L  +HP  + +
Sbjct: 128 RIALQEVGMRYLKHDPGAIRSVHATVLRSRHVTILPLIHPARISR 172


>gi|257885086|ref|ZP_05664739.1| uracil-DNA glycosylase [Enterococcus faecium 1,231,501]
 gi|257820938|gb|EEV48072.1| uracil-DNA glycosylase [Enterococcus faecium 1,231,501]
          Length = 213

 Score = 90.2 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 57/188 (30%), Gaps = 30/188 (15%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
                   LM++G  P  ++  +  PFSG+ G  L + L S  + R +++I+      P 
Sbjct: 26  GQGPLHPKLMLVGEAPGKTEIDTHVPFSGQAGKELMQALSSTGLTREEVYITSAVRSRPY 85

Query: 162 GNRN-----------------LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204
              +                  +  E+    PI+  +I+ + P+++  +GN         
Sbjct: 86  RVTHRINKRTKQQEIVYPNRTPTKAEVLAHAPILDYEIKQVQPQLIATLGNIGLQRLLG- 144

Query: 205 DAQKTYQNLGKWS------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
                 +N G+                         L   HP  +     +         
Sbjct: 145 KEYTVTKNHGQLYAGPVLQLTEQKDAYEWSEKNYRILPLFHPAAIFYNRSLVPVIHQDWQ 204

Query: 253 TLKKALKN 260
            L   L+ 
Sbjct: 205 VLASLLQQ 212


>gi|229084635|ref|ZP_04216903.1| Uracil-DNA glycosylase superfamily [Bacillus cereus Rock3-44]
 gi|228698658|gb|EEL51375.1| Uracil-DNA glycosylase superfamily [Bacillus cereus Rock3-44]
          Length = 215

 Score = 90.2 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 67/187 (35%), Gaps = 30/187 (16%)

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160
           C    +   LM++G  P +++  +G PFSG+ G  L   L+ I + R +++I+      P
Sbjct: 30  CGQGPKKSKLMLVGEAPGETEIHNGIPFSGRAGKELMGFLERIGLTREEVYITSAVRSRP 89

Query: 161 PG----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204
                             NR  +  E+ +  P++  ++E +   +++ +GN         
Sbjct: 90  YKWREKRERSGQVVQKKYNRTPNQREILVHAPLLDYEMEHVQAPVIVTLGNIALKRLVGP 149

Query: 205 DAQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
           +  K     G+               +      +     T HP  +     +    +  L
Sbjct: 150 NK-KITDVHGQLLQQPIQRLKNNQSTDFIWTEKVFNIFPTFHPASIFYNRSLLDLIYEDL 208

Query: 252 ITLKKAL 258
             L++ +
Sbjct: 209 EKLREYI 215


>gi|52143818|ref|YP_083009.1| uracil-DNA glycosylase family protein; DNA polymerase [Bacillus
           cereus E33L]
 gi|51977287|gb|AAU18837.1| uracil-DNA glycosylase family protein; possible DNA polymerase,
           bacteriophage-type [Bacillus cereus E33L]
          Length = 213

 Score = 90.2 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 65/185 (35%), Gaps = 30/185 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I + R +++I+      P 
Sbjct: 26  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 85

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E ++PK+++ +GN          
Sbjct: 86  KWREKKERNGSIIQKKYNRTPNQGEIVAHAPLLDYELEKLNPKLIVTLGNIGLQRLTG-K 144

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
            +K     G+                            T HP  +     + +  +  L 
Sbjct: 145 GKKITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYHIFPTFHPASIFYNRSLLELIYEDLE 204

Query: 253 TLKKA 257
            LK+ 
Sbjct: 205 KLKQY 209


>gi|228984708|ref|ZP_04144880.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228774906|gb|EEM23300.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 216

 Score = 90.2 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 30/185 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I + R +++I+      P 
Sbjct: 29  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 88

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E I+PK+++ +GN         D
Sbjct: 89  KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKINPKLIVTLGNIGLQRLAGKD 148

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + +  +  L 
Sbjct: 149 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYHIFPTFHPASIFYNRSLLELIYEDLE 207

Query: 253 TLKKA 257
            LK+ 
Sbjct: 208 KLKRY 212


>gi|196046576|ref|ZP_03113800.1| uracil-DNA glycosylase family protein [Bacillus cereus 03BB108]
 gi|225863492|ref|YP_002748870.1| uracil-DNA glycosylase family protein [Bacillus cereus 03BB102]
 gi|300117443|ref|ZP_07055233.1| uracil-DNA glycosylase family protein [Bacillus cereus SJ1]
 gi|196022509|gb|EDX61192.1| uracil-DNA glycosylase family protein [Bacillus cereus 03BB108]
 gi|225787020|gb|ACO27237.1| uracil-DNA glycosylase family protein [Bacillus cereus 03BB102]
 gi|298725278|gb|EFI65930.1| uracil-DNA glycosylase family protein [Bacillus cereus SJ1]
          Length = 213

 Score = 90.2 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 65/185 (35%), Gaps = 30/185 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I + R +++I+      P 
Sbjct: 26  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 85

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E ++PK+++ +GN         D
Sbjct: 86  KWREKKERNGSIIQKKYNRTPNQGEIVAHAPLLDYELEKLNPKLIVTLGNIGLQRLTGKD 145

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + +  +  L 
Sbjct: 146 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYHIFPTFHPASIFYNRSLLELIYEDLE 204

Query: 253 TLKKA 257
            LK+ 
Sbjct: 205 KLKQY 209


>gi|118477082|ref|YP_894233.1| uracil-DNA glycosylase family protein [Bacillus thuringiensis str.
           Al Hakam]
 gi|229183823|ref|ZP_04311040.1| Uracil-DNA glycosylase superfamily [Bacillus cereus BGSC 6E1]
 gi|118416307|gb|ABK84726.1| uracil-DNA glycosylase family protein [Bacillus thuringiensis str.
           Al Hakam]
 gi|228599672|gb|EEK57275.1| Uracil-DNA glycosylase superfamily [Bacillus cereus BGSC 6E1]
          Length = 216

 Score = 90.2 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 65/185 (35%), Gaps = 30/185 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I + R +++I+      P 
Sbjct: 29  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 88

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E ++PK+++ +GN         D
Sbjct: 89  KWREKKERNGSIIQKKYNRTPNQGEIVAHAPLLDYELEKLNPKLIVTLGNIGLQRLTGKD 148

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + +  +  L 
Sbjct: 149 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYHIFPTFHPASIFYNRSLLELIYEDLE 207

Query: 253 TLKKA 257
            LK+ 
Sbjct: 208 KLKQY 212


>gi|228945228|ref|ZP_04107584.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228814463|gb|EEM60728.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
          Length = 216

 Score = 90.2 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 65/185 (35%), Gaps = 30/185 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I + R +++I+      P 
Sbjct: 29  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 88

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E ++PK+++ +GN         D
Sbjct: 89  KWREKKERNGSIIQKKYNRTPNQGEIVAHAPLLDYELEKLNPKLIVTLGNIGLQRLTGKD 148

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + +  +  L 
Sbjct: 149 K-KITDVHGQLLKQPIQKLKDMQSAEFIWSEKEYHIFPTFHPASIFYNRSLLELIYEDLE 207

Query: 253 TLKKA 257
            LK+ 
Sbjct: 208 KLKQY 212


>gi|228926659|ref|ZP_04089728.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228932917|ref|ZP_04095782.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|229090591|ref|ZP_04221825.1| Uracil-DNA glycosylase superfamily [Bacillus cereus Rock3-42]
 gi|229121171|ref|ZP_04250408.1| Uracil-DNA glycosylase superfamily [Bacillus cereus 95/8201]
 gi|228662290|gb|EEL17893.1| Uracil-DNA glycosylase superfamily [Bacillus cereus 95/8201]
 gi|228692734|gb|EEL46459.1| Uracil-DNA glycosylase superfamily [Bacillus cereus Rock3-42]
 gi|228826720|gb|EEM72489.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228833035|gb|EEM78603.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 216

 Score = 90.2 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 65/185 (35%), Gaps = 30/185 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I + R +++I+      P 
Sbjct: 29  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 88

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E ++PK+++ +GN         D
Sbjct: 89  KWREKKERNGSIIQKKYNRTPNQGEIVAHAPLLDYELEKLNPKLIVTLGNIGLQRLTGKD 148

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + +  +  L 
Sbjct: 149 K-KITDVHGQLLKQPIQKLKDMQSAEFIWSEKEYHIFPTFHPASIFYNRSLLELIYEDLE 207

Query: 253 TLKKA 257
            LK+ 
Sbjct: 208 KLKQY 212


>gi|196033461|ref|ZP_03100873.1| uracil-DNA glycosylase family protein [Bacillus cereus W]
 gi|196038946|ref|ZP_03106253.1| uracil-DNA glycosylase family protein [Bacillus cereus NVH0597-99]
 gi|218902740|ref|YP_002450574.1| uracil-DNA glycosylase family protein [Bacillus cereus AH820]
 gi|195993895|gb|EDX57851.1| uracil-DNA glycosylase family protein [Bacillus cereus W]
 gi|196030091|gb|EDX68691.1| uracil-DNA glycosylase family protein [Bacillus cereus NVH0597-99]
 gi|218537932|gb|ACK90330.1| uracil-DNA glycosylase family protein [Bacillus cereus AH820]
          Length = 213

 Score = 90.2 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 65/185 (35%), Gaps = 30/185 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I + R +++I+      P 
Sbjct: 26  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 85

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E ++PK+++ +GN         D
Sbjct: 86  KWREKKERNGSIIQKKYNRTPNQGEIVAHAPLLDYELEKLNPKLIVTLGNIGLQRLTGKD 145

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + +  +  L 
Sbjct: 146 K-KITDVHGQLLKQPIQKLKDMQSAEFIWSEKEYHIFPTFHPASIFYNRSLLELIYEDLE 204

Query: 253 TLKKA 257
            LK+ 
Sbjct: 205 KLKQY 209


>gi|49481003|ref|YP_035745.1| uracil-DNA glycosylase family protein; DNA polymerase [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|49332559|gb|AAT63205.1| uracil-DNA glycosylase family protein; possible DNA polymerase,
           bacteriophage-type [Bacillus thuringiensis serovar
           konkukian str. 97-27]
          Length = 213

 Score = 90.2 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 65/185 (35%), Gaps = 30/185 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I + R +++I+      P 
Sbjct: 26  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 85

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E ++PK+++ +GN         D
Sbjct: 86  KWREKKERNGSIIQKKYNRTPNQGEIVAHAPLLDYELEKLNPKLIVTLGNIGLQRLTGKD 145

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + +  +  L 
Sbjct: 146 K-KITDVHGQLLKQPIQKLKDMQSAEFIWSEKEYHIFPTFHPASIFYNRSLLELIYEDLE 204

Query: 253 TLKKA 257
            LK+ 
Sbjct: 205 KLKQY 209


>gi|30261625|ref|NP_844002.1| uracil-DNA glycosylase family protein [Bacillus anthracis str.
           Ames]
 gi|47526825|ref|YP_018174.1| uracil-DNA glycosylase family protein [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49184456|ref|YP_027708.1| uracil-DNA glycosylase family protein [Bacillus anthracis str.
           Sterne]
 gi|165869510|ref|ZP_02214169.1| uracil-DNA glycosylase family protein [Bacillus anthracis str.
           A0488]
 gi|167633289|ref|ZP_02391614.1| uracil-DNA glycosylase family protein [Bacillus anthracis str.
           A0442]
 gi|167639122|ref|ZP_02397395.1| uracil-DNA glycosylase family protein [Bacillus anthracis str.
           A0193]
 gi|170686303|ref|ZP_02877525.1| uracil-DNA glycosylase family protein [Bacillus anthracis str.
           A0465]
 gi|170706519|ref|ZP_02896979.1| uracil-DNA glycosylase family protein [Bacillus anthracis str.
           A0389]
 gi|177650528|ref|ZP_02933495.1| uracil-DNA glycosylase family protein [Bacillus anthracis str.
           A0174]
 gi|190568667|ref|ZP_03021572.1| uracil-DNA glycosylase family protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|227815624|ref|YP_002815633.1| uracil-DNA glycosylase family protein [Bacillus anthracis str. CDC
           684]
 gi|229602003|ref|YP_002866032.1| uracil-DNA glycosylase family protein [Bacillus anthracis str.
           A0248]
 gi|254683116|ref|ZP_05146977.1| uracil-DNA glycosylase family protein [Bacillus anthracis str.
           CNEVA-9066]
 gi|254723704|ref|ZP_05185490.1| uracil-DNA glycosylase family protein [Bacillus anthracis str.
           A1055]
 gi|254734465|ref|ZP_05192177.1| uracil-DNA glycosylase family protein [Bacillus anthracis str.
           Western North America USA6153]
 gi|254740876|ref|ZP_05198564.1| uracil-DNA glycosylase family protein [Bacillus anthracis str.
           Kruger B]
 gi|254755114|ref|ZP_05207148.1| uracil-DNA glycosylase family protein [Bacillus anthracis str.
           Vollum]
 gi|254759651|ref|ZP_05211675.1| uracil-DNA glycosylase family protein [Bacillus anthracis str.
           Australia 94]
 gi|30255853|gb|AAP25488.1| uracil-DNA glycosylase family protein [Bacillus anthracis str.
           Ames]
 gi|47501973|gb|AAT30649.1| uracil-DNA glycosylase family protein [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49178383|gb|AAT53759.1| uracil-DNA glycosylase family protein [Bacillus anthracis str.
           Sterne]
 gi|164714950|gb|EDR20468.1| uracil-DNA glycosylase family protein [Bacillus anthracis str.
           A0488]
 gi|167512912|gb|EDR88285.1| uracil-DNA glycosylase family protein [Bacillus anthracis str.
           A0193]
 gi|167531327|gb|EDR94005.1| uracil-DNA glycosylase family protein [Bacillus anthracis str.
           A0442]
 gi|170128617|gb|EDS97484.1| uracil-DNA glycosylase family protein [Bacillus anthracis str.
           A0389]
 gi|170670000|gb|EDT20741.1| uracil-DNA glycosylase family protein [Bacillus anthracis str.
           A0465]
 gi|172083672|gb|EDT68732.1| uracil-DNA glycosylase family protein [Bacillus anthracis str.
           A0174]
 gi|190560267|gb|EDV14247.1| uracil-DNA glycosylase family protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|227003318|gb|ACP13061.1| uracil-DNA glycosylase family protein [Bacillus anthracis str. CDC
           684]
 gi|229266411|gb|ACQ48048.1| uracil-DNA glycosylase family protein [Bacillus anthracis str.
           A0248]
          Length = 213

 Score = 90.2 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 65/185 (35%), Gaps = 30/185 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I + R +++I+      P 
Sbjct: 26  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 85

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E ++PK+++ +GN         D
Sbjct: 86  KWREKKERSGSIIQKKYNRTPNQGEIVAHAPLLDYELEKLNPKLIVTLGNIGLQRLTGKD 145

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + +  +  L 
Sbjct: 146 K-KITDVHGQLLKQPIQKLKDMQSAEFIWSEKEYHIFPTFHPASIFYNRSLLELIYEDLE 204

Query: 253 TLKKA 257
            LK+ 
Sbjct: 205 KLKQY 209


>gi|65318894|ref|ZP_00391853.1| COG1573: Uracil-DNA glycosylase [Bacillus anthracis str. A2012]
 gi|228914204|ref|ZP_04077820.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228845408|gb|EEM90443.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 216

 Score = 90.2 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 65/185 (35%), Gaps = 30/185 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I + R +++I+      P 
Sbjct: 29  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 88

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E ++PK+++ +GN         D
Sbjct: 89  KWREKKERSGSIIQKKYNRTPNQGEIVAHAPLLDYELEKLNPKLIVTLGNIGLQRLTGKD 148

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + +  +  L 
Sbjct: 149 K-KITDVHGQLLKQPIQKLKDMQSAEFIWSEKEYHIFPTFHPASIFYNRSLLELIYEDLE 207

Query: 253 TLKKA 257
            LK+ 
Sbjct: 208 KLKQY 212


>gi|161869342|ref|YP_001598509.1| DNA polymerase, putative [Neisseria meningitidis 053442]
 gi|161594895|gb|ABX72555.1| DNA polymerase, bacteriophage-type, putative [Neisseria
           meningitidis 053442]
          Length = 246

 Score = 90.2 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 46/270 (17%), Positives = 90/270 (33%), Gaps = 37/270 (13%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDE----------PNNEATYESQRKEKSIDSAI 50
           M S R L   + L +   +   G   +             P  +      ++     +  
Sbjct: 1   MLSARYLHLHEALGLGPMWLKRGAVVLPPATLPESPTQIRPQKQTILSIPQRPSEQHTGQ 60

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
             +  ++ + +  V     + +    L  +   +               + A       L
Sbjct: 61  ARLKTMKALETAAVPTRKPVPETETPLPGVSDGIA-------------PVPAASGI-TRL 106

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170
            ++   P   D + G+ F GK G +LD +L+++ +    +H +        GN   S   
Sbjct: 107 AVVSLCPPIEDAVYGQLFHGKAGILLDNILKAVGLDAAYVHKTCWVKTAAVGNPMPSEQA 166

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230
           +E     I+R+++      +LF+G      F   + Q   + L             P   
Sbjct: 167 IENALGQIIRELDGCRAPAVLFLG----QAFVKPERQTMIETL---------CGCRPFFI 213

Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALKN 260
             HP  L++ P +K   W  L  LK+AL+ 
Sbjct: 214 IDHPARLLRQPELKARNWQVLKQLKRALQA 243


>gi|290242944|ref|YP_003494614.1| Uracil-DNA glycosylase superfamily [Thioalkalivibrio sp. K90mix]
 gi|288945449|gb|ADC73147.1| Uracil-DNA glycosylase superfamily [Thioalkalivibrio sp. K90mix]
          Length = 205

 Score = 90.2 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 60/162 (37%), Gaps = 15/162 (9%)

Query: 86  SFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI-E 144
               C L  T+   +         ++ +G  P   ++  G  F G  G  L++ ++++  
Sbjct: 5   DCQRCRLHETAEQVVNPDGARHS-ILAVGEGPGAIEDDYGVGFVGTAGQTLEREIRAVAG 63

Query: 145 IMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204
           + R Q   + I    PP NR     E+  C   +   I+ ++P+++L +G        N 
Sbjct: 64  LGRQQWARANIVRCRPPDNRKPRTDEVSACAGWLDAAIDGMAPRVILAVGESAGRKLANA 123

Query: 205 DAQKTYQNLGKWSNLCTP-------------HSIIPTLATVH 233
             +K    LG+   L +              +  +P +   H
Sbjct: 124 RIRKGTAYLGQVHQLLSGLNPDAGFIRHLPHYRQVPVVPMPH 165


>gi|224369852|ref|YP_002604016.1| predicted phage SPO1 DNA polymerase-related protein
           [Desulfobacterium autotrophicum HRM2]
 gi|223692569|gb|ACN15852.1| predicted phage SPO1 DNA polymerase-related protein
           [Desulfobacterium autotrophicum HRM2]
          Length = 209

 Score = 90.2 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 61/157 (38%), Gaps = 19/157 (12%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
                  +L I+             P++G  G +  K+L +I++ R +++I+ +      
Sbjct: 70  GEGDPNAELFIVTEQ----SQRGVSPYAGDAGELFLKILGAIDLTREKVYITAL------ 119

Query: 162 GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221
                ++  M      I R+I  ++P ++  +G +      +       +  G++ +   
Sbjct: 120 ----PASGPMTGALERIKREINRVNPTVICTLGGRAAQAMLDRRDPLQ-ELRGRFHDFN- 173

Query: 222 PHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
               IP + T HP+ LI     K+  W  +  +K  L
Sbjct: 174 ---TIPLMPTFHPKTLIHDVARKRPVWEDMKMIKARL 207


>gi|218234014|ref|YP_002366310.1| uracil-DNA glycosylase family protein [Bacillus cereus B4264]
 gi|218161971|gb|ACK61963.1| uracil-DNA glycosylase family protein [Bacillus cereus B4264]
          Length = 213

 Score = 89.8 bits (221), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 62/184 (33%), Gaps = 30/184 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I + R +++I+      P 
Sbjct: 26  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMVFLERIHVTREEVYITSAVRSRPY 85

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E I PK+++ +GN         +
Sbjct: 86  KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKIHPKLIVTLGNIGLQRLTGKN 145

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + K       
Sbjct: 146 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYHVFPTFHPASIFYNRSLLKLIHEDFE 204

Query: 253 TLKK 256
            LK+
Sbjct: 205 KLKR 208


>gi|47565992|ref|ZP_00237030.1| phage SPO1 DNA polymerase-related protein, putative [Bacillus
           cereus G9241]
 gi|47556909|gb|EAL15239.1| phage SPO1 DNA polymerase-related protein, putative [Bacillus
           cereus G9241]
          Length = 213

 Score = 89.8 bits (221), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 30/185 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I + R +++I+      P 
Sbjct: 26  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMSFLERIHVTREEVYITSAVRSRPY 85

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E I+PK+++ +GN         D
Sbjct: 86  KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKINPKLIVTLGNIGLQRLAGKD 145

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + +  +  L 
Sbjct: 146 K-KITDVHGQLLKQPIQKLKDMQSAEFTWAEKEYHIFPTFHPASIFYNRSLLELIYEDLE 204

Query: 253 TLKKA 257
            LK+ 
Sbjct: 205 KLKRY 209


>gi|325569700|ref|ZP_08145747.1| uracil-DNA glycosylase [Enterococcus casseliflavus ATCC 12755]
 gi|325157256|gb|EGC69421.1| uracil-DNA glycosylase [Enterococcus casseliflavus ATCC 12755]
          Length = 222

 Score = 89.8 bits (221), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 56/191 (29%), Gaps = 28/191 (14%)

Query: 99  TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158
            +         LMI+G  P  ++  +  PFSG+ G  L K L    + R  ++I+     
Sbjct: 28  FVPGQGPLQPKLMIVGEAPGRTEIENFIPFSGQAGKELMKSLALAGLTREDVYITSAVRS 87

Query: 159 HP-----------------PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
            P                   NR  +  E+ +  P++  ++ ++ P ++  +GN      
Sbjct: 88  RPYSVKERINKRSGAHEIVHPNRTPTKKEVLLHAPLLDYELSIVDPPVIATVGNIGLQRL 147

Query: 202 FNNDAQKTYQ----NLGKWSN-------LCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
             N              K                    +   HP  +     +       
Sbjct: 148 LGNAYYIKDHHGEVIRSKIQESNPTKDGYQWSEKEYLIVPMYHPAAIFYNRTLTPQIEAD 207

Query: 251 LITLKKALKNL 261
              L+  L  +
Sbjct: 208 WRGLRNILSQI 218


>gi|229172266|ref|ZP_04299830.1| Uracil-DNA glycosylase superfamily [Bacillus cereus MM3]
 gi|228611254|gb|EEK68512.1| Uracil-DNA glycosylase superfamily [Bacillus cereus MM3]
          Length = 216

 Score = 89.8 bits (221), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 66/185 (35%), Gaps = 30/185 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I++ R +++I+      P 
Sbjct: 29  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMDFLERIQVKREEVYITSAVRSRPY 88

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E I+PK+++ +GN         +
Sbjct: 89  KWREKKERNGEMIQKKYNRTPNQGEILAHAPLLDYELENINPKLIVTLGNIGLQRLTGKN 148

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + +  +  L 
Sbjct: 149 K-KITDVHGQLLIQPIQKLKDMQSAEFTWSEKEYHIFPTFHPASIFYNRSLLEFIYEDLE 207

Query: 253 TLKKA 257
            LKK 
Sbjct: 208 KLKKY 212


>gi|325129528|gb|EGC52355.1| putative uracil-DNA glycosylase, family 4 [Neisseria meningitidis
           OX99.30304]
 gi|325135468|gb|EGC58086.1| putative uracil-DNA glycosylase, family 4 [Neisseria meningitidis
           M0579]
          Length = 245

 Score = 89.8 bits (221), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 52/268 (19%), Positives = 93/268 (34%), Gaps = 35/268 (13%)

Query: 1   MTSKRILSQEQILTIALFYAD--SGVYWVFDEPNNEATYESQRKEKSIDSAIQP------ 52
           M S R L   + L +   +    + V    + P   A    Q    ++    QP      
Sbjct: 1   MLSARYLHLHEALGLGPMWLKQAAAVLPPKNTPATPAQARPQTVRAALIRPSQPHNGQAR 60

Query: 53  ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMI 112
           +  ++ + +  V       +    L  L   +               + A       L +
Sbjct: 61  LETMKALETAAVPTRKPAPETETPLPGLSDGIA-------------PVPAASGI-TKLAV 106

Query: 113 IGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEME 172
           +   P   D I G+ F GK G +LD +L+++ +    +H +        GN   S   +E
Sbjct: 107 VSLCPPIEDAIYGQLFHGKAGVLLDNILKAVGLDAAYVHKTCWVKTAAVGNPMPSEAAIE 166

Query: 173 ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATV 232
                +M++++      +LF+G      F N + Q   + L             P     
Sbjct: 167 TATVSVMQELDGCRAPAVLFLG----QAFVNPERQAMIETL---------CGSRPFFIID 213

Query: 233 HPQELIQYPLIKKNTWHALITLKKALKN 260
           HP  L++ P +K   W  L  LK+AL+ 
Sbjct: 214 HPARLLRQPELKARAWQVLKQLKRALRQ 241


>gi|157164524|ref|YP_001466643.1| uracil-DNA glycosylase superfamily protein [Campylobacter concisus
           13826]
 gi|112800083|gb|EAT97427.1| putative uracil-DNA glycosylase superfamily [Campylobacter concisus
           13826]
          Length = 217

 Score = 89.8 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 68/188 (36%), Gaps = 12/188 (6%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            S+ EL S ++    C L ++S         +   +M +              F G +G 
Sbjct: 38  NSIDELNSEIKKCSLCFLRNSSKCVSTGFGNKNSKIMFVLLC------KKDDYFEGTSGK 91

Query: 135 MLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNI---EMEICRPIIMRQIELISPKIL 190
           +L   + + + + +  ++IS++       +   +       E+CRP ++ +I LI PKI+
Sbjct: 92  ILQNAIKEGLNLEKDSVYISLLLRCEISNSDAKNPALKSSFELCRPYLLEEIRLIKPKII 151

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
           + +G +            +                   + T  P  + + P  +KN    
Sbjct: 152 ITLGEQAFMHL--YPNLLSKGGFSSIRGSILKDDDRFIMPTFSPGWISKNPSFEKNFIDD 209

Query: 251 LITLKKAL 258
           L  +K  +
Sbjct: 210 LKKIKGVI 217


>gi|116748482|ref|YP_845169.1| uracil-DNA glycosylase superfamily protein [Syntrophobacter
           fumaroxidans MPOB]
 gi|116697546|gb|ABK16734.1| Uracil-DNA glycosylase superfamily [Syntrophobacter fumaroxidans
           MPOB]
          Length = 194

 Score = 89.8 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 64/170 (37%), Gaps = 11/170 (6%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLST-ICATQTEGQD-LMIIGYTPSDSDNISGKPFS 129
            K  SLH L   +R     +         +    +     +++IG  P   +   GKPF 
Sbjct: 5   DKERSLHALYDAIRR-DAFYRKENMGDVFVPGDGSMEDGVIVLIGEAPGRDEEREGKPFV 63

Query: 130 GKTGNMLDKMLQSIEIMRTQIHISMISPWHPP----GNRNLSNIEMEICRPIIMRQIELI 185
           G  G  L+ +L    + R  + I+ +  + P      NR+ +  E     P + R+++++
Sbjct: 64  GAAGRNLNALLLENGLAREDLFITNLLKYRPRTSTGANRSPAAAECRYALPFLERELDIL 123

Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
            P + + +G        N+   K  +  G         + +  L T HP 
Sbjct: 124 RPGLAVCLGLSPAKALLNDPHLKMGRANGALF----RGAGLNILVTYHPS 169


>gi|257865744|ref|ZP_05645397.1| uracil-DNA glycosylase [Enterococcus casseliflavus EC30]
 gi|257872079|ref|ZP_05651732.1| uracil-DNA glycosylase [Enterococcus casseliflavus EC10]
 gi|257875374|ref|ZP_05655027.1| uracil-DNA glycosylase [Enterococcus casseliflavus EC20]
 gi|257799678|gb|EEV28730.1| uracil-DNA glycosylase [Enterococcus casseliflavus EC30]
 gi|257806243|gb|EEV35065.1| uracil-DNA glycosylase [Enterococcus casseliflavus EC10]
 gi|257809540|gb|EEV38360.1| uracil-DNA glycosylase [Enterococcus casseliflavus EC20]
          Length = 217

 Score = 89.4 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 56/191 (29%), Gaps = 28/191 (14%)

Query: 99  TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158
            +         LMI+G  P  ++  +  PFSG+ G  L K L    + R  ++I+     
Sbjct: 23  FVPGQGPLQPKLMIVGEAPGRTEIENFIPFSGQAGKELMKSLALAGLTREDVYITSAVRS 82

Query: 159 HP-----------------PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
            P                   NR  +  E+ +  P++  ++ ++ P ++  +GN      
Sbjct: 83  RPYSIKERINKRSGAHEIVHPNRTPTKKEVLLHAPLLDYELSVVDPPVIATVGNIGLQRL 142

Query: 202 FNNDAQKTYQ----NLGKWSN-------LCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
             N              K                    +   HP  +     +       
Sbjct: 143 LGNAYYIKDHHGEVIRSKIQESNPTKDGYQWSEKEYLIVPMYHPAAIFYNRTLTPQIEAD 202

Query: 251 LITLKKALKNL 261
              L+  L  +
Sbjct: 203 WRGLRNILSQI 213


>gi|228920339|ref|ZP_04083686.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228839362|gb|EEM84656.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 213

 Score = 89.4 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 66/184 (35%), Gaps = 30/184 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I++ R +++I+      P 
Sbjct: 26  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMDFLERIDVTREEVYITSAVRSRPY 85

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E I+PK+++ +GN         +
Sbjct: 86  KWREKKERNGEVMQKKYNRTPNQGEIVAHAPLLDYELEKINPKLIVTLGNIGLQRLTGKN 145

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + +  +  L 
Sbjct: 146 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYEVFPTFHPASIFYNRGLLELIYEDLE 204

Query: 253 TLKK 256
            LK+
Sbjct: 205 KLKR 208


>gi|209972970|ref|YP_002300417.1| gp31 [Bacillus phage SPO1]
 gi|209871290|gb|ACI91046.1| gp31 [Bacillus phage SPO1]
          Length = 925

 Score = 89.4 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 7/169 (4%)

Query: 92  LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI- 150
           L   +   +    ++   ++I+   P D +    K  +GK G +L   L  + I   +  
Sbjct: 8   LKEFNPKPMKGQGSKKARIIIVQENPFDYEYRKKKYMTGKAGKLLKFGLAEVGIDPDEDV 67

Query: 151 HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210
           + + I  +  P NR  +  E++     +  +IE+I P I++  GN +  F     A    
Sbjct: 68  YYTSIVKYPTPENRLPTPDEIKESMDYMWAEIEVIDPDIIIPTGNLSLKFLTKMTA--IT 125

Query: 211 QNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
           +  GK   +            +HP  +++ P  +      L  L   L+
Sbjct: 126 KVRGKLYEIE----GRKFFPMIHPNTVLKQPKYQDFFIKDLEILASLLE 170


>gi|216114|gb|AAA03732.1| DNA polymerase [Bacillus phage SPO1]
          Length = 924

 Score = 89.4 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 7/169 (4%)

Query: 92  LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI- 150
           L   +   +    ++   ++I+   P D +    K  +GK G +L   L  + I   +  
Sbjct: 8   LKEFNPKPMKGQGSKKARIIIVQENPFDYEYRKKKYMTGKAGKLLKFGLAEVGIDPDEDV 67

Query: 151 HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210
           + + I  +  P NR  +  E++     +  +IE+I P I++  GN +  F     A    
Sbjct: 68  YYTSIVKYPTPENRLPTPDEIKESMDYMWAEIEVIDPDIIIPTGNLSLKFLTKMTA--IT 125

Query: 211 QNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
           +  GK   +            +HP  +++ P  +      L  L   L+
Sbjct: 126 KVRGKLYEIE----GRKFFPMIHPNTVLKQPKYQDFFIKDLEILASLLE 170


>gi|461960|sp|P30314|DPOL_BPSP1 RecName: Full=DNA polymerase
          Length = 924

 Score = 89.4 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 7/169 (4%)

Query: 92  LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI- 150
           L   +   +    ++   ++I+   P D +    K  +GK G +L   L  + I   +  
Sbjct: 8   LKEFNPKPMKGQGSKKARIIIVQENPFDYEYRKKKYMTGKAGKLLKFGLAEVGIDPDEDV 67

Query: 151 HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210
           + + I  +  P NR  +  E++     +  +IE+I P I++  GN +  F     A    
Sbjct: 68  YYTSIVKYPTPENRLPTPDEIKESMDYMWAEIEVIDPDIIIPTGNLSLKFLTKMTA--IT 125

Query: 211 QNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
           +  GK   +            +HP  +++ P  +      L  L   L+
Sbjct: 126 KVRGKLYEIE----GRKFFPMIHPNTVLKQPKYQDFFIKDLEILASLLE 170


>gi|297196413|ref|ZP_06913811.1| DNA polymerase [Streptomyces pristinaespiralis ATCC 25486]
 gi|297153208|gb|EFH32208.1| DNA polymerase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 213

 Score = 89.4 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 45/136 (33%), Gaps = 10/136 (7%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L  L+        C L   +  T+         ++++G  P D ++  G PF G  G +L
Sbjct: 69  LPALRKAAAGCEGCPLFRNASRTVFGAGPSSARVVVVGEQPGDQEDRQGAPFVGPAGRLL 128

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSN---------IEMEICRPIIMRQIELISP 187
            + L+ + I     + +                         EM  CRP +  ++ +I P
Sbjct: 129 REALEEVGIEEESAYFTNAVKHFKFEPAARGKRRIHKSPSLREMSACRPWLAAELRVIQP 188

Query: 188 KILLFIGN-KTKNFFF 202
           ++    G         
Sbjct: 189 ELFAGSGRDLFVKALL 204


>gi|229155194|ref|ZP_04283306.1| Uracil-DNA glycosylase superfamily [Bacillus cereus ATCC 4342]
 gi|228628321|gb|EEK85036.1| Uracil-DNA glycosylase superfamily [Bacillus cereus ATCC 4342]
          Length = 216

 Score = 89.4 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 30/185 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I + R +++I+      P 
Sbjct: 29  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 88

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E I+PK+++ +GN         D
Sbjct: 89  KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKINPKLIVTLGNIGLQRLAGKD 148

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + +  +  L 
Sbjct: 149 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSEQEYHIFPTFHPASIFYNRSLLELIYEDLE 207

Query: 253 TLKKA 257
            LK+ 
Sbjct: 208 KLKRY 212


>gi|229029309|ref|ZP_04185398.1| Uracil-DNA glycosylase superfamily [Bacillus cereus AH1271]
 gi|228732007|gb|EEL82900.1| Uracil-DNA glycosylase superfamily [Bacillus cereus AH1271]
          Length = 217

 Score = 89.4 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 67/188 (35%), Gaps = 30/188 (15%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L + L+ I + R +++I+      P 
Sbjct: 30  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMEFLERIHVTREEVYITSTVRSRPY 89

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E I+PK+++ +GN          
Sbjct: 90  KWREKKERNGEIIQKKYNRTPNQGEILAHAPLLDYELEKINPKLIVTLGNIGLQRLIG-K 148

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + +  +  L 
Sbjct: 149 NTKITDVHGQLLKKPIQKLKDMQSVEFTWSEKEYHIFPTFHPASIFYNRSLLELIYEDLE 208

Query: 253 TLKKALKN 260
            L+K ++ 
Sbjct: 209 KLEKYVRK 216


>gi|148654495|ref|YP_001274700.1| uracil-DNA glycosylase superfamily protein [Roseiflexus sp. RS-1]
 gi|148566605|gb|ABQ88750.1| Uracil-DNA glycosylase superfamily [Roseiflexus sp. RS-1]
          Length = 193

 Score = 89.4 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 62/165 (37%), Gaps = 10/165 (6%)

Query: 85  RSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKMLQ 141
           +    C  L ++    +         ++ IG  P     + +G PF G ++G +L +ML 
Sbjct: 9   QHCVRCPALVASRRRIVHGYGDVMSGIVFIGEAPGRHGADQTGIPFWGDRSGRILRRMLV 68

Query: 142 SIEIMRT-------QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
            + +          +  I+      PPGNR  +  E++ CR  +  +++ I P++L+ +G
Sbjct: 69  RMGLASDETATASLRCFITNTVRCCPPGNRTPTAAEVQACREWLDTELDAIKPRLLVPVG 128

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
                       +     +            +  L  +HP  + +
Sbjct: 129 RIALQEVGKRYLEGAPGAIRTLHATVLRGREVTILPMMHPARISR 173


>gi|296313436|ref|ZP_06863377.1| uracil-DNA glycosylase, family 4 [Neisseria polysaccharea ATCC
           43768]
 gi|296840023|gb|EFH23961.1| uracil-DNA glycosylase, family 4 [Neisseria polysaccharea ATCC
           43768]
          Length = 247

 Score = 89.4 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 46/270 (17%), Positives = 90/270 (33%), Gaps = 37/270 (13%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDE----------PNNEATYESQRKEKSIDSAI 50
           M S R L   + L +   +   G   +             P  +      ++     +  
Sbjct: 1   MLSARYLHLHEALGLGPMWLKRGAVVLPPATLPESPTQIRPQKQTVLSIPQRPSEQHTGQ 60

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
             +  ++ + +  V     + +    L  +   +              T  +  +    L
Sbjct: 61  ARLKTMKVLETTAVHTRKPVPKTETPLPGVSDGI--------------TPVSAASGITKL 106

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170
            ++   P   D + G+ F GK G +LD +L+++ +    +H +        GN   S   
Sbjct: 107 AVVSLCPPTEDMVYGQLFHGKAGVLLDNILKAVGLDAAYVHKTSWVKTAAVGNPMPSEAA 166

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230
           +E     IM++++      +LF+G      F     Q   + L             P   
Sbjct: 167 IETATVSIMQELDGCRAPAVLFLG----QAFVQPKRQTMIETL---------CGSRPFFI 213

Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALKN 260
             HP  L++ P +K   W  L  LK+AL+ 
Sbjct: 214 IDHPARLLRQPELKARNWQVLKQLKRALRQ 243


>gi|218665955|ref|YP_002425654.1| uracil-DNA glycosylase, family 4 [Acidithiobacillus ferrooxidans
           ATCC 23270]
 gi|218518168|gb|ACK78754.1| uracil-DNA glycosylase, family 4 [Acidithiobacillus ferrooxidans
           ATCC 23270]
          Length = 203

 Score = 89.0 bits (219), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 60/188 (31%), Gaps = 23/188 (12%)

Query: 84  LRSFHDCH-LCSTSLSTICAT---QTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKM 139
           + +   C  LC++    +            +++IG  P   ++  GK F G+ G+ L  +
Sbjct: 1   MDNCQRCPSLCASRTQIVFPDLPEFGRYCRVLVIGEAPGADEDAQGKGFVGRAGHTLHAL 60

Query: 140 LQSIEIMR-TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTK 198
           ++   + R      + I    PP NR  ++IE+ +C P +   I    P  +L +G    
Sbjct: 61  MEEHGLRRGHDYGCANIVRCRPPENRKPTDIEIGMCLPNLANTIANARPVAVLAVGETAT 120

Query: 199 NFFFNNDAQKTYQNLGKWSNLCT--------------PHSIIPTLATVHPQELI--QY-P 241
                           ++ +                            H   L   +  P
Sbjct: 121 RAITGIRGLSENLRFLRYHDHDPIPAEMLCNLNIRAMWPHGAKLFPMPHTSPLAWNRNAP 180

Query: 242 L-IKKNTW 248
              K + W
Sbjct: 181 DGRKWSAW 188


>gi|312870100|ref|ZP_07730236.1| uracil-DNA glycosylase, family 4 [Lactobacillus oris PB013-T2-3]
 gi|311094403|gb|EFQ52711.1| uracil-DNA glycosylase, family 4 [Lactobacillus oris PB013-T2-3]
          Length = 219

 Score = 89.0 bits (219), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 55/182 (30%), Gaps = 28/182 (15%)

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160
                   D+M++G  P   +     PFSG +G  L K+L SI   R   +I+ +    P
Sbjct: 27  PGQGPLHPDIMLVGEAPGRHEEQVNIPFSGASGQELMKLLNSIGYSRENTYITSVVRQRP 86

Query: 161 PG-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
                              NR  +  E+    P+   ++  ++P+I++ +GN        
Sbjct: 87  YSIKQVRDKKTGELVEKRPNRTPTKKEVLAFAPLFDWELATVAPRIIVPLGNTALQRLLG 146

Query: 204 NDAQKTYQNLGKW-----------SNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             A     +  K                        +   HP  ++    +         
Sbjct: 147 PTANIGELHGQKLVRPIQQAASDGKGYQWSTDDYTLVPMYHPAAILYARRLLPTVQADWQ 206

Query: 253 TL 254
            L
Sbjct: 207 KL 208


>gi|229043374|ref|ZP_04191091.1| Uracil-DNA glycosylase superfamily [Bacillus cereus AH676]
 gi|228725955|gb|EEL77195.1| Uracil-DNA glycosylase superfamily [Bacillus cereus AH676]
          Length = 216

 Score = 89.0 bits (219), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 64/188 (34%), Gaps = 30/188 (15%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I + R +++I+      P 
Sbjct: 29  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMVFLERIYVTREEVYITSAVRSRPY 88

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E I PK+++ +GN         +
Sbjct: 89  KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKIHPKLIVTLGNIGLQRLTGKN 148

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + +       
Sbjct: 149 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYHVFPTFHPASIFYNRSLLELIHEDFE 207

Query: 253 TLKKALKN 260
            LK+ +K 
Sbjct: 208 KLKRLVKK 215


>gi|229138323|ref|ZP_04266917.1| Uracil-DNA glycosylase superfamily [Bacillus cereus BDRD-ST26]
 gi|228645088|gb|EEL01326.1| Uracil-DNA glycosylase superfamily [Bacillus cereus BDRD-ST26]
          Length = 236

 Score = 89.0 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 65/185 (35%), Gaps = 30/185 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I + R +++I+      P 
Sbjct: 49  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMVFLERIHVTREEVYITSAVRSRPY 108

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E ++PK+++ +GN          
Sbjct: 109 KWREKKERNGSIIQKKYNRTPNQGEIVAHAPLLDYELEKLNPKLIVTLGNIGLQRLTG-K 167

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
            +K     G+                            T HP  +     + +  +  L 
Sbjct: 168 GKKITDVHGQLLKQPIQKLKDIQSAEFTWSEKEYHIFPTFHPASIFYNRGLLELIYEDLE 227

Query: 253 TLKKA 257
            LK+ 
Sbjct: 228 KLKQY 232


>gi|217959110|ref|YP_002337658.1| uracil-DNA glycosylase family protein [Bacillus cereus AH187]
 gi|217064976|gb|ACJ79226.1| uracil-DNA glycosylase family protein [Bacillus cereus AH187]
          Length = 213

 Score = 89.0 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 65/185 (35%), Gaps = 30/185 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I + R +++I+      P 
Sbjct: 26  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMVFLERIHVTREEVYITSAVRSRPY 85

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E ++PK+++ +GN          
Sbjct: 86  KWREKKERNGSIIQKKYNRTPNQGEIVAHAPLLDYELEKLNPKLIVTLGNIGLQRLTG-K 144

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
            +K     G+                            T HP  +     + +  +  L 
Sbjct: 145 GKKITDVHGQLLKQPIQKLKDIQSAEFTWSEKEYHIFPTFHPASIFYNRGLLELIYEDLE 204

Query: 253 TLKKA 257
            LK+ 
Sbjct: 205 KLKQY 209


>gi|222095259|ref|YP_002529319.1| uracil-DNA glycosylase family protein; DNA polymerase,
           bacteriophage-type [Bacillus cereus Q1]
 gi|221239317|gb|ACM12027.1| uracil-DNA glycosylase family protein; possible DNA polymerase,
           bacteriophage-type [Bacillus cereus Q1]
          Length = 213

 Score = 89.0 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 65/185 (35%), Gaps = 30/185 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I + R +++I+      P 
Sbjct: 26  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 85

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E ++PK+++ +GN          
Sbjct: 86  KWREKKERNGSIIQKKYNRTPNQGEIVAHAPLLDYELEKLNPKLIVTLGNIGLQRLTG-K 144

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
            +K     G+                            T HP  +     + +  +  L 
Sbjct: 145 GKKITDVHGQLLKQPIQKLKDIQSAEFTWSEKEYHIFPTFHPASIFYNRGLLELIYEDLE 204

Query: 253 TLKKA 257
            LK+ 
Sbjct: 205 KLKQY 209


>gi|206975023|ref|ZP_03235938.1| uracil-DNA glycosylase family protein [Bacillus cereus H3081.97]
 gi|206747042|gb|EDZ58434.1| uracil-DNA glycosylase family protein [Bacillus cereus H3081.97]
          Length = 220

 Score = 89.0 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 65/185 (35%), Gaps = 30/185 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I + R +++I+      P 
Sbjct: 33  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 92

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E ++PK+++ +GN          
Sbjct: 93  KWREKKERNGSIIQKKYNRTPNQGEIVAHAPLLDYELEKLNPKLIVTLGNIGLQRLTG-K 151

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
            +K     G+                            T HP  +     + +  +  L 
Sbjct: 152 GKKITDVHGQLLKQPIQKLKDIQSAEFTWSEKEYHIFPTFHPASIFYNRGLLELIYEDLE 211

Query: 253 TLKKA 257
            LK+ 
Sbjct: 212 KLKQY 216


>gi|118473070|ref|YP_889282.1| uracil-DNA glycosylase superfamily protein [Mycobacterium smegmatis
           str. MC2 155]
 gi|118174357|gb|ABK75253.1| uracil-DNA glycosylase superfamily protein [Mycobacterium smegmatis
           str. MC2 155]
          Length = 290

 Score = 88.7 bits (218), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 34/244 (13%), Positives = 67/244 (27%), Gaps = 40/244 (16%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P+                            +    Q   +A  A +L +L +++     C
Sbjct: 17  PHPRTGQLFPSPVPPGTGWPGDPATPSTPVAKTPAQVRRLAASAKTLDDLDAMISVCRAC 76

Query: 91  HLCSTSLSTIC------------------ATQTEGQDLMIIGYTPSDSD-NISGKPFSG- 130
                    +                       E   ++I G  P+    N +G+ F+G 
Sbjct: 77  PRLVAWREEVAVTKRKSFADQPYWGRPATGFGPEAPRILIAGLAPAAQGANRTGRVFTGD 136

Query: 131 KTGNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177
           ++G+ L   L              +  +      ++      PPGN      E   C P 
Sbjct: 137 RSGDFLFAALHRAGLANQAVCVDAADGMRLIDTRMAAAVRCAPPGN-APEPAERATCAPW 195

Query: 178 IMRQIELISPK--ILLFIGNKTKNFFF----NNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231
           +  +  L+ P   +++ +G            +          G  + L T +  +  L  
Sbjct: 196 LAAEWRLVGPSVAVIVALGGFAWRAALELIADRPKPAPKFGHGATATLTTAYGDVTLLGC 255

Query: 232 VHPQ 235
            HP 
Sbjct: 256 YHPS 259


>gi|261400553|ref|ZP_05986678.1| uracil-DNA glycosylase, family 4 [Neisseria lactamica ATCC 23970]
 gi|269209623|gb|EEZ76078.1| uracil-DNA glycosylase, family 4 [Neisseria lactamica ATCC 23970]
          Length = 245

 Score = 88.7 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 90/271 (33%), Gaps = 41/271 (15%)

Query: 1   MTSKRILSQEQILTIAL-FYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNI--- 56
           M S R L   + L +   +   +        P N      Q + +++ +A    +     
Sbjct: 1   MLSARYLHLHEALGLGPMWLKQA---AAVLPPKNTPAPSVQARPQTVRAAPIRPSQPHNV 57

Query: 57  -------RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD 109
                  + + +  V     + +    L  +   +               + A       
Sbjct: 58  QARLETMKALETAAVPTRKPVPETETPLPGVSDGIA-------------PVPAASGI-TR 103

Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI 169
           L ++   P   D + G+ F GK G +LD +L+++ +    +H +        GN   S  
Sbjct: 104 LAVVSLCPPTEDAVYGQLFHGKAGILLDNILKAVGLDAAYVHKTCWVKTAAVGNPMPSEQ 163

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
            +E     I R+++      +LF+G      F   + Q   + L             P  
Sbjct: 164 AIENALGQIARELDGCRAPAVLFLG----QAFVQPERQTMIETL---------CGSRPFF 210

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
              HP  L++ P +K   W  L  LK AL+ 
Sbjct: 211 IIDHPARLLRQPELKARAWQVLKQLKHALRQ 241


>gi|300361921|ref|ZP_07058098.1| uracil-DNA glycosylase [Lactobacillus gasseri JV-V03]
 gi|300354540|gb|EFJ70411.1| uracil-DNA glycosylase [Lactobacillus gasseri JV-V03]
          Length = 216

 Score = 88.7 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 60/189 (31%), Gaps = 31/189 (16%)

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160
                    LMIIG  P   +  S  PF G +G  L K L SI + R  ++I+      P
Sbjct: 25  FGAGPVHPKLMIIGEAPGREEVESLIPFHGASGKELMKSLASIGLKREDVYITSAVRSRP 84

Query: 161 PG-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
                              NR  +  E+    P++  +++   PKI++ +G    +   +
Sbjct: 85  YSVKRVFSKKENKEVIKYPNRKPTKKEILAHAPLLDFELQYAQPKIIVTVGKTALSRLLD 144

Query: 204 NDAQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
           +   +  +  GK                          +   HP  +     +       
Sbjct: 145 HK-YEISKVHGKIIKNTSILELNSKKDGYVWSKEKYTVIPQYHPAAVFYNRKLTDTIAQD 203

Query: 251 LITLKKALK 259
            + +K  +K
Sbjct: 204 WLNIKPLIK 212


>gi|307292872|ref|ZP_07572718.1| uracil-DNA glycosylase superfamily [Sphingobium chlorophenolicum
           L-1]
 gi|306880938|gb|EFN12154.1| uracil-DNA glycosylase superfamily [Sphingobium chlorophenolicum
           L-1]
          Length = 240

 Score = 88.7 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 83/244 (34%), Gaps = 23/244 (9%)

Query: 18  FYADSGVYW-VFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACS 76
           ++  +GV   V +EP +          +   +  +P  +I              A  A  
Sbjct: 19  WWNLAGVDCPVGEEPVDWL--------RPAQTPARPAISIGDDGPVPAHAPAKPASFAAF 70

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L  L               +   I         LM+I   P  +D  +G   S + G + 
Sbjct: 71  LTWLSEDAAQPER--RWPGA--MILPEGPAEAPLMVITDMPDPADVAAGTLLSDRAGQLF 126

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           D ML++I + R  IH++ +    PPG    ++  +      +   + L +P+ LL +G++
Sbjct: 127 DGMLRAIGLKRADIHLASLFLSRPPGAMVEASD-LAAAAARMRTHVMLAAPRRLLLLGDR 185

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
           T      +                     +   AT HP+ L+  P  K   W  L  L +
Sbjct: 186 TIRSLLPDAGS---------RIFNHDGGTLAAFATFHPRLLLGQPAAKAECWRVLQGLIE 236

Query: 257 ALKN 260
            +  
Sbjct: 237 EMSE 240


>gi|229078811|ref|ZP_04211364.1| Uracil-DNA glycosylase superfamily [Bacillus cereus Rock4-2]
 gi|228704493|gb|EEL56926.1| Uracil-DNA glycosylase superfamily [Bacillus cereus Rock4-2]
          Length = 213

 Score = 88.7 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 63/184 (34%), Gaps = 30/184 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I++ R +++I+      P 
Sbjct: 26  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMDFLERIDVTREEVYITSAVRSRPY 85

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E I PK+++ +GN         +
Sbjct: 86  KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKIHPKLIVTLGNIGLQRLTGKN 145

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + +       
Sbjct: 146 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYHVFPTFHPASIFYNRSLLELIHEDFE 204

Query: 253 TLKK 256
            LK+
Sbjct: 205 KLKR 208


>gi|304388415|ref|ZP_07370522.1| DNA polymerase [Neisseria meningitidis ATCC 13091]
 gi|304337596|gb|EFM03758.1| DNA polymerase [Neisseria meningitidis ATCC 13091]
          Length = 246

 Score = 88.7 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 45/270 (16%), Positives = 86/270 (31%), Gaps = 37/270 (13%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDE----------PNNEATYESQRKEKSIDSAI 50
           M S R L   + L +   +   G   +             P  +      ++     +  
Sbjct: 1   MLSARYLHLHEALGLGPMWLKRGAVVLPSATLPESPTQIRPQKQTVLSIPQRPSEQHTGQ 60

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
             +  ++ + +  V       +    L  +   +               + A       L
Sbjct: 61  ARLETMKALETAAVPTRKPAPETETPLSGVSDGIA-------------PVPAASGI-TKL 106

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170
            ++   P   D + G+ F GK G +LD +L+++ +    +H +        GN   S   
Sbjct: 107 AVVSLCPPIEDAVYGQLFHGKAGVLLDNILKAVGLDAAYVHKTCWVKTAAVGNPMPSEQA 166

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230
           +      I R+++      +LF+G      F   + Q   + L             P   
Sbjct: 167 VANALGQIARELDGCCAPAVLFLG----QAFVQPERQAMIETL---------CGSRPFFI 213

Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALKN 260
             HP  L++ P +K   W  L  LK AL+ 
Sbjct: 214 IDHPARLLRQPELKARNWQVLKQLKHALQA 243


>gi|206970527|ref|ZP_03231479.1| uracil-DNA glycosylase family protein [Bacillus cereus AH1134]
 gi|229069181|ref|ZP_04202472.1| Uracil-DNA glycosylase superfamily [Bacillus cereus F65185]
 gi|206734163|gb|EDZ51333.1| uracil-DNA glycosylase family protein [Bacillus cereus AH1134]
 gi|228713933|gb|EEL65817.1| Uracil-DNA glycosylase superfamily [Bacillus cereus F65185]
          Length = 213

 Score = 88.3 bits (217), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 63/184 (34%), Gaps = 30/184 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I++ R +++I+      P 
Sbjct: 26  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMDFLERIDVTREEVYITSAVRSRPY 85

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E I PK+++ +GN         +
Sbjct: 86  KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKIHPKLIVTLGNIGLQRLTGKN 145

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + +       
Sbjct: 146 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYHVFPTFHPASIFYNRSLLELIHEDFE 204

Query: 253 TLKK 256
            LK+
Sbjct: 205 KLKR 208


>gi|154148675|ref|YP_001406203.1| uracil-DNA glycosylase superfamily protein [Campylobacter hominis
           ATCC BAA-381]
 gi|153804684|gb|ABS51691.1| putative uracil-DNA glycosylase superfamily [Campylobacter hominis
           ATCC BAA-381]
          Length = 213

 Score = 88.3 bits (217), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 73/186 (39%), Gaps = 5/186 (2%)

Query: 73  KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
              +L E+   ++  + C LC +  + I    +E  ++M I  +PS++D  +GK +SG  
Sbjct: 33  SFDNLDEMMKEIKVCNLCELCKSKSADILPQGSESSEIMAIFLSPSEADEKNGKIYSGNF 92

Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192
           G  + ++    ++   +I+ + +     P   ++S   +  C P I  +I+L+ PKI+L 
Sbjct: 93  GKKILELFDECKLSSHKIYTTFLIKC--PAPNDISMRTIVNCSPYIFDEIKLVKPKIVLL 150

Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
            G         N+                    +  + T     +   P   +     L 
Sbjct: 151 FGAIVSKIVLRNEQMPDISL---IHGSMFMDGDVKFMPTFDMHFIALNPSKIELFKADLK 207

Query: 253 TLKKAL 258
              K+L
Sbjct: 208 KAGKSL 213


>gi|15922736|ref|NP_378405.1| hypothetical protein ST2405 [Sulfolobus tokodaii str. 7]
 gi|15623527|dbj|BAB67514.1| 217aa long conserved hypothetical protein [Sulfolobus tokodaii str.
           7]
          Length = 217

 Score = 88.3 bits (217), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 71/208 (34%), Gaps = 37/208 (17%)

Query: 80  LKSLLRSFHDCHL----------------CSTSLSTICATQTEGQDLMIIGYTPSDS-DN 122
           L   + S   C                   +     +     E   ++I+G  P+    N
Sbjct: 5   LYDEIVSCSRCERLIEYRKNFKIPPRFKDWNYWNKPVPGFGDEKAKILIVGLAPALHGGN 64

Query: 123 ISGKPFSG-KTGNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSN 168
            +G+ F+G ++G  + K L ++ +   +              +++      PP N   + 
Sbjct: 65  RTGRVFTGDESGKWVIKGLYALGLSNKEEGKTREDGLEVKEVYLTNTVKCAPPKN-KPTR 123

Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT 228
            E+  C   ++ +I+ +  K++L +G    +   +    K+    G    +  P   I  
Sbjct: 124 EEISNCSRFLIEEIKSLRIKVILALGRIAFDTILSLYGIKSKFYHGVV--IKLPDDKI-L 180

Query: 229 LATVHPQELIQYPLIKKNTWHALITLKK 256
           + + HP    Q     +  W   I + K
Sbjct: 181 IGSYHPSA--QNTKTGRLKWEDWIKILK 206


>gi|296502198|ref|YP_003663898.1| DNA polymerase [Bacillus thuringiensis BMB171]
 gi|296323250|gb|ADH06178.1| DNA polymerase [Bacillus thuringiensis BMB171]
          Length = 213

 Score = 88.3 bits (217), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 62/184 (33%), Gaps = 30/184 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I + R +++I+      P 
Sbjct: 26  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMVFLERIHVTREEVYITSAVRSRPY 85

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E I PK+++ +GN         +
Sbjct: 86  KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKIHPKLIVTLGNIGLQRLTGKN 145

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + +       
Sbjct: 146 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYHVFPTFHPASIFYNRSLLELIHEDFE 204

Query: 253 TLKK 256
            LK+
Sbjct: 205 KLKR 208


>gi|228957904|ref|ZP_04119644.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|229109084|ref|ZP_04238684.1| Uracil-DNA glycosylase superfamily [Bacillus cereus Rock1-15]
 gi|229144227|ref|ZP_04272641.1| Uracil-DNA glycosylase superfamily [Bacillus cereus BDRD-ST24]
 gi|228639235|gb|EEK95651.1| Uracil-DNA glycosylase superfamily [Bacillus cereus BDRD-ST24]
 gi|228674362|gb|EEL29606.1| Uracil-DNA glycosylase superfamily [Bacillus cereus Rock1-15]
 gi|228801820|gb|EEM48697.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 216

 Score = 88.3 bits (217), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 62/184 (33%), Gaps = 30/184 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I + R +++I+      P 
Sbjct: 29  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMVFLERIHVTREEVYITSAVRSRPY 88

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E I PK+++ +GN         +
Sbjct: 89  KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKIHPKLIVTLGNIGLQRLTGKN 148

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + +       
Sbjct: 149 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYHVFPTFHPASIFYNRSLLELIHEDFE 207

Query: 253 TLKK 256
            LK+
Sbjct: 208 KLKR 211


>gi|229126942|ref|ZP_04255953.1| Uracil-DNA glycosylase superfamily [Bacillus cereus BDRD-Cer4]
 gi|229149826|ref|ZP_04278054.1| Uracil-DNA glycosylase superfamily [Bacillus cereus m1550]
 gi|228633507|gb|EEK90108.1| Uracil-DNA glycosylase superfamily [Bacillus cereus m1550]
 gi|228656542|gb|EEL12369.1| Uracil-DNA glycosylase superfamily [Bacillus cereus BDRD-Cer4]
          Length = 216

 Score = 88.3 bits (217), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 62/184 (33%), Gaps = 30/184 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I + R +++I+      P 
Sbjct: 29  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMVFLERIHVTREEVYITSAVRSRPY 88

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E I PK+++ +GN         +
Sbjct: 89  KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKIHPKLIVTLGNIGLQRLTGKN 148

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + +       
Sbjct: 149 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYHVFPTFHPASIFYNRSLLELIHEDFE 207

Query: 253 TLKK 256
            LK+
Sbjct: 208 KLKR 211


>gi|30019677|ref|NP_831308.1| DNA polymerase [Bacillus cereus ATCC 14579]
 gi|29895221|gb|AAP08509.1| DNA polymerase, bacteriophage-type [Bacillus cereus ATCC 14579]
          Length = 213

 Score = 88.3 bits (217), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 62/184 (33%), Gaps = 30/184 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I + R +++I+      P 
Sbjct: 26  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMVFLERIHVTREEVYITSAVRSRPY 85

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E I PK+++ +GN         +
Sbjct: 86  KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKIHPKLIVTLGNIGLQRLTGKN 145

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + +       
Sbjct: 146 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYHVFPTFHPASIFYNRSLLELIHEDFE 204

Query: 253 TLKK 256
            LK+
Sbjct: 205 KLKR 208


>gi|218660219|ref|ZP_03516149.1| probable DNA-directed DNA polymerase protein [Rhizobium etli
           IE4771]
          Length = 157

 Score = 88.3 bits (217), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 57/134 (42%), Gaps = 11/134 (8%)

Query: 113 IGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRN 165
           +G  P D ++I+G+PF G  G++LD  L+   + R Q +++                +  
Sbjct: 1   VGEQPGDREDIAGRPFVGPAGHLLDHCLEEAGLNREQCYVTNAVKHFKFTPRGKRRLHAK 60

Query: 166 LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI 225
            +  E+  C   +  ++ ++ PK+++ +G           A+      G       P + 
Sbjct: 61  PNAGEIRRCAWWLGAELNILQPKLVVALGASALYALLGPKAKL-TPERGHILQ---PRNH 116

Query: 226 IPTLATVHPQELIQ 239
            P L T+HP  L++
Sbjct: 117 PPVLVTIHPSFLLR 130


>gi|310779487|ref|YP_003967820.1| DNA polymerase [Ilyobacter polytropus DSM 2926]
 gi|309748810|gb|ADO83472.1| DNA polymerase [Ilyobacter polytropus DSM 2926]
          Length = 193

 Score = 88.3 bits (217), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 65/169 (38%), Gaps = 12/169 (7%)

Query: 97  LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156
              +        D++ IG  P   ++ + +   G +G    K+    ++   + +I+ IS
Sbjct: 30  RKLLLGGGNTKGDILFIGDDPDLFEDENMRVLPGTSGEFFIKLCDLADLSPEKYYITNIS 89

Query: 157 PWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKW 216
                  R LS  E ++ +  +  QI LI PKI++ +G +      N ++       GK 
Sbjct: 90  KC-ILKWRELSEEEKKVMKEYLDMQIALIKPKIIVALGPEVVTVLLNEES-NISDMRGKV 147

Query: 217 SNLCTPHSIIPTLATVHPQELIQYPLI--KK-----NTWHALITLKKAL 258
            N       I  + T  P  + +   +  KK       W+ L  +K  +
Sbjct: 148 YNWE---GNIKVIPTYDPGYVKRVRGLDGKKARPAVEFWNDLKMIKTEI 193


>gi|229195830|ref|ZP_04322589.1| Uracil-DNA glycosylase superfamily [Bacillus cereus m1293]
 gi|228587603|gb|EEK45662.1| Uracil-DNA glycosylase superfamily [Bacillus cereus m1293]
          Length = 236

 Score = 88.3 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 64/185 (34%), Gaps = 30/185 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I + R +++I+      P 
Sbjct: 49  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 108

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+     ++  ++E I+PK+++ +GN         D
Sbjct: 109 KWREKKERNGEIIQKKYNRTPNQGEIVAHASLLDYELEKINPKLIVTLGNIGLQRLAGKD 168

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + +  +  L 
Sbjct: 169 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYHIFPTFHPASIFYNRGLLELIYEDLE 227

Query: 253 TLKKA 257
            LK+ 
Sbjct: 228 KLKQY 232


>gi|218767547|ref|YP_002342059.1| hypothetical protein NMA0583 [Neisseria meningitidis Z2491]
 gi|121051555|emb|CAM07853.1| hypothetical protein NMA0583 [Neisseria meningitidis Z2491]
          Length = 245

 Score = 87.9 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 88/269 (32%), Gaps = 37/269 (13%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60
           M S R L   + L +                       +         A       + + 
Sbjct: 1   MLSARYLHLHEALGL---------------GPMWLKQAAAVLPPKNTPAPSAQARPQTVR 45

Query: 61  SPLVQQADSIAQKAC--SLHELKSLLRSFHDCHLCSTSLSTICATQTEG-------QDLM 111
           +  ++ +     +A   ++  L++           + +     +              L 
Sbjct: 46  AAPIRPSQPHNGQARLETMKALETAAVHTRKPAPETETPPPGLSDGIAPVPAASGITKLA 105

Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEM 171
           ++   P   D + G+ F GK G +LD +L+++ +    +H +        GN   S   +
Sbjct: 106 VVSLCPPIEDAVYGQLFYGKAGVLLDNILKAVGLDAAYVHKTCWVKTAAVGNPMPSEAAI 165

Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231
           E     +M++++      +LF+G      F N + Q   + L             P    
Sbjct: 166 ETATVSVMQELDGCRAPAVLFLG----QAFVNPERQAMIETL---------CGSRPFFII 212

Query: 232 VHPQELIQYPLIKKNTWHALITLKKALKN 260
            HP  L++ P +K   W  L  LK+AL+ 
Sbjct: 213 DHPARLLRQPELKARAWQVLKQLKRALRQ 241


>gi|257459361|ref|ZP_05624472.1| uracil-DNA glycosylase family protein [Campylobacter gracilis
           RM3268]
 gi|257443214|gb|EEV18346.1| uracil-DNA glycosylase family protein [Campylobacter gracilis
           RM3268]
          Length = 218

 Score = 87.9 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 68/201 (33%), Gaps = 24/201 (11%)

Query: 71  AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQ-------------DLMIIGYTP 117
           A+   +L  LKS     + C L  T  S+  + Q                  LMI+   P
Sbjct: 29  ARFFKALDALKSATAECNLCELAKTRTSS--SEQNFKNFKTIKNFKTPANVKLMIVALAP 86

Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177
           S S+         +    LD++         +I+ S +     P NR +S+  +  C P 
Sbjct: 87  SSSEGFGC-GLEAEVAAALDQICAPK-----EIYFSFLIRCAVPQNRRISSEIILKCAPY 140

Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237
           +  +I+++ PKI+L +G         N                     I  + +  P  +
Sbjct: 141 LTDEIKILKPKIVLCLGELCCKIVLRNGDLAGMDV---LHGSVFNEGGISFVPSFDPAFI 197

Query: 238 IQYPLIKKNTWHALITLKKAL 258
            Q P   +     L  +K  L
Sbjct: 198 AQNPSKAELFKEDLQKIKGLL 218


>gi|256847716|ref|ZP_05553161.1| uracil-DNA glycosylase superfamily protein [Lactobacillus
           coleohominis 101-4-CHN]
 gi|256715405|gb|EEU30381.1| uracil-DNA glycosylase superfamily protein [Lactobacillus
           coleohominis 101-4-CHN]
          Length = 218

 Score = 87.9 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 57/196 (29%), Gaps = 38/196 (19%)

Query: 97  LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156
              +         +M++G  P   +  +G PF G +G  L KML    + R  ++I+ + 
Sbjct: 26  TGFVAGMGPMHPRVMLLGEAPGRQEAKTGIPFVGSSGKELMKMLALAGLTRDDVYITSVV 85

Query: 157 PWHP-----------------PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199
              P                   NR  +  E+    P+   +I+ + P+I++ +GN +  
Sbjct: 86  RSRPFSIRQVQDRKTGAMVEKHPNRTPTKKEVLAYAPLFDWEIKTVQPQIIVPLGNTSLQ 145

Query: 200 FFFNNDAQKTYQNLGKWS----------------NLCTPHSIIPTLATVHPQELIQYPLI 243
                 A+      G                                  HP   +    +
Sbjct: 146 RLLGPTAKV-----GSLHGLPQKTTILESLPDDSGYEKGQHQYWVYPMYHPAAYLYARRL 200

Query: 244 KKNTWHALITLKKALK 259
           +             L+
Sbjct: 201 EPTVRKDWQEFGNWLQ 216


>gi|57242369|ref|ZP_00370308.1| DNA polymerase, bacteriophage-type, putative [Campylobacter
           upsaliensis RM3195]
 gi|315638581|ref|ZP_07893755.1| family 4 uracil-DNA glycosylase [Campylobacter upsaliensis JV21]
 gi|57017049|gb|EAL53831.1| DNA polymerase, bacteriophage-type, putative [Campylobacter
           upsaliensis RM3195]
 gi|315481205|gb|EFU71835.1| family 4 uracil-DNA glycosylase [Campylobacter upsaliensis JV21]
          Length = 202

 Score = 87.9 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 67/188 (35%), Gaps = 10/188 (5%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
            +      L+  + +   C+   T    +   + +   L I+    S ++N SG     K
Sbjct: 24  DRLDDFKTLRDKIATCTLCNFSKTRKKILMEERLKPCKLFILDTHASQNENESGILLQSK 83

Query: 132 TGNMLDKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
            G  L   L+ I  + R + + S I         +     +  C P ++ +I+LI PKIL
Sbjct: 84  KGKFLFNSLEKILNLSRDEFYFSYIFKCFSANKNDDFA--LHSCLPFLLNEIKLIKPKIL 141

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
           L +G                   G+             LA+   + L + P  K+  ++ 
Sbjct: 142 LCLGEYALKAL---GFSNFKALKGELFAYEDFF----ILASFDGEFLERNPSFKEEFFND 194

Query: 251 LITLKKAL 258
           L  LK  L
Sbjct: 195 LKKLKGFL 202


>gi|269839729|ref|YP_003324421.1| uracil-DNA glycosylase [Thermobaculum terrenum ATCC BAA-798]
 gi|269791459|gb|ACZ43599.1| Uracil-DNA glycosylase superfamily [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 198

 Score = 87.9 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/199 (23%), Positives = 82/199 (41%), Gaps = 20/199 (10%)

Query: 77  LHELKSLLRSFHDCHLCSTSLST-ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           L  L S + +   C L          A    G  +M+IG  P     I+G+PFSG  G +
Sbjct: 4   LARLHSEILACRRCELEGLLPHPRPVAYGHMGARVMVIGQAPGVRTMIAGRPFSGPGGKL 63

Query: 136 LDKMLQSIEIMR----TQIHISMISPWHP------PGNRNLSNIEMEICRPIIMRQIELI 185
           L   +    I       +++ + ++  +P       G+R  S  E+E+C P + R+IELI
Sbjct: 64  LRGWIARAGIPLEEQDRRVYFTSLTRCYPGKAPKGKGDRKPSAREVELCSPFLQREIELI 123

Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL---IQYPL 242
            P ++L +G+     F         + +G+  +          L   HP  +   + +P 
Sbjct: 124 DPVLVLLVGSMAIERFLG--RMPLAEAVGQLFSRDGRWW----LPLPHPSGVSRWLNHPE 177

Query: 243 IKKNTWHALITLKKALKNL 261
            +     AL  +++ L +L
Sbjct: 178 HRALVEEALERMRELLSSL 196


>gi|229178036|ref|ZP_04305408.1| Uracil-DNA glycosylase superfamily [Bacillus cereus 172560W]
 gi|228605524|gb|EEK62973.1| Uracil-DNA glycosylase superfamily [Bacillus cereus 172560W]
          Length = 213

 Score = 87.9 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 63/184 (34%), Gaps = 30/184 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I++ R +++I+      P 
Sbjct: 26  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLIDFLERIDVTREEVYITSAVRSRPY 85

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E I PK+++ +GN         +
Sbjct: 86  KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKIHPKLIVTLGNIGLQRLTGKN 145

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + +       
Sbjct: 146 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYHVFPTFHPASIFYNRSLLELIHEDFE 204

Query: 253 TLKK 256
            LK+
Sbjct: 205 KLKR 208


>gi|228990645|ref|ZP_04150610.1| Uracil-DNA glycosylase superfamily [Bacillus pseudomycoides DSM
           12442]
 gi|228996743|ref|ZP_04156380.1| Uracil-DNA glycosylase superfamily [Bacillus mycoides Rock3-17]
 gi|229004410|ref|ZP_04162162.1| Uracil-DNA glycosylase superfamily [Bacillus mycoides Rock1-4]
 gi|228756842|gb|EEM06135.1| Uracil-DNA glycosylase superfamily [Bacillus mycoides Rock1-4]
 gi|228763062|gb|EEM11972.1| Uracil-DNA glycosylase superfamily [Bacillus mycoides Rock3-17]
 gi|228769171|gb|EEM17769.1| Uracil-DNA glycosylase superfamily [Bacillus pseudomycoides DSM
           12442]
          Length = 215

 Score = 87.9 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 66/187 (35%), Gaps = 30/187 (16%)

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160
           C    E   LM++G  P +++  +G PFSG+ G  L   L+ I + R +++I+      P
Sbjct: 30  CGQGPEKPKLMLVGEAPGETEIHNGIPFSGRAGKELMGFLERIGLTREEVYITSTVRSRP 89

Query: 161 P----------------GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204
                             NR  +  E+ I  P++  ++E +   +++ +GN         
Sbjct: 90  YIWREKRERSGQVAQKKYNRTPNQGEILIHAPLLDYEMEHVQAPVIVTLGNIALKRLVGP 149

Query: 205 DAQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
           D  K     G+               +      I     T HP  +     +    +  L
Sbjct: 150 DK-KITDVHGQLLQQPVRRLKNNQSTDFIWTEKIYNIFPTFHPASIFYNRGLLDLIYEDL 208

Query: 252 ITLKKAL 258
             L K +
Sbjct: 209 EKLGKYI 215


>gi|313669095|ref|YP_004049379.1| hypothetical protein NLA_18180 [Neisseria lactamica ST-640]
 gi|313006557|emb|CBN88021.1| hypothetical protein NLA_18180 [Neisseria lactamica 020-06]
          Length = 245

 Score = 87.9 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 91/271 (33%), Gaps = 41/271 (15%)

Query: 1   MTSKRILSQEQILTIAL-FYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNI--- 56
           M S R L   + L +   +   +        P N      Q + +++ +A    +     
Sbjct: 1   MLSARYLHLHEALGLGPMWLKQA---AAVLPPKNTPAPSVQARPQTVRAAPIRPSQPHNV 57

Query: 57  -------RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD 109
                  + + +  V       +    L  +   +               + A       
Sbjct: 58  QARLETMKALETAAVHTRKPAPETETPLPGVSDGIA-------------PVPAASGI-TK 103

Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI 169
           L ++   P   D + G+ F GK G +LD +L+++ +    +H +        GN   S  
Sbjct: 104 LAVVSLCPPIEDAVYGQLFHGKAGILLDNILKAVGLDAAYVHKTCWVKTAAVGNPMPSEQ 163

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
            +E     I+R+++      +LF+G      F   + Q   + L          +  P  
Sbjct: 164 AIENALGQIIRELDGCRAPAVLFLG----QAFVQPERQTMIETL---------CAGRPFF 210

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
              HP  L++ P +K   W  L  LK AL+ 
Sbjct: 211 IIDHPARLLRQPELKARAWQVLKQLKHALRQ 241


>gi|261393212|emb|CAX50831.1| putative DNA glycosylase [Neisseria meningitidis 8013]
 gi|325141568|gb|EGC64034.1| putative uracil-DNA glycosylase, family 4 [Neisseria meningitidis
           961-5945]
 gi|325197629|gb|ADY93085.1| putative uracil-DNA glycosylase, family 4 [Neisseria meningitidis
           G2136]
 gi|325207468|gb|ADZ02920.1| putative uracil-DNA glycosylase, family 4 [Neisseria meningitidis
           NZ-05/33]
          Length = 245

 Score = 87.5 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/267 (17%), Positives = 88/267 (32%), Gaps = 33/267 (12%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60
           M S R L   + L +   +              +A      K      A      +R   
Sbjct: 1   MLSARYLHLHEALGLGPMWLK------------QAAAVLPPKNTPATPAQARPQTVRAAP 48

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEG-------QDLMII 113
               Q  +  A+   ++  L++           + +     +              L ++
Sbjct: 49  IRPSQPHNGQARL-ETMKALETAAVHTRKPAPETETPPPGLSDGIAPVPAASGITKLAVV 107

Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173
              P   D + G+ F GK G +LD +L+++ +    +H +        GN   S   +E 
Sbjct: 108 SLCPPIEDAVYGQLFYGKAGVLLDNILKAVGLDAAYVHKTCWVKTAAVGNPMPSEAAIET 167

Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
               +M++++      +LF+G      F   + Q   + L             P     H
Sbjct: 168 ATVSVMQELDGCRAPAVLFLG----QAFVQPERQTMIETL---------CGSRPFFIIDH 214

Query: 234 PQELIQYPLIKKNTWHALITLKKALKN 260
           P  L++ P +K   W  L  LK+AL+ 
Sbjct: 215 PARLLRQPELKARAWQVLKQLKRALRQ 241


>gi|239818041|ref|YP_002946951.1| uracil-DNA glycosylase superfamily [Variovorax paradoxus S110]
 gi|239804618|gb|ACS21685.1| Uracil-DNA glycosylase superfamily [Variovorax paradoxus S110]
          Length = 260

 Score = 87.5 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 58/147 (39%), Gaps = 4/147 (2%)

Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI 169
            +++   P ++D   G+PF+G  G +LD ML+++++      + ++      G       
Sbjct: 112 WLVVADMPPEADGRHGEPFAGDAGKLLDNMLRALKLHDGTTPVHLMRTHR--GVGAGQPG 169

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
                          ++P ++L +G           A    +  G+   L +  S +P +
Sbjct: 170 SPRPMDEAFAEHAAALAPSLVLAMGPLAAQSLMQ-SADPLGKLRGRAVPLPS-DSGVPVV 227

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKK 256
           AT HP  L++ P  K   W  L    +
Sbjct: 228 ATYHPAYLLRNPADKARAWADLCLAAE 254


>gi|323466318|gb|ADX70005.1| Uracil-DNA glycosylase family protein [Lactobacillus helveticus
           H10]
          Length = 278

 Score = 87.1 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 60/189 (31%), Gaps = 31/189 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
            +  +   LMI+G  P  ++ ++  PFSG  G  LDK L+ I + R Q++I+      P 
Sbjct: 85  GSGPKHPLLMIVGEAPGRNEIVNNIPFSGDAGKELDKSLKQIGLSRDQVYITSAVRSRPF 144

Query: 162 G-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204
                             NR  +  E+    P +  +I    P+I++ +GN         
Sbjct: 145 SVKKVFSKRENKEVIKRPNRKPTKKEVLAHAPFLDYEISYADPQIIVALGNTGLERLLGP 204

Query: 205 DAQKTYQNLGKWSN-------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
              K     GK                          +   HP  +     +  +     
Sbjct: 205 -GHKISAEHGKVIENTPILELNTAKDGYVWSKKKYTVIPEYHPAAVFYNRKLSDDIVKDW 263

Query: 252 ITLKKALKN 260
             +K  +  
Sbjct: 264 EVIKPYIDK 272


>gi|161507701|ref|YP_001577657.1| DNA polymerase [Lactobacillus helveticus DPC 4571]
 gi|160348690|gb|ABX27364.1| DNA polymerase [Lactobacillus helveticus DPC 4571]
          Length = 219

 Score = 87.1 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 61/189 (32%), Gaps = 31/189 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
            +  +   LMI+G  P  ++ ++  PFSG  G  LDK L+ I + R Q++I+      P 
Sbjct: 26  GSGPKHPLLMIVGEAPGRNEIVNNIPFSGDAGKELDKSLKQIGLSRDQVYITSAVRSRPF 85

Query: 162 G-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204
                             NR  +  E+    P +  +I    P+I++ +GN         
Sbjct: 86  SVKKVFSKRENKEVIKRPNRKPTKKEVLAHAPFLDYEISYTDPQIIVALGNTGLERLLGP 145

Query: 205 DAQKTYQNLGKWSN-------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
              K     GK  +                       +   HP  +     +  +     
Sbjct: 146 -GHKISAEHGKVIDNTPILELNTAKDGYVWSKKKYTVIPEYHPAAVFYNRKLSDDIVKDW 204

Query: 252 ITLKKALKN 260
             +K  +  
Sbjct: 205 EVIKPYIDK 213


>gi|116629449|ref|YP_814621.1| Uracil-DNA glycosylase [Lactobacillus gasseri ATCC 33323]
 gi|311110903|ref|ZP_07712300.1| putative phage SPO1 DNA polymerase-related protein [Lactobacillus
           gasseri MV-22]
 gi|116095031|gb|ABJ60183.1| Uracil-DNA glycosylase [Lactobacillus gasseri ATCC 33323]
 gi|311066057|gb|EFQ46397.1| putative phage SPO1 DNA polymerase-related protein [Lactobacillus
           gasseri MV-22]
          Length = 211

 Score = 87.1 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 57/185 (30%), Gaps = 31/185 (16%)

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160
                    LMIIG  P   +  S  PF G +G  L K L SI + R  ++I+      P
Sbjct: 25  FGAGPAHPKLMIIGEAPGREEIESLIPFHGASGKELMKSLASIGLKREDVYITSAVRSRP 84

Query: 161 PG-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
                              NR  +  E+    P++  ++    PK+++ +G    +   +
Sbjct: 85  YSVKKVFSKKENKEVTKYPNRKPTKKEILAHAPLLDFELRYAQPKVIVTVGTTALSRLLD 144

Query: 204 NDAQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
           +   +  +  GK                          +   HP  +     +       
Sbjct: 145 HK-YEISKVHGKIIKNTSILELNDKKDGYVWSKEKYTVVPQYHPAAVFYNRKLTDIIAQD 203

Query: 251 LITLK 255
            + +K
Sbjct: 204 WLNVK 208


>gi|319409811|emb|CBY90119.1| putative DNA glycosylase [Neisseria meningitidis WUE 2594]
          Length = 245

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 88/269 (32%), Gaps = 37/269 (13%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60
           M S R L   + L +                       +         A       + + 
Sbjct: 1   MLSARYLHLHEALGL---------------GPMWLKQAAAVLPPKNTPAPSAQARPQTVR 45

Query: 61  SPLVQQADSIAQKAC--SLHELKSLLRSFHDCHLCSTSLSTICATQTEG-------QDLM 111
           +  ++ +     +A   ++  L++           + +     +              L 
Sbjct: 46  AAPIRPSQPHNGQARLETMKALETAAVHTRKPAPETETPPPGLSDGIAPVPAASGITKLA 105

Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEM 171
           ++   P   D + G+ F GK G +LD +L+++ +    +H +        GN   S   +
Sbjct: 106 VVSLCPPIEDAVYGQLFYGKAGVLLDNILKAVGLDAAYVHKTCWVKTAAVGNPMPSEAAI 165

Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231
           E     +M++++      +LF+G      F N + Q   + L             P    
Sbjct: 166 ETATVSVMQELDGCRAPAVLFLG----QAFANPERQAMIETL---------CGSRPFFII 212

Query: 232 VHPQELIQYPLIKKNTWHALITLKKALKN 260
            HP  L++ P +K   W  L  LK+AL+ 
Sbjct: 213 DHPARLLRQPELKARAWQVLKQLKRALRQ 241


>gi|325131515|gb|EGC54222.1| putative uracil-DNA glycosylase, family 4 [Neisseria meningitidis
           M6190]
          Length = 245

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 47/267 (17%), Positives = 88/267 (32%), Gaps = 33/267 (12%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60
           M S R L   + L +   +              +A      K      A      +R   
Sbjct: 1   MLSARYLHLHEALGLGPMWLK------------QAAAVLPPKNTPATPAQARPQTVRAAP 48

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEG-------QDLMII 113
               Q  +  A+   ++  L++           + +     +              L ++
Sbjct: 49  IRPSQPHNGQARL-ETMKALETAAVPTRKPAPETETPPPGLSDGIAPVPAASGITKLAVV 107

Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173
              P   D + G+ F GK G +LD +L+++ +    +H +        GN   S   +E 
Sbjct: 108 SLCPPIEDAVYGQLFYGKAGVLLDNILKAVGLDAAYVHKTCWVKTAAVGNPMPSEAAIET 167

Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
               +M++++      +LF+G      F   + Q   + L             P     H
Sbjct: 168 ATVSVMQELDGCRAPAVLFLG----QAFVQPERQTMIETL---------CGSRPFFIIDH 214

Query: 234 PQELIQYPLIKKNTWHALITLKKALKN 260
           P  L++ P +K   W  L  LK+AL+ 
Sbjct: 215 PARLLRQPELKARAWQVLKQLKRALRQ 241


>gi|227892622|ref|ZP_04010427.1| uracil-DNA glycosylase [Lactobacillus ultunensis DSM 16047]
 gi|227865607|gb|EEJ73028.1| uracil-DNA glycosylase [Lactobacillus ultunensis DSM 16047]
          Length = 218

 Score = 86.3 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 59/187 (31%), Gaps = 31/187 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
            +      LMI+G  P  ++ ++  PFSG  G  LDK L+ I + R Q++I+      P 
Sbjct: 26  GSGPRYPLLMIVGEAPGRNEIVNNIPFSGDAGKELDKSLKQIGLTRDQVYITSAVRSRPY 85

Query: 162 G-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204
                             NR  +  E+    P +  +I    PK+++ +GN         
Sbjct: 86  SIKKVFSKRENKEVTKYPNRKPTKKEILAHAPFLDYEIAYAQPKLIVALGNTGLERLIGP 145

Query: 205 DAQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
              K     GK                              HP  +     + K+     
Sbjct: 146 -GHKISAEHGKVIKNTSILKLNKQKDGYIWSEEKYTIFPEYHPAAVFYNRKLAKDIKKDW 204

Query: 252 ITLKKAL 258
             +K  +
Sbjct: 205 EVIKPFI 211


>gi|238852599|ref|ZP_04643009.1| uracil-DNA glycosylase [Lactobacillus gasseri 202-4]
 gi|238834745|gb|EEQ26972.1| uracil-DNA glycosylase [Lactobacillus gasseri 202-4]
          Length = 211

 Score = 86.3 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 57/185 (30%), Gaps = 31/185 (16%)

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160
                    LMIIG  P   +  S  PF G +G  L K L SI + R  ++I+      P
Sbjct: 25  FGAGPAHPKLMIIGEAPGREEIESLIPFHGASGEELMKSLASIGLKREDVYITSAVRSRP 84

Query: 161 PG-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
                              NR  +  E+    P++  ++    PK+++ +G    +   +
Sbjct: 85  YSVKKVFSKKENKEVTKYPNRKPTKKEILAHAPLLDFELRYAQPKVIVTVGTTALSRLLD 144

Query: 204 NDAQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
           +   +  +  GK                          +   HP  +     +       
Sbjct: 145 HK-YEISKVHGKIIKNTSILELNDKKDGYVWSKEKYTVVPQYHPAAVFYNRKLTDIIAQD 203

Query: 251 LITLK 255
            + +K
Sbjct: 204 WLNVK 208


>gi|255068558|ref|ZP_05320413.1| 4, uracil-DNA glycosylase family [Neisseria sicca ATCC 29256]
 gi|255047194|gb|EET42658.1| 4, uracil-DNA glycosylase family [Neisseria sicca ATCC 29256]
          Length = 264

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 92/288 (31%), Gaps = 53/288 (18%)

Query: 1   MTSKRILSQEQILTIALFYAD--------SGVYWVFDEPNNEATYESQRK---------- 42
           M S R L   Q L +   + +        +G      +P   A  +              
Sbjct: 1   MLSSRYLHLHQALGLGPMWLNRHAKVIPPAG-DASVTQPQKPAAAQVAEAVRTISASAHH 59

Query: 43  -----------EKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCH 91
                      EK+  +   PI +           A + +    +     + +       
Sbjct: 60  ARMAAMAAVQHEKTASATTPPIPSTAAPVDAPFPSARTHSAPENTGQAPAATVSD----D 115

Query: 92  LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH 151
           L         +       ++II   P+  D++ G+ F G  G +LD ML +I +   Q +
Sbjct: 116 LPRLQTEARPSE------VIIISICPATEDSLHGQLFHGAVGVLLDNMLAAIRLTPQQAY 169

Query: 152 ISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQ 211
            +      P  + + ++ +++   P + R++     K +L +G   +             
Sbjct: 170 KTSWVKAAPVFSPHPTDEQIQAELPQLARELADTQAKAVLLVGQIFEKPELAP------- 222

Query: 212 NLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
                 +    ++    L   HP  L++ P +K   W  L  +++ L 
Sbjct: 223 ----LIDTLCGNTPRFILP--HPARLLRQPQLKAKAWQVLKQVRQILN 264


>gi|326939246|gb|AEA15142.1| DNA polymerase [Bacillus thuringiensis serovar chinensis CT-43]
          Length = 213

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 66/184 (35%), Gaps = 30/184 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG++G  L   L+ I + R +++I+      P 
Sbjct: 26  GQGPENPKFMLLGEAPGETEIHNGIPFSGRSGKQLMGFLERIHVTREEVYITSAVRSRPY 85

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E I+ ++++ +GN         +
Sbjct: 86  KWREKKERNGESIQKKYNRTPNQGEIVAHAPLLDYELEKINSRLIVTLGNIGLQRLTGKN 145

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                     +      T HP  +     + +  +  L 
Sbjct: 146 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSENEYHVFPTFHPASIFYNRSLLELIYEDLE 204

Query: 253 TLKK 256
            LK+
Sbjct: 205 KLKR 208


>gi|228938740|ref|ZP_04101343.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228971622|ref|ZP_04132244.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228978231|ref|ZP_04138608.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis Bt407]
 gi|228781248|gb|EEM29449.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis Bt407]
 gi|228788035|gb|EEM35992.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228820915|gb|EEM66937.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar
           berliner ATCC 10792]
          Length = 216

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 66/184 (35%), Gaps = 30/184 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG++G  L   L+ I + R +++I+      P 
Sbjct: 29  GQGPENPKFMLLGEAPGETEIHNGIPFSGRSGKQLMGFLERIHVTREEVYITSAVRSRPY 88

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E I+ ++++ +GN         +
Sbjct: 89  KWREKKERNGESIQKKYNRTPNQGEIVAHAPLLDYELEKINSRLIVTLGNIGLQRLTGKN 148

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                     +      T HP  +     + +  +  L 
Sbjct: 149 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSENEYHVFPTFHPASIFYNRSLLELIYEDLE 207

Query: 253 TLKK 256
            LK+
Sbjct: 208 KLKR 211


>gi|121634213|ref|YP_974458.1| hypothetical protein NMC0346 [Neisseria meningitidis FAM18]
 gi|120865919|emb|CAM09656.1| hypothetical protein NMC0346 [Neisseria meningitidis FAM18]
 gi|325201488|gb|ADY96942.1| putative uracil-DNA glycosylase, family 4 [Neisseria meningitidis
           M01-240149]
          Length = 244

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 51/269 (18%), Positives = 88/269 (32%), Gaps = 37/269 (13%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITN----- 55
           M S R L   + L +   +       V    N  AT    R +    + I+P        
Sbjct: 1   MLSARYLHLHEALGLGPMWLKQAA-AVLPPKNTPATPAQARPQTVRAAPIRPSQPHNGQA 59

Query: 56  ----IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLM 111
               ++ + +  V       +    L  L   +               + A       L 
Sbjct: 60  RLETMKALETAAVPTRKPAPETETPLPGLSDGIA-------------PVPAASGI-TKLA 105

Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEM 171
           ++   P   D + G+ F GK G +LD +L+++ +    +H +        GN   S   +
Sbjct: 106 VVSLCPPIEDAVYGQLFHGKAGVLLDNILKAVGLDAAYVHKTSWVKTAAVGNPMPSEQAV 165

Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231
                 I R+++      +LF+G      F   + Q   + L             P    
Sbjct: 166 ANALGQIARELDGCRAPAVLFLG----QAFVQPERQTMIETL---------CGSRPFFII 212

Query: 232 VHPQELIQYPLIKKNTWHALITLKKALKN 260
            HP  L++ P +K   W  L  LK AL+ 
Sbjct: 213 DHPARLLRQPELKARNWQVLKQLKHALQA 241


>gi|119509115|ref|ZP_01628266.1| Phage SPO1 DNA polymerase-related protein [Nodularia spumigena
           CCY9414]
 gi|119466281|gb|EAW47167.1| Phage SPO1 DNA polymerase-related protein [Nodularia spumigena
           CCY9414]
          Length = 139

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 1/112 (0%)

Query: 62  PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121
           P   +         ++ EL       H C L       +         +M+IG  P  ++
Sbjct: 22  PTNAKIPITPGTYNNITELTQDCNQCHRCGLGDNRTHAVVGRGHLQAPIMLIGEAPGQNE 81

Query: 122 NISGKPFSGKTGNMLDKMLQSIE-IMRTQIHISMISPWHPPGNRNLSNIEME 172
           + +G PF G++G +L+K+L S+       I+I+ I+   PP     + ++  
Sbjct: 82  DETGLPFVGRSGQLLEKILASVNLTTEQDIYIANINKCRPPKTERPTLMKWR 133


>gi|16081596|ref|NP_393955.1| hypothetical protein Ta0477 [Thermoplasma acidophilum DSM 1728]
 gi|10639647|emb|CAC11619.1| conserved hypothetical protein [Thermoplasma acidophilum]
          Length = 229

 Score = 86.0 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 66/223 (29%), Gaps = 40/223 (17%)

Query: 75  CSLHELKSLLRSFHDCH-LCSTSL----------------STICATQTEGQDLMIIGYTP 117
             + E+   L +   C  L                       +         L+I+G  P
Sbjct: 8   ADIREMNDRLIACERCPRLVEFRKAVVGRDKRFRGETYWARPVPGYGDINGRLLIVGLAP 67

Query: 118 SDS-DNISGKPFSGKT-GNMLDKMLQSIEIMRTQI-------------HISMISPWHPPG 162
           + S  N +G+ F+G    + L   L    I                  +I+      PP 
Sbjct: 68  AASGGNRTGRVFTGDKSSDFLVSCLHEAGITNQPTSERRDDGLIYYDAYITAAVKCVPPD 127

Query: 163 NRNLSNIEMEICRPIIMRQI-ELISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSN 218
           N      E+E C   +  +I  + + K++L +G            + A+   +       
Sbjct: 128 N-KPLPEEIENCSVYLRSEIGFMKNLKVILVLGQIALQAVVRLIADPAEPRSRYR-FVHG 185

Query: 219 LCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
                + I  + + HP    +     K      + L K +K +
Sbjct: 186 AVYSMNGIRVVCSYHPSP--RNVNTGKLKRSDFVDLLKKVKEM 226


>gi|261379409|ref|ZP_05983982.1| uracil-DNA glycosylase, family 4 [Neisseria subflava NJ9703]
 gi|284797858|gb|EFC53205.1| uracil-DNA glycosylase, family 4 [Neisseria subflava NJ9703]
          Length = 255

 Score = 86.0 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 43/268 (16%), Positives = 85/268 (31%), Gaps = 23/268 (8%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRH-I 59
           M S R L   + L +   + +     +   P    +    R +       Q +  +    
Sbjct: 1   MLSSRYLHLHEALGLGPMWLNRNAKIIHAAPQTATSAAPVRPKTIAADTAQTVRTLSAGA 60

Query: 60  HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD-------LMI 112
           H        +      ++   ++  ++  +      +     +      D       +M+
Sbjct: 61  HQARTAAIATAQAAKPAVRAPEAAPKAIAETPTK--TEKAAHSDNLPRLDVTIRPSEIMV 118

Query: 113 IGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEME 172
           +   PS  D++ G  FSG  G +LD +L +I +   Q H +      P          + 
Sbjct: 119 VSICPSTEDSLHGTLFSGDVGTLLDNILAAIGLKPEQAHKTAWVKTAPVFTALPDAEHIR 178

Query: 173 ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATV 232
                +  ++     + +LF+G              +   +G  + LC      P     
Sbjct: 179 SELAEMQNELTASQARAVLFLGKI----------FDSPDMIGLMNELCAE---RPHFVIP 225

Query: 233 HPQELIQYPLIKKNTWHALITLKKALKN 260
           HP  L+  P +K   W  L  LK+ L  
Sbjct: 226 HPARLLMQPQLKAQAWQILKPLKQLLAK 253


>gi|325957077|ref|YP_004292489.1| Uracil-DNA glycosylase family protein [Lactobacillus acidophilus
           30SC]
 gi|325333642|gb|ADZ07550.1| Uracil-DNA glycosylase family protein [Lactobacillus acidophilus
           30SC]
          Length = 215

 Score = 86.0 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 59/189 (31%), Gaps = 31/189 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
            +  +   LMIIG     ++ ++  PFSG  G  L+K L  I + R  ++I+      P 
Sbjct: 26  GSGPKHPKLMIIGEALGRNEIVNNIPFSGDAGKELNKSLAQIGLTRDDVYITSAVRSRPY 85

Query: 162 G-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204
                             NR  +  E+    P +  +I+   PK+++ +GN         
Sbjct: 86  AIKKVFSKRENKEVTKYPNRKPTKKEVLAHAPFLDYEIDYAQPKLIVALGNTGLERLLGL 145

Query: 205 DAQKTYQNLGKWSN-------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
              K  +  GK                              HP  +     +  +     
Sbjct: 146 -GHKISEEHGKVIENTPILRLNPQKDGYVWSKQRYTIFPEYHPAAVFYNRKLSDDIIKDW 204

Query: 252 ITLKKALKN 260
             +K  L+ 
Sbjct: 205 NVIKPYLEK 213


>gi|223937591|ref|ZP_03629494.1| Uracil-DNA glycosylase superfamily [bacterium Ellin514]
 gi|223893754|gb|EEF60212.1| Uracil-DNA glycosylase superfamily [bacterium Ellin514]
          Length = 295

 Score = 85.6 bits (210), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 66/166 (39%), Gaps = 12/166 (7%)

Query: 80  LKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKM 139
           L   ++    C LC      + +       ++++G  P D + I G+PF+   G  L K 
Sbjct: 100 LDEHVQRLRACVLCPAMHKPVVSGGAVMSKVLLVGQAPGDKEPIMGRPFAWTAGKTLFKW 159

Query: 140 LQSIEIM-----RTQIHISMISPWHP-----PGNRNLSNIEMEICRPIIMRQIELISPKI 189
              +  M     R  I+++ +    P      G+R  S IE++ C   + R++E++ P++
Sbjct: 160 FNDVAGMSEVQFRASIYMAAVCRCFPGKKPTGGDRVPSPIEVQTCSGWLKREMEILKPEL 219

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
           ++ +G      F         + +G+   +         +   HP 
Sbjct: 220 VIPVGKLAIEQFIPPRKLD--EIIGRKMRVTYAGHEFDLIPLPHPS 263


>gi|117929110|ref|YP_873661.1| uracil-DNA glycosylase superfamily protein [Acidothermus
           cellulolyticus 11B]
 gi|117649573|gb|ABK53675.1| Uracil-DNA glycosylase superfamily [Acidothermus cellulolyticus
           11B]
          Length = 312

 Score = 85.6 bits (210), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 73/242 (30%), Gaps = 45/242 (18%)

Query: 38  ESQRKEKSIDSAIQPITNIRHIHSPLVQQAD--SIAQKACSLHELKSLLRSFHDCHLCST 95
               + +       P+             AD   +A  A  L EL +       C     
Sbjct: 44  SRGARPRDPARLGTPVARSAADDPVARSAADVSRLAASAEDLAELDARSSCCRACPRLVA 103

Query: 96  SL------------------STICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNM 135
                                 +         ++++G  P+    N +G+ F+G ++G+ 
Sbjct: 104 WREKVAAQRRRAFATETYWGRPVPGFGDPAARIVVVGLAPAAHGGNRTGRIFTGDRSGDW 163

Query: 136 LDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSNIEMEICRPIIMRQI 182
           L   L      R                 +  +    PP     + +E + CRP ++R++
Sbjct: 164 LFAALYRAGFARQPTSERVDDGQRLDGVRLVAVVRCAPP-ANKPTPVERDTCRPWLVREL 222

Query: 183 ELISPKILLFIGNKTKNFF------FNNDAQKTYQNLGKWSNLCT---PHSIIPTLATVH 233
           EL+  ++L+ +G                   + + + G   ++         +  LA+ H
Sbjct: 223 ELLPARVLVVLGGFAWQSLPPTLARLGFLIPRPFPSFGHGRSVTIAHPDGRRLHLLASYH 282

Query: 234 PQ 235
           P 
Sbjct: 283 PS 284


>gi|301053166|ref|YP_003791377.1| uracil-DNA glycosylase family protein [Bacillus anthracis CI]
 gi|300375335|gb|ADK04239.1| uracil-DNA glycosylase family protein [Bacillus cereus biovar
           anthracis str. CI]
          Length = 213

 Score = 85.6 bits (210), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 66/185 (35%), Gaps = 30/185 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E  + +++G  P +++  +G PFSG+ G  L   L+ I + R +++I+      P 
Sbjct: 26  GQGPENPEFILLGEAPGETEIHNGIPFSGRAGKQLMGFLERIHVTREEVYITSAVRSRPY 85

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E ++PK+++ +GN         D
Sbjct: 86  KWREKKERNGSIIQKKYNRTPNQGEIVAHAPLLDYELEKLNPKLIVTLGNIGLQRLTGKD 145

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + +  +  L 
Sbjct: 146 K-KITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYHIFPTFHPASIFYNRSLLELIYEDLE 204

Query: 253 TLKKA 257
            LK+ 
Sbjct: 205 KLKQY 209


>gi|163782682|ref|ZP_02177679.1| uracil-DNA glycosylase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882255|gb|EDP75762.1| uracil-DNA glycosylase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 229

 Score = 85.6 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 71/225 (31%), Gaps = 43/225 (19%)

Query: 75  CSLHELKSLLRSFHDCHL-------------CSTSL-----STICATQTEGQDLMIIGYT 116
             L  LK  + S   C                  +        +        +L+I+G  
Sbjct: 2   KELDLLKEEIISCQRCPRISEYIRDVARKKVKRFAKEDYWGKPLPGFGDPKAELLIVGLA 61

Query: 117 PSDS-DNISGKPFSGK-TGNMLDKMLQSIEIMRTQI-------------HISMISPWHPP 161
           P+    N +G+ F+G  +GN L + L                       +I+ +    PP
Sbjct: 62  PAAHGGNRTGRMFTGDSSGNWLARALYETGFANKPESVNKDDGLDLKGAYITAVVRCAPP 121

Query: 162 GNRNLSNIEMEICRPIIMRQIELIS-PKILLFIGNKTKNFFF--NNDAQKTYQNLGKWSN 218
            N   +  EME C   ++R++E++   K++L +G+               T Q  G    
Sbjct: 122 EN-KPTKEEMENCNTFLIRELEILKEVKVILCLGSIALKGTLMALKKLYPTAQLRGIKFG 180

Query: 219 ----LCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
                         + + HP    Q     +  W   + + K ++
Sbjct: 181 HNFVYKPEGLPYTLMTSYHPS--KQNTQTGRLKWEDWVGVFKRVR 223


>gi|229189710|ref|ZP_04316724.1| Uracil-DNA glycosylase superfamily [Bacillus cereus ATCC 10876]
 gi|228593759|gb|EEK51564.1| Uracil-DNA glycosylase superfamily [Bacillus cereus ATCC 10876]
          Length = 213

 Score = 84.4 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 63/184 (34%), Gaps = 30/184 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I++ R +++I+      P 
Sbjct: 26  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMDFLERIDVTREEVYITSAVRSRPY 85

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E I PK+++ +GN         +
Sbjct: 86  KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKIHPKLIVTLGNIGLQRLTGKN 145

Query: 206 AQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
             K     G+                            T HP  +     + +       
Sbjct: 146 K-KITDIHGQLLKQPIQKLKDMQSAEFTWSEKEYHVFPTFHPASIFCNRSLLELIHEDFE 204

Query: 253 TLKK 256
            LK+
Sbjct: 205 KLKR 208


>gi|295693158|ref|YP_003601768.1| uracil-DNA glycosylase family protein [Lactobacillus crispatus ST1]
 gi|295031264|emb|CBL50743.1| Uracil-DNA glycosylase family protein [Lactobacillus crispatus ST1]
          Length = 219

 Score = 84.4 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 59/184 (32%), Gaps = 31/184 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP- 160
            +  +   LMI+G  P  ++ ++  PFSG  G  LDK L+ I + R Q++I+      P 
Sbjct: 26  GSGPQHPLLMIVGEAPGRNEIVNNIPFSGDAGKELDKSLEQIGLTRDQVYITSAVRSRPF 85

Query: 161 ----------------PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204
                             NR  +  E+    P +  +I+   PK+++ +GN         
Sbjct: 86  AIKKVFSKRENKEVIKYPNRKPTKKEILAHAPFLDFEIDYAQPKLIVALGNTGLERLLG- 144

Query: 205 DAQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
              K     G+                              HP  +     +  +     
Sbjct: 145 SGHKISAEHGQVIKNTPILRLNETKDGYIWSKERYTIFPEYHPAAVFYNRKLTDDIIKDW 204

Query: 252 ITLK 255
             +K
Sbjct: 205 DKIK 208


>gi|256843362|ref|ZP_05548850.1| DNA polymerase [Lactobacillus crispatus 125-2-CHN]
 gi|293381192|ref|ZP_06627200.1| uracil-DNA glycosylase, family 4 [Lactobacillus crispatus 214-1]
 gi|256614782|gb|EEU19983.1| DNA polymerase [Lactobacillus crispatus 125-2-CHN]
 gi|290922232|gb|EFD99226.1| uracil-DNA glycosylase, family 4 [Lactobacillus crispatus 214-1]
          Length = 219

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 58/184 (31%), Gaps = 31/184 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP- 160
            +  +   LMI+G  P  ++ ++  PFSG  G  LDK L+ I + R Q++I+      P 
Sbjct: 26  GSGPQHPLLMIVGEAPGRNEIVNNIPFSGDAGKELDKSLKQIGLTRDQVYITSAVRSRPF 85

Query: 161 ----------------PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204
                             NR  +  E+      +  +I+   PK+++ +GN         
Sbjct: 86  AIKKVFSKRENKEVIKYPNRKPTKKEILAHAHFLDFEIDYAQPKLIVALGNTGLERLLG- 144

Query: 205 DAQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
              K     G+                              HP  +     +  +     
Sbjct: 145 SGHKISAEHGQVIKNTPILRLNETKDGYIWSKERYTIFPEYHPAAVFYNRKLTDDIIKDW 204

Query: 252 ITLK 255
             +K
Sbjct: 205 DKIK 208


>gi|257869030|ref|ZP_05648683.1| uracil-DNA glycosylase [Enterococcus gallinarum EG2]
 gi|257803194|gb|EEV32016.1| uracil-DNA glycosylase [Enterococcus gallinarum EG2]
          Length = 215

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 55/182 (30%), Gaps = 30/182 (16%)

Query: 99  TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158
            +         LMI+G  P  ++  +  PFSG+ G  L   L  + + R +++I+     
Sbjct: 23  FVPGQGPLHPKLMIVGEAPGRTEIENFIPFSGQAGKELMASLALVGLTREEVYITSAVRS 82

Query: 159 HP-----------------PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
            P                   NR  +  E+ +  P++  +I+ + P ++  +GN      
Sbjct: 83  RPYSIKERINKRSGAHEVVHPNRTPTKKEVLLHAPLLDYEIQKVDPPLIATVGNIGLQRL 142

Query: 202 FNNDAQKTYQNLGKWS------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249
              +        G+                         +   HP  +     + +    
Sbjct: 143 LG-NRYSITNVHGQPIRSAIQQLNAEKNGYTWSDKQYLIVPMYHPAAIFYNRTLAERIHQ 201

Query: 250 AL 251
             
Sbjct: 202 DW 203


>gi|58337558|ref|YP_194143.1| DNA polymerase [Lactobacillus acidophilus NCFM]
 gi|227904199|ref|ZP_04022004.1| uracil-DNA glycosylase [Lactobacillus acidophilus ATCC 4796]
 gi|58254875|gb|AAV43112.1| DNA polymerase [Lactobacillus acidophilus NCFM]
 gi|227868218|gb|EEJ75639.1| uracil-DNA glycosylase [Lactobacillus acidophilus ATCC 4796]
          Length = 219

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 59/189 (31%), Gaps = 31/189 (16%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
            +  +   LM++G  P  ++ ++  PFSG  G  L+K L+ I + R +++I+      P 
Sbjct: 26  GSGPKHPLLMLVGEAPGRNEIVNNIPFSGDAGKELNKSLEQIGLTRDEVYITSAVRSRPY 85

Query: 162 G-----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204
                             NR  +  E+    P +  +I+   PK+++ +G+         
Sbjct: 86  AIKKTFSKRENKEVTKYPNRKPTKKEILAHGPFLDYEIDYAQPKLIVALGSTGLERLLG- 144

Query: 205 DAQKTYQNLGKWSN-------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
              K  +  G                               HP  +     +        
Sbjct: 145 SGHKISEEHGTVIENTPILKLNSAKDGYIWSKERYTIFPEYHPAAIFYNRKLTDIIVKDW 204

Query: 252 ITLKKALKN 260
             +K  L  
Sbjct: 205 EVIKPYLAK 213


>gi|240127419|ref|ZP_04740080.1| hypothetical protein NgonS_02017 [Neisseria gonorrhoeae SK-93-1035]
 gi|268685795|ref|ZP_06152657.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
 gi|268626079|gb|EEZ58479.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
          Length = 245

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 86/267 (32%), Gaps = 33/267 (12%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60
           M S R L   + L +   +              +        + +  +  Q         
Sbjct: 1   MLSARYLHLHEALGLGPMWL-------------KQAAAVLPPKNTPATPAQARPQTVRAA 47

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEG-------QDLMII 113
           +    Q  ++  +  ++  L++           + +     +              L ++
Sbjct: 48  TIRPSQPHNVQARLETMKALETAAVHTRKPAPETETPPPGLSDGIAPVPAASGITKLAVV 107

Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173
              P   D + G+ F GK G +LD +L++  +    +H +        GN   S   +  
Sbjct: 108 SLCPPIEDAVYGQLFHGKAGILLDNILKAAGLDAAYVHKTCWVKTAAVGNPMPSEQAVAD 167

Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
               I R+++      +LF+G      F N + Q   + L             P     H
Sbjct: 168 ALGQIARELDGCRAPAVLFLG----QAFVNLERQAMIETL---------CGSRPFFIIDH 214

Query: 234 PQELIQYPLIKKNTWHALITLKKALKN 260
           P  L++ P +K   W  L  LK+AL+ 
Sbjct: 215 PARLLRQPELKARNWQVLKQLKRALRQ 241


>gi|297565432|ref|YP_003684404.1| Uracil-DNA glycosylase superfamily [Meiothermus silvanus DSM 9946]
 gi|296849881|gb|ADH62896.1| Uracil-DNA glycosylase superfamily [Meiothermus silvanus DSM 9946]
          Length = 221

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 74/188 (39%), Gaps = 28/188 (14%)

Query: 99  TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158
            +         +M IG+ PS +D  +G+P++G +G + D++L      R  ++I+ +   
Sbjct: 18  PVAGAGNPDSPVMFIGHNPSGTDTQTGRPYTGPSGEIFDELLAQAGFSRDDVYITNLVKC 77

Query: 159 HPPGNRN-------LSNIEMEICRP-IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210
                 N        +  E++   P  +  +I++I PK ++ +G  T   F   D + T 
Sbjct: 78  WLWKEENGIKVNRTPTAKEIKSWVPAWLKPEIDIIQPKAIVCLGGPTAQHFLGKDFKITL 137

Query: 211 QNLGKWSNLCTP------HSIIP-----TLATVHPQELIQ--------YPLIKKNTWHAL 251
           Q  GKW  +            +P      +    P  LI         YP  + N    L
Sbjct: 138 QG-GKWLEVPPESPYLKLAGSLPSPKPLIMGIPQPSYLIHIREHSPESYPAARANMVADL 196

Query: 252 ITLKKALK 259
           + ++  L+
Sbjct: 197 LKVEAVLE 204


>gi|91790448|ref|YP_551400.1| phage SPO1 DNA polymerase-like protein [Polaromonas sp. JS666]
 gi|91699673|gb|ABE46502.1| phage SPO1 DNA polymerase-related protein [Polaromonas sp. JS666]
          Length = 260

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/248 (13%), Positives = 78/248 (31%), Gaps = 20/248 (8%)

Query: 19  YADSGVY-WVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSP-----LVQQADSIAQ 72
             + GV  W+   P+   T +++ +                +H P      V++    AQ
Sbjct: 13  LREMGVRVWLPQAPDRPVTVQAEVESAMDAVVPGAGLAGAAVHFPENRPVAVRERPVPAQ 72

Query: 73  KACSLHELKSLLRSFHD-CHLCSTSLSTICATQT--EGQDLMIIGYTPSDSDNISG-KPF 128
              +    ++  +           +   + A      G   +++  TP+ +       PF
Sbjct: 73  APQAPSAPRAEAQPGGGPVGWRVGAAQALYAEGAQAHGARWLVLAETPAAALQAEPFSPF 132

Query: 129 SGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188
            G  G +LD ML++  + +  + +              + ++  +             P 
Sbjct: 133 LGDAGKLLDNMLRAARLNQAGVVLLAPLVRLAASGSAAAGLQAALADL-----AAHALPD 187

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW 248
           ++L +G         +      +  G+  ++   +    T+ T     L++ P  K   W
Sbjct: 188 VVLVMGRLAAQAVLQSTEPL-GRLRGQVHSVLGAN----TVVTYDATYLLRNPADKAKAW 242

Query: 249 HALITLKK 256
             L    +
Sbjct: 243 EDLCLAMR 250


>gi|269125294|ref|YP_003298664.1| Uracil-DNA glycosylase superfamily [Thermomonospora curvata DSM
           43183]
 gi|268310252|gb|ACY96626.1| Uracil-DNA glycosylase superfamily [Thermomonospora curvata DSM
           43183]
          Length = 301

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/247 (14%), Positives = 66/247 (26%), Gaps = 48/247 (19%)

Query: 36  TYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCST 95
           T  +                 R   +   QQ   +A +A +L EL +       C     
Sbjct: 2   TASNAPFVPPGTGWPGDPATPRTPVAGTPQQVRELADQAPTLQELCARQSVCRACPRLVD 61

Query: 96  SL------------------STICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNM 135
                                 +     E   L+I+G  P+    N +G+ F+G ++G+ 
Sbjct: 62  WREQVALRRRRAFADQQYWGRPVPGWGQERPRLLIVGLAPAAHGGNRTGRIFTGDRSGDW 121

Query: 136 LDKMLQS-------------IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQI 182
           L   L                        +       PP     +  E   C P + R++
Sbjct: 122 LFASLHRTGLAELPTSVHAGDGQRLPDARMVATVRCAPP-ANKPTPAERTTCLPWLEREV 180

Query: 183 ELISP--KILLFIGNKTKNFF------FNNDAQKTYQNLGKWSNLCT------PHSIIPT 228
            L++P  ++++ +G                   +     G    +            +  
Sbjct: 181 ALVAPWVRVIVALGGYAWQGLWPVLRQVGYRIPRPRPAFGHGVEVELGPPAAAGPEPVTL 240

Query: 229 LATVHPQ 235
           L   HP 
Sbjct: 241 LGCYHPS 247


>gi|196229642|ref|ZP_03128506.1| Uracil-DNA glycosylase superfamily [Chthoniobacter flavus Ellin428]
 gi|196225968|gb|EDY20474.1| Uracil-DNA glycosylase superfamily [Chthoniobacter flavus Ellin428]
          Length = 206

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 64/178 (35%), Gaps = 15/178 (8%)

Query: 68  DSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127
              +     L EL   +     C LC        +       +MI+G  P   + + G+P
Sbjct: 2   PRPSAAQRRLDEL---VTHLRGCALCPKMHRPAVSGGPVLSKVMIVGQAPGTKEPVLGRP 58

Query: 128 FSGKTGNMLDKMLQSIEIM-----RTQIHISMISPWHP-----PGNRNLSNIEMEICRPI 177
           F+   G  L    +    M     R  I+++ +    P      G+R     E+  C   
Sbjct: 59  FAWTAGKTLFGWFEKACGMGEVEFRESIYMAAVCRCFPGKNATGGDRVPDAQEIATCSRW 118

Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
           +  +I+L+ P++L+ IG      F  +D     + +GK S +         +   HP 
Sbjct: 119 LEAEIKLLQPELLIPIGKLAIGQFIASDKL--TEIIGKKSRVTYHGHDFDIVPLPHPS 174


>gi|59800499|ref|YP_207211.1| hypothetical protein NGO0030 [Neisseria gonorrhoeae FA 1090]
 gi|59717394|gb|AAW88799.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
          Length = 245

 Score = 83.3 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 86/267 (32%), Gaps = 33/267 (12%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60
           M S R L   + L +   +              +        + +  +  Q         
Sbjct: 1   MLSARYLHLHEALGLGPMWL-------------KQAAAVLPPKNTPATPAQARPQTVRAA 47

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEG-------QDLMII 113
           +    Q  ++  +  ++  L++           + +     +              L ++
Sbjct: 48  TIRPSQPHNVQTRLETMKALETAAVHTRKPAPETETPPPGLSDGIAPVPAASGITKLAVV 107

Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173
              P   D + G+ F GK G +LD +L++  +    +H +        GN   S   +  
Sbjct: 108 SLCPPIEDAVYGQLFHGKAGILLDNILKAAGLDAAYVHKTCWVKTAAVGNPMPSEQAVAD 167

Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
               I R+++      +LF+G      F N + Q   + L             P     H
Sbjct: 168 ALGQIARELDGCRAPAVLFLG----QAFVNLERQAMIETL---------CGSRPFFIIDH 214

Query: 234 PQELIQYPLIKKNTWHALITLKKALKN 260
           P  L++ P +K   W  L  LK+AL+ 
Sbjct: 215 PARLLRQPELKARNWQVLKQLKRALRQ 241


>gi|218659232|ref|ZP_03515162.1| probable DNA-directed DNA polymerase protein (uracil-DNA
           glycosylase) [Rhizobium etli IE4771]
          Length = 142

 Score = 82.9 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 31/139 (22%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEP--NNEATYESQRKEKSIDSAIQ------- 51
           M S   LS  ++  +  F+AD+GV W+ +E   +  A +E+ +  +   SA Q       
Sbjct: 1   MISANDLSPAELAALLHFHADAGVEWLLEEEAVDRFAEFEAMKAARRPGSAQQDRPAAGE 60

Query: 52  ----------------------PITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHD 89
                                             VQQA  +A+ A SL ELK+ + +F+ 
Sbjct: 61  RPSVGERQTSPRPTAAARPAPASGPQPAIPDGEAVQQARFVAESARSLSELKTAVEAFNG 120

Query: 90  CHLCSTSLSTICATQTEGQ 108
           C+L  ++ STI A  T   
Sbjct: 121 CNLKHSARSTIFADATPKA 139


>gi|13541658|ref|NP_111346.1| Uracil-DNA glycosylase [Thermoplasma volcanium GSS1]
 gi|14325058|dbj|BAB59983.1| hypothetical protein [Thermoplasma volcanium GSS1]
          Length = 227

 Score = 82.9 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 67/222 (30%), Gaps = 38/222 (17%)

Query: 75  CSLHELKSLLRSFHDCHLCST-----------------SLSTICATQTEGQDLMIIGYTP 117
             + E+ S L     C    T                     +         L+I+G  P
Sbjct: 6   KDISEMNSDLIGCEKCPRLVTFRKEVAKRDKKFRGQEYWSRPVPGYGDISGRLLIVGLAP 65

Query: 118 SDS-DNISGKPFSGKT-GNMLDKMLQSIEIMRTQI-------------HISMISPWHPPG 162
           + +  N +G+ F+G    + L   L    I                  +I+      PP 
Sbjct: 66  AATGGNRTGRVFTGDKSSDFLVSCLFEAGITNQPTSVSRGDGLVYIDSYITAAVKCVPPD 125

Query: 163 NRNLSNIEMEICRPIIMRQIELIS-PKILLFIGNKTKNFFFNNDAQKTYQNLGK--WSNL 219
           N   +  E++ C P ++ +++ +   K++L +G    +   +          G       
Sbjct: 126 N-KPTMDEIKNCMPYLIFEVKQMKNLKVVLALGKIAFDSVLDVLRSFGTNTKGMKFVHGN 184

Query: 220 CTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
                    + + HP    +     K      ++L + +K L
Sbjct: 185 VYDTGTFKLVPSYHPSP--RNVNTGKLKREDFVSLLQKVKAL 224


>gi|288957595|ref|YP_003447936.1| DNA polymerase bacteriophage-type [Azospirillum sp. B510]
 gi|288909903|dbj|BAI71392.1| DNA polymerase bacteriophage-type [Azospirillum sp. B510]
          Length = 201

 Score = 82.9 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 55/181 (30%), Gaps = 32/181 (17%)

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP--------- 157
           G  L I+G  P   +   G+PF G++G +LD  L ++ I R +  ++ +           
Sbjct: 22  GPRLAIVGEAPGAEEARRGRPFVGRSGKLLDDSLAAVGIERAECLVANVFRHQPPGNKVG 81

Query: 158 -------------------WHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTK 198
                              W   G  +    +       +   +    P +++ +G    
Sbjct: 82  HFFSSRARARKEGREIDESWGAFGTSDRLLADFAGEIEHLRATLADYRPSVIVALGRTPT 141

Query: 199 NFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ-YPLIKKNTWHALITLKKA 257
                 +     Q  G+          +  + T HP  L++   + +      L      
Sbjct: 142 WALTGENG--ILQLRGRILPCRLLA-GVEVVPTFHPSYLLRGQLVEQPTFLADLRLAVSR 198

Query: 258 L 258
           L
Sbjct: 199 L 199


>gi|119509114|ref|ZP_01628265.1| Phage SPO1 DNA polymerase-related protein [Nodularia spumigena
           CCY9414]
 gi|119466280|gb|EAW47166.1| Phage SPO1 DNA polymerase-related protein [Nodularia spumigena
           CCY9414]
          Length = 92

 Score = 82.9 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 10/96 (10%)

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230
           M  C P ++ QI L+ PKI+L  G          D +   +  G+W            +A
Sbjct: 1   MAACIPYLLEQIRLVDPKIILLTGATAVKGITG-DKRGITKIRGQWLEWE----GRLCMA 55

Query: 231 TVHPQELIQYPLI-----KKNTWHALITLKKALKNL 261
             HP  L++ P       K   W  +  ++  L  L
Sbjct: 56  IFHPSYLLRNPSKEVGKPKWLMWQDIQAVRTKLDEL 91


>gi|288917968|ref|ZP_06412327.1| Uracil-DNA glycosylase superfamily [Frankia sp. EUN1f]
 gi|288350623|gb|EFC84841.1| Uracil-DNA glycosylase superfamily [Frankia sp. EUN1f]
          Length = 281

 Score = 82.9 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/244 (12%), Positives = 67/244 (27%), Gaps = 40/244 (16%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P++ A                    +  + +    +   +A  A     L + +     C
Sbjct: 7   PDDRAAGTGAGPAAPGTGWPNDPATVDTLVADTAGRVVELAATAADCAGLDARVSVCRAC 66

Query: 91  HLCSTSL------------------STICATQTEGQDLMIIGYTPSDS-DNISGKPFSG- 130
                                      + +       L+I+G  P+    N +G+ F+G 
Sbjct: 67  PRLVQWREEVAAVRRAAFADQPYWGRPVPSFGPPDARLLIVGLAPAAHGGNRTGRIFTGD 126

Query: 131 KTGNMLDKMLQSIEIMRTQIHISM-------------ISPWHPPGNRNLSNIEMEICRPI 177
           ++G+ L   L    + R    ++                   PP     +  E   CRP 
Sbjct: 127 RSGDWLFAALHRAGLARKPTSVASGDGQEMIDSRVVAAVRCAPP-ANKPTPDERNTCRPW 185

Query: 178 IMRQIELISP--KILLFIGNKTKNFF---FNNDAQKTYQNLGKW-SNLCTPHSIIPTLAT 231
           ++R ++L+ P  + ++ +G                        +   +    + +     
Sbjct: 186 LVRDLQLLRPTLRSIVVLGGFAWTALWPALRAAGYTLPPRRTPFGHGVTVDLAELRIFGC 245

Query: 232 VHPQ 235
            HP 
Sbjct: 246 YHPS 249


>gi|327311986|ref|YP_004338883.1| uracil-DNA glycosylase superfamily protein [Thermoproteus
           uzoniensis 768-20]
 gi|326948465|gb|AEA13571.1| uracil-DNA glycosylase superfamily protein [Thermoproteus
           uzoniensis 768-20]
          Length = 214

 Score = 82.5 bits (202), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 66/215 (30%), Gaps = 40/215 (18%)

Query: 77  LHELKSLLRSFHDCHL----------------CSTSLSTICATQTEGQDLMIIGYTPSDS 120
           + EL   L     C                   +     +         +M++G  P+  
Sbjct: 1   MEELLRALVQCRRCPRLVAYREGVPPLPKFAGQAYWRRPVPPWGDPKAKIMVVGLAPAAH 60

Query: 121 -DNISGKPFSGKTG-NMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRN 165
             N +G+ F+G +    L + L ++ +                  +I+      PPGN  
Sbjct: 61  GGNRTGRMFTGDSSAQFLFRALHAVGLSNHPYSVSRDDGTEVRCVYITSAVKCAPPGN-R 119

Query: 166 LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI 225
            +  E+  C P +  ++ L+ P+ ++ +G       F     +  +              
Sbjct: 120 PNAEELANCSPWLKAELSLVRPRAVVALGRVAWVAVFRALGSRPPEF---SHGAFADVGP 176

Query: 226 IPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
           +   A+ HP    +     +     L  L+  LK 
Sbjct: 177 VRVYASYHPSP--RNTNTGRL---DLEALEAVLKA 206


>gi|194097627|ref|YP_002000663.1| hypothetical protein NGK_0038 [Neisseria gonorrhoeae NCCP11945]
 gi|239998161|ref|ZP_04718085.1| hypothetical protein Ngon3_01563 [Neisseria gonorrhoeae 35/02]
 gi|240079924|ref|ZP_04724467.1| hypothetical protein NgonF_01216 [Neisseria gonorrhoeae FA19]
 gi|240112131|ref|ZP_04726621.1| hypothetical protein NgonM_00857 [Neisseria gonorrhoeae MS11]
 gi|240114877|ref|ZP_04728939.1| hypothetical protein NgonPID1_01248 [Neisseria gonorrhoeae PID18]
 gi|240117081|ref|ZP_04731143.1| hypothetical protein NgonPID_01233 [Neisseria gonorrhoeae PID1]
 gi|240122718|ref|ZP_04735674.1| hypothetical protein NgonP_02013 [Neisseria gonorrhoeae PID332]
 gi|254492939|ref|ZP_05106110.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|260441308|ref|ZP_05795124.1| hypothetical protein NgonDG_09540 [Neisseria gonorrhoeae DGI2]
 gi|268594013|ref|ZP_06128180.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268596066|ref|ZP_06130233.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268598191|ref|ZP_06132358.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268600536|ref|ZP_06134703.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|268602769|ref|ZP_06136936.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
 gi|268681318|ref|ZP_06148180.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|291044663|ref|ZP_06570372.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|293397771|ref|ZP_06641977.1| hypothetical protein NGNG_00761 [Neisseria gonorrhoeae F62]
 gi|193932917|gb|ACF28741.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945]
 gi|226511979|gb|EEH61324.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|268547402|gb|EEZ42820.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268549854|gb|EEZ44873.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268582322|gb|EEZ46998.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268584667|gb|EEZ49343.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|268586900|gb|EEZ51576.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
 gi|268621602|gb|EEZ54002.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|291011557|gb|EFE03553.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|291611717|gb|EFF40786.1| hypothetical protein NGNG_00761 [Neisseria gonorrhoeae F62]
 gi|317163452|gb|ADV06993.1| hypothetical protein NGTW08_0014 [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 245

 Score = 82.1 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 85/267 (31%), Gaps = 33/267 (12%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60
           M S R L   + L +   +              +        + +  +  Q         
Sbjct: 1   MLSARYLHLHEALGLGPMWL-------------KQAAAVLPPKNTPATPAQARPQTVRAA 47

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEG-------QDLMII 113
           +    Q  ++  +  ++  L++           + +     +              L ++
Sbjct: 48  TIRPSQPHNVQARLETMKALETAAVHTRKPAPETETPPPGLSDGIAPVPAASGITKLAVV 107

Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173
              P   D + G+ F GK G +LD +L++  +    +H +        GN   S   +  
Sbjct: 108 SLCPPIEDAVYGQLFHGKAGILLDNILKAAGLDAAYVHKTCWVKTAAVGNPMPSEQAVAD 167

Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
               I  +++      +LF+G      F N + Q   + L             P     H
Sbjct: 168 ALGQIAGELDGCRAPAVLFLG----QAFVNLERQAMIETL---------CGSRPFFIIDH 214

Query: 234 PQELIQYPLIKKNTWHALITLKKALKN 260
           P  L++ P +K   W  L  LK+AL+ 
Sbjct: 215 PARLLRQPELKARNWQVLKQLKRALRQ 241


>gi|120405411|ref|YP_955240.1| uracil-DNA glycosylase superfamily protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119958229|gb|ABM15234.1| Uracil-DNA glycosylase superfamily [Mycobacterium vanbaalenii
           PYR-1]
          Length = 284

 Score = 82.1 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 34/248 (13%), Positives = 69/248 (27%), Gaps = 44/248 (17%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P+           +            R   +       ++A  A SL +L + +     C
Sbjct: 10  PHPRTGDLFTSPVRPGSGWPGDPATRRTAVAATSADVVTMAAAARSLSQLDAEISVCRAC 69

Query: 91  HLCSTSLSTI------------------CATQTEGQDLMIIGYTPSDSD-NISGKPFSG- 130
                    +                      +    + ++G  P+    N +G+ F+G 
Sbjct: 70  PRLVQWREDVAVEKRRSYADQPYWGRPAPGFGSPRPRIFVVGLAPAAHGANRTGRVFTGD 129

Query: 131 KTGNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177
           ++G+ L   L              +  ++   I ++      PPGN   +  E   C P 
Sbjct: 130 RSGDFLFGSLYRTGLANQQTVTDSADGLVLNDIRVAAAVRCAPPGN-APTPAERSTCAPW 188

Query: 178 IMRQIELI--SPKILLFIGNKTKNFFFNNDA--------QKTYQNLGKWSNLCTPHSIIP 227
           +  +  L     ++++ +G                           G  + L TP   + 
Sbjct: 189 LDAEWRLTAGHVRVIVALGGFAWQVALAMIRRAGGAVGAPAPKFGHGVTATLQTPAGDVA 248

Query: 228 TLATVHPQ 235
            L   HP 
Sbjct: 249 LLGCYHPS 256


>gi|197118056|ref|YP_002138483.1| uracil-DNA glycosylase [Geobacter bemidjiensis Bem]
 gi|197087416|gb|ACH38687.1| uracil-DNA glycosylase [Geobacter bemidjiensis Bem]
          Length = 221

 Score = 81.7 bits (200), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 85/252 (33%), Gaps = 51/252 (20%)

Query: 11  QILTIALFYADSGVYWV-FDEPN---NEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQ 66
            +        +SGV  + F EP     E     Q      ++  Q              +
Sbjct: 13  SLKGYLAELLESGVDELTFGEPVAGEREKRAAVQAPTAPAEAFPQAPAPSAAPEPAAPVR 72

Query: 67  ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126
           A++  + A     L+                            L+ +         + G 
Sbjct: 73  AEASYRPAAPEDSLRV--------------------EGDPRARLLFV---------MHGS 103

Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186
            F+G+ G +L+K++ ++ + + Q+ +                   E  R  +  +I  ++
Sbjct: 104 GFAGEAGELLEKIVVAMGLGKEQVGLLSF-------------DSGEASRAAVAGRIAALA 150

Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKN 246
           P++++ +G +              +  G++ +L    S I  + T HP+ +++   +K++
Sbjct: 151 PEVVVSMGEEAT-ALLLQSEAPLQRLRGRFHDL----SGIALMPTHHPEAMLENQGLKRD 205

Query: 247 TWHALITLKKAL 258
            W+ +  +   L
Sbjct: 206 AWNDMQQVMGRL 217


>gi|57167872|ref|ZP_00367012.1| phage SPO1 DNA polymerase-related protein [Campylobacter coli
           RM2228]
 gi|305432102|ref|ZP_07401269.1| family 4 uracil-DNA glycosylase [Campylobacter coli JV20]
 gi|57020994|gb|EAL57658.1| phage SPO1 DNA polymerase-related protein [Campylobacter coli
           RM2228]
 gi|304445186|gb|EFM37832.1| family 4 uracil-DNA glycosylase [Campylobacter coli JV20]
          Length = 202

 Score = 81.7 bits (200), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 68/187 (36%), Gaps = 10/187 (5%)

Query: 73  KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
           K  +  +L+  ++    CH   +   T+   + +   LMI+      ++N  G   + K 
Sbjct: 25  KIENFKDLRKNIQECTLCHFSKSRCFTLMENEIKNASLMIVDTLAHKNENEKGVLLNSKK 84

Query: 133 GNMLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191
           G  L   L + + +   + + S +      G  +  +  ++ C P    ++EL+ PK++L
Sbjct: 85  GERLKFYLKEILGLCEKEFYFSYLFKCFSNGKFDDFS--LQSCLPFFWNELELVQPKMIL 142

Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
            +G                   G+             +A+   + + + P  +K     L
Sbjct: 143 CLGEYPFKSL---GFSDFNALRGEIFAY----KNFFIMASFELEFIEKNPSCEKIFIQDL 195

Query: 252 ITLKKAL 258
             +K  L
Sbjct: 196 KKIKGFL 202


>gi|111225573|ref|YP_716367.1| Uracil-DNA glycosylase [Frankia alni ACN14a]
 gi|111153105|emb|CAJ64852.1| Uracil-DNA glycosylase [Frankia alni ACN14a]
          Length = 274

 Score = 81.7 bits (200), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 33/242 (13%), Positives = 68/242 (28%), Gaps = 42/242 (17%)

Query: 35  ATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCS 94
                +   +        + +     +    Q   +A  A    EL + +     C    
Sbjct: 2   TAGPRRDPARPGAGWPGDLADPTTPVAASCAQVRELAAGAADTGELDARVSVCRACPRLV 61

Query: 95  TSL------------------STICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGN 134
           T                      + +       ++I+G  P+    N +G+ F+G ++G+
Sbjct: 62  TWREEVAAVRRAAYADQPYWGRPVSSFGPADARILIVGLAPAAHGGNRTGRIFTGDRSGD 121

Query: 135 MLDKMLQS-------------IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ 181
            L   L                        I       PP     +  E + CRP ++R 
Sbjct: 122 WLFASLHRVGLAALATSQAAGDGQSLRATRIVAAVRCAPP-ANKPTTAERDACRPWLVRD 180

Query: 182 IELISP--KILLFIGNKTKNFF------FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
           +EL+ P  ++++ +G                         G  +    P + +  +   H
Sbjct: 181 LELVRPTLRVVVVLGGFAWAALWPALARAGYSVPAPRVRFGHGARAELPGTGVRVVGCYH 240

Query: 234 PQ 235
           P 
Sbjct: 241 PS 242


>gi|158312667|ref|YP_001505175.1| uracil-DNA glycosylase superfamily protein [Frankia sp. EAN1pec]
 gi|158108072|gb|ABW10269.1| Uracil-DNA glycosylase superfamily [Frankia sp. EAN1pec]
          Length = 262

 Score = 81.7 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 65/230 (28%), Gaps = 40/230 (17%)

Query: 45  SIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL------- 97
                           +    +  ++A  A    EL + +     C              
Sbjct: 4   PGSGWPGDPAVPGTPVARSGPEVATLAGTAPDCDELDARISVCRACPRLVEWREEVAAVR 63

Query: 98  -----------STICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQS-- 142
                        + +        +I+G  P+    N +G+ F+G ++G+ L   L    
Sbjct: 64  RAAFADQPYWGRPVPSFGPADARTLIVGLAPAAHGGNRTGRIFTGDRSGDWLFAALHRAG 123

Query: 143 -----------IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189
                           T   +  +    PP     +  E + CRP ++R++EL+ P  + 
Sbjct: 124 LAALGTSVSAGDGQRMTGARVVAVVRCAPP-ANKPTPTERDTCRPWLVRELELLRPALRS 182

Query: 190 LLFIGNKTKNFF---FNNDAQKTYQNLGKW-SNLCTPHSIIPTLATVHPQ 235
           ++ +G    +            T      +   +      +  L   HP 
Sbjct: 183 IVVLGGFAWSALWPALARAGYPTPARRVPFGHGVTADAGPVRVLGCYHPS 232


>gi|240124908|ref|ZP_04737794.1| hypothetical protein NgonSK_01562 [Neisseria gonorrhoeae SK-92-679]
 gi|268683489|ref|ZP_06150351.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|268623773|gb|EEZ56173.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
          Length = 245

 Score = 81.7 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 85/267 (31%), Gaps = 33/267 (12%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60
           M S R L   + L +   +              +        + +  +  Q         
Sbjct: 1   MLSTRYLHLHEALGLGPMWL-------------KQAAAVLPPKNTPATPAQARPQTVRAA 47

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEG-------QDLMII 113
           +    Q  ++  +  ++  L++           + +     +              L ++
Sbjct: 48  TIRPSQPHNVQARLETMKALETAAVHTRKPAPETETPPPGLSDGIAPVPAASGITKLAVV 107

Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173
              P   D + G+ F GK G +LD +L++  +    +H +        GN   S   +  
Sbjct: 108 SLCPPIEDAVYGQLFHGKAGILLDNILKAAGLDAAYVHKTCWVKTAAVGNPMPSEQAVAD 167

Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
               I  +++      +LF+G      F N + Q   + L             P     H
Sbjct: 168 ALGQIAGELDGCRAPAVLFLG----QAFVNLERQAMIETL---------CGSRPFFIIDH 214

Query: 234 PQELIQYPLIKKNTWHALITLKKALKN 260
           P  L++ P +K   W  L  LK+AL+ 
Sbjct: 215 PARLLRQPELKARNWQVLKQLKRALRQ 241


>gi|227878843|ref|ZP_03996750.1| uracil-DNA glycosylase [Lactobacillus crispatus JV-V01]
 gi|256849817|ref|ZP_05555248.1| DNA polymerase [Lactobacillus crispatus MV-1A-US]
 gi|262046938|ref|ZP_06019898.1| DNA polymerase [Lactobacillus crispatus MV-3A-US]
 gi|227861591|gb|EEJ69203.1| uracil-DNA glycosylase [Lactobacillus crispatus JV-V01]
 gi|256713306|gb|EEU28296.1| DNA polymerase [Lactobacillus crispatus MV-1A-US]
 gi|260572920|gb|EEX29480.1| DNA polymerase [Lactobacillus crispatus MV-3A-US]
          Length = 219

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 58/182 (31%), Gaps = 31/182 (17%)

Query: 104 QTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP--- 160
             +   LMI+G  P  ++ ++  PFSG  G  LDK L+ I + R Q++I+      P   
Sbjct: 28  GPQHPLLMIVGEAPGRNEIVNNIPFSGDAGKELDKSLKQIGLTRDQVYITSAVRSRPFAI 87

Query: 161 --------------PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206
                           NR  +  E+    P +  +IE   PK+++ +GN           
Sbjct: 88  KKVFSKRENKEVIKYPNRKPTKKEILAHAPFLDFEIEYAQPKLIVALGNTGLERLLG-SG 146

Query: 207 QKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253
            K     G+                              HP  +     +  +       
Sbjct: 147 HKISAEHGQVIKNTPILRLNETKDGYIWSKERYTIFPEYHPAAVFYNRKLTDDIIKDWDK 206

Query: 254 LK 255
           +K
Sbjct: 207 IK 208


>gi|240013343|ref|ZP_04720256.1| hypothetical protein NgonD_01610 [Neisseria gonorrhoeae DGI18]
 gi|240015788|ref|ZP_04722328.1| hypothetical protein NgonFA_01235 [Neisseria gonorrhoeae FA6140]
 gi|240120416|ref|ZP_04733378.1| hypothetical protein NgonPI_01295 [Neisseria gonorrhoeae PID24-1]
          Length = 245

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 84/267 (31%), Gaps = 33/267 (12%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60
           M S R L   + L +   +              +        + +  +  Q         
Sbjct: 1   MLSARYLHLHEALGLGPMWL-------------KQAAAVLPPKNTPATPAQARPQTVRAA 47

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEG-------QDLMII 113
           +    Q  ++  +  ++  L++           + +     +              L ++
Sbjct: 48  TIRPSQPHNVQARLETMKALETAAVHTRKPAPETETPPPGLSDGIAPVPAASGITKLAVV 107

Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173
              P   D + G+ F GK G +LD +L++  +    +H +        GN   S   +  
Sbjct: 108 SLCPPIEDAVYGQLFHGKAGILLDNILKAAGLDAAYVHKTCWVKTAAVGNPMPSEQAVAD 167

Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
               I  +++       LF+G      F N + Q   + L             P     H
Sbjct: 168 ALGQIAGELDGCRAPAALFLG----QAFVNLERQAMIETL---------CGSRPFFIIDH 214

Query: 234 PQELIQYPLIKKNTWHALITLKKALKN 260
           P  L++ P +K   W  L  LK+AL+ 
Sbjct: 215 PARLLRQPELKARNWQVLKQLKRALRQ 241


>gi|328465678|gb|EGF36892.1| DNA polymerase [Lactobacillus helveticus MTCC 5463]
          Length = 185

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 58/180 (32%), Gaps = 31/180 (17%)

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------- 162
           MI+G  P  ++ ++  PFSG  G  LDK L+ I + R Q++I+      P          
Sbjct: 1   MIVGEAPGRNEIVNNIPFSGDAGKELDKSLKQIGLSRDQVYITSAVRSRPFSVKKVFSKR 60

Query: 163 ---------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL 213
                    NR  +  E+    P +  +I    P+I++ +GN            K     
Sbjct: 61  ENKEVIKRPNRKPTKKEVLAHAPFLDYEISYADPQIIVALGNTGLERLLGP-GHKISAEH 119

Query: 214 GKWSN-------------LCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
           GK  +                       +   HP  +     +  +       +K  +  
Sbjct: 120 GKVIDNIPILELNTAKDGYVWSKKKYTVIPEYHPAAVFYNRKLSDDIVKDWEVIKPYIDK 179


>gi|325267816|ref|ZP_08134466.1| hypothetical protein HMPREF9098_2194 [Kingella denitrificans ATCC
           33394]
 gi|324980697|gb|EGC16359.1| hypothetical protein HMPREF9098_2194 [Kingella denitrificans ATCC
           33394]
          Length = 237

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 85/262 (32%), Gaps = 33/262 (12%)

Query: 1   MTSKRILSQEQILTI--ALFYADSGVYWVFDEPNNEA-TYESQRKEKSIDSAIQPITNIR 57
           M   R +   + L +     +  + V      P   A T     +++ +         I 
Sbjct: 1   MLDTRYVHLHEALGLGALWLHKTAKVLPPVSAPETAAQTAPPPLQKQPVPPVRDNAPPIH 60

Query: 58  HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117
           H H     Q ++ AQ A    E                  +   A       ++++    
Sbjct: 61  HAHPQPEPQPETAAQPASQPAE----------------RSNISWAEPPRPARVLVLSVCA 104

Query: 118 SDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177
           S  D +  K FSG+ G +L KML +I++    +H S         N N    E++     
Sbjct: 105 SLEDRMRQKLFSGEDGALLHKMLAAIQLSPQDVHCSTWLKQSAHFNPNPGEEEVQAAWAD 164

Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237
           + ++ +      L  +G+                      +     +  P   T HP  L
Sbjct: 165 VYQEWQQCGRPPLWLLGDF--------------FEREDVRHCLQQCAPTPYFVTSHPLRL 210

Query: 238 IQYPLIKKNTWHALITLKKALK 259
           ++YP +K+  W  L  LK  L 
Sbjct: 211 LKYPQLKRAAWDTLQQLKAELD 232


>gi|215426571|ref|ZP_03424490.1| hypothetical protein MtubT9_09322 [Mycobacterium tuberculosis T92]
 gi|215430141|ref|ZP_03428060.1| hypothetical protein MtubE_05558 [Mycobacterium tuberculosis
           EAS054]
 gi|219557154|ref|ZP_03536230.1| hypothetical protein MtubT1_07565 [Mycobacterium tuberculosis T17]
 gi|260200309|ref|ZP_05767800.1| hypothetical protein MtubT4_09303 [Mycobacterium tuberculosis T46]
 gi|260204512|ref|ZP_05772003.1| hypothetical protein MtubK8_09418 [Mycobacterium tuberculosis K85]
 gi|297730794|ref|ZP_06959912.1| hypothetical protein MtubKR_06869 [Mycobacterium tuberculosis KZN
           R506]
 gi|306781660|ref|ZP_07419997.1| hypothetical protein TMBG_01348 [Mycobacterium tuberculosis
           SUMu002]
 gi|306783979|ref|ZP_07422301.1| hypothetical protein TMCG_00889 [Mycobacterium tuberculosis
           SUMu003]
 gi|306792669|ref|ZP_07430971.1| hypothetical protein TMEG_01155 [Mycobacterium tuberculosis
           SUMu005]
 gi|306797076|ref|ZP_07435378.1| hypothetical protein TMFG_02449 [Mycobacterium tuberculosis
           SUMu006]
 gi|306802956|ref|ZP_07439624.1| hypothetical protein TMHG_00443 [Mycobacterium tuberculosis
           SUMu008]
 gi|306967345|ref|ZP_07480006.1| hypothetical protein TMIG_02933 [Mycobacterium tuberculosis
           SUMu009]
 gi|308231795|ref|ZP_07663937.1| hypothetical protein TMAG_01891 [Mycobacterium tuberculosis
           SUMu001]
 gi|308371920|ref|ZP_07667270.1| hypothetical protein TMDG_01137 [Mycobacterium tuberculosis
           SUMu004]
 gi|308378886|ref|ZP_07668852.1| hypothetical protein TMJG_03901 [Mycobacterium tuberculosis
           SUMu010]
 gi|308380026|ref|ZP_07669104.1| hypothetical protein TMKG_01756 [Mycobacterium tuberculosis
           SUMu011]
 gi|308399297|ref|ZP_07669391.1| hypothetical protein TMLG_02594 [Mycobacterium tuberculosis
           SUMu012]
 gi|308216047|gb|EFO75446.1| hypothetical protein TMAG_01891 [Mycobacterium tuberculosis
           SUMu001]
 gi|308325621|gb|EFP14472.1| hypothetical protein TMBG_01348 [Mycobacterium tuberculosis
           SUMu002]
 gi|308331215|gb|EFP20066.1| hypothetical protein TMCG_00889 [Mycobacterium tuberculosis
           SUMu003]
 gi|308335031|gb|EFP23882.1| hypothetical protein TMDG_01137 [Mycobacterium tuberculosis
           SUMu004]
 gi|308338839|gb|EFP27690.1| hypothetical protein TMEG_01155 [Mycobacterium tuberculosis
           SUMu005]
 gi|308342524|gb|EFP31375.1| hypothetical protein TMFG_02449 [Mycobacterium tuberculosis
           SUMu006]
 gi|308350330|gb|EFP39181.1| hypothetical protein TMHG_00443 [Mycobacterium tuberculosis
           SUMu008]
 gi|308354960|gb|EFP43811.1| hypothetical protein TMIG_02933 [Mycobacterium tuberculosis
           SUMu009]
 gi|308358907|gb|EFP47758.1| hypothetical protein TMJG_03901 [Mycobacterium tuberculosis
           SUMu010]
 gi|308362870|gb|EFP51721.1| hypothetical protein TMKG_01756 [Mycobacterium tuberculosis
           SUMu011]
 gi|308366536|gb|EFP55387.1| hypothetical protein TMLG_02594 [Mycobacterium tuberculosis
           SUMu012]
 gi|323720216|gb|EGB29315.1| hypothetical protein TMMG_01954 [Mycobacterium tuberculosis
           CDC1551A]
          Length = 275

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 68/230 (29%), Gaps = 37/230 (16%)

Query: 42  KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL---- 97
             +            +   +    Q  ++A  A S+ EL +L+     C    +      
Sbjct: 19  PVEPGSGWPGDPATPQTPVAADAAQVSALAGGAGSICELNALISVCRACPRLVSWREEVA 78

Query: 98  --------------STICATQTEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKMLQ 141
                           +    ++   L+I+G  P+    N +G+ F+G ++G+ L   L 
Sbjct: 79  VVKRRAFADQPYWGRPVPGWGSKRPRLLILGLAPAAHGANRTGRMFTGDRSGDQLYAALH 138

Query: 142 -------------SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE--LIS 186
                        +  +   +I I+      PPGN   +  E   C P +  +       
Sbjct: 139 RAGLVNSPVSVDAADGLRANRIRITAPVRCAPPGNS-PTPAERLTCSPWLNAEWRLVSDH 197

Query: 187 PKILLFIGNKTKNFFFNNDAQKTY-QNLGKWSNLCTPHSIIPTLATVHPQ 235
            + ++ +G                 +       +    + +  L   HP 
Sbjct: 198 IRAIVALGGFAWQVALRLAGASGTPKPRFGHGVVTELGAGVRLLGCYHPS 247


>gi|15840705|ref|NP_335742.1| hypothetical protein MT1297.1 [Mycobacterium tuberculosis CDC1551]
 gi|308375416|ref|ZP_07668016.1| hypothetical protein TMGG_01821 [Mycobacterium tuberculosis
           SUMu007]
 gi|54040069|sp|P64786|Y1289_MYCBO RecName: Full=Uncharacterized protein Mb1289
 gi|54042500|sp|P64785|Y1259_MYCTU RecName: Full=Uncharacterized protein Rv1259/MT1297.1
 gi|13880894|gb|AAK45556.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|308346389|gb|EFP35240.1| hypothetical protein TMGG_01821 [Mycobacterium tuberculosis
           SUMu007]
          Length = 268

 Score = 80.6 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 68/230 (29%), Gaps = 37/230 (16%)

Query: 42  KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL---- 97
             +            +   +    Q  ++A  A S+ EL +L+     C    +      
Sbjct: 12  PVEPGSGWPGDPATPQTPVAADAAQVSALAGGAGSICELNALISVCRACPRLVSWREEVA 71

Query: 98  --------------STICATQTEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKMLQ 141
                           +    ++   L+I+G  P+    N +G+ F+G ++G+ L   L 
Sbjct: 72  VVKRRAFADQPYWGRPVPGWGSKRPRLLILGLAPAAHGANRTGRMFTGDRSGDQLYAALH 131

Query: 142 -------------SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE--LIS 186
                        +  +   +I I+      PPGN   +  E   C P +  +       
Sbjct: 132 RAGLVNSPVSVDAADGLRANRIRITAPVRCAPPGNS-PTPAERLTCSPWLNAEWRLVSDH 190

Query: 187 PKILLFIGNKTKNFFFNNDAQKTY-QNLGKWSNLCTPHSIIPTLATVHPQ 235
            + ++ +G                 +       +    + +  L   HP 
Sbjct: 191 IRAIVALGGFAWQVALRLAGASGTPKPRFGHGVVTELGAGVRLLGCYHPS 240


>gi|108805734|ref|YP_645671.1| uracil-DNA glycosylase superfamily protein [Rubrobacter
           xylanophilus DSM 9941]
 gi|108766977|gb|ABG05859.1| Uracil-DNA glycosylase superfamily [Rubrobacter xylanophilus DSM
           9941]
          Length = 228

 Score = 80.6 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 59/202 (29%), Gaps = 36/202 (17%)

Query: 67  ADSIAQKACSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQ 108
             S      SL  L+  + S   C                           +        
Sbjct: 2   PSSSTATGRSLAALEREVVSCRRCPRLVAWREEVARTKRAAYASETYWGRPVPGFGDPAA 61

Query: 109 DLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKMLQSIEIMRTQI-------------HIS 153
            ++I+G  P+    N +G+ F+G ++G+ L   L                        I+
Sbjct: 62  RVVILGLAPAAHGANRTGRFFTGDRSGDFLFAALHRAGFASMPTSRSTDDGLRLEGAWIT 121

Query: 154 MISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL 213
                 PP N   +  E + C P   R++EL++P+ ++ +G    +        +     
Sbjct: 122 AAVRCAPPQN-RPTPQERDACLPYAARELELLAPRAVVCLGAFAWDAALRILGVRPKPRF 180

Query: 214 GKWSNLCTPHSIIPTLATVHPQ 235
           G           +  L   HP 
Sbjct: 181 G--HGAEHRAGNLTLLGCYHPS 200


>gi|319638976|ref|ZP_07993734.1| uracil-DNA glycosylase, family 4 [Neisseria mucosa C102]
 gi|317399880|gb|EFV80543.1| uracil-DNA glycosylase, family 4 [Neisseria mucosa C102]
          Length = 253

 Score = 80.6 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/268 (16%), Positives = 88/268 (32%), Gaps = 25/268 (9%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDS-AIQPITNIRHI 59
           M S R L   + L +   + +     +   P         +   +  + A++ ++   H 
Sbjct: 1   MLSSRYLHLHEALGLGPMWLNRNAKIIHVAPQAATAPVRPKTIATDTAQAVRTLSAGAHQ 60

Query: 60  HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD-------LMI 112
                      A+ A  + E  +  ++       + +     +      D       +M+
Sbjct: 61  ARTAAIATAQTAKPAVRVPE--AAPKAIAKTP--AKTEKAAHSDNLPRLDVTIRPSEIMV 116

Query: 113 IGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEME 172
           +   PS  D++ G  FSG  G +LD +L +I +   Q H +      P          + 
Sbjct: 117 VSICPSTEDSLHGTLFSGNVGTLLDNILAAIGLKPEQAHKTAWVKTAPVFTALPDAEHVR 176

Query: 173 ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATV 232
                +  ++     + +LF+G              +   +G  + LC      P     
Sbjct: 177 AELAEMQNELTASQARAVLFLGKI----------FDSPDMIGLMNELC---GKRPHFVIP 223

Query: 233 HPQELIQYPLIKKNTWHALITLKKALKN 260
           HP  L+  P +K   W  L  LK+ L  
Sbjct: 224 HPARLLMQPQLKAQAWQILKPLKQLLAK 251


>gi|328957376|ref|YP_004374762.1| uracil-DNA glycosylase superfamily [Carnobacterium sp. 17-4]
 gi|328673700|gb|AEB29746.1| uracil-DNA glycosylase superfamily [Carnobacterium sp. 17-4]
          Length = 213

 Score = 80.2 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 64/206 (31%), Gaps = 37/206 (17%)

Query: 91  HLCSTSLS------TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIE 144
            L             +          +++G  P +++ ++G PFSG+ G  L +  + +E
Sbjct: 8   ELAKKRSQEFSVEGFVYGQGPINPKFLLVGEAPGETEAVNGIPFSGRAGKELMRFFELLE 67

Query: 145 IMRTQIHISMISPWHPP-----------------GNRNLSNIEMEICRPIIMRQIELISP 187
           + RT+++I+      P                   NR  +  E+    P++  ++E I  
Sbjct: 68  VDRTEVYITSAFRSRPYRYKEKMDRKTKQLVYRKYNRPPTKQELIAHAPLLDYEVETIQT 127

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWS-------------NLCTPHSIIPTLATVHP 234
             +L +GN            K  +  GK                            T HP
Sbjct: 128 PYILTMGNIGLQRLLGPK-MKVSEQHGKLYHGPVMCLASSEDDTYTWTEKHYAVFPTFHP 186

Query: 235 QELIQYPLIKKNTWHALITLKKALKN 260
             +     + +     L   KK +  
Sbjct: 187 ASIFYNRGLVETIHEDLAQFKKLINK 212


>gi|322419021|ref|YP_004198244.1| uracil-DNA glycosylase superfamily protein [Geobacter sp. M18]
 gi|320125408|gb|ADW12968.1| Uracil-DNA glycosylase superfamily [Geobacter sp. M18]
          Length = 198

 Score = 80.2 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 78/257 (30%), Gaps = 63/257 (24%)

Query: 2   TSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHS 61
             +R L    +       ADSGV  +                    +             
Sbjct: 1   MEERELLLRSLRGYLTDLADSGVDDL--------------------AFGAETPVAAAEPP 40

Query: 62  PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121
             V    ++A +A  L              LC                L+ +        
Sbjct: 41  ARVAPGAALAPEASDLE------------PLCRQ-------EGNPRARLLFL-------- 73

Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ 181
            ++G  F    G +L +++ +++    Q+ +              S  +    R  I R+
Sbjct: 74  -MTGSGFQSAGGELLARIIAAMKFQPDQVCLLSF----------DSGEDAAALRFAIGRR 122

Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241
           I  ++P++++ +G +       +      +  G++  +         + T+HP+ L+   
Sbjct: 123 IGALAPEVVVTLGEEAT-SLLLDGQTSLDRVRGRFQEVQGRG----VMPTLHPELLLADE 177

Query: 242 LIKKNTWHALITLKKAL 258
            +K++ W  +  +   L
Sbjct: 178 TLKRHVWEDMKKVMHRL 194


>gi|15608399|ref|NP_215775.1| hypothetical protein Rv1259 [Mycobacterium tuberculosis H37Rv]
 gi|31792450|ref|NP_854943.1| hypothetical protein Mb1289 [Mycobacterium bovis AF2122/97]
 gi|121637186|ref|YP_977409.1| hypothetical protein BCG_1317 [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|148661046|ref|YP_001282569.1| hypothetical protein MRA_1267 [Mycobacterium tuberculosis H37Ra]
 gi|148822475|ref|YP_001287230.1| hypothetical protein TBFG_11285 [Mycobacterium tuberculosis F11]
 gi|167969582|ref|ZP_02551859.1| hypothetical protein MtubH3_16791 [Mycobacterium tuberculosis
           H37Ra]
 gi|215403098|ref|ZP_03415279.1| hypothetical protein Mtub0_05261 [Mycobacterium tuberculosis
           02_1987]
 gi|215410894|ref|ZP_03419702.1| hypothetical protein Mtub9_06085 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215445437|ref|ZP_03432189.1| hypothetical protein MtubT_05663 [Mycobacterium tuberculosis T85]
 gi|224989661|ref|YP_002644348.1| hypothetical protein JTY_1292 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253799696|ref|YP_003032697.1| hypothetical protein TBMG_02722 [Mycobacterium tuberculosis KZN
           1435]
 gi|254231515|ref|ZP_04924842.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|254364156|ref|ZP_04980202.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254550266|ref|ZP_05140713.1| hypothetical protein Mtube_07369 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260186192|ref|ZP_05763666.1| hypothetical protein MtubCP_09208 [Mycobacterium tuberculosis
           CPHL_A]
 gi|289442694|ref|ZP_06432438.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289446849|ref|ZP_06436593.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289554953|ref|ZP_06444163.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
 gi|289569265|ref|ZP_06449492.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289573918|ref|ZP_06454145.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289745003|ref|ZP_06504381.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289749801|ref|ZP_06509179.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289753330|ref|ZP_06512708.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289757356|ref|ZP_06516734.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|294994815|ref|ZP_06800506.1| hypothetical protein Mtub2_09972 [Mycobacterium tuberculosis 210]
 gi|297633808|ref|ZP_06951588.1| hypothetical protein MtubK4_06784 [Mycobacterium tuberculosis KZN
           4207]
 gi|298524761|ref|ZP_07012170.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|313658126|ref|ZP_07815006.1| hypothetical protein MtubKV_06884 [Mycobacterium tuberculosis KZN
           V2475]
 gi|3261594|emb|CAB00912.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|31618039|emb|CAD94150.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121492833|emb|CAL71304.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|124600574|gb|EAY59584.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|134149670|gb|EBA41715.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148505198|gb|ABQ73007.1| hypothetical protein MRA_1267 [Mycobacterium tuberculosis H37Ra]
 gi|148721002|gb|ABR05627.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|224772774|dbj|BAH25580.1| hypothetical protein JTY_1292 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253321200|gb|ACT25803.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
           1435]
 gi|289415613|gb|EFD12853.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289419807|gb|EFD17008.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289439585|gb|EFD22078.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
 gi|289538349|gb|EFD42927.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289543019|gb|EFD46667.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289685531|gb|EFD53019.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289690388|gb|EFD57817.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289693917|gb|EFD61346.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289712920|gb|EFD76932.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298494555|gb|EFI29849.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|326902881|gb|EGE49814.1| hypothetical protein TBPG_00735 [Mycobacterium tuberculosis W-148]
 gi|328459443|gb|AEB04866.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
           4207]
          Length = 299

 Score = 79.8 bits (195), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 68/230 (29%), Gaps = 37/230 (16%)

Query: 42  KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL---- 97
             +            +   +    Q  ++A  A S+ EL +L+     C    +      
Sbjct: 43  PVEPGSGWPGDPATPQTPVAADAAQVSALAGGAGSICELNALISVCRACPRLVSWREEVA 102

Query: 98  --------------STICATQTEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKMLQ 141
                           +    ++   L+I+G  P+    N +G+ F+G ++G+ L   L 
Sbjct: 103 VVKRRAFADQPYWGRPVPGWGSKRPRLLILGLAPAAHGANRTGRMFTGDRSGDQLYAALH 162

Query: 142 -------------SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE--LIS 186
                        +  +   +I I+      PPGN   +  E   C P +  +       
Sbjct: 163 RAGLVNSPVSVDAADGLRANRIRITAPVRCAPPGNS-PTPAERLTCSPWLNAEWRLVSDH 221

Query: 187 PKILLFIGNKTKNFFFNNDAQKTY-QNLGKWSNLCTPHSIIPTLATVHPQ 235
            + ++ +G                 +       +    + +  L   HP 
Sbjct: 222 IRAIVALGGFAWQVALRLAGASGTPKPRFGHGVVTELGAGVRLLGCYHPS 271


>gi|326387655|ref|ZP_08209261.1| hypothetical protein Y88_0568 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326207701|gb|EGD58512.1| hypothetical protein Y88_0568 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 258

 Score = 79.8 bits (195), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 79/242 (32%), Gaps = 18/242 (7%)

Query: 10  EQILTIALFYADSGVYW-VFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQA- 67
             I     ++ D+GV     DEP +     + +  K +  +               + A 
Sbjct: 20  AAINAALQWWHDAGVDCDFADEPQDWLAASNPKPVKPLTKSAAKAPEAVTKTIGGGRSAW 79

Query: 68  -DSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126
             ++A+       L           L       +     E   LM+I   P   ++    
Sbjct: 80  PATLAEFVPWW--LSEA-------SLAPAGAVRMAPVGPETPPLMVIVPMP--EESDRET 128

Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186
             +G  GN+LD  L +  + R +I+++   P            +  +    I   + LI 
Sbjct: 129 LLAGPIGNLLDGFLAAAGLSRAEIYLASALPARVAAPDWADLAKQGLGDL-IAHHVGLIR 187

Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKN 246
           P+ L+  G    +    ND+  T         +    + IP L+    + ++  P +K  
Sbjct: 188 PERLILFGQSGISTLLGNDSPNTCW---HLRPIYQGDAGIPVLSAYDLETMVARPALKAK 244

Query: 247 TW 248
            W
Sbjct: 245 LW 246


>gi|86742598|ref|YP_482998.1| uracil-DNA glycosylase superfamily protein [Frankia sp. CcI3]
 gi|86569460|gb|ABD13269.1| Uracil-DNA glycosylase superfamily [Frankia sp. CcI3]
          Length = 271

 Score = 79.8 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/235 (13%), Positives = 69/235 (29%), Gaps = 42/235 (17%)

Query: 42  KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL---- 97
             +        +       +    +  ++A  A    EL + +     C    T      
Sbjct: 6   PVRPGSGWPGDLAAADTPVAATPGEVRALAADATGTRELDARMSVCRACPRLVTWREEVA 65

Query: 98  --------------STICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQ 141
                           + +       +++IG  P+    N +G+ F+G ++G+ L   L 
Sbjct: 66  AVRRAAFAEQAYWGRPVPSFGPGDARILVIGLAPAAHGGNRTGRIFTGDRSGDWLFASLH 125

Query: 142 S-------------IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR--QIELIS 186
                              T   I  +    PP     +  E + CRP ++R  ++   +
Sbjct: 126 RVGLAALPTSVSAGDGQRLTATRIVAVVRCAPP-ANKPTTTERDTCRPWLVRDLELVRST 184

Query: 187 PKILLFIGNKTKNFF------FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
            ++++ +G    +                  + G    +  P S +  +   HP 
Sbjct: 185 LRVIVVLGGFAWSALWPALVQAGFPVPPRRVSFGHGVRVELPVSGVSVVGCYHPS 239


>gi|320161391|ref|YP_004174615.1| uracil-DNA glycosylase [Anaerolinea thermophila UNI-1]
 gi|319995244|dbj|BAJ64015.1| uracil-DNA glycosylase [Anaerolinea thermophila UNI-1]
          Length = 230

 Score = 79.4 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 62/202 (30%), Gaps = 40/202 (19%)

Query: 73  KACSLHELKSLLRSFHDCHL--------CSTSLS----------TICATQTEGQDLMIIG 114
              +L EL   L     C            T              +        ++MIIG
Sbjct: 3   PENALQELNHALVQCKRCERLTHWREHIAQTRKKAHRDEVYWGKPVPGFGDPHAEVMIIG 62

Query: 115 YTPSDSD-NISGKPFSGK-TGNMLDKMLQSIEIMRTQI-------------HISMISPWH 159
             P     N +G+ F+G  +G+ L   L                       +I+ I    
Sbjct: 63  LAPGAHGSNRTGRMFTGDSSGHFLYAALYRAGFANQPHSHALYDGLTLRRVYITAICRCV 122

Query: 160 PPGNRNLSNIEMEICRPIIMRQIE-LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS- 217
           PP N   +  E++ CRP + ++I      K  + +GN    +      Q    +  +W  
Sbjct: 123 PPDN-KPTPQEIQNCRPYLEQEIALFPQLKGFVALGNYAFQWLVQWYRQHGENDTREWQF 181

Query: 218 ----NLCTPHSIIPTLATVHPQ 235
                    + +   LA+ HP 
Sbjct: 182 AHNAFYAPRNGLPWLLASYHPS 203


>gi|118619593|ref|YP_907925.1| hypothetical protein MUL_4483 [Mycobacterium ulcerans Agy99]
 gi|118571703|gb|ABL06454.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
          Length = 275

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 32/247 (12%), Positives = 67/247 (27%), Gaps = 39/247 (15%)

Query: 25  YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLL 84
             V   P            +          + +   +    +   +A +A S+ EL + +
Sbjct: 4   DRVLTHP--RTGQPFGSPVRPGTGWPGDPASSQTPVAAEAARVAELAGRAGSIAELDAAI 61

Query: 85  RSFHDCHLCSTSL------------------STICATQTEGQDLMIIGYTPSDSD-NISG 125
                C    T                      +    +E   L+I+G  P+    N +G
Sbjct: 62  SVCRACPRLVTWREEVAVAKRRAFADQPYWGRPVPGWGSERPWLLIVGLAPAAHGANRTG 121

Query: 126 KPFSG-KTGNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGNRNLSNIEM 171
           + F+G ++G+ L   L              +  +    I I        P     +  E 
Sbjct: 122 RMFTGDRSGDQLYAALHRAGLVSQPTSVDAADGLRAEPIRIVAPVRC-APPANAPTPAER 180

Query: 172 EICRPIIMRQIE--LISPKILLFIGNKTKNFFFNNDAQ-KTYQNLGKWSNLCTPHSIIPT 228
           + C P +  +        ++++ +G                 +       +    S +  
Sbjct: 181 KTCAPWLDAEWRLVSHDVRVIVALGGFAWKIALGLPGSLGAPRPRFGHGVVAELGSGVQL 240

Query: 229 LATVHPQ 235
           L   HP 
Sbjct: 241 LGCYHPS 247


>gi|296170162|ref|ZP_06851759.1| uracil-DNA glycosylase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295895188|gb|EFG74903.1| uracil-DNA glycosylase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 270

 Score = 79.0 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 66/238 (27%), Gaps = 37/238 (15%)

Query: 34  EATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLC 93
                                  +   +    Q  ++A+ A S+ EL +L+     C   
Sbjct: 6   RTGQPFDSPVVPGTGWPGDPATPQTPVAADAAQVAALARTATSIPELDALVSVCRACPRL 65

Query: 94  STSL------------------STICATQTEGQDLMIIGYTPSDSD-NISGKPFSG-KTG 133
                                   +    +E   L+I+G  P+    N +G+ F+G ++G
Sbjct: 66  VDWREDVAVLKRRAFADQPYWGRPVPGWGSERPRLLIVGLAPAAHGANRTGRMFTGDRSG 125

Query: 134 NMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180
           + L   L              +  +   Q+ I       PP     + +E + C P +  
Sbjct: 126 DQLYAALHRAGLVNQPTSVDAADGLRARQVRIVAPVRCAPP-ANAPTPLERDTCWPWLEA 184

Query: 181 QIE--LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS-IIPTLATVHPQ 235
           +        + ++ +G                +       +    +  +  L   HP 
Sbjct: 185 EWRLVSEHVRTIVALGGFAWQIALRLPGASVMRKPRFGHGVVAQFAPGVRLLGCYHPS 242


>gi|299140387|ref|ZP_07033547.1| Uracil-DNA glycosylase superfamily [Acidobacterium sp. MP5ACTX8]
 gi|298597637|gb|EFI53815.1| Uracil-DNA glycosylase superfamily [Acidobacterium sp. MP5ACTX8]
          Length = 279

 Score = 78.6 bits (192), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 66/210 (31%), Gaps = 44/210 (20%)

Query: 77  LHELKSLLRSFHDC-HLCSTSL-----------------STICATQTEGQDLMIIGYTPS 118
           L EL   + +   C  L                        +         + ++G  P 
Sbjct: 55  LQELHEAITTCERCTRLREYCRGIGETRRKAYRDEVYWARPVPGFGDPKARIHVMGLAPG 114

Query: 119 DSD-NISGKPFSGK-TGNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGN 163
               N +G+PF+G  +G+ +  +L                 +    + IS +    PPG+
Sbjct: 115 AHGANRTGRPFTGDGSGDFMYPVLHELGLATKPKAVAREDGLKLRNLWISSVVRCAPPGD 174

Query: 164 RNLSNIEMEICRPIIMRQIEL-ISPKILLFIGNKTKNFFF------NNDAQKTYQNLGKW 216
                 E+  C   +  +IE     ++++ +G    + +           +++    G  
Sbjct: 175 -KPKPEEIRNCSGHLTAEIEALPGVRVVVCLGKIAWDGYLAHLVASGVIERRSAYVFGHG 233

Query: 217 SNLCTPHSIIPTLATVHPQELIQYPLIKKN 246
           +    PH  +  L + HP   ++     + 
Sbjct: 234 AEYLLPH-GVTLLGSYHPS--LRNTNTGRL 260


>gi|161527874|ref|YP_001581700.1| uracil-DNA glycosylase superfamily protein [Nitrosopumilus
           maritimus SCM1]
 gi|160339175|gb|ABX12262.1| Uracil-DNA glycosylase superfamily [Nitrosopumilus maritimus SCM1]
          Length = 217

 Score = 78.6 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 71/222 (31%), Gaps = 46/222 (20%)

Query: 77  LHELKSLLRSFHDCHLCST-----SLSTI--C-----------ATQTEGQDLMIIGYTPS 118
           +  L   ++S   C   S      + + +                      L+I+G  P+
Sbjct: 3   IETLNKKIKSCQRCTRLSAYIRDVAKNKVRRFKDETYYGRPLSGFGDINAKLLIVGLAPA 62

Query: 119 DS-DNISGKPFSGK-TGNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGN 163
               N +G+ F+G  +G+ L K++                       +I+      PP N
Sbjct: 63  AHGGNRTGRMFTGDSSGDWLAKVMHKTGFANIPTSQTSDDGLTLNNAYITAAVRCAPPQN 122

Query: 164 RNLSNIEMEICRPIIMRQIEL-ISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSNL 219
              +  EM+ C   + +++++  +   +L +G    +      +    K         N 
Sbjct: 123 -KPTKEEMQNCFSFLEQELQILNNVTTILCLGKIAYDATCKLLDVKPGKFG------HNQ 175

Query: 220 CTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
              ++ +  + + HP    Q     +  W     + K  K L
Sbjct: 176 VFKYNEMQVITSYHPS--KQNTQTGRLLWKDWHAVFKRAKKL 215


>gi|111219605|ref|YP_710399.1| putative DNA polymerase-like protein [Frankia alni ACN14a]
 gi|111147137|emb|CAJ58784.1| Putative DNA polymerase related protein (partial) [Frankia alni
           ACN14a]
          Length = 171

 Score = 78.2 bits (191), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 56/136 (41%), Gaps = 10/136 (7%)

Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG--------N 163
           ++G  P D ++  G+PF G  G +LD+ L    + R +++ +                 +
Sbjct: 1   MVGEQPGDVEDRRGQPFVGPAGKLLDRALGEAGLDRAEVYATNAVKHFGYRTGNGPRRIH 60

Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH 223
           +      +  CRP +  ++ +I P +++ +G            +   +  G+      P 
Sbjct: 61  QTPQARHVTACRPWLAAELNVIRPSLVVVLGATAGASLLGPSFRV-TRMRGRLLPGP-PG 118

Query: 224 SIIPTLATVHPQELIQ 239
           S    LAT+HP  +++
Sbjct: 119 SNAQLLATLHPSAVLR 134


>gi|320106222|ref|YP_004181812.1| Uracil-DNA glycosylase superfamily [Terriglobus saanensis SP1PR4]
 gi|319924743|gb|ADV81818.1| Uracil-DNA glycosylase superfamily [Terriglobus saanensis SP1PR4]
          Length = 237

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 22/218 (10%), Positives = 55/218 (25%), Gaps = 40/218 (18%)

Query: 67  ADSIAQKACSLHELKSLLRSFHDCHL------------------CSTSLSTICATQTEGQ 108
              +AQ    L   +  + S   C                           +        
Sbjct: 3   PAPLAQAKSQLETARQNIVSCELCPRLRSYCIGIGETKRRAYLDWDYWARPVPGFGDPTA 62

Query: 109 DLMIIGYTPSDSD-NISGKPFSGK-TGNMLDKML-------------QSIEIMRTQIHIS 153
            ++I+G  P     N +G+PF+G   G  +  +L             +   +      I+
Sbjct: 63  RVLIVGLAPGAHGANRTGRPFTGDGAGYFMYPVLYNLGFATKPLATSRDDGLKLRGAWIA 122

Query: 154 MISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL 213
            +    PP ++ +                 L   ++++ +G    + +      +     
Sbjct: 123 SVVRCAPPADKPMPQEVRNCAVHFRAELAALRRLRVVVCLGKIAWDGYLAYLLGEGVIKR 182

Query: 214 GKWSNLCTPHS-----IIPTLATVHPQELIQYPLIKKN 246
                            +  + + HP   ++     + 
Sbjct: 183 RSAYTFTHGADYLMPNGLRLIGSYHPS--LRNTNTGRL 218


>gi|262195758|ref|YP_003266967.1| uracil-DNA glycosylase superfamily [Haliangium ochraceum DSM 14365]
 gi|262079105|gb|ACY15074.1| Uracil-DNA glycosylase superfamily [Haliangium ochraceum DSM 14365]
          Length = 213

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 69/182 (37%), Gaps = 13/182 (7%)

Query: 64  VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123
              A+  AQ+A +   L++ + +   C LC    +           LM++G  P   +  
Sbjct: 2   TPTANPPAQRA-TQRALRTHIDALRLCRLCPDMHAPPIPGPPVVSPLMLLGQAPGRHEGR 60

Query: 124 SGKPFSGKTGNMLDKMLQSIEIM----RTQIHISMISPWHP------PGNRNLSNIEMEI 173
            G+PF  K G  L      I +     R +++I+ +    P       G+R     E+E 
Sbjct: 61  VGRPFGWKAGKTLFTWFAGIGLPEEALRQRVYIAAVCRCFPGPHPSGGGDRVPKRAEIER 120

Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
           C   + R+IEL+ P++++ IG                + +G    +      +  +   H
Sbjct: 121 CHGWLAREIELLRPRLIIPIGKLAIAQLMPVRKL--SEVVGGCHRIAFAGHTLDAIPLPH 178

Query: 234 PQ 235
           P 
Sbjct: 179 PS 180


>gi|149194193|ref|ZP_01871291.1| Uracil-DNA glycosylase superfamily protein [Caminibacter
           mediatlanticus TB-2]
 gi|149136146|gb|EDM24624.1| Uracil-DNA glycosylase superfamily protein [Caminibacter
           mediatlanticus TB-2]
          Length = 208

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 61/166 (36%), Gaps = 8/166 (4%)

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH-ISMISPWH 159
                    +MIIG  P +++     PF GK G  L+ ++    + R +   I+   P+ 
Sbjct: 35  FLDNKTDNPIMIIGEAPGENEVKQKSPFVGKAGENLNYLISLSGLNRKKHFLITNAFPFR 94

Query: 160 PPGNRNLSN---IEMEICRPIIMRQIELISPKILLFIGNKTKNFF-FNNDAQKTYQNLGK 215
                        E++I   ++  +I ++ P ++L +GN +   F +     K  +  G 
Sbjct: 95  TINENKNRTPKISELKIASKLLEEEINIVKPSLILLLGNSSIKAFSYLVPEVKNLKKCGF 154

Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
           +         I      HP  L      +K    +L    K+L  L
Sbjct: 155 YDVDTEKFGKIKIGICYHPSPLAFN---RKEIRESLEKFFKSLYQL 197


>gi|240172643|ref|ZP_04751302.1| hypothetical protein MkanA1_25235 [Mycobacterium kansasii ATCC
           12478]
          Length = 268

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 62/230 (26%), Gaps = 37/230 (16%)

Query: 42  KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL---- 97
                          +   +    Q   +A  A S+ EL +L+     C           
Sbjct: 12  PVDPGTGWPGDPATPQTPVAADAAQVVQLAGAARSIRELDALVSVCRACPRLVGWREHVA 71

Query: 98  --------------STICATQTEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKMLQ 141
                           +    +E   L+I+G  P+    N +G+ F+G ++G+ L   L 
Sbjct: 72  AGKRRAFADQPYWGRPVPGWGSERPRLLIVGLAPAAHGANRTGRMFTGDRSGDQLYAALY 131

Query: 142 -------------SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE--LIS 186
                        +  +   QI I        P     +  E   C P +  +       
Sbjct: 132 RAGLVNQPTSVDSADGLRANQIRIVAPVRC-APPANAPTPAERLACSPWLDTEWRLVADD 190

Query: 187 PKILLFIGNKTKNFFFNNDAQ-KTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
            ++++ +G                 +       +    S +  L   HP 
Sbjct: 191 VRVIVALGGFAWQVALRMSGALAKPKPRFGHGVVAEVGSRLRLLGCYHPS 240


>gi|307595747|ref|YP_003902064.1| Uracil-DNA glycosylase superfamily [Vulcanisaeta distributa DSM
           14429]
 gi|307550948|gb|ADN51013.1| Uracil-DNA glycosylase superfamily [Vulcanisaeta distributa DSM
           14429]
          Length = 222

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/202 (12%), Positives = 57/202 (28%), Gaps = 38/202 (18%)

Query: 87  FHDCHLCST----------------SLSTICATQTEGQ-DLMIIGYTPSDSD-NISGKPF 128
              C    +                    +      G   +MI+G  P+    N +G+ F
Sbjct: 19  CRACPRLVSYRESVKPLPRFMNDDYWRRPVPPWGDLGNARIMIVGLAPAAHGGNRTGRMF 78

Query: 129 SGKTG-NMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSNIEMEIC 174
           +G +    L + L    +                  +I+ +    PP NR  +       
Sbjct: 79  TGDSSAQFLFRALYEAGLSSKPYSISRNDGVTIKCVYITSVVKCAPPNNRPNNEEIHTCV 138

Query: 175 RPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHP 234
                 ++E + P+ ++ +G+     F         +   K        + +    + HP
Sbjct: 139 SNWFRYELEHVRPRAIVALGHIA---FLGIKLALGIKAEFK-HGGYIDFNGVRIFMSYHP 194

Query: 235 QELIQYPLIKKNTWHALITLKK 256
               +     +     L+ + +
Sbjct: 195 SP--RNTNTGRLRIEDLVMILR 214


>gi|225872452|ref|YP_002753907.1| putative uracil-DNA glycosylase, family 4 [Acidobacterium
           capsulatum ATCC 51196]
 gi|225791513|gb|ACO31603.1| putative uracil-DNA glycosylase, family 4 [Acidobacterium
           capsulatum ATCC 51196]
          Length = 231

 Score = 77.9 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 65/220 (29%), Gaps = 42/220 (19%)

Query: 74  ACSLHELKSLLRSFHDCHL------------------CSTSLSTICATQTEGQDLMIIGY 115
             +L  L+  + S   C                           + +    G  L+++G 
Sbjct: 2   PLALAALEQRVVSCERCPRLREYCEEVARKRRRMWSEWDYWGKPVPSFGDPGARLLLVGL 61

Query: 116 TPSDSD-NISGKPFSGK-TGNMLDKMLQSIEI-------------MRTQIHISMISPWHP 160
            P     N +G+PF+G  +G+ L   L                        I+ +    P
Sbjct: 62  APGAHGSNRTGRPFTGDGSGDFLYPALYEAGFASQPKATHRGDGLRLLDAWITAVGRCAP 121

Query: 161 PGNRNLSNIEMEICRPIIMRQIEL-ISPKILLFIGNKTKNFFFNN-DAQKTYQNLGKWSN 218
           PGN      E+  C P +  ++      +++  +G    +    +          G    
Sbjct: 122 PGN-KPLPAELANCAPYLDEEVAALPRVRVIFALGKIAFDGIVGHLIRTGQIARRGPLQF 180

Query: 219 LCTPHSIIP----TLATVHPQELIQYPLIKKNTWHALITL 254
                  IP     +A+ HP   +Q     K T   ++ +
Sbjct: 181 GHGVCYAIPGGRFLMASYHPS--LQNTNTGKLTREMMLDV 218


>gi|299821653|ref|ZP_07053541.1| uracil-DNA glycosylase [Listeria grayi DSM 20601]
 gi|299817318|gb|EFI84554.1| uracil-DNA glycosylase [Listeria grayi DSM 20601]
          Length = 235

 Score = 77.9 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 30/178 (16%)

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG---- 162
              LM++G  P +++  +G PF+G+ G  L+KM+    + R +++I+      P      
Sbjct: 50  HPTLMLVGEAPGETEIHTGVPFTGRAGKELEKMMTRANVQRDEVYITSAVRSRPYKERQK 109

Query: 163 -------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209
                        NR  +  E+    P++  +IE  SP++++ +GN        +D    
Sbjct: 110 WDRKTERNEWKRYNRTPNKGEIIAHAPVLDYEIETSSPEVIVTLGNIGLKRLLGSDWSV- 168

Query: 210 YQNLGKWS------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
               G                          + T HP  +     +          + 
Sbjct: 169 SAAHGTVYQGPIQFWNQTKEQYDWTEKDYTVIPTFHPAAIFYNRKLLPLMEQDWDKIA 226


>gi|108800921|ref|YP_641118.1| uracil-DNA glycosylase superfamily protein [Mycobacterium sp. MCS]
 gi|119870061|ref|YP_940013.1| uracil-DNA glycosylase superfamily protein [Mycobacterium sp. KMS]
 gi|126436546|ref|YP_001072237.1| uracil-DNA glycosylase superfamily protein [Mycobacterium sp. JLS]
 gi|108771340|gb|ABG10062.1| Uracil-DNA glycosylase superfamily [Mycobacterium sp. MCS]
 gi|119696150|gb|ABL93223.1| Uracil-DNA glycosylase superfamily [Mycobacterium sp. KMS]
 gi|126236346|gb|ABN99746.1| Uracil-DNA glycosylase superfamily [Mycobacterium sp. JLS]
          Length = 273

 Score = 77.9 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/249 (11%), Positives = 61/249 (24%), Gaps = 44/249 (17%)

Query: 28  FDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSF 87
              P+                            +      +S+A    SL EL +L+   
Sbjct: 1   MQSPHPRTGVPFSSPVPPGTGWPGDPATPATAVAASAAAVESLAAAVGSLDELDALVSVC 60

Query: 88  HDCHLC---------STSLSTI---------CATQTEGQDLMIIGYTPSDSD-NISGKPF 128
             C                S +                  +M++G  P+    N +G+ F
Sbjct: 61  RACPRLVEWREEAATVKRKSFVDQPYWGRPAPGWGDTHPRIMVVGLAPAAHGANRTGRVF 120

Query: 129 SG-KTGNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC 174
           +G ++G+ L   L              +  +    + ++       P     +  E   C
Sbjct: 121 TGDRSGDFLFAALHRAGLANQSLCVDAADGLSLNDVRVAAAVRC-APPANAPTPAERATC 179

Query: 175 RPIIMRQIE--LISPKILLFIGNKTKNFFF------NNDAQKTYQNLGKWSNLCTPHSII 226
            P +  +        ++++ +G                         G  +        +
Sbjct: 180 APWLDAEWRLVSGDVRVVIALGGFAWKAALHMLRRGGASVPVPAPQFGHLAEAAI--DGV 237

Query: 227 PTLATVHPQ 235
             +   HP 
Sbjct: 238 TLMGCYHPS 246


>gi|237736711|ref|ZP_04567192.1| DNA polymerase [Fusobacterium mortiferum ATCC 9817]
 gi|229420573|gb|EEO35620.1| DNA polymerase [Fusobacterium mortiferum ATCC 9817]
          Length = 196

 Score = 77.9 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 61/174 (35%), Gaps = 12/174 (6%)

Query: 95  TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154
           +   T+  +     D++ IG  P    N   K     +G  L K+     I     +I+ 
Sbjct: 26  SERKTLIGSGNREADILFIGDDPDLYQNEDLKVAPSSSGEFLIKLCDIEGITPDDYYITT 85

Query: 155 ISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLG 214
           ++             E E  + ++  QI L+ PKI++ +G++      + D +   +  G
Sbjct: 86  LAK-KDCKFSEFMEEEREQLKELLNLQIALVKPKIIVVLGSEVAETLLDRDVKL-GEERG 143

Query: 215 KWSNLCTPHSIIPTLATVHPQELI--QYPLIKK-----NTWHALITLKKALKNL 261
                      I  L T     +   +    KK       W+ L  LK+ L  +
Sbjct: 144 NILEWI---GGIKLLITYDVNFVKKSRNEAGKKSRAALEFWNDLKILKQELNKI 194


>gi|169245921|gb|ACA50942.1| glycosylase [Mycobacterium marinum DL240490]
          Length = 209

 Score = 77.5 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 64/176 (36%), Gaps = 9/176 (5%)

Query: 79  ELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
            L + + +   C                +    + I+G +       S  PF+G +G  L
Sbjct: 13  ALAAQIVACERCEGLNIPGKTQAAPGYGSVRSPVAIVGQSLCRQCMKSQVPFTGGSGRFL 72

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           D       I + Q+ I+ +   HPP NR   + E+E C P + R++E++ P++++ +G  
Sbjct: 73  DAAFNLAGIAKKQVFITNVVHCHPPDNRPSHSHEIENCSPYLHRELEIVDPRLIIGLGRD 132

Query: 197 T------KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKN 246
                                  G  +   T   +       HP  +++ P   ++
Sbjct: 133 AKGTLRSAYPAAKELPWPFTGAPGSGTQRTTSADLDLLFP-PHPSWIMRQPRDSRD 187


>gi|32266428|ref|NP_860460.1| hypothetical protein HH0929 [Helicobacter hepaticus ATCC 51449]
 gi|32262478|gb|AAP77526.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
          Length = 209

 Score = 77.5 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 58/183 (31%), Gaps = 15/183 (8%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
           + L+S++++   C+                  L  I   P   +      F      ++ 
Sbjct: 40  NNLESIIKNCSLCNRIKHCKEPSFGILNPQSQLCFITEIPLVDE---KGVFIQNKSALMI 96

Query: 138 KMLQSIEIMRTQIHIS--MISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
           + +          HIS   +       N  L    +  C    + Q++ I+PK+ + +GN
Sbjct: 97  QNIIHNVFRLQMGHISLLSLVKC-DAHNPYLDKSNILSCMGFCLTQLQKITPKVCILLGN 155

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
           +               +   W N          L T    EL++ P +KK   +  +  K
Sbjct: 156 QVAEHILGQRL---EHSRILWHNNK------KFLITHSLNELVRNPSLKKEAHNDFLIAK 206

Query: 256 KAL 258
             L
Sbjct: 207 GQL 209


>gi|119873404|ref|YP_931411.1| uracil-DNA glycosylase superfamily protein [Pyrobaculum islandicum
           DSM 4184]
 gi|119674812|gb|ABL89068.1| Uracil-DNA glycosylase superfamily [Pyrobaculum islandicum DSM
           4184]
          Length = 210

 Score = 77.5 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 69/211 (32%), Gaps = 35/211 (16%)

Query: 76  SLHELKSLLRSFHDCH-LCSTSL--------STICATQTEGQDLMIIGYTPSDS-DNISG 125
              +    L +   C  L               +    +    +M++G  P+    N +G
Sbjct: 2   DFEDFLRKLTACRACPRLVEYRSSFPPGYWAKPVPPWGS--GPIMVVGLAPAAHGGNRTG 59

Query: 126 KPFSG-KTGNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLSNIEM 171
           + F+G ++   L K L             +   +    ++I+      PPGN   +  E+
Sbjct: 60  RMFTGDRSSQNLFKALYEAGLASRPYSISRDDGVELYGVYITSAVKCAPPGN-KPTAEEV 118

Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKW-SNLCTPHSIIPTLA 230
           + C   +  ++E++ P++++ +G             +     G++          +  + 
Sbjct: 119 KNCSRWLREEVEIVKPRVVVALGRVAWRAV-----SEILGVRGEFRHGAVVEKDGVYLVG 173

Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALKNL 261
             HP    +     +     L  + K  K L
Sbjct: 174 AYHPSP--RNINTGRIAVEELAEVFKLAKKL 202


>gi|183984152|ref|YP_001852443.1| hypothetical protein MMAR_4181 [Mycobacterium marinum M]
 gi|183177478|gb|ACC42588.1| conserved hypothetical protein [Mycobacterium marinum M]
          Length = 275

 Score = 77.5 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/247 (12%), Positives = 68/247 (27%), Gaps = 39/247 (15%)

Query: 25  YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLL 84
             V   P            +          + +   +    +   +A +A S+ EL + +
Sbjct: 4   DRVLTHP--RTGQPFGSPVRPGTGWPGDPASSQTPVAAEAARVAELAGRAGSIVELDAAI 61

Query: 85  RSFHDCHLCSTSL------------------STICATQTEGQDLMIIGYTPSDSD-NISG 125
                C    T                      +    +E   L+I+G  P+    N +G
Sbjct: 62  SVCRACPRLVTWREEVAVAKRRAFADQPYWGRPVPGWGSERPWLLIVGLAPAAHGANRTG 121

Query: 126 KPFSG-KTGNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGNRNLSNIEM 171
           + F+G ++G+ L   L              +  +   +I I        P     +  E 
Sbjct: 122 RMFTGDRSGDQLYAALHRAGLVSQPTSVDAADGLRAERIRIVAPVRC-APPANAPTPAER 180

Query: 172 EICRPIIMRQIE--LISPKILLFIGNKTKNFFFNNDAQ-KTYQNLGKWSNLCTPHSIIPT 228
           + C P +  +        ++++ +G                 +       +    S +  
Sbjct: 181 KTCAPWLDAEWRLVSHDVRVIVALGGFAWKVALGLPGSLGAPRPRFGHGVVAELGSGVQL 240

Query: 229 LATVHPQ 235
           L   HP 
Sbjct: 241 LGCYHPS 247


>gi|163791085|ref|ZP_02185505.1| DNA polymerase, bacteriophage-type [Carnobacterium sp. AT7]
 gi|159873641|gb|EDP67725.1| DNA polymerase, bacteriophage-type [Carnobacterium sp. AT7]
          Length = 216

 Score = 77.5 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 66/193 (34%), Gaps = 31/193 (16%)

Query: 99  TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158
            +          ++IG  P +++ ++G PFSG+ G  L +    +E+ R +++I+     
Sbjct: 25  FVYGQGPVNPKFLLIGEAPGETEALNGIPFSGRAGKELMRFFDLLEVDRKEVYITSAFRS 84

Query: 159 HPP-----------------GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
            P                   NR  +  E+    P++ +++E +    +L +GN      
Sbjct: 85  RPYRYKEKIDRKTKQVVLRKYNRPPTKQELIAHAPLLDQEVEKVQAPYILTMGNIGLQRL 144

Query: 202 FNNDAQKTYQNLGKWS-------------NLCTPHSIIPTLATVHPQELIQYPLIKKNTW 248
               A+ + Q  G+                           +T HP  +     + +   
Sbjct: 145 LGPKAKVSAQ-HGQLYKGPVLRLVSLKDNTYTWTEKDYAVFSTFHPAAIFYNRQLLETIH 203

Query: 249 HALITLKKALKNL 261
             L   KK +  +
Sbjct: 204 EDLAEFKKLIHKI 216


>gi|184200442|ref|YP_001854649.1| uracil-DNA glycosylase [Kocuria rhizophila DC2201]
 gi|183580672|dbj|BAG29143.1| uracil-DNA glycosylase [Kocuria rhizophila DC2201]
          Length = 282

 Score = 77.1 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/252 (11%), Positives = 57/252 (22%), Gaps = 44/252 (17%)

Query: 25  YWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLL 84
                 P+                  +         +        +A  A  + +L ++ 
Sbjct: 4   DAAHPLPHPLTGQPFPSPVPPGTGWPEDPAATDTPVAHDAAAVRDLAATAEDVDQLNAMA 63

Query: 85  RSFHDCHLCSTSL------------------STICATQTEGQDLMIIGYTPSDS-DNISG 125
                C                           + +       + +IG  P+ +  N +G
Sbjct: 64  SVCRACERLVQWREDVAETKRASFAGEPYWGRPVPSYGDPRARVAVIGLAPAANGGNRTG 123

Query: 126 KPFSGKT-GNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSNIEM 171
           + F+G   G+ +   L        +               +       PP     +  E 
Sbjct: 124 RMFTGDRAGDWIYAALHRAGFAEHETVSTAGDGQALHGVRMVAPVRCAPP-ANKPTPDEK 182

Query: 172 EICRPIIMRQIE-LISPKILLFIGNKTKNFFFNN--------DAQKTYQNLGKWSNLCTP 222
             C     R+I  L   + +L +G                     +     G    L TP
Sbjct: 183 AACGGWFDREIALLTELRGILALGGIAWQTVLAAAVRMGWEVPRPRPKFGHGVVVPLRTP 242

Query: 223 -HSIIPTLATVH 233
               +  +   H
Sbjct: 243 DGRDVRLVGCYH 254


>gi|146303503|ref|YP_001190819.1| uracil-DNA glycosylase superfamily protein [Metallosphaera sedula
           DSM 5348]
 gi|145701753|gb|ABP94895.1| Uracil-DNA glycosylase superfamily [Metallosphaera sedula DSM 5348]
          Length = 217

 Score = 77.1 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 63/214 (29%), Gaps = 37/214 (17%)

Query: 75  CSLHELKSLLRSFHDCHLCS--------TSL--------STICATQTEGQDLMIIGYTPS 118
             + EL   L + + C                         +         L+I+G  P+
Sbjct: 4   ADISELNRTLLACNLCPRLRAFAEDVALNRRRFNQEYWGKPVPGFGDPRAKLLIVGLAPA 63

Query: 119 DS-DNISGKPFSG-KTGNMLDKML-------------QSIEIMRTQIHISMISPWHPPGN 163
               N +G+PF+G +TG  +   L             +   ++   + ++      PP N
Sbjct: 64  AHGGNRTGRPFTGDETGKWVIGGLYELGLSNLREGVSRDDGLVLKGVFLTNAVSCAPPKN 123

Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH 223
              +   +     +      L   K++L +G+            K      K     T  
Sbjct: 124 MVRTQEIVNCSTHLKETVELLRELKVILALGSVAFRSVSLVLGVKENFAHLKV----TSK 179

Query: 224 SIIPTLATVHPQELIQYPLIKKNTWHALITLKKA 257
             I  + + HP  L       + TW   + + + 
Sbjct: 180 RGIYLVGSYHPSPL--NTRTGRLTWEEWLRVLRY 211


>gi|257467945|ref|ZP_05632041.1| DNA polymerase [Fusobacterium ulcerans ATCC 49185]
 gi|317062231|ref|ZP_07926716.1| DNA polymerase [Fusobacterium ulcerans ATCC 49185]
 gi|313687907|gb|EFS24742.1| DNA polymerase [Fusobacterium ulcerans ATCC 49185]
          Length = 202

 Score = 77.1 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 62/169 (36%), Gaps = 12/169 (7%)

Query: 97  LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156
              +  +  +   ++ IG  P    N   K  SG +G  L K+     I+  + +I+ ++
Sbjct: 30  RKLLIGSGNKDASVLFIGDDPDLYQNEDLKVASGSSGEFLIKLCDIEGILPDEYYITTLA 89

Query: 157 PWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKW 216
                  R+    +      ++  QI LI+P+I++ +G +        +  K  +  GK+
Sbjct: 90  K-KDCKFRDYMEDDQNELMEMLDMQIALINPEIVVALGPEAARALLKRE-VKIGEERGKF 147

Query: 217 SNLCTPHSIIPTLATVHPQELI--QYPLIKK-----NTWHALITLKKAL 258
                    I  L T     +   +    KK       W  L  LK+ +
Sbjct: 148 IQWT---GGIKLLLTYDVNFVKKSRNDSGKKSKVAIEFWADLKLLKEEM 193


>gi|224372334|ref|YP_002606706.1| DNA polymerase, bacteriophage-type [Nautilia profundicola AmH]
 gi|223589418|gb|ACM93154.1| DNA polymerase, bacteriophage-type [Nautilia profundicola AmH]
          Length = 195

 Score = 77.1 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 62/159 (38%), Gaps = 9/159 (5%)

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH-ISMISPWHPPGNRN 165
              +MIIG  P  ++    +PF GK G  L  ++++    R +   I+   P+       
Sbjct: 41  SNPIMIIGEAPGANEVRLKQPFVGKAGENLAYLIETSGFDRAKDFLITNAFPFRTFEGNK 100

Query: 166 ---LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP 222
                  E++    ++ R+IE++ P+++L +GN     F      K  +NL K       
Sbjct: 101 NRTPKAGELKTGAKLLEREIEIVKPRLILLLGNSAIKAFSYIPWAKDVKNLQKCGIYDIN 160

Query: 223 HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
                     HP  L      +K+   +L    K LK L
Sbjct: 161 --GYKVGLCFHPSPLAFN---RKDIRESLENFFKGLKTL 194


>gi|253583417|ref|ZP_04860615.1| DNA polymerase [Fusobacterium varium ATCC 27725]
 gi|251833989|gb|EES62552.1| DNA polymerase [Fusobacterium varium ATCC 27725]
          Length = 203

 Score = 76.7 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 64/171 (37%), Gaps = 12/171 (7%)

Query: 95  TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154
            +   +  +  +   ++ IG  P    N   K  SG +G  L K+     I+  + +I+ 
Sbjct: 29  AARKLLIGSGNKEASVLFIGDDPELYQNEDLKVASGSSGEFLIKLCDIEGILPDEYYITT 88

Query: 155 ISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLG 214
           ++       R+    +      ++  QI LI+P+I++ +G++        +  K  +  G
Sbjct: 89  LAK-KDCKFRDYMEDDQNELLEMLDMQIALINPEIVVALGSEAARALLKRE-VKIGEERG 146

Query: 215 KWSNLCTPHSIIPTLATVHPQELI--QYPLIKK-----NTWHALITLKKAL 258
           K+         I  L T     +   +    KK       W  L  LK+ +
Sbjct: 147 KFIQWV---GGIKLLLTYDVNFVKKSRNDSGKKSKVAIEFWSDLKLLKEEM 194


>gi|41408613|ref|NP_961449.1| hypothetical protein MAP2515c [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41396971|gb|AAS04832.1| hypothetical protein MAP_2515c [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 314

 Score = 76.7 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/245 (12%), Positives = 69/245 (28%), Gaps = 39/245 (15%)

Query: 27  VFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRS 86
           V + P             +           +   +    Q  ++A+ A ++ EL +L+  
Sbjct: 45  VLEHP--RTGQAFDSPVPAGSGWPGDPATPQTPVAADADQVIALARHAGAIPELDALVSV 102

Query: 87  FHDCHLCSTSL------------------STICATQTEGQDLMIIGYTPSDSD-NISGKP 127
              C                           + +  +    L+I+G  P+    N +G+ 
Sbjct: 103 CRACPRLVEWREEVAVVKRRAFADQPYWGRPVPSWGSARPRLLIVGLAPAAHGANRTGRM 162

Query: 128 FSG-KTGNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173
           F+G ++G+ L   L              +  +    I I       PP     + +E + 
Sbjct: 163 FTGDRSGDQLYAALYRAGLVNQPTSVDAADGLRTKHIRIVAPVHCAPP-ANVPTPVERDT 221

Query: 174 CRPIIMRQIE--LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP-HSIIPTLA 230
           C P +  +        ++++ +G                +       +       +  L 
Sbjct: 222 CWPWLQAEWRLISEHVRVVVALGGFGWQIALRLPGVPAARKPRFGHGVVAELAPGVRLLG 281

Query: 231 TVHPQ 235
             HP 
Sbjct: 282 CYHPS 286


>gi|253827782|ref|ZP_04870667.1| uracil-DNA glycosylase [Helicobacter canadensis MIT 98-5491]
 gi|313141999|ref|ZP_07804192.1| uracil-DNA glycosylase [Helicobacter canadensis MIT 98-5491]
 gi|253511188|gb|EES89847.1| uracil-DNA glycosylase [Helicobacter canadensis MIT 98-5491]
 gi|313131030|gb|EFR48647.1| uracil-DNA glycosylase [Helicobacter canadensis MIT 98-5491]
          Length = 216

 Score = 76.3 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 60/189 (31%), Gaps = 13/189 (6%)

Query: 73  KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
            + +   L   ++    C    +              L+ +  TP          F  K 
Sbjct: 37  PSQNQKNLNQAIKECQLCPQKLS--QPHIGLCNPHSKLLFLTITPLLDLQTR---FVSKG 91

Query: 133 GNMLDKMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191
             ML K++++   +   Q+ I  +     P   N      + C    ++Q+E    K ++
Sbjct: 92  ALMLKKIIENVFALPLQQVSILSLLKCEIPK--NTQEECTKNCMGYFLKQLEFSQSKTIV 149

Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
            +G +  N     D        GK          +    T    +L++ P +K       
Sbjct: 150 ILGEEVYNA-LTQDKTPYKNIQGKLFKWNH----LKLFPTFSLAQLLRQPELKIQAHKEF 204

Query: 252 ITLKKALKN 260
           +TLKK L  
Sbjct: 205 LTLKKDLYE 213


>gi|224418468|ref|ZP_03656474.1| uracil-DNA glycosylase [Helicobacter canadensis MIT 98-5491]
          Length = 250

 Score = 76.3 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 60/189 (31%), Gaps = 13/189 (6%)

Query: 73  KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
            + +   L   ++    C    +              L+ +  TP          F  K 
Sbjct: 71  PSQNQKNLNQAIKECQLCPQKLS--QPHIGLCNPHSKLLFLTITPLLDLQTR---FVSKG 125

Query: 133 GNMLDKMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191
             ML K++++   +   Q+ I  +     P   N      + C    ++Q+E    K ++
Sbjct: 126 ALMLKKIIENVFALPLQQVSILSLLKCEIPK--NTQEECTKNCMGYFLKQLEFSQSKTIV 183

Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
            +G +  N     D        GK          +    T    +L++ P +K       
Sbjct: 184 ILGEEVYNA-LTQDKTPYKNIQGKLFKWNH----LKLFPTFSLAQLLRQPELKIQAHKEF 238

Query: 252 ITLKKALKN 260
           +TLKK L  
Sbjct: 239 LTLKKDLYE 247


>gi|118464467|ref|YP_880649.1| uracil-DNA glycosylase [Mycobacterium avium 104]
 gi|118165754|gb|ABK66651.1| uracil-DNA glycosylase superfamily protein [Mycobacterium avium
           104]
          Length = 275

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/245 (12%), Positives = 69/245 (28%), Gaps = 39/245 (15%)

Query: 27  VFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRS 86
           V + P             +           +   +    Q  ++A+ A ++ EL +L+  
Sbjct: 6   VLEHP--RTGQAFDSPVPAGSGWPGDPATPQTPVAADADQVIALARHAGAIPELDALVSV 63

Query: 87  FHDCHLCSTSL------------------STICATQTEGQDLMIIGYTPSDSD-NISGKP 127
              C                           + +  +    L+I+G  P+    N +G+ 
Sbjct: 64  CRACPRLVEWREEVAVVKRRAFADQPYWGRPVPSWGSARPRLLIVGLAPAAHGANRTGRM 123

Query: 128 FSG-KTGNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173
           F+G ++G+ L   L              +  +    I I       PP     + +E + 
Sbjct: 124 FTGDRSGDQLYAALYRAGLVNQPTSVDAADGLRTKHIRIVAPVHCAPP-ANAPTPVERDT 182

Query: 174 CRPIIMRQIE--LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP-HSIIPTLA 230
           C P +  +        ++++ +G                +       +       +  L 
Sbjct: 183 CWPWLQAEWRLISEHVRVVVALGGFGWQIALRLPGVPAARKPRFGHGVVAELAPGVRLLG 242

Query: 231 TVHPQ 235
             HP 
Sbjct: 243 CYHPS 247


>gi|15827545|ref|NP_301808.1| hypothetical protein ML1105 [Mycobacterium leprae TN]
 gi|221230022|ref|YP_002503438.1| hypothetical protein MLBr_01105 [Mycobacterium leprae Br4923]
 gi|15214375|sp|Q9CC91|Y1105_MYCLE RecName: Full=Uncharacterized protein ML1105
 gi|13093095|emb|CAC31486.1| conserved hypothetical protein [Mycobacterium leprae]
 gi|219933129|emb|CAR71200.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
          Length = 229

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 62/202 (30%), Gaps = 37/202 (18%)

Query: 70  IAQKACSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLM 111
           ++  A S+ EL + +     C                           +    +E   L+
Sbjct: 2   LSGGAGSIPELNAQISVCRACPRLVDWREEVAVVKRRAFADQPYWGRPVPGWGSEQPRLL 61

Query: 112 IIGYTPSDSD-NISGKPFSG-KTGNMLDKMLQ-------------SIEIMRTQIHISMIS 156
           I+G  P+    N +G+ F+G ++G+ L   L              +  +   QI I+   
Sbjct: 62  IVGLAPAAHGANRTGRMFTGDRSGDQLYAALHRAGLVNLPISMDAADGLQANQIRITAPV 121

Query: 157 PWHPPGNRNLSNIEMEICRPIIMRQIE--LISPKILLFIGNKTKNFFFNNDA-QKTYQNL 213
              PPGN   +  E   C P +  +        + ++ +G                 +  
Sbjct: 122 RCAPPGN-APTQAEWVTCSPWLEAEWRLVSEYVRAIVALGGFAWQIVLRLPGVSAMRKPR 180

Query: 214 GKWSNLCTPHSIIPTLATVHPQ 235
                +   ++ +  L   HP 
Sbjct: 181 FSHGVVAQLYAGVRLLGCYHPS 202


>gi|322368684|ref|ZP_08043251.1| uracil-DNA glycosylase superfamily [Haladaptatus paucihalophilus
           DX253]
 gi|320551415|gb|EFW93062.1| uracil-DNA glycosylase superfamily [Haladaptatus paucihalophilus
           DX253]
          Length = 209

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 58/163 (35%), Gaps = 14/163 (8%)

Query: 85  RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK-TGNMLDKMLQSI 143
               +C LC+     +        D + +G  PS   + +G PF+G   G  L  +L  +
Sbjct: 16  EECTNCDLCNRRERVVHGYGDVDADFLFVGEMPSAGADETGVPFTGDAAGERLQGLLGRL 75

Query: 144 EIMRTQ----------IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
            +  +             ++ ++  H P     ++ E+  C P +  +I +I+P+IL+ +
Sbjct: 76  GMNESPADAEEPEIENAFLTYLTRCHHPER-PPNDGEIMTCEPYLNAEIRMINPEILVPV 134

Query: 194 GNKTKNFFFNNDAQKTYQNLGKW--SNLCTPHSIIPTLATVHP 234
           G             K   ++                 +  +HP
Sbjct: 135 GAGALAEIAAEYTTKPAADIDIVDDHATTIRGRGFELVPMIHP 177


>gi|182412764|ref|YP_001817830.1| uracil-DNA glycosylase superfamily protein [Opitutus terrae PB90-1]
 gi|177839978|gb|ACB74230.1| Uracil-DNA glycosylase superfamily [Opitutus terrae PB90-1]
          Length = 204

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 65/171 (38%), Gaps = 10/171 (5%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            ++  +   L +   C  C   L  +   +     ++++G  P D +   G+PF+   G 
Sbjct: 2   PNVAAIARHLTALSACRRCPAMLKPVVVGRPVPSRIILVGQAPGDKEPKLGRPFAWTAGK 61

Query: 135 MLDKML-QSIEI----MRTQIHISMISPWHP-----PGNRNLSNIEMEICRPIIMRQIEL 184
            L K   +++       R +I+ + +    P      G+R  +  E+  C   + R+ EL
Sbjct: 62  TLFKWFNEALGWTEDETRNRIYFAAVCRCFPGKRPEGGDRVPNPEEIANCASWLEREFEL 121

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
           + P ++L +G      F        +  +G+   +      +  +   HP 
Sbjct: 122 LQPALVLPVGKLAIGRFLPLPLAPLHDIIGRKFAIEFHGHRLDCIPLPHPS 172


>gi|18312559|ref|NP_559226.1| uracil-DNA glycosylase [Pyrobaculum aerophilum str. IM2]
 gi|18160026|gb|AAL63408.1| uracil-DNA glycosylase (Pa-UDGb) [Pyrobaculum aerophilum str. IM2]
          Length = 226

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 61/211 (28%), Gaps = 37/211 (17%)

Query: 78  HELKSLLRSFHDCHL----------------CSTSLSTICATQTEGQDLMIIGYTPSDS- 120
            +  + L +   C                   S     +         +M++G  P+   
Sbjct: 14  DDFVNRLVNCARCPRLVSYRSTVKPLRRYESWSYWGRPVPPWGDLNARVMVVGLAPAAHG 73

Query: 121 DNISGKPFSGKTG-NMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNL 166
            N +G+ F+G      L K L             +   +    ++I+      PP N   
Sbjct: 74  GNRTGRMFTGDASAQNLFKALFLLGLSNKPYSVSRDDGVEVRCVYITSAVKCAPPKN-RP 132

Query: 167 SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII 226
           +  E+  C   +  ++E + P+ ++ +G              T              + +
Sbjct: 133 TAEEVYNCSSWLREELEAVRPRAVVALGELAWRAVLKILGATTAAFK---HGEVVNAAGV 189

Query: 227 PTLATVHPQELIQYPLIKKNTWHALITLKKA 257
              A+ HP  L       + T   L  + + 
Sbjct: 190 RVYASYHPSPL--NVNTGRLTVETLAEVLRR 218


>gi|237752932|ref|ZP_04583412.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229375199|gb|EEO25290.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 224

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 70/201 (34%), Gaps = 13/201 (6%)

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120
            P          ++ +  +LK+++ S   C   S+  +       +   L+ +  +P   
Sbjct: 33  EPQFLAPTQQRFQSQNSRDLKTIVESCKLCAQKSSEPN--FGLCNKNSKLVFVTLSPLFD 90

Query: 121 DNISGKPFSGKTGNMLDKMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIM 179
             +    F  K   ML  +++   ++   ++ I  +     P     +++E   C    +
Sbjct: 91  GQMR---FGSKASIMLKNIIEGVFKLSLQEVSILSLLKCQIPKANEQASVE--SCMGYFL 145

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
           +Q+E  S K L+  G +    +   D +      GK               T     LI+
Sbjct: 146 KQLEFCSAKTLVIFGAEA-YSYLTKDNKSYESVQGKLLKWNHCA----VFPTFALSLLIR 200

Query: 240 YPLIKKNTWHALITLKKALKN 260
            P +K N     + LK+ +  
Sbjct: 201 QPELKINAHREFLELKRLMGE 221


>gi|227496427|ref|ZP_03926713.1| uracil-DNA glycosylase superfamily protein [Actinomyces
           urogenitalis DSM 15434]
 gi|226834046|gb|EEH66429.1| uracil-DNA glycosylase superfamily protein [Actinomyces
           urogenitalis DSM 15434]
          Length = 277

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 75/263 (28%), Gaps = 47/263 (17%)

Query: 42  KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL---- 97
                              +   +Q   +A +A +L EL + +     C           
Sbjct: 15  PVPPGTGWPGDPAQPTTAVAHDARQVRELALEA-TLAELDARVSVCRACPRLVAWREEVA 73

Query: 98  ---------------STICATQTEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKML 140
                            + +       + ++G  P+ +  N +G+ F+G ++G+ L   L
Sbjct: 74  TTGRRASFARQPYWGRPVASLGPADAPIYVVGLAPAANGANRTGRMFTGDRSGDWLWAAL 133

Query: 141 QSIEIMRTQI-------------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP 187
               +                   +       PP     +  E   C P I R+++L+ P
Sbjct: 134 YRAGLAMQPTSLHAGDGQGLRGVRMGAAVRCAPP-ANKPTTAEQAACLPWIARELDLVRP 192

Query: 188 KILLFIGNKTKNFFF------NNDAQKTYQNLGKWSNL---CTPHSIIPTLATVHPQELI 238
           ++LL +G                   +   + G  +           +  L + HP +  
Sbjct: 193 RVLLALGGIAWRTVLRLARDAGWQVPRPAPHFGHGAQALLTRLDGGQVTLLGSYHPSQ-- 250

Query: 239 QYPLIKKNTWHALITLKKALKNL 261
           Q     + T   L  +    K L
Sbjct: 251 QNTFTGRLTEEMLDQVLARAKAL 273


>gi|271969765|ref|YP_003343961.1| uracil-DNA glycosylase superfamily [Streptosporangium roseum DSM
           43021]
 gi|270512940|gb|ACZ91218.1| uracil-DNA glycosylase superfamily [Streptosporangium roseum DSM
           43021]
          Length = 266

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 31/236 (13%), Positives = 62/236 (26%), Gaps = 44/236 (18%)

Query: 43  EKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL----- 97
                             +    +   +A  + +L EL +       C            
Sbjct: 5   PPGSGCWPDDPARPDTPVAHDPAEVGELAGASRTLAELTARQSVCRACPRLVEWREEVAT 64

Query: 98  -------------STICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQS 142
                          I     E  +++I+G  P+    N +G+ F+G ++G+ L   L  
Sbjct: 65  VKRRAFAGETYWGRPIAGWGDERPEVLIVGLAPAAHGGNRTGRIFTGDRSGDWLFGSLHR 124

Query: 143 -------------IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS--P 187
                                 +       PP        E   C P + R++ L++   
Sbjct: 125 TGLAAQETSVRAGDGQRLIGARMVAAVRCAPP-ANKPEPSERAACFPWLSREVALVAGSV 183

Query: 188 KILLFIGNKTKNFF------FNNDAQKTYQNLGKWSNLCTPHSIIPT--LATVHPQ 235
           ++++ +G                D  +     G  + +       P   L   HP 
Sbjct: 184 RVVVALGGFAWQAVWPALKDAGYDLPRPRPPFGHGAEVEISRDGTPVRLLGCYHPS 239


>gi|254774286|ref|ZP_05215802.1| uracil-DNA glycosylase superfamily protein [Mycobacterium avium
           subsp. avium ATCC 25291]
          Length = 270

 Score = 75.9 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/245 (12%), Positives = 69/245 (28%), Gaps = 39/245 (15%)

Query: 27  VFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRS 86
           + + P             +           +   +    Q  ++A+ A ++ EL +L+  
Sbjct: 1   MLEHP--RTGQAFDSPVPAGSGWPGDPATPQTPVAADADQVIALARHAGAIPELDALVSV 58

Query: 87  FHDCHLCSTSL------------------STICATQTEGQDLMIIGYTPSDSD-NISGKP 127
              C                           + +  +    L+I+G  P+    N +G+ 
Sbjct: 59  CRACPRLVEWREEVAVVKRRAFADQPYWGRPVPSWGSARPRLLIVGLAPAAHGANRTGRM 118

Query: 128 FSG-KTGNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173
           F+G ++G+ L   L              +  +    I I       PP     + +E + 
Sbjct: 119 FTGDRSGDQLYAALYRAGLVNQPTSVDAADGLRTKHIRIVAPVHCAPP-ANAPTPVERDT 177

Query: 174 CRPIIMRQIE--LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP-HSIIPTLA 230
           C P +  +        ++++ +G                +       +       +  L 
Sbjct: 178 CWPWLQAEWRLISEHVRVVVALGGFGWQIALRLPGVPAARKPRFGHGVVAELAPGVRLLG 237

Query: 231 TVHPQ 235
             HP 
Sbjct: 238 CYHPS 242


>gi|319779221|ref|YP_004130134.1| hypothetical protein TEQUI_1067 [Taylorella equigenitalis MCE9]
 gi|317109245|gb|ADU91991.1| hypothetical protein TEQUI_1067 [Taylorella equigenitalis MCE9]
          Length = 296

 Score = 75.6 bits (184), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 46/225 (20%), Positives = 85/225 (37%), Gaps = 11/225 (4%)

Query: 41  RKEKSIDSAIQPITNIRHIHSPLVQQADSIA-QKACSLHELK-SLLRSFHDCHLCSTSL- 97
             ++S +   Q   +       +V   +  A     SL EL    ++++ D         
Sbjct: 75  APKESQNFNSQSFQDEVESVPEVVSSTEKHAIDSIKSLDELYFWYIKTYRDWGYAEDEHD 134

Query: 98  --STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMI 155
              T+         LM+   +PS  D +    F GK G +L  ML  + +   +I+ + +
Sbjct: 135 LIKTVPKD-LTNVKLMVFEESPSMEDILVSTQFVGKPGTLLKNMLSQLSLSLDEIYTTSV 193

Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK 215
                      S   + I      ++IEL+ P+++          F NN      Q    
Sbjct: 194 YKTDMTAPDEESRDLLVIEA--FKKEIELVDPQVIWCFDRSVLFKFLNNKKITIDQVR-- 249

Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
             NL   +   P + +++P+ LI  P+ KK+ W  L  + + L+N
Sbjct: 250 -FNLSLNNKYYPIICSLNPRILISNPVQKKDAWRGLNLIAQELQN 293


>gi|167948628|ref|ZP_02535702.1| uracil-DNA glycosylase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 205

 Score = 75.2 bits (183), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 64/157 (40%), Gaps = 11/157 (7%)

Query: 88  HDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM- 146
             C  C   +  +   Q     +M+IG  P D +  +G PF+   G  L K  Q I +  
Sbjct: 15  RACQRCPQMIGPVVTGQPALSAVMLIGQAPGDREGPAGHPFAWTAGKTLFKWFQQIGMDE 74

Query: 147 ---RTQIHISMISPWHP-----PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTK 198
              R+Q++++ +    P      G+R  +  E+  C   +  + EL+ P++L+ +G    
Sbjct: 75  AQFRSQVYMAAVCRCFPGKKPKGGDRVPNKQEITHCADWMRSEFELLQPRLLIPVGKLAI 134

Query: 199 NFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
             F      +  + +G+  ++    S    +   HP 
Sbjct: 135 EQF--CHFNRLTEVIGQCHSIDLNDSPADLIPLTHPS 169


>gi|283954522|ref|ZP_06372041.1| hypothetical protein C414_000230022 [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283793926|gb|EFC32676.1| hypothetical protein C414_000230022 [Campylobacter jejuni subsp.
           jejuni 414]
          Length = 206

 Score = 75.2 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 63/192 (32%), Gaps = 14/192 (7%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEG---QDLMIIGYTPSDSDNISGKPF 128
           ++  +  ELK L+ S   C    T      +          L+I+      S+N SG   
Sbjct: 24  EQTQNFEELKQLVSSCTLCQFSKTRK---FSLIEPKMKNAKLLILDVFGQRSENDSGILL 80

Query: 129 SGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188
           + K G  L   +  I  +R +                  +  ++ C P    +++LI P 
Sbjct: 81  NSKKGEKLKYYIHQILGLRDEDFYFSYLFKCFCNG-KFDDFSLQSCLPFFWNELKLIQPA 139

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW 248
            LL +G  T         Q  +   G+             + +     + + P  K+N  
Sbjct: 140 FLLCLGEYTFKSL---GFQDYHILKGEVFTY----KNFFIMPSYDLDFIEKNPSYKENFI 192

Query: 249 HALITLKKALKN 260
             L  LK  +K 
Sbjct: 193 QDLKKLKDFMKK 204


>gi|332795819|ref|YP_004457319.1| uracil-DNA glycosylase superfamily [Acidianus hospitalis W1]
 gi|332693554|gb|AEE93021.1| uracil-DNA glycosylase superfamily [Acidianus hospitalis W1]
          Length = 222

 Score = 75.2 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 69/214 (32%), Gaps = 41/214 (19%)

Query: 82  SLLRSFHDCHL------------------CSTSLSTICATQTEGQDLMIIGYTPSDS-DN 122
             + S + C                           +     E   L+I+G  P+    N
Sbjct: 12  DEIISCYRCPRLRQYSEMIAKIKVKRFRNWEYWGKPLPGYGDENASLLIVGLAPAAHGGN 71

Query: 123 ISGKPFSG-KTGNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSN 168
            +G+ F+G ++G  + K L  + +   +              +++      PP N     
Sbjct: 72  RTGRVFTGDESGKWVTKALYELGLSNLEFSLSREDNLILRGVYLTNAVKCAPPEN-KPLR 130

Query: 169 IEMEICRPIIMRQIEL-ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227
            E+  C   + ++I    + K++L +G    +       +K   + G   ++        
Sbjct: 131 EEILNCNYYLRKEITSLRNLKVILALGKIAFDSVCIAFNEKCKFSHGVVYDV----KGKK 186

Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
            + + HP    Q     + TW + + + +    L
Sbjct: 187 IVGSYHPSA--QNTKTGRLTWESFMQVVRKAYEL 218


>gi|145222824|ref|YP_001133502.1| uracil-DNA glycosylase superfamily protein [Mycobacterium gilvum
           PYR-GCK]
 gi|315443290|ref|YP_004076169.1| uracil-DNA glycosylase [Mycobacterium sp. Spyr1]
 gi|145215310|gb|ABP44714.1| Uracil-DNA glycosylase superfamily [Mycobacterium gilvum PYR-GCK]
 gi|315261593|gb|ADT98334.1| uracil-DNA glycosylase [Mycobacterium sp. Spyr1]
          Length = 282

 Score = 75.2 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 33/248 (13%), Positives = 68/248 (27%), Gaps = 44/248 (17%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P+       +   +            R   +    Q  ++A  A +L +L + +     C
Sbjct: 10  PHPRTGDLFETPVRPGRGWPGDPATSRTAVASNPAQVTALAAAAKNLRQLDAGVSVCRAC 69

Query: 91  HLCSTSL------------------STICATQTEGQDLMIIGYTPSDSD-NISGKPFSG- 130
                                           +    ++I+G  P+    N +G+ F+G 
Sbjct: 70  PRLVEWREEAASVKRKSYADQPYWGRPAPGFGSARPRILIVGLAPAAHGANRTGRVFTGD 129

Query: 131 KTGNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177
           ++G+ L   L              +  +    + ++      PP N   S  E   C P 
Sbjct: 130 RSGDFLFASLHRSGLANQSTCTDSADGLELNDVRVAAAVRCAPPDN-APSPAERTTCAPW 188

Query: 178 IMRQIE--LISPKILLFIGNKTKNFFF------NNDAQKTYQNLGK--WSNLCTPHSIIP 227
           +  +        ++++ +G                         G    + L TP   + 
Sbjct: 189 LDAEYRLTGTDVRVIVALGGFAWQVVLAMVRRTGGTVPVPAPKFGHAATAELATPRGAVT 248

Query: 228 TLATVHPQ 235
            L   HP 
Sbjct: 249 VLGCFHPS 256


>gi|156564027|ref|YP_001429769.1| uracil-DNA glycosylase [Bacillus phage 0305phi8-36]
 gi|154622724|gb|ABS83604.1| uracil-DNA glycosylase [Bacillus phage 0305phi8-36]
          Length = 205

 Score = 74.8 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 62/167 (37%), Gaps = 7/167 (4%)

Query: 96  SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMI 155
              T+ ++ T   ++MI+   P  S+ I G    G  G  L  +L  + I  + ++ + +
Sbjct: 43  RQGTVISSGTMTPEVMIVSDKPEQSEEIFGFSGFGMYGFYLMNLLDRVGIKISDVYWTQV 102

Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK 215
                     ++   ++     +  +I +  P +++ +G    +        K    +G+
Sbjct: 103 FK---EPVEAVNMSLIKDWYKYLHNEIVVTKPTVIIALGTTAISA-LAQQPIKIDTAIGE 158

Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLIKKNT---WHALITLKKALK 259
             +    +  IP +   HP+  +     K  T   W ++  +   L 
Sbjct: 159 EFDFDLGNKSIPVIPVYHPRNFLDTEEFKARTNDLWGSIKPIADMLA 205


>gi|253701154|ref|YP_003022343.1| phage SPO1 DNA polymerase-related protein [Geobacter sp. M21]
 gi|251776004|gb|ACT18585.1| phage SPO1 DNA polymerase-related protein [Geobacter sp. M21]
          Length = 212

 Score = 74.8 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/257 (11%), Positives = 82/257 (31%), Gaps = 52/257 (20%)

Query: 2   TSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHS 61
             +R +    +        +SGV  +          E   KEK+  +    +       +
Sbjct: 4   MDEREMVLGSLKGYLAELLESGVDELTFAQPAAGGREKGAKEKAPSTPAGAVPQAPTTPA 63

Query: 62  PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121
                A    + +  L                                L+ +        
Sbjct: 64  APEAAAVLAEEGSLRLE-------------------------GDPRARLLFV-------- 90

Query: 122 NISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ 181
            + G  F+G+ G +L+K++ ++   + ++ +                   E  R  +  +
Sbjct: 91  -MRGSGFAGEAGELLEKIVVAMGFGKGEVCLLSF-------------AAGEASRAAVAGR 136

Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241
           I  + P++++ +G +       ++     +  G++ +L      I  + T H + +++  
Sbjct: 137 IAALDPEVVVSMGEEAT-ALLLDNEAPLQRLRGRFHDLA----GIALMPTHHAEAMLENQ 191

Query: 242 LIKKNTWHALITLKKAL 258
            +K++ W+ +  +   L
Sbjct: 192 GLKRDAWNDMQQVMGRL 208


>gi|284033566|ref|YP_003383497.1| Uracil-DNA glycosylase superfamily [Kribbella flavida DSM 17836]
 gi|283812859|gb|ADB34698.1| Uracil-DNA glycosylase superfamily [Kribbella flavida DSM 17836]
          Length = 276

 Score = 74.8 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/236 (13%), Positives = 70/236 (29%), Gaps = 46/236 (19%)

Query: 45  SIDSAIQPITNIRHIHSPLVQQADSIAQKA--CSLHELKSLLRSFHDCHLCSTSL----- 97
            + +      +     +P+ + A  + + A    L EL + +     C            
Sbjct: 15  PVPAGTGWPEDPAGRRTPVARDAGEVLELAGTDDLAELTARVSVCRACPRLVGWREDVAV 74

Query: 98  -------------STICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQS 142
                          I         ++I+G  P+    N +G+ F+G ++G+ L   L  
Sbjct: 75  SKRKSFADQPYWGRPIAGWGAPDPRILIVGLAPAVHGGNRTGRVFTGDRSGDWLFASLHR 134

Query: 143 IEIMRTQI-------------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP-- 187
           + +                   +       PP     S  E + C P   R++EL+ P  
Sbjct: 135 LGLANQPTSVHAGDGLRLIGARMIAAVRCAPP-ANKPSPDERDTCNPWFRRELELVLPTT 193

Query: 188 KILLFIGNKTKNFFF------NNDAQKTYQNLGKWSNL--CTPHSIIPTLATVHPQ 235
           + ++ +G    +              +     G  +      P   +  + + HP 
Sbjct: 194 RAIVCLGKFGFDVLLNALQEIGGTLPRPRPKFGHAAEYVVPVPGGEVTVIGSFHPS 249


>gi|322435048|ref|YP_004217260.1| Uracil-DNA glycosylase superfamily [Acidobacterium sp. MP5ACTX9]
 gi|321162775|gb|ADW68480.1| Uracil-DNA glycosylase superfamily [Acidobacterium sp. MP5ACTX9]
          Length = 291

 Score = 74.8 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/258 (10%), Positives = 67/258 (25%), Gaps = 46/258 (17%)

Query: 32  NNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSL----HELKSLLRSF 87
            +   +            + P     H  +     ++ +A    SL      ++  +   
Sbjct: 19  PDFQMHPELTPADLSLEVVSPTERDSHSDTLFPVSSNPVASSPTSLPPVLQSIRRNIVEC 78

Query: 88  HDCHLCS------------------TSLSTICATQTEGQDLMIIGYTPSDSD-NISGKPF 128
             C                           +         ++I+G  P     N +G+PF
Sbjct: 79  TRCERLRLYGEAIGAARRRAYIDQVYWAKPVPGFGDPRARILILGLAPGAHGANRTGRPF 138

Query: 129 SGK-TGNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC 174
           +G  +G  +  +L                 +      I+ +    PPG++          
Sbjct: 139 TGDGSGFFMYPVLHSLGLASQPTALSADDGLKLRHAWIASVVRCAPPGDKPTPQEVRNCS 198

Query: 175 RPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL------GKWSNLCTPHSIIPT 228
             +      L   + ++ +G    + +  +               G  +    P+  +  
Sbjct: 199 SHLAAEIAALPRIRTVVCLGKIAWDGYLAHLVNTGILQRRSPYVFGHEAEYILPN-GLHL 257

Query: 229 LATVHPQELIQYPLIKKN 246
           L + HP   ++     + 
Sbjct: 258 LGSYHPS--LRNTNTGRL 273


>gi|282853806|ref|ZP_06263143.1| uracil-DNA glycosylase, family 4 [Propionibacterium acnes J139]
 gi|282583259|gb|EFB88639.1| uracil-DNA glycosylase, family 4 [Propionibacterium acnes J139]
          Length = 278

 Score = 74.8 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/273 (12%), Positives = 66/273 (24%), Gaps = 44/273 (16%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P+       +              +     +   + A  IA       +L + +     C
Sbjct: 5   PHPRIATLFESPVAPGSGWPGDPASPDTPVAKSAEDAARIAASCSEFEDLDAAISVCRAC 64

Query: 91  HLCSTSL------------------STICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131
                                      + +       ++IIG  P+    N +G+ F+G 
Sbjct: 65  PRLVKWREDIAVTKRAQWRDEPYWGRPVPSFGDPSARMVIIGLAPAAHGANRTGRMFTGD 124

Query: 132 -TGNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177
            +G+ L + L              +  +      I       PP N    + +       
Sbjct: 125 QSGDWLYRALYDADIASQAQSIDAADGLTLHDCRIIAPVHCAPPDNWPRPDEKRTCAIWF 184

Query: 178 IMRQIELISPKILLFIGNKTKNFFF--------NNDAQKTYQNLGKWSNLCTPHSIIPTL 229
                 L + + L+ +G                           G  + +  P   I  +
Sbjct: 185 DDELARLAALRALMCLGQIAWTSTLAAARRLGWQVPRPAPRFGHGTRTQVVRPDGSIIVV 244

Query: 230 -ATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
               H     Q     + T   L      L+NL
Sbjct: 245 LGCYHVS--RQNTNTGRLTRSMLDDAVNTLRNL 275


>gi|241759522|ref|ZP_04757625.1| putative DNA polymerase, bacteriophage-type [Neisseria flavescens
           SK114]
 gi|241320079|gb|EER56440.1| putative DNA polymerase, bacteriophage-type [Neisseria flavescens
           SK114]
          Length = 253

 Score = 74.4 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 85/274 (31%), Gaps = 37/274 (13%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRH-- 58
           M S R L   + L +   + +     +      +A   S R +  +    Q +  +    
Sbjct: 1   MLSSRYLHLHEALGLGPMWLNQNAKII--HAAPQAAAASVRPKTIVADTAQAVRTLSAGA 58

Query: 59  ------------IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTE 106
                          P V+  ++  +                +      ++         
Sbjct: 59  HQARTAAIATAQTAKPAVRVPEAAPKTIVETPAKTEKAAHSDNLPRLDVTIRP------- 111

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL 166
             ++M++   PS  D++ G  FSG  G +LD +L +I +   Q H +      P      
Sbjct: 112 -SEIMVVSICPSTEDSLHGTLFSGDVGTLLDNILAAIGLKPEQAHKTAWVKTAPVFTALP 170

Query: 167 SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII 226
               +      +  ++     + +LF+G              +   +G  + LC      
Sbjct: 171 DAEHIRSELAEMQNELTTSQARAVLFLGKI----------FDSPDMIGLMNELCAE---R 217

Query: 227 PTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
           P     HP  L+  P +K   W  L  LK+ L  
Sbjct: 218 PHFVIPHPARLLMQPQLKAQAWQILKPLKQLLAK 251


>gi|119715180|ref|YP_922145.1| uracil-DNA glycosylase superfamily protein [Nocardioides sp. JS614]
 gi|119535841|gb|ABL80458.1| Uracil-DNA glycosylase superfamily [Nocardioides sp. JS614]
          Length = 284

 Score = 74.4 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 77/253 (30%), Gaps = 45/253 (17%)

Query: 27  VFDEPNNEATYESQRKEKSI-DSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLR 85
           +   P     + S     +                +  V++   + +    L EL + + 
Sbjct: 4   LLPHPATRELFPSPVPPGTGWPGDPATERTPVATTAAQVRRLARVGEGVDELAELDARVS 63

Query: 86  SFHDCHLCSTSL------------------STICATQTEGQDLMIIGYTPSDSD-NISGK 126
               C                           +    T    ++I+G  P+ +  N +G+
Sbjct: 64  VCRACPRLVRWREDVARDKRASFATEPYWGRPVPGWGTTDPSVLIVGLAPAANGANRTGR 123

Query: 127 PFSG-KTGNMLDKMLQSIEIMRTQ-------------IHISMISPWHPPGNRNLSNIEME 172
            F+G ++G+ L   L  + + RT                +       PP N   + +E +
Sbjct: 124 IFTGDRSGDWLFAGLHRVGLARTATSTHADDGQELIGTRMIATVRCAPPQN-KPTVVERD 182

Query: 173 ICRPIIMRQIELISP--KILLFIGNKTKNFFF--------NNDAQKTYQNLGKWSNLCTP 222
            C P ++ ++ L+ P  ++++ +G    +                +     G  + L  P
Sbjct: 183 TCAPWLLAELGLVLPTVEVVVALGTFGWDATLRSFAGLGWQASRPRPRFGHGVETRLVGP 242

Query: 223 HSIIPTLATVHPQ 235
              +  L   HP 
Sbjct: 243 GREVTLLGCYHPS 255


>gi|84497941|ref|ZP_00996738.1| hypothetical protein JNB_17678 [Janibacter sp. HTCC2649]
 gi|84381441|gb|EAP97324.1| hypothetical protein JNB_17678 [Janibacter sp. HTCC2649]
          Length = 291

 Score = 74.4 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/281 (12%), Positives = 69/281 (24%), Gaps = 63/281 (22%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQR---KEKSIDSAIQPITNIR 57
           MT++R +S              G   V     +      +                    
Sbjct: 1   MTAERNIS--------------GTDGVTRVGPDRHPITGEPFLSPVPPGAGWPGDPATTD 46

Query: 58  HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI----------------- 100
              +  V    ++A  A +L E+ + +     C        T+                 
Sbjct: 47  TPVAHNVDDVHALAASALTLTEVDARVTVCRACPRLVDWRETVARHDRRASFADQPYWGR 106

Query: 101 --CATQTEGQDLMIIGYTPSDSD-NISGKPFSGK-TGNMLDKMLQSIEIMRTQI------ 150
              +        +I+G  P+ +  N +G+ F+G  +G+ L   L                
Sbjct: 107 PGPSFGDPDATALIVGLAPAANGTNRTGRMFTGDASGDFLYAALHRTGYANQPTSVGAGD 166

Query: 151 -------HISMISPWHPPGNRNLSNIEMEICRPIIMR--QIELISPKILLFIGNKTKNFF 201
                   I       PPGN   +  E   C   + R  ++     ++++ +G       
Sbjct: 167 GLELTGIRIVAAVRCAPPGN-VPTPTERATCATWLGRDLELLGDRLRVIMTLGEIGWKGV 225

Query: 202 ------FNNDAQKTYQNLGKWSNLCTP---HSIIPTLATVH 233
                             G  +           +  +   H
Sbjct: 226 LAATTTLGWTVPAPRPKFGHATEAILRTPSGHPVRLIGCYH 266


>gi|322369980|ref|ZP_08044542.1| uracil DNA glycosylase [Haladaptatus paucihalophilus DX253]
 gi|320550316|gb|EFW91968.1| uracil DNA glycosylase [Haladaptatus paucihalophilus DX253]
          Length = 202

 Score = 74.0 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/167 (13%), Positives = 52/167 (31%), Gaps = 19/167 (11%)

Query: 86  SFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSD----SDNISGKPFSGK------TGN 134
               C  L          T     D+M++G  P      ++   G  ++G       +G 
Sbjct: 12  DCSRCPELVECRNRISWGTGPRSADVMVVGEAPGAGAPDAEQWRGGNWTGMAYTTRHSGR 71

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPG----NRNLSNIEMEICRPIIMRQIELISPKIL 190
            +  +   +       + +      P G    NR     E++ C   +  ++  + P ++
Sbjct: 72  KIRSLFSDLGY---DAYFTNAVKCFPEGEDGSNREPRAEELDNCFDHLRTELATVDPTVV 128

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSN-LCTPHSIIPTLATVHPQE 236
           +  G        + ++      L +  + +      +  L  +HP  
Sbjct: 129 VSTGKHATKILLDFESIPMEGFLDRVLSPVECERLGVVLLPLLHPSY 175


>gi|86160389|ref|YP_467174.1| uracil-DNA glycosylase superfamily protein [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|85776900|gb|ABC83737.1| Uracil-DNA glycosylase superfamily [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 211

 Score = 74.0 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 56/150 (37%), Gaps = 17/150 (11%)

Query: 102 ATQTE------GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS-----IEIMRTQI 150
                         + +IG  P   +   G+PF+   G  L + L+       E++R ++
Sbjct: 25  GFGPPIHGPPVPSRIFLIGQAPGPHEARFGRPFAWTAGKTLFRWLERATGAGEELVRERV 84

Query: 151 HISMISPWHP-----PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
           +IS +    P      G+R  +  E  + R  + R++E++ P++++ +G         + 
Sbjct: 85  YISAVVRCFPGKAPGGGDRVPTPDECALWRGFVEREVEILRPRLVIPVGRLAIQEVLGHT 144

Query: 206 AQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
            +     +G+             +   HP 
Sbjct: 145 -EPIAAVVGRTLRAYFHGVKTDVIPLPHPS 173


>gi|220919197|ref|YP_002494501.1| uracil-DNA glycosylase superfamily [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219957051|gb|ACL67435.1| Uracil-DNA glycosylase superfamily [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 211

 Score = 74.0 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 65/177 (36%), Gaps = 15/177 (8%)

Query: 70  IAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTE-GQDLMIIGYTPSDSDNISGKPF 128
           + +   ++  L+++LR                         + +IG  P   +   G+PF
Sbjct: 1   MPRPPKTVTALEAVLRDVAAF---RPRGFGPPIHGPPVPSRIFLIGQAPGPHEARFGRPF 57

Query: 129 SGKTGNMLDKMLQS-----IEIMRTQIHISMISPWHP-----PGNRNLSNIEMEICRPII 178
           +   G  L + L+       +++R +++IS +    P      G+R  +  E  + R  +
Sbjct: 58  AWTAGKTLFRWLERATGAGEDLVRERVYISAVVRCFPGKAPGGGDRVPTPDECALWRGFV 117

Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
            R++E++ P++++ +G            +     +G+             +   HP 
Sbjct: 118 RREVEILRPRLVIPVGRLAIQEVLGRT-EPIAAVVGRTLRAYFHGVKTDVIPLPHPS 173


>gi|292656908|ref|YP_003536805.1| uracil DNA glycosylase [Haloferax volcanii DS2]
 gi|291370610|gb|ADE02837.1| uracil DNA glycosylase [Haloferax volcanii DS2]
          Length = 211

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 60/158 (37%), Gaps = 24/158 (15%)

Query: 86  SFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG-KTGNMLDKMLQSI 143
              +C  LC T    +      G + + +G  P+ +   +G PF+G + G  + ++L  +
Sbjct: 17  DCTNCSGLCETREQVVHGYGDVGAEFLFVGEAPTAAAERTGVPFTGDEAGRRVQRILGDL 76

Query: 144 EIMR----------TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
             +R            +  + ++    P     S+ E+  C P +  ++ +I+P I++ +
Sbjct: 77  GFVRSEPDADEPDVQNVFFTYLTRCRHPDRG-PSDDEVATCEPYLNAEVRMINPHIIVPV 135

Query: 194 GNKTKNFF-----------FNNDAQKTYQNLGKWSNLC 220
           G                  F+ DA+      G+   L 
Sbjct: 136 GQAALEALAFDYTTRAADSFDVDAEHATTIRGRGFELV 173


>gi|50842715|ref|YP_055942.1| uracil-DNA glycosylase [Propionibacterium acnes KPA171202]
 gi|50840317|gb|AAT82984.1| uracil-DNA glycosylase [Propionibacterium acnes KPA171202]
          Length = 278

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/273 (12%), Positives = 67/273 (24%), Gaps = 44/273 (16%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P+       +              +     +   + A  IA       +L + +     C
Sbjct: 5   PHPRIATLFESPVAPGSGWPGDPASPDTPVAKCAEDAARIAAHCSEFEDLDATISVCRAC 64

Query: 91  HLCSTSL------------------STICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131
                                      + +       ++IIG  P+    N +G+ F+G 
Sbjct: 65  PRLVKWREDIAVTKRAQWRDEPYWGRPVPSFGDPSARMVIIGLAPAAHGANRTGRMFTGD 124

Query: 132 -TGNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177
            +G+ L + L              +  +     HI       PP N    + +       
Sbjct: 125 QSGDWLYRALYDADIASQAQSIDAADGLTLHDCHIIAPVHCAPPDNWPRPDEKRTCAIWF 184

Query: 178 IMRQIELISPKILLFIGNKTKNFFF--------NNDAQKTYQNLGKWSNLCTPHSIIPTL 229
                 L + + ++ +G                           G  + L  P   I  +
Sbjct: 185 DDELARLTALRAVMCLGQIAWTSTLAAARRLGWQVPRPAPRFGHGTRTQLVRPDGSIIVV 244

Query: 230 -ATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
               H     Q     + T   L      L++L
Sbjct: 245 LGCYHVS--RQNTNTGRLTRSMLDDAVNTLRDL 275


>gi|197124467|ref|YP_002136418.1| uracil-DNA glycosylase superfamily protein [Anaeromyxobacter sp. K]
 gi|196174316|gb|ACG75289.1| Uracil-DNA glycosylase superfamily protein [Anaeromyxobacter sp. K]
          Length = 211

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 66/177 (37%), Gaps = 15/177 (8%)

Query: 70  IAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTE-GQDLMIIGYTPSDSDNISGKPF 128
           + +   ++  L+++LR                         + +IG  P   +   G+PF
Sbjct: 1   MPRPPKTVTALEAVLRDVAAF---RPRGFGPPIHGPPVASRIFLIGQAPGPHEARFGRPF 57

Query: 129 SGKTGNMLDKMLQS-----IEIMRTQIHISMISPWHP-----PGNRNLSNIEMEICRPII 178
           +   G  L + L+       E++R +++IS +    P      G+R  +  E  + R  +
Sbjct: 58  AWTAGKTLFRWLERATGAGEELVRERVYISAVVRCFPGKAPGGGDRVPTPDECALWRGFV 117

Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
            R++E++ P++++ +G         +  +     +G+             +   HP 
Sbjct: 118 RREVEILRPRLVIPVGRLAIQEVLGHT-EPIAAVVGRTLRAYFHGVKTDVIPLPHPS 173


>gi|153003318|ref|YP_001377643.1| uracil-DNA glycosylase superfamily protein [Anaeromyxobacter sp.
           Fw109-5]
 gi|152026891|gb|ABS24659.1| Uracil-DNA glycosylase superfamily [Anaeromyxobacter sp. Fw109-5]
          Length = 220

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 67/187 (35%), Gaps = 28/187 (14%)

Query: 65  QQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTE------GQDLMIIGYTPS 118
            +    +    +L  +   +++F                            ++++G  P 
Sbjct: 8   SRPRKASSVVAALEAVHRDIQAFR-----------PDGFGPPVHGPAVASRILLVGQAPG 56

Query: 119 DSDNISGKPFSGKTGNMLDKMLQ-----SIEIMRTQIHISMISPWHP-----PGNRNLSN 168
             +   G+PF+   G  L + L+       + +R +++I+ +    P      G+R  S 
Sbjct: 57  PHEARFGRPFAWTAGKTLFRWLERATGADEQTVRARVYIAAVVRCFPGKTTGGGDRVPSP 116

Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT 228
            E  + R  + R++E+++P++++ +G         +  +     +G+          +  
Sbjct: 117 EECALWRGFLAREVEILAPRLVIPVGRLAIQEVLGHT-EPIAAVVGRTLRTQFHGVNVDV 175

Query: 229 LATVHPQ 235
           L   HP 
Sbjct: 176 LPLPHPS 182


>gi|257075730|ref|ZP_05570091.1| uracil-DNA glycosylase [Ferroplasma acidarmanus fer1]
          Length = 220

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/221 (12%), Positives = 60/221 (27%), Gaps = 43/221 (19%)

Query: 76  SLHELKSLLRSFHDC-HLCSTS---------------LSTICATQTEGQDLMIIGYTPSD 119
           ++ +L   + S   C  L                      I    + G  ++I+G  P+ 
Sbjct: 2   NIEKLNREIVSCRKCTRLVEYRSSRSPRAGFAGETYWNKPITGYGSIGSRILIVGLAPAF 61

Query: 120 S-DNISGKPFSGKT-GNMLDKMLQSIEIMRTQ-------------IHISMISPWHPPGNR 164
              N +G+ F+G    + L   L +  +                  +I++     PP N+
Sbjct: 62  DGGNRTGRIFTGDKSSDFLISSLYAAGLANMPTSERKDDGLKYIDTYITLALKCAPPDNK 121

Query: 165 NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK--WSNLCTP 222
                             ++ + K +L +G    +              G          
Sbjct: 122 PEKEELNNCSGFFEKEIEQMENLKAILCLGKIAFDSTLKFFRAHQINTRGIKFIHGKYYN 181

Query: 223 HSIIPTLATVHPQE------LIQYPLIKKNTWHALITLKKA 257
              +    + HP        L++    K+     L  ++  
Sbjct: 182 IGGVRLYCSYHPSPRNVNTGLLR----KEEFISLLKKIRNF 218


>gi|291297008|ref|YP_003508406.1| Uracil-DNA glycosylase superfamily [Meiothermus ruber DSM 1279]
 gi|290471967|gb|ADD29386.1| Uracil-DNA glycosylase superfamily [Meiothermus ruber DSM 1279]
          Length = 221

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 61/220 (27%), Gaps = 38/220 (17%)

Query: 76  SLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLMIIGYTP 117
           SL  L + L +   C                           +         ++I G  P
Sbjct: 2   SLEALYAQLTACRACPRLVVWREQVGREKRAAFRHTPYWAKPVPGFGDPKARILIFGLAP 61

Query: 118 SDSD-NISGKPFSGK-TGNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPG 162
                N +G+PF+G  +G+ L   L                 +    ++I+      PP 
Sbjct: 62  GAHGSNRTGRPFTGDASGDFLYPALYQAGLANQPTSSHLDDGLALEGVYITAAVRCAPPK 121

Query: 163 NRNLSNIEMEICRPIIMRQIE-LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221
           N   + +E+  C     +++  L   ++ L +G                 +  +      
Sbjct: 122 N-KPTPLELRTCAGWTAQELALLPHLRVYLALGQIAHQALLAYHGLPRAHHPFR-HGGEY 179

Query: 222 PHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
                  L++ H     Q     K T      + +  K L
Sbjct: 180 RVGERVLLSSYHVS--RQNTQTGKLTRPMFEAILERAKAL 217


>gi|332672180|ref|YP_004455188.1| Uracil-DNA glycosylase superfamily [Cellulomonas fimi ATCC 484]
 gi|332341218|gb|AEE47801.1| Uracil-DNA glycosylase superfamily [Cellulomonas fimi ATCC 484]
          Length = 257

 Score = 73.2 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 54/174 (31%), Gaps = 34/174 (19%)

Query: 62  PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL------------------STICAT 103
                    A  A +L EL  L+     C                           +   
Sbjct: 13  DDATSNPMRAPSARTLAELDGLVVGCRACPRLVAWREHVAEVKRAAFRDETYWGRPVPGF 72

Query: 104 QTEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKMLQSIEI-------------MRT 148
                D++++G  P+    N +G+ F+G ++G+ L   +                     
Sbjct: 73  GDPRADVLVVGLAPAAHGANRTGRMFTGDRSGDFLFASMHRTGFASQALSVRADDGLTLD 132

Query: 149 QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202
            I ++      PP N   +  E   C P + R++ L+ P++++ +G        
Sbjct: 133 GIRVTAPVRCAPPEN-APTPQERRTCGPFLARELALVEPRVVVVLGGFGWQAVL 185


>gi|224438362|ref|ZP_03659289.1| hypothetical protein HcinC1_10256 [Helicobacter cinaedi CCUG 18818]
 gi|313144804|ref|ZP_07806997.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
 gi|313129835|gb|EFR47452.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
          Length = 208

 Score = 73.2 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 73/199 (36%), Gaps = 16/199 (8%)

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS 120
           +  +    S A     ++ L   +++   C+      +       +   +  I   P  S
Sbjct: 25  ANALFAPKSNAPIGQDINTL---IKNCSLCNRIKHCKTPNIGLINQNASVCFISEIPLVS 81

Query: 121 DNISGKPFSGKTGNMLDKMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIM 179
           ++ +      K+  ML  ++ +  ++  +Q+ I  +       N +    E+  C+P ++
Sbjct: 82  ESQAFV--QNKSAIMLQNIISNVFKLSLSQVSILSLIKC-DSLNPHFEKSELLSCKPYVL 138

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
            Q++ ++PK+ + +G+        +       +   W N          L T    EL++
Sbjct: 139 TQLQSLAPKLCVLLGDVVSEHILGSHL---EHSRILWHN------NRKFLVTYALNELVR 189

Query: 240 YPLIKKNTWHALITLKKAL 258
            P +K    +  +  K  L
Sbjct: 190 NPSLKAQAHNDFLIAKGQL 208


>gi|325969828|ref|YP_004246020.1| uracil-DNA glycosylase superfamily [Vulcanisaeta moutnovskia
           768-28]
 gi|323709031|gb|ADY02518.1| Uracil-DNA glycosylase superfamily [Vulcanisaeta moutnovskia
           768-28]
          Length = 220

 Score = 73.2 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 62/211 (29%), Gaps = 38/211 (18%)

Query: 78  HELKSLLRSFHDCHLCST----------------SLSTICATQTEGQ-DLMIIGYTPSDS 120
           ++  S L     C    +                 L  +          +MI+G  P+  
Sbjct: 5   NDFISKLIECRACPRLVSYRERVKPLPRFMNDRYWLRPVPPWGDLNNARIMIVGLAPAAH 64

Query: 121 -DNISGKPFSGKTG-NMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRN 165
             N +G+ F+G +    L + L    +                  +I+ +    PP NR 
Sbjct: 65  GGNRTGRMFTGDSSAQFLFRALYEAGLSNKPYSISRNDGVTLKCIYITSVVKCVPPNNRP 124

Query: 166 LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI 225
            +             ++E + P+ ++ +G+     F         +   + S      + 
Sbjct: 125 SNEELHTCIGNWFRYELEHVGPRAIIALGHIA---FLGIKLALGIRAEFRHSEY-IDFNG 180

Query: 226 IPTLATVHPQELIQYPLIKKNTWHALITLKK 256
           I    + HP    +     +     L+ + +
Sbjct: 181 IRIFMSYHPSP--RNTNTGRLRIRDLVNILR 209


>gi|289425152|ref|ZP_06426929.1| uracil-DNA glycosylase, family 4 [Propionibacterium acnes SK187]
 gi|289154130|gb|EFD02818.1| uracil-DNA glycosylase, family 4 [Propionibacterium acnes SK187]
          Length = 278

 Score = 72.9 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/273 (12%), Positives = 66/273 (24%), Gaps = 44/273 (16%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P+       +              +     +   + A  IA       +L + +     C
Sbjct: 5   PHPRIATLFESPVAPGSGWPGDPASPDTPVAKCAEDAARIAAHCSEFEDLDATISVCRAC 64

Query: 91  HLCSTSL------------------STICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131
                                      + +       ++IIG  P+    N +G+ F+G 
Sbjct: 65  PRLVKWREDIAVTKRAQWRDEPYWGRPVPSFGDPSARMVIIGLAPAAHGANRTGRMFTGD 124

Query: 132 -TGNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177
            +G+ L + L              +  +      I       PP N    + +       
Sbjct: 125 QSGDWLYRALYDADIASQAQSIDAADGLTLHDCRIIAPVHCAPPDNWPRPDEKRTCAIWF 184

Query: 178 IMRQIELISPKILLFIGNKTKNFFF--------NNDAQKTYQNLGKWSNLCTPHSIIPTL 229
                 L + + ++ +G                           G  + L  P   I  +
Sbjct: 185 DDELARLTALRAVMCLGQIAWTSTLAAARRLGWQVPRPAPRFGHGTRTQLVRPDGSIIVV 244

Query: 230 -ATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
               H     Q     + T   L      L++L
Sbjct: 245 LGCYHVS--RQNTNTGRLTRSMLDDAVNTLRDL 275


>gi|118577083|ref|YP_876826.1| uracil-DNA glycosylase [Cenarchaeum symbiosum A]
 gi|118195604|gb|ABK78522.1| uracil-DNA glycosylase [Cenarchaeum symbiosum A]
          Length = 227

 Score = 72.9 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/224 (12%), Positives = 63/224 (28%), Gaps = 46/224 (20%)

Query: 74  ACSLHELKSLLRSFHDCHL----------CSTSLS--------TICATQTEGQDLMIIGY 115
           A  L  L   +     C                           +         ++++G 
Sbjct: 2   ASGLEALNRRIVRCKKCPRLSAYIRDVAEKKVRRHAGEKYWGRPLSGFGDPHARILVVGL 61

Query: 116 TPSDS-DNISGKPFSGK-TGNMLDKMLQ-------------SIEIMRTQIHISMISPWHP 160
            P+    N +G+ F+G  +G+ + + L                 ++    +I+      P
Sbjct: 62  APAAHGGNRTGRMFTGDSSGDWVARALHENGLANKPTSTTIDDGLVLYDTYITAAVRCAP 121

Query: 161 PGNRNLSNIEMEICRPIIMRQIE-LISPKILLFIGNKT---KNFFFNNDAQKTYQNLGKW 216
           P N      E E C   I  + + L   ++++ +G               ++        
Sbjct: 122 PQN-KPLKEEFENCFGYIEEEFKLLTDVRVVVCLGRIAFSCCCRLLGIRGEQFAHGR--- 177

Query: 217 SNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
                 H  +  + + HP    Q     + TW     + +  +N
Sbjct: 178 ---VFAHGNLSIVCSYHPS--RQNTQTGRLTWPQWKRIFRLARN 216


>gi|254820131|ref|ZP_05225132.1| uracil-DNA glycosylase superfamily protein [Mycobacterium
           intracellulare ATCC 13950]
          Length = 278

 Score = 72.9 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/248 (12%), Positives = 69/248 (27%), Gaps = 42/248 (16%)

Query: 27  VFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRS 86
           V D P             +           +   +    +  ++A++A S+ EL +L+  
Sbjct: 6   VLDHP--RTGQPFDSPVGAGTGWPGDPATPQTPVAADAARVVALAEQATSIPELDALVSV 63

Query: 87  FHDCHLCSTSL------------------STICATQTEGQDLMIIGYTPSDSD-NISGKP 127
              C                           + +       L+I+G  P+    N +G+ 
Sbjct: 64  CRACPRLVDWREEVARVKRRAFADQPYWGRPVPSWGAARPRLLIVGLAPAAHGANRTGRM 123

Query: 128 FSG-KTGNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173
           F+G ++G+ L   L              +  +   QI I        P     +  E + 
Sbjct: 124 FTGDRSGDQLYAALYRAGLVNQPTSVDAADGLRTNQIRIVAPVRC-APPANAPTPAERDT 182

Query: 174 CRPIIMRQIE--LISPKILLFIGNKTKNFFFNNDAQK----TYQNLGKWSNLCTPHSIIP 227
           C P +  + +      ++++ +G                    +       +      + 
Sbjct: 183 CWPWLQAEWQLVADHVRVVVALGGFGWQIALRLPGTSGRAAGPKPRFGHGAVADLAPGVR 242

Query: 228 TLATVHPQ 235
            L   HP 
Sbjct: 243 LLGCYHPS 250


>gi|116623923|ref|YP_826079.1| uracil-DNA glycosylase superfamily protein [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116227085|gb|ABJ85794.1| Uracil-DNA glycosylase superfamily [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 233

 Score = 72.9 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 75/221 (33%), Gaps = 43/221 (19%)

Query: 77  LHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLMIIGYTPS 118
           L  L+  +     C                           + +       ++I+G  P 
Sbjct: 2   LELLQQEIIHCCRCPRLCAHTAEIAELKRRAYRDQTYWGRPVPSFGDPNARVLILGLAPG 61

Query: 119 DSD-NISGKPFSG-KTGNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGN 163
               N +G+ F+G ++G++L ++L                      ++I+  +   PPGN
Sbjct: 62  AHGSNRTGRMFTGDRSGDILYRVLHHTGFASQPVAVSREDGLQLHDLYITAAAHCAPPGN 121

Query: 164 RNLSNIEMEICRPIIMRQIE-LISPKILLFIGNKTKNFFF------NNDAQKTYQNLGKW 216
              +  E+  CRP + R++E L + K+++ +G    + +          + +     G  
Sbjct: 122 -KPTPQELRNCRPYLERELELLTNLKVVVALGKIAFDVYLDVLKSQGVISSRAPFLFGHD 180

Query: 217 SNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKA 257
               T       +A+ HP +  Q     K T   L  + + 
Sbjct: 181 LQYRTAPGHPILIASYHPSQ--QNTSTGKLTEKMLTDVFRR 219


>gi|167044093|gb|ABZ08777.1| putative Uracil DNA glycosylase superfamily protein [uncultured
           marine crenarchaeote HF4000_APKG5B22]
          Length = 226

 Score = 72.9 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 65/218 (29%), Gaps = 40/218 (18%)

Query: 77  LHELKSLLRSFHDCHLC------------------STSLSTICATQTEGQDLMIIGYTPS 118
           L +L   +     C                           +         L+IIG  P+
Sbjct: 8   LEQLNKKIIKCRKCPRLSEYIRMVAKEKVSRFRHEKYWGRPLPGFGDVSAQLLIIGLAPA 67

Query: 119 DS-DNISGKPFSGK-TGNMLDKMLQSI-------------EIMRTQIHISMISPWHPPGN 163
               N +G+ F+G  +G+ L K L                       +++      PP N
Sbjct: 68  AHGGNRTGRMFTGDSSGDWLAKALYENKFATKDTSNRLGDGFELKNSYVTAAIRCAPPKN 127

Query: 164 RNLSNIEMEICRPIIMRQIEL-ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP 222
              + +E+E C P +  ++++  + ++++ +G      F         +  G   +    
Sbjct: 128 -KPARMEIENCMPYLSEELKILKNIRVIICLGRIAFETFCKL-FSIKNKEFGHGRSFSFS 185

Query: 223 HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
              I  + + HP    Q     +  W     + +    
Sbjct: 186 GKTI--ICSYHPS--RQNTQTGRLGWDEWTDIFQKANQ 219


>gi|315928325|gb|EFV07640.1| DNA polymerase, bacteriophage-type [Campylobacter jejuni subsp.
           jejuni DFVF1099]
          Length = 597

 Score = 72.9 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 70/191 (36%), Gaps = 10/191 (5%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
           ++  +  ELK L+ S   C    T   ++   + +   L+I+      S+N SG   + K
Sbjct: 24  EQVQNFQELKQLVSSCTLCQFSKTRKFSLMEPKIKNAKLLILDVFGQKSENESGILLNSK 83

Query: 132 TGNMLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
            G  L   + Q + +     + S +      G  +  +  ++ C P    +++LI P  L
Sbjct: 84  KGEKLKHYIYQILGLCDEDFYFSYLFKCFCNGKFDDFS--LQSCLPFFWNELKLIQPAFL 141

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
           L +G  T         +  +   G+             + +     + + P  +KN    
Sbjct: 142 LCLGEYTFKSL---GFKDYHILKGEVFAY----KNFFIMPSYDLDFIEKNPSYEKNFIQD 194

Query: 251 LITLKKALKNL 261
           L  LK   + +
Sbjct: 195 LKKLKDFYEKI 205


>gi|153877406|ref|ZP_02004223.1| conserved hypothetical protein [Beggiatoa sp. PS]
 gi|152066130|gb|EDN65777.1| conserved hypothetical protein [Beggiatoa sp. PS]
          Length = 91

 Score = 72.9 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/78 (38%), Positives = 45/78 (57%)

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170
           M+IG  P   ++  G+PF G  G +L+ ML++I+  R +++I+ +    PPGNRN    E
Sbjct: 1   MLIGEAPGADEDAVGEPFVGPAGQLLNAMLRAIDFKREEVYIANMVKCRPPGNRNPKLEE 60

Query: 171 MEICRPIIMRQIELISPK 188
           M  C   +  QI LI PK
Sbjct: 61  MVCCHGFLQHQISLIKPK 78


>gi|225077456|ref|ZP_03720655.1| hypothetical protein NEIFLAOT_02518 [Neisseria flavescens
           NRL30031/H210]
 gi|224951205|gb|EEG32414.1| hypothetical protein NEIFLAOT_02518 [Neisseria flavescens
           NRL30031/H210]
          Length = 253

 Score = 72.5 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 43/272 (15%), Positives = 81/272 (29%), Gaps = 33/272 (12%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAI---------- 50
           M S R L   + L +   + +     +   P   A     +   +  +            
Sbjct: 1   MLSSRYLHLHEALGLGPMWLNQNAKIIHAAPQAAAAPVCPKTIAADTAQAVRTLSAGVHQ 60

Query: 51  --QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQ 108
                        P V+  ++  +                +      ++           
Sbjct: 61  ARTAAIAAAQTAKPAVRVPEAAPKAIAETPAKTEKAAHSDNLPRLDVTIRP--------S 112

Query: 109 DLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSN 168
           ++M++   PS  D++ G  FSG  G +LD +L SI +   Q H +      P        
Sbjct: 113 EIMVVSICPSTEDSLHGTLFSGDVGTLLDNILASIGLKPEQAHKTAWVKTAPVFTALPDA 172

Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT 228
             +      +  ++     + +LF+G              +   +G  + LC      P 
Sbjct: 173 EHIRSELAEMQNELTASQARAVLFLGKI----------FDSPDMIGLMNELCAE---RPH 219

Query: 229 LATVHPQELIQYPLIKKNTWHALITLKKALKN 260
               HP  L+  P +K   W  L  LK+ L  
Sbjct: 220 FVIPHPARLLMQPQLKAQAWQILKPLKQLLAK 251


>gi|153951968|ref|YP_001397945.1| hypothetical protein JJD26997_0818 [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|152939414|gb|ABS44155.1| conserved hypothetical protein [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 192

 Score = 72.5 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 69/188 (36%), Gaps = 10/188 (5%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
           ++  +  ELK L+ S   C    T   ++   + +   L+I+      S+N SG   + K
Sbjct: 14  EQTQNFQELKQLVSSCTLCQFSKTRKFSLMEPKIKNVKLLILDVFGQKSENESGILLNSK 73

Query: 132 TGNMLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
            G  L   + Q + +     + S +      G  +  +  ++ C P    +++LI P  L
Sbjct: 74  KGEKLKHYIYQILGLCDEDFYFSYLFKCFCNGKFDDFS--LQSCLPFFWNELKLIQPAFL 131

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
           L +G  T         +  +   G+             + +     + + P  +KN    
Sbjct: 132 LCLGEYTFKSL---GFKDYHILKGEVFAY----KNFFIMPSYDLDFIEKNPSYEKNFIQD 184

Query: 251 LITLKKAL 258
           L  +K  L
Sbjct: 185 LKKIKGFL 192


>gi|24216582|ref|NP_714063.1| uracil-DNA glycosylase [Leptospira interrogans serovar Lai str.
           56601]
 gi|24197905|gb|AAN51081.1| uracil-DNA glycosylase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 205

 Score = 72.5 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 62/164 (37%), Gaps = 11/164 (6%)

Query: 82  SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
             L S   C   +   + +         ++ +G  P   +   G+PF+   G  L    +
Sbjct: 13  ERLLSCRKCP--NMQGNPVHGC-VPVSKIISLGQAPGIHEERFGRPFAYTAGKTLFGWFK 69

Query: 142 SIEIM----RTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
            I I     R+++++S +    P     G+R   +IE++ C   +  ++    P++L+ I
Sbjct: 70  KIGIEEENFRSKVNMSAVCRCFPGKAKSGDRKPDSIEVKNCSQFLEFEVRFHKPELLIPI 129

Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237
           G    +  F     K    +G+  +       +  +   HP  L
Sbjct: 130 GKLAIDQVFELGKYKLEDVIGRSFSREFYGVQLDWIPLPHPSGL 173


>gi|45658925|ref|YP_003011.1| uracil DNA glycosylase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|45602170|gb|AAS71648.1| uracil DNA glycosylase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 205

 Score = 72.1 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 62/164 (37%), Gaps = 11/164 (6%)

Query: 82  SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
             L S   C   +   + +         ++ +G  P   +   G+PF+   G  L    +
Sbjct: 13  ERLLSCRKCP--NMQGNPVHGC-VPVSKIISLGQAPGIHEERFGRPFAYTAGKTLFGWFK 69

Query: 142 SIEIM----RTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
            I I     R+++++S +    P     G+R   +IE++ C   +  ++    P++L+ I
Sbjct: 70  KIGIEEENFRSKVNMSAVCRCFPGKAKSGDRKPDSIEVKNCSQFLEFEVRFHKPELLIPI 129

Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237
           G    +  F     K    +G+  +       +  +   HP  L
Sbjct: 130 GKLAIDQVFELGKYKLEDVIGRSFSRKFYGVQLDWIPLPHPSGL 173


>gi|257388679|ref|YP_003178452.1| uracil-DNA glycosylase superfamily [Halomicrobium mukohataei DSM
           12286]
 gi|257170986|gb|ACV48745.1| Uracil-DNA glycosylase superfamily [Halomicrobium mukohataei DSM
           12286]
          Length = 208

 Score = 72.1 bits (175), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 65/162 (40%), Gaps = 13/162 (8%)

Query: 85  RSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143
            +  +C  LC T  + +      G +L+++G +PS++ +  G PF G+    L  +L+ +
Sbjct: 16  ETCQNCPELCETRQNVVHGYGDVGAELLVLGESPSETADAVGLPFVGERERELLDILERV 75

Query: 144 EI---------MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
            +             ++++ +S  H P      + E+  C P +  ++ +I+P++LL +G
Sbjct: 76  GLVDDPDADRPQFDNVYLTYVSRCHHPERGAT-DEEVRNCEPYLNSEVRMINPELLLPVG 134

Query: 195 NKTKNFFFNNDAQKTYQNLG--KWSNLCTPHSIIPTLATVHP 234
               +         +   L   +             L  + P
Sbjct: 135 QAALDALAFEYTTLSEDELAVEERHATTIRGRGFELLPMIEP 176


>gi|167725307|ref|ZP_02408543.1| putative DNA glycosylase [Burkholderia pseudomallei DM98]
          Length = 152

 Score = 72.1 bits (175), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 55/132 (41%), Gaps = 13/132 (9%)

Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPWH-------PPGNRNLSNIEMEICRPIIM 179
           PF G  G +L++ L +  + R  ++++                ++  +  E++ CR  + 
Sbjct: 3   PFVGPAGRVLERALAAAGLDRASVYVTNAVKHFKWAPRGKRRMHKTPAQQEIDACRYWLE 62

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
           R+++ + P++++ +G        ++   +    +G    +         +AT HP  +++
Sbjct: 63  RELDALGPRVVVALGAIALKAVLDDRHARLQPAMG----VVQSAGGRYVIATYHPSFVLR 118

Query: 240 --YPLIKKNTWH 249
              P  +K  + 
Sbjct: 119 VPDPDARKRAYA 130


>gi|116329070|ref|YP_798790.1| Uracil-DNA glycosylase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116330320|ref|YP_800038.1| Uracil-DNA glycosylase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116121814|gb|ABJ79857.1| Uracil-DNA glycosylase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116124009|gb|ABJ75280.1| Uracil-DNA glycosylase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 205

 Score = 72.1 bits (175), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 59/162 (36%), Gaps = 11/162 (6%)

Query: 84  LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143
           L S   C       + I         ++ +G  P   +   GKPF+   G  L    + I
Sbjct: 15  LLSCRKCP--KMQGNPIHGC-IPSSRIISLGQAPGIHEERFGKPFAYTAGKTLFGWFKKI 71

Query: 144 EIM----RTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
            I     R+++++S +    P     G+R     E++ C   +  ++    P++L+ IG 
Sbjct: 72  GIEEETFRSKVNMSAVCRCFPGKAKSGDRKPDLEEVKNCSEFLEFEVRFHKPELLIPIGK 131

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237
              +  F     K    +GK  +       +  +   HP  L
Sbjct: 132 LAIDQLFEFGKYKLEDVIGKTFSREFYGVRLDWIPLPHPSGL 173


>gi|205356685|ref|ZP_03223446.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|205345423|gb|EDZ32065.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
           CG8421]
          Length = 597

 Score = 72.1 bits (175), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 70/191 (36%), Gaps = 10/191 (5%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
           ++  +  ELK L+ S   C    T   ++   + +   L+I+      S+N SG   + K
Sbjct: 24  EQVQNFQELKQLVSSCTLCQFSKTRKFSLMEPKIKNAKLLILDVFGQKSENESGILLNSK 83

Query: 132 TGNMLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
            G  L   + Q + +     + S +      G  +  +  ++ C P    +++LI P  L
Sbjct: 84  KGEKLKHYIYQILGLCDEDFYFSYLFKCFCNGKFDDFS--LQSCLPFFWNELKLIQPAFL 141

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
           L +G  T         +  +   G+             + +     + + P  +KN    
Sbjct: 142 LCLGEYTFKSL---GFKDYHILKGEVFAY----KNFFIMPSYDLDFIEKNPSYEKNFIQD 194

Query: 251 LITLKKALKNL 261
           L  +K   + +
Sbjct: 195 LKKIKGFYEKI 205


>gi|86150656|ref|ZP_01068877.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88596675|ref|ZP_01099912.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|218562582|ref|YP_002344361.1| hypothetical protein Cj0963 [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|85838837|gb|EAQ56105.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88191516|gb|EAQ95488.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|112360288|emb|CAL35083.1| hypothetical protein Cj0963 [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|284926196|gb|ADC28548.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           IA3902]
          Length = 202

 Score = 72.1 bits (175), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 69/188 (36%), Gaps = 10/188 (5%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
           ++  +  ELK L+ S   C    T   ++   + +   L+I+      S+N SG   + K
Sbjct: 24  EQVQNFQELKQLVSSCTLCQFSKTRKFSLMEPKIKNAKLLILDVFGQKSENESGILLNSK 83

Query: 132 TGNMLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
            G  L   + Q + +     + S +      G  +  +  ++ C P    +++LI P  L
Sbjct: 84  KGEKLKHYIYQILGLCDEDFYFSYLFKCFCNGKFDDFS--LQSCLPFFWNELKLIQPAFL 141

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
           L +G  T         +  +   G+             + +     + + P  +KN    
Sbjct: 142 LCLGEYTFKSL---GFKDYHILKGEVFAY----KNFFIMPSYDLDFIEKNPSYEKNFIQD 194

Query: 251 LITLKKAL 258
           L  +K  L
Sbjct: 195 LKKIKGFL 202


>gi|157415225|ref|YP_001482481.1| hypothetical protein C8J_0905 [Campylobacter jejuni subsp. jejuni
           81116]
 gi|157386189|gb|ABV52504.1| DNA polymerase, bacteriophage-type [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|307747867|gb|ADN91137.1| phage SPO1 DNA polymerase-related protein [Campylobacter jejuni
           subsp. jejuni M1]
 gi|315932550|gb|EFV11483.1| DNA polymerase, bacteriophage-type [Campylobacter jejuni subsp.
           jejuni 327]
          Length = 202

 Score = 72.1 bits (175), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 69/188 (36%), Gaps = 10/188 (5%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
           ++  +  ELK L+ S   C    T   ++   + +   L+I+      S+N SG   + K
Sbjct: 24  EQVQNFQELKQLVSSCTLCQFSKTRKFSLMEPKIKNVKLLILDVFGQKSENESGILLNSK 83

Query: 132 TGNMLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
            G  L   + Q + +     + S +      G  +  +  ++ C P    +++LI P  L
Sbjct: 84  KGEKLKHYIYQILGLCDEDFYFSYLFKCFCNGKFDDFS--LQSCLPFFWNELKLIQPAFL 141

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
           L +G  T         +  +   G+             + +     + + P  +KN    
Sbjct: 142 LCLGEYTFKSL---GFKDYHILKGEIFAY----KNFFIMPSYDLDFIEKNPSYEKNFIQD 194

Query: 251 LITLKKAL 258
           L  +K  L
Sbjct: 195 LKKIKGFL 202


>gi|57237791|ref|YP_179039.1| hypothetical protein CJE1043 [Campylobacter jejuni RM1221]
 gi|57166595|gb|AAW35374.1| conserved hypothetical protein [Campylobacter jejuni RM1221]
 gi|315058404|gb|ADT72733.1| DNA polymerase, bacteriophage-type [Campylobacter jejuni subsp.
           jejuni S3]
          Length = 202

 Score = 72.1 bits (175), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 69/188 (36%), Gaps = 10/188 (5%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
           ++  +  ELK L+ S   C    T   ++   + +   L+I+      S+N SG   + K
Sbjct: 24  EQVQNFQELKQLVSSCTLCQFSKTRKFSLMEPKIKNVKLLILDVFGQKSENESGILLNSK 83

Query: 132 TGNMLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
            G  L   + Q + +     + S +      G  +  +  ++ C P    +++LI P  L
Sbjct: 84  KGEKLKHYIYQILGLCDEDFYFSYLFKCFCNGKFDDFS--LQSCLPFFWNELKLIQPAFL 141

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
           L +G  T         +  +   G+             + +     + + P  +KN    
Sbjct: 142 LCLGEYTFKSL---GFKDYHILKGEVFAY----KNFFIMPSYDLDFIEKNPSYEKNFIQD 194

Query: 251 LITLKKAL 258
           L  +K  L
Sbjct: 195 LKKIKGFL 202


>gi|51893117|ref|YP_075808.1| uracil-DNA glycosylase [Symbiobacterium thermophilum IAM 14863]
 gi|51856806|dbj|BAD40964.1| uracil-DNA glycosylase [Symbiobacterium thermophilum IAM 14863]
          Length = 253

 Score = 71.7 bits (174), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 66/226 (29%), Gaps = 43/226 (19%)

Query: 48  SAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCST------------ 95
           SA  P                 + ++   L  L   +     C    T            
Sbjct: 4   SAPHPGPAAPGCADHPPHL---VPERTRCLEGLHRDIIECDRCPRLRTYCAEVGQTRVRR 60

Query: 96  ------SLSTICATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKML------- 140
                     +         L I+G  P     N +G+ F+G   G  L   L       
Sbjct: 61  YRDQEYWARPVPGFGDPEARLFILGLAPGAHGANRTGRMFTGDDSGRWLYGALYEFGFAD 120

Query: 141 ------QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIEL-ISPKILLFI 193
                 +   +  T  +IS +    PPGN   S  E+  CRP +  ++ +    +++L +
Sbjct: 121 RPESVSRDDGLTLTDAYISNVVRCAPPGN-KPSPGEIAACRPFLEAELAMLTRVRVVLAL 179

Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA----TVHPQ 235
           G    + +      + +   G+          IP L     + HP 
Sbjct: 180 GRIAFDTYVRLRRAQGFDP-GRIDFRHGAEYRIPGLPVLLSSYHPS 224


>gi|315928507|gb|EFV07811.1| DNA polymerase, bacteriophage-type [Campylobacter jejuni subsp.
           jejuni 305]
          Length = 216

 Score = 71.7 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 69/190 (36%), Gaps = 10/190 (5%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
           ++  +  ELK L+ S   C    T   ++   + +   L+I+      S+N SG   + K
Sbjct: 24  EQVQNFQELKQLVSSCTLCQFSKTRKFSLMEPKIKNAKLLILDVFGQKSENESGILLNSK 83

Query: 132 TGNMLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
            G  L   + Q + +     + S +      G  +  +  ++ C P    +++LI P  L
Sbjct: 84  KGEKLKHYIYQILGLCDEDFYFSYLFKCFCNGKFDDFS--LQSCLPFFWNELKLIQPAFL 141

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
           L +G  T         +  +   G+             + +     + + P  +KN    
Sbjct: 142 LCLGEYTFKSL---GFKDYHILKGEVFAY----KNFFIMPSYDLDFIEKNPSYEKNFIQD 194

Query: 251 LITLKKALKN 260
           L  LK   + 
Sbjct: 195 LKKLKDFYEK 204


>gi|292654411|ref|YP_003534308.1| uracil DNA glycosylase [Haloferax volcanii DS2]
 gi|291371708|gb|ADE03935.1| uracil DNA glycosylase [Haloferax volcanii DS2]
          Length = 211

 Score = 71.7 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 63/194 (32%), Gaps = 27/194 (13%)

Query: 86  SFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSD----SDNISGKPFSGK------TGN 134
               C  L             +   +M++G  P      ++   G  ++G       +G 
Sbjct: 20  DCARCPALVDCRNRISWGVGPDDATVMVVGEAPGAGNPDAERWRGGNWTGMSYTARHSGR 79

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPG----NRNLSNIEMEICRPIIMRQIELISPKIL 190
            + + + ++    + +  +      P      NR  +  E   CR  ++ ++E + P ++
Sbjct: 80  RIRETMAAVGY-ESGVFYTNAVKCFPSDGEGSNRAPTAAEKANCRDHLVSELEAVDPDVV 138

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSN-LCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249
           +  G          D       L    + + +       +  +HP          ++ W 
Sbjct: 139 VPTGRHATESVLALDDASLDGFLDTVLDPVESERFGYTVVPLLHPSY--------RDVWL 190

Query: 250 ALI--TLKKALKNL 261
           + +   L++ L +L
Sbjct: 191 SRLGYELEEYLADL 204


>gi|148926116|ref|ZP_01809802.1| hypothetical protein Cj8486_1120c [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|145845595|gb|EDK22687.1| hypothetical protein Cj8486_1120c [Campylobacter jejuni subsp.
           jejuni CG8486]
          Length = 202

 Score = 71.3 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 69/188 (36%), Gaps = 10/188 (5%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
           ++  +  ELK L+ S   C    T   ++   + +   L+I+      S+N SG   + K
Sbjct: 24  EQVQNFQELKQLVSSCTLCQFSKTRKFSLMEPKIKNVKLLILDVFGQKSENESGILLNSK 83

Query: 132 TGNMLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
            G  L   + Q + +     + S +      G  +  +  ++ C P    +++LI P  L
Sbjct: 84  KGEKLKHYIYQILGLCDEDFYFSYLFKCFCNGKFDDFS--LQSCLPFFWNELKLIQPAFL 141

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
           L +G  T         +  +   G+             + +     + + P  +KN    
Sbjct: 142 LCLGEYTFKNL---GFKDYHILKGEVFAY----KNFFIMPSYDLDFIEKNPSYEKNFIQD 194

Query: 251 LITLKKAL 258
           L  +K  L
Sbjct: 195 LKKIKGFL 202


>gi|121612802|ref|YP_001000645.1| hypothetical protein CJJ81176_0986 [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|121504202|gb|EAQ71865.2| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 192

 Score = 71.3 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 70/188 (37%), Gaps = 10/188 (5%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
           ++  +  ELK L+ S   C    T   ++   + +   L+I+      S+N SG   + K
Sbjct: 14  EQVQNFQELKQLVSSCTLCQFSKTRKFSLMEPKIKNAKLLILDVFGQKSENESGILLNSK 73

Query: 132 TGNMLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
            G  L + + Q + +     + S +      G  +  +  ++ C P    +++LI P  L
Sbjct: 74  KGEKLKRYIYQILGLCDEDFYFSYLFKCFCNGKFDDFS--LQSCLPFFWNELKLIQPAFL 131

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
           L +G  T         +  +   G+             + +     + + P  +KN    
Sbjct: 132 LCLGEYTFKSL---GFKDYHILKGEVFAY----KNFFIMPSYDLDFIEKNPSYEKNFIQD 184

Query: 251 LITLKKAL 258
           L  +K  L
Sbjct: 185 LKKIKGFL 192


>gi|86150841|ref|ZP_01069057.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|86152879|ref|ZP_01071084.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85842011|gb|EAQ59257.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|85843764|gb|EAQ60974.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 202

 Score = 71.3 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 70/188 (37%), Gaps = 10/188 (5%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
           ++  +  ELK L+ S   C    T   ++   + +   L+I+      S+N SG   + K
Sbjct: 24  EQVQNFQELKQLVSSCTLCQFSKTRKFSLMEPKIKNAKLLILDVFGQKSENESGILLNSK 83

Query: 132 TGNMLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
            G  L + + Q + +     + S +      G  +  +  ++ C P    +++LI P  L
Sbjct: 84  KGEKLKRYIYQILGLCDEDFYFSYLFKCFCNGKFDDFS--LQSCLPFFWNELKLIQPAFL 141

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
           L +G  T         +  +   G+             + +     + + P  +KN    
Sbjct: 142 LCLGEYTFKSL---GFKDYHILKGEVFAY----KNFFIMPSYDLDFIEKNPSYEKNFIQD 194

Query: 251 LITLKKAL 258
           L  +K  L
Sbjct: 195 LKKIKGFL 202


>gi|197124079|ref|YP_002136030.1| uracil-DNA glycosylase superfamily protein [Anaeromyxobacter sp. K]
 gi|196173928|gb|ACG74901.1| Uracil-DNA glycosylase superfamily protein [Anaeromyxobacter sp. K]
          Length = 226

 Score = 71.3 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 61/200 (30%), Gaps = 39/200 (19%)

Query: 74  ACSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLMIIGY 115
           A +L  + + +     C                           I         + ++G 
Sbjct: 2   ADTLSAVAAEVVRCRACPRLVAWREQVARAKRRAYRDEVYWGRPIPGFGDARARIALVGL 61

Query: 116 TPSDSD-NISGKPFSG-KTGNMLDKMLQ-------------SIEIMRTQIHISMISPWHP 160
            P     N +G+ F+G ++G+ L   L                 +      I+      P
Sbjct: 62  APGAHGSNRTGRMFTGDRSGDFLYAALHRAGLASQPTSRARDDGLALDGAWITSACRCAP 121

Query: 161 PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK---TKNFFFNNDAQKTYQNLGKW- 216
           P N   S  E+  C P + R++ L+ P++L+ +G+              ++  +   ++ 
Sbjct: 122 PDN-RPSPDELARCAPFLDRELALLRPRVLVALGSVGWDAILAALRRAGREVPRPRPRFG 180

Query: 217 SNLCTPHSIIP-TLATVHPQ 235
                    +P  L   HP 
Sbjct: 181 HGAELRLPGLPAVLGCYHPS 200


>gi|309780720|ref|ZP_07675461.1| uracil DNA glycosylase superfamily protein [Ralstonia sp.
           5_7_47FAA]
 gi|308920402|gb|EFP66058.1| uracil DNA glycosylase superfamily protein [Ralstonia sp.
           5_7_47FAA]
          Length = 373

 Score = 71.3 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 60/170 (35%), Gaps = 9/170 (5%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTI-CATQTEGQDLMIIGYTPSD-SDNISGKPFS 129
            K     +L   + +   C   + S   +          LM +G  P     + S  PF 
Sbjct: 5   DKEAKFLDLVHRVTACQKCPRMAGSARVLGPGCGPLDAPLMFVGEAPGRLGADGSHLPFH 64

Query: 130 GKT-GNMLDKMLQSIEIMRTQIHISMISPWHPP----GNRNLSNIEMEICRPIIMRQIEL 184
           G   G+  +K+++ + I R ++ ++     +P      N   ++ E+  C P +   +E+
Sbjct: 65  GDKSGHNFEKLIEQVGISRYEVFVTNAVLCNPKDERGNNATPTSTEIANCAPFLRETVEI 124

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHP 234
           + P I++ +G              ++    +      P      +   HP
Sbjct: 125 LDPSIVVTLGAVALKA-CGELEAHSFSLRDQVRT-NNPWMHRSLIPVYHP 172


>gi|220918858|ref|YP_002494162.1| uracil-DNA glycosylase superfamily [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219956712|gb|ACL67096.1| Uracil-DNA glycosylase superfamily [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 226

 Score = 71.3 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 62/200 (31%), Gaps = 39/200 (19%)

Query: 74  ACSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLMIIGY 115
           A +L  + + +     C                           I         + ++G 
Sbjct: 2   ADTLSAVAAEVVRCRACPRLVAWREQVAREKRRAYRDEVYWGRPIPGFGDARARIALVGL 61

Query: 116 TPSDSD-NISGKPFSG-KTGNMLDKMLQ-------------SIEIMRTQIHISMISPWHP 160
            P     N +G+ F+G ++G+ L   L                 +      I+      P
Sbjct: 62  APGAHGSNRTGRMFTGDRSGDFLYAALHRAGLATQPTSRARDDGLALDGAWITSACRCAP 121

Query: 161 PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK---TKNFFFNNDAQKTYQNLGKW- 216
           P N   +  E+  C P + R++ L+ P++L+ +G+              ++  +   ++ 
Sbjct: 122 PDN-RPTPDELARCAPFLDRELALLRPRVLVALGSVGWDAILAALRRAGREVPRPRPRFG 180

Query: 217 SNLCTPHSIIP-TLATVHPQ 235
                  + +P  L   HP 
Sbjct: 181 HGAELRLAGLPAVLGCYHPS 200


>gi|218461579|ref|ZP_03501670.1| probable DNA-directed DNA polymerase protein [Rhizobium etli Kim 5]
          Length = 143

 Score = 71.3 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 48/120 (40%), Gaps = 11/120 (9%)

Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIM 179
           PF G  G++LD+ L+   + R + +++                +   +  E+  C   + 
Sbjct: 1   PFVGPAGHLLDRCLEEAGLNRERCYVTNAVKHFKFTPRGKRRLHAKPNAGEIRRCAWWLG 60

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
            ++ ++ PK+++ +G           A+      G       P +  P L T+HP  L++
Sbjct: 61  AELNILQPKLVVALGASALYALLGPKAKL-TPERGHILQ---PRNHPPVLVTIHPSFLLR 116


>gi|150396807|ref|YP_001327274.1| uracil-DNA glycosylase superfamily protein [Sinorhizobium medicae
           WSM419]
 gi|150028322|gb|ABR60439.1| Uracil-DNA glycosylase superfamily [Sinorhizobium medicae WSM419]
          Length = 217

 Score = 71.3 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 68/213 (31%), Gaps = 21/213 (9%)

Query: 68  DSIAQKACSLHELKSLLRSFHDCHLCSTS--LSTICATQTE------GQDLMIIGYTPSD 119
              A     L  L+  +     C           +               ++I G  P  
Sbjct: 5   RGSAVTEEHLQALREAISLCRRCRDDPARGMDHRLPHEPRPVAVLSSSARILIAGQAPGL 64

Query: 120 SDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHP--PGNRNLSNIEMEIC 174
             + SG PF+  +G+ L + L   ++         I  +    P   G+ +      E  
Sbjct: 65  RVHESGLPFNDASGDRLRQWLSVDRTAFYDPGNFAIVPMGFCFPGYDGHGSDLPPRSECA 124

Query: 175 RPIIMRQIE-LISPKILLFIGNKTKNFFFNN-DAQKTYQNLGKWSNLCTPHSIIPTLATV 232
                R I+ +   +++L +G+  + +       +   + +  W      +S  P L   
Sbjct: 125 SLWRRRAIDAMPQIELVLAVGHYAQRWHLGQGCPKSMTETVRNWRRYAKSNSGTPVLPLP 184

Query: 233 HPQELIQYPLI-KKNTW---HALITLKKALKNL 261
           HP    +     ++N W     L  L++ +K L
Sbjct: 185 HPSW--RNTGWLRRNLWFETELLPFLREQVKAL 215


>gi|332675639|gb|AEE72455.1| uracil-DNA glycosylase [Propionibacterium acnes 266]
          Length = 278

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/245 (11%), Positives = 59/245 (24%), Gaps = 42/245 (17%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P+       +              +     +   + A  IA       +L + +  F  C
Sbjct: 5   PHPRIATLFESPVAPGSGWPGDPASPDTPVAKCAEDAARIAAHCSEFEDLDATISVFRAC 64

Query: 91  HLCSTSL------------------STICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131
                                      + +       ++IIG  P+    N +G+ F+G 
Sbjct: 65  PRLVKWREDIAVTKRAQWRDEPYWGRPVPSFGDPSARMVIIGLAPAAHGANRTGRMFTGD 124

Query: 132 -TGNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177
            +G+ L + L              +  +      I       PP N    + +       
Sbjct: 125 QSGDWLYRALYDANIASQAQSIDAADGLTLHDCRIIAPVHCAPPDNWPRPDEKRTCAIWF 184

Query: 178 IMRQIELISPKILLFIGNKTKNFFF--------NNDAQKTYQNLGKWSNLCTPHSIIPTL 229
                 L + + ++ +G                           G  + L  P   I  +
Sbjct: 185 DDELARLTALRAVMCLGQIAWTSTLAAARRLGWQVPRPAPRFGHGTRTQLVRPDGSIIVV 244

Query: 230 -ATVH 233
               H
Sbjct: 245 LGCYH 249


>gi|298242040|ref|ZP_06965847.1| Uracil-DNA glycosylase superfamily [Ktedonobacter racemifer DSM
           44963]
 gi|297555094|gb|EFH88958.1| Uracil-DNA glycosylase superfamily [Ktedonobacter racemifer DSM
           44963]
          Length = 210

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 62/173 (35%), Gaps = 19/173 (10%)

Query: 75  CSLHELKSLLRSFHDCHLCST--SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
             L  L++ +++   C           I +       + +IG  P      + KP+SG  
Sbjct: 14  EDLQVLQTQIKACRRCQEAGYIPCAQPIVS-GRIADQVFVIGQAPGHRSVANNKPWSGPA 72

Query: 133 GNMLDKMLQ----SIEIMRTQIHISMISPW------HPPGNRNLSNIEMEICRPIIMRQI 182
           G +L + L+        +    ++S ++           G+R  S  E E+CRP +  ++
Sbjct: 73  GLLLQRWLEQAGFPAGYLYEHAYLSSLTHCDPGKNPRGNGDRKPSRQETELCRPFLDAEL 132

Query: 183 ELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
            L+ P+++L +G      FF     +            T       L   HP 
Sbjct: 133 RLVQPRVVLLVGTMAIETFFGKTRLED------LIGTYTERDGTLFLPLPHPS 179


>gi|289428569|ref|ZP_06430253.1| uracil-DNA glycosylase, family 4 [Propionibacterium acnes J165]
 gi|295130795|ref|YP_003581458.1| uracil-DNA glycosylase, family 4 [Propionibacterium acnes SK137]
 gi|289158263|gb|EFD06482.1| uracil-DNA glycosylase, family 4 [Propionibacterium acnes J165]
 gi|291375413|gb|ADD99267.1| uracil-DNA glycosylase, family 4 [Propionibacterium acnes SK137]
          Length = 278

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/245 (11%), Positives = 59/245 (24%), Gaps = 42/245 (17%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P+       +              +     +   + A  IA       +L + +  F  C
Sbjct: 5   PHPRIATLFESPVAPGSGWPGDPASPDTPVAKCAEDAARIAAHCSEFEDLDATISVFRAC 64

Query: 91  HLCSTSL------------------STICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131
                                      + +       ++IIG  P+    N +G+ F+G 
Sbjct: 65  PRLVKWREDIAVTKRAQWRDEPYWGRPVPSFGDPSARMVIIGLAPAAHGANRTGRMFTGD 124

Query: 132 -TGNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177
            +G+ L + L              +  +      I       PP N    + +       
Sbjct: 125 QSGDWLYRALYDADIASQAQSIDAADGLTLHDCRIIAPVHCAPPDNWPRPDEKRTCAIWF 184

Query: 178 IMRQIELISPKILLFIGNKTKNFFF--------NNDAQKTYQNLGKWSNLCTPHSIIPTL 229
                 L + + ++ +G                           G  + L  P   I  +
Sbjct: 185 DDELARLTALRAVMCLGQIAWTSTLAAARRLGWQVPRPAPRFGHGTRTQLVRPDGSIIVV 244

Query: 230 -ATVH 233
               H
Sbjct: 245 LGCYH 249


>gi|134097455|ref|YP_001103116.1| uracil-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338]
 gi|291004553|ref|ZP_06562526.1| uracil-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338]
 gi|133910078|emb|CAM00190.1| uracil-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338]
          Length = 256

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 75/254 (29%), Gaps = 48/254 (18%)

Query: 53  ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL--------------- 97
           I     +    V+   + A  A  L EL   +     C                      
Sbjct: 2   IPGPSRLIDDPVEDPSAAAGGAADLGELDEAITRCTACPRLVAWREEVAMVKRAAFRDQP 61

Query: 98  ---STICATQTEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKMLQ----------- 141
                +         L I+G  P+    N +G+ F+G ++G++L + +            
Sbjct: 62  YWGRPVPGFGPADAALGIVGLAPAAHGANRTGRMFTGDRSGDVLYRAMYDVGLASQPEAH 121

Query: 142 --SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKT 197
                ++     I       PP     +  E + C P + R++EL+ P  + ++ +G   
Sbjct: 122 GLDDGLVLRGARIVSPVRCAPP-ANKPTPGERDTCAPWLARELELLRPTLRAVVVLGAFG 180

Query: 198 KNFFFN--------NDAQKTYQNLGKWSNLCTPHSIIP--TLATVHPQELIQYPLIKKNT 247
                           + +     G  + L       P   L   H  +  +     K T
Sbjct: 181 WQALLPILGAAAWRIPSPRPKFGHGAHAELPAADGGPPLHLLGCYHVSQ--RNTQTGKLT 238

Query: 248 WHALITLKKALKNL 261
              L  + +  K+L
Sbjct: 239 PEMLRAVLEQAKDL 252


>gi|325523778|gb|EGD02026.1| phage SPO1 DNA polymerase-related protein [Burkholderia sp. TJI49]
          Length = 74

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 18/63 (28%), Gaps = 5/63 (7%)

Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253
           G          DA       G+          +P + T HP  L++    K   W  L  
Sbjct: 1   GRFAAQTLLKTDASIAS-LRGRVHAYE----GVPVIVTYHPAYLLRSLQDKSKAWADLCL 55

Query: 254 LKK 256
            + 
Sbjct: 56  ARD 58


>gi|159041387|ref|YP_001540639.1| uracil-DNA glycosylase superfamily protein [Caldivirga
           maquilingensis IC-167]
 gi|157920222|gb|ABW01649.1| Uracil-DNA glycosylase superfamily [Caldivirga maquilingensis
           IC-167]
          Length = 231

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/207 (12%), Positives = 60/207 (28%), Gaps = 39/207 (18%)

Query: 80  LKSLLRSFHDCHLC----------------STSLSTICATQTE-GQDLMIIGYTPSDSD- 121
           L++L+ + + C                         +          +MI+G  P+    
Sbjct: 11  LRNLI-NCNYCERLVRYRVTVPPLPRFSNDEYWRKPVPPWGDLSNPRIMIVGLAPAAHGG 69

Query: 122 NISGKPFSGKTG-NMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLS 167
           N +G+ F+G      L K L +  +                  +I+ +    PP N+   
Sbjct: 70  NRTGRMFTGDASAQFLFKALHACGLSNNPYSLSRIDGTKVNCVYITSVVKCAPPDNKPTP 129

Query: 168 NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227
                      + +I ++ P+ ++ +G             +     G    +    + + 
Sbjct: 130 GEVKACVGRWFINEINMVKPRAIVVLGEVAWRGVAMALGLRGGFKHGGV--VKINDTAVY 187

Query: 228 TLATVHPQELIQYPLIKKNTWHALITL 254
              + HP    +     +     L+ +
Sbjct: 188 M--SYHPSP--RNTNTGRLRLSDLVNI 210


>gi|171185625|ref|YP_001794544.1| uracil-DNA glycosylase superfamily protein [Thermoproteus
           neutrophilus V24Sta]
 gi|170934837|gb|ACB40098.1| Uracil-DNA glycosylase superfamily [Thermoproteus neutrophilus
           V24Sta]
          Length = 206

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 68/202 (33%), Gaps = 33/202 (16%)

Query: 84  LRSFHDC-HLCSTSL--------STICATQTEGQDLMIIGYTPSDSD-NISGKPFSG-KT 132
           L +   C  L               +    +    +M++G  P+    N +G+ F+G ++
Sbjct: 10  LTACRACSRLVEYRSSFPPGYWAKPVPPWGS--GPIMVVGLAPAARGGNRTGRMFTGDRS 67

Query: 133 GNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIM 179
              L + L             +   +    ++I+      PPGN   +  E++ C   + 
Sbjct: 68  SQNLFRALYEAGLASRPYSISRDDGVELHGVYITSAVKCAPPGN-KPTAEEVKNCSRWLR 126

Query: 180 RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
            ++E++ P++++ +G             +     G         + +  +   HP    +
Sbjct: 127 EEVEIVKPRVVVALGRVAWRALSEILGVREEFRHG----AVVEKNGVYLVGAYHPSP--R 180

Query: 240 YPLIKKNTWHALITLKKALKNL 261
                + T   L  + K  K L
Sbjct: 181 NINTGRTTVEELAEVFKLAKRL 202


>gi|326384729|ref|ZP_08206406.1| hypothetical protein SCNU_17395 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326196537|gb|EGD53734.1| hypothetical protein SCNU_17395 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 246

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 55/177 (31%), Gaps = 36/177 (20%)

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL------------------STICA 102
           S   + A   A +  SL  L  L+     C                           +  
Sbjct: 2   SRRAESAPDRAARIRSLTALDDLVADCRACPRLVAWREEVAATKRAAFRDQTYWGRAVPG 61

Query: 103 TQTEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKMLQS-------------IEIMR 147
                  ++I+G  P+    N +G+ F+G ++G+ L   L +               +  
Sbjct: 62  FGPGDARILIVGLAPAAHGANRTGRMFTGDRSGDFLFAALHAVGLASQSVAVSADDGLEL 121

Query: 148 TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFF 202
               I+      PP     +  E   C P + R++EL++P  +  + +G        
Sbjct: 122 FGTRITSPVHCAPP-ANKPTPEERRRCAPFLGRELELLAPSLRAAVVLGGFGWQALL 177


>gi|163744058|ref|ZP_02151425.1| uracil-DNA glycosylase, putative [Phaeobacter gallaeciensis 2.10]
 gi|161382674|gb|EDQ07076.1| uracil-DNA glycosylase, putative [Phaeobacter gallaeciensis 2.10]
          Length = 197

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 67/202 (33%), Gaps = 25/202 (12%)

Query: 76  SLHELKSLLRSFHDCHLCSTSL------STICATQTEGQDLMIIGYTPSDSDNISGKPFS 129
           +  +L+  +R+   C     +         +         ++I G  P    + SG+PF+
Sbjct: 3   TTEDLRQEIRACRLCAGRFAATVTRHSPRPVVWF-DSAARILIAGQAPGARVHDSGRPFT 61

Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186
             +G+ L + L   ++    ++ + I  ++   P  +   +++              + +
Sbjct: 62  DPSGDRLREWLGLSEAQFYDQSLVAIVPMAFCFPGYSAKKADLPPPAICRTTWHDRVMDT 121

Query: 187 PKIL---LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI 243
              +   + +G    ++          Q  G W +              HP    +    
Sbjct: 122 LPNIGLRVLVGGYAHSYHLGGKQSVQAQVEG-WRDHAPQE-----FPLPHPSW--RNTAW 173

Query: 244 -KKNTW--HALI-TLKKALKNL 261
            K+N W    L+  L+  ++ L
Sbjct: 174 LKRNPWFETDLLPVLRARVQEL 195


>gi|253681175|ref|ZP_04861976.1| uracil DNA glycosylase superfamily protein [Clostridium botulinum D
           str. 1873]
 gi|253562611|gb|EES92059.1| uracil DNA glycosylase superfamily protein [Clostridium botulinum D
           str. 1873]
          Length = 141

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 54/145 (37%), Gaps = 18/145 (12%)

Query: 131 KTGNMLDKMLQSIEIMRTQIHISMISPWHPPG------------NRNLSNIEMEICRPII 178
             G   +  L+SI + R+++ I+    + P              NR     E+ + R ++
Sbjct: 1   MAGETFNNYLKSIGLSRSEVRITNTCFFRPIKKKVGKTGRTTISNRPPKVSEVNLFREVL 60

Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238
             +I  ++PKI++ +GN         + +      G        +  I      HP  L 
Sbjct: 61  DDEINFVNPKIIITLGNVPLKRL--TEFKSIGDCHGNL--YYNENLKINIFPMYHPSALT 116

Query: 239 --QYPLIKKNTWHALITLKKALKNL 261
             +    KK   +  + LK+ LK +
Sbjct: 117 YNRNDEFKKMYENDWLKLKEVLKTI 141


>gi|257467426|ref|ZP_05631737.1| DNA polymerase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315918550|ref|ZP_07914790.1| DNA polymerase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313692425|gb|EFS29260.1| DNA polymerase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 191

 Score = 70.2 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 68/186 (36%), Gaps = 12/186 (6%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             ELK    S  +  L    L  +        D++I+G  P    N + K   G +G  L
Sbjct: 8   WEELKYGAASIGNTILKPHQLEVLIGGGNPDSDILILGDDPELYLNENLKTKEGSSGEFL 67

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
             +L+   I +  I++S +S       ++    + E  + +++ QI L+SPK+++ +G +
Sbjct: 68  YLLLEFCGIQKEDIYVSTLSK-RNARLKDFMPEDYEKLKELLICQIGLLSPKVIVCLGYE 126

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL--IQYPLIKK-----NTWH 249
                         ++  +          I    T     +   +  L KK        +
Sbjct: 127 AAQMLL-EKEINLEKDRQEVFTWKA---GIQVFVTYDVNTVKKARAELGKKAKLALEFRN 182

Query: 250 ALITLK 255
            L  L+
Sbjct: 183 DLKKLQ 188


>gi|254453441|ref|ZP_05066878.1| uracil-DNA glycosylase superfamily [Octadecabacter antarcticus 238]
 gi|198267847|gb|EDY92117.1| uracil-DNA glycosylase superfamily [Octadecabacter antarcticus 238]
          Length = 199

 Score = 70.2 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 64/199 (32%), Gaps = 27/199 (13%)

Query: 80  LKSLLRSFHDCHLCSTSLSTICA-----TQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L+  + +   C     +  T  +            L+I+G  P      SG PF+  +G+
Sbjct: 3   LRHQITACTLCADRFAATQTAHSPRPIVWFEPTARLLIVGQAPGKKVYKSGCPFTDPSGD 62

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNR-----NLSNIEMEICRPIIMRQIELIS 186
            L   L   ++    R+ + I  ++   P  ++         +  +     +M  +  + 
Sbjct: 63  RLRDWLGVDETTFYDRSNVTIVPMAFCFPGNDKAGSDLPPPKVCGQTWHDSVMADLPDVK 122

Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KK 245
            +  + +G     +        T    G W +         T    HP    +     KK
Sbjct: 123 LR--ILVGASAHRYHLGVKTSATETVAG-WRDHAPD-----TFVLPHPSW--RNTAWLKK 172

Query: 246 NTW---HALITLKKALKNL 261
           N W     L  L+  +K +
Sbjct: 173 NPWFGAQVLPALRVRVKEV 191


>gi|86609874|ref|YP_478636.1| uracil-DNA glycosylase family protein [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86558416|gb|ABD03373.1| putative uracil-DNA glycosylase, family 4 [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 240

 Score = 70.2 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 69/231 (29%), Gaps = 37/231 (16%)

Query: 65  QQADSIAQKACSLHELKSLLRSFHDCHLCSTSL------------------STICATQTE 106
               S A        L++ + S   C                           +      
Sbjct: 2   TTRRSEALGLQDWATLQTEIVSCCRCPRLVAWRESVALQKVARFRDQLYWGRPVPGFGDP 61

Query: 107 GQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKML-------------QSIEIMRTQIH 151
              L +IG  P+    N +G+ F+G   G+ L + L             +   +     +
Sbjct: 62  QARLWVIGLAPAAHGGNRTGRVFTGDPSGDWLFRALYRAGFANQPTSTHREDGLQLQDCY 121

Query: 152 ISMISPWHPPGNRNLSNIEMEICRPIIMRQIEL-ISPKILLFIGNKTKNFFFNNDAQKTY 210
           IS +    PP N   + IE + C   + +++EL    +++L +G+               
Sbjct: 122 ISAVVRCVPPEN-RPTAIEAKTCLGYLKQELELLTQVRVILTLGHFAFQHALTLLPPLRP 180

Query: 211 QNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
           +     + +         LA+ HP    +    +  T   L  +    + L
Sbjct: 181 RPRFGHNCVIPLAEGRYLLASYHPS--RRNTATRLLTEPMLDAVFAQAQQL 229


>gi|328907525|gb|EGG27291.1| uracil-DNA glycosylase, family 4 [Propionibacterium sp. P08]
          Length = 278

 Score = 70.2 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/274 (12%), Positives = 68/274 (24%), Gaps = 46/274 (16%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P+       +              +     +   +    IA       +L + +     C
Sbjct: 5   PHPRTADLFESPVPPGTGWPGDPASPDTPVAKNAEDVARIAAHCGKFEDLDAAISVCRAC 64

Query: 91  HLCSTSL------------------STICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131
               T                        +       + IIG  P+    N +G+ F+G 
Sbjct: 65  PRLVTWREDTAVTKRAQWRDEPYWGRPAPSFGDPSARMAIIGLAPAAHGANRTGRMFTGD 124

Query: 132 -TGNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177
            +G+ L + L              +  +      I       PP N   S  E   C   
Sbjct: 125 QSGDWLYRALNDAGIASQAQSIDAADGLTLHDCRIIAPVHCAPPDNW-PSPDEKRTCAIW 183

Query: 178 IMRQIELISP-KILLFIGNKTKNFFF--------NNDAQKTYQNLG-KWSNLCTPHSIIP 227
              ++  +   + ++ +G                           G +   +    ++I 
Sbjct: 184 FDHELARLITMRAVMCLGQIAWTSTLAAARRLDWQVPRPAPRFGHGARTQLIRPDGAVIV 243

Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
            L   H     Q     + T   L  +   L++L
Sbjct: 244 VLGCYHVS--RQNTNTGRLTRTMLDDIVNTLQDL 275


>gi|296271083|ref|YP_003653715.1| uracil-DNA glycosylase superfamily protein [Thermobispora bispora
           DSM 43833]
 gi|296093870|gb|ADG89822.1| Uracil-DNA glycosylase superfamily [Thermobispora bispora DSM
           43833]
          Length = 268

 Score = 70.2 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/235 (12%), Positives = 64/235 (27%), Gaps = 44/235 (18%)

Query: 44  KSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLST---- 99
                            +    +   +A ++ +L EL +       C        T    
Sbjct: 5   PPGSGWPGDPAAPETPVAHGAAEVAKLAAESRTLGELTARQSVCRACPRLVEWRETVADV 64

Query: 100 --------------ICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKML--- 140
                         +     E    +I+G  P+    N +G+ F+G ++G+ L   L   
Sbjct: 65  KRRAFATERYWGRPVPGWGEERPHTVIVGLAPAAHGGNRTGRIFTGDRSGDWLFASLYRT 124

Query: 141 ----------QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE--LISPK 188
                      +         +       PP     ++ E + CRP + R++     S +
Sbjct: 125 GLAAQETSTHAADGQRLLGARVLAAVRCAPP-ANRPTSEERDACRPWLSRELALVAESVR 183

Query: 189 ILLFIGNKTKNFF------FNNDAQKTYQNLGKWSNLCTPHSIIPT--LATVHPQ 235
           +++ +G    +                    G  + +   +       L   HP 
Sbjct: 184 VIVALGGFAWDALWPALADAGFTRPPRRPRFGHGAEVALEYRGAKVTLLGCYHPS 238


>gi|254293926|ref|YP_003059949.1| uracil-DNA glycosylase superfamily [Hirschia baltica ATCC 49814]
 gi|254042457|gb|ACT59252.1| Uracil-DNA glycosylase superfamily [Hirschia baltica ATCC 49814]
          Length = 223

 Score = 69.8 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/209 (11%), Positives = 56/209 (26%), Gaps = 32/209 (15%)

Query: 82  SLLRSFHDCH-----LCSTSLS-------TICATQTEGQDLMIIGYTPSDSD-NISGKPF 128
                   C      L              + +       L+I+G  P  +  N + +PF
Sbjct: 8   EAPSDCDRCPRLVEYLEEYRAKEPNWFNAPVPSFGPSNAKLLIVGLAPGVTGANRTARPF 67

Query: 129 SGKT-GNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSNIEMEIC 174
           +G   G++L   ++     + +               I+      PP N+          
Sbjct: 68  TGDYAGDLLYATIEKFGFSKGKYDSRSDDGLELVDAMITNAVRCVPPQNKPTGPEINNCR 127

Query: 175 RPIIMRQIELISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231
             ++ R   L   K++L +G    +                      L  P+  +  + +
Sbjct: 128 PFLVSRMQHLPQLKVILALGKIAHDSTVRTLGGKLSNYKFAHAAIHKLNGPNGALTMIDS 187

Query: 232 VHPQELIQYPLIKKNTWHALITLKKALKN 260
            H           + T      +   +++
Sbjct: 188 YHCS--RYNTNTGRLTTEMFENVFSRIQS 214


>gi|229819525|ref|YP_002881051.1| Uracil-DNA glycosylase superfamily [Beutenbergia cavernae DSM
           12333]
 gi|229565438|gb|ACQ79289.1| Uracil-DNA glycosylase superfamily [Beutenbergia cavernae DSM
           12333]
          Length = 294

 Score = 69.8 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/238 (11%), Positives = 60/238 (25%), Gaps = 45/238 (18%)

Query: 40  QRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLST 99
                        +   R   +      + +A  + +L +L +       C         
Sbjct: 21  ASPVPPGAGWPDDVATARTPRARDAAAVERLAATSRTLTQLDARSSVCRACPRLVAWRED 80

Query: 100 I------------------CATQTEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKM 139
           +                           L+I+G  P+    N +G+ F+G ++G+ +   
Sbjct: 81  VAHTKRRAFAAEPYWGRPAPGLGDPAAHLVIVGLAPAAHGANRTGRLFTGDRSGDWIVAA 140

Query: 140 LQSIEIMRTQIH-------------ISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186
           L                        I       PP N   +  E   C   + R+++L++
Sbjct: 141 LHRAGYANQPTTEAAGDGLELRGARIVAAVRCAPPDN-APTPDERATCAGWLRRELQLLA 199

Query: 187 PKILLF--IGNKTKNFF------FNNDAQKTYQNLGKWSNLCTP---HSIIPTLATVH 233
           P       +G                   +     G  +           +  +A+ H
Sbjct: 200 PTTTALLALGQVAWQATFAALKDLGWSVPRPRPAFGHGARASVRAPDGREVLVVASYH 257


>gi|99080497|ref|YP_612651.1| uracil-DNA glycosylase superfamily protein [Ruegeria sp. TM1040]
 gi|99036777|gb|ABF63389.1| Uracil-DNA glycosylase superfamily [Ruegeria sp. TM1040]
          Length = 200

 Score = 69.8 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 63/200 (31%), Gaps = 27/200 (13%)

Query: 78  HELKSLLRSFHDCHLCSTSLST------ICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
            ELK  + +   C     S  T      +         ++I G  P    + SG+PF+  
Sbjct: 6   DELKKEISACRLCAARFASTRTAHEPRPVVWF-EPSARILIAGQAPGMRVHQSGRPFTDS 64

Query: 132 TGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI---CRPIIMRQIELI 185
           +G+ L + L   +      +++ I  ++   P  +   +++                 L 
Sbjct: 65  SGDRLREWLGLSEDCFYDTSRVAIVPMAFCFPGYDAKTADLPPPRICGETWHDRVMSALG 124

Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHP-----QELIQY 240
             ++ + +G     +        T    G W +L          A  HP       L + 
Sbjct: 125 KLRLRILVGGHAHRYHLGTRLGVTELVKG-WRSLPEG-----VFALPHPSWRNTAWLKRN 178

Query: 241 PLIKKNTWHALITLKKALKN 260
           P  +      L  L+  +K 
Sbjct: 179 PWFEAEL---LPVLRARVKE 195


>gi|257453014|ref|ZP_05618313.1| DNA polymerase [Fusobacterium sp. 3_1_5R]
 gi|317059554|ref|ZP_07924039.1| DNA polymerase [Fusobacterium sp. 3_1_5R]
 gi|313685230|gb|EFS22065.1| DNA polymerase [Fusobacterium sp. 3_1_5R]
          Length = 191

 Score = 69.8 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 67/185 (36%), Gaps = 12/185 (6%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             ELK    S  +  L    L  +        D++I+G  P    N + K   G +G  L
Sbjct: 8   WEELKYGAASIGNTILKPHQLEVLIGGGNPDSDILILGDDPELYLNENLKTKEGSSGEFL 67

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
             +L+   I +  I++S +S       ++    + E  + +++ QI L+SPK+++ +G +
Sbjct: 68  YLLLEFCGIQKEDIYVSTLSK-RNARLKDFMPEDYEKLKELLICQIGLLSPKVIVCLGYE 126

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL--IQYPLIKK-----NTWH 249
                         ++  +          I    T     +   +  L KK        +
Sbjct: 127 AAQMLL-EKEINLEKDRQEVFTWKA---GIQVFVTYDVNTVKKARAELGKKAKLALEFRN 182

Query: 250 ALITL 254
            L  L
Sbjct: 183 DLKKL 187


>gi|108802450|ref|YP_642646.1| uracil-DNA glycosylase superfamily protein [Mycobacterium sp. MCS]
 gi|119855276|ref|YP_935879.1| uracil-DNA glycosylase superfamily protein [Mycobacterium sp. KMS]
 gi|108772869|gb|ABG11590.1| Uracil-DNA glycosylase superfamily [Mycobacterium sp. MCS]
 gi|119697993|gb|ABL95064.1| Uracil-DNA glycosylase superfamily [Mycobacterium sp. KMS]
          Length = 155

 Score = 69.4 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 60/142 (42%), Gaps = 2/142 (1%)

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170
           M++G +       +  PF+G +G  LD+ L +  + +  I  + +   HPP NR     E
Sbjct: 1   MVVGQSLCGPCMATQIPFTGGSGRFLDRALTAAGLAKADIFTTNVVHCHPPNNRPSLQHE 60

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFF--FNNDAQKTYQNLGKWSNLCTPHSIIPT 228
           +  CRP + R+I++++P++++ +G   +         A        +     T       
Sbjct: 61  ITNCRPYLRREIDIVTPRLIIALGRDARAALEYLLPTAPVQPWPFTRLPKAPTDADSPLL 120

Query: 229 LATVHPQELIQYPLIKKNTWHA 250
           L   HP  + + P   ++ +  
Sbjct: 121 LFAPHPSWIARQPRPDQDAYVD 142


>gi|218672130|ref|ZP_03521799.1| probable uracil-DNA glycosylase protein [Rhizobium etli GR56]
          Length = 210

 Score = 69.4 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 60/191 (31%), Gaps = 20/191 (10%)

Query: 75  CSLHELKSLLRSFHDCHLC--STSLSTICATQTE------GQDLMIIGYTPSDSDNISGK 126
             L  L+  + +   C       +   +               ++I G  P    + SG 
Sbjct: 5   AELETLRREIAACRICRDAPAKGAARRLPHEPRPVAVISSNARILIAGQAPGLRVHESGL 64

Query: 127 PFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSN-IEMEICRPIIMRQI 182
           PF   +G+ L   L   ++    R +  I  +    P  +   ++      C P   +++
Sbjct: 65  PFDDASGDRLRSWLGVDRATFYDRDRFAIVPMGFCFPGYDDKGADLPPRRECAPFWRQRV 124

Query: 183 ELISPKI--LLFIGNKTKNFFF--NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238
               P+I  +L IG   + +          T    G W +          L   HP    
Sbjct: 125 ISAMPQIELVLVIGQYAQAWHMAGGGRGGMTETVRG-WRDSLMSGRSPAVLPLPHPSW-- 181

Query: 239 QYPLI-KKNTW 248
           +     K+N+W
Sbjct: 182 RNSGWLKRNSW 192


>gi|86160049|ref|YP_466834.1| uracil-DNA glycosylase superfamily protein [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|85776560|gb|ABC83397.1| Uracil-DNA glycosylase superfamily [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 226

 Score = 69.4 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 63/200 (31%), Gaps = 39/200 (19%)

Query: 74  ACSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLMIIGY 115
           A +L  + + +     C                           I         + ++G 
Sbjct: 2   ADTLSAVAAEVVRCRACPRLVAWREQVAREKRRAYRDEVYWGRPIPGFGDARARIALVGL 61

Query: 116 TPSDSD-NISGKPFSG-KTGNMLDKMLQ-------------SIEIMRTQIHISMISPWHP 160
            P     N +G+ F+G ++G+ L   L                 +      I+      P
Sbjct: 62  APGAHGSNRTGRMFTGDRSGDFLYAALHRAGLASQPSSRARDDGLALEGAWITSACRCAP 121

Query: 161 PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK---TKNFFFNNDAQKTYQNLGKW- 216
           P N   +  E+E C P + R++ L++P++L+ +G+              ++  +   ++ 
Sbjct: 122 PDN-RPTPDELERCAPFLDRELALLAPRVLVALGSVGWDAILAALRRAGRELPRPRPRFG 180

Query: 217 SNLCTPHSIIP-TLATVHPQ 235
                    +P  L   HP 
Sbjct: 181 HGAELRLPGLPAVLGCYHPS 200


>gi|163737724|ref|ZP_02145141.1| Uracil-DNA glycosylase superfamily protein [Phaeobacter
           gallaeciensis BS107]
 gi|161389250|gb|EDQ13602.1| Uracil-DNA glycosylase superfamily protein [Phaeobacter
           gallaeciensis BS107]
          Length = 197

 Score = 69.4 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/199 (13%), Positives = 66/199 (33%), Gaps = 25/199 (12%)

Query: 79  ELKSLLRSFHDCHLCSTSL------STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
           +L+  +R+   C     +         +         ++I G  P    + SG+PF+  +
Sbjct: 6   DLRQEIRACRLCAGRFAATVTRHSPRPVVWF-DSAARILIAGQAPGARVHDSGRPFTDPS 64

Query: 133 GNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189
           G+ L + L   ++    ++ + I  ++   P  +   +++              + +   
Sbjct: 65  GDRLREWLGLSEAQFYDQSLVAIVPMAFCFPGYSAKKADLPPPAICRTTWHDRVMDTLPN 124

Query: 190 L---LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KK 245
           +   + +G    ++          +  G W +              HP    +     K+
Sbjct: 125 IGLRVLVGGYAHSYHLGGKQSVQARVEG-WRDHAPQE-----FPLPHPSW--RNTAWLKR 176

Query: 246 NTW--HALI-TLKKALKNL 261
           N W    L+  L+  ++ L
Sbjct: 177 NPWFETDLLPVLRARVQEL 195


>gi|111022904|ref|YP_705876.1| hypothetical protein RHA1_ro05941 [Rhodococcus jostii RHA1]
 gi|110822434|gb|ABG97718.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
          Length = 237

 Score = 69.4 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/207 (12%), Positives = 57/207 (27%), Gaps = 44/207 (21%)

Query: 70  IAQKACSLHELKSLLRSFHDCHLCSTSLSTI------------------CATQTEGQDLM 111
           +      +  L + L     C        T+                           L+
Sbjct: 1   MGAALTDIAGLDAQLIECRACPRLVEWRETVAREKRASFRDETYWGRPVPGFGPPDASLL 60

Query: 112 IIGYTPSDSD-NISGKPFSG-KTGNMLDKMLQS-------------IEIMRTQIHISMIS 156
           I+G  P+    N +G+ F+G ++G+ L   L +               +    + I+   
Sbjct: 61  IVGLAPAAHGANRTGRMFTGDRSGDFLYAALHAVGLASQPTATHIGDGLELFGVRITSPV 120

Query: 157 PWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFF--------NNDA 206
              PP     + +E + CR  +  ++ ++ P  + ++ +G                    
Sbjct: 121 HCAPP-ANKPTPVERDNCRHWLDAELRILQPHLRSVIVLGGFGWQSLLPVLDDAGWAVPR 179

Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVH 233
            +     G    L      +      H
Sbjct: 180 PRPKFGHGAHVELPGAERPLHLFGCYH 206


>gi|15965633|ref|NP_385986.1| hypothetical protein SMc04210 [Sinorhizobium meliloti 1021]
 gi|307314037|ref|ZP_07593650.1| Uracil-DNA glycosylase superfamily [Sinorhizobium meliloti BL225C]
 gi|307321214|ref|ZP_07600616.1| Uracil-DNA glycosylase superfamily [Sinorhizobium meliloti AK83]
 gi|15074814|emb|CAC46459.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
 gi|306893116|gb|EFN23900.1| Uracil-DNA glycosylase superfamily [Sinorhizobium meliloti AK83]
 gi|306899159|gb|EFN29798.1| Uracil-DNA glycosylase superfamily [Sinorhizobium meliloti BL225C]
          Length = 209

 Score = 69.4 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 64/214 (29%), Gaps = 33/214 (15%)

Query: 73  KACSLHELKSLLRSFHDCHLCSTSLSTICATQTE-------------GQDLMIIGYTPSD 119
               L  L++ +     C                                ++I G  P  
Sbjct: 2   TEEQLQALRAAISVCRRCRDEPAR-----GEGHRLPHEPRPVAVLSASARILIAGQAPGL 56

Query: 120 SDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEI 173
             + SG PF+  +G+ L + L   ++    +    I  +      +     +L       
Sbjct: 57  RVHESGLPFNDASGDRLRQWLSVDRAAFYDQRNFAIVPMGFCFPGYDRHGSDLPPRSECA 116

Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNND-AQKTYQNLGKWSNLCTPHSIIPTLATV 232
                     +   +++L +G+  + +    D  +   + +  W      +S I  L   
Sbjct: 117 PLWRQRAMDAMPQIELVLAVGHYAQRWHLGTDCPKSMTETVRNWQRYAKRNSGISVLPLP 176

Query: 233 HPQ-----ELIQYPLIKKNTWHALITLKKALKNL 261
           HP       L ++P  +      L  L++ ++ L
Sbjct: 177 HPSWRNTGWLRRHPWFEAEL---LPFLRERVQAL 207


>gi|126728254|ref|ZP_01744070.1| Uracil-DNA glycosylase superfamily protein [Sagittula stellata
           E-37]
 gi|126711219|gb|EBA10269.1| Uracil-DNA glycosylase superfamily protein [Sagittula stellata
           E-37]
          Length = 197

 Score = 69.4 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 64/200 (32%), Gaps = 22/200 (11%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQT-----EGQDLMIIGYTPSDSDNISGKPFSG 130
            L  L + +R    C     +  T  A Q          L+I G  P    + SGKPF+ 
Sbjct: 3   DLSALIADVRGCRLCEQRFAATETAHAPQPVLRAQPSARLLIAGQAPGMKVHHSGKPFTD 62

Query: 131 KTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR--QIELI 185
            +G+ L   L          T++ I  +    P   +        IC           L 
Sbjct: 63  PSGDRLRDWLGLDAETFYDETRVAILPMGFCFPGYRKGSDLPPPAICARTWRASLMDRLS 122

Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-K 244
             ++ L IG   + +     +    Q +  W +          L   HP    +     K
Sbjct: 123 DVRLTLPIGGIAQRWHLGVTSNV-TQTVANWRDFLPD-----ALPLPHPSW--RNTGWLK 174

Query: 245 KNTW--HALI-TLKKALKNL 261
           +N W    L+  L+  ++ +
Sbjct: 175 RNPWFADDLLPVLRARVREV 194


>gi|297567525|ref|YP_003686497.1| Uracil-DNA glycosylase superfamily [Meiothermus silvanus DSM 9946]
 gi|296851974|gb|ADH64989.1| Uracil-DNA glycosylase superfamily [Meiothermus silvanus DSM 9946]
          Length = 221

 Score = 69.4 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 63/220 (28%), Gaps = 37/220 (16%)

Query: 76  SLHELKSLLRSFHDCHL------------------CSTSLSTICATQTEGQDLMIIGYTP 117
           +L  L + L S   C                           +        ++++ G  P
Sbjct: 2   NLSTLHAELVSCTRCPRLVGWRERVGREKRRAYLEWEYWAKPVPGFGDPQAEILLFGLAP 61

Query: 118 SDSD-NISGKPFSGK-TGNMLDKMLQS-------------IEIMRTQIHISMISPWHPPG 162
                N +G+PF+G  +G+ L   L                 +    ++I+      PP 
Sbjct: 62  GAHGSNRTGRPFTGDASGDFLYPALYRAGLANQPLSRHRGDGLELRHVYITSAVRCAPPD 121

Query: 163 NRNLSNIEMEICRPIIMRQIE-LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221
           N      E+  C     R++  L + ++ L IG        N  A +             
Sbjct: 122 N-KPLPEELRNCSAWTNRELPLLPNVRVYLAIGRVGHEALLNYHALRKSAYPFAHGAEFR 180

Query: 222 PHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
                  L T H     Q     K T   L T+ +  K L
Sbjct: 181 LPEGRVLLDTYHVS--RQNTNTGKLTAEMLDTVLERAKQL 218


>gi|222148516|ref|YP_002549473.1| hypothetical protein Avi_2054 [Agrobacterium vitis S4]
 gi|221735502|gb|ACM36465.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 211

 Score = 69.4 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 60/200 (30%), Gaps = 21/200 (10%)

Query: 74  ACSLHELKSLLRSFHDCHLCSTSLSTICATQTE------GQDLMIIGYTPSDSDNISGKP 127
              L  L++ + +   C  C T ++ +               ++I G  P    + +G P
Sbjct: 6   PRDLKGLRAAIHACRICRDCPTQVTALPHEPRPVVVLSSTARILIAGQAPGKRVHETGLP 65

Query: 128 FSGKTGNMLDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMR 180
           F+  +G+ L + L   +          I  +    P     G+      E          
Sbjct: 66  FNDASGDRLRQWLGVDREAFYDSRNFAILPMGFCFPGYDASGHDLPPRRECAPHWREAAM 125

Query: 181 QIELISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHS-IIPTLATVHPQ--- 235
           ++ +   +++L IG   + +   +      +  +  W      +      L   HP    
Sbjct: 126 EV-MPQVELVLAIGQYAQRWHMCDLRKPTLHATVESWRESFFTNRPGPKILPLPHPSWRN 184

Query: 236 --ELIQYPLIKKNTWHALIT 253
              L + P  +      L  
Sbjct: 185 SGWLRRNPWFEAELLPVLKK 204


>gi|313127673|ref|YP_004037943.1| uracil-DNA glycosylase [Halogeometricum borinquense DSM 11551]
 gi|312294038|gb|ADQ68498.1| uracil-DNA glycosylase [Halogeometricum borinquense DSM 11551]
          Length = 220

 Score = 69.4 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 21/168 (12%), Positives = 51/168 (30%), Gaps = 18/168 (10%)

Query: 85  RSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSD----SDNISGKPFSGK------TG 133
                C  L +          +    +M++G  P      ++   G   +G       +G
Sbjct: 31  ADCTRCPELVACRTRISWGNGSSDASVMVVGEAPGAGDPDAEQWQGGNHTGMAYTTRHSG 90

Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI----EMEICRPIIMRQIELISPKI 189
             + K++ +        + +      P      +      E   CR  +  +++ I P++
Sbjct: 91  RRIRKLIAAAGHA--DAYYTNAVKCVPCDGDGSNREPTATERANCRTHLDTELDAIEPEV 148

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSN-LCTPHSIIPTLATVHPQE 236
           ++  G          D ++    L    + +      +  L  +HP  
Sbjct: 149 VVSTGKHATATMLAFDGRELDGFLDTVLDPVELDAFDVMLLPLLHPSY 196


>gi|251796290|ref|YP_003011021.1| uracil-DNA glycosylase superfamily [Paenibacillus sp. JDR-2]
 gi|247543916|gb|ACT00935.1| Uracil-DNA glycosylase superfamily [Paenibacillus sp. JDR-2]
          Length = 197

 Score = 69.4 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 66/196 (33%), Gaps = 27/196 (13%)

Query: 76  SLHELKSLLRSFHDCHLCSTSL-STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           S HE+K  + S  DC          +         +M IG  PS   + SG PF+  +G 
Sbjct: 2   SFHEIKEQIISCQDCKQKFGFTPHPVF-HGKAQSKIMQIGQAPSKKVHESGLPFNDPSGA 60

Query: 135 MLDKMLQ----SIEIMRTQIHISMISPWHPPGNRN--LSNIEMEICRPIIMRQIELISPK 188
            L         ++       +++ ++   P  +     +   +      + ++IE++  +
Sbjct: 61  KLKYQWYQITDAMFYNEDNFYMTGLAHCFPGKHPKGGDNPPPLACANKWLAKEIEMVDNE 120

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL----------- 237
           I + IG +   + F   + +               +  P L   HP  L           
Sbjct: 121 IYIIIGARAAKYLFPKRSFEDLVLK------NNQINGKPALVLPHPSPLNVRWFKTHPSF 174

Query: 238 --IQYPLIKKNTWHAL 251
              + P +++  W  L
Sbjct: 175 EEKRIPEVREMVWDVL 190


>gi|110668860|ref|YP_658671.1| hypothetical protein HQ2967A [Haloquadratum walsbyi DSM 16790]
 gi|109626607|emb|CAJ53071.1| conserved hypothetical protein [Haloquadratum walsbyi DSM 16790]
          Length = 211

 Score = 69.0 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 54/160 (33%), Gaps = 15/160 (9%)

Query: 86  SFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT-GNMLDKMLQSI 143
              +C  LC T  + +      G D + +   P    + +G PF+G   G  L  +L  +
Sbjct: 17  ECENCPGLCETRENVLHGYGDVGGDFIFVAERPHAGADQTGVPFTGDDAGRHLQTILGQL 76

Query: 144 EIMRTQI----------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
              RT             ++ ++    P      + E+  C P +  +I +I+P+I++ I
Sbjct: 77  GFARTPPDADEPDIQNAFLTYVTRCRHPDRTAT-DEEIRACEPYLNAEIRMINPEIIIPI 135

Query: 194 GNKTKNFFFNNDAQKTYQNLGKW--SNLCTPHSIIPTLAT 231
           G  T      +   +   +                  +  
Sbjct: 136 GETTLRELAIDYTTRRPDSFDIVEEHATTIRGRGFELVPM 175


>gi|311893795|dbj|BAJ26203.1| putative uracil-DNA glycosylase [Kitasatospora setae KM-6054]
          Length = 269

 Score = 69.0 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 59/196 (30%), Gaps = 36/196 (18%)

Query: 42  KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL---- 97
           +  +  +                    ++A +   L  L +L+     C           
Sbjct: 2   EPPAPPALPTRPDPNDPNDPNDPGYPAALAPRTRDLAALDALVVDCRACPRLVAWREETA 61

Query: 98  --------------STICATQTEGQDLMIIGYTPSDS-DNISGKPFSGKT-GNMLDKMLQ 141
                           I         L+++G  P+    N +G+ F+G   G++L   L 
Sbjct: 62  LTKRRAFREQEYWARPIPGFGPHDARLVLVGLAPAAHGGNRTGRIFTGDPSGDLLYASLH 121

Query: 142 -------------SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP- 187
                           +    + I+      PP N   SN E + CRP I+R+ E + P 
Sbjct: 122 RLGLANRPESHWRDDGLRLRGVRITDPVRCAPPEN-KPSNTERDTCRPWIVREFEQLRPT 180

Query: 188 -KILLFIGNKTKNFFF 202
            + ++ +G        
Sbjct: 181 VRAVVALGGFAWQAAL 196


>gi|269838087|ref|YP_003320315.1| uracil-DNA glycosylase superfamily [Sphaerobacter thermophilus DSM
           20745]
 gi|269787350|gb|ACZ39493.1| Uracil-DNA glycosylase superfamily [Sphaerobacter thermophilus DSM
           20745]
          Length = 225

 Score = 69.0 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 72/194 (37%), Gaps = 19/194 (9%)

Query: 54  TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCST--SLSTICATQTEGQDLM 111
           T     H        ++  +   L   ++ +R+   C           +      GQ +M
Sbjct: 8   TGEAMAHRVAEDLRITVEDRQRRLEAHQAAIRACTACVAAGFIPESRPVF-RGHTGQRIM 66

Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM----RTQIHISMISPWHP------P 161
           +IG  P++    +  P+SG +G  L + L            + +++ ++   P       
Sbjct: 67  VIGQAPAEHREENPIPYSGASGRTLRRWLAQAGFPEDALHERCYLTSLTKCFPGPSRSGK 126

Query: 162 GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221
           G+R  S  E+ +CRP +  +I L+ P+++L +G     +F  N      + L +      
Sbjct: 127 GDRAPSAREIALCRPHLEGEIALVQPEVILALGRLASTYFVGN------RPLAQLVGQSF 180

Query: 222 PHSIIPTLATVHPQ 235
            H     +   HP 
Sbjct: 181 THGTAVVVPLPHPS 194


>gi|302348695|ref|YP_003816333.1| Uracil-DNA glycosylase [Acidilobus saccharovorans 345-15]
 gi|302329107|gb|ADL19302.1| Uracil-DNA glycosylase [Acidilobus saccharovorans 345-15]
          Length = 244

 Score = 69.0 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 66/215 (30%), Gaps = 40/215 (18%)

Query: 81  KSLLRSFHDCHLCS------------------TSLSTICATQTEGQDLMIIGYTPSDS-D 121
           +  + S + C                           + +       ++++G  P+    
Sbjct: 25  QDAILSCNRCPRLRRFDVEVGLNPPRRFRGQAYWSRPVPSLGDPLAPIVVVGMAPAPHGG 84

Query: 122 NISGKPFSGK-TGNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLS 167
           N +G+ F+G  +GN   + L             +   +    ++I+      PP N    
Sbjct: 85  NRTGRMFTGDQSGNNFFRALYEACLANKPTSVSRDDGLQVYHVYITASLHCAPPDN-KPL 143

Query: 168 NIEMEICRPIIMRQIE-LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII 226
             E+  C P +  ++  L + ++ + +G    +        +     G  +    P    
Sbjct: 144 REEIGNCFPYLKEELSLLPNARVFVALGRLAFDQLCKVFNVRFEFKHG--AEYRLPD-GR 200

Query: 227 PTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
             +A+ HP    +       T   L  + +  K L
Sbjct: 201 WLIASYHPSP--RNVNTGTLTIEDLRNIFERAKQL 233


>gi|300711122|ref|YP_003736936.1| uracil-DNA glycosylase superfamily [Halalkalicoccus jeotgali B3]
 gi|299124805|gb|ADJ15144.1| uracil-DNA glycosylase superfamily [Halalkalicoccus jeotgali B3]
          Length = 209

 Score = 69.0 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 55/164 (33%), Gaps = 14/164 (8%)

Query: 85  RSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG-KTGNMLDKMLQS 142
               +C  LC             G + + +G  PS   + +G PF G + G    ++L +
Sbjct: 16  EDCTNCPDLCEARTEIAHGYGDVGAEFLFVGERPSPGADETGIPFFGDERGEAFQEILHA 75

Query: 143 IEI---------MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
           +               +++++++    P     +  E+  C P +  +I +I+P+I++ +
Sbjct: 76  LGFAGQDPGEKPELDNVYLTLLTRCRHPER-PPTEAEIGNCEPYLNAEIRMINPEIIVPV 134

Query: 194 GNKTKNFFFNNDAQKTYQNL--GKWSNLCTPHSIIPTLATVHPQ 235
           G +              +                   +  + P 
Sbjct: 135 GQRALEEIATEYTTTPAEEFDIEADHATEIRGRGFELVPMIDPA 178


>gi|167754985|ref|ZP_02427112.1| hypothetical protein CLORAM_00489 [Clostridium ramosum DSM 1402]
 gi|167705035|gb|EDS19614.1| hypothetical protein CLORAM_00489 [Clostridium ramosum DSM 1402]
          Length = 191

 Score = 69.0 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 69/201 (34%), Gaps = 26/201 (12%)

Query: 75  CSLHELKSLLRSFHDCHLCST-SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
               ELK  ++    C          +         +M I   PS + + + KPF+  +G
Sbjct: 2   KDFGELKQKIQECRYCQRQFGYEPHPVVW-GKPNAKIMQISQAPSLNVHNTLKPFNDLSG 60

Query: 134 NMLDKMLQSIE----IMRTQIHISMISPWHPPGNRNLSNIEMEIC--RPIIMRQIELISP 187
             L +    I+      +   +I+ ++  +P  +++  +     C     + ++I+++  
Sbjct: 61  KKLREKWYDIDDETFYDQNNFYIASLAHCYPGKSKSGGDRLPPKCCSEKWLRQEIDIVDN 120

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY-----P- 241
           +I + IG+      F N          +  N        P     HP  L +      P 
Sbjct: 121 QIYIIIGSYAAKKIFPNQNFVDLIFNDQVFN------GKPAYVLPHPSPLNRRWFKTYPE 174

Query: 242 -LIKKNTWHALITLKKALKNL 261
              K+        ++  +K+L
Sbjct: 175 FEAKRV-----KEIRAVIKSL 190


>gi|237735289|ref|ZP_04565770.1| uracil-DNA glycosylase [Mollicutes bacterium D7]
 gi|229381034|gb|EEO31125.1| uracil-DNA glycosylase [Coprobacillus sp. D7]
          Length = 191

 Score = 69.0 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 69/201 (34%), Gaps = 26/201 (12%)

Query: 75  CSLHELKSLLRSFHDCHLCST-SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
               ELK  ++    C          +         +M I   PS + + + KPF+  +G
Sbjct: 2   KDFGELKQKIQECRYCQRQFGYEPHPVVW-GKPNAKIMQISQAPSLNVHNTLKPFNDLSG 60

Query: 134 NMLDKMLQSIE----IMRTQIHISMISPWHPPGNRNLSNIEMEIC--RPIIMRQIELISP 187
             L +    I+      +   +I+ ++  +P  +++  +     C     + ++I+++  
Sbjct: 61  KKLREEWYDIDDETFYDQNNFYIASLAHCYPGKSKSGGDRLPPKCCSEKWLRQEIDIVDN 120

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY-----P- 241
           +I + IG+      F N          +  N        P     HP  L +      P 
Sbjct: 121 QIYIIIGSYAAKKIFPNQNFVDLIFNDQVFN------GKPAYVLPHPSPLNRRWFKTYPE 174

Query: 242 -LIKKNTWHALITLKKALKNL 261
              K+        ++  +K+L
Sbjct: 175 FEAKRV-----KEIRAVIKSL 190


>gi|307823886|ref|ZP_07654114.1| Uracil-DNA glycosylase superfamily [Methylobacter tundripaludum
           SV96]
 gi|307735180|gb|EFO06029.1| Uracil-DNA glycosylase superfamily [Methylobacter tundripaludum
           SV96]
          Length = 187

 Score = 69.0 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 54/146 (36%), Gaps = 11/146 (7%)

Query: 99  TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM----RTQIHISM 154
            + +       +++IG  P D +   GKPF+   G  + K  + I +     R +++++ 
Sbjct: 4   PVVSGSPVLSKILLIGQAPGDKEGGFGKPFAWTAGKTMFKWFERIGLDEQAFRQRVYMAA 63

Query: 155 ISPWHPPGNRN-----LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209
           +    P  N        S  E++ C   +  +++L+ P ++L +G               
Sbjct: 64  VCRCFPGKNPKGGDRVPSPAEIDNCAGWLQAEVDLLKPDLILPVGKLAIGQLMPVKRLN- 122

Query: 210 YQNLGKWSNLCTPHSIIPTLATVHPQ 235
              +GK   +         +   HP 
Sbjct: 123 -DVIGKLHPVTFHGHRTEAIPLPHPS 147


>gi|118615943|ref|YP_904275.1| glycosylase [Mycobacterium ulcerans Agy99]
 gi|118568053|gb|ABL02804.1| glycosylase [Mycobacterium ulcerans Agy99]
          Length = 251

 Score = 69.0 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 66/169 (39%), Gaps = 11/169 (6%)

Query: 79  ELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
            L + +     C     + +  +          + +IG +  +    S  PF+G +G ++
Sbjct: 21  ALDAEIAGCRRCEGMNIAPATMSAPGYGCVSSPVALIGQSLCEKCMESQVPFTGGSGELI 80

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
           D+ +Q     +  + IS     HPP NR+    E+  C P + R++E++ P++++ +G  
Sbjct: 81  DESIQRAGREKEDVFISDAVHCHPPKNRSSHQHEIVDCSPYLHRELEIVRPRLVVALGRD 140

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPH--SIIPTLATV---HPQELIQY 240
            +          + +   +   +        +P +      HP  + + 
Sbjct: 141 GERVL--TFFYPSARICEELFEIPRGRLPKGVPYI--FHVKHPSWIQRQ 185


>gi|327189381|gb|EGE56549.1| putative uracil-DNA glycosylase protein [Rhizobium etli CNPAF512]
          Length = 362

 Score = 69.0 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 68/218 (31%), Gaps = 20/218 (9%)

Query: 48  SAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC---HLCSTSLSTIC--- 101
            A  P++  R   S        +      L  L+  + +   C        +        
Sbjct: 130 PARIPVSTRRCASSGESSGGSKVMTDEARLETLRREIAACRICRDAPAKGPAHRLPHEPR 189

Query: 102 --ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMIS 156
             A  +    ++I G  P    + SG PF   +G+ L   L   ++    R +  I  + 
Sbjct: 190 PVAVISSNARILIAGQAPGLRVHESGLPFDDASGDRLRSWLGVDRASFYDRDRFAIVPMG 249

Query: 157 PWHPPGNRNLSN-IEMEICRPIIMRQIELISPKI--LLFIGNKTKNFFF--NNDAQKTYQ 211
              P  +   ++      C P   +++    P+I  +L IG   + +          T  
Sbjct: 250 FCFPGYDDKGADLPPRRECAPFWRQRVLSAMPQIELVLVIGQYAQAWHMAGGGQGGMTET 309

Query: 212 NLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248
             G W +          L   HP    +     K+N+W
Sbjct: 310 VRG-WRDSLMSGRSPAVLPLPHPSW--RNSGWLKRNSW 344


>gi|254465806|ref|ZP_05079217.1| uracil-DNA glycosylase superfamily [Rhodobacterales bacterium Y4I]
 gi|206686714|gb|EDZ47196.1| uracil-DNA glycosylase superfamily [Rhodobacterales bacterium Y4I]
          Length = 197

 Score = 69.0 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 69/200 (34%), Gaps = 27/200 (13%)

Query: 79  ELKSLLRSFHDCHLCSTSLSTICA-----TQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
           +LK+ +R+   C     + +T  A            ++I G  P    + SG+PF+  +G
Sbjct: 6   QLKAQIRNCRICAERFAATATAHAPRPVVWFRPTARILIAGQAPGARVHDSGRPFTDPSG 65

Query: 134 NMLDKML---QSIEIMRTQIHISMISPWHPPGNRN-----LSNIEMEICRPIIMRQIELI 185
           + L   L   ++    + ++ +  +    P  N          +       ++M ++  +
Sbjct: 66  DRLRAWLGLTEAEFYDKDRVAVVPMGFCFPGYNDKKADLPPPAVCSRTWHHLVMAELPDV 125

Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-K 244
             K  + +G   + +     A  T    G W +              HP    +     K
Sbjct: 126 QLK--VLVGAHAQRYHLRAKAPVTELVRG-WRDHAPQ-----VFPLPHPSW--RNTAWLK 175

Query: 245 KNTW---HALITLKKALKNL 261
           KN W     L  L+  +K L
Sbjct: 176 KNPWFEAELLPVLQARVKEL 195


>gi|15790287|ref|NP_280111.1| hypothetical protein VNG1228C [Halobacterium sp. NRC-1]
 gi|169236019|ref|YP_001689219.1| hypothetical protein OE2758R [Halobacterium salinarum R1]
 gi|10580757|gb|AAG19591.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
 gi|167727085|emb|CAP13871.1| conserved hypothetical protein [Halobacterium salinarum R1]
          Length = 210

 Score = 69.0 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 58/182 (31%), Gaps = 20/182 (10%)

Query: 85  RSFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT-GNMLDKMLQS 142
               +C  LC      +      G D + +  +PS +   +G P  G   G     +L S
Sbjct: 16  EDCRNCAGLCDQRERVVHGYGDVGADFVFVAESPSAASEAAGVPLVGDDAGERFQHILGS 75

Query: 143 IEIMRT----------QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192
           + +  +            +++++S    P        E   C P +   I +I+P++L+ 
Sbjct: 76  VGLNHSLPSSTEPELANAYVTLLSRCRHPDREAT-ADERTRCEPYLNADIRMINPEVLVP 134

Query: 193 IGNKTKNFFFNNDAQKTYQNL--GKWSNLCTPHSIIPTLATVHPQELIQ-YPLIKKNTWH 249
           +G +               +L   +             +  +HP    +     + + W 
Sbjct: 135 VGQRALTELGKEYTTTPADSLAVTELHGDTVRGRGFELVPMIHP----REQSDAQTDAWI 190

Query: 250 AL 251
             
Sbjct: 191 DF 192


>gi|307327193|ref|ZP_07606381.1| Uracil-DNA glycosylase superfamily [Streptomyces violaceusniger Tu
           4113]
 gi|306887084|gb|EFN18082.1| Uracil-DNA glycosylase superfamily [Streptomyces violaceusniger Tu
           4113]
          Length = 258

 Score = 68.6 bits (166), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 57/221 (25%), Gaps = 46/221 (20%)

Query: 58  HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHL------------------CSTSLST 99
              +         A  A +L EL   L     C                           
Sbjct: 2   TTSASAPSYPAQSAPGAETLAELDERLIDCRACPRLVGWREETARTKRRAYADWDYWGRP 61

Query: 100 ICATQTEGQDLMIIGYTPSDS-DNISGKPFSGKT-GNMLDKMLQS-------------IE 144
           +         + I+G  P+    N +G+ F+G   G+ L   L                 
Sbjct: 62  VPGFGPPDASVAIVGLAPAAHGGNRTGRMFTGDRAGDFLYSALYDLGLANRRTATHRGDG 121

Query: 145 IMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFF 202
           +    + I+      PP     +  E + CRP + R++ L+ P  +  + +G        
Sbjct: 122 LELRGVRITSPVHCAPP-ANRPTPGERDTCRPWLARELRLLRPTVRSAVVLGAFGWQAVL 180

Query: 203 --------NNDAQKTYQNLGKWSNLCTPHSIIP--TLATVH 233
                   +    +     G  S L       P       H
Sbjct: 181 PALEAAGWSVPRPRPVFGHGARSTLRAADGGAPLTLFGCYH 221


>gi|289208766|ref|YP_003460832.1| uracil-DNA glycosylase superfamily [Thioalkalivibrio sp. K90mix]
 gi|288944397|gb|ADC72096.1| Uracil-DNA glycosylase superfamily [Thioalkalivibrio sp. K90mix]
          Length = 212

 Score = 68.6 bits (166), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 22/175 (12%), Positives = 49/175 (28%), Gaps = 29/175 (16%)

Query: 86  SFHDCHLCST------SLST------ICATQTEGQDLMIIGYTPSDSDNI-SGKPFSGKT 132
               C   +       +         + +       L+I+G  P       +G+PF+G  
Sbjct: 12  HCRRCPRLAGFLDDVRAKHPDYHAAPVASFGPLDARLLIVGLAPGMHGANATGRPFTGDY 71

Query: 133 -GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPII 178
            G +L + L                        I+      PP N   +  E+  C   +
Sbjct: 72  AGVLLYETLHQYGFATAPESVSADDGLQLLDCRITNAVKCLPPQN-KPTTEEIRTCNGFL 130

Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
             +++ + P+++L +G    +                          +  + + H
Sbjct: 131 ASEMDAMQPRVILALGKIAHDAVLRARGLPLSSLRFA-HGAEHALDGMRLIDSYH 184


>gi|257462673|ref|ZP_05627082.1| DNA polymerase [Fusobacterium sp. D12]
 gi|317060321|ref|ZP_07924806.1| DNA polymerase [Fusobacterium sp. D12]
 gi|313685997|gb|EFS22832.1| DNA polymerase [Fusobacterium sp. D12]
          Length = 191

 Score = 68.6 bits (166), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 68/185 (36%), Gaps = 12/185 (6%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             +LK    +  +  L    L  +        D++I+G  P    N + K   G +G  L
Sbjct: 8   WEDLKYGASNIGNTILKPHQLEVLIGGGNPDADILILGDDPELYLNENLKTQKGSSGEFL 67

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
             +L+   I +  I++S ++       ++    + E  + +++ QI L++PK+++ +G +
Sbjct: 68  YLLLEFCGIQKEDIYVSTLTK-RNARLKDYMPEDYEKLKELLICQIGLLAPKVIVCLGYE 126

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL--IQYPLIKK-----NTWH 249
                         +   +  +       I  L T     +   +  L KK        +
Sbjct: 127 AAQMLL-EKEIVLEEARQEVFSWKA---GIQVLVTYDVNTVKKARAELGKKAKLALEFRN 182

Query: 250 ALITL 254
            L  L
Sbjct: 183 DLKKL 187


>gi|55377052|ref|YP_134902.1| uracil DNA glycosylase superfamily protein [Haloarcula marismortui
           ATCC 43049]
 gi|55229777|gb|AAV45196.1| uracil DNA glycosylase superfamily protein [Haloarcula marismortui
           ATCC 43049]
          Length = 208

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 60/163 (36%), Gaps = 13/163 (7%)

Query: 85  RSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143
               +C  LC T  + +      G + +++G +P+   + SG PF+G+    L  +L ++
Sbjct: 16  EECQNCPALCETRENVVHGYGDVGAEFIVLGDSPAVGADESGLPFTGENERELLDILAAV 75

Query: 144 EIM---------RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
           ++               ++ ++    P      + E+  C P +  +I +I+P+ILL +G
Sbjct: 76  DMCSDPDADRPQLQNTFLTYVTRCRHPDREAT-DEEVVNCEPYLNSEIRMINPEILLPVG 134

Query: 195 NKTKNFFFNNDAQKTYQNL--GKWSNLCTPHSIIPTLATVHPQ 235
            +            +   L                 L  + P 
Sbjct: 135 QRPLEELAFEYTTMSEDELDIEDRHATTIRGRGFEILPMIPPS 177


>gi|282860587|ref|ZP_06269653.1| Uracil-DNA glycosylase superfamily [Streptomyces sp. ACTE]
 gi|282564323|gb|EFB69859.1| Uracil-DNA glycosylase superfamily [Streptomyces sp. ACTE]
          Length = 268

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 31/232 (13%), Positives = 62/232 (26%), Gaps = 51/232 (21%)

Query: 49  AIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHL---------------- 92
           A  P         P  + + S       L EL   +     C                  
Sbjct: 6   AADPAPGAEDPGFPAYRASRSTG-----LAELDRRVAGCRACPRLVAWREEVAEVKRAAF 60

Query: 93  --CSTSLSTICATQTEGQDLMIIGYTPSDS-DNISGKPFSGK-TGNMLDKMLQSIEIMRT 148
                    +         + ++G  P+    N +G+ F+G  TG+ L   L ++ +   
Sbjct: 61  QEWDYWGRPVPGFGPPDATVAVVGLAPAAHGGNRTGRMFTGDATGDFLFAALHAVGLASQ 120

Query: 149 QIHI-------------SMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFI 193
              +             +      PP     + +E + CRP +  +++L+SP  + ++ +
Sbjct: 121 PTSVDAGDGLTLRGVRLTSPVHCAPP-ANRPTPLERDNCRPWLAAELDLLSPGLRAVVVL 179

Query: 194 GNKTKNFF----------FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
           G                                         +  L + HP 
Sbjct: 180 GGFGWQALLPVLAEAGWRLPRPRPAFGHGAHVVLPATEHRQELHLLGSYHPS 231


>gi|226365411|ref|YP_002783194.1| uracil-DNA glycosylase [Rhodococcus opacus B4]
 gi|226243901|dbj|BAH54249.1| putative uracil-DNA glycosylase [Rhodococcus opacus B4]
          Length = 237

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 26/207 (12%), Positives = 56/207 (27%), Gaps = 44/207 (21%)

Query: 70  IAQKACSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLM 111
           +      +  L + L     C                           +         L+
Sbjct: 1   MGAALTDIAGLDAQLIECRACPRLVEWREQVAREKRASFRDETYWGRPVPGFGPADAPLL 60

Query: 112 IIGYTPSDSD-NISGKPFSG-KTGNMLDKMLQS-------------IEIMRTQIHISMIS 156
           I+G  P+    N +G+ F+G ++G+ L   L +               +    + I+   
Sbjct: 61  IVGLAPAAHGANRTGRMFTGDRSGDFLYAALHAVGLASQPTATHIGDGLELFGVRITSPV 120

Query: 157 PWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFF--------NNDA 206
              PP     +  E + CR  +  ++ ++ P  + ++ +G                    
Sbjct: 121 HCAPP-ANKPTPEERDNCRRWLDAELRILQPGLRSVIVLGGFGWQSLLPVLDDAGWAVPR 179

Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVH 233
            +     G    L  P   +      H
Sbjct: 180 PRPKFGHGAHVELAGPERPLHLFGCYH 206


>gi|254512079|ref|ZP_05124146.1| uracil-DNA glycosylase superfamily protein [Rhodobacteraceae
           bacterium KLH11]
 gi|221535790|gb|EEE38778.1| uracil-DNA glycosylase superfamily protein [Rhodobacteraceae
           bacterium KLH11]
          Length = 195

 Score = 68.2 bits (165), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 61/201 (30%), Gaps = 30/201 (14%)

Query: 81  KSLLRSFHDCHLCSTS---------LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
           +SL+     C LC+              +      G  ++I G  P    + SG+PF+  
Sbjct: 2   ESLISEIEACRLCADRFAQTATAHTPRPVVWF-RPGARILIAGQAPGARVHASGRPFTDP 60

Query: 132 TGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRN----LSNIEMEICRPIIMRQIEL 184
           +G+ L   L   +     R  + I  ++   P  N                   +     
Sbjct: 61  SGDRLRDWLGLDEGAFYDRAHVAIVPMAFCFPGYNARKADLPPPPICGRTWHDRVMAALG 120

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI- 243
             P + + +G     +        T     +W +           A  HP    +     
Sbjct: 121 DMP-LTVLVGGHAHKYHLGAKTPVTEAVR-RWRDHAP-----RVFALPHPSW--RNTAWL 171

Query: 244 KKNTW--HALI-TLKKALKNL 261
           KKN W    L+  L+  ++ +
Sbjct: 172 KKNPWFEADLLPVLRARVQEV 192


>gi|317126569|ref|YP_004100681.1| uracil-DNA glycosylase [Intrasporangium calvum DSM 43043]
 gi|315590657|gb|ADU49954.1| Uracil-DNA glycosylase superfamily [Intrasporangium calvum DSM
           43043]
          Length = 280

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/242 (12%), Positives = 60/242 (24%), Gaps = 49/242 (20%)

Query: 40  QRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLST 99
                                +    +   +   A +  EL + +     C        +
Sbjct: 17  PSPVPPGTGWPGDPATGATPVAATAAEVRRLGAAALTPAELDARVSVCRACPRLVAWRES 76

Query: 100 I-------------------CATQTEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDK 138
           +                    +       ++I+G  P+ +  N +G+ F+G ++G+ L  
Sbjct: 77  VATRGRRASFADQPYWGRPGPSFGDPAASVLIVGLAPAANGTNRTGRMFTGDRSGDWLYA 136

Query: 139 MLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR--QIE 183
            L                    T I I       PP     S  E   C   + R  ++ 
Sbjct: 137 ALHRAGYASQPTSVAAGDGLELTGIRIVATVRCAPP-ANRPSTEEKATCSGWLARDLELT 195

Query: 184 LISP---KILLFIGNKTKNFFFN-NDAQKTYQNLGKWSN--------LCTPHSIIPTLAT 231
              P   + LL +G+   +                K                + +  L +
Sbjct: 196 SAGPGGLRTLLALGSIGWDGVLGAARRLGWQVPRPKPRFGHGAEAALALPDGTDVRLLGS 255

Query: 232 VH 233
            H
Sbjct: 256 YH 257


>gi|148508232|gb|ABQ76019.1| conserved hypothetical protein [uncultured haloarchaeon]
          Length = 242

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 55/160 (34%), Gaps = 15/160 (9%)

Query: 86  SFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT-GNMLDKMLQSI 143
              +C  LC T  + +      G D + +   P    + +G PF+G   G  L  +L  +
Sbjct: 48  ECENCPGLCETRENVLHGYGDVGGDFIFVAERPHAGADQTGVPFTGDDAGRQLQAILGQL 107

Query: 144 EIMRTQI----------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
              RT             ++ ++    P      + E+  C P +  +I +I+P+I++ I
Sbjct: 108 GFARTPPDADEPDIQNAFLTYVTRCRHPDRTAT-DEEIRACEPYLNAEIRMINPEIIIPI 166

Query: 194 GNKTKNFFFNNDAQKTYQNL--GKWSNLCTPHSIIPTLAT 231
           G  T      +   +   +    +             +  
Sbjct: 167 GETTLRELAIDYTTRRPDSFDIAEEHATTIRGRGFELVPM 206


>gi|94968592|ref|YP_590640.1| uracil-DNA glycosylase superfamily protein [Candidatus Koribacter
           versatilis Ellin345]
 gi|94550642|gb|ABF40566.1| Uracil-DNA glycosylase superfamily [Candidatus Koribacter
           versatilis Ellin345]
          Length = 228

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 61/199 (30%), Gaps = 42/199 (21%)

Query: 77  LHELKSLLRSFHDCH-LCSTSLS-----------------TICATQTEGQDLMIIGYTPS 118
           L  L   +     C  L                        +     E   ++I+G  P 
Sbjct: 5   LSVLNHEVIGCRLCPRLVEYREQIGVEKRKAYREQEYWAKPVAGFGDEKARVLILGLAPG 64

Query: 119 DSD-NISGKPFSGKT-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGN 163
               N +G+PF+G   G+ +  +L                       +I+      PP N
Sbjct: 65  AHGSNRTGRPFTGDKSGDFMYPILHKTGFASQPTAVNREDGLKLLDCYITAAVRCAPPDN 124

Query: 164 RNLSNIEMEICRPIIMRQIELISP-KILLFIGNKTKNFFFNNDAQKTYQNL------GKW 216
                 E+  C P + R+I  +   K+++ +G    + +  +  +  +         G  
Sbjct: 125 -KPLPQEIANCAPYLDREIAALDAVKVVVALGKIGFDAYLAHLQRAGFSFRKAEYGFGHL 183

Query: 217 SNLCTPHSIIPTLATVHPQ 235
           +    P+  I  L + HP 
Sbjct: 184 AEYKMPN-GIVLLGSYHPS 201


>gi|83644737|ref|YP_433172.1| Uracil-DNA glycosylase [Hahella chejuensis KCTC 2396]
 gi|83632780|gb|ABC28747.1| Uracil-DNA glycosylase [Hahella chejuensis KCTC 2396]
          Length = 221

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 60/165 (36%), Gaps = 13/165 (7%)

Query: 78  HELKSLLRSFHDCHLCST--SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           +EL  LL+    C LC      + I    +    LMIIG  P    + +G P++  +G+ 
Sbjct: 28  NELSRLLQDVRACRLCEQHLEPNPIVKAGST-ARLMIIGQAPGTRVHATGIPWNDPSGDR 86

Query: 136 LDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK--IL 190
           L   L   +       +I I  +   +P   R+      + C      +I    P+  + 
Sbjct: 87  LRAWLGLDKETFYDTRRIAIMPMGFCYPGKGRSGDLPPRKECYEHWHHKILARLPRLEVF 146

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
           L +G   +  +  N  +   +N+  W +          +   HP 
Sbjct: 147 LLVGLYAQQAYLPNAYKSLSENVKHWRDWYP-----RLIPLPHPS 186


>gi|119383981|ref|YP_915037.1| uracil-DNA glycosylase superfamily protein [Paracoccus
           denitrificans PD1222]
 gi|119373748|gb|ABL69341.1| Uracil-DNA glycosylase superfamily [Paracoccus denitrificans
           PD1222]
          Length = 220

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 66/200 (33%), Gaps = 28/200 (14%)

Query: 80  LKSLLRSFHDCHLCSTSLST-----ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L   + +   C     S +T       A    G  ++++G  P    +++G+PF+ ++GN
Sbjct: 22  LLREISACRLCEQRFASTATGHSPRPVAWFRPGARILVVGQAPGMRVHLAGRPFADRSGN 81

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRN--LSNIEMEICRPIIMRQIELISPKI 189
            L   +    +    R++I I  ++   P  +             R    R +  + P++
Sbjct: 82  RLRDWMGVSDAEFYDRSRIAIVPMAFCFPGYDAKGADLPPPPICARTWRERVMAELQPQL 141

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS--IIPTLATVHPQ-----ELIQYPL 242
            L +G   + +             G  +                 HP       L + P 
Sbjct: 142 TLLVGGHAQRWHLG------AAARGGVTQTVADWRAHGPHIFPLPHPSWRNTGWLRRNPW 195

Query: 243 IKKNTWHALI-TLKKALKNL 261
            +      L+  L+ A+  L
Sbjct: 196 FQA----DLLPELRAAVAAL 211


>gi|320450380|ref|YP_004202476.1| uracil-DNA glycosylase [Thermus scotoductus SA-01]
 gi|320150549|gb|ADW21927.1| uracil-DNA glycosylase [Thermus scotoductus SA-01]
          Length = 223

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 60/219 (27%), Gaps = 36/219 (16%)

Query: 76  SLHELKSLLRSFHDCHL------------------CSTSLSTICATQTEGQDLMIIGYTP 117
           S    K  L +   C                     +     +         L++ G  P
Sbjct: 5   SWDAFKQELTACTRCPRLVAHREEVGRKKRRAFQDWTYWARPVPGFGDPQARLVLFGLAP 64

Query: 118 SDSD-NISGKPFSGK-TGNMLDKMLQSIE------------IMRTQIHISMISPWHPPGN 163
                N +G+PF+G  +G  L  +L                +     +++      PP N
Sbjct: 65  GAHGSNRTGRPFTGDASGAFLYPLLYQAGLSSNPESEPHDDLRLYGTYLTAAVRCAPPEN 124

Query: 164 RNLSNIEMEICRPIIMRQIELIS-PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP 222
              +  E+  C      ++ L+   ++ L +G        ++   K   +          
Sbjct: 125 -KPTREELLACSAWTRVELGLLREARVYLALGRIALEALLDHFGMKKSAHPFFHGAHYLL 183

Query: 223 HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
                 LA+ H     Q     + T    + +    K L
Sbjct: 184 PDGRHLLASYHVS--RQNTQTGRLTREMFLEILLKAKGL 220


>gi|326773091|ref|ZP_08232375.1| uracil-DNA glycosylase family protein [Actinomyces viscosus C505]
 gi|326637723|gb|EGE38625.1| uracil-DNA glycosylase family protein [Actinomyces viscosus C505]
          Length = 278

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/266 (12%), Positives = 69/266 (25%), Gaps = 50/266 (18%)

Query: 42  KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL---- 97
                              +        +A  +  L  L + +     C           
Sbjct: 15  PVPPGTGWPDDPATAATPVACSAADVARLAGASSDLSALDARITVCRACDRLVAWREEVA 74

Query: 98  ---------------STICATQTEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKML 140
                            + +  +E   + ++G  P+ +  N +G+ F+G ++G+ L    
Sbjct: 75  RTGRRASFAHEPYWGRPVASVGSEDARIYVVGLAPAANGANRTGRMFTGDRSGDWLWAAF 134

Query: 141 QS-------------IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE-LIS 186
                               T   +       PP     + +E   C P + R+I  +  
Sbjct: 135 HRAGLAASPTSTAAGDGQRLTGARMGAAVRCAPP-ANKPTTVERATCAPWLAREIALMPE 193

Query: 187 PKILLFIGNKTKNFFFNND--------AQKTYQNLGKWSNL-CTPHSIIPTLATVHPQEL 237
            K+LL +G                     +     G  + L       +  L + HP + 
Sbjct: 194 VKVLLALGGIGWGAVLRVTREAGWILPRPQPRFGHGATAELTRPDGRAVTLLGSYHPSQ- 252

Query: 238 IQYPLIKKNTW---HALITLKKALKN 260
            Q     + T      ++   K L  
Sbjct: 253 -QNTFTGRLTEAMLDDVLEAAKRLAE 277


>gi|294628764|ref|ZP_06707324.1| uracil-DNA glycosylase, family 4 [Streptomyces sp. e14]
 gi|292832097|gb|EFF90446.1| uracil-DNA glycosylase, family 4 [Streptomyces sp. e14]
          Length = 257

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 69/231 (29%), Gaps = 42/231 (18%)

Query: 63  LVQQADSIAQKACSLHELKSLLRSFHDCHL------------------CSTSLSTICATQ 104
            + +  ++   + SL  L   +     C                     +     +    
Sbjct: 19  AMGRGRAMDTDSGSLAALDGRISECRACPRLVEWREEVARTKRAAFADWTYWGRPVPGFG 78

Query: 105 TEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKML-------------QSIEIMRTQ 149
                L+I+G  P+    N +G+ F+G ++G++L + L                 +    
Sbjct: 79  PPDARLLIVGLAPAAHGANRTGRMFTGDRSGDVLYRALYDLGLASQPTAVSADDGLELHG 138

Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQ 207
           + I+      PP     +  E + CR  +++++ L+ P  + ++ +G           A 
Sbjct: 139 VRITSPVHCAPP-ANKPTPGERDTCRSWLVQELHLLRPTLRSVVVLGAFGWQAALPAFAA 197

Query: 208 K-TYQNLGKW---SNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
                   +         P   I      H  +  +     + T   L  +
Sbjct: 198 AGWTVPRPRPAFAHGARVPLDGIDLFGCFHVSQ--RNTFTGRLTAEMLREV 246


>gi|227822274|ref|YP_002826245.1| uracil-DNA glycosylase [Sinorhizobium fredii NGR234]
 gi|227341274|gb|ACP25492.1| uracil-DNA glycosylase [Sinorhizobium fredii NGR234]
          Length = 319

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 68/199 (34%), Gaps = 18/199 (9%)

Query: 66  QADSIAQKACSLHELKSLLRSFHDCHLCSTS--LSTICATQTE------GQDLMIIGYTP 117
           +  S+      L EL++ + +   C           +               ++I G  P
Sbjct: 105 RRSSVPSADERLWELRAAIAACRLCRDDPARGETHRLPHEPRPVAVLSATARILIAGQAP 164

Query: 118 SDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSN-IEMEI 173
               + SG PF+  +G+ L + L   +          I  +    P  +R+ S+      
Sbjct: 165 GLRVHESGLPFNDASGDRLRQWLAVDRDTFYDPRNFAIVPMGFCFPGYDRHGSDLPPRAE 224

Query: 174 CRPIIMRQIELISPKI--LLFIGNKTKNFFFNND-AQKTYQNLGKWSNLCTPHSIIPTLA 230
           C P+  R++  + P+I   L +G+  + +    D  +     +  W      ++    L 
Sbjct: 225 CAPLWRRRVIDVMPQIELTLAVGHYAQRWHIGADCPKSMTDTVRNWERYVKRNTGPAVLP 284

Query: 231 TVHPQELIQYPLI-KKNTW 248
             HP    +     +KN W
Sbjct: 285 MPHPSW--RNTGWLRKNPW 301


>gi|312139006|ref|YP_004006342.1| uracil DNA glycosylase [Rhodococcus equi 103S]
 gi|311888345|emb|CBH47657.1| uracil DNA glycosylase [Rhodococcus equi 103S]
          Length = 293

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/240 (11%), Positives = 63/240 (26%), Gaps = 45/240 (18%)

Query: 40  QRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL-- 97
                          + +   +       ++A  A +L ++ + +     C         
Sbjct: 19  PSPVPPGTGWPGDPADEQTPVAHSAADVVALAADAKNLLDIDARISVCRACPRLVEWRER 78

Query: 98  ----------------STICATQTEGQDLMIIGYTPSDS-DNISGKPFSGK-TGNMLDKM 139
                             +     +   L+IIG  P+ +  N +G+ F+G   G+ L + 
Sbjct: 79  AAETKRASFANQPYWGRPVTGFGGDFAKLLIIGLAPAANGGNRTGRMFTGDQAGDWLFRA 138

Query: 140 LQS-------------IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186
           L                      + +       PP N   S  E + C   +  +   + 
Sbjct: 139 LHRAGLATRAEVDHAGDGQKLFGVRMLSAVRCAPPEN-KPSIEERDCCAGWLDAEFARLL 197

Query: 187 P--KILLFIGNKTKNFFFN--------NDAQKTYQNLGKWSN-LCTPHSIIPTLATVHPQ 235
           P  + ++ +G    +                K     G+ +         +  +   HP 
Sbjct: 198 PFARAVVALGAFGWDATLGAVRRSGGTVPTPKPKFGHGQIAVLHTADGKPLNVIGCYHPS 257


>gi|108797007|ref|YP_637204.1| uracil-DNA glycosylase superfamily protein [Mycobacterium sp. MCS]
 gi|119866091|ref|YP_936043.1| uracil-DNA glycosylase superfamily protein [Mycobacterium sp. KMS]
 gi|108767426|gb|ABG06148.1| Uracil-DNA glycosylase superfamily [Mycobacterium sp. MCS]
 gi|119692180|gb|ABL89253.1| Uracil-DNA glycosylase superfamily [Mycobacterium sp. KMS]
          Length = 222

 Score = 67.5 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 65/164 (39%), Gaps = 4/164 (2%)

Query: 80  LKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
           L   +RS   C                     ++I+G +  +      +PF   +G++L+
Sbjct: 18  LDDEIRSCSRCAGMNEEGVTQAAPGWGNLYSPVVIVGQSLCEQCMKPQEPFFEGSGSLLN 77

Query: 138 KMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197
           + L+     + +  IS +   HPP NR     E+  C   + R++EL+ P++++ +G   
Sbjct: 78  EGLRLAGRAKGETFISNVVHCHPPKNRGSREHEIVNCSSYLHRELELVRPRLVIALGVDA 137

Query: 198 KNFF-FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
           K    F   + +      + S+   P S     A  HP  + + 
Sbjct: 138 KRVLSFFYPSARVSPWPFRASSGRQPRSPYLLFAK-HPAWIKRQ 180


>gi|114562086|ref|YP_749599.1| uracil-DNA glycosylase superfamily protein [Shewanella
           frigidimarina NCIMB 400]
 gi|114333379|gb|ABI70761.1| Uracil-DNA glycosylase superfamily [Shewanella frigidimarina NCIMB
           400]
          Length = 206

 Score = 67.5 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 73/207 (35%), Gaps = 28/207 (13%)

Query: 73  KACSLHELKSLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
           KA  +  L + +++   C  C    +  +         ++IIG  P    ++SG PF   
Sbjct: 8   KALDMVSLLTQVKNCQLCASCLVDGVRPVV-QIDPQAKVLIIGQAPGRKVHLSGIPFDDA 66

Query: 132 TGNMLDKML---QSIEIMRTQIHISMISPWHP----------PGNRNLSNIEMEICRPII 178
           +G+ L   L   + +     QI I  +   +P           G+             ++
Sbjct: 67  SGDRLRLWLGVTKDVFYDAKQIAIMPMGFCYPGSYAASGKGKSGDLPPRPECAPKWHDLL 126

Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ--- 235
           ++Q+   + K++L +G   + ++  +  +   + + +W            +   HP    
Sbjct: 127 LQQLV--NVKLILLVGQYAQQYYLADKPKTLTETVQQWRRF-----GPRYIPLPHPSPRN 179

Query: 236 --ELIQYPLIKKNTWHAL-ITLKKALK 259
              L + P  +      + + +  AL 
Sbjct: 180 NIWLSRNPWFEDELLSDISLRVANALA 206


>gi|149928378|ref|ZP_01916618.1| Uracil-DNA glycosylase superfamily protein [Limnobacter sp. MED105]
 gi|149822913|gb|EDM82159.1| Uracil-DNA glycosylase superfamily protein [Limnobacter sp. MED105]
          Length = 225

 Score = 67.5 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 52/176 (29%), Gaps = 31/176 (17%)

Query: 86  SFHDCHLC-----STSLS-------TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK- 131
              DC                     +     E  +L+I+G  P     N SG+PF+G  
Sbjct: 24  HCTDCPRLHAFHEQNRQKFPAHFNGPVPPFGPENAELLIVGLAPGLHGANRSGRPFTGDY 83

Query: 132 TGNMLDKMLQSIEIMRTQIHIS-------------MISPWHPPGNRNLSNIEMEICRPII 178
            G++L   L         + I+                   PP N   +  E++ C   I
Sbjct: 84  CGDLLYSTLHKFGFANRPVSIAVGDGMQLLNARVSNAVKCVPPEN-KPTPAEIKTCNQFI 142

Query: 179 MRQIELISPKILLFIGNKTKNFFFN-NDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
             + ++  PK +L +G           D +++    G                + H
Sbjct: 143 AHEFKVHPPKAVLALGLVGHQAVLKAMDQKQSAFKFG--HAAQHDLGAFRLFDSYH 196


>gi|284163386|ref|YP_003401665.1| uracil-DNA glycosylase superfamily [Haloterrigena turkmenica DSM
           5511]
 gi|284013041|gb|ADB58992.1| Uracil-DNA glycosylase superfamily [Haloterrigena turkmenica DSM
           5511]
          Length = 226

 Score = 67.5 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 68/230 (29%), Gaps = 41/230 (17%)

Query: 59  IHSPLVQQADSIAQKACSLHELKSLLRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTP 117
             SP    AD       ++ E          C  L          T      ++++G  P
Sbjct: 5   SPSPSDTNADPAYPTERNVIEP-----GCERCPALAEHRECISWGTGPLEASVLVVGEAP 59

Query: 118 S----DSDNISGKPFSGK------TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRN-- 165
                D+D   G  ++GK      +G  + +ML+ +       + +      P    +  
Sbjct: 60  GPGNPDADRWKGGNWTGKAYTSRHSGRRIRRMLERVGYG-DDAYYTNAVKCFPADPADPT 118

Query: 166 ----LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN-LC 220
                +  E   CR  ++ +IE + P ++L  G          +       +      + 
Sbjct: 119 SNREPTPEERTNCRGHLLTEIETVDPDVVLATGKHATTSVLAAEDHTLEGFIDAVLEPVD 178

Query: 221 TPHSIIPTLATVHPQELIQYPLIKKNTW---------HALITLKKALKNL 261
                   L  +HP          ++ W           L  + +AL+ L
Sbjct: 179 CERLETTLLPILHPSY--------QDVWIGRLGYEPDEYLAAIGEALEEL 220


>gi|167566785|ref|ZP_02359701.1| uracil-DNA glycosylase [Burkholderia oklahomensis EO147]
          Length = 224

 Score = 67.1 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 73/217 (33%), Gaps = 21/217 (9%)

Query: 57  RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIG 114
           R+   P+   A +   +  SL  L   +R+   C  HL       + A       ++I+G
Sbjct: 5   RNDSPPIRAAARTTPTRRASLDALLREIRACTVCAPHLPCGPRPVVRA--HPHARILIVG 62

Query: 115 YTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEM 171
             P    + SG P+   +G  L + L    +     +   I  +   +P    +  N   
Sbjct: 63  QAPGARVHASGIPWDDASGKRLREWLNVDDAKFYDESLFAIVPMGFCYPGRGASGDNPPR 122

Query: 172 EICRPIIMRQIELISP--KILLFIGNKTKNFFFN-NDAQKTYQNLGKWSNLCTPHSIIPT 228
             C P+ + ++    P  ++ L IG   +  F          + +  W+           
Sbjct: 123 PECAPLWLDRLLSELPDIRLTLLIGQYAQRRFLGARRKPSVTETVRAWAEYAPEF----- 177

Query: 229 LATVHPQELIQYPLI-KKNTWHA---LITLKKALKNL 261
           +   HP    +     K++ W     L  L+  +  L
Sbjct: 178 IPLPHPSP--RNQGWLKRHPWFDADVLPALRGNVAEL 212


>gi|313126025|ref|YP_004036295.1| uracil-DNA glycosylase [Halogeometricum borinquense DSM 11551]
 gi|312292390|gb|ADQ66850.1| uracil-DNA glycosylase [Halogeometricum borinquense DSM 11551]
          Length = 211

 Score = 67.1 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 57/161 (35%), Gaps = 15/161 (9%)

Query: 86  SFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT-GNMLDKMLQSI 143
              +C  LC    + +      G + + IG  P    + +G PF+G   G  L ++L  +
Sbjct: 17  DCENCSGLCDVRENVVHGYGDVGGEFLFIGEQPRGGADETGVPFTGDPAGERLQRILGDL 76

Query: 144 EIMR----------TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
              R            + ++ ++    P        E+  C P +  ++ +I+P+IL+ I
Sbjct: 77  GFSRSRPDSDEPDLQNVFLTYLTRCRHPER-RPDEEEILTCEPYLNAEVRMINPEILVPI 135

Query: 194 GNKTKNFFFNNDAQKTYQNL--GKWSNLCTPHSIIPTLATV 232
           G +T      +   +   +    +             +  +
Sbjct: 136 GQRTLESLAIDYTTRAPDSFDIEEAHATTIRGRGFELVPML 176


>gi|121606732|ref|YP_984061.1| phage SPO1 DNA polymerase-like protein [Polaromonas
           naphthalenivorans CJ2]
 gi|120595701|gb|ABM39140.1| phage SPO1 DNA polymerase-related protein [Polaromonas
           naphthalenivorans CJ2]
          Length = 266

 Score = 67.1 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 48/149 (32%), Gaps = 12/149 (8%)

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL 166
           G   +++  +P     +    F G  G +LD ML++  + R    +              
Sbjct: 123 GARWLVLAQSPPA--ALQAPVFEGDAGRLLDNMLRAARLDRDAGAVLFAPLVRQ-----A 175

Query: 167 SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII 226
            +  M+     ++  +E   P ++L +G         +      +  GK           
Sbjct: 176 VSGAMDELAAALLALVEQARPDVVLVMGRLAAQALLQS-----SEPFGKLRGRPHALHGR 230

Query: 227 PTLATVHPQELIQYPLIKKNTWHALITLK 255
           PT+ T     L++ P  K   W  L    
Sbjct: 231 PTVVTHDAPYLLRCPQDKAKAWDDLCLAM 259


>gi|149919098|ref|ZP_01907582.1| Uracil-DNA glycosylase superfamily protein [Plesiocystis pacifica
           SIR-1]
 gi|149820028|gb|EDM79449.1| Uracil-DNA glycosylase superfamily protein [Plesiocystis pacifica
           SIR-1]
          Length = 231

 Score = 67.1 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 70/228 (30%), Gaps = 42/228 (18%)

Query: 73  KACSLHELKSLLRSFHDCHLCSTSLS--------------------TICATQTEGQDLMI 112
           ++ SL  L+  L     C                             +         ++I
Sbjct: 4   RSKSLVTLERKLIRCRACERLVDWREEVAEVKRAAYRDEDYWGRPVPVPGFGDPRARVLI 63

Query: 113 IGYTPSDSD-NISGKPFSG-KTGNMLDKMLQSIEIMRTQI-------------HISMISP 157
           +G  P+    N +G+ F+G ++G+ L + +                        ++ +  
Sbjct: 64  VGLAPAAHGANRTGRMFTGDRSGDWLYRAMHETGFANQASSVARGDGLALTGAFVTSVVK 123

Query: 158 WHPPGNRNLSNIEMEICRPIIMRQIELISP-KILLFIGNKTKNFFFNNDAQKTYQNLGKW 216
             PP     +  E + C P    ++ L+   ++L+ +G    +      A K ++   K 
Sbjct: 124 CAPP-ANKPTTAERDACMPWAHEELRLLDAVRVLVALGGFGWDGALRLLAAKGHRVKPKP 182

Query: 217 ---SNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
                          L + HP +  Q    K+ T   +  + +  + L
Sbjct: 183 KFGHGAEAQVGPYVLLGSYHPSQ--QNTFTKRLTRPMIRGVFERAREL 228


>gi|312602362|ref|YP_004022207.1| uracil DNA glycosylase superfamily protein [Burkholderia
           rhizoxinica HKI 454]
 gi|312169676|emb|CBW76688.1| Uracil DNA glycosylase superfamily protein [Burkholderia
           rhizoxinica HKI 454]
          Length = 206

 Score = 67.1 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 75/199 (37%), Gaps = 21/199 (10%)

Query: 75  CSLHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
            SL  L   +R+   C   L + +   + A  +    L+I+G  P    + SG P+S  +
Sbjct: 11  ASLDTLLRDVRACRVCDTQLPAGARPVVRA--SRDARLLIVGQAPGAKVHASGVPWSDAS 68

Query: 133 GNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189
           G  L   L   ++     +++ I  +   +P    +  N     C  + + Q+    P++
Sbjct: 69  GKRLRDWLDMTEAEFYDTSRVAIIPMGFCYPGRGASGDNPPRPECAQLWLEQLLSHLPRV 128

Query: 190 --LLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KK 245
              L +G   +  F     + +  + +  W+     +     +   HP    +  L  K+
Sbjct: 129 ELTLLVGQYAQRHFLGARRKSSLTETVRAWAEYTPTY-----VPLPHPSP--RNQLWFKR 181

Query: 246 NTW---HALITLKKALKNL 261
           + W     L  LK+ +  L
Sbjct: 182 HPWFGDQVLPMLKQRIAAL 200


>gi|256374831|ref|YP_003098491.1| uracil-DNA glycosylase [Actinosynnema mirum DSM 43827]
 gi|255919134|gb|ACU34645.1| Uracil-DNA glycosylase superfamily [Actinosynnema mirum DSM 43827]
          Length = 276

 Score = 66.7 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 56/206 (27%), Gaps = 45/206 (21%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLMII 113
                L EL   +     C                           +         L ++
Sbjct: 43  AAVPDLPELDRRVSGCRACPRLVAWREEVARVKRAAFRDQDYWGRPVPGFGGGDARLAVV 102

Query: 114 GYTPSDS-DNISGKPFSGK-TGNMLDKMLQSIEIMRTQI-------------HISMISPW 158
           G  P+    N +G+ F+G  +G +L   + ++ +                   I+     
Sbjct: 103 GLAPAAHGGNRTGRMFTGDASGEVLYAAMHAVGLANQPEAVSRDDGLRLLGARITAPVKC 162

Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQKTYQNLGKW 216
            PP N   +  E + CRP + R++ L+ P  + ++ +G           A        + 
Sbjct: 163 APPDN-APTPAERDTCRPWLERELTLLRPTLRAVVVLGGFGWQSLLPALAAHWTVPRPRP 221

Query: 217 S-------NLCTPHSIIPTL--ATVH 233
                    L       P +     H
Sbjct: 222 RFTHGARVELPASDDGPPLVLHGCYH 247


>gi|206603221|gb|EDZ39701.1| Putative uracil-DNA glycosylase [Leptospirillum sp. Group II '5-way
           CG']
          Length = 237

 Score = 66.7 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 69/233 (29%), Gaps = 43/233 (18%)

Query: 68  DSIAQKACSLHELKSLLRSFHDCHL-------------CSTSLST-----ICATQTEGQD 109
           + +A +  SL  L   +     C                ST   T     +         
Sbjct: 2   EEVAVEEDSLGRLSGEIVVCRQCDRLVSWREESGRVKRASTRTETYWSRPLPGFGDSEAL 61

Query: 110 LMIIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQSIEIMRTQI-------------HISM 154
           L IIG  P+    N +G+ F+G ++G+ L + L      R                 IS 
Sbjct: 62  LWIIGLAPAAHGGNRTGRVFTGDRSGDFLFRCLYETGWSRYPTVWGRKDGQTLFGAWISA 121

Query: 155 ISPWHPPGNRNLSNIEMEICRPIIMRQIEL-ISPKILLFIGNKTKN---FFFNNDAQKTY 210
                PP N   S  E   CRP + R+       + +L +G                   
Sbjct: 122 AVRCAPPENT-PSPEEFLRCRPFLEREFRQLTKVRAVLVLGALALREWMTLLGKHDPSLL 180

Query: 211 QNLGKW---SNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
           Q    +   +++  P        + HP +  +       T   +  L + ++ 
Sbjct: 181 QKKPSFVHGTHMVFPDPTPRLFISYHPSQ--RNTQTGLLTKEMMCRLLREIRA 231


>gi|297198949|ref|ZP_06916346.1| uracil-DNA glycosylase [Streptomyces sviceus ATCC 29083]
 gi|197711125|gb|EDY55159.1| uracil-DNA glycosylase [Streptomyces sviceus ATCC 29083]
          Length = 243

 Score = 66.7 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/223 (13%), Positives = 66/223 (29%), Gaps = 42/223 (18%)

Query: 77  LHELKSLLRSFHDCHL------------------CSTSLSTICATQTEGQDLMIIGYTPS 118
           L +L   +     C                     +     +         ++I+G  P+
Sbjct: 4   LADLDRRISGCRACPRLVDWREEVARTKRAAFADWTYWGRPVPGFGPADARMLIVGLAPA 63

Query: 119 DS-DNISGKPFSG-KTGNMLDKML-------------QSIEIMRTQIHISMISPWHPPGN 163
               N +G+ F+G ++G++L + L                 +    + I+      PP  
Sbjct: 64  AHGGNRTGRMFTGDRSGDVLYQALYDIGLASQSTAVTADDGLELHGVRITSPVHCAPP-A 122

Query: 164 RNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFF-NNDAQKTYQNLGKW---S 217
              +  E + CRP +++++ L+ P  + ++ +G            A        +     
Sbjct: 123 NKPTPGERDTCRPWLVQELNLLRPTLRTVVVLGAFGWQAALPAFTAAGWSVPRPRPAFGH 182

Query: 218 NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
               P   +      H  +  +     K T   L  + +    
Sbjct: 183 GARVPLDGLELFGCFHVSQ--RNTFTGKLTPEMLRDVLRTAAE 223


>gi|46199090|ref|YP_004757.1| uracil-DNA glycosylase [Thermus thermophilus HB27]
 gi|55981118|ref|YP_144415.1| uracil-DNA glycosylase [Thermus thermophilus HB8]
 gi|118137482|pdb|2D3Y|A Chain A, Crystal Structure Of Uracil-Dna Glycosylase From Thermus
           Thermophilus Hb8
 gi|134104100|pdb|2DDG|A Chain A, Crystal Structure Of Uracil-Dna Glycosylase In Complex
           With Ap:g Containing Dna
 gi|146386734|pdb|2DEM|A Chain A, Crystal Structure Of Uracil-Dna Glycosylase In Complex
           With Ap:a Containing Dna
 gi|149241082|pdb|2DP6|A Chain A, Crystal Structure Of Uracil-Dna Glycosylase In Complex
           With Ap:c Containing Dna
 gi|21464614|emb|CAD29337.1| uracil-DNA glycosylase [Thermus thermophilus HB27]
 gi|46196714|gb|AAS81130.1| uracil-DNA glycosylase [Thermus thermophilus HB27]
 gi|55772531|dbj|BAD70972.1| uracil-DNA glycosylase [Thermus thermophilus HB8]
          Length = 219

 Score = 66.7 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 62/210 (29%), Gaps = 28/210 (13%)

Query: 74  ACSLHELKSLL----RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD-NISGKPF 128
              L   +  +    R+F      +     +         +++ G  P     N +G+PF
Sbjct: 16  CPRLVAWREEVVGRKRAFRGEPYWA---RPVPGFGDPEARILLFGLAPGAHGSNRTGRPF 72

Query: 129 SGK-TGNMLDKMLQSIE------------IMRTQIHISMISPWHPPGNRNLSNIEMEICR 175
           +G  +G  L  +L                +    ++++      PP N   +  E+  C 
Sbjct: 73  TGDASGAFLYPLLHEAGLSSKPESLPGDDLRLYGVYLTAAVRCAPPKN-KPTPEELRACA 131

Query: 176 PIIMRQIE-LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHP 234
                ++  L   ++ + +G         +   +   +  +             LA+ H 
Sbjct: 132 RWTEVELGLLPEVRVYVALGRIALEALLAHFGLRKSAHPFRHGAHYPLPGGRHLLASYHV 191

Query: 235 QELIQYPLIKKNTWHALITL---KKALKNL 261
               Q     + T    + +    K L  L
Sbjct: 192 S--RQNTQTGRLTREMFLEVLMEAKRLAGL 219


>gi|91762006|ref|ZP_01263971.1| uracil-DNA glycosylase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717808|gb|EAS84458.1| uracil-DNA glycosylase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 224

 Score = 66.7 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/205 (12%), Positives = 57/205 (27%), Gaps = 40/205 (19%)

Query: 77  LHELKSLLRSFHDCHL-------------CSTSL-----STICATQTEGQDLMIIGYTPS 118
             +L + +     C                           +         L+I+G  P+
Sbjct: 5   FKKLNNSIVKCKSCPRLIAFSKKISIEKRKQNMKDTYWAKPVTGFGDIKAKLLIVGLAPA 64

Query: 119 DS-DNISGKPFSGKT-GNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGN 163
                 +G+ F+G   G+ L   L                 +   + +I+ I    PP +
Sbjct: 65  AHGGTRTGRAFTGDKSGDFLFNCLFKANISNISTSKHIDDGLKLNKTYITNILKCVPPED 124

Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS----NL 219
           + L N               L + K+++ +G  + +       +  + +           
Sbjct: 125 KPLKNELSNCSTFFKNELTLLKNLKVIIALGKVSFDNCIEFYKKNYHFDKKLIFIHGVKY 184

Query: 220 CTPHSIIPTLATVHPQELIQYPLIK 244
             P + I  + + HP    +    K
Sbjct: 185 LLPDNKI-LIPSYHPSP--RNVNRK 206


>gi|325003192|ref|ZP_08124304.1| hypothetical protein PseP1_30695 [Pseudonocardia sp. P1]
          Length = 244

 Score = 66.7 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 57/200 (28%), Gaps = 43/200 (21%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLMII 113
                L  L   +     C                           +         ++I+
Sbjct: 4   DLPGPLDLLDRDISECRACPRLVEWRERVAVEKRAAFRDQTYWGRPVPGFGPPDARMLIV 63

Query: 114 GYTPSDSD-NISGKPFSG-KTGNMLDKMLQS-------------IEIMRTQIHISMISPW 158
           G  P+    N +G+ F+G ++G++L   L +               +    + I+     
Sbjct: 64  GLAPAAHGANRTGRMFTGDRSGDVLYAGLHAVGLASQPTATHIGDGLELYGVRITAPVHC 123

Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNN-DAQKTYQNLGK 215
            PP     +  E + CR  + R+++L++P  + ++ +G                      
Sbjct: 124 APP-ANKPTPAERDTCRGWLERELDLLAPTVRSIMVLGGFGWQALLPVLAGAGWTVPR-- 180

Query: 216 WSNLCTPHSIIPTLATVHPQ 235
                 P        T+HP 
Sbjct: 181 ----PAPRFGHGASVTLHPA 196


>gi|302035873|ref|YP_003796195.1| putative uracil-DNA glycosylase [Candidatus Nitrospira defluvii]
 gi|300603937|emb|CBK40269.1| putative Uracil-DNA glycosylase [Candidatus Nitrospira defluvii]
          Length = 232

 Score = 66.3 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 59/199 (29%), Gaps = 42/199 (21%)

Query: 77  LHELKSLLRSFHDCHL------------------CSTSLSTICATQTEGQDLMIIGYTPS 118
           L  L + + +   C                     S     +         L ++G  P+
Sbjct: 4   LSILNNDIVACTRCPRLVAYREAVARDKRRQFRDWSYWGKPVPGFGDPNAKLYVLGLAPA 63

Query: 119 DS-DNISGKPFSG-KTGNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGN 163
               N +G+ F+G ++G+ L + L                    T  +I       PP  
Sbjct: 64  AHGGNRTGRVFTGDRSGDWLYEALHRFGFANQATSIHAGDGLTLTDCYIGATVRCAPP-A 122

Query: 164 RNLSNIEMEICRPIIMRQIELISP-KILLFIGNKT------KNFFFNNDAQKTYQNLGKW 216
              +  E   CRP ++R++ L+   ++++ +G          +              G  
Sbjct: 123 NKPTPDEFTACRPFVLRELRLLKRMRVVVTLGKIAFDHYLKASRELGLAPPSPLPLFGHE 182

Query: 217 SNLCTPHSIIPTLATVHPQ 235
                P   +  + + HP 
Sbjct: 183 VVYDLPW-GVTLVGSYHPS 200


>gi|91228706|ref|ZP_01262619.1| hypothetical protein V12G01_00045 [Vibrio alginolyticus 12G01]
 gi|269965865|ref|ZP_06179959.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|91187732|gb|EAS74051.1| hypothetical protein V12G01_00045 [Vibrio alginolyticus 12G01]
 gi|269829529|gb|EEZ83769.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 190

 Score = 66.3 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 72/181 (39%), Gaps = 17/181 (9%)

Query: 76  SLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
           SL EL   +R+   C  +L   +   + A   +G  ++IIG  P    + +  P++  +G
Sbjct: 2   SLDELLQQVRACQICADNLPLGANPVVQA--AKGARILIIGQAPGTRVHKTSIPWNDPSG 59

Query: 134 NMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--K 188
           + L + L     +     +I I  +   +P    +      + C P   ++I    P  +
Sbjct: 60  DRLRQWLDIDKDVFYDPNKIAIVPMGFCYPGKGNSGDLPPRKECAPTWHKKILEQLPNIE 119

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247
           + L IG  ++ ++  N  +   Q + +W +          +   HP    +  L  KKN 
Sbjct: 120 LTLLIGQYSQQYYLTNKPKTLTQTVQQWQDWEPDF-----IPLPHPSP--RNTLWLKKNP 172

Query: 248 W 248
           W
Sbjct: 173 W 173


>gi|300789996|ref|YP_003770287.1| uracil-DNA glycosylase [Amycolatopsis mediterranei U32]
 gi|299799510|gb|ADJ49885.1| uracil-DNA glycosylase [Amycolatopsis mediterranei U32]
          Length = 227

 Score = 66.3 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 53/197 (26%), Gaps = 39/197 (19%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSL-----------------STICATQTEGQDLMIIGYTP 117
            SL EL + +     C                          +         L ++G  P
Sbjct: 2   RSLSELDTAVAGCRACPRLVAWREGVAGTKAAFRGEEYWARPVPGFGPPDASLAVVGLAP 61

Query: 118 SDSD-NISGKPFSGKT-GNMLDKMLQS-------------IEIMRTQIHISMISPWHPPG 162
           S    N +G+ F+G   G+ L ++L                 +      +       PP 
Sbjct: 62  SAHGANRTGRMFTGDPSGDFLFRVLHEVGLASQPTSERLGDGLQLYGTRLVSPVRCAPPE 121

Query: 163 NRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFN---NDAQKTYQNLGKW- 216
           N   +  E + CRP +  ++ L+ P  + ++ +G                   Q    + 
Sbjct: 122 N-KPTPAERDTCRPWLAGELALLRPTLRAIVVLGAFGWQALLPVLEAAGWPVPQPRPAFA 180

Query: 217 SNLCTPHSIIPTLATVH 233
                    +      H
Sbjct: 181 HGAVVELGDLRLFGCYH 197


>gi|257057186|ref|YP_003135018.1| uracil-DNA glycosylase [Saccharomonospora viridis DSM 43017]
 gi|256587058|gb|ACU98191.1| uracil-DNA glycosylase [Saccharomonospora viridis DSM 43017]
          Length = 235

 Score = 66.3 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 60/201 (29%), Gaps = 43/201 (21%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLMIIGYT 116
            SL +L + +     C                           +     +   L+I+G  
Sbjct: 6   KSLAQLDAAVSKCRACPRLVRWREQVARTKRAAYADQTYWGRPVPGFGPDDASLVIVGLA 65

Query: 117 PSDS-DNISGKPFSG-KTGNMLDKML-------------QSIEIMRTQIHISMISPWHPP 161
           P+    N +G+ F+G ++G++L + L             +   +      I+      PP
Sbjct: 66  PAAHGGNRTGRMFTGDRSGDVLFRALYDVGLASQPTSVHRDDGLTLRGTRITAPVHCAPP 125

Query: 162 GNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFF------NNDAQKTYQNL 213
                +  E + CR  +  ++ L+ P  K ++ +G                   +     
Sbjct: 126 -ANKPTPAERDTCRHWLADELTLLRPTLKAIVVLGAFGWQALLPVLAEAGWRVPRPKPRF 184

Query: 214 GK-WSNLCTPHSIIPTLATVH 233
           G          + +  L + H
Sbjct: 185 GHGVRITLDGPTPLHVLGSYH 205


>gi|71083573|ref|YP_266292.1| uracil-DNA glycosylase [Candidatus Pelagibacter ubique HTCC1062]
 gi|71062686|gb|AAZ21689.1| uracil-DNA glycosylase [Candidatus Pelagibacter ubique HTCC1062]
          Length = 224

 Score = 66.3 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 59/205 (28%), Gaps = 40/205 (19%)

Query: 77  LHELKSLLRSFHDCHL-------------CSTSL-----STICATQTEGQDLMIIGYTPS 118
             +L + +     C                           +         L+I+G  P+
Sbjct: 5   FKKLNNSIVKCKSCPRLIEFSKKISVKKRKQNMKETYWAKPVTGFGDINAKLLIVGLAPA 64

Query: 119 DS-DNISGKPFSGKT-GNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGN 163
                 +G+ F+G   G+ L   L                 +   + +I+ I    PP +
Sbjct: 65  AHGGTRTGRAFTGDKSGDFLFNCLFKANISNRSTSTHIDDGLKLNKTYITNILKCVPPED 124

Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS----NL 219
           + L N  +          I L + K+++ +G  + +       +  + +           
Sbjct: 125 KPLKNELINCSTFFKNELILLKNLKVIIALGKVSFDNCIEFYKKNYHFDKKLIFIHGVKY 184

Query: 220 CTPHSIIPTLATVHPQELIQYPLIK 244
             P + I  + + HP    +    K
Sbjct: 185 LLPDNKI-LIPSYHPSP--RNVNRK 206


>gi|300709426|ref|YP_003735240.1| Uracil-DNA glycosylase superfamily protein [Halalkalicoccus
           jeotgali B3]
 gi|299123109|gb|ADJ13448.1| Uracil-DNA glycosylase superfamily protein [Halalkalicoccus
           jeotgali B3]
          Length = 291

 Score = 66.3 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 57/184 (30%), Gaps = 35/184 (19%)

Query: 86  SFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPS----DSDNISGKPFSGK------TGN 134
           +   C  L  T       T      ++++G  P     ++D   G  ++G       +G 
Sbjct: 80  NCTRCPHLAETRECISWGTGPLDSPVLVVGEAPGSGAPEADLWKGGNWTGMAYTARHSGR 139

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPG---------------------NRNLSNIEMEI 173
           ++  +++S+       + +      PP                      NR  ++ E+  
Sbjct: 140 VIRDLMESVGYH--DAYYTNAVKCFPPDVPASEASGSSSEPGSDGGKVSNREPTDEELAT 197

Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNND-AQKTYQNLGKWSNLCTPHSIIPTLATV 232
           CR  ++ ++E + P  ++  G          D            + +       P L  +
Sbjct: 198 CRTHLVTEVEEVEPDAIVPTGKHATETLLTLDEKSLDGFTDHVLTPIDCEALSTPLLPVL 257

Query: 233 HPQE 236
           HP  
Sbjct: 258 HPSY 261


>gi|83945627|ref|ZP_00957973.1| Uracil-DNA glycosylase [Oceanicaulis alexandrii HTCC2633]
 gi|83850993|gb|EAP88852.1| Uracil-DNA glycosylase [Oceanicaulis alexandrii HTCC2633]
          Length = 198

 Score = 66.3 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 68/204 (33%), Gaps = 24/204 (11%)

Query: 74  ACSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
           A S  +LK  +R+   C  HL       +         + IIG  P      SGKPF+  
Sbjct: 2   AESFDQLKREIRACRVCQPHLGHPVRPVV--RGEASARIRIIGQAPGTRVQASGKPFTDP 59

Query: 132 TGNMLDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIEL 184
           +G+ L   +   +        I I+ +    P     G       E             L
Sbjct: 60  SGDRLRDWMGVSEDAFYDERAIAITPMGFCFPGLDAKGGDKPPRREC-APLWQDRASRAL 118

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQ-----ELI 238
            +  + L +G   + +     A KT  + + +W      +  +P     HP       L 
Sbjct: 119 PNVGLTLLVGAHAQRWHLGTQAAKTLTETVKQWRLHLPDYVALP-----HPSWRNTGWLK 173

Query: 239 QYPLIKKNTWHALIT-LKKALKNL 261
           + P  ++     L   +++ L +L
Sbjct: 174 RNPWFEQEVLPELKARVREMLNSL 197


>gi|221069959|ref|ZP_03546064.1| phage SPO1 DNA polymerase-related protein [Comamonas testosteroni
           KF-1]
 gi|220714982|gb|EED70350.1| phage SPO1 DNA polymerase-related protein [Comamonas testosteroni
           KF-1]
          Length = 303

 Score = 66.3 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 48/140 (34%), Gaps = 8/140 (5%)

Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEM 171
           ++      + + +     G    +LD ML+++ +       S      PP         +
Sbjct: 162 LLSPAQRPAADCAQTALQGDAARLLDNMLRALGLQEKPRVFSAALHRAPPDADLSHAQAL 221

Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231
           +     ++R++    P  +L +G  +               LG+        + +PT+ T
Sbjct: 222 QPALETLLREL---RPDCVLVLGLASARAVLGRH-----DALGRLRAEPHHIAGVPTVVT 273

Query: 232 VHPQELIQYPLIKKNTWHAL 251
             P  L++ P  K   W  L
Sbjct: 274 YDPNYLLRAPQAKAGAWADL 293


>gi|108760152|ref|YP_631779.1| uracil-DNA glycosylase family protein [Myxococcus xanthus DK 1622]
 gi|108464032|gb|ABF89217.1| putative uracil-DNA glycosylase, family 4 [Myxococcus xanthus DK
           1622]
          Length = 235

 Score = 66.3 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 56/196 (28%), Gaps = 41/196 (20%)

Query: 77  LHELKSLLRSFHDCHL------------------CSTSLSTICATQTEGQDLMIIGYTPS 118
           L  L   +     C                     +     +         L+I+G  P+
Sbjct: 4   LESLHKEITDCRACPRLVEWREEVARVKRRAYRDWNYWGLPVPGFGDPKARLIIVGLAPA 63

Query: 119 DSD-NISGKPFSG-KTGNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGN 163
               N +G+ F+G ++G+ L   L                 +      I   +   PP N
Sbjct: 64  AHGANRTGRMFTGDRSGDFLYAGLHRAGFANQALSEHRDDGLRLKDAFIVSAARCAPPDN 123

Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF------NNDAQKTYQNLGKWS 217
                 E+  C P + R++ L+  +++L +G    N           +        G  +
Sbjct: 124 -KPLPEELARCAPFLDRELALLPGRVMLALGAIGWNAALVALARQGMEVPSPRPAFGHGA 182

Query: 218 NLCTPHSIIPTLATVH 233
            L  P      L   H
Sbjct: 183 ELRLPG-GRTLLGCYH 197


>gi|302550698|ref|ZP_07303040.1| uracil-DNA glycosylase [Streptomyces viridochromogenes DSM 40736]
 gi|302468316|gb|EFL31409.1| uracil-DNA glycosylase [Streptomyces viridochromogenes DSM 40736]
          Length = 247

 Score = 66.3 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/213 (12%), Positives = 59/213 (27%), Gaps = 40/213 (18%)

Query: 60  HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL------------------STIC 101
                  A   A  A  L  L   +     C    +                      + 
Sbjct: 2   RGADPTAAYGGAMDASGLPLLDQRISDCRACPRLVSWREEVAREKRAAYADWTYWGRPVP 61

Query: 102 ATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKML-------------QSIEIM 146
                   L+I+G  P+    N +G+ F+G ++G++L + L                 + 
Sbjct: 62  GFGPADARLLIVGLAPAAHGGNRTGRMFTGDRSGDVLYEALYDVGLASQPTAVHADDGLE 121

Query: 147 RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFF-N 203
              + ++      PP     +  E + CRP +++++ L+ P  + ++ +G          
Sbjct: 122 LYGVRVTSPVHCAPP-ANKPTPEERDACRPWLVQELRLLRPTLRAVVVLGAFGWQAALPA 180

Query: 204 NDAQKTYQNLGKW---SNLCTPHSIIPTLATVH 233
                      +             +      H
Sbjct: 181 FTEAGWSVPRPRPAFAHGARFELDGLDLFGCFH 213


>gi|284047227|ref|YP_003397567.1| uracil-DNA glycosylase superfamily [Conexibacter woesei DSM 14684]
 gi|283951448|gb|ADB54192.1| Uracil-DNA glycosylase superfamily [Conexibacter woesei DSM 14684]
          Length = 233

 Score = 66.3 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 59/199 (29%), Gaps = 43/199 (21%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTI------------------CATQTEGQDLMIIGYTPS 118
           L  L + +     C    +    +                           L+++G  P+
Sbjct: 8   LAALTAEVVDCRRCPRLVSWREQVATEKRAAFADQEYWGRPAPGFGDPDARLLVLGLAPA 67

Query: 119 DSD-NISGKPFSG-KTGNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGN 163
               N +G+ F+G ++G+ L   L    +                  +++      PP  
Sbjct: 68  AHGANRTGRVFTGDRSGDWLYAALWRCGMANQPTSVSRDDGLELHGAYVTAAVRCAPP-A 126

Query: 164 RNLSNIEMEICRPIIMRQIELIS-PKILLFIGNKTK------NFFFNNDAQKTYQNLGKW 216
                 E + C P ++R++EL+   + +L +G               + A +     G  
Sbjct: 127 NKPLPAERDTCFPYLVRELELLREVRAILCLGGFAWDAALRLRAALGDPAPRPKPRFG-- 184

Query: 217 SNLCTPHSIIPTLATVHPQ 235
                P +    +   HP 
Sbjct: 185 HGAELPGARWALIGCYHPS 203


>gi|299529391|ref|ZP_07042829.1| hypothetical protein CTS44_01420 [Comamonas testosteroni S44]
 gi|298722640|gb|EFI63559.1| hypothetical protein CTS44_01420 [Comamonas testosteroni S44]
          Length = 299

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 46/135 (34%), Gaps = 10/135 (7%)

Query: 117 PSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP 176
           P+     +     G    +LD ML+++ +       S      PP         ++    
Sbjct: 165 PAADSAQT--ALQGDAAKLLDNMLRALGLQEKPRVFSAALHRAPPDADLSHAQALQPALE 222

Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236
            ++R++    P  +L +G  +               LG+        + +PT+ T  P  
Sbjct: 223 ALLREL---RPDCVLVLGLASARAVLGRH-----DALGRLRAEPHHIAGVPTVVTYDPNY 274

Query: 237 LIQYPLIKKNTWHAL 251
           L++ P  K   W  L
Sbjct: 275 LLRAPQAKAGAWADL 289


>gi|328471090|gb|EGF41996.1| hypothetical protein VP10329_00110 [Vibrio parahaemolyticus 10329]
          Length = 190

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 70/181 (38%), Gaps = 17/181 (9%)

Query: 76  SLHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
           SL  L   +R+   C   L   + + +     +   ++IIG  P    + +  P++  +G
Sbjct: 2   SLENLLQQVRACQICAESLPLGA-NPVVQAG-KNARILIIGQAPGTKVHSTSIPWNDPSG 59

Query: 134 NMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--K 188
           + L + L     +     +I I  +   +P    +      + C PI  ++I    P  +
Sbjct: 60  DRLRQWLDIDKDVFYEPNKIAIVPMGFCYPGKGNSGDMPPRKECAPIWHKKILEQLPNIE 119

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247
           + L IG  ++ ++  N  +   Q + +W +          +   HP    +  L  KKN 
Sbjct: 120 LTLLIGQYSQQYYLTNKPKTLTQTVQQWQDWEPEF-----IPLPHPSP--RNTLWLKKNP 172

Query: 248 W 248
           W
Sbjct: 173 W 173


>gi|264680721|ref|YP_003280631.1| hypothetical protein CtCNB1_4589 [Comamonas testosteroni CNB-2]
 gi|262211237|gb|ACY35335.1| hypothetical protein CtCNB1_4589 [Comamonas testosteroni CNB-2]
          Length = 301

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 46/135 (34%), Gaps = 10/135 (7%)

Query: 117 PSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP 176
           P+     +     G    +LD ML+++ +       S      PP         ++    
Sbjct: 167 PAADSAQT--ALQGDAAKLLDNMLRALGLQEKPRVFSAALHRAPPDADLSHAQALQPALE 224

Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236
            ++R++    P  +L +G  +               LG+        + +PT+ T  P  
Sbjct: 225 TLLREL---RPDCVLVLGLASARAVLGRH-----DALGRLRAEPHHIAGVPTVVTYDPNY 276

Query: 237 LIQYPLIKKNTWHAL 251
           L++ P  K   W  L
Sbjct: 277 LLRAPQAKAGAWADL 291


>gi|254455448|ref|ZP_05068877.1| uracil-DNA glycosylase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082450|gb|EDZ59876.1| uracil-DNA glycosylase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 226

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/217 (12%), Positives = 57/217 (26%), Gaps = 50/217 (23%)

Query: 84  LRSFHDCHL-----CSTSLS-------------TICATQTEGQDLMIIGYTPSDS-DNIS 124
           +     C          S +              +         ++I+G  P+      +
Sbjct: 12  IIKCKKCPRLVEFIKKISTNKRKQNINETYWGKPVTGFGDINAKILILGLAPAAHGGTRT 71

Query: 125 GKPFSGKT-GNMLDKMLQS-------------IEIMRTQIHISMISPWHPPGNRNLSNIE 170
           G+ F+G   G  L K L                 +     +I+ I    PP ++ L +  
Sbjct: 72  GRAFTGDKSGEFLFKCLHEVKIANQSRSENINDNLKLDDAYITNILKCVPPNDKPLKDEL 131

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230
               +        L   K ++ +G    +    +  ++   N      +   H     + 
Sbjct: 132 NNCSKYFDFEIKNLKKLKTIIALGKVAFDSCIKHYKKRYKIN----KKIVFKHGKFYLMP 187

Query: 231 -------TVHPQELIQYPLIK----KNTWHALITLKK 256
                    HP    +    K    K   +    +K+
Sbjct: 188 DNIVLISCYHPSP--RNVNTKLISLKMMVNLFKKVKR 222


>gi|189219255|ref|YP_001939896.1| Uracil-DNA glycosylase [Methylacidiphilum infernorum V4]
 gi|189186113|gb|ACD83298.1| Uracil-DNA glycosylase [Methylacidiphilum infernorum V4]
          Length = 236

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 65/210 (30%), Gaps = 46/210 (21%)

Query: 70  IAQKACSLHELKSLLRSFHDCH---------LCS---------TSLSTICATQTEGQDLM 111
           +   A  L  L   + +   C          L                +        +L+
Sbjct: 1   MPTPAKELSYLNEKIVACRLCPRLVAWREEILKKKPKRFAAESYWSRPVPGFGDPLAELL 60

Query: 112 IIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQSIEIM-------------RTQIHISMIS 156
           I+G  P+    N +G+ F+G ++G+ L + L                     +++I+   
Sbjct: 61  IVGLAPAAHGGNRTGRIFTGDRSGDFLFETLHRFGYSSSPRSISREDSLVLNKVYITATV 120

Query: 157 PWHPPGNRNLSNIEMEICRPIIMRQIEL-ISPKILLFIGNKTKNFF----------FNND 205
              PP N   S  E+  CRP ++ ++ +  + +++L +G    +                
Sbjct: 121 RCAPPNN-KPSPEEIAHCRPYLIEELRILKNIRVILALGRIAFDNVWQTVKLTFQSQGKS 179

Query: 206 AQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
                 +         P   +  + + HP 
Sbjct: 180 FACKKPSFSHGIEQKLPDGKV-LIGSFHPS 208


>gi|149200955|ref|ZP_01877930.1| uracil-DNA glycosylase, putative [Roseovarius sp. TM1035]
 gi|149145288|gb|EDM33314.1| uracil-DNA glycosylase, putative [Roseovarius sp. TM1035]
          Length = 195

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 66/198 (33%), Gaps = 23/198 (11%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICA-----TQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
           + +L + +R+   C     +  T  A            L+I G  P    + SGKPF   
Sbjct: 1   MSDLTAEIRACRLCADRFAATHTAHAPRPVVWFQPTARLLIAGQAPGLRVHQSGKPFDDP 60

Query: 132 TGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI---CRPIIMRQIELI 185
           +G+ L   L         ++++ I  ++   P  +   S++           +       
Sbjct: 61  SGDRLRDWLGLNACEFYDKSRVAIVPMAFCFPGYDAKGSDLPPPRICGRTWHVRVMQAFE 120

Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-K 244
           + ++ + +G     +          Q +  W +       +P     HP    +     K
Sbjct: 121 NVRLTVLVGGYAHKYHLGVKTGV-TQTVQAWRDYAPRIFTLP-----HPSW--RNTAWLK 172

Query: 245 KNTW--HALI-TLKKALK 259
           K+ W    ++  L+  ++
Sbjct: 173 KHPWFEADVLPELRAQIQ 190


>gi|331694769|ref|YP_004331008.1| uracil-DNA glycosylase [Pseudonocardia dioxanivorans CB1190]
 gi|326949458|gb|AEA23155.1| Uracil-DNA glycosylase superfamily [Pseudonocardia dioxanivorans
           CB1190]
          Length = 237

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/204 (13%), Positives = 59/204 (28%), Gaps = 44/204 (21%)

Query: 73  KACSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLMIIG 114
              +L  L   +     C                           +         L+I+G
Sbjct: 3   APATLALLDDEVSRCRACPRLVAWREKVAAEKRAAYRDQTYWGRPVPGFGPADAALLIVG 62

Query: 115 YTPSDS-DNISGKPFSG-KTGNMLDKMLQSIEIMRTQ-------------IHISMISPWH 159
             P+    N +G+ F+G ++G++L   L ++ +                   I+      
Sbjct: 63  LAPAAHGGNRTGRMFTGDRSGDVLYAALHAVGLANQPIAVSADDGLALRGTRITAPVHCA 122

Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFF--------NNDAQKT 209
           PP N   +  E + CR  +  ++ L++P  + ++ +G                +    + 
Sbjct: 123 PPDN-KPTTEERDTCRRWLDAELALLAPTLRTVVVLGAFGWQSLLPVLGENGWDVPRPRP 181

Query: 210 YQNLGKWSNLCTPHSIIPTLATVH 233
               G    L      +    + H
Sbjct: 182 RFGHGAHVVLTGRRGPLQVFGSYH 205


>gi|315426583|dbj|BAJ48212.1| uracil-DNA glycosylase superfamily protein [Candidatus
           Caldiarchaeum subterraneum]
          Length = 231

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 67/204 (32%), Gaps = 45/204 (22%)

Query: 76  SLHELKSLLRSFHDCH-LCSTSL-----------------STICATQTEGQDLMIIGYTP 117
           S  +L + + S   C  L                        +      G  ++++G  P
Sbjct: 2   SFEDLNNRIISCKLCPRLVKYREEVAKNPPKRFRGQTYWAKPLPGFGDVGARVLVLGLAP 61

Query: 118 SDS-DNISGKPFSGK-TGNMLDKMLQSIEIMRT-------------QIHISMISPWHPPG 162
           +    N +G+ F+G  +G+ L + L                      ++I+ +    PP 
Sbjct: 62  AAHGGNRTGRMFTGDSSGDTLVRALHRAGFANMGRSISINDGLVLKDVYITAVVRCAPPD 121

Query: 163 NRNLSNIEMEICRPIIMRQIEL-ISPKILLFIGNKTKNFFF-------NNDAQKTYQNLG 214
           N   +  E+E C P ++ ++ +  +  +++ +G      FF           +      G
Sbjct: 122 N-KPAKQEVENCLPYLIEELRMLENVVVVVALGRFAFETFFRLMRRMNAYSGRIPRFRHG 180

Query: 215 KWSNLCTPHSIIP---TLATVHPQ 235
               L    +  P    +A+ HP 
Sbjct: 181 AVYRLNGSFNGKPLPTVIASYHPS 204


>gi|315425049|dbj|BAJ46722.1| uracil-DNA glycosylase [Candidatus Caldiarchaeum subterraneum]
          Length = 231

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 67/204 (32%), Gaps = 45/204 (22%)

Query: 76  SLHELKSLLRSFHDCH-LCSTSL-----------------STICATQTEGQDLMIIGYTP 117
           S  +L + + S   C  L                        +      G  ++++G  P
Sbjct: 2   SFEDLNNRIISCKLCPRLVKYREEVAKNPPKRFRGQTYWAKPLPGFGDVGARVLVLGLAP 61

Query: 118 SDS-DNISGKPFSGK-TGNMLDKMLQSIEIMRT-------------QIHISMISPWHPPG 162
           +    N +G+ F+G  +G+ L + L                      ++I+ +    PP 
Sbjct: 62  AAHGGNRTGRMFTGDSSGDTLVRALHRAGFANMGRSISINDGLVLKDVYITAVVRCAPPD 121

Query: 163 NRNLSNIEMEICRPIIMRQIEL-ISPKILLFIGNKTKNFFF-------NNDAQKTYQNLG 214
           N   +  E+E C P ++ ++ +  +  +++ +G      FF           +      G
Sbjct: 122 N-KPAKQEVENCLPYLIEELRMLENVVVVVALGRFAFETFFRLMRRMNAYSGRIPRFRHG 180

Query: 215 KWSNLCTPHSIIP---TLATVHPQ 235
               L    +  P    +A+ HP 
Sbjct: 181 AVYRLNGSFNGKPLPTVIASYHPS 204


>gi|160896423|ref|YP_001562005.1| phage SPO1 DNA polymerase-like protein [Delftia acidovorans SPH-1]
 gi|160362007|gb|ABX33620.1| phage SPO1 DNA polymerase-related protein [Delftia acidovorans
           SPH-1]
          Length = 320

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 52/166 (31%), Gaps = 16/166 (9%)

Query: 102 ATQTEGQDLMIIGYTPS----------DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH 151
               EG   +I+   P+             + +     G    +LD ML+++ +      
Sbjct: 148 GDGGEGG-WLILLEPPANSLPLPPAQRPGPDCARTALEGDAARLLDNMLRALNLQDHPRL 206

Query: 152 ISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQ 211
            S       P        E+   +P +   +  + P  +L +G  T             +
Sbjct: 207 YSAALHRVQPAAEGQEAPEVPALQPSLEALLRDLRPACVLVLGLATARAVLQRQ-----E 261

Query: 212 NLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKA 257
            LG+        + +P + +  P  L++ P  K   W  L   +  
Sbjct: 262 ALGRLRAEPHRIAGVPAVVSYDPNYLLRAPQAKAGAWADLCHAQAF 307


>gi|126733709|ref|ZP_01749456.1| Uracil-DNA glycosylase superfamily protein [Roseobacter sp. CCS2]
 gi|126716575|gb|EBA13439.1| Uracil-DNA glycosylase superfamily protein [Roseobacter sp. CCS2]
          Length = 193

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 67/201 (33%), Gaps = 31/201 (15%)

Query: 80  LKSLLRSFHDCHLCSTSLST-------ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
           L+  + +   C     + +T       +         ++I    P    + +G PF  ++
Sbjct: 3   LQEEISACTLCRDRFAATATRHQPRPIVWFETPP--RILIASQAPGMRVHAAGTPFWDRS 60

Query: 133 GNMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRN-----LSNIEMEICRPIIMRQIEL 184
           G+ L   L         R++I I  ++   P  +          I        +M  +  
Sbjct: 61  GDRLRDWLGVNPDTFYDRSKIAIVPMAFCFPGYDAKGSDLPPPPICRATWHDRVMAALGQ 120

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI- 243
           +  K  L +G     +  N+ +  T    G W +L             HP    +     
Sbjct: 121 VQLK--LLVGGYAHRWHLNSRSGVTETVRG-WRDL-----GPRVFPLPHPSW--RNTAWL 170

Query: 244 KKNTW--HALI-TLKKALKNL 261
           KKN W    L+  L+ A+K++
Sbjct: 171 KKNPWFEADLLPELRAAVKDV 191


>gi|259419017|ref|ZP_05742934.1| uracil-DNA glycosylase superfamily protein [Silicibacter sp.
           TrichCH4B]
 gi|259345239|gb|EEW57093.1| uracil-DNA glycosylase superfamily protein [Silicibacter sp.
           TrichCH4B]
          Length = 222

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 64/198 (32%), Gaps = 25/198 (12%)

Query: 80  LKSLLRSFHDCHLCSTSLST------ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
           LK  + +   C     +  T      +      G  ++I G  P    + SGKPF+  +G
Sbjct: 30  LKHQIAACTLCATRFAATETAHQPRPVVWF-QPGARILIAGQAPGLRVHESGKPFTDPSG 88

Query: 134 NMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLS--NIEMEICRPIIMRQIEL-ISP 187
           + L   L   +     ++++ I  ++   P  +   +              R +E     
Sbjct: 89  DRLRDWLGLNEEEFYDQSRVAIVPMAFCFPGYDAKNADLPPPPICGETWHDRVMEALCRV 148

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKN 246
           ++ + +G     +        T      W +L          A  HP    +     K+N
Sbjct: 149 RLRIIVGGHAHRYHLKTRKGVTEVVR-DWRSLPDG-----VFALPHPSW--RNTAWLKRN 200

Query: 247 TW---HALITLKKALKNL 261
            W     L  L+  +K L
Sbjct: 201 PWFETELLPVLRARVKEL 218


>gi|238020680|ref|ZP_04601106.1| hypothetical protein GCWU000324_00570 [Kingella oralis ATCC 51147]
 gi|237867660|gb|EEP68666.1| hypothetical protein GCWU000324_00570 [Kingella oralis ATCC 51147]
          Length = 247

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 57/153 (37%), Gaps = 13/153 (8%)

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL 166
              L+++   PS  D  +GK FSG  G ML  ML +I +   Q H S      P  N   
Sbjct: 108 PAKLLVLSVCPSVDDMAAGKLFSGADGEMLHNMLNAIALPPEQAHFSTWLKNSPDFNPRP 167

Query: 167 SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII 226
               +    P I R+ +    + +L +G+                   ++         I
Sbjct: 168 DAQTITAAAPDIAREWQQTRAQAMLLLGDFFHRPEVQAALNAIAPAAARYH--------I 219

Query: 227 PTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
           P     HP  L   P +K++ W  L  L+ ALK
Sbjct: 220 P-----HPMRLAGNPQLKRSAWETLQKLQAALK 247


>gi|218295447|ref|ZP_03496260.1| Uracil-DNA glycosylase superfamily [Thermus aquaticus Y51MC23]
 gi|218244079|gb|EED10605.1| Uracil-DNA glycosylase superfamily [Thermus aquaticus Y51MC23]
          Length = 223

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 57/216 (26%), Gaps = 41/216 (18%)

Query: 74  ACSLHELKSLLRSFHDCHLCSTSL-----------------STICATQTEGQDLMIIGYT 116
           A  L      L   H C                          +         +++ G  
Sbjct: 4   AVDLESFARELVQCHLCPRLVAWREGVAGKRRAFREEAYWARPVPGFGDPKARILLFGLA 63

Query: 117 PSDSD-NISGKPFSGK-TGNMLDKMLQSIE------------IMRTQIHISMISPWHPPG 162
           P     N +G+PF+G  +G  L  +L                +    ++++      PP 
Sbjct: 64  PGAHGANRTGRPFTGDASGAFLYPLLYQAGLASKPESLPGDDLRLHGVYLTAAVRCAPPD 123

Query: 163 NRNLSNIEMEICRPIIMRQIE-LISPKILLFIGNKTKNFF---FNNDAQKTYQNLGKWSN 218
           N   +  E+  C      ++  L   ++ L +G+              +      G+   
Sbjct: 124 N-RPTPEELRTCARWTEVELSLLPELRVFLALGHIAHQALLAHLGLRKRDFPFAHGRVYP 182

Query: 219 LCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
           L         + + H     Q     + T    + +
Sbjct: 183 LE---GGRYLVDSYHVS--RQNTQTGRLTREMFLEV 213


>gi|288940210|ref|YP_003442450.1| Uracil-DNA glycosylase superfamily [Allochromatium vinosum DSM 180]
 gi|288895582|gb|ADC61418.1| Uracil-DNA glycosylase superfamily [Allochromatium vinosum DSM 180]
          Length = 241

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 63/198 (31%), Gaps = 13/198 (6%)

Query: 47  DSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTE 106
            + I P T    + + L    + +  +  +L  L + L +   C         + +  + 
Sbjct: 6   PARISPKTLNHTMTTGLPNTKNELDTRQAALLTLHAELETCCRCP--KMYGPAVHSE-SV 62

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM----RTQIHISMISPWHPPG 162
              +M+IG  P   +    KPF    G  L      + +     R +I +S +    P  
Sbjct: 63  LSPVMLIGQAPGTREIEQLKPFCWTAGKTLFNWFAPLGLDETAFRARILMSAVCRCFPGK 122

Query: 163 NRN-----LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS 217
           N           E+  C      ++EL+ P++LL +G                    +WS
Sbjct: 123 NPKGGDRVPDRDEVARCERWWRGELELLRPRLLLPVGKLAIAQLMPVPRLNDVIGR-QWS 181

Query: 218 NLCTPHSIIPTLATVHPQ 235
                      +   HP 
Sbjct: 182 YRSPEGWEADVIPLPHPS 199


>gi|82702398|ref|YP_411964.1| uracil-DNA glycosylase superfamily protein [Nitrosospira
           multiformis ATCC 25196]
 gi|82410463|gb|ABB74572.1| Uracil-DNA glycosylase superfamily [Nitrosospira multiformis ATCC
           25196]
          Length = 238

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 50/194 (25%), Gaps = 34/194 (17%)

Query: 65  QQADSIAQKACSLHELKSLLRSFHDCHLCST------SLS------TICATQTEGQDLMI 112
           Q+A  + QK            S   C   +       +         + A       L+I
Sbjct: 3   QEARILLQKTPDNSSPVEFSASCRRCPRLAGFLDEVKARHIDYYARPVPAFGDPKPRLLI 62

Query: 113 IGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEI-------------MRTQIHISMISP 157
           IG  P     N +G+PF+G   G +L   L                     Q  I+    
Sbjct: 63  IGLAPGMHGANRTGRPFTGDFAGILLYGTLFKFGFASHEGSASINDNLELMQCRITNAVK 122

Query: 158 WHPPGNRNLSNIEMEICRPIIMRQIELIS---PKILLFIGNKTKNFF---FNNDAQKTYQ 211
             PP N      E+  C   +  +I   +      LL +G               +    
Sbjct: 123 CLPPEN-KPEASEIRQCNSYLAHEISAFAEGGGSALLALGAVAHQAVLMALGLKPKSHAF 181

Query: 212 NLGKWSNLCTPHSI 225
             G    L      
Sbjct: 182 RHGAVHALAGNFGS 195


>gi|89902887|ref|YP_525358.1| uracil-DNA glycosylase superfamily protein [Rhodoferax
           ferrireducens T118]
 gi|89347624|gb|ABD71827.1| Uracil-DNA glycosylase superfamily [Rhodoferax ferrireducens T118]
          Length = 201

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 68/204 (33%), Gaps = 17/204 (8%)

Query: 68  DSIAQKACSLHELKSLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126
                   +L  L + +R+   C          +     E   ++I+G  P    + +G 
Sbjct: 2   AEPEAAYPNLDALLTAVRNCRACESHLPLGPRPVLRAG-EAARILIVGQAPGVRVHTTGI 60

Query: 127 PFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE 183
           P+   +G  L   +   +++    ++I I  +   +P   R         C  + + Q+ 
Sbjct: 61  PWDDPSGERLRAWMGVDKALFYDESRIAIIPMGYCYPGRARGGDLPPRRECAALWLDQLL 120

Query: 184 LISPKI--LLFIGNKTKNFFFNNDAQKTYQNLGK-WSNLCTPHSIIPTLATVHPQELIQY 240
              P+I   L +G   ++ F  +  + +       W            +   HP      
Sbjct: 121 SRMPRIELTLLVGQYAQHHFLGSRRKPSLTETTMAWREYAPRF-----IPLPHPSP-RNQ 174

Query: 241 PLIKKNTW--HALI-TLKKALKNL 261
           P  K++ W    ++  L+  +  +
Sbjct: 175 PWFKQHAWFEEDVVPALQARINAM 198


>gi|312194543|ref|YP_004014604.1| uracil-DNA glycosylase superfamily [Frankia sp. EuI1c]
 gi|311225879|gb|ADP78734.1| Uracil-DNA glycosylase superfamily [Frankia sp. EuI1c]
          Length = 297

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 67/240 (27%), Gaps = 47/240 (19%)

Query: 42  KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI- 100
              +               +       ++A  A    EL +       C         + 
Sbjct: 8   PVAAGTGWPGDPATATTPVALTAGDVVALAGAAGGADELDACASVCRACPRLVDWREEVA 67

Query: 101 -----------------CATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQ 141
                             +       ++++G  P+    N +G+ F+G ++G+ L   L 
Sbjct: 68  RVRRAAYAGERYWGRPMPSFGPPDARVLVVGLAPAAHGGNRTGRIFTGDRSGDWLFAALY 127

Query: 142 S-------------IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP- 187
                                  I+      PP     +  E ++CRP ++R++EL+ P 
Sbjct: 128 RVGLAASPTSTAAGDGQRLLDARITAAVRCAPP-ANKPTPAERDVCRPWLVRELELLRPR 186

Query: 188 -KILLFIGNKTKNFF--------FNNDAQKTYQNLG---KWSNLCTPHSIIPTLATVHPQ 235
            + ++ +G               F    ++     G   +   L    +    L   HP 
Sbjct: 187 LRAIVVLGGFAWQALWPALADAGFGLPPRRPAFGHGARVELPALAGAPAGPLLLGCYHPS 246


>gi|262392952|ref|YP_003284806.1| uracil-DNA glycosylase [Vibrio sp. Ex25]
 gi|262336546|gb|ACY50341.1| uracil-DNA glycosylase [Vibrio sp. Ex25]
          Length = 190

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 71/181 (39%), Gaps = 17/181 (9%)

Query: 76  SLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
           SL  L   +R+   C  +L   +   + A   +G  ++IIG  P    + +  P++  +G
Sbjct: 2   SLETLLQQVRACQICADNLPLGANPVVQA--AKGARILIIGQAPGTRVHKTSIPWNDPSG 59

Query: 134 NMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--K 188
           + L + L     +     +I I  +   +P    +      + C P   R+I    P  +
Sbjct: 60  DRLRQWLDIDKDVFYDPNKIAIVPMGFCYPGKGNSGDLPPRKECAPTWHRKILEQLPNIE 119

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247
           + L IG  ++ ++  N  +   Q + +W +          +   HP    +  L  KKN 
Sbjct: 120 LTLLIGQYSQQYYLTNKPKTLTQTVQQWQDWEPDF-----IPLPHPSP--RNTLWLKKNP 172

Query: 248 W 248
           W
Sbjct: 173 W 173


>gi|325673716|ref|ZP_08153407.1| uracil-DNA glycosylase [Rhodococcus equi ATCC 33707]
 gi|325555737|gb|EGD25408.1| uracil-DNA glycosylase [Rhodococcus equi ATCC 33707]
          Length = 290

 Score = 65.5 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/240 (11%), Positives = 63/240 (26%), Gaps = 45/240 (18%)

Query: 40  QRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL-- 97
                          + +   +       ++A  A +L ++ + +     C         
Sbjct: 16  PSPVPPGTGWPGDPADEQTPVAHSAADVVALAADAKNLLDIDARISVCRACPRLVEWRER 75

Query: 98  ----------------STICATQTEGQDLMIIGYTPSDS-DNISGKPFSGK-TGNMLDKM 139
                             +     +   L+I+G  P+ +  N +G+ F+G   G+ L + 
Sbjct: 76  AAETKRASFANQPYWGRPVTGFGGDFAKLLIMGLAPAANGGNRTGRMFTGDQAGDWLFRA 135

Query: 140 LQS-------------IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186
           L                      + +       PP N   S  E + C   +  +   + 
Sbjct: 136 LHRAGLATRAEVDHAGDGQKLFGVRMLSAVRCAPPEN-KPSIEERDCCAGWLDAEFARLL 194

Query: 187 P--KILLFIGNKTKNFFFN--------NDAQKTYQNLGKWSN-LCTPHSIIPTLATVHPQ 235
           P  + ++ +G    +                K     G+ +         +  +   HP 
Sbjct: 195 PFARAVVALGAFGWDATLGAVRRSGGTVPTPKPKFGHGQIAVLHTADGKPLNVIGCYHPS 254


>gi|77918350|ref|YP_356165.1| putative uracil-DNA glycosylase [Pelobacter carbinolicus DSM 2380]
 gi|77544433|gb|ABA87995.1| putative uracil-DNA glycosylase [Pelobacter carbinolicus DSM 2380]
          Length = 224

 Score = 65.5 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 54/189 (28%), Gaps = 38/189 (20%)

Query: 82  SLLRSFHDC----------------HLCSTSLSTICATQTEGQDLMIIGYTPSDSD-NIS 124
             + S   C                         +         + ++G  P     N +
Sbjct: 7   ENIASCRRCQRLVDYIADLPPAKGRRRSEYWNRPVPGFGDLQARIFLVGLAPGAHGANRT 66

Query: 125 GKPFSGK-TGNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIE 170
           G+PF+G   G+ +  +L                      ++IS      PP N      E
Sbjct: 67  GRPFTGDGAGDFMYPLLHEAGFASQAEAVSSDDGLELYDLYISNAVKCVPPQN-KPLAAE 125

Query: 171 MEICRPIIMRQIEL-ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP-----HS 224
             +CRP +  +++   + K+++ +G    + +     ++ +                   
Sbjct: 126 FHLCRPFLTAELKRLTNLKVVVALGRAAFDSYMRLCVEQGHIQRMAEFPFAHGASYLLPH 185

Query: 225 IIPTLATVH 233
            I  +A  H
Sbjct: 186 GIWVVACYH 194


>gi|260428760|ref|ZP_05782737.1| conserved hypothetical protein [Citreicella sp. SE45]
 gi|260419383|gb|EEX12636.1| conserved hypothetical protein [Citreicella sp. SE45]
          Length = 198

 Score = 65.2 bits (157), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 61/204 (29%), Gaps = 29/204 (14%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSL------STICATQTEGQDLMIIGYTPSDSDNISGKPF 128
            +L +L + L     C     +         +      G  L+I G  P    +  G+PF
Sbjct: 3   DTLDDLSTRLSDCRLCADRFAATATRHAPRPVVWF-DRGARLLIAGQAPGLKVHERGRPF 61

Query: 129 SGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRN-----LSNIEMEICRPIIMR 180
              +G  L   L   ++    R++I I  ++   P  +          +        +  
Sbjct: 62  DDPSGTRLRDWLGLSEAQFWDRSRIAIVPMAFCFPGYDAKGADLPPPPLCRATWHDALFE 121

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
            +  I  ++ +  G     +        T    G W +          +   HP    + 
Sbjct: 122 ALGEIRLRVYV--GGYAHRYHLGARTGVTETVRG-WRDHLPD-----AIPLPHPSW--RN 171

Query: 241 PLI-KKNTW-HA--LITLKKALKN 260
               K+N W     L  L+  ++ 
Sbjct: 172 TAWLKRNPWFADELLPVLRARVRE 195


>gi|329940848|ref|ZP_08290128.1| Uracil-DNA glycosylase, family 5 [Streptomyces griseoaurantiacus
           M045]
 gi|329300142|gb|EGG44040.1| Uracil-DNA glycosylase, family 5 [Streptomyces griseoaurantiacus
           M045]
          Length = 274

 Score = 65.2 bits (157), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 53/161 (32%), Gaps = 36/161 (22%)

Query: 77  LHELKSLLRSFHDCHL------------------CSTSLSTICATQTEGQDLMIIGYTPS 118
           L EL   +     C                     +     +         L+I+G  P+
Sbjct: 22  LEELDERIAGCRACPRLVAWREEVARTRRAAFADWTYWGRPVPGFGPPDASLLILGLAPA 81

Query: 119 DS-DNISGKPFSG-KTGNMLDKMLQS-------------IEIMRTQIHISMISPWHPPGN 163
               N +G+ F+G ++G++L   L                 +    + I+      PP  
Sbjct: 82  AHGGNRTGRMFTGDRSGDVLYAALHEVGLASQARAERIGDGLELYGVRITSPVHCAPP-A 140

Query: 164 RNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFF 202
              +  E + CRP ++R++ L+ P  + ++ +G        
Sbjct: 141 NKPTPGERDTCRPWLVRELTLLRPSLRAVVVLGAFGWQAAL 181


>gi|329947528|ref|ZP_08294720.1| uracil-DNA glycosylase, family 4 [Actinomyces sp. oral taxon 170
           str. F0386]
 gi|328524218|gb|EGF51291.1| uracil-DNA glycosylase, family 4 [Actinomyces sp. oral taxon 170
           str. F0386]
          Length = 278

 Score = 65.2 bits (157), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/238 (12%), Positives = 60/238 (25%), Gaps = 45/238 (18%)

Query: 42  KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL---- 97
                              +        +A  +  L  L + +     C    T      
Sbjct: 15  PVPPGTGWPDDPATATTPMARSAADVARLAGASSDLPALDARITVCRACDRLVTWREEVA 74

Query: 98  ---------------STICATQTEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKML 140
                            + +       + ++G  P+ +  N +G+ F+G ++G+ L    
Sbjct: 75  RSGRRASFSHEPYWGRPVASVGAADARIYVVGLAPAANGANRTGRMFTGDRSGDWLWAAF 134

Query: 141 QS-------------IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE-LIS 186
                               T   +       PP     + +E   C P + R+I  +  
Sbjct: 135 YRAGLATSPTSTAAGDGQRLTGARMGAAVRCAPP-ANKPTTVERTTCAPWLAREIALMPE 193

Query: 187 PKILLFIGNKTKNFFF--------NNDAQKTYQNLGKWSNL-CTPHSIIPTLATVHPQ 235
            K+LL +G                     +     G  + L       +  L + HP 
Sbjct: 194 VKVLLALGGIGWGAALRVTREAGWTLPRPQPRFGHGATAELTRPDGRPVTLLGSYHPS 251


>gi|28899689|ref|NP_799294.1| hypothetical protein VP2915 [Vibrio parahaemolyticus RIMD 2210633]
 gi|153838909|ref|ZP_01991576.1| uracil DNA glycosylase superfamily [Vibrio parahaemolyticus AQ3810]
 gi|260878157|ref|ZP_05890512.1| uracil DNA glycosylase superfamily [Vibrio parahaemolyticus
           AN-5034]
 gi|260897880|ref|ZP_05906376.1| uracil DNA glycosylase superfamily [Vibrio parahaemolyticus
           Peru-466]
 gi|260902145|ref|ZP_05910540.1| uracil DNA glycosylase superfamily [Vibrio parahaemolyticus AQ4037]
 gi|28807941|dbj|BAC61178.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149747617|gb|EDM58541.1| uracil DNA glycosylase superfamily [Vibrio parahaemolyticus AQ3810]
 gi|308085544|gb|EFO35239.1| uracil DNA glycosylase superfamily [Vibrio parahaemolyticus
           Peru-466]
 gi|308090241|gb|EFO39936.1| uracil DNA glycosylase superfamily [Vibrio parahaemolyticus
           AN-5034]
 gi|308110160|gb|EFO47700.1| uracil DNA glycosylase superfamily [Vibrio parahaemolyticus AQ4037]
          Length = 190

 Score = 65.2 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 69/181 (38%), Gaps = 17/181 (9%)

Query: 76  SLHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
           SL  L   +R+   C   L   + + +     +   ++IIG  P    + +  P++  +G
Sbjct: 2   SLENLLQQVRACQICAESLPLGA-NPVVQAG-KNARILIIGQAPGTKVHSTSIPWNDPSG 59

Query: 134 NMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--K 188
           + L + L     +     +I I  +   +P    +      + C P   ++I    P  +
Sbjct: 60  DRLRQWLDIDKDVFYDPNKIAIVPMGFCYPGKGNSGDLPPRKECAPTWHKKILEQLPNIE 119

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247
           + L IG  ++ ++  N  +   Q + +W +          +   HP    +  L  KKN 
Sbjct: 120 LTLLIGQFSQQYYLTNKPKTLTQTVQQWQDWEPEF-----IPLPHPSP--RNTLWLKKNP 172

Query: 248 W 248
           W
Sbjct: 173 W 173


>gi|313902356|ref|ZP_07835760.1| Uracil-DNA glycosylase superfamily [Thermaerobacter subterraneus
           DSM 13965]
 gi|313467404|gb|EFR62914.1| Uracil-DNA glycosylase superfamily [Thermaerobacter subterraneus
           DSM 13965]
          Length = 320

 Score = 64.8 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 60/187 (32%), Gaps = 36/187 (19%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHL------------------ 92
           QP T       P      +    A ++  +   + +   C                    
Sbjct: 7   QPGTVPAAAAVPPCDPVAAAGDAAAAIARIHQDIVACRRCPRLVAYTAQVARTRRRAYRD 66

Query: 93  CSTSLSTICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK-TGNMLDKML---------- 140
                  +         L+++G  P+    N +G+ F+G  +G+ L + L          
Sbjct: 67  WDYWGRPVPGFGDPQARLLVVGLAPAAHGANRTGRMFTGDSSGDWLYRALYRAGFASQPT 126

Query: 141 ---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGN 195
              +   +     +I+      PP N   S  E+  C   + R+++++ P  ++++ +G 
Sbjct: 127 ATHRDDGLRLHGAYITAACRCAPPDN-KPSREELAACSAFLRRELDVLWPGVRVIVCLGQ 185

Query: 196 KTKNFFF 202
              +   
Sbjct: 186 IAFDAVL 192


>gi|114797491|ref|YP_761471.1| uracil-DNA glycosylase family protein [Hyphomonas neptunium ATCC
           15444]
 gi|114737665|gb|ABI75790.1| uracil-DNA glycosylase family protein [Hyphomonas neptunium ATCC
           15444]
          Length = 219

 Score = 64.8 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 58/186 (31%), Gaps = 33/186 (17%)

Query: 81  KSLLRSFHDCHLCST---------SLST------ICATQTEGQDLMIIGYTPSDSD-NIS 124
            +   +  DC LC           +         + +   +   L+I+G  P  +  N +
Sbjct: 6   AAAPEAPRDCPLCPRLVAYREAVRAKEPSWFNGAVPSFGKDDAQLLIVGLAPGVTGANRT 65

Query: 125 GKPFSGK-TGNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSNIE 170
           G+PF+G   G++L   L      + +               I+      PP N+ +    
Sbjct: 66  GRPFTGDWAGDLLYATLDKFGFSKGKFAADPNDGLVLTGAMITNAVRCVPPENKPVGAEI 125

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSNLCTPHSIIP 227
            +    +  R   L   K++L +G  + +                 G    +      + 
Sbjct: 126 NQCRPFLEARIAALPKLKVILCLGKISHDSTLRALGLKVAAHPFGHGTKYEVEANGKPVT 185

Query: 228 TLATVH 233
            L++ H
Sbjct: 186 LLSSYH 191


>gi|254460579|ref|ZP_05073995.1| uracil-DNA glycosylase superfamily [Rhodobacterales bacterium
           HTCC2083]
 gi|206677168|gb|EDZ41655.1| uracil-DNA glycosylase superfamily [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 197

 Score = 64.8 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 69/203 (33%), Gaps = 31/203 (15%)

Query: 81  KSLLRSFHDCHLC-----STSLSTIC------ATQTEGQDLMIIGYTPSDSDNISGKPFS 129
           K+LL+    C LC      T+           +       ++I G  P    + SG+PF+
Sbjct: 2   KALLQDITKCQLCADRFAKTATQHAPRPVLWVSANGVKSRILIAGQAPGARVHESGRPFT 61

Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQI 182
             +G+ L   L   ++    R+++ I+ ++   P     G+               +   
Sbjct: 62  DPSGDRLRDWLGLDEATFYDRSKLAIAPMAFCFPGYNAKGSDLPPPAICAKSWRRPLMDA 121

Query: 183 ELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL 242
               P + L IG+    +      + T   + +W +              HP    +   
Sbjct: 122 LGPMP-LTLLIGSYAMKWHLGGAPKVTQTVM-EWQSHAPS-----VFPLPHPSW--RNTA 172

Query: 243 I-KKNTW--HALI-TLKKALKNL 261
             KKN W    L+  L+  ++ +
Sbjct: 173 WLKKNPWFEADLLPVLRARVQEV 195


>gi|298290884|ref|YP_003692823.1| hypothetical protein Snov_0880 [Starkeya novella DSM 506]
 gi|296927395|gb|ADH88204.1| conserved hypothetical protein [Starkeya novella DSM 506]
          Length = 211

 Score = 64.8 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 51/195 (26%), Gaps = 22/195 (11%)

Query: 73  KACSLHELKSLLRSFHDC---HLCS---TSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126
            + +L  + + +R+   C    L          +         ++I G  P    + SG+
Sbjct: 2   PSDTLDAVLAEIRACRVCVEHPLGKPLPHEPRPVLHVG-PRSRILIAGQAPGTKVHASGR 60

Query: 127 PFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRN--LSNIEMEICRPIIMRQ 181
            F   +G  L   L           +I I+ +    P  +          E       R 
Sbjct: 61  SFDDASGKRLRDWLGIDADTFYDAERISIAAMGFCFPGQDAKGGDLPPRRECASLWHDRL 120

Query: 182 IELISPKILLFIGNKTKNF-FFNNDAQKTYQNLG------KWSNLCTPHSIIPTLATVHP 234
                P  L+                 + +   G      +W  +         +   HP
Sbjct: 121 FAARKPFELVVAVGAASQAYHLKRLGLERFAAGGLTERVERWREIWDARETPRIVPLPHP 180

Query: 235 QELIQYPLI-KKNTW 248
               +     K++ W
Sbjct: 181 SW--RNTGWLKRHPW 193


>gi|302561216|ref|ZP_07313558.1| uracil-DNA glycosylase, family 4 [Streptomyces griseoflavus Tu4000]
 gi|302478834|gb|EFL41927.1| uracil-DNA glycosylase, family 4 [Streptomyces griseoflavus Tu4000]
          Length = 238

 Score = 64.8 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 65/224 (29%), Gaps = 47/224 (20%)

Query: 77  LHELKSLLRSFHDCHL------------------CSTSLSTICATQTEGQDLMIIGYTPS 118
           L  L   +     C                     +     +         L+IIG  P+
Sbjct: 6   LDRLDQRIAGCRACPRLVEWREEVARTKRAAFADWTYWGRPVPGFGPPDARLLIIGLAPA 65

Query: 119 DS-DNISGKPFSG-KTGNMLDKMLQS-------------IEIMRTQIHISMISPWHPPGN 163
               N +G+ F+G ++G++L + L                 +    + ++      PP  
Sbjct: 66  AHGGNRTGRMFTGDRSGDVLYRALYDVGLASRPTSVHAGDGLELYGVRVTSPVHCAPP-A 124

Query: 164 RNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFF--------NNDAQKTYQNL 213
              +  E + CRP ++R++ L+ P  +  L +G                     +     
Sbjct: 125 NRPTPEERDACRPWLVRELNLLRPTVRAALVLGAFGWQAALPAFAEAGWTVPRPRPAFAH 184

Query: 214 GKWSNLCTPHS-IIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
           G    L  P    +      H  +  +     + T   L  + +
Sbjct: 185 GAHVTLDAPDGPGLHLFGCFHVSQ--RNTFTGRLTPEMLREVLR 226


>gi|313680614|ref|YP_004058353.1| uracil-DNA glycosylase superfamily [Oceanithermus profundus DSM
           14977]
 gi|313153329|gb|ADR37180.1| Uracil-DNA glycosylase superfamily [Oceanithermus profundus DSM
           14977]
          Length = 228

 Score = 64.8 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 50/195 (25%), Gaps = 35/195 (17%)

Query: 73  KACSLHELKSLLRSFHDCHL---------CSTSL---------STICATQTEGQDLMIIG 114
               L +L   L +   C                           +         L+I G
Sbjct: 5   TPERLEDLYRELAACRRCERLVAWREEVGRKKRRAFRAETYWARPVPGFGDPNARLLIFG 64

Query: 115 YTPSDSD-NISGKPFSGK-TGNMLDKMLQS-------------IEIMRTQIHISMISPWH 159
             P     N +G+ F+G  +G+ L   L                 +     +I+      
Sbjct: 65  LAPGAHGSNRTGRMFTGDASGDFLYPALWRAGLASRPRSERPGDGLELRGAYITAAVRCA 124

Query: 160 PPGNRNLSNIEMEICRPIIMRQIE-LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218
           PPGN   +  E   C     R++  L   ++ L +G    +    +      +       
Sbjct: 125 PPGN-KPTRAEFAACSAWTARELALLPELRVYLALGRLAHDALLEHHGLVKARFPFAHGA 183

Query: 219 LCTPHSIIPTLATVH 233
                     L + H
Sbjct: 184 EHALPDGRVLLDSYH 198


>gi|323475799|gb|ADX86405.1| uracil-DNA glycosylase superfamily [Sulfolobus islandicus REY15A]
          Length = 222

 Score = 64.8 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 70/217 (32%), Gaps = 35/217 (16%)

Query: 77  LHELKSLLRSFHDCHLC---------STSLSTICATQTEGQDLMIIGYTPSDS-DNISGK 126
           +    S L S + C            +     +        +++IIG  P+ +  N +G+
Sbjct: 1   MENFISRLISCNKCPRLTQYRNSFPDNYWKKPVPPNGEINAEIVIIGLAPAANGGNRTGR 60

Query: 127 PFSG-KTGNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSNIEME 172
            F+G ++ N L   L ++                    +I+      PP N   +  E+ 
Sbjct: 61  MFTGDESSNNLTNALYAVGFANQPFSISKDDGLKVFRVYITSAVKCAPPQN-KPNKDEII 119

Query: 173 ICRPIIMRQIEL-ISPKILLFIGNKTKNFF------FNNDAQKTYQNLGKWSNLCTPH-S 224
            C   +  ++ +  + K+ +  G    +                    G    +  P  S
Sbjct: 120 NCSTFLEEEVRMLENAKVYIAFGKVAWDSIIYVFKKIGYSVPNVKFYHGALVKVTKPDMS 179

Query: 225 IIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
           II  + + HP    +     + T + L+ +    K L
Sbjct: 180 IIWLIGSYHPSP--RNMKTGRLTMNMLVEIFSTAKKL 214


>gi|227828817|ref|YP_002830597.1| uracil-DNA glycosylase superfamily [Sulfolobus islandicus M.14.25]
 gi|227831550|ref|YP_002833330.1| Uracil-DNA glycosylase superfamily [Sulfolobus islandicus L.S.2.15]
 gi|229580503|ref|YP_002838903.1| Uracil-DNA glycosylase superfamily [Sulfolobus islandicus
           Y.G.57.14]
 gi|229580849|ref|YP_002839248.1| Uracil-DNA glycosylase superfamily [Sulfolobus islandicus
           Y.N.15.51]
 gi|229586024|ref|YP_002844526.1| Uracil-DNA glycosylase superfamily [Sulfolobus islandicus M.16.27]
 gi|238621009|ref|YP_002915835.1| Uracil-DNA glycosylase superfamily [Sulfolobus islandicus M.16.4]
 gi|284999102|ref|YP_003420870.1| Uracil-DNA glycosylase superfamily [Sulfolobus islandicus L.D.8.5]
 gi|227457998|gb|ACP36685.1| Uracil-DNA glycosylase superfamily [Sulfolobus islandicus L.S.2.15]
 gi|227460613|gb|ACP39299.1| Uracil-DNA glycosylase superfamily [Sulfolobus islandicus M.14.25]
 gi|228011219|gb|ACP46981.1| Uracil-DNA glycosylase superfamily [Sulfolobus islandicus
           Y.G.57.14]
 gi|228011565|gb|ACP47326.1| Uracil-DNA glycosylase superfamily [Sulfolobus islandicus
           Y.N.15.51]
 gi|228021074|gb|ACP56481.1| Uracil-DNA glycosylase superfamily [Sulfolobus islandicus M.16.27]
 gi|238382079|gb|ACR43167.1| Uracil-DNA glycosylase superfamily [Sulfolobus islandicus M.16.4]
 gi|284446998|gb|ADB88500.1| Uracil-DNA glycosylase superfamily [Sulfolobus islandicus L.D.8.5]
          Length = 222

 Score = 64.8 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 70/217 (32%), Gaps = 35/217 (16%)

Query: 77  LHELKSLLRSFHDCHLC---------STSLSTICATQTEGQDLMIIGYTPSDS-DNISGK 126
           +    S L S + C            +     +        +++IIG  P+ +  N +G+
Sbjct: 1   MENFISRLISCNKCPRLTQYRNSFPDNYWKKPVPPNGEINAEIVIIGLAPAANGGNRTGR 60

Query: 127 PFSG-KTGNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSNIEME 172
            F+G ++ N L   L ++                    +I+      PP N   +  E+ 
Sbjct: 61  MFTGDESSNNLTNALYAVGFANQPFSISKDDGLKLFRVYITSAVKCAPPQN-KPNKDEII 119

Query: 173 ICRPIIMRQIEL-ISPKILLFIGNKTKNFF------FNNDAQKTYQNLGKWSNLCTPH-S 224
            C   +  ++ +  + K+ +  G    +                    G    +  P  S
Sbjct: 120 NCSTFLEEEVRMLENAKVYIAFGKVAWDSIIYVFKKIGYSVPNVKFYHGALVKVTKPDMS 179

Query: 225 IIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
           II  + + HP    +     + T + L+ +    K L
Sbjct: 180 IIWLIGSYHPSP--RNMKTGRLTMNMLVEIFSTAKKL 214


>gi|257051271|ref|YP_003129104.1| Uracil-DNA glycosylase superfamily [Halorhabdus utahensis DSM
           12940]
 gi|256690034|gb|ACV10371.1| Uracil-DNA glycosylase superfamily [Halorhabdus utahensis DSM
           12940]
          Length = 210

 Score = 64.8 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/164 (13%), Positives = 59/164 (35%), Gaps = 15/164 (9%)

Query: 85  RSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG-KTGNMLDKMLQS 142
               +C  L  +    +        D++++G  P+   + +G PF+G +TG  + ++L +
Sbjct: 16  EDCTNCPALVESRTQVVHGYGDPTADVIVLGSAPTPGADRTGIPFTGDETGETIQEILGA 75

Query: 143 IEI----------MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192
           + +            T+++++ ++  H          E   C      ++  I+P++++ 
Sbjct: 76  VGLSDSPPDTTEPDLTEVYLTYVTRCHHSDRSAT-EEERHNCEGYRTAELRRINPELIVA 134

Query: 193 IGNKTKNFFFNNDAQKTYQNL--GKWSNLCTPHSIIPTLATVHP 234
           +G +           ++   L                 L  + P
Sbjct: 135 VGQEPLEALAFEYTMESADELDVTAEHATTIQGRGFEILPMIEP 178


>gi|330813529|ref|YP_004357768.1| uracil-DNA glycosylase, family 5 [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327486624|gb|AEA81029.1| uracil-DNA glycosylase, family 5 [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 226

 Score = 64.4 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 57/196 (29%), Gaps = 40/196 (20%)

Query: 76  SLHELKSLLRSFHDCHL---------CSTSLS---------TICATQTEGQDLMIIGYTP 117
           SL  L   + +   C                                 +   ++I G  P
Sbjct: 4   SLDNLNQTITNCSKCPRLVAFRKKISKEKRKQYRNQIYWGKPTPGFGDKKSKIIIFGLAP 63

Query: 118 SDSD-NISGKPFSGKT-GNMLDKMLQSIEIMRT------------QIHISMISPWHPPGN 163
           +      +G+ F+G   G++L K L    +                  I+ +    PPG+
Sbjct: 64  AAHGATRTGRVFTGDKSGDLLFKCLYKAGLSNQSTSTDINDGLKLSCFITNVLKCVPPGD 123

Query: 164 RNLSNIEMEICRPIIMRQIELIS-PKILLFIGNKTKNFFFNNDAQKTY-----QNLGKWS 217
                 E+  C   +  ++ ++   KIL+ IG    +       +K          G   
Sbjct: 124 -KPELKELLNCSKFLEGELHILREAKILVTIGKVAFDEILKFYQRKYSLDKKNYIFGHGK 182

Query: 218 NLCTPHSIIPTLATVH 233
               P   +  +++ H
Sbjct: 183 KYKLPDGKL-LVSSYH 197


>gi|284164858|ref|YP_003403137.1| uracil-DNA glycosylase-like protein [Haloterrigena turkmenica DSM
           5511]
 gi|284014513|gb|ADB60464.1| Uracil-DNA glycosylase-like protein [Haloterrigena turkmenica DSM
           5511]
          Length = 220

 Score = 64.4 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 59/174 (33%), Gaps = 25/174 (14%)

Query: 85  RSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN--------- 134
               +C  LC T    +        D + +G  P+ S +  G PF+  T +         
Sbjct: 16  EECRNCPALCETRTQVVHGYGDVDADFLFVGERPTASADAIGVPFAAGTEDGTAADGAES 75

Query: 135 --MLDKMLQSIEIM----------RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQI 182
              L +ML+ + +              ++++ ++    P     ++ E+  C P +  +I
Sbjct: 76  ETTLRRMLERLGLCDATSPADEPVLENVYLTNLTRCRDPDR-RPTDEEIGNCDPYLNAEI 134

Query: 183 ELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKW--SNLCTPHSIIPTLATVHP 234
            +I+P+IL+ +G +               +L                 +  V P
Sbjct: 135 RMINPEILVPVGERPLRELGVEYTTTPADDLALPDDHARRIRGRGFELVPMVDP 188


>gi|239931906|ref|ZP_04688859.1| hypothetical protein SghaA1_27039 [Streptomyces ghanaensis ATCC
           14672]
 gi|291440276|ref|ZP_06579666.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
 gi|291343171|gb|EFE70127.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
          Length = 242

 Score = 64.4 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 59/201 (29%), Gaps = 45/201 (22%)

Query: 77  LHELKSLLRSFHDCHL------------------CSTSLSTICATQTEGQDLMIIGYTPS 118
           L EL   +     C                     +     +         L+IIG  P+
Sbjct: 6   LTELDRRIADCRACPRLVDWREEVARTRRAAFADWTYWGRPVPGFGPPDARLLIIGLAPA 65

Query: 119 DS-DNISGKPFSG-KTGNMLDKMLQS-------------IEIMRTQIHISMISPWHPPGN 163
               N +G+ F+G ++G++L + L                 +    + ++      PP  
Sbjct: 66  AHGGNRTGRMFTGDRSGDVLYRALYDVGLASQPSSVHAGDGLELHGVRVTAPVHCAPP-A 124

Query: 164 RNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLC 220
              +  E + CRP +++++ L+ P  +  L +G                     + +   
Sbjct: 125 NKPTPEERDTCRPWLVQELHLLRPTVRAALVLGAFGWQAALPAFAGAGWTVPRPRPAFKH 184

Query: 221 TPHSIIP--------TLATVH 233
             H  +P             H
Sbjct: 185 GAHVTLPAADGPGLHLFGCYH 205


>gi|295681381|ref|YP_003609955.1| uracil-DNA glycosylase [Burkholderia sp. CCGE1002]
 gi|295441276|gb|ADG20444.1| Uracil-DNA glycosylase superfamily [Burkholderia sp. CCGE1002]
          Length = 208

 Score = 64.4 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 63/194 (32%), Gaps = 17/194 (8%)

Query: 66  QADSIAQKACSLHELKSLLRSFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNIS 124
                ++   SL  L   +R+   C      +   + A  +    ++IIG  P    + S
Sbjct: 4   TTKRTSKHDTSLDTLLHDIRACTLCAPTLPHAPRPVLAA-STRSRILIIGQAPGARVHAS 62

Query: 125 GKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ 181
           G P+S  +G  L   L    +     ++  I  +    P    +        C     R+
Sbjct: 63  GVPWSDASGARLRTWLGVDDTTFYDASRFAIVPMGFCFPGRGASGDLPPRPECASRWHRE 122

Query: 182 I--ELISPKILLFIGNKTKNFFFNN-DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238
           +   + S K+ L IG   + F   +     +   L +W+           +   HP    
Sbjct: 123 LLARMRSVKLTLLIGQYAQRFGLGDAFGPTSTDTLVRWAEF-----GPRVMPLPHPSP-- 175

Query: 239 QYPLI-KKNTW-HA 250
           +     K+N W   
Sbjct: 176 RNVAWFKRNPWFED 189


>gi|90022415|ref|YP_528242.1| 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR)
           carboxylase [Saccharophagus degradans 2-40]
 gi|89952015|gb|ABD82030.1| Uracil-DNA glycosylase superfamily [Saccharophagus degradans 2-40]
          Length = 194

 Score = 64.4 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 58/185 (31%), Gaps = 19/185 (10%)

Query: 80  LKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
           L + +R   DC   L   +   +         ++IIG  P    + SG P+   +G  L 
Sbjct: 11  LINQIRQCRDCEPELPLGARPIV--RGAPNAKILIIGQAPGTKVHASGIPWDDASGRRLR 68

Query: 138 KML---QSIEIMRTQIHISMISPWHPPGNR--NLSNIEMEICRPIIMRQIELISPKILLF 192
           + +          ++I I  +   +P   R  +L        +        L + ++ L 
Sbjct: 69  QWMGIDDQAFYDESRIAIMPMGFCYPGKGRSGDLPPRPECAPKWHARMLASLPNIQLTLL 128

Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNT 247
           IG   + ++           +  W +    +         HP       L Q P  ++  
Sbjct: 129 IGQYAQKYYLKEGFTNLTDTVKHWEDYLPHY-----FPLPHPSPRNQIWLKQNPWFEEIA 183

Query: 248 WHALI 252
              L 
Sbjct: 184 IPELQ 188


>gi|218461847|ref|ZP_03501938.1| probable uracil-DNA glycosylase protein [Rhizobium etli Kim 5]
          Length = 210

 Score = 64.4 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 64/192 (33%), Gaps = 22/192 (11%)

Query: 75  CSLHELKSLLRSFHDC---------HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISG 125
            SL  L+  + +   C         H        + A  +    ++I G  P    + SG
Sbjct: 5   ASLETLRREIAACRICRDAPANGPAHRLPHEPRPV-AVISSNAHILIAGQAPGLRVHESG 63

Query: 126 KPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSN-IEMEICRPIIMRQ 181
            PF   +G+ L   L   ++    R +  I  +    P  +   ++      C P   ++
Sbjct: 64  LPFDDASGDRLRSWLGVDRASFYDRDRFAIVPMGFCFPGYDDKGADLPPRRECAPFWRQR 123

Query: 182 IELISPKI--LLFIGNKTKNFFFN--NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237
           +    P+I  +L IG   + +     +    T    G W +          L   HP   
Sbjct: 124 VLSAMPQIELVLVIGQYAQTWHIAGESRGGMTETVRG-WRDSLMSGRSPAVLPLPHPSW- 181

Query: 238 IQYPLI-KKNTW 248
            +     K+N+W
Sbjct: 182 -RNSGWLKRNSW 192


>gi|325983076|ref|YP_004295478.1| Uracil-DNA glycosylase superfamily [Nitrosomonas sp. AL212]
 gi|325532595|gb|ADZ27316.1| Uracil-DNA glycosylase superfamily [Nitrosomonas sp. AL212]
          Length = 224

 Score = 64.0 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 57/211 (27%), Gaps = 37/211 (17%)

Query: 82  SLLRSFHDCH-LC-----------STSLSTICATQTEGQDLMIIGYTPSDSD-NISGKPF 128
             + S   C  LC                 + A       L+I+G  P     N +G+PF
Sbjct: 11  QAILSCRQCPRLCGFLQAVKDQHPDYHARPVIAFGEAMPKLLIVGLAPGMHGANRTGRPF 70

Query: 129 SGKT-GNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC 174
           +G   G +L + L                 +      I+      PP N      E++ C
Sbjct: 71  TGDYAGILLYQTLHRFGLATRNDSISADDGLRLMGCRITNAVKCLPPEN-KPIPQEIKQC 129

Query: 175 RPIIMRQIELISPK---ILLFIGNKTKNFF---FNNDAQKTYQNLGKWSNLC-TPHSIIP 227
              +  +I          +L +G              A+      G    +  +  + + 
Sbjct: 130 NQYLSIEINQFIKSGGIAVLALGTVAHQAVLMSLQLKAKDYPFAHGAVHAVPSSSGNGLR 189

Query: 228 TLATVHPQELIQYPLIKKNTWHALITLKKAL 258
              + H          K+ T      +   +
Sbjct: 190 LYDSYHCS--RYNTQTKRLTAEMFAQVFAQI 218


>gi|108757455|ref|YP_632184.1| hypothetical protein MXAN_4004 [Myxococcus xanthus DK 1622]
 gi|108461335|gb|ABF86520.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
          Length = 377

 Score = 64.0 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/176 (14%), Positives = 62/176 (35%), Gaps = 17/176 (9%)

Query: 95  TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISM 154
            +  +      E   L+++G +P    +I+  PF+G  G +L+ +L    + R+   +  
Sbjct: 195 AASHSHPRAGAERASLLLVGASP---VDIAEPPFAGSAGALLEVVLGRAGLTRSSRRVVR 251

Query: 155 IS----PWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210
                           +  E   CR  +   +  + P++++ +G      F      + +
Sbjct: 252 PCGDGCRSRHGVLPPTARGEGRTCRHGLEGVVAEVRPRMIIALGPVAAQAFLGV-GFRMH 310

Query: 211 QNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT------WHALITLKKALKN 260
            + G+  +          +AT  P+ +++ P  +            L +    L+ 
Sbjct: 311 LSRGQLLDTRWAEG---WMATFDPEAVLRLPEGRARAEARIHFEADLRSAAAWLRQ 363


>gi|323478627|gb|ADX83865.1| Uracil-DNA glycosylase superfamily [Sulfolobus islandicus HVE10/4]
          Length = 222

 Score = 64.0 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 70/217 (32%), Gaps = 35/217 (16%)

Query: 77  LHELKSLLRSFHDCHLC---------STSLSTICATQTEGQDLMIIGYTPSDS-DNISGK 126
           +    S L S + C            +     +        +++IIG  P+ +  N +G+
Sbjct: 1   MENFISRLISCNKCPRLTQYRNSFPDNYWKKPVPPNGEINAEIVIIGLAPAANGGNRTGR 60

Query: 127 PFSG-KTGNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSNIEME 172
            F+G ++ N L   L ++                    +I+      PP N   +  E+ 
Sbjct: 61  MFTGDESSNNLTNALYAVGFANQPFSISKDDGLKLFRVYITSAVKCAPPQN-KPNKDEII 119

Query: 173 ICRPIIMRQIEL-ISPKILLFIGNKTKNFF------FNNDAQKTYQNLGKWSNLCTPH-S 224
            C   +  ++ +  + K+ +  G    +                    G    +  P  S
Sbjct: 120 NCSTFLEEEVRILENAKVYIAFGKVAWDSIIYVFKKIGYSVPNVKFYHGALVKVTKPDMS 179

Query: 225 IIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
           II  + + HP    +     + T + L+ +    K L
Sbjct: 180 IIWLIGSYHPSP--RNMKTGRLTMNMLVEIFSTAKKL 214


>gi|290559867|gb|EFD93190.1| phage SPO1 DNA polymerase-related protein [Candidatus Parvarchaeum
           acidophilus ARMAN-5]
          Length = 106

 Score = 64.0 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 1/93 (1%)

Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT 228
            E+E CRP ++RQ+  I+P I+L  G  +         +   +  G+  N+         
Sbjct: 12  HEIETCRPYLLRQLNTINPSIILAFG-TSAAASLGLKFKHLSEVRGRKINIKLDDKTFDC 70

Query: 229 LATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
             T HP   +++P  ++     + T     KNL
Sbjct: 71  FVTFHPSFPMRFPHAREQFLKDIKTCLNIYKNL 103


>gi|237509910|ref|ZP_04522625.1| uracil-DNA glycosylase [Burkholderia pseudomallei MSHR346]
 gi|254184640|ref|ZP_04891229.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei
           1655]
 gi|184215232|gb|EDU12213.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei
           1655]
 gi|235002115|gb|EEP51539.1| uracil-DNA glycosylase [Burkholderia pseudomallei MSHR346]
          Length = 224

 Score = 64.0 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 76/221 (34%), Gaps = 21/221 (9%)

Query: 53  ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDL 110
           ++  R+  SP+   A S   +   L  L   +R+   C  HL       + A    G  +
Sbjct: 1   MSPKRNAPSPVRNSAPSKPTRHARLDALLREIRACSVCAPHLPCGPRPVVRA--HPGARI 58

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLS 167
           +I+G  P    + SG P+   +G  L   L    +     +   I  +   +P    +  
Sbjct: 59  LIVGQAPGARVHASGIPWDDASGKRLRAWLNVDDATFYDESLFAIVPMGFCYPGRGASGD 118

Query: 168 NIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHS 224
           N     C P+ + ++    P  ++ L IG   +  F     + T  + +  W        
Sbjct: 119 NPPRPECAPLWLDKLLAELPDIRLTLLIGQYAQRRFLGARRKSTLTETVRAWPEYAPEF- 177

Query: 225 IIPTLATVHPQELIQYPLI-KKNTWHA---LITLKKALKNL 261
               +   HP    +     K++ W     L  L+  +  L
Sbjct: 178 ----IPLPHPSP--RNQGWLKQHPWFDAGVLPALRDRVAEL 212


>gi|289582988|ref|YP_003481454.1| uracil-DNA glycosylase [Natrialba magadii ATCC 43099]
 gi|289532541|gb|ADD06892.1| Uracil-DNA glycosylase superfamily [Natrialba magadii ATCC 43099]
          Length = 216

 Score = 64.0 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 57/170 (33%), Gaps = 21/170 (12%)

Query: 85  RSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT--GN------- 134
               +C  LC T    +      G D + +G  P+++ + +G P   +   G+       
Sbjct: 16  EKCRNCPALCETRTQVVHGYGDVGADFLFVGERPTEAADETGIPLVARPAAGDTDTETDL 75

Query: 135 --------MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186
                   + D    +       ++++ ++    P     ++ E++ C P +  +I +I+
Sbjct: 76  RRILERLALCDATSPADRPALENVYLTNLTRCRDPER-PPTDEEIDTCEPYLNAEIRMIN 134

Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLG--KWSNLCTPHSIIPTLATVHP 234
           P+IL+ IG +                L                 +  + P
Sbjct: 135 PEILIPIGERALAELGTEYTTTPADELTLPDAHATTIRGRGFELVPMIDP 184


>gi|126455816|ref|YP_001076735.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei
           1106a]
 gi|242312880|ref|ZP_04811897.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei
           1106b]
 gi|126229584|gb|ABN92997.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei
           1106a]
 gi|242136119|gb|EES22522.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei
           1106b]
          Length = 224

 Score = 64.0 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 76/221 (34%), Gaps = 21/221 (9%)

Query: 53  ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDL 110
           ++  R+  SP+   A S   +   L  L   +R+   C  HL       + A    G  +
Sbjct: 1   MSPKRNAPSPVRNSAPSKPTRHARLDALLREIRACSVCAPHLPCGPRPVVRA--HPGARI 58

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLS 167
           +I+G  P    + SG P+   +G  L   L    +     +   I  +   +P    +  
Sbjct: 59  LIVGQAPGARVHASGIPWDDASGKRLRAWLNVNDATFYDESLFAIVPMGFCYPGRGASGD 118

Query: 168 NIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHS 224
           N     C P+ + ++    P  ++ L IG   +  F     + T  + +  W        
Sbjct: 119 NPPRPECAPLWLDKLLAELPDIRLTLLIGQYAQRRFLGARRKSTLTETVRAWPEYAPEF- 177

Query: 225 IIPTLATVHPQELIQYPLI-KKNTWHA---LITLKKALKNL 261
               +   HP    +     K++ W     L  L+  +  L
Sbjct: 178 ----IPLPHPSP--RNQGWLKQHPWFDADVLPALRDRVAEL 212


>gi|53723012|ref|YP_111997.1| hypothetical protein BPSS1991 [Burkholderia pseudomallei K96243]
 gi|76817382|ref|YP_336257.1| uracil-DNA glycosylase [Burkholderia pseudomallei 1710b]
 gi|126443236|ref|YP_001063849.1| uracil-DNA glycosylase [Burkholderia pseudomallei 668]
 gi|254194419|ref|ZP_04900851.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei
           S13]
 gi|254263619|ref|ZP_04954484.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei
           1710a]
 gi|254300917|ref|ZP_04968361.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei
           406e]
 gi|52213426|emb|CAH39469.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
 gi|76581855|gb|ABA51329.1| uracil-DNA glycosylase [Burkholderia pseudomallei 1710b]
 gi|126222727|gb|ABN86232.1| uracil-DNA glycosylase [Burkholderia pseudomallei 668]
 gi|157810702|gb|EDO87872.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei
           406e]
 gi|169651170|gb|EDS83863.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei
           S13]
 gi|254214621|gb|EET04006.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei
           1710a]
          Length = 224

 Score = 64.0 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 76/221 (34%), Gaps = 21/221 (9%)

Query: 53  ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDL 110
           ++  R+  SP+   A S   +   L  L   +R+   C  HL       + A    G  +
Sbjct: 1   MSPKRNAPSPVRNSAPSKPTRHARLDALLREIRACSVCAPHLPCGPRPVVRA--HPGARI 58

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLS 167
           +I+G  P    + SG P+   +G  L   L    +     +   I  +   +P    +  
Sbjct: 59  LIVGQAPGARVHASGIPWDDASGKRLRAWLNVDDATFYDESLFAIVPMGFCYPGRGASGD 118

Query: 168 NIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHS 224
           N     C P+ + ++    P  ++ L IG   +  F     + T  + +  W        
Sbjct: 119 NPPRPECAPLWLDKLLAELPDIRLTLLIGQYAQRRFLGARRKSTLTETVRAWPEYAPEF- 177

Query: 225 IIPTLATVHPQELIQYPLI-KKNTWHA---LITLKKALKNL 261
               +   HP    +     K++ W     L  L+  +  L
Sbjct: 178 ----IPLPHPSP--RNQGWLKQHPWFDADVLPALRDRVAEL 212


>gi|152965047|ref|YP_001360831.1| uracil-DNA glycosylase superfamily [Kineococcus radiotolerans
           SRS30216]
 gi|151359564|gb|ABS02567.1| Uracil-DNA glycosylase superfamily [Kineococcus radiotolerans
           SRS30216]
          Length = 291

 Score = 64.0 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/237 (12%), Positives = 68/237 (28%), Gaps = 46/237 (19%)

Query: 40  QRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL-- 97
                         +      +   +Q  ++A  A  L EL +       C    T    
Sbjct: 23  PSPVPPGSGWPGDPSGPDTPVAHDPEQVRALA--ATDLAELSARAGVCRACPRLVTWRED 80

Query: 98  ----------------STICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKM 139
                             + +       ++++G  P+    N +G+ F+G ++G+ +   
Sbjct: 81  VARTKRRAYREEPYWGRPVPSLGVGDPRVLVVGLAPAAHGGNRTGRMFTGDRSGDWIIAA 140

Query: 140 LQ-------------SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186
           L              +  +   +  I       PP N   +  E + C   +  ++ L++
Sbjct: 141 LHRAGLATQATSVHAADGLALRRTRIVAPVRCAPPDN-RPTTGERDTCAAWLDAELALVA 199

Query: 187 --PKILLFIGNKTKNFFFNN--------DAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
              +++L +G                     +     G  + L  P   +  L + H
Sbjct: 200 DGLRVVLALGRFAWGVALGAARRAGWSVPRPQPRFGHGAEAVLEGPAGPVRLLGSYH 256


>gi|320009332|gb|ADW04182.1| Uracil-DNA glycosylase superfamily [Streptomyces flavogriseus ATCC
           33331]
          Length = 265

 Score = 64.0 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 60/226 (26%), Gaps = 46/226 (20%)

Query: 55  NIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL----------------- 97
             R             A +   L EL +L+     C                        
Sbjct: 6   PDRGADHDDRGYPARHAPRCSGLGELDALVTRCRACPRLVAWREEVAEVKRAAFQDEEYW 65

Query: 98  -STICATQTEGQDLMIIGYTPSDS-DNISGKPFSGK-TGNMLDKMLQSIEIMRTQIHI-- 152
              +         + ++G  P+    N +G+ F+G   G+ L   L  + I      +  
Sbjct: 66  GRPVPGFGPADATVAVVGLAPAAHGGNRTGRMFTGDAAGDFLFAALHDVGIASQPSSVHP 125

Query: 153 -----------SMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKN 199
                      +      PP     +  E + CR  +  +++L+SP  ++++ +G     
Sbjct: 126 GDGLTLRGVRLTSPVHCAPP-ANKPTPGERDTCRAWLSAELDLLSPGLRVVVALGGFGWQ 184

Query: 200 FFF------NNDAQKTYQNLGK----WSNLCTPHSIIPTLATVHPQ 235
                         +     G               +  L + HP 
Sbjct: 185 ALLPVLDEAGWRVPRPRPVFGHGAHAVLPATERRQELHLLGSYHPS 230


>gi|182679400|ref|YP_001833546.1| uracil-DNA glycosylase superfamily protein [Beijerinckia indica
           subsp. indica ATCC 9039]
 gi|182635283|gb|ACB96057.1| Uracil-DNA glycosylase superfamily [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 236

 Score = 64.0 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 55/187 (29%), Gaps = 24/187 (12%)

Query: 65  QQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD-NI 123
            +  S   +   L +L+ +LR          +   +         L+I+G  P     N 
Sbjct: 25  PEPSSNCPQCPRLSDLRHMLRQSE--PGWHNA--PVPTFGDPLGRLLIVGLAPGVRGANR 80

Query: 124 SGKPFSGKT-GNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLSNI 169
           +G+PF+G   G++L + L                 +   +  I+      PP N+   + 
Sbjct: 81  TGRPFTGDYAGDLLYETLGRFGFTQGTYAAQAQDGLALAECAITNAVRCVPPQNKPTPDE 140

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFF---FNNDAQKTYQNLGKWSNLCTPHSII 226
             +    +      +     L+ +G               +      G W  L   +   
Sbjct: 141 INQCRPFLAQTLSAMPRLTALVALGRIAHESVLRALGLKLKDFPFAHGAWHRLPDRNLS- 199

Query: 227 PTLATVH 233
               + H
Sbjct: 200 -LFDSYH 205


>gi|29832784|ref|NP_827418.1| hypothetical protein SAV_6242 [Streptomyces avermitilis MA-4680]
 gi|29609905|dbj|BAC73953.1| hypothetical protein [Streptomyces avermitilis MA-4680]
          Length = 264

 Score = 64.0 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 61/178 (34%), Gaps = 37/178 (20%)

Query: 60  HSPLVQQADSIAQKACSLHELKSLLRSFHDCHL------------------CSTSLSTIC 101
               + +   +A+ + SL +L   +     C                     +     + 
Sbjct: 7   RDSSLAEGGRLAEGS-SLSDLDEHITGCRACPRLVEWREEVARTKRAAFADWTYWGRPVP 65

Query: 102 ATQTEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKMLQ-------------SIEIM 146
                   L+++G  P+    N +G+ F+G ++G++L   L                 + 
Sbjct: 66  GFGPVDASLLVVGLAPAAHGANRTGRMFTGDRSGDVLYAALHDVGLASRATAVSADDGLE 125

Query: 147 RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFF 202
              + I+      PP     +  E + CRP ++R++EL+ P  + ++ +G        
Sbjct: 126 LYGVRITSPVHCAPP-ANKPTPEERDTCRPWLVRELELLRPTLRAVVVLGAFGWQAAL 182


>gi|253995823|ref|YP_003047887.1| hypothetical protein Mmol_0450 [Methylotenera mobilis JLW8]
 gi|253982502|gb|ACT47360.1| hypothetical protein Mmol_0450 [Methylotenera mobilis JLW8]
          Length = 205

 Score = 64.0 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 27/74 (36%), Gaps = 1/74 (1%)

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247
           K+LL +G    +       Q         +     +  +P + T HP  L++    K   
Sbjct: 133 KLLLVMGEAAAHSLLG-QLQGMEDWRSAQAASPIYYQHLPVVITYHPAFLLKNTAYKAQA 191

Query: 248 WHALITLKKALKNL 261
           W  L   K+ L+ L
Sbjct: 192 WVDLCAAKRILQGL 205


>gi|149175790|ref|ZP_01854408.1| putative uracil-DNA glycosylase, family 4 [Planctomyces maris DSM
           8797]
 gi|148845237|gb|EDL59582.1| putative uracil-DNA glycosylase, family 4 [Planctomyces maris DSM
           8797]
          Length = 227

 Score = 64.0 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 58/201 (28%), Gaps = 40/201 (19%)

Query: 73  KACSLHELKSLLRSFHDCHL------------------CSTSLSTICATQTEGQDLMIIG 114
                ++L   + +   C                           +         L+I+G
Sbjct: 2   SESQWNQLNQNIITCTRCERLLTHCQKIAAEKRKSFRDWDYWGRPVPNFGDSAAQLLIVG 61

Query: 115 YTPSDSD-NISGKPFSG-KTGNMLDKMLQSIEI-------------MRTQIHISMISPWH 159
             P+    N +G+ F+G ++G+ L + L                        I+      
Sbjct: 62  LAPAAHGANRTGRMFTGDRSGDWLYRALFKAGFASQPAAEHISDGLTLINCAITATCHCA 121

Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
           PP     +  E+E C P + + ++L+  ++ L +G        +    +  +  GK    
Sbjct: 122 PP-ANKPTREEIENCHPWLEQTVDLLPVQVFLALGQIGWKAVLDFKK-RQGKLTGKRPVF 179

Query: 220 CTP-----HSIIPTLATVHPQ 235
                         + + HP 
Sbjct: 180 SHGAEYQFPDGHWLVGSYHPS 200


>gi|167840674|ref|ZP_02467358.1| Uracil DNA glycosylase superfamily superfamily protein
           [Burkholderia thailandensis MSMB43]
          Length = 224

 Score = 63.6 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 76/221 (34%), Gaps = 21/221 (9%)

Query: 53  ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDL 110
           +   R+  SP+   A     +   L  L   +R+   C  HL       + A       +
Sbjct: 1   MPPKRNEPSPIRNGARPKPTRHACLDALLREIRACTVCAPHLPCGPRPVVRAD--PSARI 58

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLS 167
           +I+G  P    + SG P++  +G  L + L    +     +   I  +   +P    +  
Sbjct: 59  LIVGQAPGARVHASGIPWNDASGKRLREWLNVDDATFYDESLFAIVPMGFCYPGRGASGD 118

Query: 168 NIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHS 224
           N     C P+ + ++    P  ++ L IG   +  F     + +  + +  WS       
Sbjct: 119 NPPRPECAPLWLDKLLGELPDIRLTLLIGQYAQRRFLGARRKPSLTETVRAWSEYAPEF- 177

Query: 225 IIPTLATVHPQELIQYPLI-KKNTWHA---LITLKKALKNL 261
               +   HP    +     K++ W     L  L+  +  L
Sbjct: 178 ----IPLPHPSP--RNQGWLKQHPWFDAEVLPALRGKVAEL 212


>gi|83858188|ref|ZP_00951710.1| hypothetical protein OA2633_01776 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83853011|gb|EAP90863.1| hypothetical protein OA2633_01776 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 220

 Score = 63.6 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 56/193 (29%), Gaps = 27/193 (13%)

Query: 59  IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPS 118
              P    A      A  L  + +    F+           + +   E   L+++G  P 
Sbjct: 7   PAEPAADCALCPRLVAYRLENVAAEPDWFNG---------AVPSFGDEQARLLVVGLAPG 57

Query: 119 DSD-NISGKPFSGK-TGNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGN 163
               N + +PF+G   G++L   L++    + +               I+      PP N
Sbjct: 58  RGGANRTARPFTGDWAGDLLYPTLEAFGFSKGRFDPDGNDDLRLVDAMITNAVRCVPPQN 117

Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSNLC 220
           + +          +  R   L     L+ +G  +                   G   ++ 
Sbjct: 118 KPIGAEMNNCRPFLASRMDALPRLTTLICLGRVSHENTLKALGYKQSAFKFAHGARHDVD 177

Query: 221 TPHSIIPTLATVH 233
            P+  +    + H
Sbjct: 178 GPNGPLALFDSYH 190


>gi|289643514|ref|ZP_06475632.1| Uracil-DNA glycosylase superfamily [Frankia symbiont of Datisca
           glomerata]
 gi|289506698|gb|EFD27679.1| Uracil-DNA glycosylase superfamily [Frankia symbiont of Datisca
           glomerata]
          Length = 288

 Score = 63.6 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 55/183 (30%), Gaps = 39/183 (21%)

Query: 69  SIAQKACSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDL 110
            +A  A    EL + +     C                           + +       +
Sbjct: 10  RLAASAADTAELDARMSVCRACPRLVDWREEVAQLRRAAFARERYWGRPVPSFGPADARV 69

Query: 111 MIIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQSIEIMRTQ-------------IHISMI 155
           +++G  P+    N +G+ F+G ++G+ L   L  + + R                 I   
Sbjct: 70  LVVGLAPAAHGGNRTGRIFTGDRSGDWLFASLHRVGLARLPTSLSAGDGQRLISTRIVAA 129

Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFF---FNNDAQKTY 210
               PP     + +E + C+  ++R +EL+ P  + ++ +G                   
Sbjct: 130 VRCAPP-ANKPTTLERDACQGWLIRDLELLRPTLRAIVVLGGFAWTALWPALGRAGHPVP 188

Query: 211 QNL 213
              
Sbjct: 189 SPR 191


>gi|256371613|ref|YP_003109437.1| Uracil-DNA glycosylase superfamily [Acidimicrobium ferrooxidans DSM
           10331]
 gi|256008197|gb|ACU53764.1| Uracil-DNA glycosylase superfamily [Acidimicrobium ferrooxidans DSM
           10331]
          Length = 215

 Score = 63.6 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 60/187 (32%), Gaps = 28/187 (14%)

Query: 74  ACSLHELKSLLRSFHDCHLCSTSLST----------ICATQTEGQDLMIIGYTPSDSDNI 123
           A +L +L   + +   C        T          +         ++++G  PS     
Sbjct: 2   ATALEQLAQDILTCCRCDRLVEWRRTTSQSDWVALPVPGFGDPAARILVVGLAPSRRGAN 61

Query: 124 SG-KPFSGKTG-NMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLSN 168
           +  + F+G      L   L             +   ++ T + +S  +   PP N     
Sbjct: 62  AHGRMFTGDPSAAFLTAALWRLGLANQPTSTSRDDGLVLTDVWLSAAARCAPPDN-RPRA 120

Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPT 228
            E+  CRP ++R++EL+  +  + +G    +       +   +                 
Sbjct: 121 GELAACRPYLVRELELVPWRSAVALGAIAWSALAAALGEPLGRFRH--GERIELGRGRLV 178

Query: 229 LATVHPQ 235
           LA+ HP 
Sbjct: 179 LASYHPS 185


>gi|269959592|ref|ZP_06173973.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269835650|gb|EEZ89728.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 190

 Score = 63.6 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 69/181 (38%), Gaps = 17/181 (9%)

Query: 76  SLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
           SL  L   +R+   C   L   +   + A   +   ++IIG  P    + +  P++  +G
Sbjct: 2   SLETLLKQVRACQICADDLPLGANPVVQA--AKDARILIIGQAPGTRVHKTSIPWNDPSG 59

Query: 134 NMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--K 188
           + L + L     I     +I I  +   +P    +      + C P   ++I    P  +
Sbjct: 60  DRLRQWLDIDKDIFYDPNKIAIVPMGFCYPGKGNSGDLPPRKECAPAWHKKILEQLPNIE 119

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247
           + L IG  ++ ++  N  +   Q + +W +          +   HP    +  L  KKN 
Sbjct: 120 LTLLIGQYSQQYYLTNKPKTLTQTVQQWQDWEPDF-----IPLPHPSP--RNTLWLKKNP 172

Query: 248 W 248
           W
Sbjct: 173 W 173


>gi|223984893|ref|ZP_03634999.1| hypothetical protein HOLDEFILI_02298 [Holdemania filiformis DSM
           12042]
 gi|223963137|gb|EEF67543.1| hypothetical protein HOLDEFILI_02298 [Holdemania filiformis DSM
           12042]
          Length = 201

 Score = 63.6 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 56/170 (32%), Gaps = 14/170 (8%)

Query: 77  LHELKSLLRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
             +LK+ L+    C          I    +    +  I   PS     +G PF+  +G  
Sbjct: 10  FEQLKTQLQHCRVCENQMKDEPHPIF-QGSLDSKIFQISQAPSRRVMETGLPFNDASGKK 68

Query: 136 LDKMLQSI----EIMRTQIHISMISPWHPPGNRNLSN--IEMEICRPIIMRQIELISPKI 189
           L +    I           +I+ I+  +P   +   +           + +++EL+ P+ 
Sbjct: 69  LKQEWYQITDEQFYDPRLFYIASIARCYPGKAKGSGDLRPPKHCAELYLRQELELVQPQR 128

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
           ++ IG+    + F   + +                 IP     HP  L +
Sbjct: 129 IVLIGSYAAQWLFPELSLED------LIFQTQDFRGIPVFTLPHPSPLNR 172


>gi|84683551|ref|ZP_01011454.1| uracil-DNA glycosylase, putative [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84668294|gb|EAQ14761.1| uracil-DNA glycosylase, putative [Rhodobacterales bacterium
           HTCC2654]
          Length = 197

 Score = 63.6 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 61/195 (31%), Gaps = 22/195 (11%)

Query: 80  LKSLLRSFHDCHLCSTSLST-----ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L   +R    C     + +T       A       L +IG  P    + SG PF+  +G+
Sbjct: 7   LADQIRKCRICAAAFRATATGHEPRPVAWFDPSARLRVIGQAPGLRVHESGIPFNDPSGD 66

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRN--LSNIEMEICRPIIMRQIELISPKI 189
            L   +   +     R +I I+ ++   P  +                       ++P +
Sbjct: 67  RLRDWMGVDRDTFYDRARIAITPMAFCFPGYDARGSDLPPPRVCAETWHDAVDATLAPTL 126

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248
            L +G   +  +    A  T    G W +          L   HP    +     +KN W
Sbjct: 127 TLLVGAYAQRRYLGTRASLTDTVRG-WRDHLPD-----ILPLPHPSW--RNTGWLRKNPW 178

Query: 249 --HALI-TLKKALKN 260
               L+  L+  +  
Sbjct: 179 FEADLLPVLRTRVAE 193


>gi|153006593|ref|YP_001380918.1| uracil-DNA glycosylase superfamily protein [Anaeromyxobacter sp.
           Fw109-5]
 gi|152030166|gb|ABS27934.1| Uracil-DNA glycosylase superfamily [Anaeromyxobacter sp. Fw109-5]
          Length = 186

 Score = 63.6 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 53/155 (34%), Gaps = 21/155 (13%)

Query: 101 CATQTEGQDLMIIGYTPSDSD-NISGKPFSGK-TGNMLDKMLQ-------------SIEI 145
                    ++++G  P     N +G+ F+G  +G+ L   L                 +
Sbjct: 2   PGFGDPAARIVLLGLAPGAHGANRTGRMFTGDGSGDFLYAALHRAGLASQPLARGVDDGL 61

Query: 146 MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN- 204
           + T   ++      PP N   +  E+  C P + R++  + P++++ +G    +    + 
Sbjct: 62  VLTGAFVTNACRCAPPDN-RPAPEELARCAPFLDRELAALRPEVIVALGAIAWDAALAHL 120

Query: 205 --DAQKTYQNLGKW-SNLCTPHSIIP-TLATVHPQ 235
                   +   ++           P  L + HP 
Sbjct: 121 ARGGAAVPRPRPRFRHGAELRLEGAPLLLGSYHPS 155


>gi|115375460|ref|ZP_01462720.1| uracil-DNA glycosylase [Stigmatella aurantiaca DW4/3-1]
 gi|310821379|ref|YP_003953737.1| uracil-DNA glycosylase, family 4 [Stigmatella aurantiaca DW4/3-1]
 gi|115367503|gb|EAU66478.1| uracil-DNA glycosylase [Stigmatella aurantiaca DW4/3-1]
 gi|309394451|gb|ADO71910.1| uracil-DNA glycosylase, family 4 [Stigmatella aurantiaca DW4/3-1]
          Length = 229

 Score = 63.6 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 54/196 (27%), Gaps = 41/196 (20%)

Query: 77  LHELKSLLRSFHDCHL------------------CSTSLSTICATQTEGQDLMIIGYTPS 118
           L  L + +     C                     +     +         L+I+G  P+
Sbjct: 4   LEALHAEITQCRACPRLVAWREEVAQVKRRAFQDWTYWGRAVPGFGDPRARLLIVGLAPA 63

Query: 119 DSD-NISGKPFSG-KTGNMLDKMLQSIEIMRTQ-------------IHISMISPWHPPGN 163
               N +G+ F+G ++G+ L   L                       +I+  +   PP N
Sbjct: 64  AHGANRTGRFFTGDRSGDFLMAGLYRAGFANQPLSQHAGDGLKLRGAYITAAARCAPPEN 123

Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF------NNDAQKTYQNLGKWS 217
                 E+  C P I R++ L+  ++ L +G                   K        +
Sbjct: 124 -KPLPGELARCAPFIDRELALLPTRVFLALGAIAWGAALTVLARTGVVLPKPRPVFAHGA 182

Query: 218 NLCTPHSIIPTLATVH 233
               P      +   H
Sbjct: 183 EWALPG-GRTLVGCYH 197


>gi|330465821|ref|YP_004403564.1| uracil-DNA glycosylase superfamily protein [Verrucosispora maris
           AB-18-032]
 gi|328808792|gb|AEB42964.1| uracil-DNA glycosylase superfamily protein [Verrucosispora maris
           AB-18-032]
          Length = 237

 Score = 63.6 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 63/206 (30%), Gaps = 46/206 (22%)

Query: 71  AQKACSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLMI 112
           A +A  L +L + +     C                           +         + I
Sbjct: 5   AARATDLADLDAAVSDCFACPRLVQWREEVARTKRAAFRDQEYWGRPVPGFGDPAARIGI 64

Query: 113 IGYTPSDS-DNISGKPFSG-KTGNMLDKMLQ-------------SIEIMRTQIHISMISP 157
           +G  P+    N +G+ F+G ++G++L   L                 +      I     
Sbjct: 65  LGLAPAAHGGNRTGRIFTGDRSGDVLFAALHRAGLANQPTSVAADDGLTLRHTRIFAAVR 124

Query: 158 WHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNF-------FFNNDAQK 208
             PP N   + +E + C P + R++ LI P  ++++ +G              +   A  
Sbjct: 125 CAPPDN-KPTPVERDTCAPWLHREVALIRPTLRVVVALGAFAWAAWWPVSRDVYGVAAPS 183

Query: 209 TYQNLGKWSNLCTPHSIIP-TLATVH 233
              + G         + +P  L   H
Sbjct: 184 PRPSFG--HGAHWSGTAVPELLGCYH 207


>gi|190892128|ref|YP_001978670.1| uracil-DNA glycosylase [Rhizobium etli CIAT 652]
 gi|190697407|gb|ACE91492.1| probable uracil-DNA glycosylase protein [Rhizobium etli CIAT 652]
          Length = 210

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 61/189 (32%), Gaps = 20/189 (10%)

Query: 77  LHELKSLLRSFHDC---HLCSTSLSTI-----CATQTEGQDLMIIGYTPSDSDNISGKPF 128
           L  L+  + +   C        +          A  +    ++I G  P    + SG PF
Sbjct: 7   LETLRREIAACRICRDAPAKGPAHRLPQEPRPVAVISSNARILIAGQAPGLRVHESGLPF 66

Query: 129 SGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSN-IEMEICRPIIMRQIEL 184
              +G+ L   L   ++    R +  I  +    P  +   ++      C P   +++  
Sbjct: 67  DDASGDRLRSWLGVDRASFYDRDRFAIVPMGFCFPGYDDKGADLPPRRECAPFWRQRVLS 126

Query: 185 ISPKI--LLFIGNKTKNFFFNNDAQKTY--QNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
             P+I  +L IG   + +      Q        G W +          L   HP    + 
Sbjct: 127 AMPQIELVLVIGQYAQAWHMAGGGQGGMAETVRG-WRDSLMSGRSPAVLPLPHPSW--RN 183

Query: 241 PLI-KKNTW 248
               K+N+W
Sbjct: 184 SGWLKRNSW 192


>gi|329890089|ref|ZP_08268432.1| uracil DNA glycosylase superfamily protein [Brevundimonas diminuta
           ATCC 11568]
 gi|328845390|gb|EGF94954.1| uracil DNA glycosylase superfamily protein [Brevundimonas diminuta
           ATCC 11568]
          Length = 210

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 58/207 (28%), Gaps = 37/207 (17%)

Query: 88  HDCHLC--------STSLS-------TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131
            DC LC          +            +       L+I G  P  +  N +G+PF+G 
Sbjct: 7   RDCPLCPRLVAYRAENARQNPDWWNGPAPSFGDPNARLLIAGLAPGRTGANRTGRPFTGD 66

Query: 132 T-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177
             G +L   L+                       I+      PP N+  +  E      +
Sbjct: 67  HAGWLLYDTLKKTGFAKGSYDPDGHDDLTLVDCMITNAVRCAPPQNKPTATEENTCRPFL 126

Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237
           + R   L   K+++ +G+ ++                    +         + + H   L
Sbjct: 127 VDRLTALPRLKVIVTLGDVSRRSILRTLGYPGSAIPAG-HGVEGQVGPYTLINSYHCSRL 185

Query: 238 IQYPLIKKNT---WHA-LITLKKALKN 260
                  + T   +       K AL+ 
Sbjct: 186 --NTNTGRLTAEMFEDIFKRAKAALEA 210


>gi|291276600|ref|YP_003516372.1| hypothetical protein HMU03680 [Helicobacter mustelae 12198]
 gi|290963794|emb|CBG39630.1| Putative hypothetical protein [Helicobacter mustelae 12198]
          Length = 211

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 53/187 (28%), Gaps = 12/187 (6%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
            +   LH L+  +     C         I         ++ +  TP         P +  
Sbjct: 37  DQKEDLHSLRQKILHCRFCERSKI-QEPIFGILNTAARVVFVTPTPILDAKNQFLP-NRS 94

Query: 132 TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191
              + D +         +  I  +              E   C+     Q++ +   ++L
Sbjct: 95  ARMLQDILTNVFGFDAREYGILSLLKCADTPITK---EEFLQCQLHFFAQLQKMPHAMVL 151

Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHAL 251
             G        +          GK   L         L T    +L++ P +K+ T   L
Sbjct: 152 CFGG---KEALDFFDLLDQNFFGKLIKLRDQ----RFLITYSLLDLLKNPSLKRETMQHL 204

Query: 252 ITLKKAL 258
             LK+AL
Sbjct: 205 SLLKEAL 211


>gi|116695781|ref|YP_841357.1| Uracil-DNA glycosylase [Ralstonia eutropha H16]
 gi|113530280|emb|CAJ96627.1| Uracil-dna glycosylase [Ralstonia eutropha H16]
          Length = 205

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 73/198 (36%), Gaps = 19/198 (9%)

Query: 75  CSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
            SL  L + +R+   C  HL       +         ++I+G  P    + +G P++  +
Sbjct: 7   ASLDALLTEVRACRACAPHLPLGPRPIV--RVGADARILIVGQAPGIRVHETGIPWNDAS 64

Query: 133 GNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189
           G+ L + L    +  +  +Q  I  +   +P   ++  N     C P+ + ++    P I
Sbjct: 65  GDRLRQWLGVDAATFLDESQFAIIPMGFCYPGRGKSGDNPPRRECAPLWLDRLLAQLPSI 124

Query: 190 --LLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKN 246
              L +G   +  F     + T  + +  W +          +   HP      P  K++
Sbjct: 125 ELTLLVGQYAQRHFLGARRKPTLTETVRAWKDYAPGF-----VPLPHPSP-RNQPWFKQH 178

Query: 247 TW-HA--LITLKKALKNL 261
            W     L  L++ +  L
Sbjct: 179 PWFEDEVLPMLRERVGRL 196


>gi|156972577|ref|YP_001443484.1| uracil-DNA glycosylase [Vibrio harveyi ATCC BAA-1116]
 gi|156524171|gb|ABU69257.1| hypothetical protein VIBHAR_00217 [Vibrio harveyi ATCC BAA-1116]
          Length = 190

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 68/181 (37%), Gaps = 17/181 (9%)

Query: 76  SLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
           SL  L   +R+   C   L   +   + A   +   ++IIG  P    + +  P++  +G
Sbjct: 2   SLETLLKQVRACQICADDLPLGANPVVQA--AKDARILIIGQAPGTRVHKTSIPWNDPSG 59

Query: 134 NMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--K 188
           + L + L           +I I  +   +P    +      + C P   ++I    P  +
Sbjct: 60  DRLRQWLDIDKDTFYDPNKIAIVPMGFCYPGKGNSGDLPPRKECAPAWHKKILDQLPNIE 119

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247
           + L IG  ++ ++  N  +   Q + +W +          +   HP    +  L  KKN 
Sbjct: 120 LTLLIGLYSQQYYLTNKPKTLTQTVQQWQDWEPDF-----IPLPHPSP--RNTLWLKKNP 172

Query: 248 W 248
           W
Sbjct: 173 W 173


>gi|126739939|ref|ZP_01755630.1| uracil-DNA glycosylase, putative [Roseobacter sp. SK209-2-6]
 gi|126719171|gb|EBA15882.1| uracil-DNA glycosylase, putative [Roseobacter sp. SK209-2-6]
          Length = 204

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 60/198 (30%), Gaps = 24/198 (12%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLS------TICATQTEGQDLMIIGYTPSDSDNISGKPF 128
            SL +L   + S   C     +         +    +    +++ G  P    + SGKPF
Sbjct: 6   KSLKDLSQSISSCRLCQSRFAATHSAHEPRPVVWL-SSTASILVSGQAPGARVHASGKPF 64

Query: 129 SGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNL---SNIEMEICRPIIMRQI 182
           +  +G  L + +    +      ++ +  ++   P  N          +           
Sbjct: 65  TDPSGERLRQWMGVSDAEFYDLKKVAVLPLAFCFPGYNAKGSDLPPPPLCARTWHAQVMQ 124

Query: 183 ELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL 242
           E+ + ++ L +G   + +            +  W N              HP    +   
Sbjct: 125 EMPNLRLKLLVGGYAQKWHLGTKQSV-TDCVASWRNAPEG-----VFPLPHPSW--RNTG 176

Query: 243 I-KKNTW--HALITLKKA 257
             KKN W    L+ + + 
Sbjct: 177 WLKKNPWFEEELLPVLQK 194


>gi|242129248|gb|ACS83697.1| uracil-DNA glycosylase superfamily [uncultured bacterium AOCefta2]
          Length = 280

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 63/178 (35%), Gaps = 28/178 (15%)

Query: 81  KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDK 138
           +   R F DC         + +       +++IG  P+    N +G+ F+G ++G+ L +
Sbjct: 81  REKTRRFRDCEYWG---RPVPSFGVATARMLVIGLAPAAHGGNRTGRIFTGDRSGDWLFR 137

Query: 139 MLQSIEIMRTQ-------------IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELI 185
            L                        I+  +   PP N     +E+E CRP +  + +L+
Sbjct: 138 ALHKAGFANQPQSVSVDDGLALKDCFIAATARCAPPDNT-PLPVELENCRPYLTAEADLL 196

Query: 186 SP--KILLFIGNKTKNFFF------NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
            P  K ++ +G     ++         +  +        +     ++    L + HP 
Sbjct: 197 WPQLKAVVPLGGIAFAWWLNYLKGRGLNLGRPLPRFAHLAEFAFENAP-SVLCSFHPS 253


>gi|15899448|ref|NP_344053.1| hypothetical protein SSO2733 [Sulfolobus solfataricus P2]
 gi|284174306|ref|ZP_06388275.1| hypothetical protein Ssol98_06557 [Sulfolobus solfataricus 98/2]
 gi|13816058|gb|AAK42843.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
 gi|261601217|gb|ACX90820.1| Uracil-DNA glycosylase superfamily [Sulfolobus solfataricus 98/2]
          Length = 219

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 69/210 (32%), Gaps = 35/210 (16%)

Query: 77  LHELKSLLRSFHDCHLC---------STSLSTICATQTEGQDLMIIGYTP-SDSDNISGK 126
           +    S L +   C            +     +        +++I+G  P  +  N +G+
Sbjct: 1   MENFISRLIACDKCPRLTQYRKSFPDNYWKKPVPPNGQIDAEIVIVGLAPAGNGGNRTGR 60

Query: 127 PFSG-KTGNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSNIEME 172
            F+G ++ N L   L ++ +                  +I+      PP N   +  E+ 
Sbjct: 61  MFTGDESSNNLANALYAVGLSNQPFSVSKDDGLKLFNVYITSAVKCAPPQN-KPNKDEII 119

Query: 173 ICRPIIMRQIELISP-KILLFIGNKTKNFF------FNNDAQKTYQNLGKWSNLCTPH-S 224
            C   +  ++ ++   K+ + +G    +           +        G    +  P  S
Sbjct: 120 NCSVFLEEEVRILKNTKVYIALGKIAWDSLIYVFKKIGYNVPNVRFYHGALVKVVKPDMS 179

Query: 225 IIPTLATVHPQELIQYPLIKKNTWHALITL 254
           II  + + HP    +     + T + LI +
Sbjct: 180 IIWLVGSYHPSP--RNMKTGRLTINMLIEI 207


>gi|170693255|ref|ZP_02884415.1| Uracil-DNA glycosylase superfamily [Burkholderia graminis C4D1M]
 gi|170141785|gb|EDT09953.1| Uracil-DNA glycosylase superfamily [Burkholderia graminis C4D1M]
          Length = 194

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 64/193 (33%), Gaps = 21/193 (10%)

Query: 77  LHELKSLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           L +L S +RS   C      +   + A  +    ++I+G  P    + SG P+S  +G  
Sbjct: 2   LDKLLSDIRSCTLCASKLPHAPRPVLAA-SAQARILIVGQAPGARVHASGIPWSDASGTR 60

Query: 136 LDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELI--SPKIL 190
           L   L    +     ++  I  +   +P   R+        C P   +++     + ++ 
Sbjct: 61  LRAWLGVDDATFYDDSKFAIVPVGFCYPGRGRSGDLPPRPECAPRWHQELLQHLGAVRLT 120

Query: 191 LFIGNKTKNFFFNN-DAQKTYQNLGKWSNLCTPHSIIPTLATVHP-----QELIQYPLIK 244
           L +G   + F   +         L +W            +   HP         + P  +
Sbjct: 121 LLVGQYAQQFGLGDARGPTLTDTLTRWQEY-----GPRVMPLPHPSPRNIAWFKRNPWFE 175

Query: 245 KNTWHALITLKKA 257
            +    L  L+  
Sbjct: 176 ADV---LPALRAR 185


>gi|222480403|ref|YP_002566640.1| hypothetical protein Hlac_1992 [Halorubrum lacusprofundi ATCC
           49239]
 gi|222453305|gb|ACM57570.1| conserved hypothetical protein [Halorubrum lacusprofundi ATCC
           49239]
          Length = 211

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 57/164 (34%), Gaps = 15/164 (9%)

Query: 86  SFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK-TGNMLDKMLQSI 143
              +C  LC      +      G + +++G  PS +   +G PF+G   G  +  +   +
Sbjct: 17  DCENCPELCGPRDRVVHGYGDVGGEFLVVGTRPSATAEANGIPFTGAGAGERVQSIFADL 76

Query: 144 EIMR----------TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
             +R            I  + ++    P     ++ E+E C P +  +I +I+P+I++ +
Sbjct: 77  GFVRSAPDATEPDVQNIFFTNLTRCRHPKRE-PTDREVETCEPFLNAEIRMINPQIIVPV 135

Query: 194 GNKTKN--FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
           G +            +    ++               +    P 
Sbjct: 136 GERPLRELAVAYTTRRPDSFDIDAEHATTIRGRGFELVPMKEPS 179


>gi|90413400|ref|ZP_01221393.1| hypothetical protein P3TCK_13406 [Photobacterium profundum 3TCK]
 gi|90325642|gb|EAS42111.1| hypothetical protein P3TCK_13406 [Photobacterium profundum 3TCK]
          Length = 195

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 62/181 (34%), Gaps = 13/181 (7%)

Query: 74  ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
           A  L+ +   +R    C     +             LMIIG  P    + +G P++  +G
Sbjct: 2   AKHLNNILDQIRHCEICKDHLLAGPRPIIQAHSQAKLMIIGQAPGTKVHETGIPWNDPSG 61

Query: 134 NMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK-- 188
             L + L           QI I  +   +P   ++        C      Q+  + P   
Sbjct: 62  ERLRRWLDLDSETFYNPQQIAIMPMGLCYPGKGKSGDLPPRPECATQWHHQVLPLLPNIG 121

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247
           + L IG   +N++ NN  +   + +  W      +     +   HP    +  L  KKN 
Sbjct: 122 MTLVIGQYAQNYYLNNKPKTLTETVRAWRQWAPRY-----IPMPHPSP--RNTLWLKKNP 174

Query: 248 W 248
           W
Sbjct: 175 W 175


>gi|221635602|ref|YP_002523478.1| uracil-DNA glycosylase superfamily [Thermomicrobium roseum DSM
           5159]
 gi|221157426|gb|ACM06544.1| uracil-DNA glycosylase superfamily [Thermomicrobium roseum DSM
           5159]
          Length = 251

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 65/211 (30%), Gaps = 53/211 (25%)

Query: 77  LHELKSLLRSFHDCHLC------------------STSLSTICATQTEGQDLMIIGYTPS 118
           L  L   + +   C                           +         ++++G  P+
Sbjct: 8   LSALAQRIVACAACPRLVAYRAAVAQAKRRAYRDEDYWGKPVPGFGDPQARVIVVGLAPA 67

Query: 119 DS-DNISGKPFSGK-TGNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGN 163
               N +G+ F+G  +G+ L + L  + +    +             +I+      PP N
Sbjct: 68  AHGGNRTGRMFTGDASGDFLYRALYRVGLANQPVSRQRGDGLALREAYITAACRCAPPDN 127

Query: 164 RNLSNIEMEICRPIIMRQIE-LISPKILLFIGNKTKNFFF--------------NNDAQK 208
              +  E+  CRP ++ ++  L   ++L+ +G                         A  
Sbjct: 128 -RPTREELARCRPYLVEELGLLEQAQVLVCLGQIAFEAALAALRELGAGQPEPVGEVATP 186

Query: 209 TYQNLG----KWSNLCTPHSIIPTLATVHPQ 235
             +       +W  L   +S +  +A+ HP 
Sbjct: 187 RPRFRHGALYRWPALPWRNSTLWLIASYHPS 217


>gi|241205032|ref|YP_002976128.1| uracil-DNA glycosylase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858922|gb|ACS56589.1| uracil-DNA glycosylase protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 210

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 59/188 (31%), Gaps = 18/188 (9%)

Query: 77  LHELKSLLRSFHDCHLC--STSLSTICATQTE------GQDLMIIGYTPSDSDNISGKPF 128
           L  L+  + S   C           +               ++I G  P    + SG PF
Sbjct: 7   LEMLRQEIGSCRICRDAPGKGLEHRLPHEPRPVVVISSNARILIAGQAPGLRVHESGLPF 66

Query: 129 SGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSN-IEMEICRPIIMRQIEL 184
              +G+ L   L   ++    R +  I  +    P  +   ++      C P   +++  
Sbjct: 67  DDASGDRLRSWLGVDRASFYDRDRFAIVPMGFCFPGYDDKGADLPPRRECAPFWRQRVIS 126

Query: 185 ISPKI--LLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241
             P+I  +L IG   + +           + +  W +    +     L   HP    +  
Sbjct: 127 AMPQIELVLVIGQYAQAWHMAGERRDNMTETVRAWRDCFLSNRSPAVLPLPHPSW--RNS 184

Query: 242 LI-KKNTW 248
              K+N W
Sbjct: 185 GWLKRNPW 192


>gi|90961081|ref|YP_534997.1| Uracil DNA glycosylase superfamily protein [Lactobacillus
           salivarius UCC118]
 gi|90820275|gb|ABD98914.1| Uracil DNA glycosylase superfamily protein [Lactobacillus
           salivarius UCC118]
          Length = 198

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/168 (12%), Positives = 49/168 (29%), Gaps = 18/168 (10%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
                ++I+G  P      +   ++  +G+ L   L           +  I P       
Sbjct: 36  NPKAKILIVGQAPGQKAQDTHMVWNDLSGDRLRTWLDVSRDEFYNSDLFAIMPMDFYFPG 95

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    +     +  + + ++ + +G+     + N  +        K +++
Sbjct: 96  KGKGGDLPPRKNFAAKWHPKLRKLMPNIELTILVGSYAVKKYLNLKSSA------KLTDI 149

Query: 220 CTPHSII--PTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKN 260
              +          VHP       L + P  +K     L  L   +KN
Sbjct: 150 VKDYQTYLPEYFPLVHPSPRNLIWLKKNPWFEKQVVKDLQKLVSEIKN 197


>gi|54310493|ref|YP_131513.1| hypothetical protein PBPRA3427 [Photobacterium profundum SS9]
 gi|46914936|emb|CAG21711.1| conserved hypothetical protein [Photobacterium profundum SS9]
          Length = 197

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 61/184 (33%), Gaps = 14/184 (7%)

Query: 74  ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
           A  L  +   +R    C     +             LMIIG  P    + +G P++  +G
Sbjct: 2   AQHLDNVLDQIRRCEICKDHLIAGPRPIIQAHSQARLMIIGQAPGTKVHETGIPWNDPSG 61

Query: 134 NMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK-- 188
             L + L           QI I  +   +P   ++        C P    Q+  + P   
Sbjct: 62  ERLRRWLDLDSETFYDPQQIAIMPMGLCYPGKGKSGDLPPRPECAPQWHHQVLPLLPNIG 121

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247
           + L IG   +N++ NN  +   + +  W      +     +   HP    +     KKN 
Sbjct: 122 MTLVIGQYAQNYYLNNKPKTLTETVRAWRQWAPRY-----IPLPHPSP--RNTQWLKKNP 174

Query: 248 W-HA 250
           W   
Sbjct: 175 WFED 178


>gi|228952007|ref|ZP_04114102.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228807539|gb|EEM54063.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 155

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 16/125 (12%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
               E    M++G  P +++  +G PFSG+ G  L   L+ I++ R +++I+      P 
Sbjct: 26  GQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQLMDFLERIDVTREEVYITSAVRSRPY 85

Query: 162 G----------------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
                            NR  +  E+    P++  ++E I PK+++ +GN          
Sbjct: 86  KWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDYELEKIHPKLIVTLGNIGLQRLTGKK 145

Query: 206 AQKTY 210
            Q   
Sbjct: 146 KQSQM 150


>gi|86136543|ref|ZP_01055122.1| uracil-DNA glycosylase, putative [Roseobacter sp. MED193]
 gi|85827417|gb|EAQ47613.1| uracil-DNA glycosylase, putative [Roseobacter sp. MED193]
          Length = 196

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 57/199 (28%), Gaps = 25/199 (12%)

Query: 79  ELKSLLRSFHDCHLCSTSLST-----ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
           +L   +     C     +  T       A       ++I G  P    + SGKPF+  +G
Sbjct: 5   QLCEAITQCRICTDRFAATHTGHQPRPVAWFDASARILIAGQAPGLRVHESGKPFTDPSG 64

Query: 134 NMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLS--NIEMEICRPIIMR-QIELISP 187
           + L   L   ++    R ++ I  +    P  N   S         +    R    L + 
Sbjct: 65  DRLRDWLGLDETAFYDRKRVAIVPMGFCFPGYNARNSDLPPPPICAKTWRDRVMQSLPNI 124

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPL 242
            + L IG   + F          +                     HP       L + P 
Sbjct: 125 ALTLAIGAPAQAFHLGGKVPVGQRV------AAWRDHAPRVFPLPHPSWRNTGWLKRNPW 178

Query: 243 IKKNTWHALITLKKALKNL 261
            +      L  L+  +K L
Sbjct: 179 FEAEL---LPVLRGRVKEL 194


>gi|77361963|ref|YP_341537.1| putative uracil-DNA glycosylase family protein [Pseudoalteromonas
           haloplanktis TAC125]
 gi|76876874|emb|CAI89091.1| putative uracil-DNA glycosylase family protein [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 200

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 70/198 (35%), Gaps = 21/198 (10%)

Query: 76  SLHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
            L+EL + +     C   L   +   I         ++I G  P    + SG PF+ ++G
Sbjct: 10  ELNELVAQVSKCVICEPQLPLGARPVI--QFNPNARILIAGQAPGIKVHQSGIPFNDQSG 67

Query: 134 NMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--K 188
             L + L            I I  +   +P   ++      + C P    Q+    P  +
Sbjct: 68  ERLRQWLGLTNDQFYDANNIAILPMGFCYPGKGKSGDLPPRKECAPAWRAQLLAALPNLQ 127

Query: 189 ILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKN 246
           + + +G   + +   +       + +  W +    H ++P     HP    +  +  KKN
Sbjct: 128 LTIVLGKYAQAYHLPDTKKLPLTELVKSWRDYWPSHLVLP-----HPSP--RNNIWLKKN 180

Query: 247 TW---HALITLKKALKNL 261
            W     L  LKK +  +
Sbjct: 181 PWFEQEVLPELKKRVAEV 198


>gi|170702698|ref|ZP_02893561.1| Uracil-DNA glycosylase superfamily [Burkholderia ambifaria
           IOP40-10]
 gi|170132400|gb|EDT00865.1| Uracil-DNA glycosylase superfamily [Burkholderia ambifaria
           IOP40-10]
          Length = 199

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 57/185 (30%), Gaps = 22/185 (11%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L  L + +R+   C   L       + A       ++I+G  P    + SG P+   +G 
Sbjct: 9   LDVLLTEIRACRACEADLPLGPRPVVRA--HRDARILIVGQAPGARVHASGIPWDDASGK 66

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIELISP 187
            L   L          T+  I  +   +P     G+         +    ++ ++  I  
Sbjct: 67  RLRDWLGVDADTFYDETRFAIVPMGFCYPGRGASGDNPPRPECAPLWIDWLLAELPSI-- 124

Query: 188 KILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KK 245
           ++ L IG   +  F  +         +  W +          L   HP    +     K 
Sbjct: 125 RLTLLIGQYAQRHFLRDTRKATLTDTVHAWRDY-----GPDVLPLPHPSP--RNQAWFKH 177

Query: 246 NTWHA 250
           + W  
Sbjct: 178 HPWFD 182


>gi|296283786|ref|ZP_06861784.1| hypothetical protein CbatJ_09196 [Citromicrobium bathyomarinum
           JL354]
          Length = 271

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 33/259 (12%), Positives = 73/259 (28%), Gaps = 29/259 (11%)

Query: 9   QEQILTIALFYADSGV-YWVFDEPNNE------------ATYESQRKEKSIDSAIQPITN 55
           +E       ++AD+GV   V D P+              A  +      S      P   
Sbjct: 12  REAFAASLDWWADAGVLEHVEDAPSGWLKEAEGKGDAQAAQSDRATDAPSAPPPPPPPPP 71

Query: 56  IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLST------ICATQTEGQD 109
            R   S  +      A       +    L +F    + S +L        +         
Sbjct: 72  NRTALSRFIASGSDGAAHPGDPAQWPDDLDAFRAWWMESDALDPPGSYPRVAPRGPAQAQ 131

Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI 169
           +M++   P+  D             +   ML+++       + + + P           +
Sbjct: 132 VMLLVDQPAGED-----LLGEPAAILAANMLRAMGYASDAAYFASVLP-RHTLRPEWDAV 185

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
                  +    + L+ P  ++ +G +       ++  +  +     + +       P  
Sbjct: 186 GRAGYGKLAQHHVALVRPAQVIVLGERVW-SLLAHEMAQEDKA---LTTISHGGGKAPVF 241

Query: 230 ATVHPQELIQYPLIKKNTW 248
           A      L++ P  +  TW
Sbjct: 242 AMPDFASLLRSPAKRAQTW 260


>gi|153835062|ref|ZP_01987729.1| uracil DNA glycosylase superfamily [Vibrio harveyi HY01]
 gi|148868458|gb|EDL67564.1| uracil DNA glycosylase superfamily [Vibrio harveyi HY01]
          Length = 190

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 68/181 (37%), Gaps = 17/181 (9%)

Query: 76  SLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
           SL  L   +R+   C   L   +   + A   +   ++IIG  P    + +  P++  +G
Sbjct: 2   SLETLLKQVRTCQICADDLPLGANPVVQA--AKDARILIIGQAPGTRVHKTSIPWNDPSG 59

Query: 134 NMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--K 188
           + L + L           +I I  +   +P    +      + C P   ++I    P  +
Sbjct: 60  DRLRQWLDIDKDTFYDPNKIAIVPMGFCYPGKGNSGDLPPRKECAPAWHKKILDQLPNIE 119

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247
           + L IG  ++ ++  N  +   Q + +W +          +   HP    +  L  KKN 
Sbjct: 120 LTLLIGLYSQQYYLTNKPKTLTQTVQQWQDWEPDF-----IPLPHPSP--RNTLWLKKNP 172

Query: 248 W 248
           W
Sbjct: 173 W 173


>gi|332969349|gb|EGK08374.1| hypothetical protein HMPREF0476_1386 [Kingella kingae ATCC 23330]
          Length = 252

 Score = 62.5 bits (150), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 82/270 (30%), Gaps = 34/270 (12%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60
           M   R +   + L +   +            +  A    ++   S  +          + 
Sbjct: 1   MLDTRYIHLHEALGLGAMWL-----------HQNAKILGKQPAFSAPTRAPETAKQPALR 49

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI----------CATQTEGQDL 110
                     + +  S   L  L                +              T    +
Sbjct: 50  DTAQPTTSRKSNEPPSFDALDRLRHQTQAKEKAEAEKQVVKTAAAPIPFAVPMPTRMARV 109

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170
           M +    S  D +  + FS + G +L KM  +I +  + +H +         N      +
Sbjct: 110 MALSVCASMPDIVHKRLFSEQDGELLHKMFAAINLQPSDVHCTTWLKNFDNFNPKPDLNQ 169

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230
           ++   P +  + +      LL +G   +    ++  Q   + L +      P        
Sbjct: 170 VQADAPQVQAEWQQCGQPPLLLLGEFFER---DDVQQCLRETLPRAHYFIIP-------- 218

Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALKN 260
             HP  ++++P +K++ W+ L  L+K L +
Sbjct: 219 --HPLRILKHPELKRDAWNGLQKLQKRLND 246


>gi|209549670|ref|YP_002281587.1| uracil-DNA glycosylase protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209535426|gb|ACI55361.1| putative uracil-DNA glycosylase protein [Rhizobium leguminosarum
           bv. trifolii WSM2304]
          Length = 210

 Score = 62.5 bits (150), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 62/193 (32%), Gaps = 26/193 (13%)

Query: 77  LHELKSLLRSFHDC----------HL-CSTSLSTICATQTEGQDLMIIGYTPSDSDNISG 125
           L  L+  + S   C           L        + ++      ++I G  P    + SG
Sbjct: 7   LEILRLEIASCRICRDAPAKGLAYPLPHEPRPVAVISS---SARILIAGQAPGLRVHESG 63

Query: 126 KPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSN-IEMEICRPIIMRQ 181
            PF   +G+ L   L   ++    R +  I  +    P  +   ++      C P   ++
Sbjct: 64  LPFDDASGDRLRSWLGVDRASFYDRDRFAIVPMGFCFPGYDDKGADLPPRRECAPFWRQR 123

Query: 182 IELISPKI--LLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ--- 235
           +    P+I  +L IG   + +           + +  W +    +     L   HP    
Sbjct: 124 VIAAMPQIELVLVIGQYAQAWHMEGERRGNMTETVRAWRDALLSNRSPAVLPLPHPSWRN 183

Query: 236 --ELIQYPLIKKN 246
              L + P  +K 
Sbjct: 184 SGWLKRNPWFEKE 196


>gi|218672996|ref|ZP_03522665.1| phage SPO1 DNA polymerase-related protein [Rhizobium etli GR56]
          Length = 121

 Score = 62.5 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 41/104 (39%), Gaps = 10/104 (9%)

Query: 163 NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP 222
           ++  +  E++ CR  +  ++ L+ PK+++ +G        +   +      GK   +   
Sbjct: 20  HQKPNMGEVKHCRWWLDLELSLVKPKLIVAMGATALAALTDVKGRLQ-DVRGKAMAIEA- 77

Query: 223 HSIIPTLATVHPQELIQYPLIK------KNTWHALITLKKALKN 260
                   TVHP  L++ P  +            ++ +++ +K 
Sbjct: 78  --GRTLFVTVHPSYLLRIPDERLKAEEMARFREDMLKIQRLMKA 119


>gi|258655397|ref|YP_003204553.1| uracil-DNA glycosylase superfamily [Nakamurella multipartita DSM
           44233]
 gi|258558622|gb|ACV81564.1| Uracil-DNA glycosylase superfamily [Nakamurella multipartita DSM
           44233]
          Length = 240

 Score = 62.5 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 61/206 (29%), Gaps = 45/206 (21%)

Query: 72  QKACSLHELKSLLRSFHDCHL-------------CSTSLST-----ICATQTEGQDLMII 113
            +  +L EL   +     C                +    T     +         L+I+
Sbjct: 4   AQIPTLAELDRTIAGCRACPRLVEWREEVARVKRAAFRDQTYWGRGVPGLGPADARLLIV 63

Query: 114 GYTPSDSD-NISGKPFSG-KTGNMLDKMLQSIEIMRTQI-------------HISMISPW 158
           G  P+    N +G+ F+G ++G++L   L    +                   I+     
Sbjct: 64  GLAPAAHGANRTGRMFTGDRSGDVLFAALHRCGLASQPTSTHRGDGLTLRGVRITAPVHC 123

Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFF------NNDAQKTY 210
            PP N   +  E+  C   + R++ L++P  +++L +G                   +  
Sbjct: 124 APPDN-RPTPTEIATCSAYLRRELALMAPTVRVVLTLGAIGWQAMLRVLIADGWPMPRPR 182

Query: 211 QNLGKWSNL---CTPHSIIPTLATVH 233
              G    +         +  L   H
Sbjct: 183 PPFGHGREVALSHPDGRRLTLLGCYH 208


>gi|16126323|ref|NP_420887.1| hypothetical protein CC_2084 [Caulobacter crescentus CB15]
 gi|221235103|ref|YP_002517539.1| uracil DNA glycosylase superfamily protein [Caulobacter crescentus
           NA1000]
 gi|13423565|gb|AAK24055.1| conserved hypothetical protein [Caulobacter crescentus CB15]
 gi|220964275|gb|ACL95631.1| uracil DNA glycosylase superfamily protein [Caulobacter crescentus
           NA1000]
          Length = 194

 Score = 62.5 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 56/180 (31%), Gaps = 15/180 (8%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L  L S + +   C              +    L+I G  P    + +G PF+  +G  L
Sbjct: 3   LDALLSEISACRACAPYLPHTPRPVTRVSTATRLLIAGQAPGRIVHETGLPFNDPSGVRL 62

Query: 137 DKML---QSIEIMRTQIHISMISPWHPPGNRN---LSNIEMEICRPIIMRQIELISPKIL 190
            + +   +     R++I ++ ++   P  N                       L + ++ 
Sbjct: 63  RQWMGIDRETFYGRSEIGVAAMAFCFPGTNPKGGDYPPPPRCAALWRSQLLAALPNVELT 122

Query: 191 LFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248
           L +G   + +       +   + + +W            L   HP    +     K+N W
Sbjct: 123 LLVGRYAQEWALDGRTGKTMTETIERWREF-----GPNVLPLPHPSW--RNTAWLKRNPW 175


>gi|330444946|ref|ZP_08308600.1| uracil DNA glycosylase superfamily protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328493064|dbj|GAA03097.1| uracil DNA glycosylase superfamily protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 195

 Score = 62.5 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 17/181 (9%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
              L+ L++    C         I    +    L++IG  P    + +G PF+  +G+ L
Sbjct: 4   FDNLRDLIKRCEICKDHLEPRPVI--QFSPNAKLLLIGQAPGLKVHQTGIPFNDPSGDRL 61

Query: 137 DKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK--ILL 191
            + L+           I I  +   +P   +         C P   + +  + P   + L
Sbjct: 62  RQWLELDKDTFYNPEHIAIMPMGLCYPGKGKTGDLPPRPECAPQWHQSVLDLMPNIGMTL 121

Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKN 246
            IG   +N++  N  +   + +  W      +     +   HP       L + P  + +
Sbjct: 122 LIGQYAQNYYLPNKPKTLTETVQHWQQWAPRY-----IPLPHPSPRNAIWLKKNPWFEAD 176

Query: 247 T 247
            
Sbjct: 177 V 177


>gi|269956443|ref|YP_003326232.1| Uracil-DNA glycosylase superfamily [Xylanimonas cellulosilytica DSM
           15894]
 gi|269305124|gb|ACZ30674.1| Uracil-DNA glycosylase superfamily [Xylanimonas cellulosilytica DSM
           15894]
          Length = 299

 Score = 62.5 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 66/212 (31%), Gaps = 45/212 (21%)

Query: 68  DSIAQKACSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQD 109
            + A +A  L EL SLL     C                           +     +   
Sbjct: 26  PTGAARARDLAELGSLLVECRACPRLVEWREAAAANPRAAFRGQTYWARPVPGFGDDAAR 85

Query: 110 LMIIGYTPSDSD-NISGKPFSG-KTGNMLDKMLQ-------------SIEIMRTQIHISM 154
           + ++G  P+    N +G+ F+G ++G+ L   L                 ++ T + +  
Sbjct: 86  IAVVGLAPAADGANRTGRLFTGDRSGDFLFAALHRVGLANQPEATSSDDGMVLTGVRLVA 145

Query: 155 ISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFN---NDAQKT 209
                PP     +  E   C P + R++EL+ P  ++++ +G                  
Sbjct: 146 PVRCAPP-ANKPTPEERRRCGPWLARELELLGPGVRVVVALGAIGWAAALRTLEEQGWPV 204

Query: 210 YQNLGKW-SNL-----CTPHSIIPTLATVHPQ 235
            Q   ++  +            +  L + HP 
Sbjct: 205 PQPRPRFAHDAAVPLERPDGGTVTLLGSFHPS 236


>gi|74316721|ref|YP_314461.1| hypothetical protein Tbd_0703 [Thiobacillus denitrificans ATCC
           25259]
 gi|74056216|gb|AAZ96656.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
           25259]
          Length = 207

 Score = 62.1 bits (149), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 47/177 (26%), Gaps = 29/177 (16%)

Query: 85  RSFHDCHLCST------------SLSTICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131
            +   C   +T                +         L+I+G  P     N SG+PF+G 
Sbjct: 5   ANCRACPRLATFLDEVRGRHPDYHARPVPPFGDAAPRLLIVGLAPGMHGANRSGRPFTGD 64

Query: 132 T-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177
             G +L + L                    T   I+      PP        E+  C   
Sbjct: 65  HAGILLYETLHRFGYASAPASRARDDGLQLTGCRITNAVKCLPP-ANKPEPGEIRACNGY 123

Query: 178 IMRQIEL-ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
           +  +I        +L +G             K        ++       +  +++ H
Sbjct: 124 LAAEIAGLPGGATILALGQIAHQAVLRAQGLKLKDYPFTHASDYALPGGLRLVSSYH 180


>gi|262068223|ref|ZP_06027835.1| DNA polymerase, bacteriophage-type [Fusobacterium periodonticum
           ATCC 33693]
 gi|291378091|gb|EFE85609.1| DNA polymerase, bacteriophage-type [Fusobacterium periodonticum
           ATCC 33693]
          Length = 195

 Score = 62.1 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 68/190 (35%), Gaps = 12/190 (6%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             ELK  L S     L                D++ IG  P        K  +  +G  L
Sbjct: 8   WEELKFELGSVGIETLPKDKQEVYIGMGNRNADILFIGNDPKLYLAEDYKVETQSSGEFL 67

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            K+     I+    +I+ ++       +N  + E +I   ++  QI LISPKI++F+G +
Sbjct: 68  IKIFDYAGIVPEAYYITTLTK-REVKIKNFDDEEKKILLDLLNMQIALISPKIVVFLGKE 126

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIKKNT-----WH 249
                  N      +  GK+         I    T   +  I  +    KK+      W+
Sbjct: 127 VAQMI-ENREVDLEKERGKFKKWKGD---IECYLTYDVETAIKARNETGKKSAVATNFWN 182

Query: 250 ALITLKKALK 259
            +  +K+ L 
Sbjct: 183 DIKNIKERLD 192


>gi|256394362|ref|YP_003115926.1| uracil-DNA glycosylase superfamily [Catenulispora acidiphila DSM
           44928]
 gi|256360588|gb|ACU74085.1| Uracil-DNA glycosylase superfamily [Catenulispora acidiphila DSM
           44928]
          Length = 244

 Score = 62.1 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 64/198 (32%), Gaps = 36/198 (18%)

Query: 66  QADSIAQKACSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEG 107
                A  A  L  +  +L     C                           I       
Sbjct: 3   PPSEQAPAASDLAAMDRVLCDCRACPRLVAWREEVGRVKRKAFAEQTYWSRPIPGFGPAD 62

Query: 108 QDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQSIEIMRTQIHI------------- 152
             L+I+G  P+    N +G+ F+G ++G++L + L ++ +      +             
Sbjct: 63  ARLLIVGLAPAAHGGNRTGRMFTGDRSGDILVEALHALGLANQPTSVSATDGLELLGVRF 122

Query: 153 SMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQKTY 210
           +      PP N   +  E + CRP ++R++EL+ P  + ++ +G       F   A    
Sbjct: 123 TAPVHCAPPDN-KPTPEERDTCRPWLVRELELMRPSVRAMVVLGAFGWQALFPAIAAAGS 181

Query: 211 QNLGKWSNLCTPHSIIPT 228
             + K   +      +  
Sbjct: 182 WTVPKPRPVFGHGVRVEL 199


>gi|189024056|ref|YP_001934824.1| hypothetical protein BAbS19_I08290 [Brucella abortus S19]
 gi|260545438|ref|ZP_05821179.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|189019628|gb|ACD72350.1| hypothetical protein BAbS19_I08290 [Brucella abortus S19]
 gi|260096845|gb|EEW80720.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
          Length = 220

 Score = 62.1 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 60/195 (30%), Gaps = 20/195 (10%)

Query: 77  LHELKSLLRSFHDC---HL----CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129
           L EL+  +++   C    L         + +C        + I G  P    + +  PF+
Sbjct: 4   LDELRHSIQACRLCRDTPLFPPPLPHEPNPVCIISDT-ARIAICGQAPGIRVHNTSLPFN 62

Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEICRPIIMRQIE 183
             +G+ L + L   +      ++  I  +      +     +L                 
Sbjct: 63  DPSGDRLRQWLGVTREEFYDASRFAIVPMGFCFPGYDKNGGDLPPRRECRQTWHDRVFAA 122

Query: 184 LISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNL--CTPHSIIPTLATVHPQELIQY 240
           +   + +L +G     +   +   +   + +  W +      H+    L   HP    + 
Sbjct: 123 MPQLEFILVVGQYALAYHLPDYRGRNLTETVKNWRHFMETPSHTGRIALPLPHPSW--RN 180

Query: 241 PLI-KKNTWHALITL 254
               K+N W  +  +
Sbjct: 181 SGWLKRNPWFDMEVV 195


>gi|170738143|ref|YP_001779403.1| uracil-DNA glycosylase superfamily protein [Burkholderia
           cenocepacia MC0-3]
 gi|169820331|gb|ACA94913.1| Uracil-DNA glycosylase superfamily [Burkholderia cenocepacia MC0-3]
          Length = 199

 Score = 62.1 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 64/197 (32%), Gaps = 21/197 (10%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L  L + +R+   C   L       + A       ++I+G  P    + SG P+   +G 
Sbjct: 9   LDVLLTEIRACRACEADLPLGPRPVVRA--HRDARILIVGQAPGARVHASGIPWDDASGK 66

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189
            L   L          T+  I  +   +P    +  N     C P+ M ++    P  ++
Sbjct: 67  RLRGWLGVDADTFYDETRFAIVPMGFCYPGRGASGDNPPRPECAPLWMDRLLAELPSVRL 126

Query: 190 LLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247
            L IG   +  F            +  W +          L   HP    +     K + 
Sbjct: 127 TLLIGQYAQRHFLRGARKATLTDTVQTWRDY-----GPAILPLPHPSP--RNQAWFKHHP 179

Query: 248 WHA---LITLKKALKNL 261
           W     +  L++ + +L
Sbjct: 180 WFDAEVVPELRRRIASL 196


>gi|330835236|ref|YP_004409964.1| uracil-DNA glycosylase superfamily protein [Metallosphaera cuprina
           Ar-4]
 gi|329567375|gb|AEB95480.1| uracil-DNA glycosylase superfamily protein [Metallosphaera cuprina
           Ar-4]
          Length = 216

 Score = 62.1 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 65/206 (31%), Gaps = 39/206 (18%)

Query: 75  CSLHELKSLLRSFHDCHLCST----------------SLSTICATQTEGQDLMIIGYTPS 118
             +  L++ L +   C    +                    +     +   L+I+G  P+
Sbjct: 2   NDISFLENRLINCDLCKRLRSFSEYVARFDKRYDEQYWGKPVPGFGDKNAVLLILGLAPA 61

Query: 119 DS-DNISGKPFSG-KTGNMLDKML-------------QSIEIMRTQIHISMISPWHPPGN 163
               N +G+PF+G ++G  + K L             ++  ++   ++++      PP N
Sbjct: 62  AHGGNRTGRPFTGDESGKWVIKGLYELGLSNLKEGKNRNDGLVLKHVYLTNAVSCAPPEN 121

Query: 164 RNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC-TP 222
           +            +      L + + +L +G            +       ++ +L    
Sbjct: 122 KVNMKEIKNCSTNLKFTIEALSNLRSILTLGQVAFRAL-----EIVLNFREQFRHLNVIK 176

Query: 223 HSIIPTLATVHPQELIQYPLIKKNTW 248
                 +++ HP  L       K +W
Sbjct: 177 VCGKYVISSYHPSPL--NTRTGKLSW 200


>gi|328951159|ref|YP_004368494.1| Uracil-DNA glycosylase superfamily [Marinithermus hydrothermalis
           DSM 14884]
 gi|328451483|gb|AEB12384.1| Uracil-DNA glycosylase superfamily [Marinithermus hydrothermalis
           DSM 14884]
          Length = 223

 Score = 62.1 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 59/219 (26%), Gaps = 43/219 (19%)

Query: 80  LKSLLRSFHDCHL------------------CSTSLSTICATQTEGQDLMIIGYTPSDSD 121
           L + L     C                     +     +         ++I G  P    
Sbjct: 7   LHAELERCARCPRLVAWREAVGRAKRRAFRDWTYWARPVPGFGDPNARILIFGLAPGAHG 66

Query: 122 -NISGKPFSGK-TGNMLDKMLQS-------------IEIMRTQIHISMISPWHPPGNRNL 166
            N +G+PF+G  +G  L   L                 +    ++++      PP N   
Sbjct: 67  SNRTGRPFTGDASGAFLYPALWRAGLANQPRATHRGDGLELYGVYVTAAVRCVPPQN-RP 125

Query: 167 SNIEMEICRPIIMRQIE-LISPKILLFIGNKTKNFFF---NNDAQKTYQNLGKWSNLCTP 222
           +  E+  C     R++E L   ++++ +G    +          +      G    L   
Sbjct: 126 TQAELRACADWTRRELELLPKVRVVVALGRIAHDAMLAHFGLKKRAHPFAHGTEHRLPNG 185

Query: 223 HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
                 L + H     Q     + T      +    K L
Sbjct: 186 WV---LLDSYHVS--RQNTNTGRLTVEMFDRVLARAKRL 219


>gi|163803948|ref|ZP_02197778.1| hypothetical protein 1103602000441_AND4_18823 [Vibrio sp. AND4]
 gi|159172249|gb|EDP57149.1| hypothetical protein AND4_18823 [Vibrio sp. AND4]
          Length = 190

 Score = 62.1 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 70/181 (38%), Gaps = 17/181 (9%)

Query: 76  SLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
           SL  L   +R+   C   L   +   + A   +   ++IIG  P    + +  P++  +G
Sbjct: 2   SLEILLEQVRACQICADDLPLGANPVVQA--AKDARVLIIGQAPGTRVHKTSIPWNDPSG 59

Query: 134 NMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--K 188
           + L + L     +     +I I  +   +P    +      + C P   ++I  + P  +
Sbjct: 60  DRLRQWLDIDKDVFYNPNKIAIIPMGFCYPGKGNSGDLPPRKECAPAWHKKILDLLPNIE 119

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247
           + L IG  ++ ++  N  +   Q + +W +          +   HP    +  L  KKN 
Sbjct: 120 LTLLIGQYSQQYYLTNKPKTLTQTVQQWQDWEPDF-----IPLPHPSP--RNTLWLKKNP 172

Query: 248 W 248
           W
Sbjct: 173 W 173


>gi|62289815|ref|YP_221608.1| hypothetical protein BruAb1_0881 [Brucella abortus bv. 1 str.
           9-941]
 gi|237815300|ref|ZP_04594298.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|254697253|ref|ZP_05159081.1| hypothetical protein Babob28_05934 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254730152|ref|ZP_05188730.1| hypothetical protein Babob42_02864 [Brucella abortus bv. 4 str.
           292]
 gi|260757841|ref|ZP_05870189.1| uracil-DNA glycosylase [Brucella abortus bv. 4 str. 292]
 gi|260761664|ref|ZP_05874007.1| uracil-DNA glycosylase [Brucella abortus bv. 2 str. 86/8/59]
 gi|62195947|gb|AAX74247.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
 gi|237790137|gb|EEP64347.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|260668159|gb|EEX55099.1| uracil-DNA glycosylase [Brucella abortus bv. 4 str. 292]
 gi|260672096|gb|EEX58917.1| uracil-DNA glycosylase [Brucella abortus bv. 2 str. 86/8/59]
          Length = 223

 Score = 61.7 bits (148), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 60/195 (30%), Gaps = 20/195 (10%)

Query: 77  LHELKSLLRSFHDC---HL----CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129
           L EL+  +++   C    L         + +C        + I G  P    + +  PF+
Sbjct: 7   LDELRHSIQACRLCRDTPLFPPPLPHEPNPVCIISDT-ARIAICGQAPGIRVHNTSLPFN 65

Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEICRPIIMRQIE 183
             +G+ L + L   +      ++  I  +      +     +L                 
Sbjct: 66  DPSGDRLRQWLGVTREEFYDASRFAIVPMGFCFPGYDKNGGDLPPRRECRQTWHDRVFAA 125

Query: 184 LISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNL--CTPHSIIPTLATVHPQELIQY 240
           +   + +L +G     +   +   +   + +  W +      H+    L   HP    + 
Sbjct: 126 MPQLEFILVVGQYALAYHLPDYRGRNLTETVKNWRHFMETPSHTGRIALPLPHPSW--RN 183

Query: 241 PLI-KKNTWHALITL 254
               K+N W  +  +
Sbjct: 184 SGWLKRNPWFDMEVV 198


>gi|158319881|ref|YP_001512388.1| uracil-DNA glycosylase superfamily protein [Alkaliphilus oremlandii
           OhILAs]
 gi|158140080|gb|ABW18392.1| Uracil-DNA glycosylase superfamily [Alkaliphilus oremlandii OhILAs]
          Length = 199

 Score = 61.7 bits (148), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 55/168 (32%), Gaps = 14/168 (8%)

Query: 77  LHELKSLLRSFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           L  L++ +     C          +         +M IG  PS   + +G+PF+  +G  
Sbjct: 10  LTVLQNQILQCRLCQDTFGFEPQPVI-QGNRRSKIMQIGQAPSKKVHETGRPFNDASGKK 68

Query: 136 LDKML----QSIEIMRTQIHISMISPWHPPGNRNLSNIEM--EICRPIIMRQIELISPKI 189
           L        +         +I  I+  +P  N    +           + +++EL+  +I
Sbjct: 69  LRNEWYCISEEDFYNPDNFYIGSIAHCYPGKNPKGGDRRPPKVCAEQWLRKELELVENEI 128

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237
            + IG     FFF  +   +      + +          L   HP  L
Sbjct: 129 YILIGGFAAEFFFPGEKLSSL----VFEDRIINGKTAYILP--HPSPL 170


>gi|237808532|ref|YP_002892972.1| hypothetical protein Tola_1776 [Tolumonas auensis DSM 9187]
 gi|237500793|gb|ACQ93386.1| conserved hypothetical protein [Tolumonas auensis DSM 9187]
          Length = 197

 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 58/182 (31%), Gaps = 22/182 (12%)

Query: 80  LKSLLRSFHDCHLCSTSLSTICA-----TQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L+SLL     C LC  +                  ++I G  P    + +G PF+  +G+
Sbjct: 4   LESLLTDVRACTLC--AKHLPLGPHPVLQMQASAQILIAGQAPGRKVHETGIPFNDASGD 61

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR--QIELISPKI 189
            L   L   + +    +QI I  +    P   ++        C P         L + K+
Sbjct: 62  RLRSWLGISREVFYDASQIAILPMGFCFPGTGKSGDLPPRPECAPAWRAPLLSHLKNLKL 121

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIK 244
            L IG     +   N+     + +  W            +   HP       L + P  +
Sbjct: 122 ALVIGQYAMAYHLPNETGTLTEIVQSWHKYWPH-----IVPLPHPSPRNNFWLKRNPWFE 176

Query: 245 KN 246
           K 
Sbjct: 177 KE 178


>gi|53802756|ref|YP_115479.1| uracil-DNA glycosylase [Methylococcus capsulatus str. Bath]
 gi|53756517|gb|AAU90808.1| uracil-DNA glycosylase [Methylococcus capsulatus str. Bath]
          Length = 184

 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 52/133 (39%), Gaps = 11/133 (8%)

Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM----RTQIHISMISPWHPPGNRN-- 165
           ++G  P   +   G+PF+   G  + +   +I +     R +++++ +    P  N    
Sbjct: 17  LVGQAPGAKEGALGRPFAWTAGRTMFRWFANIGLDEETFRERVYMAAVCRCFPGKNPKGG 76

Query: 166 ---LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP 222
               +  E+E C   +  +++L+ P +++ +G    + F      +    +GK   +   
Sbjct: 77  DRVPAPQEIERCSVWLRTELDLLRPALIIPVGKLAASRFL--TFGQLGDVVGKRHRVELG 134

Query: 223 HSIIPTLATVHPQ 235
                 +   HP 
Sbjct: 135 GVRTDLIPLPHPS 147


>gi|95930487|ref|ZP_01313223.1| Uracil-DNA glycosylase superfamily [Desulfuromonas acetoxidans DSM
           684]
 gi|95133527|gb|EAT15190.1| Uracil-DNA glycosylase superfamily [Desulfuromonas acetoxidans DSM
           684]
          Length = 225

 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 59/219 (26%), Gaps = 41/219 (18%)

Query: 80  LKSLLRSFHDCHL----------CSTS------LSTICATQTEGQDLMIIGYTPSDSD-N 122
           L  L+     C                         +         + ++G  P     N
Sbjct: 8   LPELI-DCQRCPRLMDYLATLPPKGGRSRDDYWNRPVPGFGDINARIWLVGLAPGAHGAN 66

Query: 123 ISGKPFSGK-TGNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGNRNLSN 168
            + +PF+G   G+ +  +L                 +    ++IS      PPGN     
Sbjct: 67  RTARPFTGDGAGDFMYPLLYQAGLSNQAESESCDDGLRLNDLYISNAVKCVPPGN-KPLA 125

Query: 169 IEMEICRPIIMRQIEL-ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH---- 223
            E   CR  ++R+ +   S +++L +G        +   Q+                   
Sbjct: 126 EEFHQCRDYLLREWKQLTSVRVILALGRDAFISVLHLLKQQGMIKRLADFPFAHNACFEL 185

Query: 224 -SIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
            +    LA  H           + T    + +    + L
Sbjct: 186 TNGQYLLACYHTS--RYNVQTGRMTEALFLEVLNRARQL 222


>gi|89075371|ref|ZP_01161793.1| hypothetical protein SKA34_16480 [Photobacterium sp. SKA34]
 gi|89048920|gb|EAR54489.1| hypothetical protein SKA34_16480 [Photobacterium sp. SKA34]
          Length = 195

 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 63/183 (34%), Gaps = 21/183 (11%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTIC---ATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
             +  L+ L+     C         +       +    L++IG  P    + +G PF+  
Sbjct: 2   KQVDNLRDLIHHCEICK-----DHLVPRPVIQFSSKTRLLLIGQAPGLKVHQTGIPFNDP 56

Query: 132 TGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188
           +G+ L + L   +        I I  +   +P   +         C P   + +  + P 
Sbjct: 57  SGDRLRQWLGLDKDTFYNPEHIAIMPMGLCYPGKGKTGDLPPRPECAPQWHQPVLDLMPN 116

Query: 189 --ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KK 245
             + L IG   +N++  +  +   + + +W      +     +   HP    +  +  KK
Sbjct: 117 IGMTLLIGQYAQNYYLRDKPKTLTETVKQWQQWAPRY-----IPLPHPSP--RNAIWLKK 169

Query: 246 NTW 248
           N W
Sbjct: 170 NPW 172


>gi|116252523|ref|YP_768361.1| hypothetical protein RL2777 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115257171|emb|CAK08266.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 210

 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 59/191 (30%), Gaps = 22/191 (11%)

Query: 77  LHELKSLLRSFHDCH---------LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127
           L  L+  +     C                  + A  +    ++I G  P    + SG P
Sbjct: 7   LETLRREIACCRICRDAPAKGLEYRLPHEPRPV-AVISSSARILIAGQAPGLRVHESGLP 65

Query: 128 FSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSN-IEMEICRPIIMRQIE 183
           F   +G+ L   L   ++    R +  I  +    P  +   ++      C P   +++ 
Sbjct: 66  FDDASGDRLRSWLGVDRASFYDRDRFAIVPMGFCFPGYDDKGADLPPRRECAPFWRQRVI 125

Query: 184 LISPKI--LLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ----- 235
              P+I  +L IG   + +           + +  W +          L   HP      
Sbjct: 126 SAMPQIELVLVIGQYAQAWHMAGERRDNMTETVRAWRDCLLSDRSPVVLPLPHPSWRNSG 185

Query: 236 ELIQYPLIKKN 246
            L + P  +K 
Sbjct: 186 WLKRNPWFEKE 196


>gi|114320517|ref|YP_742200.1| uracil-DNA glycosylase superfamily protein [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114226911|gb|ABI56710.1| Uracil-DNA glycosylase superfamily [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 214

 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 51/177 (28%), Gaps = 31/177 (17%)

Query: 86  SFHDCHLCST------------SLSTICATQTEGQDLMIIGYTPSDSDNISG-KPFSGKT 132
               C   +                 + +       L+++G  P      +  +PF+G  
Sbjct: 10  HCRRCPRLAAFLDQVAADHPAYHARPVPSFGDPAARLLVVGLAPGMHGANASGRPFTGDH 69

Query: 133 -GNMLDKMLQSIEIM-------------RTQIHISMISPWHPPGNRNLSNIEMEICRPII 178
            G +L + L +                      I+      PPGN   +  E+  C P +
Sbjct: 70  AGILLYRTLHACGFANQPNGDHPEDGLVLHDCRITNAVRCLPPGN-KPNRQEVRNCLPYL 128

Query: 179 MRQIELISPKILLF-IGNKTKNF-FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
             ++  + P  ++  +G           D + ++      +        I  L + H
Sbjct: 129 RYELSSLGPGGVVLALGRVAHEAVLLAEDERLSHHPFAHGAEHPLAGGRI-LLDSYH 184


>gi|159184965|ref|NP_354866.2| hypothetical protein Atu1886 [Agrobacterium tumefaciens str. C58]
 gi|159140243|gb|AAK87651.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 208

 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 53/189 (28%), Gaps = 20/189 (10%)

Query: 77  LHELKSLLRSFHDC---HLCSTSLSTICATQTE------GQDLMIIGYTPSDSDNISGKP 127
           L  L+  +     C    L       +               ++I G  P    + +G P
Sbjct: 6   LDCLRGEIARCRLCRDAPLK-GVTDRLPHEPRPVVVISTKARILIAGQAPGLRVHETGIP 64

Query: 128 FSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNL---SNIEMEICRPIIMRQ 181
           F+  +G  L + L   +       +  I  +    P  +                     
Sbjct: 65  FNDASGERLRQWLDVDRETFYDPERFAIVPMGFCFPGYDDKGSDLPPRRECAPLWRERVM 124

Query: 182 IELISPKILLFIGNKTKNFFFNNDAQK-TYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
             +   +++L +G   + F       K   + +  W +    +S    L   HP    + 
Sbjct: 125 AAMPQVELILAVGQYAQAFHLGERRHKTMTETVENWRSYLHANSGPGILPLPHPSW--RN 182

Query: 241 PLI-KKNTW 248
               KKN W
Sbjct: 183 TGWLKKNPW 191


>gi|284042256|ref|YP_003392596.1| uracil-DNA glycosylase-like protein [Conexibacter woesei DSM 14684]
 gi|283946477|gb|ADB49221.1| Uracil-DNA glycosylase-like protein [Conexibacter woesei DSM 14684]
          Length = 218

 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 73/214 (34%), Gaps = 10/214 (4%)

Query: 50  IQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD 109
              +     + +    +   + +    L++L   L+S   C   +     +  +     D
Sbjct: 10  ASNLPESMPVTTDDEIREKYLERAIRELNQLTRELQSCPHCPRGNLM--PVLGSGHPQAD 67

Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI 169
           + +I Y P  S+   G  F G+ G  L K L+ ++I    ++ ++               
Sbjct: 68  VFMIKYQPRPSEVEEGVAFYGRAGGALMKSLKRLQIDPLAVYGTLCVKCPVSDPTLADPA 127

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
            +E        ++ ++ PKI++ +G +  +   N+      + L +       H      
Sbjct: 128 CVERIV----EELAIVQPKIVVVMGEEALH-VVNDLDIPLARELEQVPGA-IQHLTPSVD 181

Query: 230 ATVHPQ--ELIQYPLIKKNTWHALITLKKALKNL 261
           A   P   E +     K+  W A   L     +L
Sbjct: 182 ALYVPNIDEALDEEGAKRAFWRAFKVLGDWYADL 215


>gi|227892387|ref|ZP_04010192.1| uracil DNA glycosylase superfamily protein [Lactobacillus
           salivarius ATCC 11741]
 gi|227865794|gb|EEJ73215.1| uracil DNA glycosylase superfamily protein [Lactobacillus
           salivarius ATCC 11741]
          Length = 198

 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 49/168 (29%), Gaps = 18/168 (10%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
                ++I+G  P      +   ++  +G+ L   L           +  I P       
Sbjct: 36  NPKAKILIVGQAPGQKAQDTHMVWNDLSGDRLRTWLDVSRDEFYNSDLFAIMPMDFYFPG 95

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    +     +  + + ++ + +G+     + N  +        K +++
Sbjct: 96  KGKGGDLPPRKNFAAKWHPKLRKLMPNIELTILVGSYAVKKYLNLKSSA------KLTDI 149

Query: 220 CTPHSII--PTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKN 260
              +          VHP       L + P  ++     L  L   +KN
Sbjct: 150 VKDYQTYLPEYFPLVHPSPRNLIWLKKNPWFEEQVVKDLQKLVSEIKN 197


>gi|302530220|ref|ZP_07282562.1| uracil-DNA glycosylase [Streptomyces sp. AA4]
 gi|302439115|gb|EFL10931.1| uracil-DNA glycosylase [Streptomyces sp. AA4]
          Length = 227

 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 52/197 (26%), Gaps = 39/197 (19%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSL-----------------STICATQTEGQDLMIIGYTP 117
            +   L + L     C                          +     E   L ++G  P
Sbjct: 2   RTFAGLDAQLVQCRACPRLVAWREGVAGTKAAFAGERYWARPVPGFGAEDAALAVVGLAP 61

Query: 118 SDSD-NISGKPFSGKT-GNMLDKMLQS-------------IEIMRTQIHISMISPWHPPG 162
           S    N +G+ F+G   G+ L ++L                 +      +       PP 
Sbjct: 62  SAHGANRTGRMFTGDPSGDFLFRVLYEVGLASQPVSAAIGDGLTLRGTRLVSPVRCAPPE 121

Query: 163 NRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNN-DAQKTYQNLGKW--- 216
           N   +  E + CR  +  +++L+ P  + ++ +G            A        +    
Sbjct: 122 N-KPTPAERDTCRHWLADELDLLRPTLRSIVVLGAFGWQALLPVLSAAGWPVPRPRPAFA 180

Query: 217 SNLCTPHSIIPTLATVH 233
                    +      H
Sbjct: 181 HGARVQFGDLAVFGCYH 197


>gi|254716970|ref|ZP_05178781.1| hypothetical protein BcetM_11214 [Brucella ceti M13/05/1]
          Length = 209

 Score = 61.3 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 60/195 (30%), Gaps = 20/195 (10%)

Query: 77  LHELKSLLRSFHDC---HL----CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129
           L EL+  +++   C    L         + +C        + I G  P    + +  PF+
Sbjct: 3   LDELRHSIQACRLCRDTPLFPPPLPHEPNPVCIISDT-ARIAICGQAPGIRVHNTSLPFN 61

Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEICRPIIMRQIE 183
             +G+ L + L   +      ++  I  +      +     +L                 
Sbjct: 62  DPSGDRLRQWLGVTREEFYDASRFAIVPMGFCFPGYDKNGGDLPPRRECRQTWHDRVFAA 121

Query: 184 LISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNL--CTPHSIIPTLATVHPQELIQY 240
           +   + +L +G     +   +   +   + +  W +      H+    L   HP    + 
Sbjct: 122 MPQLEFILVVGQYALAYHLPDYRGRNLTETVKNWRHFMETPSHTGRIALPLPHPSW--RN 179

Query: 241 PLI-KKNTWHALITL 254
               K+N W  +  +
Sbjct: 180 SGWLKRNPWFDMEVV 194


>gi|222086247|ref|YP_002544779.1| uracil-DNA glycosylase protein [Agrobacterium radiobacter K84]
 gi|221723695|gb|ACM26851.1| uracil-DNA glycosylase protein [Agrobacterium radiobacter K84]
          Length = 209

 Score = 61.3 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 60/210 (28%), Gaps = 29/210 (13%)

Query: 75  CSLHELKSLLRSFHDCHL-----------CSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123
             L  L+  +     C                    + +       ++I G  P    + 
Sbjct: 4   DELQALRDAIALCRICRDTPMRGEAYRLPHEPRPVAVLSE---TARILIAGQAPGLRVHE 60

Query: 124 SGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEICRPI 177
           SG PF+  +G+ L + L   +       +  I  +      +     +L   +       
Sbjct: 61  SGLPFNDASGDRLRQWLGVGRDSFYNPDRFAIVPMGFCFPGYDTAGSDLPPRKECAPLWR 120

Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQ-KTYQNLGKWSNLCTPHSIIPTLATVHPQ- 235
                 +   +++L IG   + +           + + +W      +     L   HP  
Sbjct: 121 QRTLEAMPQIELVLAIGQYAQAWHLGAARMASMTETVSEWRRYLLTNRSPAILPLPHPSW 180

Query: 236 ----ELIQYPLIKKNTWHALITLKKALKNL 261
                L + P  +      L  L++ +K L
Sbjct: 181 RNSGWLKRNPWFEAEL---LPVLQERVKIL 207


>gi|313898532|ref|ZP_07832069.1| uracil-DNA glycosylase, family 4 [Clostridium sp. HGF2]
 gi|312956914|gb|EFR38545.1| uracil-DNA glycosylase, family 4 [Clostridium sp. HGF2]
          Length = 194

 Score = 61.3 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 55/166 (33%), Gaps = 11/166 (6%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             +LK  L +   C               +  ++M I   PS   + SG PF   +G  L
Sbjct: 6   FEQLKRELCACRLCEGKFDHEPRAIFQGAQDANIMQISQAPSIHVHNSGLPFHDASGKKL 65

Query: 137 DKMLQ----SIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC-RPIIMRQIELISPKILL 191
            +       +        +I+ +   +P   +        IC R  +MR+++ +  ++ +
Sbjct: 66  RREWYQIDDAQFYDEHNFYIASMGHCYPGKGKQGDKKPPRICARTWLMRELDAVDNQLYI 125

Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237
            IG       F   + +       + +        P L   HP  L
Sbjct: 126 IIGAMAAKELFPERSFEEL----VFHDQQLRGK--PALVLPHPSPL 165


>gi|220935077|ref|YP_002513976.1| hypothetical protein Tgr7_1908 [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996387|gb|ACL72989.1| conserved hypothetical protein [Thioalkalivibrio sp. HL-EbGR7]
          Length = 218

 Score = 61.3 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/202 (11%), Positives = 50/202 (24%), Gaps = 30/202 (14%)

Query: 86  SFHDCH-----LCSTSLS-------TICATQTEGQDLMIIGYTPSDSDNISG-KPFSGKT 132
               C      L              +         L+I+G  P      +  +PF+G  
Sbjct: 8   HCTRCPRLSGFLADLRQKHPGYHNAPVAPFGDPEARLLIVGLAPGMHGANASGRPFTGDY 67

Query: 133 -GNMLDKMLQSIEIM-------------RTQIHISMISPWHPPGNRNLSNIEMEICRPII 178
            G +L + L                    +   I+      PP N+  +   +     + 
Sbjct: 68  AGILLYETLHRFGFASRPESVSADDGLVLSDCRITNAVKCLPPANKPETGEVVCCNDYLA 127

Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238
           +    L    ++L +G    N        K   +             +  + + H     
Sbjct: 128 VELRGLPRDAVVLALGTIAHNAVLRALGIKASAHRFG-HGAEHELDGLTLIDSYHCS--R 184

Query: 239 QYPLIKKNTWHALITLKKALKN 260
                ++ T      +   ++ 
Sbjct: 185 YNTQTRRLTPEMFQAVFARIRE 206


>gi|167647292|ref|YP_001684955.1| uracil-DNA glycosylase superfamily protein [Caulobacter sp. K31]
 gi|167349722|gb|ABZ72457.1| Uracil-DNA glycosylase superfamily [Caulobacter sp. K31]
          Length = 195

 Score = 61.3 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 63/186 (33%), Gaps = 22/186 (11%)

Query: 77  LHELKSLLRSFHDC--HLCSTSLSTI-CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
           L  L + +R+   C  HL  T    +          ++I G  P    + +G PF+  +G
Sbjct: 3   LDVLLTDIRACRACAPHLPHTPRPVVRVGEG---TRILICGQAPGRLVHETGLPFNDPSG 59

Query: 134 NMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ---IELISP 187
           N L   +   +     R +I ++ ++   P  N    +        ++ RQ     L   
Sbjct: 60  NRLRDWMGIDRETFYGRLEIGVAAMAFCFPGTNPKGGDYPPPARCALLWRQPLLAALPKV 119

Query: 188 KILLFIGNKTKNFFFNND-AQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYP 241
           ++ L +G+  + +  N+         +  W +          L   HP       L + P
Sbjct: 120 ELTLLVGSHAQAWALNSRMKANMTDTVAAWRDFIDEG----VLPLPHPSWRNTGWLKRNP 175

Query: 242 LIKKNT 247
             +   
Sbjct: 176 WFEAEV 181


>gi|329850760|ref|ZP_08265605.1| uracil DNA glycosylase superfamily protein [Asticcacaulis
           biprosthecum C19]
 gi|328841075|gb|EGF90646.1| uracil DNA glycosylase superfamily protein [Asticcacaulis
           biprosthecum C19]
          Length = 220

 Score = 61.3 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 48/176 (27%), Gaps = 28/176 (15%)

Query: 85  RSFHDCHLC-----------STSLS-TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131
                C               T  +            L+I+G  P  +  N +G+ F+G 
Sbjct: 6   SDCRLCPRLVDYRDSNRSTEPTWHNAPAPPFGDRNGRLLIVGLAPGRTGANRTGRVFTGD 65

Query: 132 -TGNMLDKMLQSIEIM-------------RTQIHISMISPWHPPGNRNLSNIEMEICRPI 177
             G ML + L +                      ++      PPGN+ L   E      +
Sbjct: 66  AAGRMLFETLIATGFASGTYRDDGHDDVVLRDCLVTNAVLCAPPGNKPLPAEETTCRPHL 125

Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
                 +   K+++ +G+  +        +      G           +  + + H
Sbjct: 126 AALIKSMPRLKVIVTLGDVARRNLLKALGKPGSAMTGG-HGATAEFDGVRVINSFH 180


>gi|260753798|ref|YP_003226691.1| uracil-DNA glycosylase superfamily [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|258553161|gb|ACV76107.1| Uracil-DNA glycosylase superfamily [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 245

 Score = 61.3 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/238 (12%), Positives = 63/238 (26%), Gaps = 21/238 (8%)

Query: 38  ESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL 97
           +S   +K   ++ +         +P     +        L  L+  L+  H       + 
Sbjct: 6   QSADFQKKYPNSKKDNKENSLSIAPQESMPERDCPLCPRLASLRHDLQKEH--PDWFNA- 62

Query: 98  STICATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEIMRTQI----- 150
             +     +   L I+G  P     N +G+PF+G   G +L + L    +          
Sbjct: 63  -PVPPFGDDDPWLAIVGLAPGMKGANRTGRPFTGDFAGILLYETLLKYGLATGHYQADIN 121

Query: 151 --------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202
                    +       PP N+  +   +      +         K++L +G+       
Sbjct: 122 DGLKLKGTVVLNSVRCLPPQNKPTTQEMVTCRPFFLGAMAHYPHLKVILALGHIAHQTIL 181

Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
                       K          I  + + H          ++ T      +   +  
Sbjct: 182 RAFGITLSSMPFKHGAAYQLSPEIQLVDSYHCS--RYNQNTRRLTEDMFQDVFAKIIE 237


>gi|254477592|ref|ZP_05090978.1| uracil-DNA glycosylase superfamily protein [Ruegeria sp. R11]
 gi|214031835|gb|EEB72670.1| uracil-DNA glycosylase superfamily protein [Ruegeria sp. R11]
          Length = 197

 Score = 61.3 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 60/200 (30%), Gaps = 25/200 (12%)

Query: 78  HELKSLLRSFHDCHLCSTSLST-----ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
             L+  +R+   C     + +T               ++I G  P    + SGKPF+  +
Sbjct: 5   EGLEQDIRACRLCAERFAATATGHRPRPVTWFRSSARILIAGQAPGARVHESGKPFTDPS 64

Query: 133 GNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLS--NIEMEICRPIIMRQIEL-IS 186
           G+ L   L   ++    R  + I  ++   P  +   +              R +     
Sbjct: 65  GDRLRDWLGLSEAQFYDRDLVAIVPMAFCFPGYSAKKADLPPPAICRSTWHDRLMPELSR 124

Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHP-----QELIQYP 241
            ++ + +G     +          +   +W +              HP       L + P
Sbjct: 125 LQLRILVGGYAHGYHLGGKTSVQARV-AQWRDHAPQD-----FPLPHPSWRNTAWLKRNP 178

Query: 242 LIKKNTWHALITLKKALKNL 261
             +      L  L+  ++ +
Sbjct: 179 WFEAEL---LPVLRARVQEV 195


>gi|21220472|ref|NP_626251.1| hypothetical protein SCO1990 [Streptomyces coelicolor A3(2)]
 gi|256788396|ref|ZP_05526827.1| hypothetical protein SlivT_28241 [Streptomyces lividans TK24]
 gi|289772288|ref|ZP_06531666.1| conserved hypothetical protein [Streptomyces lividans TK24]
 gi|5689883|emb|CAB52046.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
 gi|289702487|gb|EFD69916.1| conserved hypothetical protein [Streptomyces lividans TK24]
          Length = 237

 Score = 61.3 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/161 (13%), Positives = 52/161 (32%), Gaps = 36/161 (22%)

Query: 77  LHELKSLLRSFHDCHL------------------CSTSLSTICATQTEGQDLMIIGYTPS 118
           L  L   +     C                     +     +         L+I+G  P+
Sbjct: 6   LSVLDRRIEGCRACPRLVEWREEVARTKRAAFADWTYWGRPVPGFGPPDARLLIVGLAPA 65

Query: 119 DS-DNISGKPFSG-KTGNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGN 163
               N +G+ F+G ++G++L + L                 +    + ++      PP  
Sbjct: 66  AHGGNRTGRMFTGDRSGDVLYQALYDVGLASQPTAVRVDDGLELYGVRVTSPVHCAPP-A 124

Query: 164 RNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFF 202
              +  E + CR  +++++ L+ P  + ++ +G        
Sbjct: 125 NKPTPAERDTCRSWLVQELGLLRPTLRAVVVLGAFGWQAAL 165


>gi|269105003|ref|ZP_06157699.1| uracil-DNA glycosylase [Photobacterium damselae subsp. damselae CIP
           102761]
 gi|268161643|gb|EEZ40140.1| uracil-DNA glycosylase [Photobacterium damselae subsp. damselae CIP
           102761]
          Length = 195

 Score = 61.3 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 65/202 (32%), Gaps = 32/202 (15%)

Query: 81  KSLLRSFHDCHLCSTSLSTIC---ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
           ++L+     C +C   L          ++   ++IIG  P +  +  G+ F   +G+ L 
Sbjct: 4   ENLVHRIRQCQICKGKLPYPPKPLIQASDKAKILIIGQAPGEKTHFKGRVFDDVSGDRLR 63

Query: 138 KMLQSIEIMRTQIHISMISP---WHP---------PGNRNLSNIEMEICRPIIMRQIELI 185
             L           I  I P    +P          G++           PI++ Q+   
Sbjct: 64  AWLGVDRETFYNPDIFNIVPMGFCYPGTIIRNGKRAGDKPPRPECRATWHPILLPQLT-- 121

Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQY 240
             ++++ +GN    ++                N       I  L   HP       L ++
Sbjct: 122 QVELVILMGNYAIEYYLKQKKLSVTDA---VFNQDHHKDNIFVLP--HPSPRNNIWLAKH 176

Query: 241 PLIKKNTWHALI-TLKKALKNL 261
           P         ++  LK+ +  L
Sbjct: 177 PQ----FEQDILPKLKQKVAQL 194


>gi|300023757|ref|YP_003756368.1| uracil-DNA glycosylase superfamily [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299525578|gb|ADJ24047.1| Uracil-DNA glycosylase superfamily [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 219

 Score = 61.3 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 46/182 (25%), Gaps = 33/182 (18%)

Query: 82  SLLRSFHDCH-LCSTSL-----------STICATQTEGQDLMIIGYTPSDSD-NISGKPF 128
                   C  L +                + +       L+I+G  P  +  N +G+PF
Sbjct: 13  EAPVKCGRCPRLVAYRRDNEAKEPSWFNGAVPSFGDPKARLLIVGLAPGRNGANRTGRPF 72

Query: 129 SGKT-GNMLDKMLQSIEIMRTQ-------------IHISMISPWHPPGNRNLSNIEMEIC 174
           +G   G++L   L +    R                 I+      PP N+          
Sbjct: 73  TGDYAGDLLYATLLAYGFARGNYQARSDDGLKLVDCMITNAVRCVPPENKPEPKEIATCR 132

Query: 175 RPIIMRQIELISPKILLFIGNKTKNFF---FNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231
                R   L   +I+L +G    +                 G    +           +
Sbjct: 133 PFFQSRLGHLPRMEIMLALGRIAHDQVLTTLGKRKALFPFAHGARHEIEPGRV---LFDS 189

Query: 232 VH 233
            H
Sbjct: 190 FH 191


>gi|301299401|ref|ZP_07205681.1| uracil-DNA glycosylase, family 4 [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300853007|gb|EFK80611.1| uracil-DNA glycosylase, family 4 [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 198

 Score = 61.3 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 49/168 (29%), Gaps = 18/168 (10%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
                ++I+G  P      +   ++  +G+ L   L           +  I P       
Sbjct: 36  NPKAKILIVGQAPGQKAQDTHMVWNDLSGDRLRTWLDVSRDEFYNSDLFAIMPMDFYFPG 95

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    +     +  + + ++ + +G+     + N  +        K +++
Sbjct: 96  KGKGGDLPPRKNFAAKWHPKLRKLMPNIELTILVGSYAVKKYLNLKSSA------KLTDI 149

Query: 220 CTPHSII--PTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKN 260
              +          VHP       L + P  ++     L  L   +KN
Sbjct: 150 VKDYQTYLPEYFPLVHPSPRNLIWLKKNPWFEEQVVKDLQKLVSEIKN 197


>gi|163734115|ref|ZP_02141556.1| uracil-DNA glycosylase, putative [Roseobacter litoralis Och 149]
 gi|161392651|gb|EDQ16979.1| uracil-DNA glycosylase, putative [Roseobacter litoralis Och 149]
          Length = 199

 Score = 61.3 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 63/197 (31%), Gaps = 23/197 (11%)

Query: 80  LKSLLRSFHDCHLCSTSLSTIC-----ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L+  +R    C     + +T       A       ++I G  P    + SGKPFS  +G 
Sbjct: 2   LQDQIRDCRLCAERFAATATAHEPRPVAWFEPQARVLIAGQAPGMRVHKSGKPFSDPSGE 61

Query: 135 MLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEICRPIIMRQIELISPK 188
            L   +   + +   R Q+ I  ++     +     +L    +            L    
Sbjct: 62  RLRSWMGVSEQVFYDRAQVAIVPMAFCFPGYSASGSDLPPPPICAQTWHDKVTAALPHIG 121

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247
           + L +G+    +     +  T        +       I  L   HP    +     KKN 
Sbjct: 122 LTLIVGSYAMKYHLGLKSSLTQA----VHSWKDRDEDIFVLP--HPSW--RNTGWLKKNP 173

Query: 248 W--HALI-TLKKALKNL 261
           W    +   L+  LK++
Sbjct: 174 WFEEEVQPRLRSRLKDV 190


>gi|217422510|ref|ZP_03454013.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei
           576]
 gi|254185859|ref|ZP_04892377.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|157933545|gb|EDO89215.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|217394741|gb|EEC34760.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei
           576]
          Length = 224

 Score = 61.3 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 75/221 (33%), Gaps = 21/221 (9%)

Query: 53  ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDL 110
           ++  R+  SP+     S   +   L  L   +R+   C  HL       + A    G  +
Sbjct: 1   MSPKRNAPSPVRNGTPSKPTRHARLDALLREIRACSVCAPHLPCGPRPVVRA--HPGARI 58

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLS 167
           +I+G  P    + SG P+   +G  L   L    +     +   I  +   +P    +  
Sbjct: 59  LIVGQAPGARVHASGIPWDDASGKRLRAWLNVDDATFYDESLFAIVPMGFCYPGRGASGD 118

Query: 168 NIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHS 224
           N     C P+ + ++    P  ++ L IG   +  F     + T  + +  W        
Sbjct: 119 NPPRPECAPLWLDKLLAELPDIRLTLLIGQYAQRRFLGARRKSTLTETVRAWPEYAPEF- 177

Query: 225 IIPTLATVHPQELIQYPLI-KKNTWHA---LITLKKALKNL 261
               +   HP    +     K++ W     L  L+  +  L
Sbjct: 178 ----IPLPHPSP--RNQGWLKQHPWFDADVLPALRDRVAEL 212


>gi|90581307|ref|ZP_01237104.1| hypothetical protein VAS14_19126 [Vibrio angustum S14]
 gi|90437546|gb|EAS62740.1| hypothetical protein VAS14_19126 [Vibrio angustum S14]
          Length = 195

 Score = 61.3 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 63/183 (34%), Gaps = 21/183 (11%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTIC---ATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
             +  L+ L+     C         +       +    L++IG  P    + +G PF+  
Sbjct: 2   KQVDNLRDLIHLCEICK-----DHLVPRPVIQFSSKARLLLIGQAPGLKVHQTGIPFNDP 56

Query: 132 TGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188
           +G+ L + L   +        I I  +   +P   +         C P   + +  + P 
Sbjct: 57  SGDRLRQWLGLDKDTFYNPEHIAIMPMGLCYPGKGKTGDLPPRSECAPQWHQPVLDLMPN 116

Query: 189 --ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KK 245
             + L IG   +N++  +  +   + + +W      +     +   HP    +  +  KK
Sbjct: 117 IGMTLLIGQYAQNYYLQDKPKTLTETVKQWQQWAPRY-----IPLPHPSP--RNAIWLKK 169

Query: 246 NTW 248
           N W
Sbjct: 170 NPW 172


>gi|17987380|ref|NP_540014.1| Uracil-DNA glycosylase [Brucella melitensis bv. 1 str. 16M]
 gi|23501755|ref|NP_697882.1| hypothetical protein BR0869 [Brucella suis 1330]
 gi|161618829|ref|YP_001592716.1| hypothetical protein BCAN_A0883 [Brucella canis ATCC 23365]
 gi|163843140|ref|YP_001627544.1| hypothetical protein BSUIS_A0907 [Brucella suis ATCC 23445]
 gi|225852381|ref|YP_002732614.1| hypothetical protein BMEA_A0907 [Brucella melitensis ATCC 23457]
 gi|254689120|ref|ZP_05152374.1| hypothetical protein Babob68_02830 [Brucella abortus bv. 6 str.
           870]
 gi|254693603|ref|ZP_05155431.1| hypothetical protein Babob3T_02844 [Brucella abortus bv. 3 str.
           Tulya]
 gi|254701634|ref|ZP_05163462.1| hypothetical protein Bsuib55_12361 [Brucella suis bv. 5 str. 513]
 gi|254706920|ref|ZP_05168748.1| hypothetical protein BpinM_08026 [Brucella pinnipedialis
           M163/99/10]
 gi|254709972|ref|ZP_05171783.1| hypothetical protein BpinB_06797 [Brucella pinnipedialis B2/94]
 gi|254713972|ref|ZP_05175783.1| hypothetical protein BcetM6_11571 [Brucella ceti M644/93/1]
 gi|256031465|ref|ZP_05445079.1| hypothetical protein BpinM2_12564 [Brucella pinnipedialis
           M292/94/1]
 gi|256044543|ref|ZP_05447447.1| hypothetical protein Bmelb1R_08603 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256060970|ref|ZP_05451128.1| hypothetical protein Bneo5_11496 [Brucella neotomae 5K33]
 gi|256113408|ref|ZP_05454257.1| hypothetical protein Bmelb3E_11782 [Brucella melitensis bv. 3 str.
           Ether]
 gi|256159591|ref|ZP_05457353.1| hypothetical protein BcetM4_11543 [Brucella ceti M490/95/1]
 gi|256254871|ref|ZP_05460407.1| hypothetical protein BcetB_11360 [Brucella ceti B1/94]
 gi|256257369|ref|ZP_05462905.1| hypothetical protein Babob9C_08414 [Brucella abortus bv. 9 str.
           C68]
 gi|256264120|ref|ZP_05466652.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|256369297|ref|YP_003106805.1| hypothetical protein BMI_I866 [Brucella microti CCM 4915]
 gi|260563896|ref|ZP_05834382.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|260566573|ref|ZP_05837043.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
 gi|260754618|ref|ZP_05866966.1| uracil-DNA glycosylase [Brucella abortus bv. 6 str. 870]
 gi|260883645|ref|ZP_05895259.1| uracil-DNA glycosylase [Brucella abortus bv. 9 str. C68]
 gi|261213868|ref|ZP_05928149.1| uracil-DNA glycosylase [Brucella abortus bv. 3 str. Tulya]
 gi|261222054|ref|ZP_05936335.1| uracil-DNA glycosylase [Brucella ceti B1/94]
 gi|261314385|ref|ZP_05953582.1| uracil-DNA glycosylase [Brucella pinnipedialis M163/99/10]
 gi|261317519|ref|ZP_05956716.1| uracil-DNA glycosylase [Brucella pinnipedialis B2/94]
 gi|261321726|ref|ZP_05960923.1| uracil-DNA glycosylase [Brucella ceti M644/93/1]
 gi|261324972|ref|ZP_05964169.1| uracil-DNA glycosylase [Brucella neotomae 5K33]
 gi|261752186|ref|ZP_05995895.1| uracil-DNA glycosylase [Brucella suis bv. 5 str. 513]
 gi|265988554|ref|ZP_06101111.1| uracil-DNA glycosylase [Brucella pinnipedialis M292/94/1]
 gi|265990968|ref|ZP_06103525.1| uracil-DNA glycosylase [Brucella melitensis bv. 1 str. Rev.1]
 gi|265994805|ref|ZP_06107362.1| uracil-DNA glycosylase [Brucella melitensis bv. 3 str. Ether]
 gi|265998019|ref|ZP_06110576.1| uracil-DNA glycosylase [Brucella ceti M490/95/1]
 gi|294852222|ref|ZP_06792895.1| hypothetical protein BAZG_01141 [Brucella sp. NVSL 07-0026]
 gi|297248218|ref|ZP_06931936.1| hypothetical protein BAYG_01156 [Brucella abortus bv. 5 str. B3196]
 gi|306840362|ref|ZP_07473130.1| Uracil-DNA glycosylase [Brucella sp. BO2]
 gi|17983067|gb|AAL52278.1| hypothetical protein BMEI1097 [Brucella melitensis bv. 1 str. 16M]
 gi|23347683|gb|AAN29797.1| conserved hypothetical protein [Brucella suis 1330]
 gi|161335640|gb|ABX61945.1| hypothetical protein BCAN_A0883 [Brucella canis ATCC 23365]
 gi|163673863|gb|ABY37974.1| hypothetical protein BSUIS_A0907 [Brucella suis ATCC 23445]
 gi|225640746|gb|ACO00660.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
 gi|255999457|gb|ACU47856.1| hypothetical protein BMI_I866 [Brucella microti CCM 4915]
 gi|260153912|gb|EEW89004.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|260156091|gb|EEW91171.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
 gi|260674726|gb|EEX61547.1| uracil-DNA glycosylase [Brucella abortus bv. 6 str. 870]
 gi|260873173|gb|EEX80242.1| uracil-DNA glycosylase [Brucella abortus bv. 9 str. C68]
 gi|260915475|gb|EEX82336.1| uracil-DNA glycosylase [Brucella abortus bv. 3 str. Tulya]
 gi|260920638|gb|EEX87291.1| uracil-DNA glycosylase [Brucella ceti B1/94]
 gi|261294416|gb|EEX97912.1| uracil-DNA glycosylase [Brucella ceti M644/93/1]
 gi|261296742|gb|EEY00239.1| uracil-DNA glycosylase [Brucella pinnipedialis B2/94]
 gi|261300952|gb|EEY04449.1| uracil-DNA glycosylase [Brucella neotomae 5K33]
 gi|261303411|gb|EEY06908.1| uracil-DNA glycosylase [Brucella pinnipedialis M163/99/10]
 gi|261741939|gb|EEY29865.1| uracil-DNA glycosylase [Brucella suis bv. 5 str. 513]
 gi|262552487|gb|EEZ08477.1| uracil-DNA glycosylase [Brucella ceti M490/95/1]
 gi|262765918|gb|EEZ11707.1| uracil-DNA glycosylase [Brucella melitensis bv. 3 str. Ether]
 gi|263001752|gb|EEZ14327.1| uracil-DNA glycosylase [Brucella melitensis bv. 1 str. Rev.1]
 gi|263094339|gb|EEZ18184.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|264660751|gb|EEZ31012.1| uracil-DNA glycosylase [Brucella pinnipedialis M292/94/1]
 gi|294820811|gb|EFG37810.1| hypothetical protein BAZG_01141 [Brucella sp. NVSL 07-0026]
 gi|297175387|gb|EFH34734.1| hypothetical protein BAYG_01156 [Brucella abortus bv. 5 str. B3196]
 gi|306289668|gb|EFM60866.1| Uracil-DNA glycosylase [Brucella sp. BO2]
 gi|326408888|gb|ADZ65953.1| conserved hypothetical protein [Brucella melitensis M28]
 gi|326538605|gb|ADZ86820.1| conserved hypothetical protein [Brucella melitensis M5-90]
          Length = 213

 Score = 61.3 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 60/195 (30%), Gaps = 20/195 (10%)

Query: 77  LHELKSLLRSFHDC---HL----CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129
           L EL+  +++   C    L         + +C        + I G  P    + +  PF+
Sbjct: 7   LDELRHSIQACRLCRDTPLFPPPLPHEPNPVCIISDT-ARIAICGQAPGIRVHNTSLPFN 65

Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEICRPIIMRQIE 183
             +G+ L + L   +      ++  I  +      +     +L                 
Sbjct: 66  DPSGDRLRQWLGVTREEFYDASRFAIVPMGFCFPGYDKNGGDLPPRRECRQTWHDRVFAA 125

Query: 184 LISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNL--CTPHSIIPTLATVHPQELIQY 240
           +   + +L +G     +   +   +   + +  W +      H+    L   HP    + 
Sbjct: 126 MPQLEFILVVGQYALAYHLPDYRGRNLTETVKNWRHFMETPSHTGRIALPLPHPSW--RN 183

Query: 241 PLI-KKNTWHALITL 254
               K+N W  +  +
Sbjct: 184 SGWLKRNPWFDMEVV 198


>gi|294787972|ref|ZP_06753216.1| putative uracil-DNA glycosylase, family 4 [Simonsiella muelleri
           ATCC 29453]
 gi|294484265|gb|EFG31948.1| putative uracil-DNA glycosylase, family 4 [Simonsiella muelleri
           ATCC 29453]
          Length = 241

 Score = 61.3 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/257 (14%), Positives = 80/257 (31%), Gaps = 36/257 (14%)

Query: 1   MTSKRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIH 60
           M   R +   + L +   +       +    N E           +    +    I    
Sbjct: 1   MLDSRYIHLHEALGLGAMWLKQSAKIIGQLENRELLSARVPHSPPMVKRKEQSKTISASR 60

Query: 61  SPLVQQADSIAQKACSLHE-----LKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115
             ++Q+ +S   +  +L E     L        + +L   S             +M +  
Sbjct: 61  LAVLQKINSATLQPETLPENNAPILPKYSTDSVENYLKILS--------VPKARVMALSV 112

Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICR 175
             S +D ++G+  SG  G +  KML +I++ +  + +S      P  +       ++   
Sbjct: 113 CASPADVVAGQLLSGSDGELFTKMLAAIQLNQKDVWLSSWLKDLPDFSPKPPTEAVQAAA 172

Query: 176 PIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATV--- 232
           P +  + +L                            +G +       + +P   T    
Sbjct: 173 PRVQAEWQLC-----------GAKALL---------LMGNFFERDDVKAQLPVAPTFYIP 212

Query: 233 HPQELIQYPLIKKNTWH 249
           HPQ ++  P +K++ W 
Sbjct: 213 HPQRILNDPTLKRSAWE 229


>gi|212223829|ref|YP_002307065.1| Uracil-DNA glycosylase [Thermococcus onnurineus NA1]
 gi|212008786|gb|ACJ16168.1| Uracil-DNA glycosylase [Thermococcus onnurineus NA1]
          Length = 248

 Score = 60.9 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 54/154 (35%), Gaps = 36/154 (23%)

Query: 101 CATQTEGQDLMIIGYTPSDSDNISG--KPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158
            A    G  ++++G  P            +   +G +L K L S+ I    ++I+ +   
Sbjct: 104 FANGWVGSGIVLVGEAPGRKGCGLTGICFYRDTSGMLLRKTLFSLGINPDFVYITNVVKC 163

Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF--FNNDAQKTYQNLGKW 216
           +PPGN+     E E+    + R++E++ PK +  IG   +        D           
Sbjct: 164 NPPGNKLKGFDERELSL--LQRELEILKPKAIFAIGRTAEKALKRLGFD----------- 210

Query: 217 SNLCTPHSIIPTLATV--HPQEL----IQYPLIK 244
                        AT   HP       ++ P  +
Sbjct: 211 -------------ATYLRHPAWYVRRGLREPNEE 231


>gi|242399554|ref|YP_002994979.1| Uracil-DNA glycosylase [Thermococcus sibiricus MM 739]
 gi|242265948|gb|ACS90630.1| Uracil-DNA glycosylase [Thermococcus sibiricus MM 739]
          Length = 270

 Score = 60.9 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 49/141 (34%), Gaps = 24/141 (17%)

Query: 101 CATQTEGQDLMIIGYTPSDSDNISG--KPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158
            A    G  ++++G  P            +   +G +L KML S+ +    ++I+ +   
Sbjct: 104 FANGWVGSRIVLVGEAPGRKGCGLTGICFYRDASGMLLRKMLFSLGVNPDFVYITNVVKC 163

Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218
           +PP N+     + E+    + ++++++ PK +  IG              +         
Sbjct: 164 NPPENKFKGFSKKELSL--LEKELKIVQPKGIFAIGRTAYKA-LKKLGVDSTYLR----- 215

Query: 219 LCTPHSIIPTLATVHPQELIQ 239
                         HP   ++
Sbjct: 216 --------------HPAWYLR 222


>gi|144899868|emb|CAM76732.1| Uracil-DNA glycosylase superfamily [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 213

 Score = 60.9 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 49/181 (27%), Gaps = 35/181 (19%)

Query: 84  LRSFHDCHL---CSTSLSTIC---------ATQTEGQDLMIIGYTPSDSD-NISGKPFSG 130
                 C        +              +  +    ++ IG  P     N +G+PF+G
Sbjct: 8   AADCRLCPRLVEYRRANQAAFPDWHNAPVDSFGSLDARILFIGLAPGVRGANRTGRPFTG 67

Query: 131 KT-GNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSNIEMEICRP 176
              G++L   L    + R +               I       PP N      E + C P
Sbjct: 68  DYAGDLLYSSLLKYGLARGEYRADPDDGFELVGARICNAVRCVPPEN-KPLPSEFKACLP 126

Query: 177 IIMRQI-ELISPKILLFIGNKTKNFF---FNNDAQKTYQNLGKWSNLCTPHSIIPTLATV 232
            + +++  + S + L  IG                      G    L      +  + + 
Sbjct: 127 FLSQELAAMPSLRALFAIGRNAHEVALTTLGLKKSAYPFAHGAMHEL---GKGLILVDSY 183

Query: 233 H 233
           H
Sbjct: 184 H 184


>gi|6136303|gb|AAF04324.1| unknown [Bradyrhizobium japonicum]
          Length = 283

 Score = 60.9 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/236 (13%), Positives = 63/236 (26%), Gaps = 40/236 (16%)

Query: 29  DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFH 88
           + P       ++      +S+       R   + L  +A    ++  +L           
Sbjct: 29  NAPRRAIVASARPATTPRNSSSARPRWPRGAMTTLRSEAARSGRQPPTL-------VPDR 81

Query: 89  DCHLC---------STSLSTICA------TQTEGQDLMIIGYTPSDSD-NISGKPFSGKT 132
           DC LC          +    +               L+I+G  P     N +G+PF+G  
Sbjct: 82  DCPLCPRLVAFREGESRARAVVGITPRSPFGDVKARLLIVGLAPGMQGANRTGRPFTGDY 141

Query: 133 -GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPII 178
            G++L   L                        I+      PP N+ L        + + 
Sbjct: 142 AGDLLYATLLEYGFAKGAYQARPDDGLKLVDCRIANAVHCVPPQNKPLPAEINTCRQFLA 201

Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQ-NLGKWSNLCTPHSIIPTLATVH 233
                + + + ++ +G    +        K  Q   G                + H
Sbjct: 202 ANLATMPNLRAIVALGRIAHDTVLKPLNLKGSQAPFG--HGAVHQAGAFRLYDSYH 255


>gi|323498793|ref|ZP_08103779.1| hypothetical protein VISI1226_14811 [Vibrio sinaloensis DSM 21326]
 gi|323316155|gb|EGA69180.1| hypothetical protein VISI1226_14811 [Vibrio sinaloensis DSM 21326]
          Length = 193

 Score = 60.9 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 67/185 (36%), Gaps = 19/185 (10%)

Query: 75  CSLHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
            +L +L + + +   C   L       I A   E   L+IIG  P    + S  P++  +
Sbjct: 2   NTLDQLLTQVTNCRVCQPYLKLGCNPVIQA--NEAAKLLIIGQAPGLKVHHSSIPWNDPS 59

Query: 133 GNMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP-- 187
           G+ L + L           QI I  +   +P   ++      + C P+    I    P  
Sbjct: 60  GDRLRQWLALDKEQFYDPKQIAIMPMGLCYPGKGKSGDLPPRKECAPLWHTPILEQLPNI 119

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPL 242
           ++ L IG   ++++  +  +   + +  W      +  +P     HP       L   P 
Sbjct: 120 EMTLLIGQYAQSYYLQDKPKTLTETVKSWRRWAPHYLPLP-----HPSPRNTLWLRNNPW 174

Query: 243 IKKNT 247
            +++ 
Sbjct: 175 FEEDV 179


>gi|302383922|ref|YP_003819745.1| uracil-DNA glycosylase superfamily [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302194550|gb|ADL02122.1| Uracil-DNA glycosylase superfamily [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 198

 Score = 60.9 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 58/189 (30%), Gaps = 21/189 (11%)

Query: 73  KACSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130
            +  L  + S +R+   C   L  T    +         L+I G  P    + SG PF+ 
Sbjct: 3   TSSDLDAVLSDIRACRACLGELPHTPRPVV--RVFPETRLLICGQAPGRRVHESGLPFTD 60

Query: 131 KTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNI-EMEICRPIIMRQIELIS 186
            +G+ L   +           +I ++  +  +P       +      C  +   ++    
Sbjct: 61  PSGDRLRDWMGVDHETFYADHRIGVAAQAFCYPGTAPKGGDYPPPRRCAELWRPRLLQAL 120

Query: 187 PKI--LLFIGNKTKNFFFNND-AQKTYQNLGKWSNLCTPHSIIPTLATVHP-----QELI 238
           P++   L +G   + +   +         +  W +          L   HP       L 
Sbjct: 121 PRMELTLLVGGHAQVWALGDRAKSTMTDTVRAWRDY-----GPAVLPLPHPSWRNTAWLR 175

Query: 239 QYPLIKKNT 247
           + P  +   
Sbjct: 176 RNPWFEAEV 184


>gi|56461599|ref|YP_156880.1| Uracil-DNA glycosylase [Idiomarina loihiensis L2TR]
 gi|56180609|gb|AAV83331.1| Uracil-DNA glycosylase [Idiomarina loihiensis L2TR]
          Length = 196

 Score = 60.9 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 71/201 (35%), Gaps = 20/201 (9%)

Query: 72  QKACSLHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129
           ++     ++   +R+   C   L   +   +         +++ G  P    + SGKPF 
Sbjct: 4   EEPPHWQQILRDVRACTLCEPELPLGARPVV--QLHPKARILVAGQAPGKRVHASGKPFD 61

Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186
             +G+ L + +   +       ++ I  +   +P   ++        C P    QI    
Sbjct: 62  DPSGDRLRQWMGIDKDTFYNAEELAIIPMGFCYPGTGKSGDLPPRPECAPTWREQILQQL 121

Query: 187 P--KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI- 243
           P  +++L IG   + +      +   + +  W +          L   HP    +  +  
Sbjct: 122 PNLELILAIGQYAQQWHLQEPKRSLTERVRDWRSYWPQ-----LLPLPHPSP--RNNIWM 174

Query: 244 KKNTW---HALITLKKALKNL 261
           K+N W     +  L++ +K L
Sbjct: 175 KRNPWFETEVIPELRQRVKEL 195


>gi|325293288|ref|YP_004279152.1| Uracil-DNA glycosylase [Agrobacterium sp. H13-3]
 gi|325061141|gb|ADY64832.1| Uracil-DNA glycosylase [Agrobacterium sp. H13-3]
          Length = 214

 Score = 60.9 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 56/186 (30%), Gaps = 17/186 (9%)

Query: 77  LHELKSLLRSFHDCH------LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130
           L  L+  +     C               +    +    ++I G  P    + +G PF+ 
Sbjct: 15  LDGLRGAIALCRICRDTPTYGRLPHEPRPVV-VMSTRARILIAGQAPGLRVHETGVPFND 73

Query: 131 KTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNL---SNIEMEICRPIIMRQIEL 184
            +G+ L + L   +       +  I  +    P  +              +        +
Sbjct: 74  ASGDRLRQWLNVDRETFYDPDRFAIVPMGFCFPGYDDKGSDLPPRRECAPQWREKVLAAM 133

Query: 185 ISPKILLFIGNKTKNFFFNNDAQK-TYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI 243
              +++L IG   + F      +K   + +  W +    +S    L   HP    +    
Sbjct: 134 PQVELVLAIGQYAQAFHLGERRRKTMTETVYDWRSYFHSNSGPAILPLPHPSW--RNTGW 191

Query: 244 -KKNTW 248
            +KN W
Sbjct: 192 LRKNPW 197


>gi|126664640|ref|ZP_01735624.1| hypothetical protein MELB17_02340 [Marinobacter sp. ELB17]
 gi|126630966|gb|EBA01580.1| hypothetical protein MELB17_02340 [Marinobacter sp. ELB17]
          Length = 200

 Score = 60.9 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 61/191 (31%), Gaps = 26/191 (13%)

Query: 75  CSLHEL--KSLLRSFHDCHLCSTSLSTICA-----TQTEGQDLMIIGYTPSDSDNISGKP 127
            SL  L  + LL     C LC  + +            E   ++++G  P    + +G P
Sbjct: 3   DSLASLPFEQLLSRVRACTLC--AENLPYGPRPVIQMAESARILVVGQAPGRRVHETGLP 60

Query: 128 FSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRN---LSNIEMEICRPIIMRQ 181
           F+  +G+ L + +   +       Q+ I  +   +P   +N       E        + Q
Sbjct: 61  FNDPSGDRLRQWMGIGREPFYDERQLAILPMGFCYPGSGKNGDLPPRPECAQAWRSALLQ 120

Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----E 236
               +  + L IG    N+   N A     N+  W            +   HP       
Sbjct: 121 RL-PNVAMTLVIGQYAHNWHLANPAGTVTANVQNWRAYWPAQ-----MPMPHPSPRNNLW 174

Query: 237 LIQYPLIKKNT 247
           L + P  +   
Sbjct: 175 LRRNPWFEAEV 185


>gi|306838796|ref|ZP_07471627.1| Uracil-DNA glycosylase [Brucella sp. NF 2653]
 gi|306844075|ref|ZP_07476669.1| Uracil-DNA glycosylase [Brucella sp. BO1]
 gi|306275518|gb|EFM57250.1| Uracil-DNA glycosylase [Brucella sp. BO1]
 gi|306406080|gb|EFM62328.1| Uracil-DNA glycosylase [Brucella sp. NF 2653]
          Length = 210

 Score = 60.9 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 60/195 (30%), Gaps = 20/195 (10%)

Query: 77  LHELKSLLRSFHDC---HL----CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129
           L EL+  +++   C    L         + +C        + I G  P    + +  PF+
Sbjct: 4   LDELRHSIQACRLCRDTPLFPPPLPHEPNPVCIISDT-ARIAICGQAPGIRVHNTSLPFN 62

Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEICRPIIMRQIE 183
             +G+ L + L   +      ++  I  +      +     +L                 
Sbjct: 63  DPSGDRLRQWLGVTREEFYDASRFAIVPMGFCFPGYDKNGGDLPPRRECRQTWHDRVFAA 122

Query: 184 LISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNL--CTPHSIIPTLATVHPQELIQY 240
           +   + +L +G     +   +   +   + +  W +      H+    L   HP    + 
Sbjct: 123 MPQLEFILVVGQYALAYHLPDYRGRNLTETVRNWRHFMETPSHTGRIALPLPHPSW--RN 180

Query: 241 PLI-KKNTWHALITL 254
               K+N W  +  +
Sbjct: 181 SGWLKRNPWFDMEVV 195


>gi|30248935|ref|NP_841005.1| hypothetical protein NE0931 [Nitrosomonas europaea ATCC 19718]
 gi|30138552|emb|CAD84842.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718]
          Length = 217

 Score = 60.9 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 61/222 (27%), Gaps = 35/222 (15%)

Query: 58  HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117
            + SP         + A  L ++K+    +H           +         L+I+G  P
Sbjct: 2   TVSSPFQPDCRDCPRLAQHLDQVKTDYPDYHA--------RPVAPFGDSSAKLLIVGLAP 53

Query: 118 SDSD-NISGKPFSGKT-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPG 162
                N +G+PF+G   G +L + L                    T   I+      PP 
Sbjct: 54  GLHGANRTGRPFTGDYAGILLYRTLHKFGFASHDESVSADDPLHLTDCRITNAVKCLPP- 112

Query: 163 NRNLSNIEMEICRPIIMRQIELIS---PKILLFIGNKTKNFF---FNNDAQKTYQNLGKW 216
                  E+  C   +  +++  +    + LL +G                    + G  
Sbjct: 113 ANKPQPAEIRQCNAFLAVELDNFARNGGQALLALGTIAHQAVLMALGCRNADFPFSHGAI 172

Query: 217 SNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
             +     +     + H          ++ T      +   +
Sbjct: 173 HRVTEELKLYD---SYHCS--RYNTQTRRLTETMFEQIFDRI 209


>gi|254718973|ref|ZP_05180784.1| hypothetical protein Bru83_05439 [Brucella sp. 83/13]
 gi|265983963|ref|ZP_06096698.1| uracil-DNA glycosylase [Brucella sp. 83/13]
 gi|264662555|gb|EEZ32816.1| uracil-DNA glycosylase [Brucella sp. 83/13]
          Length = 213

 Score = 60.9 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 60/195 (30%), Gaps = 20/195 (10%)

Query: 77  LHELKSLLRSFHDC---HL----CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129
           L EL+  +++   C    L         + +C        + I G  P    + +  PF+
Sbjct: 7   LDELRHSIQACRLCRDTPLFPPPLPHEPNPVCIISDT-ARIAICGQAPGIRVHNTSLPFN 65

Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEICRPIIMRQIE 183
             +G+ L + L   +      ++  I  +      +     +L                 
Sbjct: 66  DPSGDRLRQWLGVTREEFYDASRFAIVPMGFCFPGYDKNGGDLPPRRECRQTWHDRVFAA 125

Query: 184 LISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNL--CTPHSIIPTLATVHPQELIQY 240
           +   + +L +G     +   +   +   + +  W +      H+    L   HP    + 
Sbjct: 126 MPQLEFILVVGQYALAYHLPDYRGRNLTETVRNWRHFMETPSHTGRIALPLPHPSW--RN 183

Query: 241 PLI-KKNTWHALITL 254
               K+N W  +  +
Sbjct: 184 SGWLKRNPWFDMEVV 198


>gi|73538349|ref|YP_298716.1| uracil-DNA glycosylase superfamily protein [Ralstonia eutropha
           JMP134]
 gi|72121686|gb|AAZ63872.1| Uracil-DNA glycosylase superfamily [Ralstonia eutropha JMP134]
          Length = 197

 Score = 60.9 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 65/189 (34%), Gaps = 18/189 (9%)

Query: 70  IAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129
            A++   L  L + + +   C L       + A       L+I+G  P    + +G P++
Sbjct: 2   PAKRRSPLDILLNDITACRACDLPYGPRPVVRA--APTARLLIVGQAPGRRVHDTGIPWN 59

Query: 130 GKTGNMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186
             +G+ L   LQ         ++I I  +   +P    +        C P+   Q+    
Sbjct: 60  DPSGDQLRAWLQMTPDEFYDTSRIAIVPMGFCYPGKGASGDLPPRTECAPLWHAQLLATM 119

Query: 187 P--KILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELI 238
           P  ++ L IG   + ++            +  +++       +P     HP       L 
Sbjct: 120 PHIRLTLLIGRYAQGYYLQGRLKPTLTDTVAAYADYLPQFLPLP-----HPSPRNRLWLR 174

Query: 239 QYPLIKKNT 247
           + P  + + 
Sbjct: 175 RNPWFEADV 183


>gi|209964805|ref|YP_002297720.1| uracil-DNA glycosylase superfamily [Rhodospirillum centenum SW]
 gi|209958271|gb|ACI98907.1| uracil-DNA glycosylase superfamily [Rhodospirillum centenum SW]
          Length = 219

 Score = 60.9 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 56/179 (31%), Gaps = 38/179 (21%)

Query: 89  DCHLC---------------STSLSTICATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT 132
           DC LC                 + + + +       L+I+G  P     N +G+PF+G  
Sbjct: 15  DCPLCPRLAAFRQDNRARFPDHANAPVPSFGPASARLLIVGLAPGLHGANRTGRPFTGDY 74

Query: 133 -GNMLDKMLQSIEIMR-------------TQIHISMISPWHPPGNRNLSNIEMEICRPII 178
            G++L + L      R                 I   +   PP N   +  E+  CR  +
Sbjct: 75  AGDLLYETLALFGFARGRYDRRPDDGLELVDCRIVNSARCVPPEN-KPTPAEVATCRRFL 133

Query: 179 MRQIEL-ISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
           + ++E     + ++ +G              A +     G    +      +    + H
Sbjct: 134 IDELEHLPDLRAVVALGTVAHASTVTALGGRASRFPFAHGARHEVRP---GVALFDSYH 189


>gi|209542562|ref|YP_002274791.1| Uracil-DNA glycosylase superfamily [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209530239|gb|ACI50176.1| Uracil-DNA glycosylase superfamily [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 232

 Score = 60.9 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/235 (13%), Positives = 56/235 (23%), Gaps = 25/235 (10%)

Query: 44  KSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHE--LKSLLRSFHDCHLCSTSLSTIC 101
                A+          SP              L E  L +             +   + 
Sbjct: 2   PPRSRALARPAAPSVSTSPGPDIPPRECPACPRLVEYRLANQAAH----PDWWNA--PVP 55

Query: 102 ATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEIM------------- 146
                   L+I+G  P     N +G+PF+G   G +L + L                   
Sbjct: 56  PWGESSASLLIVGLAPGVKGANRTGRPFTGDYAGTLLYETLIEYGFATGRYGADPADGLV 115

Query: 147 RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206
                I       PP N   ++        +      + + K +L +G    N       
Sbjct: 116 LNDCRIVNAVRCVPPANLPQTSEVRTCNHFLRSELTSMPNLKAVLTLGVVAHNATVAACG 175

Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
               +       + T  + +    + H             T      +   L+ L
Sbjct: 176 IPMSRIRFTHGQVQTLPNGLVLTDSYHVS--RYNTNTGVLTTDMFRAVVARLRAL 228


>gi|46203079|ref|ZP_00208786.1| COG1573: Uracil-DNA glycosylase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 148

 Score = 60.9 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 12/121 (9%)

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPG-------NRNLSNIEMEICRPIIMRQIELISP 187
           ML + L+   I R + +++                +   +  E+   R  + R+++ + P
Sbjct: 1   MLSRALEEAGIDRREAYLTNAVKHFKFTLRGKRRIHEKPTAGEVSHYRWWLDRELDFVGP 60

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247
           ++++ +G                +  G                TVHP  L++ P     T
Sbjct: 61  RLVVALGATAVLALTG-KQIPITRARGP----AEFGKPFQGFITVHPSYLLRLPDEAART 115

Query: 248 W 248
           W
Sbjct: 116 W 116


>gi|86358051|ref|YP_469943.1| uracil-DNA glycosylase protein [Rhizobium etli CFN 42]
 gi|86282153|gb|ABC91216.1| probable uracil-DNA glycosylase protein [Rhizobium etli CFN 42]
          Length = 210

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 70/204 (34%), Gaps = 23/204 (11%)

Query: 78  HELKSLLRSFHDC---------HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128
             L+  + +   C         H        + A  +    ++I G  P    + SG PF
Sbjct: 8   ETLRREIAACRICRDAPAGGPEHRLPHEPRPV-AVISARARILIAGQAPGLRVHESGLPF 66

Query: 129 SGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSN-IEMEICRPIIMRQIEL 184
              +G+ L   L   ++    R++  I  +    P  +   ++      C P   +++  
Sbjct: 67  DDASGDRLRSWLGVDRASFYDRSRFAIVPMGFCFPGYDDKGADLPPRRECAPFWRQRVIA 126

Query: 185 ISPKI--LLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241
             P+I  +L IG   + +   +       + +  W            L   HP    +  
Sbjct: 127 AMPQIELVLVIGQYAQAWHMADEKRGNMTETVRAWRASLLSGRSPAVLPLPHPSW--RNS 184

Query: 242 LI-KKNTW--HALI-TLKKALKNL 261
              K+N+W    L+  L++ +K L
Sbjct: 185 GWLKRNSWFEEELLPVLQERVKML 208


>gi|148559096|ref|YP_001258844.1| hypothetical protein BOV_0861 [Brucella ovis ATCC 25840]
 gi|148370353|gb|ABQ60332.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
          Length = 213

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 60/195 (30%), Gaps = 20/195 (10%)

Query: 77  LHELKSLLRSFHDC---HL----CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129
           L EL+  +++   C    L         + +C        + I G  P    + +  PF+
Sbjct: 7   LDELRHSIQACRLCRDTPLFPPPLPHEPNPVCIISDT-ARIAICGQAPGIRVHNTSLPFN 65

Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEICRPIIMRQIE 183
             +G+ L + L   +      ++  I  +      +     +L                 
Sbjct: 66  DPSGDRLRQWLGVTREEFYDASRFAIVPMGFCFPGYDKNGGDLPPRRECRQTWHDRVFAA 125

Query: 184 LISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNL--CTPHSIIPTLATVHPQELIQY 240
           +   + +L +G     +   +   +   + +  W +      H+    L   HP    + 
Sbjct: 126 MPQLEFILVVGQYALAYHLPDYRGRNLMETVKNWRHFMETPSHTGRIALPLPHPSW--RN 183

Query: 241 PLI-KKNTWHALITL 254
               K+N W  +  +
Sbjct: 184 SGWLKRNPWFDMEVV 198


>gi|107026210|ref|YP_623721.1| uracil-DNA glycosylase superfamily protein [Burkholderia
           cenocepacia AU 1054]
 gi|116692606|ref|YP_838139.1| uracil-DNA glycosylase superfamily protein [Burkholderia
           cenocepacia HI2424]
 gi|254248301|ref|ZP_04941621.1| Uracil-DNA glycosylase [Burkholderia cenocepacia PC184]
 gi|105895584|gb|ABF78748.1| Uracil-DNA glycosylase superfamily [Burkholderia cenocepacia AU
           1054]
 gi|116650606|gb|ABK11246.1| Uracil-DNA glycosylase superfamily [Burkholderia cenocepacia
           HI2424]
 gi|124874802|gb|EAY64792.1| Uracil-DNA glycosylase [Burkholderia cenocepacia PC184]
          Length = 199

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 64/197 (32%), Gaps = 21/197 (10%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L  L + +R+   C   L       + A       ++I+G  P    + SG P+   +G 
Sbjct: 9   LDVLLTEIRACRACEADLPLGPRPVVRA--HRDARILIVGQAPGARVHASGIPWDDASGK 66

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189
            L   L          T+  I  +   +P    +  N     C P+ M ++    P  ++
Sbjct: 67  RLRGWLGVDADTFYDETRFAIVPMGFCYPGRGASGDNPPRPECAPLWMDRLLAELPSVRL 126

Query: 190 LLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247
            L IG   +  F            +  W +          L   HP    +     K + 
Sbjct: 127 TLLIGQYAQRHFLRGARKATLTDTVQAWRDY-----GPAILPLPHPSP--RNQAWFKHHP 179

Query: 248 WHA---LITLKKALKNL 261
           W     +  L++ + +L
Sbjct: 180 WFDAEVVPELRRRIASL 196


>gi|16125796|ref|NP_420360.1| hypothetical protein CC_1549 [Caulobacter crescentus CB15]
 gi|221234555|ref|YP_002516991.1| uracil-DNA glycosylase [Caulobacter crescentus NA1000]
 gi|13422934|gb|AAK23528.1| conserved hypothetical protein [Caulobacter crescentus CB15]
 gi|220963727|gb|ACL95083.1| uracil-DNA glycosylase [Caulobacter crescentus NA1000]
          Length = 225

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 60/207 (28%), Gaps = 37/207 (17%)

Query: 88  HDCHLCST-----SLS----------TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131
            DC LC         +             +   +   L+++G  P     N +G+PF+G 
Sbjct: 20  RDCPLCPRLVAYRRENQDFYPDWFNGPAPSFGDKNARLLVVGLAPGRKGANRTGRPFTGD 79

Query: 132 T-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177
             G +L + L                        ++      PPGN+  ++ E      +
Sbjct: 80  YAGALLYETLIKFGFATGQFEARPDDSLQLIDAAVTNAVRCAPPGNKPETSEENACRPFL 139

Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237
             R     + K+++ +G+ ++         K    +                 + H   L
Sbjct: 140 KARLDMFPNLKVIVTLGDVSRRNVLKTLGLKASAGV-PGHGSEFQAGPYRIFNSYHCSRL 198

Query: 238 IQYPLIKKNT---WHAL-ITLKKALKN 260
                  + T   +  L   +K  L  
Sbjct: 199 --NTNTGRLTTPMFEDLFARVKAYLDE 223


>gi|237740268|ref|ZP_04570749.1| DNA polymerase [Fusobacterium sp. 2_1_31]
 gi|229422285|gb|EEO37332.1| DNA polymerase [Fusobacterium sp. 2_1_31]
          Length = 195

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 67/190 (35%), Gaps = 12/190 (6%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             ELK  L S     L                D++ IG  P    +   K  +  +G  L
Sbjct: 8   WEELKFELGSVGIETLPKDKQEIYIGMGNRNADVLFIGNDPKLYLSEDYKVEAQSSGEFL 67

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++     I+    +I+ ++       +N    E +I   ++  QI LISPKI++F+G +
Sbjct: 68  IRLFDLAGIVPEAYYITTLTK-REVKIKNFDEEEKKILLDLLNMQIALISPKIIVFLGKE 126

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIKKNT-----WH 249
                  N      +  GK+         I    T   + +I  +    KK       W 
Sbjct: 127 VAQMI-ENREVNLEKERGKFKKWKGD---IDCYLTYDVETVIKARNESGKKAAVATNFWL 182

Query: 250 ALITLKKALK 259
            +  +K+ L 
Sbjct: 183 DIKNIKERLD 192


>gi|114569513|ref|YP_756193.1| uracil-DNA glycosylase [Maricaulis maris MCS10]
 gi|114339975|gb|ABI65255.1| uracil-DNA glycosylase [Maricaulis maris MCS10]
          Length = 196

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 70/200 (35%), Gaps = 18/200 (9%)

Query: 73  KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
            A  L  L + +R+   C                   ++++G  P    + SGKPF+  +
Sbjct: 2   AAPDLDTLLADIRACRVCAGEMPHEPRPVIQAHRDARILLVGQAPGTRVHASGKPFTDPS 61

Query: 133 GNMLDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIELI 185
           G+ L   L   ++     T++ I  +    P     G       E        +R+  L 
Sbjct: 62  GDRLRDWLQIDEASFYDPTKLAIVPMGFCFPGLDAKGGDLPPRRECAPLWQARVRE-NLP 120

Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-K 244
           + ++ L +G     F+  + A KT     + +    P      L   HP    +     +
Sbjct: 121 NVRLTLLVGQYATRFWLGSRAHKTLTETVRQAERYAPD----FLPLPHPSW--RNSAWLR 174

Query: 245 KNTWHA---LITLKKALKNL 261
           KN W     L  L+  +K+L
Sbjct: 175 KNPWFGEIILPMLRCRMKDL 194


>gi|83949985|ref|ZP_00958718.1| uracil-DNA glycosylase, putative [Roseovarius nubinhibens ISM]
 gi|83837884|gb|EAP77180.1| uracil-DNA glycosylase, putative [Roseovarius nubinhibens ISM]
          Length = 201

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 57/183 (31%), Gaps = 24/183 (13%)

Query: 80  LKSLLRSFHDCHLCSTSLST-----ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L + +R+   C     + +T       A    G  ++I G  P    + SG PF  ++G+
Sbjct: 4   LVTDIRACRICADRFAATATGHRPRPVAWFRPGARIVIAGQAPGARVHDSGLPFDDRSGD 63

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRN-----LSNIEMEICRPIIMRQIELIS 186
            L   L   ++    R +I I  ++   P  +          I        +   +  ++
Sbjct: 64  RLRDWLGLDRATFYDRDRIAIIPMAFCFPGYDAKGSDLPPPPICAATWHDRVFAHLGDVA 123

Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KK 245
               + +G   +       +  T    G W                HP    +     K+
Sbjct: 124 L--TVLVGGYAQRHHLGVRSNVTDTVAG-WRAHAPE-----VFPLPHPSW--RNTAWLKR 173

Query: 246 NTW 248
           N W
Sbjct: 174 NPW 176


>gi|309774684|ref|ZP_07669708.1| phage SPO1 DNA polymerase-related protein [Erysipelotrichaceae
           bacterium 3_1_53]
 gi|308917584|gb|EFP63300.1| phage SPO1 DNA polymerase-related protein [Erysipelotrichaceae
           bacterium 3_1_53]
          Length = 207

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 55/172 (31%), Gaps = 13/172 (7%)

Query: 72  QKACSLHELKSLLRSFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130
           QK  +  +LK  + +   C          +     +   +M I   PS   + SG PF  
Sbjct: 3   QKQDAFEQLKMEICACRLCADTFDHEPRPVF-RGKQKARIMQISQAPSIHVHNSGLPFDD 61

Query: 131 KTGNMLDKMLQ----SIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC-RPIIMRQIELI 185
            +G  L +       +        +I+ +   +P            IC R  + R++E +
Sbjct: 62  ASGKKLRREWYQIEDAQFYDEYSFYITSMGHCYPGKGAQGDKKPPRICARTWLKRELEAV 121

Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237
             ++ + IG       F N + +         +          L   HP  L
Sbjct: 122 DNELYIIIGAMAARELFPNCSFEELVFR----DQRLYGKTALILP--HPSPL 167


>gi|225627358|ref|ZP_03785395.1| DNA glycosylase [Brucella ceti str. Cudo]
 gi|260168599|ref|ZP_05755410.1| hypothetical protein BruF5_09559 [Brucella sp. F5/99]
 gi|261758072|ref|ZP_06001781.1| conserved hypothetical protein [Brucella sp. F5/99]
 gi|225617363|gb|EEH14408.1| DNA glycosylase [Brucella ceti str. Cudo]
 gi|261738056|gb|EEY26052.1| conserved hypothetical protein [Brucella sp. F5/99]
          Length = 213

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/195 (12%), Positives = 59/195 (30%), Gaps = 20/195 (10%)

Query: 77  LHELKSLLRSFHDC---HL----CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129
           L EL+  +++   C    L         + +C        + I G  P    + +  PF+
Sbjct: 7   LDELRHSIQACRLCRDTPLFPPPLPHEPNPVCIISDT-ARIAICGQAPGIRVHNTSLPFN 65

Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEICRPIIMRQIE 183
             +G+ L +     +      ++  I  +      +     +L                 
Sbjct: 66  DPSGDRLRQWFGVTREEFYDASRFAIVPMGFCFPGYDKNGGDLPPRRECRQTWHDRVFAA 125

Query: 184 LISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNL--CTPHSIIPTLATVHPQELIQY 240
           +   + +L +G     +   +   +   + +  W +      H+    L   HP    + 
Sbjct: 126 MPQLEFILVVGQYALAYHLPDYRGRNLTETVKNWRHFMETPSHTGRIALPLPHPSW--RN 183

Query: 241 PLI-KKNTWHALITL 254
               K+N W  +  +
Sbjct: 184 SGWLKRNPWFDMEVV 198


>gi|256823774|ref|YP_003147737.1| Uracil-DNA glycosylase superfamily [Kangiella koreensis DSM 16069]
 gi|256797313|gb|ACV27969.1| Uracil-DNA glycosylase superfamily [Kangiella koreensis DSM 16069]
          Length = 199

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 67/192 (34%), Gaps = 14/192 (7%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            +L   +R+   C       + I    +    +++ G  P    +  GKPF   +G+ L 
Sbjct: 5   QQLLKEIRACTICQDLPLGPNPIL-QFSSKAKILVAGQAPGQITHHKGKPFDDASGDRLR 63

Query: 138 KML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLF 192
             L   +       ++ +  +   +P   ++       IC     ++I    P  ++ L 
Sbjct: 64  DWLGIDRDTFYDPEKLAVVPMGFCYPGKGKSGDLAPKAICAETWRKKILRELPDIELTLV 123

Query: 193 IGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKN 246
           IG    ++   N  ++   + +  W +     +  P +   HP       L + P  ++ 
Sbjct: 124 IGKYAMDWHLPNRQERNLTETVKNWRHYIEQDT--PVMPLPHPSPRNNIWLKKNPWFEEQ 181

Query: 247 TWHALITLKKAL 258
               L  L  AL
Sbjct: 182 LIPELKNLVTAL 193


>gi|157962523|ref|YP_001502557.1| hypothetical protein Spea_2702 [Shewanella pealeana ATCC 700345]
 gi|157847523|gb|ABV88022.1| conserved hypothetical protein [Shewanella pealeana ATCC 700345]
          Length = 200

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 57/190 (30%), Gaps = 31/190 (16%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTI-CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
           L +L++ +     C   L   +   +          ++I G  P    +  G+PF   +G
Sbjct: 7   LVQLQAEIAQCQICSEFLPLGAKPIVQLGAG---AKILIAGQAPGQKTHHKGRPFDDASG 63

Query: 134 NMLDKML---QSIEIMRTQIHISMISPWHP---------PGNRNLSNIEMEICRPIIMRQ 181
             L   L   +          I  +   +P          G++       +  R  +++Q
Sbjct: 64  ERLRAWLGVSREQFYDPELFAILPMGFCYPGSYSASDKQSGDKPPRPECAKQWRKQVLKQ 123

Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----E 236
           +   + ++ L +G     +        T       +N          +   HP       
Sbjct: 124 LP--NVELTLLVGKYAIEWHLKQKISVTDS----VANWQAMWPQTLVMP--HPSPRNNIW 175

Query: 237 LIQYPLIKKN 246
           L + P  ++ 
Sbjct: 176 LKRNPEFEQK 185


>gi|172063426|ref|YP_001811077.1| uracil-DNA glycosylase superfamily protein [Burkholderia ambifaria
           MC40-6]
 gi|171995943|gb|ACB66861.1| Uracil-DNA glycosylase superfamily [Burkholderia ambifaria MC40-6]
          Length = 199

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 56/185 (30%), Gaps = 22/185 (11%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L  L + +R+   C   L       + A       ++I+G  P    + SG P+   +G 
Sbjct: 9   LDVLLTEIRACRACEAELPLGPRPVVRA--HRDARVLIVGQAPGARVHASGIPWDDASGK 66

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIELISP 187
            L   L          T+  I  +   +P     G+         +    ++ ++  I  
Sbjct: 67  RLRDWLGVDADTFYDETRFAIVPMGFCYPGRGASGDNPPRPECAPLWIDRLLAELPSI-- 124

Query: 188 KILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KK 245
           ++ L IG   +  F            +  W +          L   HP    +     K 
Sbjct: 125 RLTLLIGQYAQRHFLRGTRKATLTDTVHAWRDY-----GPDVLPLPHPSP--RNQAWFKH 177

Query: 246 NTWHA 250
           + W  
Sbjct: 178 HPWFD 182


>gi|258620633|ref|ZP_05715670.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258587148|gb|EEW11860.1| conserved hypothetical protein [Vibrio mimicus VM573]
          Length = 190

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 68/180 (37%), Gaps = 17/180 (9%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L  L + +R    C   L   + + +         ++IIG  P    + +  P++  +G+
Sbjct: 2   LESLLAEIRQCKVCEPHLPLGA-NPVI-RAHPAAKILIIGQAPGTKVHNTSIPWNDASGD 59

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189
            L + L   +     + +I I  +   +P   R+      + C P+   ++    P  ++
Sbjct: 60  RLRQWLDLDRDTFYCKEKIAIMPMGLCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQL 119

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248
            L IG   +N++ ++      + + +W            L   HP    +  L  KK+ W
Sbjct: 120 TLLIGQYAQNYYLSDKPATLTETVQQWQRWIPS-----VLPLPHPSP--RNTLWLKKHPW 172


>gi|289581417|ref|YP_003479883.1| uracil-DNA glycosylase [Natrialba magadii ATCC 43099]
 gi|289530970|gb|ADD05321.1| Uracil-DNA glycosylase superfamily [Natrialba magadii ATCC 43099]
          Length = 243

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 56/188 (29%), Gaps = 38/188 (20%)

Query: 86  SFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPS----DSDNISGKPFSGK------TGN 134
               C  L          T     D+++ G  P     D+DN  G  ++GK      +G 
Sbjct: 18  DCQRCPALVEHRTCISWGTGPLDADVLVAGEAPGSGNPDADNWQGGNWTGKAYTSRHSGR 77

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHP-------------------------PGNRNLSNI 169
            + +M++ I       + +      P                         P NR  +  
Sbjct: 78  RIRRMVERIGYG-DDAYYTNAVKCFPANEESRSSTESGEPASTETPRTEDLPDNREPTPT 136

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN-LCTPHSIIPT 228
           E   CR  ++ ++E + P +LL  G          + ++    +      +         
Sbjct: 137 ERANCRTHLVTEVETLEPAVLLATGKHATKSVLAAEERELGGFIETVLEPVRCEQLETWL 196

Query: 229 LATVHPQE 236
           +  +HP  
Sbjct: 197 VPILHPSY 204


>gi|187919401|ref|YP_001888432.1| uracil-DNA glycosylase superfamily [Burkholderia phytofirmans PsJN]
 gi|187717839|gb|ACD19062.1| Uracil-DNA glycosylase superfamily [Burkholderia phytofirmans PsJN]
          Length = 203

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 58/190 (30%), Gaps = 20/190 (10%)

Query: 69  SIAQKACSLHELKSLLRSFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127
           ++  +A SL  L   +R+   C      +   + A  +    ++IIG  P    + SG P
Sbjct: 2   TVTTQATSLDNLLREIRACTLCSPALPHAPRPVLAA-SAQARVLIIGQAPGARVHASGVP 60

Query: 128 FSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP-------GNRNLSNIEMEICRPIIMR 180
           +S  +G  L   L   +          + P           G+              ++ 
Sbjct: 61  WSDASGARLRAWLDVDDTTFYDTSKFAVVPIGFCFPGRGASGDLPPRPECAARWHEELLA 120

Query: 181 QIELISPKILLFIGNKTKNFFFNN-DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
            +  +  ++ L +G   + F             L +W            +   HP    +
Sbjct: 121 HMSSV--RLTLLVGQYAQRFGLGKAFGPTLTDTLVRWREF-----GPQVVPLPHPSP--R 171

Query: 240 YPLI-KKNTW 248
                K+N W
Sbjct: 172 NIAWFKRNPW 181


>gi|118595106|ref|ZP_01552453.1| hypothetical protein MB2181_05520 [Methylophilales bacterium
           HTCC2181]
 gi|118440884|gb|EAV47511.1| hypothetical protein MB2181_05520 [Methylophilales bacterium
           HTCC2181]
          Length = 208

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/165 (13%), Positives = 46/165 (27%), Gaps = 18/165 (10%)

Query: 98  STICATQTEGQDLMIIGYTPSDSDNISG-KPFSGKT-GNMLDKMLQSIEI---------- 145
             + +   +   L+I+G  P         +PF+G   G +L + L               
Sbjct: 30  KPVPSFGDKDPFLLIVGLAPGMHGANQTGRPFTGDHAGIILYETLFKYGFSNKKDSTPND 89

Query: 146 --MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP-KILLFIGNKTKNFFF 202
                   I+      PP N   +  E+  C   +  ++  +    ++L +G        
Sbjct: 90  NLQLVNCRITNAVKCLPPEN-KPNTDEVNNCNVFLTNEVNELRAGSVVLALGLIAHKAIL 148

Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247
            +             N     + +    + H          K+ T
Sbjct: 149 KSQGLIESHFKFSHGNRHILPNGLILYDSYHCS--RYNTQTKRLT 191


>gi|241762217|ref|ZP_04760299.1| Uracil-DNA glycosylase superfamily [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|241373264|gb|EER62883.1| Uracil-DNA glycosylase superfamily [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 212

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/203 (11%), Positives = 50/203 (24%), Gaps = 29/203 (14%)

Query: 85  RSFHDCHLCSTSLS------------TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131
           R    C   ++                +     +   L I+G  P     N +G+PF+G 
Sbjct: 4   RDCPLCPRLASLRHDLQKEHPDWFNAPVPPFGDDDPWLAIVGLAPGMKGANRTGRPFTGD 63

Query: 132 T-GNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSNIEMEICRPI 177
             G +L + L    +                   +       PP N+  +   +      
Sbjct: 64  FAGILLYETLLKYGLATGHYQADINDGLKLKGTVVLNSVRCLPPQNKPTTQEMVTCRPFF 123

Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237
           +         K++L +G+                   K          I  + + H    
Sbjct: 124 LGAMAHYPHLKVILALGHIAHQTILRAFGITLSSMPFKHGAAYQLSPEIQLVDSYHCS-- 181

Query: 238 IQYPLIKKNTWHALITLKKALKN 260
                 ++ T      +   +  
Sbjct: 182 RYNQNTRRLTEDMFQDVFAKIIE 204


>gi|114764515|ref|ZP_01443740.1| uracil-DNA glycosylase, putative [Pelagibaca bermudensis HTCC2601]
 gi|114543082|gb|EAU46101.1| uracil-DNA glycosylase, putative [Roseovarius sp. HTCC2601]
          Length = 198

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 57/201 (28%), Gaps = 25/201 (12%)

Query: 77  LHELKSLLRSFHDCHLCSTSL------STICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130
           L  L   L     C     +         +      G  L+I    P    + + +PF  
Sbjct: 5   LTALADELSRCRLCAERFAATATRHSPRPVVWF-APGARLLIASQAPGMRAHNAARPFDD 63

Query: 131 KTGNMLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEICRPIIMRQIEL 184
            +G  L   L    +    R+++ I  ++     +     +L    +            L
Sbjct: 64  PSGIRLRAWLGLDDATFWDRSRVAIMPMAFCFPGYDAQGSDLPPPPICRHTWHDRLFAAL 123

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI- 243
              ++ L+IG     +        T      W +          +   HP    +     
Sbjct: 124 GEVRLRLYIGGYAHRYHLGVKTGVTETVR-NWRDHLPD-----AIPLPHPSW--RNTAWL 175

Query: 244 KKNTW-HA--LITLKKALKNL 261
           K+N W     L  L+  ++ +
Sbjct: 176 KRNPWFEDELLPVLRARVREV 196


>gi|260432912|ref|ZP_05786883.1| uracil-DNA glycosylase superfamily protein [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260416740|gb|EEX09999.1| uracil-DNA glycosylase superfamily protein [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 206

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 65/201 (32%), Gaps = 27/201 (13%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICA-----TQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
            +L   ++S   C     +  T            G  ++I G  P    + SG+PF+  +
Sbjct: 13  PDLIERIKSCRLCADRFEATPTAHEPRPIVWFQPGARVLIAGQAPGARVHRSGRPFTDPS 72

Query: 133 GNMLDKML---QSIEIMRTQIHISMISPWHPPGNRN-----LSNIEMEICRPIIMRQIEL 184
           G+ L   L   ++    R Q  I  ++   P  +          I  +     +MR++  
Sbjct: 73  GDRLRAWLGVSKTQFYDRAQFAIVPMAFCFPGYDARQADLPPPPICRKTWHAKVMRELGA 132

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI- 243
           +     + +G     F     +  T      W +           A  HP    +     
Sbjct: 133 VPL--TVLVGGHAHRFHLGTRSSVTETVRA-WRDHAP-----RIFALPHPSW--RNTAWL 182

Query: 244 KKNTW---HALITLKKALKNL 261
           KKN W     L  L+  ++ +
Sbjct: 183 KKNPWFEAELLPVLRARVQEV 203


>gi|296328873|ref|ZP_06871384.1| DNA polymerase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
 gi|296153994|gb|EFG94801.1| DNA polymerase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
          Length = 198

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 69/191 (36%), Gaps = 12/191 (6%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             +LK    S  +  L                D++ +G  P        K  S  +G  L
Sbjct: 11  WEDLKFEAGSIGNELLPKDRQEVYIGMGDRNADILFVGNDPKLYLAEDYKVESKSSGAFL 70

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++L  +E +    +I+ +S       +N +  E +    ++  QI LISPKI++F+G +
Sbjct: 71  IRLLDVVEYLPETYYITTLSK-REIKIKNFNEEERKKLIDLLFMQILLISPKIVVFLGKE 129

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIKKNTW-----H 249
                  N         G++         I T  T   + +I  +    KK        +
Sbjct: 130 VAQ-LIENKEIDFDNERGQFKKWRGD---IETYLTYDVETVIKARNDSGKKAAIALNFLN 185

Query: 250 ALITLKKALKN 260
            +  +K+ L N
Sbjct: 186 DMKNIKERLNN 196


>gi|19704236|ref|NP_603798.1| DNA polymerase [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
 gi|19714464|gb|AAL95097.1| DNA polymerase, bacteriophage-type [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
          Length = 195

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 69/191 (36%), Gaps = 12/191 (6%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             +LK    S  +  L                D++ +G  P        K  S  +G  L
Sbjct: 8   WEDLKFEAGSIGNELLPKDRQEVYIGMGDRNADILFVGNDPKLYLAEDYKVESKSSGAFL 67

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++L  +E +    +I+ +S       +N +  E +    ++  QI LISPKI++F+G +
Sbjct: 68  IRLLDVVEYLPETYYITTLSK-REIKIKNFNEEERKKLIDLLFMQILLISPKIVVFLGKE 126

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIKKNTW-----H 249
                  N         G++         I T  T   + +I  +    KK        +
Sbjct: 127 VAQ-LIENKEIDFDNERGQFKKWRGD---IETYLTYDVETVIKARNDSGKKAAIALNFLN 182

Query: 250 ALITLKKALKN 260
            +  +K+ L N
Sbjct: 183 DMKNIKERLNN 193


>gi|124006737|ref|ZP_01691568.1| uracil-DNA glycosylase [Microscilla marina ATCC 23134]
 gi|123987645|gb|EAY27345.1| uracil-DNA glycosylase [Microscilla marina ATCC 23134]
          Length = 195

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 70/199 (35%), Gaps = 24/199 (12%)

Query: 75  CSLHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
            +L  L + +R+   C   L   +   + A       +MIIG  P    + SG P+   +
Sbjct: 2   PALDHLLTEIRTCKVCEENLPLGARPVVSA--QTSAKIMIIGQAPGTKVHASGVPWDDAS 59

Query: 133 GNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189
           G  L + +   +      ++I I  +   +P   +         C P+   ++    P +
Sbjct: 60  GQRLREWMGVDKETFYDTSKIAIMPMGFCYPGRGKGGDLPPRVECAPLWHERLLEQLPDL 119

Query: 190 L--LFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL-IKK 245
           +  L IG   + ++     +K   + +  +      +        VHP    +  +  +K
Sbjct: 120 VLTLLIGQYAQKYYLGKQRKKNLTETVRAYHEYQPDY-----FPLVHPSP--RNLMWQRK 172

Query: 246 NTW-HA-----LITLKKAL 258
           N W        L  + K L
Sbjct: 173 NLWFEDEVVPALQAVVKKL 191


>gi|262172627|ref|ZP_06040305.1| uracil-DNA glycosylase [Vibrio mimicus MB-451]
 gi|261893703|gb|EEY39689.1| uracil-DNA glycosylase [Vibrio mimicus MB-451]
          Length = 190

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 67/180 (37%), Gaps = 17/180 (9%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L  L + +R    C   L   + + +         ++IIG  P    + +  P++  +G+
Sbjct: 2   LESLLAEIRQCKVCEPHLPLGA-NPVI-RAHPAARILIIGQAPGTKVHNTSIPWNDASGD 59

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189
            L + L   +       +I I  +   +P   R+      + C P+   ++    P  ++
Sbjct: 60  RLRQWLDLDRETFYCEEKIAIMPMGLCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQL 119

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248
            L IG   +N++ ++      + + +W            L   HP    +  L  KK+ W
Sbjct: 120 TLLIGQYAQNYYLSDKPATLTETVQQWQRWIPS-----VLPLPHPSP--RNTLWLKKHPW 172


>gi|149913660|ref|ZP_01902193.1| uracil-DNA glycosylase, putative [Roseobacter sp. AzwK-3b]
 gi|149812780|gb|EDM72609.1| uracil-DNA glycosylase, putative [Roseobacter sp. AzwK-3b]
          Length = 195

 Score = 59.8 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 61/202 (30%), Gaps = 25/202 (12%)

Query: 77  LHELKSLLRSFHDCHLCSTSLST------ICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130
           + +L + + S   C        T      +         L+I G  P    + SG PF  
Sbjct: 1   MPDLIADIDSCRLCAARFARTETGHAPRPVVWF-RPAARLLIAGQAPGARVHASGVPFDD 59

Query: 131 KTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSN-IEMEICRPIIMRQIELI- 185
            +G+ L   L   ++    + ++ I  ++   P  +   ++     IC      Q+    
Sbjct: 60  PSGDRLRDWLGLERAEFYDKERVAIVPMAFCFPGYDAKGADLAPPAICGRTWHAQVMARL 119

Query: 186 -SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHP-----QELIQ 239
              ++ + +G   + +      + T                       HP       L +
Sbjct: 120 ARVRLSVIVGGYAQRYHMGAKGRVTETV------AAWRDHAPRVFPLPHPSWRNTAWLKR 173

Query: 240 YPLIKKNTWHALIT-LKKALKN 260
            P  +      L   +++ L +
Sbjct: 174 NPWFEAELLPVLRAQVREVLDD 195


>gi|258624501|ref|ZP_05719445.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|258583198|gb|EEW08003.1| conserved hypothetical protein [Vibrio mimicus VM603]
          Length = 190

 Score = 59.8 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 67/180 (37%), Gaps = 17/180 (9%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L  L + +R    C   L   + + +         ++IIG  P    + +  P++  +G+
Sbjct: 2   LESLLAEIRQCKVCEPHLPLGA-NPVI-RAHPAAKILIIGQAPGTKVHNTSIPWNDASGD 59

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189
            L + L   +       +I I  +   +P   R+      + C P+   ++    P  ++
Sbjct: 60  RLRQWLDLDRDTFYCEEKIAIMPMGLCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQL 119

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248
            L IG   +N++ ++      + + +W            L   HP    +  L  KK+ W
Sbjct: 120 TLLIGQYAQNYYLSDKPATLTETVQQWQRWIPS-----VLPLPHPSP--RNTLWLKKHPW 172


>gi|256845179|ref|ZP_05550637.1| DNA polymerase [Fusobacterium sp. 3_1_36A2]
 gi|256718738|gb|EEU32293.1| DNA polymerase [Fusobacterium sp. 3_1_36A2]
          Length = 195

 Score = 59.8 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 67/191 (35%), Gaps = 12/191 (6%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             +LK    S  +  L                D++ +G  P        K  S  +G  L
Sbjct: 8   WEDLKFEAGSIGNELLPKDRQEVYIGMGDRNADILFVGNDPKLYLAEDYKVESKSSGAFL 67

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++L  +E +    +I+ IS       +N +  E +    ++  QI LISPKI++F+G +
Sbjct: 68  IRLLDVVEYLPETYYITTISK-REIKIKNFNEEERKKLIDLLFMQILLISPKIVVFLGKE 126

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIKKNTW-----H 249
                  N         G++              T   + +I  +    KK        +
Sbjct: 127 VAQ-LIENKEIDFDNERGQFKKWRGDVETYL---TYDVETVIKARNDSGKKAAIALNFLN 182

Query: 250 ALITLKKALKN 260
            +  +K+ L N
Sbjct: 183 DMKNIKERLNN 193


>gi|294782630|ref|ZP_06747956.1| DNA polymerase, bacteriophage-type [Fusobacterium sp. 1_1_41FAA]
 gi|294481271|gb|EFG29046.1| DNA polymerase, bacteriophage-type [Fusobacterium sp. 1_1_41FAA]
          Length = 195

 Score = 59.8 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 67/190 (35%), Gaps = 12/190 (6%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             ELK  L S     L                D++ IG  P    +   K  +  +G  L
Sbjct: 8   WEELKFELGSVGIETLPKDKQEIYIGMGNRNADVLFIGNDPKLYLSEDYKVEAQSSGEFL 67

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++     I+    +I+ ++       +N    E +I   ++  QI LISPKI++F+G +
Sbjct: 68  IRLFDLAGIVPEAYYITTLTK-REVKIKNFDVEEKKILLDLLNMQIALISPKIIVFLGKE 126

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIKKNT-----WH 249
                  N      +  GK+         I    T   + +I  +    KK       W 
Sbjct: 127 VAQMI-ENREVDLEKERGKFKKWKGD---IECYLTYDVETVIKARNESGKKAAVATNFWL 182

Query: 250 ALITLKKALK 259
            +  +K+ L 
Sbjct: 183 DIKNIKERLD 192


>gi|56695852|ref|YP_166203.1| uracil-DNA glycosylase, putative [Ruegeria pomeroyi DSS-3]
 gi|56677589|gb|AAV94255.1| uracil-DNA glycosylase, putative [Ruegeria pomeroyi DSS-3]
          Length = 208

 Score = 59.8 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 61/201 (30%), Gaps = 29/201 (14%)

Query: 80  LKSLLRSFHDCHLCSTSLST------ICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
           L   +R+   C     +  T      +      G  L+I G  P    + SG+PF+  +G
Sbjct: 9   LIERIRACRLCADRFAATHTAHEPRPVVWF-RPGARLLIAGQAPGARVHASGRPFTDPSG 67

Query: 134 NMLDKML---QSIEIMRTQIHISMISPWHPPGNR-----NLSNIEMEICRPIIMRQIELI 185
           + L   L   +     R+++ +  ++   P  N          +  +     +M ++  +
Sbjct: 68  DRLRDWLGIGEETFYDRSRVAVVPMAFCFPGYNSQGADLPPPPVCGKTWHNQVMGELGEM 127

Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQY 240
                + +G     +     +  T                    A  HP       L + 
Sbjct: 128 PLS--VLVGGHALKYHLGARSPVTETV------AAWRDHAPRVFALPHPSWRNTGWLRKN 179

Query: 241 PLIKKNTWHALIT-LKKALKN 260
           P  +      L   +K+ L  
Sbjct: 180 PWFEAELLPVLRARVKEVLNE 200


>gi|295688763|ref|YP_003592456.1| uracil-DNA glycosylase superfamily protein [Caulobacter segnis ATCC
           21756]
 gi|295430666|gb|ADG09838.1| Uracil-DNA glycosylase superfamily [Caulobacter segnis ATCC 21756]
          Length = 194

 Score = 59.8 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 63/184 (34%), Gaps = 21/184 (11%)

Query: 76  SLHELKSLLRSFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           SL  L S + +   C      +   +     E   ++I G  P    + +G PF+  +G 
Sbjct: 2   SLDALLSDIAACRACAPYLPHAPRPV-TRVREETRILIAGQAPGRLVHETGLPFNDPSGV 60

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHP-----PGNRNLSNIEMEICRPIIMRQIELIS 186
            L + +   +     R +I ++ ++   P      G+           R  ++ Q+   +
Sbjct: 61  RLRQWMGIDRETFYGRPEIGVAAMAFCFPGTNPKGGDYPPPPRCAATWRARLLEQLP--N 118

Query: 187 PKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-K 244
            ++ L +G+  + +       +     +  W +          L   HP    +     K
Sbjct: 119 IELTLLVGSYAQAWALPGRTGKTMTDTIAAWRDF-----GPNVLPLPHPSW--RNTAWLK 171

Query: 245 KNTW 248
           +N W
Sbjct: 172 RNPW 175


>gi|282850839|ref|ZP_06260213.1| uracil-DNA glycosylase, family 4 [Lactobacillus gasseri 224-1]
 gi|282557791|gb|EFB63379.1| uracil-DNA glycosylase, family 4 [Lactobacillus gasseri 224-1]
          Length = 112

 Score = 59.8 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 28/68 (41%)

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160
                    LMIIG  P   +  S  PF G +G  L K L SI + R  ++I+      P
Sbjct: 25  FGAGPAHPKLMIIGEAPGREEIESLIPFHGASGKELMKSLASIGLKREDVYITSAVRSRP 84

Query: 161 PGNRNLSN 168
              + + +
Sbjct: 85  YSVKKVFS 92


>gi|323492058|ref|ZP_08097220.1| uracil-DNA glycosylase [Vibrio brasiliensis LMG 20546]
 gi|323313619|gb|EGA66721.1| uracil-DNA glycosylase [Vibrio brasiliensis LMG 20546]
          Length = 195

 Score = 59.8 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 67/177 (37%), Gaps = 19/177 (10%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L EL   +R+   C   L   +   I A  ++   L+IIG  P    + +  P++  +GN
Sbjct: 2   LDELLQQVRACRLCEPELPLGANPIIQA--SKSASLLIIGQAPGTRVHETSIPWNDPSGN 59

Query: 135 MLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK--I 189
            L + L          +++ I  +   +P    +      + C P   + I    P   +
Sbjct: 60  RLREWLDLDSETFYDASKVAIMPMGLCYPGKGNSGDLPPRKECAPQWHKSILDQLPNVGM 119

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYP 241
            L IG   +N++ +N  +   + + +W      +  +P     HP       L + P
Sbjct: 120 TLLIGQYAQNYYLSNKPKTLTETVQQWHRWAPRYLPLP-----HPSPRNTLWLRKNP 171


>gi|295690032|ref|YP_003593725.1| uracil-DNA glycosylase superfamily protein [Caulobacter segnis ATCC
           21756]
 gi|295431935|gb|ADG11107.1| Uracil-DNA glycosylase superfamily [Caulobacter segnis ATCC 21756]
          Length = 225

 Score = 59.8 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 59/209 (28%), Gaps = 41/209 (19%)

Query: 88  HDCHLCST-----SLS----------TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131
            DC LC         +             +   +   L+++G  P     N +G+PF+G 
Sbjct: 20  RDCPLCPRLVAYRRENQDLYPDWFNGPAPSFGDKDARLLVVGLAPGRKGANRTGRPFTGD 79

Query: 132 T-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177
             G +L   L                        ++      PPGN+  ++ E      +
Sbjct: 80  YAGTLLYDTLIKFGFATGKFEARPDDSLNLVGSAVTNAVRCAPPGNKPETSEENNCRPFL 139

Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237
             R     + K ++ +G+ ++         K    +                 + H   L
Sbjct: 140 TTRLEMFPNLKAIVTLGDVSRRNVLKALGLKASAGI-PGHGSEFQAGPYRIFNSYHCSRL 198

Query: 238 ------IQYPLIKKNTWHALITLKKALKN 260
                 +  P+ ++        +K  L  
Sbjct: 199 NTNTGRLTTPMFEEL----FARVKAYLDE 223


>gi|254487601|ref|ZP_05100806.1| uracil-DNA glycosylase superfamily protein [Roseobacter sp. GAI101]
 gi|214044470|gb|EEB85108.1| uracil-DNA glycosylase superfamily protein [Roseobacter sp. GAI101]
          Length = 195

 Score = 59.8 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 65/199 (32%), Gaps = 25/199 (12%)

Query: 79  ELKSLLRSFHDCHLCSTSL------STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
           +++  L++   C     +       + +      G  L+I    P    + +  PF  ++
Sbjct: 3   DIRDRLQACTLCADRFAATATAHRPNPVVWF-QPGARLLIASQAPGLRVHEANTPFWDQS 61

Query: 133 GNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNL---SNIEMEICRPIIMRQIELIS 186
           G  L   L   ++    R+++ I  ++   P  +          +            +  
Sbjct: 62  GKRLRDWLGLDEAAFYDRSRVAIIPMAFCFPGYDTKSSDLPPPPVCARTWRTGALATVPD 121

Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KK 245
            ++ + IG     +    D     + +  W +           A  HP    +     KK
Sbjct: 122 IRLTILIGGHAMRYHL-PDFTTVTRAVADWRDHPPG-----VFALPHPSW--RNTAWLKK 173

Query: 246 NTW--HALI-TLKKALKNL 261
           N W    ++  L+ A+K++
Sbjct: 174 NPWFEEDVLPRLRAAVKDV 192


>gi|71907665|ref|YP_285252.1| uracil-DNA glycosylase superfamily protein [Dechloromonas aromatica
           RCB]
 gi|71847286|gb|AAZ46782.1| Uracil-DNA glycosylase superfamily [Dechloromonas aromatica RCB]
          Length = 215

 Score = 59.8 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 45/154 (29%), Gaps = 19/154 (12%)

Query: 99  TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIE------------ 144
            + A  +   +L+++G  P +   N +G+PF+G   G +L   L                
Sbjct: 34  PVPAFGSLDAELLVVGLGPGEKGANRTGRPFTGDVAGELLYPALHRFGFASSPEPLGSDG 93

Query: 145 -----IMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKN 199
                +  T   I+      PP N+  +    +    +      +   KI++ +G     
Sbjct: 94  WANPTMQLTNCRITNAVRCLPPANKPTTAEIRQCNAHLKAELAAMPKLKIIVVLGAIAHQ 153

Query: 200 FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
                   K                    + + H
Sbjct: 154 ALLWTYGLKAKDLPFGHHVTHKLPDGRTLVTSYH 187


>gi|303235194|ref|ZP_07321813.1| uracil-DNA glycosylase family protein [Finegoldia magna BVS033A4]
 gi|302493681|gb|EFL53468.1| uracil-DNA glycosylase family protein [Finegoldia magna BVS033A4]
          Length = 190

 Score = 59.4 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 65/193 (33%), Gaps = 22/193 (11%)

Query: 80  LKSLLRSFHDCHLCSTS-LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDK 138
           +K L     +  + +   ++ I         ++IIG  P +    +G  F+ K+G  L K
Sbjct: 7   IKKLREDCRN-EIYTNRGINPIF-QLNPKSKILIIGQAPGEKVEETGILFNDKSGENLVK 64

Query: 139 MLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE------LISPKILLF 192
            L   E +        I P          + + +  R  I ++        L   K+ + 
Sbjct: 65  WLGISEDILHSED-FSIIPMDFYYPGKGKSGD-KAPRSFIAKEYHPLLLNELKDIKLTIL 122

Query: 193 IGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKN 246
           IG   + F+  +  +K   + +  +      +         HP       + + P  ++ 
Sbjct: 123 IGAYAQKFYLKDKFKKNLTETVKSYKEFLPEY-----FPIAHPSPLNNRWISKNPFFREE 177

Query: 247 TWHALITLKKALK 259
               L  + K L+
Sbjct: 178 VLPDLKKIVKKLR 190


>gi|261218775|ref|ZP_05933056.1| uracil-DNA glycosylase [Brucella ceti M13/05/1]
 gi|260923864|gb|EEX90432.1| uracil-DNA glycosylase [Brucella ceti M13/05/1]
          Length = 207

 Score = 59.4 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/195 (12%), Positives = 60/195 (30%), Gaps = 20/195 (10%)

Query: 77  LHELKSLLRSFHDC---HL----CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129
           + EL+  +++   C    L         + +C        + I G  P    + +  PF+
Sbjct: 1   MDELRHSIQACRLCRDTPLFPPPLPHEPNPVCIISDT-ARIAICGQAPGIRVHNTSLPFN 59

Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEICRPIIMRQIE 183
             +G+ L + L   +      ++  I  +      +     +L                 
Sbjct: 60  DPSGDRLRQWLGVTREEFYDASRFAIVPMGFCFPGYDKNGGDLPPRRECRQTWHDRVFAA 119

Query: 184 LISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNL--CTPHSIIPTLATVHPQELIQY 240
           +   + +L +G     +   +   +   + +  W +      H+    L   HP    + 
Sbjct: 120 MPQLEFILVVGQYALAYHLPDYRGRNLTETVKNWRHFMETPSHTGRIALPLPHPSW--RN 177

Query: 241 PLI-KKNTWHALITL 254
               K+N W  +  +
Sbjct: 178 SGWLKRNPWFDMEVV 192


>gi|307945356|ref|ZP_07660692.1| uracil-DNA glycosylase superfamily protein [Roseibium sp.
           TrichSKD4]
 gi|307771229|gb|EFO30454.1| uracil-DNA glycosylase superfamily protein [Roseibium sp.
           TrichSKD4]
          Length = 206

 Score = 59.4 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 72/209 (34%), Gaps = 28/209 (13%)

Query: 77  LHELKSLLRSFHDCHLCSTS--LSTICATQTE------GQDLMIIGYTPSDSDNISGKPF 128
           + EL +L+     C +C+ +     +               L I G  P    + SG+PF
Sbjct: 1   MAELPALVEDIRACRICADNPDKLPLPHDPRPVLQVSETARLCICGQAPGTRVHKSGRPF 60

Query: 129 SGKTGNMLDKML---QSIEIMRTQIHISMISPWHP-----PGNRNLSNIEMEICRPIIMR 180
           +  +G+ L   +   + I     ++ I  +    P      G+        +     +  
Sbjct: 61  TDPSGDRLRDWMGIGEDIFYDPQKLAIIPMGFCFPGLDAKGGDLPPRPECRKAWHDDLFE 120

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTP---HSIIPTLATVHPQE 236
              L   +++L IG   + +      +K+  + +  W +       ++    L   HP  
Sbjct: 121 --ALPQIELILVIGQYAQGYHLGKSRKKSLTETVAHWRDFWDECSSNNKPKVLPLPHPSW 178

Query: 237 LIQYPLI-KKNTW--HALI-TLKKALKNL 261
             +     KKN W    L+  LK+ +  L
Sbjct: 179 --RNNAWIKKNPWFETDLLPVLKQEVARL 205


>gi|261250481|ref|ZP_05943056.1| uracil-DNA glycosylase [Vibrio orientalis CIP 102891]
 gi|260939050|gb|EEX95037.1| uracil-DNA glycosylase [Vibrio orientalis CIP 102891]
          Length = 191

 Score = 59.4 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 67/188 (35%), Gaps = 28/188 (14%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQT-----EGQDLMIIGYTPSDSDNISGKPFSGK 131
           L +L   +R+   C       +            E   L+IIG  P    + +  P++  
Sbjct: 2   LDDLLQQVRACRLCE-----ENLPFGANPVIQASESAKLLIIGQAPGTRVHETSIPWNDP 56

Query: 132 TGNMLDKMLQ---SIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIEL 184
           +GN L + L+         +Q+ I  +   +P     G+              ++ Q+  
Sbjct: 57  SGNRLREWLELDKETFYDESQVAIMPMGLCYPGKGTSGDLPPRKECAPKWHQAVLEQLP- 115

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI- 243
            +  + L IG   +N++ N+  +   + + +W      +  +P     HP    +  L  
Sbjct: 116 -NVGMTLLIGQYAQNYYLNDKPKTLTETVQQWQRWAPTYLPLP-----HPSP--RNTLWL 167

Query: 244 KKNTW-HA 250
           KKN W   
Sbjct: 168 KKNPWFED 175


>gi|103487036|ref|YP_616597.1| uracil-DNA glycosylase superfamily protein [Sphingopyxis alaskensis
           RB2256]
 gi|98977113|gb|ABF53264.1| Uracil-DNA glycosylase superfamily [Sphingopyxis alaskensis RB2256]
          Length = 220

 Score = 59.4 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 49/180 (27%), Gaps = 35/180 (19%)

Query: 85  RSFHDCHLCSTSLS------------TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131
           R    C                     + A       L + G  P     N +G+PF+G 
Sbjct: 14  RDCSRCPRLVALRQECQAEHPDWWNAPVPAFGDPDAWLALAGLAPGKHGANRTGRPFTGD 73

Query: 132 T-GNMLDKMLQSIEIMRTQIH-------------ISMISPWHPPGNRNLSNIEMEICRPI 177
             G++L + L +  + R                 I       PP N   +  E+  CRP 
Sbjct: 74  YAGDLLFRALAAFGLSRGDYDARIDDGLTLDGAIIVNSVKCLPPQN-KPAPAEIANCRPF 132

Query: 178 IMRQIEL-ISPKILLFIGNKTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
             RQ+      ++++ +G                      G    L         + + H
Sbjct: 133 FERQLAALPKVRVIVALGRIAHVAVLRATGARLAAHPFAHGAVHALP---DGRHLVDSYH 189


>gi|94497374|ref|ZP_01303945.1| hypothetical protein SKA58_07468 [Sphingomonas sp. SKA58]
 gi|94423237|gb|EAT08267.1| hypothetical protein SKA58_07468 [Sphingomonas sp. SKA58]
          Length = 222

 Score = 59.4 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 49/193 (25%), Gaps = 19/193 (9%)

Query: 56  IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115
           +         +     Q+   L  L+   R+ H       +   + A       + IIG 
Sbjct: 1   MTVESPLASTEPPKDCQRCPRLVALREECRAEH--PDWWNA--PVPAFGDPKARIAIIGL 56

Query: 116 TPSDSD-NISGKPFSGKT-GNMLDKMLQSIEIMRTQI-------------HISMISPWHP 160
            P     N +G+PF+G   G++L   L    +                   I       P
Sbjct: 57  APGRQGANRTGRPFTGDYAGDLLFATLARHGLAEGSYEARPDDGLVLRDVIIINSVKCLP 116

Query: 161 PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220
           P N+            +      L + +  + +G             K  +         
Sbjct: 117 PQNKPEPAEIHNCRPFLADGVAALPNARTFIALGQIAHQSAVKVLGGKLPKARFAHLAEH 176

Query: 221 TPHSIIPTLATVH 233
                   + + H
Sbjct: 177 RMPDGRILIDSYH 189


>gi|194292281|ref|YP_002008188.1| hypothetical protein RALTA_B1539 [Cupriavidus taiwanensis LMG
           19424]
 gi|193226185|emb|CAQ72134.1| conserved hypothetical protein; Uracil-DNA glycosylase superfamily
           [Cupriavidus taiwanensis LMG 19424]
          Length = 210

 Score = 59.4 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 74/201 (36%), Gaps = 19/201 (9%)

Query: 72  QKACSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129
           ++  +L  L + +R+   C  HL       + A       ++I+G  P    + +G P++
Sbjct: 10  RQPAALEALLAEVRACRACAQHLPLGPRPVVRAD--AAARILIVGQAPGTRVHETGIPWN 67

Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186
             +G  L + L    +     +Q  I  +   +P   ++  N     C P+ M ++    
Sbjct: 68  DASGERLRQWLGVDDATFCDASQFAIIPMGLCYPGRGKSGDNPPRPECAPLWMDRLLAQL 127

Query: 187 PKI--LLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI 243
           P I   L +G   +  F     + T  + +  W +          +   HP      P  
Sbjct: 128 PSIALTLLVGQYAQRHFLGARRKPTLTETVRAWRDYAPAF-----IPLPHPSP-RNQPWF 181

Query: 244 KKNTW---HALITLKKALKNL 261
           +++ W     L  L++ +  +
Sbjct: 182 RQHPWFEAEVLPMLRERVARI 202


>gi|85704398|ref|ZP_01035500.1| uracil-DNA glycosylase, putative [Roseovarius sp. 217]
 gi|85670806|gb|EAQ25665.1| uracil-DNA glycosylase, putative [Roseovarius sp. 217]
          Length = 195

 Score = 59.4 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 64/196 (32%), Gaps = 23/196 (11%)

Query: 79  ELKSLLRSFHDCHLCSTSLSTICA-----TQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
           +L S +R+   C     +  T  +            L+I G  P    + SGKPF   +G
Sbjct: 3   DLPSEIRACRLCADRFAASETAHSPRPVVWFQPSARLLIAGQAPGLRVHQSGKPFDDPSG 62

Query: 134 NMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC---RPIIMRQIELISP 187
           + L   L         ++++ I  ++   P  +   S++                 L + 
Sbjct: 63  DRLRNWLGLSPCEFYDKSRVAIVPMAFCFPGYDAKGSDLPPPRICGKTWHARVMQALDNV 122

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKN 246
           K+ + +G     +          Q +  W +       +P     HP    +     +K+
Sbjct: 123 KLTVLVGGYAHKYHLGVKTGV-TQTVEAWRDHAPRIFTLP-----HPSW--RNTAWLRKH 174

Query: 247 TW---HALITLKKALK 259
            W     L  L+  ++
Sbjct: 175 PWFEAEVLPELRAQIQ 190


>gi|254254134|ref|ZP_04947451.1| Uracil-DNA glycosylase [Burkholderia dolosa AUO158]
 gi|124898779|gb|EAY70622.1| Uracil-DNA glycosylase [Burkholderia dolosa AUO158]
          Length = 206

 Score = 59.4 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 62/200 (31%), Gaps = 25/200 (12%)

Query: 76  SLHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
           SL  L + +R+   C   L       + A       ++I+G  P    + SG P+   +G
Sbjct: 8   SLDVLLTEIRACRACEADLPLGPRPVVRA--HRDARILIVGQAPGARVHASGIPWDDASG 65

Query: 134 NMLDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIELIS 186
             L   L          T+  I  +   +P     G+         +    ++ ++  I 
Sbjct: 66  KRLRDWLGVDADTFYDDTRFAIVPMGFCYPGRGAGGDNPPRPECAALWLDRLLAELPSI- 124

Query: 187 PKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-K 244
            ++ L IG   +  F            +  W +          L   HP    +     K
Sbjct: 125 -RLTLLIGQYAQRHFLRTARKATLTDTVRAWRDY-----GADVLPLPHPSP--RNQAWFK 176

Query: 245 KNTWHALI---TLKKALKNL 261
            + W        L++ +  L
Sbjct: 177 HHPWFDAQVVPELRRRVAPL 196


>gi|167645686|ref|YP_001683349.1| uracil-DNA glycosylase superfamily protein [Caulobacter sp. K31]
 gi|167348116|gb|ABZ70851.1| Uracil-DNA glycosylase superfamily [Caulobacter sp. K31]
          Length = 225

 Score = 59.4 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/176 (14%), Positives = 50/176 (28%), Gaps = 31/176 (17%)

Query: 88  HDCHLCST-----SLS----------TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131
            DC LC         +             +   +   L+++G  P     N +G+PF+G 
Sbjct: 20  RDCPLCPRLVAYRRENQDLYPDWFNGPAPSFGDKDARLLVVGLAPGRKGANRTGRPFTGD 79

Query: 132 T-GNMLDKMLQSIEIMRTQIH-------------ISMISPWHPPGNRNLSNIEMEICRPI 177
             G +L   L        +               ++      PPGN+  ++ E      +
Sbjct: 80  YAGTLLYDTLIKYGFATGKFEARPDDSLKLIGSAVTNAVRCAPPGNKPETSEENNCRPFL 139

Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
             R       K ++ +G+ ++         K    +                 + H
Sbjct: 140 TARLEMFPQLKAIVTLGDVSRRNLLKALGLKASAGV-PGHGSEFQAGPYRVFNSYH 194


>gi|17546048|ref|NP_519450.1| hypothetical protein RSc1329 [Ralstonia solanacearum GMI1000]
 gi|17428344|emb|CAD15031.1| probable uracil-dna glycosylase protein [Ralstonia solanacearum
           GMI1000]
          Length = 198

 Score = 59.4 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 57/191 (29%), Gaps = 22/191 (11%)

Query: 78  HELKSLLRSFHDCHLCSTS-----LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
               S L     C LC  +        + A       ++I+G  P    + +G P++ ++
Sbjct: 4   AAFASCLHDIRACRLCEGALPHEPRPVVLAD--RRARVLIVGQAPGRIVHETGIPWNDRS 61

Query: 133 GNMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP-- 187
           G+ L + L+          +I +  +    P    N        C P   R +    P  
Sbjct: 62  GDRLREWLRIGYDAFYADRRIAVVPMGFCFPGTGPNGDLPPRPACAPQWHRPLLTAMPDL 121

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQ---NLGKWSNLCTPHSIIPTLATVHPQELIQYPLI- 243
           K+ L +G   + ++ +             G   +              HP    +     
Sbjct: 122 KLALLVGGYAQRYYLDVPRGMPLTEVVRRGPVRDAE----GRVLFPLPHPSP--RNLAWF 175

Query: 244 KKNTWHALITL 254
           K N W     +
Sbjct: 176 KHNPWFDAQIV 186


>gi|260779572|ref|ZP_05888462.1| uracil-DNA glycosylase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260604381|gb|EEX30685.1| uracil-DNA glycosylase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 210

 Score = 59.4 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 60/183 (32%), Gaps = 19/183 (10%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L +L   +R    C   L   +   I A  ++   L+IIG  P    + +  P++  +G+
Sbjct: 2   LEDLLQQIRQCRLCEPNLPLGANPIIQA--SKEAKLLIIGQAPGTRVHKTSIPWNDPSGD 59

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNL-----SNIEMEICRPIIMRQIELISPKI 189
            L + L+  +          I P                 +    +       +L +  +
Sbjct: 60  RLRQWLKLDKTAFYDATKIAIMPMGLCYPGKGKSGDLPPRKECAPQWHSKVLEQLPNIGM 119

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIK 244
            L IG   +N++  +  +   + +  W      +  +P     HP       L + P  +
Sbjct: 120 TLLIGQYAQNYYLQDKPKTLTETVRAWQQWAPHYLPLP-----HPSPRNTLWLKRNPWFE 174

Query: 245 KNT 247
              
Sbjct: 175 AEV 177


>gi|319938544|ref|ZP_08012937.1| uracil-DNA glycosylase superfamily protein [Coprobacillus sp. 29_1]
 gi|319806308|gb|EFW02984.1| uracil-DNA glycosylase superfamily protein [Coprobacillus sp. 29_1]
          Length = 196

 Score = 59.4 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 61/174 (35%), Gaps = 14/174 (8%)

Query: 73  KACSLHELKSLLRSFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
              + ++LK  L S   C  +       +         +M I   PS     +GKPF+  
Sbjct: 2   SIDAFNKLKEELLSCQKCKDIFENDPRPVF-QGNRDSVIMQISQAPSQKVMETGKPFNDA 60

Query: 132 TG-NMLDKML---QSIEIMRTQIHISMISPWHPPGNRN--LSNIEMEICRPIIMRQIELI 185
           +G  +L       +         +I+ +   +P   +               + +++ +I
Sbjct: 61  SGRKLLKDWYQITREEFDNPQYFYITSVGRCYPGKAKTTGDIPPPTHCADYFLKKELNII 120

Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ 239
            P+I + IG+    + F N+  ++      +++       +  L   HP  L +
Sbjct: 121 EPQIYIIIGSYAAKYLFPNETLESLI----FNDHIFQGRPLYVLP--HPSPLNR 168


>gi|76803172|ref|YP_331267.1| uracil-DNA glycosylase-like protein [Natronomonas pharaonis DSM
           2160]
 gi|76559037|emb|CAI50635.1| uracil-DNA glycosylase homolog [Natronomonas pharaonis DSM 2160]
          Length = 218

 Score = 59.4 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 46/136 (33%), Gaps = 15/136 (11%)

Query: 82  SLLRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSD----SDNISGKPFSGK----- 131
           +L      C  L            +    L+I+G  P      +D   G  ++G      
Sbjct: 15  ALADDCQRCPELADCRTEISWGVGSSDATLVIVGEAPGAGNPDADRWRGGNYTGMSYTAQ 74

Query: 132 -TGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI----EMEICRPIIMRQIELIS 186
            +G  + ++ +S+E    +++ +      P      +      E + CRP ++ ++  I 
Sbjct: 75  HSGRRIRELFESLEYAPDELYFTNAVKCFPSDGEGSNREPTSKERDNCRPYLLEELTAIE 134

Query: 187 PKILLFIGNKTKNFFF 202
           P  ++  G        
Sbjct: 135 PACVVPTGRHATETLL 150


>gi|296121641|ref|YP_003629419.1| uracil-DNA glycosylase superfamily [Planctomyces limnophilus DSM
           3776]
 gi|296013981|gb|ADG67220.1| Uracil-DNA glycosylase superfamily [Planctomyces limnophilus DSM
           3776]
          Length = 236

 Score = 59.0 bits (141), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 56/203 (27%), Gaps = 47/203 (23%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTI-------------CATQTEG----------QDLMII 113
           L  L   + S   C         +                                L+II
Sbjct: 5   LEHLNQHIVSCERCPRLRAWCQDVAREKKREFMADNYWGRPVPNLLPIPTQTHVGKLLII 64

Query: 114 GYTPSDSD-NISGKPFSG-KTGNMLDKMLQSIEI-----MRTQIHISMISPWHPPGNRNL 166
           G  P+    N +G+ F+G ++G  L + L           R       +S        + 
Sbjct: 65  GLAPAAHGANRTGRMFTGDRSGEWLYRALHKAGFANQPASRHLDDGLTLSRCAITAVCHC 124

Query: 167 SNI-------EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN-------DAQKTYQN 212
           +         E+  C+  + + IE   P++ L +G        ++        +Q     
Sbjct: 125 APPDNKPGKLEIVNCQEYLTQTIEFFKPQVFLALGQIAWKSLMDHAKAHELLSSQPVKFA 184

Query: 213 LGKWSNLCTPHSIIPTLATVHPQ 235
            G         S    LA+ HP 
Sbjct: 185 HGASITFNDGRSG---LASYHPS 204


>gi|171321412|ref|ZP_02910363.1| Uracil-DNA glycosylase superfamily [Burkholderia ambifaria MEX-5]
 gi|171093315|gb|EDT38512.1| Uracil-DNA glycosylase superfamily [Burkholderia ambifaria MEX-5]
          Length = 199

 Score = 59.0 bits (141), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 58/185 (31%), Gaps = 22/185 (11%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L  L + +R+   C   L       + A       ++I+G  P    + SG P+   +G 
Sbjct: 9   LDVLLTEIRACRACEADLPLGPRPVVRA--HRDARILIVGQAPGARVHASGIPWDDASGK 66

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIELISP 187
            L   L          T+  I  +   +P     G+        ++    ++ ++  I  
Sbjct: 67  RLRDWLGVDADTFYDETRFAIVPMGFCYPGRGASGDNPPRPECAQLWIDRLIAELPSI-- 124

Query: 188 KILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KK 245
           ++ L IG   +  F  +         +  W +          L   HP    +     K 
Sbjct: 125 RLTLLIGQYAQRHFLRDTRKATLTDTVQAWRDY-----GPDVLPLPHPSP--RNQAWFKH 177

Query: 246 NTWHA 250
           + W  
Sbjct: 178 HPWFD 182


>gi|315303980|ref|ZP_07874428.1| uracil-DNA glycosylase superfamily protein [Listeria ivanovii FSL
           F6-596]
 gi|313627649|gb|EFR96334.1| uracil-DNA glycosylase superfamily protein [Listeria ivanovii FSL
           F6-596]
          Length = 191

 Score = 59.0 bits (141), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 55/170 (32%), Gaps = 16/170 (9%)

Query: 76  SLHELKSLLRSFHDCHLCST--SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
           +   L+  +     C           +     +   +M I   PS + + +  PF   +G
Sbjct: 2   NFETLEEEILKCDLCKEKFGFEPHPIVF--GNKKSKIMQISQAPSQNVHKTLTPFDDASG 59

Query: 134 NMLDKMLQ----SIEIMRTQIHISMISPWHPPGNRNLSNI--EMEICRPIIMRQIELISP 187
           + L                  +I+ I+  +P  + N  +           + +++E+I  
Sbjct: 60  HKLRNEWYQISDEEFYNPDNFYITSIAHCYPGKSANGGDRLPPKICATKWLTKEVEVIDN 119

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237
           +I + +G K  +FFF  +         K  N        P     HP  L
Sbjct: 120 EIYIILGAKAASFFFPKENYXXXIFSNKEINHK------PVFVLPHPSPL 163


>gi|221196315|ref|ZP_03569362.1| uracil DNA glycosylase superfamily [Burkholderia multivorans CGD2M]
 gi|221202988|ref|ZP_03576007.1| uracil DNA glycosylase superfamily [Burkholderia multivorans CGD2]
 gi|221209947|ref|ZP_03582928.1| uracil DNA glycosylase superfamily [Burkholderia multivorans CGD1]
 gi|221170635|gb|EEE03101.1| uracil DNA glycosylase superfamily [Burkholderia multivorans CGD1]
 gi|221176922|gb|EEE09350.1| uracil DNA glycosylase superfamily [Burkholderia multivorans CGD2]
 gi|221182869|gb|EEE15269.1| uracil DNA glycosylase superfamily [Burkholderia multivorans CGD2M]
          Length = 199

 Score = 59.0 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 58/183 (31%), Gaps = 18/183 (9%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L  L + +R+   C   L       + A       ++I+G  P    + SG P+   +G 
Sbjct: 9   LDVLLTEIRACRACEADLPLGPRPVVRA--HRDARILIVGQAPGARVHASGIPWDDASGK 66

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189
            L   L          T+  I  +   +P    +  N     C P+ + ++    P  ++
Sbjct: 67  RLRDWLGVDADTFYDDTRFAIVPMGFCYPGRGASGDNPPRAECAPLWLERLLAELPSIRL 126

Query: 190 LLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247
            L IG   +  F  +         +  W +          L   HP    +     K + 
Sbjct: 127 TLLIGQYAQRHFLRDTRKPTLTDTVAAWRDY-----GPDVLPLPHPSP--RNQAWFKHHP 179

Query: 248 WHA 250
           W  
Sbjct: 180 WFD 182


>gi|161520688|ref|YP_001584115.1| uracil-DNA glycosylase superfamily protein [Burkholderia
           multivorans ATCC 17616]
 gi|189353127|ref|YP_001948754.1| uracil-DNA glycosylase superfamily protein [Burkholderia
           multivorans ATCC 17616]
 gi|160344738|gb|ABX17823.1| Uracil-DNA glycosylase superfamily [Burkholderia multivorans ATCC
           17616]
 gi|189337149|dbj|BAG46218.1| uracil-DNA glycosylase superfamily protein [Burkholderia
           multivorans ATCC 17616]
          Length = 199

 Score = 59.0 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 58/183 (31%), Gaps = 18/183 (9%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L  L + +R+   C   L       + A       ++I+G  P    + SG P+   +G 
Sbjct: 9   LDVLLTEIRACRACEADLPLGPRPVVRA--HRDARILIVGQAPGARVHASGIPWDDASGK 66

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189
            L   L          T+  I  +   +P    +  N     C P+ + ++    P  ++
Sbjct: 67  RLRGWLGVDADTFYDDTRFAIVPMGFCYPGRGASGDNPPRAECAPLWLERLLAELPSIRL 126

Query: 190 LLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247
            L IG   +  F  +         +  W +          L   HP    +     K + 
Sbjct: 127 TLLIGQYAQRHFLRDTRKPTLTDTVAAWRDY-----GPDVLPLPHPSP--RNQAWFKHHP 179

Query: 248 WHA 250
           W  
Sbjct: 180 WFD 182


>gi|124516381|gb|EAY57889.1| putative uracil-DNA glycosylase [Leptospirillum rubarum]
          Length = 219

 Score = 58.6 bits (140), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 55/187 (29%), Gaps = 29/187 (15%)

Query: 98  STICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQSIEIMRTQ------ 149
             +         L IIG  P+    N +G+ F+G ++G+ L + L      R        
Sbjct: 32  RPLPGFGDPEALLWIIGLAPAAHGGNRTGRVFTGDRSGDFLFRCLYETGWSRYPTVWGRE 91

Query: 150 -------IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIEL-ISPKILLFIGNKTKN-- 199
                    IS      PP N   S  E   CRP + R+     +   +L +G       
Sbjct: 92  DGQTLFGTWISAAVRCAPPENS-PSPEEFLRCRPFLEREFRQLTNVLAVLVLGALALREW 150

Query: 200 -FFFNNDAQKTYQ-----NLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALIT 253
                       +       G       P+       + HP +  +       T   +  
Sbjct: 151 MMLLGKHDPSLLRKKPSFVHGTHMVFPHPY--PRLFISYHPSQ--RNTQTGLLTKDMMCR 206

Query: 254 LKKALKN 260
           L + ++ 
Sbjct: 207 LLREIRA 213


>gi|312884775|ref|ZP_07744476.1| uracil-DNA glycosylase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309367688|gb|EFP95239.1| uracil-DNA glycosylase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 192

 Score = 58.6 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 66/177 (37%), Gaps = 19/177 (10%)

Query: 77  LHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L +L + +R+   C   L       I A       ++IIG  P    + +  P++  +G 
Sbjct: 2   LEQLLTEIRACRVCQNELPLGCNPIIQA--ASSAKILIIGQAPGLKVHQTSTPWNDPSGQ 59

Query: 135 MLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189
            L + LQ          Q+ I  +   +P   ++      + C P+   QI  + P  K+
Sbjct: 60  RLRQWLQIDSDTFYNPHQVAIMPMGLCYPGKGKSGDLPPRKECAPLWHHQILPLLPQIKL 119

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYP 241
            L IG   +N++  +  +   + + +W         +P     HP       L + P
Sbjct: 120 TLLIGQYAQNYYLYDKPKTLTETVRQWQKWAPHFLPLP-----HPSPRNTLWLRKNP 171


>gi|115358692|ref|YP_775830.1| uracil-DNA glycosylase superfamily protein [Burkholderia ambifaria
           AMMD]
 gi|115283980|gb|ABI89496.1| Uracil-DNA glycosylase superfamily [Burkholderia ambifaria AMMD]
          Length = 199

 Score = 58.6 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 57/185 (30%), Gaps = 22/185 (11%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L  L + +R+   C   L       + A       ++I+G  P    + SG P+   +G 
Sbjct: 9   LDVLLTEIRACRACEADLPLGPRPVVRA--HRDARILIVGQAPGARVHASGIPWDDASGK 66

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIELISP 187
            L   L          T+  I  +   +P     G+         +    ++ ++  I  
Sbjct: 67  RLRDWLGVDADTFYDETRFAIVPMGFCYPGRGASGDNPPRPECAPLWIDRLLAELPSI-- 124

Query: 188 KILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KK 245
           ++ L IG   +  F  +         +  W +          L   HP    +     K 
Sbjct: 125 RLTLLIGQYAQRHFLRDTRKATLTDTVQAWRDY-----GPDVLPLPHPSP--RNQAWFKH 177

Query: 246 NTWHA 250
           + W  
Sbjct: 178 HPWFD 182


>gi|304391851|ref|ZP_07373793.1| uracil-DNA glycosylase [Ahrensia sp. R2A130]
 gi|303296080|gb|EFL90438.1| uracil-DNA glycosylase [Ahrensia sp. R2A130]
          Length = 205

 Score = 58.6 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 54/189 (28%), Gaps = 17/189 (8%)

Query: 74  ACSLHELKSLLRSFHDCHLCSTSLSTICATQTE------GQDLMIIGYTPSDSDNISGKP 127
              L  L++ + +   C +   +   +               L I G  P    + SG P
Sbjct: 2   PEDLSALQTGIDACRIC-IERPAKLPLPHEPRPVAWLSSSARLCIAGQAPGLRVHKSGLP 60

Query: 128 FSGKTGNMLDKMLQSIE---IMRTQIHISMISPWHPPGNRNL---SNIEMEICRPIIMRQ 181
           F   +GN L + +         R ++ I  +    P  +                     
Sbjct: 61  FDDASGNRLREWMGIDCDQFYDREKLAIVPMGFCFPGYDAKGSDLPPRRECRAVWHDDVF 120

Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK-WSNLCTPHSIIPTLATVHPQELIQY 240
             +   ++++ IG   + +   +   +      + W      +     L   HP    + 
Sbjct: 121 AAMPQIELIIVIGQYAQKYHLGSRMARNMTETARDWRTHLHSNEHRVVLPIPHPSW--RN 178

Query: 241 PLI-KKNTW 248
               K+N W
Sbjct: 179 TAWLKRNPW 187


>gi|83716775|ref|YP_438581.1| uracil DNA glycosylase superfamily protein [Burkholderia
           thailandensis E264]
 gi|257141640|ref|ZP_05589902.1| uracil DNA glycosylase superfamily protein [Burkholderia
           thailandensis E264]
 gi|83650600|gb|ABC34664.1| Uracil DNA glycosylase superfamily superfamily [Burkholderia
           thailandensis E264]
          Length = 224

 Score = 58.6 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 73/221 (33%), Gaps = 21/221 (9%)

Query: 53  ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDL 110
           +   R+  SP+         +   L  L   +R+   C  HL       + A       +
Sbjct: 1   MPPKRNAPSPIRNGERPKPTRPSRLGPLLREIRACTVCAPHLPCGPRPVVRAD--PRARI 58

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLS 167
           +I+G  P    + SG P+   +G  L + L    +     +   I  +   +P    +  
Sbjct: 59  LIVGQAPGARVHASGIPWDDASGKRLREWLNVDDATFYDESLFAIVPMGFCYPGRGASGD 118

Query: 168 NIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHS 224
           N     C P+ + ++    P  ++ L IG   +  F     + +  + +  W        
Sbjct: 119 NPPRPECAPLWLDKLLGELPDIRLTLLIGQYAQRRFLGARRKSSLTETVRAWPEY----- 173

Query: 225 IIPTLATVHPQELIQYPLI-KKNTW---HALITLKKALKNL 261
               +   HP    +     K++ W     L  L+  +  L
Sbjct: 174 GPEFIPLAHPSP--RNQGWLKQHPWFEAEVLPALRGKVAEL 212


>gi|114331401|ref|YP_747623.1| uracil-DNA glycosylase superfamily protein [Nitrosomonas eutropha
           C91]
 gi|114308415|gb|ABI59658.1| Uracil-DNA glycosylase superfamily [Nitrosomonas eutropha C91]
          Length = 216

 Score = 58.6 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 27/207 (13%), Positives = 51/207 (24%), Gaps = 39/207 (18%)

Query: 85  RSFHDCHLCSTS------------LSTICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131
           +   DC   +                 +         L+IIG  P     N +G+PF+G 
Sbjct: 9   QDCRDCPRLAQHLDQVKTDHPDYHARPVAPFGDTSAKLLIIGLAPGLHGANRTGRPFTGD 68

Query: 132 T-GNMLDKMLQSIE-------------IMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177
             G +L + L                 +      I+      PP        E+  C   
Sbjct: 69  YAGILLYQTLHKFGLANRSKSVAVGDALRLINCRITNAVKCLPP-ANKPLPAEIRQCNIF 127

Query: 178 IMRQIELI---SPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231
           +  ++        + LL +G                    + G    +     +     +
Sbjct: 128 LASELHDFVSNGGQALLALGTVAHQATLTALRLRKTDYPFSHGAVHPVAGRLRLYD---S 184

Query: 232 VHPQELIQYPLIKKNTWHALITLKKAL 258
            H          K+ T      +   +
Sbjct: 185 YHCS--RYNTQTKRLTEPMFEQIFDRI 209


>gi|84501550|ref|ZP_00999722.1| uracil-DNA glycosylase, putative [Oceanicola batsensis HTCC2597]
 gi|84390171|gb|EAQ02730.1| uracil-DNA glycosylase, putative [Oceanicola batsensis HTCC2597]
          Length = 195

 Score = 58.6 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/198 (13%), Positives = 60/198 (30%), Gaps = 25/198 (12%)

Query: 79  ELKSLLRSFHDCHLCSTSL------STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
           +L S + +   C     +         +         L+I G  P    +  G+PF  ++
Sbjct: 3   DLPSEISACRICADRFAATATRHRPRPVPWF-RPTARLLIAGQAPGLQVHEKGRPFDDRS 61

Query: 133 GNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNL---SNIEMEICRPIIMRQIELIS 186
           G+ L   L   +       ++ +  ++   P  +          +            L  
Sbjct: 62  GDRLRDWLGIDRDTFYDLNRVAVVPMAFCFPGYDARGSDLPPPRICAETWHDRVLAALPQ 121

Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KK 245
            ++ + IG   + +      + T      + +          +   HP    +     K+
Sbjct: 122 LRLRILIGAHAQRWHLGAKGRVTDTVRA-FRDHLPG-----AIPLPHPSW--RNTGWLKR 173

Query: 246 NTW---HALITLKKALKN 260
           N W     L  L++ +K+
Sbjct: 174 NPWFETELLPVLREKVKD 191


>gi|70607485|ref|YP_256355.1| uracil DNA glycosylase [Sulfolobus acidocaldarius DSM 639]
 gi|68568133|gb|AAY81062.1| uracil DNA glycosylase [Sulfolobus acidocaldarius DSM 639]
          Length = 172

 Score = 58.6 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 61/173 (35%), Gaps = 24/173 (13%)

Query: 111 MIIGYTP-SDSDNISGKPFSGKTGN------MLDKML--------QSIEIMRTQIHISMI 155
           MI+G  P  +  N +G+ F+G   +      + D  L        +   +    ++I+ +
Sbjct: 1   MIVGLAPAGNGGNRTGRVFTGDESSNNLTKALYDTGLANQPYSVSRDDGLKLNDVYITAV 60

Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN--- 212
               PP N+  +         +      L   K+ + +G    +   N    K Y+    
Sbjct: 61  VKCVPPENKPTTGEIRNCMSYLEEETRMLTEAKVYVALGKVAWDSLINLFKSKGYELNGD 120

Query: 213 ----LGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
                GK   L    +I+  + + HP    +    ++ T   L  + +  K+L
Sbjct: 121 RKFSHGKIVKLVKDGNIVYLIGSYHPSP--RNVRTRRLTIEMLEEIFETAKSL 171


>gi|170740795|ref|YP_001769450.1| uracil-DNA glycosylase superfamily protein [Methylobacterium sp.
           4-46]
 gi|168195069|gb|ACA17016.1| uracil-DNA glycosylase superfamily [Methylobacterium sp. 4-46]
          Length = 204

 Score = 58.6 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 51/188 (27%), Gaps = 19/188 (10%)

Query: 76  SLHELKSLLRSFHDC--------HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127
              E+ + LR+   C         L       +    +    L I    P      SG+P
Sbjct: 3   EFDEVAAALRACRLCRDAPRHGGPLPVEPRPIV--QGSATARLCIASQAPGHRAFRSGRP 60

Query: 128 FSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNL---SNIEMEICRPIIMRQ 181
           F   +G  L   L   ++      +I I  +    P  +                     
Sbjct: 61  FQDPSGRRLRAWLGLDEATFYDPARIAILPMGACFPGHDAAGGDLPPRRECAETWRARLL 120

Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241
             L +  ++L IG   + +            + +W  L         L   HP    +  
Sbjct: 121 AGLPALDLVLVIGQYAQAWHLGRAPGGLTGTVARWRELFAEPRRPRVLPLPHPSW--RNS 178

Query: 242 LI-KKNTW 248
              K++ W
Sbjct: 179 GWLKRHPW 186


>gi|254286260|ref|ZP_04961219.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|150423675|gb|EDN15617.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
          Length = 190

 Score = 58.6 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 59/166 (35%), Gaps = 14/166 (8%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L  L + +R    C   L   + + +         ++IIG  P    + +  P++  +G 
Sbjct: 2   LESLLTEIRQCTVCEPHLPLGA-NPVI-RAHPSAKILIIGQAPGTKVHNTSIPWNDASGE 59

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189
            L + L   +        I I  +   +P   R+      + C P+   ++    P  ++
Sbjct: 60  RLRQWLGLDRETFYCEENIAIMPMGLCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQL 119

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
            L IG   ++++ ++      + + +W            L   HP 
Sbjct: 120 TLLIGQYAQHYYLSDKPSTLTETVQQWQRWAPS-----VLPLPHPS 160


>gi|313885039|ref|ZP_07818791.1| uracil-DNA glycosylase, family 4 [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312619730|gb|EFR31167.1| uracil-DNA glycosylase, family 4 [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 193

 Score = 58.6 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 53/167 (31%), Gaps = 16/167 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML--QSIEIMRTQIHISMISPWHPPG 162
                L+IIG  P      S  PF  K+G  L + L          ++ I  +  ++P  
Sbjct: 31  NPEAKLLIIGQAPGSHVEKSLIPFDDKSGVTLMEWLGIGPESFYSQEVAIMPMDFYYPGK 90

Query: 163 NR--NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNL 219
            +  +L   +             +   ++ L IG     F+     +K   Q +  +   
Sbjct: 91  GKSGDLPPRKFIAHDYHQSILALMPKIQMTLLIGAYANKFYLGKAFKKNLTQTIASYQEY 150

Query: 220 CTPHSIIPTLATVHPQEL-----IQYPLIKKNTWHALI-TLKKALKN 260
              +        VHP  L      + P  KK+    L   + + L  
Sbjct: 151 LPDY-----FPLVHPSPLNFRWQAKNPWFKKDVLPDLKIKVAQILGE 192


>gi|254441643|ref|ZP_05055136.1| hypothetical protein OA307_1058 [Octadecabacter antarcticus 307]
 gi|198251721|gb|EDY76036.1| hypothetical protein OA307_1058 [Octadecabacter antarcticus 307]
          Length = 194

 Score = 58.6 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 58/197 (29%), Gaps = 23/197 (11%)

Query: 80  LKSLLRSFHDCHLCSTSLSTICA-----TQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L   +     C     +  T  +            L++ G  P      SG+PF+  +G+
Sbjct: 3   LHLQISGCTLCADRFAATHTAHSPRPIVWFEPTTRLLVAGQAPGMKAYKSGRPFTDPSGD 62

Query: 135 MLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEICRPIIMRQIELISPK 188
            L   L    +    ++++ I  ++     +     +L   ++           +L   +
Sbjct: 63  RLRDWLGLDDTTFYDQSRVAIVPMAFCFLGYDAKGSDLPPPKICGQTWHDRVMADLPDVR 122

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247
           + + +G     +        T                  T    HP    +     KKN 
Sbjct: 123 LRVLVGASAHRYHLGVKTGVTETV------SDCRMHAPDTFVLPHPSW--RNTEWLKKNP 174

Query: 248 W---HALITLKKALKNL 261
           W     L  L+  +K +
Sbjct: 175 WFGEEVLPALRARVKEV 191


>gi|206563539|ref|YP_002234302.1| uracil DNA glycosylase superfamily protein [Burkholderia
           cenocepacia J2315]
 gi|198039579|emb|CAR55547.1| uracil DNA glycosylase superfamily protein [Burkholderia
           cenocepacia J2315]
          Length = 199

 Score = 58.6 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 62/199 (31%), Gaps = 25/199 (12%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L  L + +R+   C   L       + A       ++I+G  P    + SG P+   +G 
Sbjct: 9   LDVLLTEIRACRACEADLPLGPRPVVRA--HRDARILIVGQAPGARVHASGIPWDDASGK 66

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIELISP 187
            L   L          T+  I  +   +P     G+         +    ++ ++  I  
Sbjct: 67  RLRDWLGVDAETFYDETRFAIVPMGFCYPGRGASGDNPPRPECAPLWIDRLLAELPSI-- 124

Query: 188 KILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KK 245
           ++ L IG   +  F            +  W +          L   HP    +     K 
Sbjct: 125 RLTLLIGQYAQRHFLRGARKATLTDTVQAWRDY-----GPAVLPLPHPSP--RNQAWFKH 177

Query: 246 NTWHA---LITLKKALKNL 261
           + W     +  L++ +  L
Sbjct: 178 HPWFDAEVVPELRRRIAPL 196


>gi|197105348|ref|YP_002130725.1| uracil-DNA glycosylase [Phenylobacterium zucineum HLK1]
 gi|196478768|gb|ACG78296.1| uracil-DNA glycosylase [Phenylobacterium zucineum HLK1]
          Length = 220

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 50/148 (33%), Gaps = 16/148 (10%)

Query: 101 CATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEIMR----------- 147
            +       L+++G  P  +  N +G+PF+G   G +L + L      R           
Sbjct: 43  PSFGDPDARLLVVGLAPGRTGANRTGRPFTGDFAGWLLYETLLKTGFARGTYEARPDDGL 102

Query: 148 --TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
             T   I+      PPGN+  ++ E      +  R   L   ++++ +G+ ++       
Sbjct: 103 TLTDCMITNAVRCAPPGNKPETSEEANCRPFLTARLASLPRLRVIVTLGDVSRRNVLRAL 162

Query: 206 AQKTYQNLGKWSNLCTPHSIIPTLATVH 233
             K    +               L + H
Sbjct: 163 GLKASAGI-PGHGSEFQAGPYTVLNSYH 189


>gi|146341384|ref|YP_001206432.1| putative uracil-DNA glycosylase [Bradyrhizobium sp. ORS278]
 gi|146194190|emb|CAL78211.1| putative uracil-DNA glycosylase [Bradyrhizobium sp. ORS278]
          Length = 211

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 49/179 (27%), Gaps = 37/179 (20%)

Query: 88  HDCHLC------STSLS---------TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131
            DC LC       T+            + +       L+I+G  P     N +G+PF+G 
Sbjct: 9   RDCPLCPRLVDFRTAQRAREPSWFNAPVPSFGDANARLLIVGLAPGLQGANRTGRPFTGD 68

Query: 132 T-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177
             G +L   L                        IS      PP N+ L     +    +
Sbjct: 69  YAGELLYGTLLQYGFAKGRFDARPDDGLTLIDCRISNAVRCVPPQNKPLPAEINQCRSFL 128

Query: 178 IMRQIELISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
                 +   + ++ +G  + +         A     + G           I    + H
Sbjct: 129 AASIAAMPRLRSIVALGRISHDTLLKLLGLRAAAAPFSHGAVHQA----GGIRLYDSYH 183


>gi|78062188|ref|YP_372096.1| uracil-DNA glycosylase superfamily protein [Burkholderia sp. 383]
 gi|77970073|gb|ABB11452.1| Uracil-DNA glycosylase superfamily [Burkholderia sp. 383]
          Length = 199

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 57/185 (30%), Gaps = 22/185 (11%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L  L + +R+   C   L       + A       ++I+G  P    + SG P+   +G 
Sbjct: 9   LDVLLTEIRACRACEADLPLGPRPVVRA--HRDARILIVGQAPGARVHASGIPWDDASGK 66

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIELISP 187
            L   L          T+  I  +   +P     G+         +    ++ ++  I  
Sbjct: 67  RLRGWLDVDADTFYDETRFAIVPMGFCYPGRGASGDNPPRPECAPLWIDRLLAELPSI-- 124

Query: 188 KILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KK 245
           ++ L IG   +  F  +         +  W +          L   HP    +     K 
Sbjct: 125 RLTLLIGQYAQRHFLRDTRKATLTDTVHAWRDY-----GPDVLPLPHPSP--RNQAWFKH 177

Query: 246 NTWHA 250
           + W  
Sbjct: 178 HPWFD 182


>gi|120613204|ref|YP_972882.1| phage SPO1 DNA polymerase-like protein [Acidovorax citrulli
           AAC00-1]
 gi|120591668|gb|ABM35108.1| phage SPO1 DNA polymerase-related protein [Acidovorax citrulli
           AAC00-1]
          Length = 266

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 50/151 (33%), Gaps = 13/151 (8%)

Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI 169
            +++G +PS      G P SG TG +LD ML+++ + R             PG       
Sbjct: 122 WLVVGESPSP-----GAPLSGDTGKLLDNMLRAMRLHRHPRAHFSAVERAAPGAAEGEED 176

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
                   +   I  + P ++L +G         +      +       L       P +
Sbjct: 177 TAGS----LQAAIATLRPAMVLVLGLPAARAVLGSREPL-GRLRATAHQLP---DGTPAV 228

Query: 230 ATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            T  P  L++ P  K   W  L      ++ 
Sbjct: 229 VTYDPAYLLRAPEAKAAAWADLCRALARVRA 259


>gi|254468100|ref|ZP_05081506.1| uracil-DNA glycosylase superfamily protein [beta proteobacterium
           KB13]
 gi|207086910|gb|EDZ64193.1| uracil-DNA glycosylase superfamily protein [beta proteobacterium
           KB13]
          Length = 209

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 60/213 (28%), Gaps = 47/213 (22%)

Query: 86  SFHDCHL------CSTSLST------ICATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT 132
           +   C          +  +       +          +I+G  P     N +G+PF+G  
Sbjct: 6   NCKKCPRLVNFLDKVSQSNPDYHCRPVAPFGDMNPQFLIVGLAPGMRGANKTGRPFTGDY 65

Query: 133 -GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPII 178
            G +L + L                      + I+      PP N   +  E++ C   +
Sbjct: 66  AGILLYETLSKFGFSSSPESISVKDGLQLFGVRITNAVKCLPPEN-KPTTSEIKQCNNYL 124

Query: 179 MRQIELISPKILLF-IGNKTKNFFFNNDAQKTYQ------NLGKWSNLCTPHSIIPTLAT 231
             +I+ I  K+++  +G         +                  S+    +       +
Sbjct: 125 ATEIKEIKNKLIILALGKIAHEAVLTSQQLTKNHFKFSHGARHIISDQQILYD------S 178

Query: 232 VHPQELIQYPLIKKNT----WHALITLKKALKN 260
            H          K+ T        + +K  ++N
Sbjct: 179 YHCS--RYNTQTKRLTQSMFEEVFLKIKTEMEN 209


>gi|299067384|emb|CBJ38583.1| uracil-dna glycosylase protein [Ralstonia solanacearum CMR15]
          Length = 205

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 60/188 (31%), Gaps = 16/188 (8%)

Query: 78  HELKSLLRSFHDCHLCSTS-----LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
               S L     C LC  +        + A       ++I+G  P    + +G P++ ++
Sbjct: 11  AAFASCLHDIRACRLCEGALPHEPRPVVLAD--RRARVLIVGQAPGRIVHETGIPWNDRS 68

Query: 133 GNMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP-- 187
           G+ L + L+          +I +  +    P    N       +C P   R +    P  
Sbjct: 69  GDRLRQWLRIGYDDFYADRRIAVVPMGFCFPGTGPNGDLPPRPVCAPQWHRPLLTAMPDL 128

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKN 246
           ++ L +G   + ++ +     +  ++ +                 HP    +     K N
Sbjct: 129 RLALLVGGYAQRYYLDMPRGMSLTDVVR-HGPVRDAEGRVLFPLPHPSP--RNLAWFKHN 185

Query: 247 TWHALITL 254
            W     +
Sbjct: 186 PWFDAQIV 193


>gi|296131064|ref|YP_003638314.1| Uracil-DNA glycosylase superfamily [Cellulomonas flavigena DSM
           20109]
 gi|296022879|gb|ADG76115.1| Uracil-DNA glycosylase superfamily [Cellulomonas flavigena DSM
           20109]
          Length = 281

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 56/191 (29%), Gaps = 42/191 (21%)

Query: 84  LRSFHDCHL---CSTSL---------------STICATQTEGQDLMIIGYTPSDS-DNIS 124
           + +   C        +                  +     E   + ++G  P+    N +
Sbjct: 54  VTTCRACPRLVAWRRATAADPPARYRGQTYWARPVPGFGDEHAGIALVGLAPAADGGNRT 113

Query: 125 GKPFSG-KTGNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGNRNLSNIE 170
           G+ F+G ++G+ L   L                 ++ T + ++       P     +  E
Sbjct: 114 GRMFTGDRSGDFLVAALHRAGLASQPTSEDRDDGLVLTGVRMTAPVRC-APPANAPTPAE 172

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFF--------NNDAQKTYQNLGKWSNLCTP 222
              C P + R++ L+ P++++ +G                     +     G    L   
Sbjct: 173 RRTCGPWLARELALVDPRVVVVLGGFGWRALLTTLDEQGWGVPRPRPAFGHGVELTLRRG 232

Query: 223 HSIIPTLATVH 233
            + +  L   H
Sbjct: 233 DASLVLLGCFH 243


>gi|149911168|ref|ZP_01899793.1| Uracil-DNA glycosylase [Moritella sp. PE36]
 gi|149805769|gb|EDM65766.1| Uracil-DNA glycosylase [Moritella sp. PE36]
          Length = 200

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 69/196 (35%), Gaps = 18/196 (9%)

Query: 80  LKSLLRSFHDCHLCST----SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           L +++     C LC          +     +   ++I G  P    + SG PF+  +G+ 
Sbjct: 6   LDTIVSDVRKCTLCEPDLPLGARPVL-QADKKAKILIAGQAPGIRVHKSGIPFTDPSGDR 64

Query: 136 LDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KIL 190
           L + +   +      T+I I  +   +P   ++        C      +I    P  +++
Sbjct: 65  LRQWMGIDKDTFYDATKIAILPMGFCYPGTGKSGDLPPRPECAKTWRAEILAAMPNIELI 124

Query: 191 LFIGNKTKNFFFNN-DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248
           L IG   + +   +   +   + +  W +    +     L   HP    +  +  KKN W
Sbjct: 125 LVIGIYAQKWHMGDVKQKNLTETVKNWRDYWQKNWPER-LPLPHPSP--RNNIWLKKNPW 181

Query: 249 HALITL---KKALKNL 261
             L  +   +  +  L
Sbjct: 182 FELDVIPHLQARVAQL 197


>gi|222823566|ref|YP_002575140.1| hypothetical protein Cla_0555 [Campylobacter lari RM2100]
 gi|222538788|gb|ACM63889.1| conserved hypothetical protein [Campylobacter lari RM2100]
          Length = 203

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 68/184 (36%), Gaps = 10/184 (5%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN- 134
           S  EL   +++ + CH       ++   + +   ++I        +N SGK F+ K    
Sbjct: 29  SFKELNERVKTCNLCHFSKLRKYSLIEKEAKNAKILIYQAFVDKEENESGKFFASKNKQE 88

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
            L    + + +   +I+ S +       N  + +  +++C P    +++ I  KI+L +G
Sbjct: 89  FLRLCKELLNLKEDEIYFSYMFKC--FSNFKIDDQALKLCLPYFYNELDFIKAKIILCLG 146

Query: 195 NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITL 254
            +             ++N  K+   C   +    L +     L + P         +  +
Sbjct: 147 QEAFASL-------GFENFQKYKGQCMRFNNALLLPSYDLNFLSKNPSFYTEFMEDIKKI 199

Query: 255 KKAL 258
           K  L
Sbjct: 200 KGYL 203


>gi|283856519|ref|YP_163383.2| Uracil-DNA glycosylase superfamily protein [Zymomonas mobilis
           subsp. mobilis ZM4]
 gi|283775524|gb|AAV90272.2| Uracil-DNA glycosylase superfamily [Zymomonas mobilis subsp.
           mobilis ZM4]
          Length = 212

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/203 (11%), Positives = 50/203 (24%), Gaps = 29/203 (14%)

Query: 85  RSFHDCHLCSTSLS------------TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131
           R    C   ++                +     +   L I+G  P     N +G+PF+G 
Sbjct: 4   RDCPLCPRLASLRHDLQKEHPDWFNAPVPPFGDDDPWLAIVGLAPGMKGANRTGRPFTGD 63

Query: 132 T-GNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSNIEMEICRPI 177
             G +L + L    +                   +       PP N+  +   +      
Sbjct: 64  FAGILLYETLLKYGLATGHYQADINDGLKLKGTVVLNSVRCLPPQNKPTTQEMVTCRPFF 123

Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237
           +         K++L +G+                   K          I  + + H    
Sbjct: 124 LGAMAHYPHLKVILALGHIAHQTILRAFGITLSSMPFKHGAAYQLSPEIQLVDSYHCS-- 181

Query: 238 IQYPLIKKNTWHALITLKKALKN 260
                 ++ T      +   +  
Sbjct: 182 RYNQNTRRLTEDMFEDVFAKIIE 204


>gi|262200459|ref|YP_003271667.1| uracil-DNA glycosylase superfamily [Gordonia bronchialis DSM 43247]
 gi|262083806|gb|ACY19774.1| Uracil-DNA glycosylase superfamily [Gordonia bronchialis DSM 43247]
          Length = 251

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 58/202 (28%), Gaps = 44/202 (21%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLMIIGYT 116
            S+  L   L     C                           +         ++IIG  
Sbjct: 12  RSIAALDRDLVGCRACPRLVAWREQVGREKRRAFADQEYWARPVPGFGPSDAAVVIIGLA 71

Query: 117 PSDS-DNISGKPFSGK-TGNMLDKMLQS-------------IEIMRTQIHISMISPWHPP 161
           P+    N +G+ F+G  +G++L   L +               ++     ++      PP
Sbjct: 72  PAAHGGNRTGRMFTGDQSGDVLFAALHAAGLANQATSVSADDGLLLYGTRVTAPVHCAPP 131

Query: 162 GNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDA--------QKTYQ 211
            N   +  E + C   +  ++EL++P  + ++ +G        +            +   
Sbjct: 132 QN-KPTPQERDECAHWLHSELELLAPTMRSVVALGAFGWRQTLHTFGTLGWSVPRPRPAF 190

Query: 212 NLGKWSNLCTPHSIIPTLATVH 233
             G  + L      I      H
Sbjct: 191 GHGAHTVLTRGDRSIGVFGCYH 212


>gi|118587969|ref|ZP_01545379.1| hypothetical protein SIAM614_10348 [Stappia aggregata IAM 12614]
 gi|118439591|gb|EAV46222.1| hypothetical protein SIAM614_10348 [Stappia aggregata IAM 12614]
          Length = 219

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 52/180 (28%), Gaps = 22/180 (12%)

Query: 99  TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEIMRTQI------ 150
            + +       L+IIG  P     N +G+PF+G   G++L + +                
Sbjct: 41  PVPSFGDASPRLLIIGLAPGMKGANCTGRPFTGDYAGDLLYQTMIEFGFAEGTYLARPDD 100

Query: 151 -------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF-- 201
                   I+      PP N+            ++       S K +L +G      F  
Sbjct: 101 GLRLKDAMITNAVRCLPPQNKPTGAEIKTCRPYLLSTLDANPSIKAVLALGRIAHETFLT 160

Query: 202 -FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
             +          G    L  P + +    + H           + T     ++ + ++ 
Sbjct: 161 ALDQRRASFAFAHGAQHEL--PGTGLTLFDSYHCS--RYNTNTGRLTEEMFHSVFRQIRA 216


>gi|120554746|ref|YP_959097.1| uracil-DNA glycosylase superfamily protein [Marinobacter aquaeolei
           VT8]
 gi|120324595|gb|ABM18910.1| Uracil-DNA glycosylase superfamily [Marinobacter aquaeolei VT8]
          Length = 198

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 60/182 (32%), Gaps = 15/182 (8%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           S  EL   +R+   C              +E   ++++G  P    + +G PF+  +G+ 
Sbjct: 9   SFDELVRRVRACQICAGDLPHEPRPVIQLSESSRILVVGQAPGRRVHETGLPFNDPSGDR 68

Query: 136 LDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KIL 190
           L + +   +       ++ I  +   +P   ++        C P   + +    P  ++ 
Sbjct: 69  LRQWMGITRDTFYDEQKLAILPMGFCYPGTGKSGDLPPRPECAPAWRQALLDRLPEIRLT 128

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKK 245
           L IG     +      +   +N+ +W            +   HP       L + P  + 
Sbjct: 129 LLIGQYAHAWHIPGARRAVTENVRQWQQFWPD-----VIPMPHPSPRNNLWLRKNPWFEA 183

Query: 246 NT 247
             
Sbjct: 184 EV 185


>gi|319764801|ref|YP_004128738.1| phage spo1 DNA polymerase-related protein [Alicycliphilus
           denitrificans BC]
 gi|317119362|gb|ADV01851.1| phage SPO1 DNA polymerase-related protein [Alicycliphilus
           denitrificans BC]
          Length = 196

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 45/131 (34%), Gaps = 15/131 (11%)

Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI 169
            +++  +P+  +     P +G+ G +LD ML+++ + R                      
Sbjct: 55  WLVVLESPTPGE-----PLAGEVGRLLDNMLRAMGLHRHPRTFVATL----GRPAPGLPA 105

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP-HSIIPT 228
           E       + + +  + P ++L +G         +      + LG+            P 
Sbjct: 106 EGVEPAAGLQQALATLRPAMVLVLGLAAARAVLGSR-----EPLGRLRAATHRLADGTPA 160

Query: 229 LATVHPQELIQ 239
           + +  P  L++
Sbjct: 161 VVSYDPAYLLR 171


>gi|297581732|ref|ZP_06943654.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297534139|gb|EFH72978.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 190

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 71/196 (36%), Gaps = 20/196 (10%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L  L + +R    C   L   + + +         ++IIG  P    + +  P++  +G 
Sbjct: 2   LESLLTEIRQCTVCEPHLPLGA-NPVI-RAHPAAKILIIGQAPGTKVHNTSIPWNDASGE 59

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189
            L + L   +        I I  +   +P   R+      + C P+   ++    P  ++
Sbjct: 60  RLRQWLGLDREAFYCEENIAIMPMGLCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQL 119

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKN--- 246
            L IG   ++++ ++        + +W +          L   HP    +  L  +N   
Sbjct: 120 TLLIGQYAQHYYLSDKPSTLTDTVQQWQSWAPS-----VLPLPHPSP--RNTLWLRNHPW 172

Query: 247 TWHALIT-LKKALKNL 261
               ++  L++ +K +
Sbjct: 173 FEQDILPYLRQRVKQV 188


>gi|209520099|ref|ZP_03268874.1| Uracil-DNA glycosylase superfamily [Burkholderia sp. H160]
 gi|209499472|gb|EDZ99552.1| Uracil-DNA glycosylase superfamily [Burkholderia sp. H160]
          Length = 208

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 67/198 (33%), Gaps = 19/198 (9%)

Query: 75  CSLHELKSLLRSFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
            S   L   +RS   C      +   + A  + G  ++I+G  P    + SG P+S  +G
Sbjct: 13  ASFDALLHDIRSCTLCAPNLPHAPRPVLAA-SVGARILIVGQAPGARVHASGVPWSDASG 71

Query: 134 NMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQI--ELISPK 188
             L   L          ++  I  +    P    +        C     R++   L S K
Sbjct: 72  ARLRTWLGVDDWTFYDDSKFAIVPMGFCFPGRGASGDLPPRPECASRWHRELLAHLRSVK 131

Query: 189 ILLFIGNKTKNFFFNN-DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKN 246
           + L IG   + F   +     +   L +W+           L   HP    +     K+N
Sbjct: 132 LTLLIGQYAQRFGLGDAFGPTSTDTLVRWAEFEPH-----VLPLPHPSP--RNIAWFKRN 184

Query: 247 TW---HALITLKKALKNL 261
            W     L TL++ +  +
Sbjct: 185 PWFEGEVLPTLRERVAAV 202


>gi|224825202|ref|ZP_03698308.1| Uracil-DNA glycosylase superfamily [Lutiella nitroferrum 2002]
 gi|224602873|gb|EEG09050.1| Uracil-DNA glycosylase superfamily [Lutiella nitroferrum 2002]
          Length = 196

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 60/167 (35%), Gaps = 15/167 (8%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L  L + +R+   C   L       + A       ++++G  P    + +G PF+  +G+
Sbjct: 6   LDTLLAEIRACRHCEVQLPLGPRPVVQA--AATARILLVGQAPGVRVHQTGLPFNDPSGD 63

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189
            L + L   +       ++ I  +   +P  + +        C  +  +++    P  ++
Sbjct: 64  RLRRWLDLDRDTFYDPARLAIVPMGFCYPGKHGSGDAPPRPECAALWRQRLLAQLPDIRL 123

Query: 190 LLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQ 235
            L IG   + +      +KT    +  W        ++P     HP 
Sbjct: 124 TLLIGQYAQAWHLGKRRKKTLTDTVKAWREYQPAFFVLP-----HPS 165


>gi|153830395|ref|ZP_01983062.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|148874129|gb|EDL72264.1| conserved hypothetical protein [Vibrio cholerae 623-39]
          Length = 190

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 59/166 (35%), Gaps = 14/166 (8%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L  L + +R    C   L   + + +         ++IIG  P    + +  P++  +G 
Sbjct: 2   LESLLTEIRQCTVCEPYLPLGA-NPVI-RAHPAAKILIIGQAPGTKVHNTSIPWNDASGE 59

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189
            L + L   +        I I  +   +P   R+      + C P+   ++    P  ++
Sbjct: 60  RLRQWLGLDREAFYCEENIAIMPMGLCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQL 119

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
            L IG   ++++ ++      + + +W            L   HP 
Sbjct: 120 TLLIGQYAQHYYLSDKPNTLTETVQQWQRWAPS-----VLPLPHPS 160


>gi|54024325|ref|YP_118567.1| hypothetical protein nfa23560 [Nocardia farcinica IFM 10152]
 gi|54015833|dbj|BAD57203.1| hypothetical protein [Nocardia farcinica IFM 10152]
          Length = 268

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 60/185 (32%), Gaps = 36/185 (19%)

Query: 53  ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL--------------- 97
           + +           A     +  S+ +L + + +   C                      
Sbjct: 1   MPSGTRPPPVPRAGAAPARARYRSIADLDADIAACRACPRLVRWRELVAETKRAAFRDET 60

Query: 98  ---STICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQSIEIMRTQI-- 150
                +     +   L+++G  P+    N +G+ F+G ++G++L   L ++ +       
Sbjct: 61  YWGRPVPGFGPDDARLLLVGLAPAAHGGNRTGRMFTGDRSGDVLFAALHAVGLANQPTAV 120

Query: 151 -----------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKT 197
                       ++      PP N   +  E + CR  +  ++ L++P  + ++ +G   
Sbjct: 121 HPGDGLRLLGARVTAPVHCAPPDN-KPTVTERDRCRGWLDVELGLLAPTVRAIVVLGGFG 179

Query: 198 KNFFF 202
                
Sbjct: 180 WQALL 184


>gi|127513287|ref|YP_001094484.1| uracil-DNA glycosylase superfamily protein [Shewanella loihica
           PV-4]
 gi|126638582|gb|ABO24225.1| Uracil-DNA glycosylase superfamily [Shewanella loihica PV-4]
          Length = 196

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 51/177 (28%), Gaps = 15/177 (8%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            +L +L   +     C    +              ++I+G  P      SG PF   +G+
Sbjct: 2   ETLDQLLERIACCQICQPHLSHKVRPVLQAASSAKVLIVGQAPGTKAAASGLPFDDPSGD 61

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR--QIELISPKI 189
            L   L   +      +   I  +   +P   R+        C P         L + ++
Sbjct: 62  RLRDWLGVSREQFYDSSLFAIVPMGFCYPGKGRSGDLPPRGECAPAWREPLLAHLKNIQL 121

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYP 241
            L IG   + + F        + +  W            +   HP       L + P
Sbjct: 122 TLVIGQYAQAYHFGKQCGGVTECVQGWQQ-----HGSHIMPLPHPSPRNNLWLRRNP 173


>gi|262277970|ref|ZP_06055763.1| uracil-DNA glycosylase superfamily protein [alpha proteobacterium
           HIMB114]
 gi|262225073|gb|EEY75532.1| uracil-DNA glycosylase superfamily protein [alpha proteobacterium
           HIMB114]
          Length = 223

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/200 (11%), Positives = 53/200 (26%), Gaps = 39/200 (19%)

Query: 82  SLLRSFHDCHL---------CSTSL---------STICATQTEGQDLMIIGYTPSDSD-N 122
             +     C                           +      G  L++IG  P+     
Sbjct: 10  RKVHKCKKCPRLVQFRNKISSEKRKSYQDQTYWNKPVTGFGDLGAKLILIGLAPAAHGAT 69

Query: 123 ISGKPFSGKTG-NMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSN 168
            +G+ F+G    + L + L    +                   I++     PP +     
Sbjct: 70  RTGRVFTGDKSADFLFQCLFKSGLSNQPNSDHVKDGLKLKNTFITLALRCVPPQD-KPKP 128

Query: 169 IEMEICRPIIMRQIELISPKI-LLFIGNKTKNFFFNNDAQKT--YQNLGKWSNLCTPHSI 225
           IE++ C      ++ ++  K  ++ +G    +       +                  + 
Sbjct: 129 IELKNCSSFFKEELNMLKNKKVIIALGKIAFDACIRFYKENYNISGPFKFAHGAKYKIND 188

Query: 226 IPTLATVHPQELIQYPLIKK 245
           +  ++  HP    +    K+
Sbjct: 189 VYLVSCYHPSP--RNVNTKR 206


>gi|307637340|gb|ADN79790.1| hypothetical protein hp908_0663 [Helicobacter pylori 908]
 gi|325995932|gb|ADZ51337.1| hypothetical protein hp2018_0641 [Helicobacter pylori 2018]
 gi|325997526|gb|ADZ49734.1| hypothetical protein hp2017_0640 [Helicobacter pylori 2017]
          Length = 209

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 61/184 (33%), Gaps = 13/184 (7%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            ++   + + + C     S   +         L  I  TP    +      +     ML+
Sbjct: 37  KQVHEGIENCNLCKRHQHSK-PVIGLFNPTSKLAFITLTP--MLDSQLHFLNNLKALMLE 93

Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++Q          +I  +       N      E+  C P +  Q++  + K+++  G  
Sbjct: 94  SIIQKVFNYPLKDCNILSLLKC--DSNSLNLEEEINACLPHLTWQLDNSASKVIVVFGEI 151

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                 N       ++ G+  +L T H     L+T   +++++ P +KK          +
Sbjct: 152 LPKRLLNLSK---EESFGRIVSLKTKH----FLSTYALEDMLKNPTLKKEALAHFKIALQ 204

Query: 257 ALKN 260
            L  
Sbjct: 205 FLNQ 208


>gi|284989504|ref|YP_003408058.1| Uracil-DNA glycosylase superfamily [Geodermatophilus obscurus DSM
           43160]
 gi|284062749|gb|ADB73687.1| Uracil-DNA glycosylase superfamily [Geodermatophilus obscurus DSM
           43160]
          Length = 261

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/217 (11%), Positives = 59/217 (27%), Gaps = 43/217 (19%)

Query: 59  IHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL------------------STI 100
             +         A+    L  L + +     C                           +
Sbjct: 9   PVTRSPAGVVRSARSTRDLAVLDARISGCRACPRLVAWREEVACVKRASFRHEEYWGRPV 68

Query: 101 CATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQS-------------IEI 145
                    + ++G  P+    N +G+ F+G ++G+ +   L                 +
Sbjct: 69  PGLGPADARIAVVGLAPAAHGGNRTGRVFTGDRSGDWIFAALWRAGLANQPTSTHIGDGL 128

Query: 146 MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE-LISPKILLFIGNKTKNFF--- 201
             T + ++      PP     +  E + C P + R++  L   ++ + +G          
Sbjct: 129 QLTDVRVAAAVRCAPP-ANAPTPEERDTCSPWLARELALLPRLRVAVVLGGFGWTALWPV 187

Query: 202 FNNDAQKTYQNL-----GKWSNLCTPHSIIPTLATVH 233
                    +       G   +L  P   +  L + H
Sbjct: 188 LAGAGYPLPRPRPAFGHGVEVSLEGPRGPLTLLGSYH 224


>gi|121611374|ref|YP_999181.1| hypothetical protein Veis_4462 [Verminephrobacter eiseniae EF01-2]
 gi|121556014|gb|ABM60163.1| hypothetical protein Veis_4462 [Verminephrobacter eiseniae EF01-2]
          Length = 167

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 26/75 (34%), Gaps = 5/75 (6%)

Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK 245
            P ++L +G+               + LG+        +  P + +  P  L++ P  K 
Sbjct: 93  QPALVLVLGHVAARAALG-----CTEPLGRLRAGPHQLAACPAVVSYDPAFLLRSPDTKA 147

Query: 246 NTWHALITLKKALKN 260
             W  L      ++N
Sbjct: 148 AAWADLCRALAMVRN 162


>gi|89094466|ref|ZP_01167405.1| hypothetical protein MED92_08901 [Oceanospirillum sp. MED92]
 gi|89081202|gb|EAR60435.1| hypothetical protein MED92_08901 [Oceanospirillum sp. MED92]
          Length = 194

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 60/193 (31%), Gaps = 15/193 (7%)

Query: 80  LKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
           L   +R+   C   L   +   + A       L+IIG  P    + SG P++  +GN L 
Sbjct: 4   LLEQIRACKLCEPDLALGANPVVQA--APSAKLLIIGQAPGIKVHQSGIPWNDPSGNRLR 61

Query: 138 KML---QSIEIMRTQIHISMISPWHP-PGNRNLSNIEMEICRPIIMRQIEL-ISPKILLF 192
           + L            I I  +   +P  G         E       + ++   + +++L 
Sbjct: 62  EWLQIDHERFYDPQHIAIMPMGFCYPGKGKSGDLPPRPECAEKWHQKLLDELPNIELILL 121

Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW--- 248
           IG   + ++                         P     HP    +     +KN W   
Sbjct: 122 IGQYAQKYYLKGSEWGERHQNLTDRVKHANSCPSPYFVLPHPSP--RNRHWMQKNAWFES 179

Query: 249 HALITLKKALKNL 261
             L  L+  L  L
Sbjct: 180 ETLPLLRAQLNKL 192


>gi|332991658|gb|AEF01713.1| uracil-DNA glycosylase [Alteromonas sp. SN2]
          Length = 192

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 53/165 (32%), Gaps = 16/165 (9%)

Query: 77  LHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
             +L    +    C  HL    ++ I +  +    +++IG  P    + + K FS K+G 
Sbjct: 8   FEDLVKEAKQCSLCVEHL-PYGVNPIFSIGS-KAKVVLIGQAPGLIAHQNTKAFSDKSGE 65

Query: 135 MLDKMLQSI---EIMRTQIHISMISPWHP-PGNRNLSNIEMEICRPIIMRQIELISPKIL 190
            L + L           ++ I  +    P   N   +    E       + +  I P+++
Sbjct: 66  RLRQWLHIDTTTFYDENKLAIMPMGFCFPGYKNGADAPPRKECAPTWHEKMLHAIQPELV 125

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
           L +G   + ++       T                   L   HP 
Sbjct: 126 LLVGRYAQQYYLPKYRTLTDAIK------NNCDEKFAVLP--HPS 162


>gi|295425191|ref|ZP_06817894.1| possible uracil-DNA glycosylase [Lactobacillus amylolyticus DSM
           11664]
 gi|295064967|gb|EFG55872.1| possible uracil-DNA glycosylase [Lactobacillus amylolyticus DSM
           11664]
          Length = 153

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 44/123 (35%), Gaps = 18/123 (14%)

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG-------- 162
           MI+G  P   +  S  PF G +   L K + SI + R  ++I+      P          
Sbjct: 1   MIVGEAPGHEELASQIPFHGDSRKELMKSIASIGLKREDVYITSAVRSRPYAVKKVFSKR 60

Query: 163 ---------NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL 213
                    NR  +  E+    P    +I+ I P +++ +GN            +  +  
Sbjct: 61  ENKEVVKYPNRKPTKKEVLAHAPFSDYEIKEIEPTLIVAVGNTALERLLGP-GHRISEEH 119

Query: 214 GKW 216
           GK 
Sbjct: 120 GKI 122


>gi|154253304|ref|YP_001414128.1| uracil-DNA glycosylase superfamily protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154157254|gb|ABS64471.1| Uracil-DNA glycosylase superfamily [Parvibaculum lavamentivorans
           DS-1]
          Length = 223

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 48/182 (26%), Gaps = 33/182 (18%)

Query: 82  SLLRSFHDCHLCSTSLS------------TICATQTEGQDLMIIGYTPSDSD-NISGKPF 128
                   C                     + +  T    L+I+G  P     N +G+PF
Sbjct: 13  EAPLDCPLCPRLVAYRQDNDRAHPDWFNAPVPSFGTGNARLLIVGLAPGVQGANRTGRPF 72

Query: 129 SGKT-GNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSNIEMEIC 174
           +G   G++L   L      R                 I+      PP N+          
Sbjct: 73  TGDYAGDLLYATLLEFGFARGTYDARPDDGLELVGAMITNAVRCVPPQNKPTPAEAKTCL 132

Query: 175 RPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN---LGKWSNLCTPHSIIPTLAT 231
           R +  R   L   + +L +G    +   +    K        G   +L      +    +
Sbjct: 133 RFLSARIEALPDLQAVLALGRIAHDAVLSARELKRSSAPFGHGAQHDL---GQGLRLFDS 189

Query: 232 VH 233
            H
Sbjct: 190 YH 191


>gi|313887865|ref|ZP_07821544.1| uracil-DNA glycosylase family protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312846031|gb|EFR33413.1| uracil-DNA glycosylase family protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 190

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 57/167 (34%), Gaps = 19/167 (11%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
                ++IIG  P +    +G  F+ K+G  L K L   E +        I P       
Sbjct: 31  NPKSKILIIGQAPGERVEETGILFNDKSGENLVKWLGISEDVLHSED-FSIIPMDFYYPG 89

Query: 165 NLSNIEMEICRPIIMRQIE------LISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWS 217
              + + +  R  I ++        L   K+ + IG   + F+  +  +K   + +  + 
Sbjct: 90  KGKSGD-KAPRTFIAKEYHPLLLNELKDIKLTILIGAYAQKFYLKDKFKKNLTETVKSYK 148

Query: 218 NLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALK 259
                +        VHP       + + P  ++     L  + K L+
Sbjct: 149 EFLPEY-----FPIVHPSPLNNRWIAKNPFFREEVLPELKKIVKKLR 190


>gi|269796277|ref|YP_003315732.1| uracil-DNA glycosylase [Sanguibacter keddieii DSM 10542]
 gi|269098462|gb|ACZ22898.1| uracil-DNA glycosylase [Sanguibacter keddieii DSM 10542]
          Length = 266

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/253 (13%), Positives = 71/253 (28%), Gaps = 51/253 (20%)

Query: 57  RHIHSPLVQQA-DSIAQKACSLHELKSLLRSFHDCH-LCSTSLST--------------- 99
           R         A   +A  A SL E+  L+     C  L +                    
Sbjct: 12  RLPRPTWPGDAGPDLAAGARSLLEVDRLVEGCTACPRLVAFREQVSDERRAAFRDQTYWG 71

Query: 100 --ICATQTEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKMLQSIEIMRTQI----- 150
             + +   E   ++++G  P+    N +G+ F+G ++G +L   +               
Sbjct: 72  RGVPSLGDEQAGVLVVGLAPAAHGSNRTGRMFTGDRSGEVLYAAMHRTGFASQPTAVSRD 131

Query: 151 --------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS--PKILLFIGNKTKNF 200
                    +       PP N   +  E   C P + R++EL++   ++ + +G      
Sbjct: 132 DGLVLTGARVVAPVHCVPPDN-KPTPDERRRCSPYLGRELELLAGTVRVAVVLGGFGWVA 190

Query: 201 FFNN--------DAQKTYQNLG-KWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT---W 248
                          +     G +          +  L   H           + T    
Sbjct: 191 LLATLRDQGWSVPRPRPRFGHGVQVRLEHPDGRDLTLLGCFHVSP--HNTSTGRLTPQMV 248

Query: 249 HALITLKKALKNL 261
             ++   + L  +
Sbjct: 249 DDVLLEARRLAEV 261


>gi|15640295|ref|NP_229922.1| hypothetical protein VC0266 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121586366|ref|ZP_01676155.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121727046|ref|ZP_01680237.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147673328|ref|YP_001218522.1| hypothetical protein VC0395_A2644 [Vibrio cholerae O395]
 gi|153818473|ref|ZP_01971140.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153821807|ref|ZP_01974474.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|227080481|ref|YP_002809032.1| hypothetical protein VCM66_0251 [Vibrio cholerae M66-2]
 gi|229506937|ref|ZP_04396445.1| uracil-DNA glycosylase [Vibrio cholerae BX 330286]
 gi|229509308|ref|ZP_04398791.1| uracil-DNA glycosylase [Vibrio cholerae B33]
 gi|229516254|ref|ZP_04405702.1| uracil-DNA glycosylase [Vibrio cholerae RC9]
 gi|229606448|ref|YP_002877096.1| uracil-DNA glycosylase [Vibrio cholerae MJ-1236]
 gi|255744072|ref|ZP_05418026.1| uracil-DNA glycosylase [Vibrio cholera CIRS 101]
 gi|262161961|ref|ZP_06030978.1| uracil-DNA glycosylase [Vibrio cholerae INDRE 91/1]
 gi|262168027|ref|ZP_06035726.1| uracil-DNA glycosylase [Vibrio cholerae RC27]
 gi|298500902|ref|ZP_07010704.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|9654676|gb|AAF93441.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121549486|gb|EAX59514.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121630557|gb|EAX62947.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|126510949|gb|EAZ73543.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126520703|gb|EAZ77926.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|146315211|gb|ABQ19750.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|227008369|gb|ACP04581.1| conserved hypothetical protein [Vibrio cholerae M66-2]
 gi|227012109|gb|ACP08319.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|229346680|gb|EEO11650.1| uracil-DNA glycosylase [Vibrio cholerae RC9]
 gi|229353623|gb|EEO18560.1| uracil-DNA glycosylase [Vibrio cholerae B33]
 gi|229356042|gb|EEO20961.1| uracil-DNA glycosylase [Vibrio cholerae BX 330286]
 gi|229369103|gb|ACQ59526.1| uracil-DNA glycosylase [Vibrio cholerae MJ-1236]
 gi|255738337|gb|EET93728.1| uracil-DNA glycosylase [Vibrio cholera CIRS 101]
 gi|262023560|gb|EEY42262.1| uracil-DNA glycosylase [Vibrio cholerae RC27]
 gi|262028339|gb|EEY46995.1| uracil-DNA glycosylase [Vibrio cholerae INDRE 91/1]
 gi|297540406|gb|EFH76465.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
          Length = 190

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 59/166 (35%), Gaps = 14/166 (8%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L  L + +R    C   L   + + +         ++IIG  P    + +  P++  +G 
Sbjct: 2   LESLLTEIRQCTVCEPHLPLGA-NPVI-RAHPAAKILIIGQAPGTKVHQTSIPWNDASGE 59

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189
            L + L   +        I I  +   +P   R+      + C P+   ++    P  ++
Sbjct: 60  RLRQWLGLDREAFYCEENIAIMPMGLCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQL 119

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
            L IG   ++++ ++      + + +W            L   HP 
Sbjct: 120 TLLIGQYAQHYYLSDKPSTLTETVQQWQRWAPS-----VLPLPHPS 160


>gi|159036498|ref|YP_001535751.1| uracil-DNA glycosylase superfamily protein [Salinispora arenicola
           CNS-205]
 gi|157915333|gb|ABV96760.1| Uracil-DNA glycosylase superfamily [Salinispora arenicola CNS-205]
          Length = 230

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 58/200 (29%), Gaps = 42/200 (21%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLMIIGYT 116
            SL  L + +     C                           +         + I+G  
Sbjct: 2   PSLAVLDAAIAECFACPRLVGWREEVARTRRAAFREQEYWGRPVPGFGDRTARIAILGLA 61

Query: 117 PSDS-DNISGKPFSG-KTGNMLDKMLQ-------------SIEIMRTQIHISMISPWHPP 161
           P+    N +G+ F+G ++G++L   L              +  +      +       PP
Sbjct: 62  PAAHGGNRTGRVFTGDRSGDVLFAALHRAGLANQPTSVAAADGLTLRGTRVLAAVRCAPP 121

Query: 162 GNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNF----FFNNDAQKTYQNLGK 215
           GN   +  E + C P + R++ L+ P  ++++ +G                         
Sbjct: 122 GN-KPTPGERDTCAPWLHREVALLRPSLRVVVTLGAFAWTAWWPTLRQVYGVTPPSPRPA 180

Query: 216 W-SNLCTPHSIIP-TLATVH 233
           +        + +P  L   H
Sbjct: 181 FTHGAHWSGTAVPDLLGCYH 200


>gi|307822709|ref|ZP_07652940.1| Uracil-DNA glycosylase superfamily [Methylobacter tundripaludum
           SV96]
 gi|307736313|gb|EFO07159.1| Uracil-DNA glycosylase superfamily [Methylobacter tundripaludum
           SV96]
          Length = 213

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 46/194 (23%), Gaps = 29/194 (14%)

Query: 85  RSFHDCH-----LCSTSLS-------TICATQTEGQDLMIIGYTPSDSDNI-SGKPFSGK 131
           +    C      LC             +         L+I+G  P       +G+PF+G 
Sbjct: 9   QDCRQCKRLDDFLCEVKQKHPDYHARPVAPFGDSAAQLLIVGLAPGMHGANATGRPFTGD 68

Query: 132 T-GNMLDKMLQSIEIMRT-------------QIHISMISPWHPPGNRNLSNIEMEICRPI 177
             G +L + L                        I+      PP N+  +    +    +
Sbjct: 69  YAGLLLYEALYEFGYSNQIKSESLTDGLALKNCRITNAVKCLPPQNKPTNAEINQCNAYL 128

Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237
                 L    ++L +G             K        +           + + H    
Sbjct: 129 AAELKTLPEQAVILALGLVAHQAVLKAYGLKQNSAKFAHNVQHALPDGCTLIDSYHTS-- 186

Query: 238 IQYPLIKKNTWHAL 251
                 K+ T    
Sbjct: 187 RYNVQTKRLTKEMF 200


>gi|301165886|emb|CBW25459.1| hypothetical protein BMS_0548 [Bacteriovorax marinus SJ]
          Length = 286

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 3/81 (3%)

Query: 181 QIELISPKILLFIGNKTKNFFFNND---AQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237
           +I L  PK ++ +G    NF +      ++   Q L +   +             HP  L
Sbjct: 203 EIALFKPKAVISLGAVATNFLYGKKEKLSKIHGQELERIIEIGDESINFTLFPIFHPDLL 262

Query: 238 IQYPLIKKNTWHALITLKKAL 258
              P +K+  W  L  + K L
Sbjct: 263 EINPSMKRTAWMDLQKVMKFL 283


>gi|218661345|ref|ZP_03517275.1| putative uracil DNA glycosylase protein [Rhizobium etli IE4771]
          Length = 94

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 12/89 (13%), Positives = 31/89 (34%), Gaps = 10/89 (11%)

Query: 176 PIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
             +  ++ L+ PK+++ +G        +   +      GK               TVHP 
Sbjct: 1   WWLDLELTLVKPKLIVAMGATALAALTDVKGRLQ-DVRGK---AVAIAGGRTLFVTVHPS 56

Query: 236 ELIQYPLIK------KNTWHALITLKKAL 258
            L++ P  +            ++ +++ +
Sbjct: 57  YLLRIPDERLKAEEMARFREDMLEIQRLM 85


>gi|260462332|ref|ZP_05810540.1| Uracil-DNA glycosylase superfamily [Mesorhizobium opportunistum
           WSM2075]
 gi|259031826|gb|EEW33094.1| Uracil-DNA glycosylase superfamily [Mesorhizobium opportunistum
           WSM2075]
          Length = 218

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 44/151 (29%), Gaps = 22/151 (14%)

Query: 101 CATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEIMRTQI-------- 150
                    L+I+G  P     N +G+PF+G   G++L   L +    R +         
Sbjct: 43  PPEGDAAVRLLIVGLAPGLRGANRTGRPFTGDYAGDLLYSTLIAHGFARGEFKARPDDGL 102

Query: 151 -----HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FF 202
                 I+      PP N+ +          ++       + + +L +G+          
Sbjct: 103 ELVGTAITNAVRCVPPENKPVGAEIATCRTFLVPTIARFPNLRAVLALGSIAHQSTVRAL 162

Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
                      G       P   I   ++ H
Sbjct: 163 GGRVAAYPFKHG----GQLPAGGITLFSSYH 189


>gi|89068529|ref|ZP_01155926.1| uracil-DNA glycosylase, putative [Oceanicola granulosus HTCC2516]
 gi|89045948|gb|EAR52008.1| uracil-DNA glycosylase, putative [Oceanicola granulosus HTCC2516]
          Length = 194

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 56/201 (27%), Gaps = 31/201 (15%)

Query: 80  LKSLLRSFHDCHLCSTSL------STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
           L   +R+   C     +         +      G  ++I G  P    + + +PF+  +G
Sbjct: 4   LADDIRACRLCADRFRATATRHTPRPVPWF-DAGARILIAGQAPGARVHEAQRPFADASG 62

Query: 134 NMLDKML---QSIEIMRTQIHISMISPWHPPGNRN-----LSNIEMEICRPIIMRQIELI 185
             L   L   +     R +I +  ++   P  +          I        +M  +  +
Sbjct: 63  VRLRDWLGLGEDEFYDRNRIAVVPMAFCFPGYDAKGSDLPPPPICAATWHDRVMAALPDL 122

Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQY 240
             +  + +G     +        T +                T    HP       L + 
Sbjct: 123 GLR--ILVGGHAHRWHLGGRLSLTERV------ADWRAHAPHTFPLPHPSWRNTGWLKRN 174

Query: 241 PLIKKNTWHALITLKKALKNL 261
           P         L  LK  ++ +
Sbjct: 175 P---WFAEELLPVLKARVREV 192


>gi|229524783|ref|ZP_04414188.1| uracil-DNA glycosylase [Vibrio cholerae bv. albensis VL426]
 gi|229338364|gb|EEO03381.1| uracil-DNA glycosylase [Vibrio cholerae bv. albensis VL426]
          Length = 190

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 59/166 (35%), Gaps = 14/166 (8%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L  L + +R    C   L   + + +         ++IIG  P    + +  P++  +G 
Sbjct: 2   LESLLTEIRQCTVCEPHLPLGA-NPVI-RAHPAAKILIIGQAPGTKVHQTSIPWNDASGE 59

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189
            L + L   +        I I  +   +P   R+      + C P+   ++    P  ++
Sbjct: 60  RLRQWLGLDREAFYCEENIAIMPMGLCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQL 119

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
            L IG   ++++ ++      + + +W            L   HP 
Sbjct: 120 TLLIGQYAQHYYLSDKPSTLTETVQQWQRWAPS-----VLPLPHPS 160


>gi|153801535|ref|ZP_01956121.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|229512733|ref|ZP_04402201.1| uracil-DNA glycosylase [Vibrio cholerae TMA 21]
 gi|124122940|gb|EAY41683.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|229350243|gb|EEO15195.1| uracil-DNA glycosylase [Vibrio cholerae TMA 21]
          Length = 190

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 59/166 (35%), Gaps = 14/166 (8%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L  L + +R    C   L   + + +         ++IIG  P    + +  P++  +G 
Sbjct: 2   LESLLTEIRQCTVCEPHLPLGA-NPVI-RAHPAAKILIIGQAPGTKVHNTSIPWNDASGE 59

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189
            L + L   +        I I  +   +P   R+      + C P+   ++    P  ++
Sbjct: 60  RLRQWLGLDREAFYCEGNIAIMPMGLCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQL 119

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
            L IG   ++++ ++      + + +W            L   HP 
Sbjct: 120 TLLIGQYAQHYYLSDKPSTLTETVQQWQRWAPS-----VLPLPHPS 160


>gi|229527236|ref|ZP_04416629.1| uracil-DNA glycosylase [Vibrio cholerae 12129(1)]
 gi|229335244|gb|EEO00728.1| uracil-DNA glycosylase [Vibrio cholerae 12129(1)]
          Length = 190

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 59/166 (35%), Gaps = 14/166 (8%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L  L + +R    C   L   + + +         ++IIG  P    + +  P++  +G 
Sbjct: 2   LESLLTEIRQCTVCEPHLPLGA-NPVI-RAHPAAKILIIGQAPGTKVHQTSIPWNDASGE 59

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189
            L + L   +        I I  +   +P   R+      + C P+   ++    P  ++
Sbjct: 60  RLRQWLGLDREAFYCEENIAIMPMGLCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQL 119

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
            L IG   ++++ ++      + + +W            L   HP 
Sbjct: 120 TLLIGQYAQHYYLSDKPSTLTETVQQWQRWAPS-----VLPLPHPS 160


>gi|262192518|ref|ZP_06050668.1| uracil-DNA glycosylase [Vibrio cholerae CT 5369-93]
 gi|262031563|gb|EEY50151.1| uracil-DNA glycosylase [Vibrio cholerae CT 5369-93]
          Length = 190

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 59/166 (35%), Gaps = 14/166 (8%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L  L + +R    C   L   + + +         ++IIG  P    + +  P++  +G 
Sbjct: 2   LESLLTEIRQCTVCEPHLPLGA-NPVI-RAHPAAKILIIGQAPGTKVHQTSIPWNDASGE 59

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189
            L + L   +        I I  +   +P   R+      + C P+   ++    P  ++
Sbjct: 60  RLRQWLGLDREAFYCEENIAIMPMGLCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQL 119

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
            L IG   ++++ ++      + + +W            L   HP 
Sbjct: 120 TLLIGQYAQHYYLSDKPSTLTETVQQWQRWAPS-----VLPLPHPS 160


>gi|158422875|ref|YP_001524167.1| uracil-DNA glycosylase superfamily protein [Azorhizobium
           caulinodans ORS 571]
 gi|158329764|dbj|BAF87249.1| uracil-DNA glycosylase superfamily protein [Azorhizobium
           caulinodans ORS 571]
          Length = 211

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/179 (14%), Positives = 49/179 (27%), Gaps = 37/179 (20%)

Query: 88  HDCHLC-------STSLS--------TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131
            DC LC       ST  +         +     +   L+I+G  P     N +G+PF+G 
Sbjct: 7   RDCPLCPRLVSFRSTWRAAEPSWFNAPVPTFGPQEARLLIVGLAPGLRGANRTGRPFTGD 66

Query: 132 T-GNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSNIEMEICRPI 177
             G++L + L      R                 I       PP N+  +         +
Sbjct: 67  YAGDLLYETLIHFGFARGTYRADPDDGLELIDARIVNAVRCVPPENKPTTEEIRTCRPFL 126

Query: 178 IMRQIELISPKILLFIGNKTKNFF---FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
                ++     ++ +G    +           +     G    +           + H
Sbjct: 127 AAAMAQMPRLSAIVALGKIAHDSVVVTLGERMSRAPFGHGTRREI----GGHTVFGSYH 181


>gi|312114935|ref|YP_004012531.1| uracil-DNA glycosylase superfamily [Rhodomicrobium vannielii ATCC
           17100]
 gi|311220064|gb|ADP71432.1| Uracil-DNA glycosylase superfamily [Rhodomicrobium vannielii ATCC
           17100]
          Length = 226

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 49/179 (27%), Gaps = 23/179 (12%)

Query: 99  TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKML-------------QSI 143
            + +       L+I+G  P     N +G+PF+G   G +L + L                
Sbjct: 33  PVPSFGFPDAPLLIVGLAPGLRGANRTGRPFTGDYAGVLLYETLLDFGFASGTYDQRADD 92

Query: 144 EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF--- 200
            +      I+      PP N+            +     E+   + +L +G    +    
Sbjct: 93  GLSLRACRITNTVRCVPPENKPTPAEAAACRGFLSATIREMPHLRAILALGRIAFDGTLR 152

Query: 201 FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
             +    +     G   +L           + H           + T      + K + 
Sbjct: 153 ALDLKVSQYKFAHGAAHDL---DGGRKLFGSYHCS--RYNTNTGRLTAEMFRDIFKQIA 206


>gi|254303288|ref|ZP_04970646.1| possible bacteriophage DNA polymerase/uracil DNA glycosylase
           [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
 gi|148323480|gb|EDK88730.1| possible bacteriophage DNA polymerase/uracil DNA glycosylase
           [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
          Length = 195

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 67/191 (35%), Gaps = 12/191 (6%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             +LK  + S  +  L                D++ +G  P        K     +G  L
Sbjct: 8   WEDLKFEVGSIGNELLPKDRQEVYIGMGDRNADVLFVGNDPKLYLAEDYKVEPQSSGAFL 67

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++L  +E +    +I+ +S       +N +  E +    ++  QI LISPKI++F+G +
Sbjct: 68  IRLLDVVEYLPETYYITTLSK-REIKIKNFNEEERKKLIDLLFMQILLISPKIVVFLGKE 126

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIKKNTW-----H 249
                  N         G++              T   + +I  +    KK        +
Sbjct: 127 VAQ-LIENKEIDFDNERGQFKKWRGDVETYL---TYDVETVIKARNDSGKKAAIALNFLN 182

Query: 250 ALITLKKALKN 260
            +  +K+ L N
Sbjct: 183 DMKNVKERLNN 193


>gi|294785516|ref|ZP_06750804.1| DNA polymerase, bacteriophage-type [Fusobacterium sp. 3_1_27]
 gi|294487230|gb|EFG34592.1| DNA polymerase, bacteriophage-type [Fusobacterium sp. 3_1_27]
          Length = 195

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 12/191 (6%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             +LK    S  +  L                D++ IG  P        K     +G  L
Sbjct: 8   WEDLKFEAGSIGNELLPKDRQEVYIGMGDRNADVLFIGNDPKLYLAEDYKVEPQSSGAFL 67

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++L  +E +    +I+ +S       +N +  E +    ++  QI LISPKI++F+G +
Sbjct: 68  IRLLDVVEYLPETYYITTLSK-REIKIKNFNEEERKKLIDLLFMQILLISPKIVVFLGKE 126

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIKKNTW-----H 249
                  N         G++              T   + +I  +    KK        +
Sbjct: 127 VAQ-LIENKEIDFDNERGQFKKWRGDVETYL---TYDVETVIKARNDSGKKAAIALNFLN 182

Query: 250 ALITLKKALKN 260
            +  +K+ L N
Sbjct: 183 DMKNIKERLNN 193


>gi|290961266|ref|YP_003492448.1| hypothetical protein SCAB_69151 [Streptomyces scabiei 87.22]
 gi|260650792|emb|CBG73909.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 248

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 54/191 (28%), Gaps = 44/191 (23%)

Query: 84  LRSFHDCHLCSTSL------------------STICATQTEGQDLMIIGYTPSDSD-NIS 124
           +     C                           +         L+I+G  P+    N +
Sbjct: 28  ISGCRACPRLVEWREEVARTKRAAFADQEYWGRPVPGFGPPDAALLIVGLAPAAHGANRT 87

Query: 125 GKPFSG-KTGNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGNRNLSNIE 170
           G+ F+G ++G++L   L                 +    + I+      PP     +  E
Sbjct: 88  GRMFTGDRSGDVLYAALHDVGLASRGTAVGADDGLELYGVRITSPVHCAPP-ANKPTPEE 146

Query: 171 MEICRPIIMRQIELISP--KILLFIGNKTKNFFF------NNDAQKTYQNLGKWSNLCTP 222
            + CRP ++R++EL+ P  + ++ +G                D  +     G        
Sbjct: 147 RDTCRPWLVRELELLRPTLRAVVVLGAFGWQAALPALGEAGWDVPRPRPLFG--HGTHAR 204

Query: 223 HSIIPTLATVH 233
                     H
Sbjct: 205 LDGFDLYGCFH 215


>gi|85374214|ref|YP_458276.1| hypothetical protein ELI_06935 [Erythrobacter litoralis HTCC2594]
 gi|84787297|gb|ABC63479.1| hypothetical protein ELI_06935 [Erythrobacter litoralis HTCC2594]
          Length = 261

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 79/260 (30%), Gaps = 17/260 (6%)

Query: 5   RILSQEQILTIALFYADSGVYW-VFDEPNNEATYE---SQRKEKSIDSAIQPITNIRHIH 60
             LS   I     ++  +G    V DE +     E   S +   +   A  P    +   
Sbjct: 6   SSLSAADIAAAFDWWKLAGADVHVVDEASGWLDGETGTSPQHATAQPQAKAPPPKPKPPA 65

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDCHL------CSTSLSTICATQTEGQDLMIIG 114
                    ++          + L  F    +         +   I    +   +L+++ 
Sbjct: 66  PAPHAALPGLSPVGSETDTWPTELAEFQRWWVEDENFAAQGAFPRIAPRGSADSELLVLL 125

Query: 115 YTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEIC 174
             P   +    + FSG  G +L+  L++  +   Q++ + I P       + S +E    
Sbjct: 126 PQP--EETDGDRLFSGPQGALLNGFLRAAGLDEEQVYFASILP-RHTLRPDWSEVEAAGY 182

Query: 175 RPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHP 234
             +    + L +PK L+  G        +    ++ Q+             IP L     
Sbjct: 183 GRLAAHHVALAAPKRLIVFGRD----ILSLLPHESAQDSANLRIFNHESGSIPLLPARDV 238

Query: 235 QELIQYPLIKKNTWHALITL 254
             L + P  +   W   +  
Sbjct: 239 ANLGRRPGFRARFWQQWLDF 258


>gi|302383620|ref|YP_003819443.1| uracil-DNA glycosylase superfamily [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302194248|gb|ADL01820.1| Uracil-DNA glycosylase superfamily [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 215

 Score = 57.1 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 57/211 (27%), Gaps = 33/211 (15%)

Query: 81  KSLLRSFHDCHLC--------STSLS-------TICATQTEGQDLMIIGYTPSDSD-NIS 124
           ++      DC LC                       +       L++ G  P  +  N +
Sbjct: 4   RTDPEPPRDCPLCPRLVAYREENRRQNPDWWNGPAPSFGDPDARLLVAGLAPGRTGANRT 63

Query: 125 GKPFSGK-TGNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIE 170
           G+PF+G   G +L + L                        I+      PP N+ L   E
Sbjct: 64  GRPFTGDGAGWILYETLIKTGFATGTYDARPDDGLTLVDCMITNAVRCAPPQNKPLPIEE 123

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230
                 +  R   L   K+++ +G+ ++                    +         L 
Sbjct: 124 ATCRPFLKARLDALPRLKVIVTLGDVSRRSVLKAMGLPGSAM-ASGHGMEAEIGGYTLLN 182

Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALKNL 261
           + H   L       + T      + +  + L
Sbjct: 183 SYHCSRL--NTNTGRLTPEMFEAIFRRARAL 211


>gi|84393078|ref|ZP_00991844.1| hypothetical protein V12B01_01742 [Vibrio splendidus 12B01]
 gi|84376330|gb|EAP93212.1| hypothetical protein V12B01_01742 [Vibrio splendidus 12B01]
          Length = 197

 Score = 57.1 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 60/178 (33%), Gaps = 18/178 (10%)

Query: 80  LKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
           L   +R    C   L   +   I A       L+IIG  P    + S  P++  +G  L 
Sbjct: 5   LLKEIRQCRACEPHLSHGANPVIQA--HPNARLLIIGQAPGIKVHESSIPWNDASGERLR 62

Query: 138 KML---QSIEIMRTQIHISMISPWHPPGNR--NLSNIEMEICRPIIMRQIELISPKILLF 192
           + L           ++ I  +   +P   +  +L   +             L + ++ L 
Sbjct: 63  EWLGIDSDTFYDEQKVAIVPMGFCYPGKGKSGDLPPRKECAELWHNKVLQSLPNIQMTLL 122

Query: 193 IGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248
           IG   +N++  N    T  + +  W         +P     HP    +  +  KKN W
Sbjct: 123 IGQYAQNYYLTNKTTSTLTETVRNWQVWAPDFLPLP-----HPSP--RNNIWLKKNPW 173


>gi|315230312|ref|YP_004070748.1| phage SPO1 DNA polymerase-like protein [Thermococcus barophilus MP]
 gi|315183340|gb|ADT83525.1| phage SPO1 DNA polymerase-like protein [Thermococcus barophilus MP]
          Length = 247

 Score = 57.1 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 62/163 (38%), Gaps = 11/163 (6%)

Query: 46  IDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC----HLCSTS-LSTI 100
             +   P       +    Q+A  +A+    L  LK+  +  H       L         
Sbjct: 46  AKTVYNPKERFLVKNEKDKQKAFKLAELYNEL--LKNPTKFCHKEYYEYQLKVKRFEGLP 103

Query: 101 CATQTEGQDLMIIGYTPSDSDN-ISGKPFS-GKTGNMLDKMLQSIEIMRTQIHISMISPW 158
            A    G  ++++G  P       +G  F    +G +L K L S+ I    ++I+ +   
Sbjct: 104 FANGWVGSKVVLVGEAPGRKGCGYTGICFYRDASGMLLRKALFSLGINPDFVYITNVVKC 163

Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
           +PP N+     + E+    + +++E++ PK +  +G   +   
Sbjct: 164 NPPENKLKGVDKRELSL--LKKELEILRPKAIFALGRTAEKAL 204


>gi|163786828|ref|ZP_02181276.1| 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR)
           carboxylase [Flavobacteriales bacterium ALC-1]
 gi|159878688|gb|EDP72744.1| 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR)
           carboxylase [Flavobacteriales bacterium ALC-1]
          Length = 190

 Score = 57.1 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           + +L   +     C           AT      ++IIG  P    + SG P+  ++G  L
Sbjct: 1   MEDLLHNISQCTICKAHLPLGPRPVATAHINSKIIIIGQAPGTKVHDSGIPWDDQSGKKL 60

Query: 137 DKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI--LL 191
            + L              I  +   +P   +         C P    Q+    PK+  ++
Sbjct: 61  RQWLNVTDEQFYNTENFAIIPMGFCYPGKGKTGDLPPRPECAPEWHEQLLEKMPKVELII 120

Query: 192 FIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQ 235
            IG   + ++  + A++T  + +G++         IP     HP 
Sbjct: 121 LIGAYAQKYYLKDKAKRTLTETVGEYKTYLPKFFPIP-----HPS 160


>gi|240102600|ref|YP_002958909.1| Uracil-DNA glycosylase superfamily protein [Thermococcus
           gammatolerans EJ3]
 gi|239910154|gb|ACS33045.1| Uracil-DNA glycosylase superfamily protein [Thermococcus
           gammatolerans EJ3]
          Length = 254

 Score = 57.1 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 40/103 (38%), Gaps = 4/103 (3%)

Query: 101 CATQTEGQDLMIIGYTPSDSDNISG--KPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158
            A    G  ++++G  P            +   +G +L K L S+ I    ++I+     
Sbjct: 110 FANGWTGSKVVLVGEAPGRRGCGKTGVCFYRDASGMLLRKTLFSLGINPDFVYITNAVKC 169

Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
           +PP NR     E       + R++E++ P  +  +G   +   
Sbjct: 170 NPPNNRLSRVPEGAYEL--LARELEILRPGTIFALGRTAERAL 210


>gi|300704296|ref|YP_003745899.1| uracil-DNA glycosylase protein [Ralstonia solanacearum CFBP2957]
 gi|299071960|emb|CBJ43290.1| uracil-dna glycosylase protein [Ralstonia solanacearum CFBP2957]
          Length = 206

 Score = 57.1 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 58/178 (32%), Gaps = 16/178 (8%)

Query: 84  LRSFHDCHLCSTS-----LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDK 138
           L     C LC+          + A       ++I+G  P    + +G P++ ++G+ L +
Sbjct: 17  LHDVRACRLCAGVLPQEPRPIVMAD--RRARVLIVGQAPGRIVHETGIPWNDRSGDRLRQ 74

Query: 139 MLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFI 193
            LQ          +I +  +    P    +        C P   R +    P  K+ L +
Sbjct: 75  WLQIGYDDFYADQRIAVVPMGFCFPGTGPSGDLPPRPECAPQWHRPLLTAMPGLKLALLV 134

Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTWHA 250
           G   + ++ +     +  ++ +                 HP    +     K+N W  
Sbjct: 135 GGYAQRYYLDVPPGGSLTDVVR-HGPVRDAEGRVLFPLPHPSP--RNLAWFKRNPWFD 189


>gi|169350329|ref|ZP_02867267.1| hypothetical protein CLOSPI_01090 [Clostridium spiroforme DSM 1552]
 gi|169293112|gb|EDS75245.1| hypothetical protein CLOSPI_01090 [Clostridium spiroforme DSM 1552]
          Length = 192

 Score = 57.1 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 62/169 (36%), Gaps = 13/169 (7%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSL-STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
               +L   ++    C          +     +   +M IG  PS+  N +  PFS  +G
Sbjct: 2   KEFDKLIREIKECRYCENKFDHEFHPVVW-GHQNAKIMQIGQAPSNKVNQNLVPFSDLSG 60

Query: 134 NMLDKMLQSIE---IMRTQIHISMISPWHPPGNRNLSNIEMEIC--RPIIMRQIELISPK 188
             L +  Q  +     +   +++ ++  +P       +     C  +  + ++++L++ +
Sbjct: 61  KRLLQWYQIDQGTFYNQDIFYLTSLAHCYPGKAAGSGDRPPPKCCYQKWLNQEMKLVNNE 120

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237
           I + +G+ +   FF +                  ++ + T+   HP  L
Sbjct: 121 IYIIVGSYSAKLFFPDKKLTDL-----VFENQRLNNKL-TIVLPHPSPL 163


>gi|71281161|ref|YP_269828.1| phage SPO1 DNA polymerase-related protein [Colwellia
           psychrerythraea 34H]
 gi|71146901|gb|AAZ27374.1| phage SPO1 DNA polymerase-related protein [Colwellia
           psychrerythraea 34H]
          Length = 192

 Score = 57.1 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 59/197 (29%), Gaps = 20/197 (10%)

Query: 75  CSLHELKSLLRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
                L + +R    C       +  +         ++I G  P    + SG PF   +G
Sbjct: 2   SDFSTLLNEVRRCTICASQLEHGVRPVL-QVHPKAKILIAGQAPGLKVHTSGVPFDDASG 60

Query: 134 NMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
             L + L   +       ++ I  +    P   +       + C P   R+  L   K +
Sbjct: 61  KRLREWLGLSREEFYDPEKVAILPMGFCFPGSGKTGDLAPRKECAP-AWREKILAHLKQI 119

Query: 191 ---LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKN 246
              + +G+  + +            +  W            +   HP    +  +  KKN
Sbjct: 120 EVTIVLGSYAQKYHMGLKNASVTDLVKSWETYWPN-----IIPLPHPSP--RNNIWLKKN 172

Query: 247 TW---HALITLKKALKN 260
            W     L  L+  ++ 
Sbjct: 173 PWFEIELLPVLRSRIRE 189


>gi|293400792|ref|ZP_06644937.1| phage SPO1 DNA polymerase-related protein [Erysipelotrichaceae
           bacterium 5_2_54FAA]
 gi|291305818|gb|EFE47062.1| phage SPO1 DNA polymerase-related protein [Erysipelotrichaceae
           bacterium 5_2_54FAA]
          Length = 196

 Score = 57.1 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 48/170 (28%), Gaps = 14/170 (8%)

Query: 75  CSLHELKSLLRSFHDCH-LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
               E+K  L     C  +       I         +  I   PS   + SG PF+  +G
Sbjct: 2   SDFEEIKKELLQCRLCENIFPHEPRPIF-QGNPHAKIFQISQAPSIHVHESGLPFNDASG 60

Query: 134 NMLDKMLQ----SIEIMRTQIHISMISPWHPPGNRN--LSNIEMEICRPIIMRQIELISP 187
             L +       +        +I+ +   +P                   + +++ ++  
Sbjct: 61  KRLRQEWYQISDACFYDPNNFYIASMGHCYPGKKERGGDCLPPKHCAEHWLQKEMAMVDN 120

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237
           ++ + IG    ++ F               N  T H         HP  L
Sbjct: 121 ELYIIIGALAASYIFPKIPFHDL-----VFNTQTLHD-RKAFILPHPSPL 164


>gi|116618023|ref|YP_818394.1| Uracil-DNA glycosylase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116096870|gb|ABJ62021.1| Uracil-DNA glycosylase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 191

 Score = 56.7 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/162 (9%), Positives = 49/162 (30%), Gaps = 19/162 (11%)

Query: 98  STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP 157
           + +  T  +   ++IIG  P      +   ++  +G+ L + L                 
Sbjct: 22  NPVFYT-PKSAKILIIGQAPGKKVQETEIMWNDASGDRLREWLDVDRKQFYDSGNFGFIS 80

Query: 158 WHPPGNRNLSNIEME-----ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN 212
                     + +         +        + + ++++ IG+  + ++ +    +    
Sbjct: 81  MDFYYPGKAKSGDKPPRGSIAKKWHPKLIASMPNLQLIVLIGSYAQKYYLHLARTE---- 136

Query: 213 LGKWSNLCTPHSII--PTLATVHPQ-----ELIQYPLIKKNT 247
             K +++   +          +HP       L + P  +K  
Sbjct: 137 --KITDVVKNYKSYLPKYFPIIHPSPRNNIWLNRNPWFEKEV 176


>gi|169824614|ref|YP_001692225.1| hypothetical protein FMG_0917 [Finegoldia magna ATCC 29328]
 gi|167831419|dbj|BAG08335.1| conserved hypothetical protein [Finegoldia magna ATCC 29328]
          Length = 190

 Score = 56.7 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 55/167 (32%), Gaps = 19/167 (11%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
                ++IIG  P      +G  F+ K+G  L K L   E +        I P       
Sbjct: 31  NPKSKILIIGQAPGGKVEETGILFNDKSGENLVKWLGISEDILHSED-FSIIPMDFYYPG 89

Query: 165 NLSNIEMEICRPIIMRQIE------LISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWS 217
              + + +  R  I ++        L   K+ + IG   + F+  +  +K   + +  + 
Sbjct: 90  KGKSGD-KAPRSFIAKEYHPLLLNELKDIKLTILIGAYAQKFYLKDKFKKNLTETVKSYK 148

Query: 218 NLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALK 259
                +         HP       + + P  ++     L  + K L+
Sbjct: 149 EFLPEY-----FPIAHPSPLNNRWISKNPFFREEVLPDLKKIVKKLR 190


>gi|330827006|ref|YP_004390309.1| phage SPO1 DNA polymerase-like protein [Alicycliphilus
           denitrificans K601]
 gi|329312378|gb|AEB86793.1| phage SPO1 DNA polymerase-related protein [Alicycliphilus
           denitrificans K601]
          Length = 245

 Score = 56.7 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 46/131 (35%), Gaps = 15/131 (11%)

Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI 169
            +++  +P+  +     P +G+ G +LD ML+++ + R                    + 
Sbjct: 104 WLVVLESPTPGE-----PLAGEVGRLLDNMLRAMGLHRHPRTFVATL----GRPAPGLSA 154

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP-HSIIPT 228
           E       + + +  + P ++L +G         +      + LG+            P 
Sbjct: 155 EGVEPAAGLQQALATLRPAMVLVLGLAAARAVLGSR-----EPLGRLRAATHRLADGTPA 209

Query: 229 LATVHPQELIQ 239
           + +  P  L++
Sbjct: 210 VVSYDPAYLLR 220


>gi|319407297|emb|CBI80938.1| conserved hypothetical protein [Bartonella sp. 1-1C]
          Length = 211

 Score = 56.7 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 61/193 (31%), Gaps = 18/193 (9%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTE------GQDLMIIGYTPSDSDNISG 125
           ++   + +L+  + S   C      L  +               + I G  P    + S 
Sbjct: 4   KQCEHIIKLEKDIHSCRVCIKHPHYLPPLPHEPRPVVYLSNTASIAIAGQAPGLRVHESL 63

Query: 126 KPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ- 181
            PF+  +G  L   L         R+   I  +    P  + N S++        I  + 
Sbjct: 64  IPFNDHSGIRLRNWLGVTSDEFYNRSLFAIVPMGFCFPGYDPNKSDLPPRNECREIWHEK 123

Query: 182 --IELISPKILLFIGNKTKNF-FFNNDAQKTYQNLGKWSNLCT--PHSIIPTLATVHPQE 236
               +   K++L IG+    +   N   +   + +  W N+ +         +   HP  
Sbjct: 124 VFQAMPQIKLVLAIGSYAHKWHITNLKYKTVSETVNDWKNILSIRQPRGYNVMPLPHPSW 183

Query: 237 LIQYPLI-KKNTW 248
             +     KK+ W
Sbjct: 184 --RNTFWLKKHPW 194


>gi|315650342|ref|ZP_07903414.1| uracil DNA glycosylase [Eubacterium saburreum DSM 3986]
 gi|315487453|gb|EFU77763.1| uracil DNA glycosylase [Eubacterium saburreum DSM 3986]
          Length = 199

 Score = 56.7 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 55/168 (32%), Gaps = 15/168 (8%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   +MI+G  P      +GK +  K+G+ L + L   +    +  +  + P       
Sbjct: 34  PQNARVMIVGQAPGIKAQEAGKYWFDKSGDRLREWLGVDKKTFYESDVFAVIPMDFYYPG 93

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    +       E+ +  +++ IG   + ++  +  +       K    
Sbjct: 94  KGKSGDLPPRKDFAPKWHPRLLQEMPNIDLIILIGQYAQKYYLGDREKSNLTETVKAYKE 153

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALI-TLKKALKNL 261
             P      L  VHP       L + P  +K     L   +K  L ++
Sbjct: 154 YLP----RLLPLVHPSPRNLIWLKKNPWFEKEVVPMLQAKIKGYLNSI 197


>gi|170748170|ref|YP_001754430.1| uracil-DNA glycosylase superfamily protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170654692|gb|ACB23747.1| uracil-DNA glycosylase superfamily [Methylobacterium radiotolerans
           JCM 2831]
          Length = 205

 Score = 56.7 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 56/189 (29%), Gaps = 19/189 (10%)

Query: 75  CSLHELKSLLRSFHDC--------HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126
            +  +  + LR+   C         L       +    +    L I    P    + +G+
Sbjct: 2   PAFDDTAARLRACRLCRDSPLYGPPLPQEPRPIV--QGSATARLCIASQAPGTRAHRTGQ 59

Query: 127 PFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI-CRPIIMRQI 182
           PF+  +G  L   L   ++      ++ I  +    P  +    +      C      ++
Sbjct: 60  PFTDPSGVRLRAWLGLDEARFYDPARVAIVPMGSCFPGLDAKGGDRPPRRECAERWRAEL 119

Query: 183 ELISPKI--LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
               P++  +L IG   + +            + +W  +         L   HP    + 
Sbjct: 120 FSGLPELELILVIGQYAQGWHLGRMEGGLTGTVRRWREILAEPRRPRVLPLPHPSW--RN 177

Query: 241 PLI-KKNTW 248
               K+  W
Sbjct: 178 NGWLKREPW 186


>gi|145590236|ref|YP_001156833.1| uracil-DNA glycosylase superfamily protein [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|145048642|gb|ABP35269.1| Uracil-DNA glycosylase superfamily [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 194

 Score = 56.7 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 69/199 (34%), Gaps = 19/199 (9%)

Query: 74  ACSLHELKSLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
           + +L +L   +RS   C          I    +    ++I+G  P    + +G PF+  +
Sbjct: 2   SQTLAKLVKEIRSCSLCADHLPLGPRPIIQVGS-SAKILIVGQAPGSRVHETGIPFNDPS 60

Query: 133 GNMLDKML---QSIEIMRTQIHISMISPWHP-PGNRNLSNIEMEICRPIIMRQIEL-ISP 187
           G+ L + +   + +     +I +  +    P  G         E      ++ +E   + 
Sbjct: 61  GDRLREWMGIDKEVFYDEKKIALVPMGFCFPGTGKSGDLPPRPECADTWRVKLLEQLPNI 120

Query: 188 KILLFIGNKTKNFFFNN-DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYP 241
           K+ + +G   + +  +  +     + +  W +          +   HP       L   P
Sbjct: 121 KLTIIVGQYAQAWHLDKGNKDNLTETVMAWKSYWP-----KAIPLPHPSPRNNIWLKNNP 175

Query: 242 LIKKNTWHAL-ITLKKALK 259
             ++    +L   +K  LK
Sbjct: 176 WFEEEVLPSLRRKVKAVLK 194


>gi|110678967|ref|YP_681974.1| hypothetical protein RD1_1663 [Roseobacter denitrificans OCh 114]
 gi|109455083|gb|ABG31288.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
          Length = 198

 Score = 56.7 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 61/184 (33%), Gaps = 17/184 (9%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
                L   +R+   C+      + I     E   ++I+G  P    ++  +PF   +G+
Sbjct: 3   QDFDTLTRQMRACRLCNDLPLGPNPIF-QLDERAKILIVGQAPGRITHLKNRPFDDPSGD 61

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL- 190
            L   L   +S      +I I  +    P    +      +IC     R+  + + K + 
Sbjct: 62  RLRGWLGIEKSAFYGDPRIGIFPMGLCFPGSGPSGDKPPPDICAM-TWREKTMRALKHVE 120

Query: 191 --LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLI 243
             L +G     +   + +++    +    +       +  L   HP       L Q P  
Sbjct: 121 LTLVLGAYAIAWHLPHLSRQ--SVVQAVRHASDGEDRMFVLP--HPSPRNNRWLKQNPWF 176

Query: 244 KKNT 247
           + + 
Sbjct: 177 EADV 180


>gi|260101387|ref|ZP_05751624.1| DNA polymerase [Lactobacillus helveticus DSM 20075]
 gi|260084798|gb|EEW68918.1| DNA polymerase [Lactobacillus helveticus DSM 20075]
          Length = 109

 Score = 56.7 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 34/67 (50%)

Query: 102 ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP 161
            +  +   LMI+G  P  ++ ++  PFSG  G  LDK L+ I + R Q++I+      P 
Sbjct: 42  GSGPKHPLLMIVGEAPGRNEIVNNIPFSGDAGKELDKSLKQIGLSRDQVYITSAVRSRPF 101

Query: 162 GNRNLSN 168
             + + +
Sbjct: 102 SVKKVFS 108


>gi|83593195|ref|YP_426947.1| uracil-DNA glycosylase superfamily protein [Rhodospirillum rubrum
           ATCC 11170]
 gi|83576109|gb|ABC22660.1| Uracil-DNA glycosylase superfamily [Rhodospirillum rubrum ATCC
           11170]
          Length = 214

 Score = 56.7 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/153 (13%), Positives = 46/153 (30%), Gaps = 20/153 (13%)

Query: 88  HDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKML----- 140
            D    + +   + +    G  L+++G  P     N +G+PF+G   G++L   L     
Sbjct: 28  RDFPDWANA--PVPSFGPLGARLLVVGLAPGVRGANRTGRPFTGDYAGDLLYATLIDLGL 85

Query: 141 --------QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192
                       +    + I+      PP N+     ++     +      + + + +L 
Sbjct: 86  MTGVFDRRADDGLTPIDVRITNAVRCVPPENKPTGPEQVACRPFLAAEIAAMPALRGILA 145

Query: 193 IGNKTKNFF---FNNDAQKTYQNLGKWSNLCTP 222
           +G               +      G    +   
Sbjct: 146 LGRVAHEAILRTLGQPLKAHPFAHGALHPMPGG 178


>gi|254172064|ref|ZP_04878740.1| phage SpO1 DNA polymerase-related protein [Thermococcus sp. AM4]
 gi|214033960|gb|EEB74786.1| phage SpO1 DNA polymerase-related protein [Thermococcus sp. AM4]
          Length = 248

 Score = 56.3 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 43/103 (41%), Gaps = 4/103 (3%)

Query: 101 CATQTEGQDLMIIGYTPSDSDNISG--KPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158
            A    G  ++++G  P            +   +G++L K+L  + I    ++I+ +   
Sbjct: 104 FANGWTGSRVVLVGEAPGRRGCGKTGVCFYRDASGSLLRKVLFHLGINPDFVYITNVVKC 163

Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
           +PP NR     E       + R++E++ P+ +  +G   +   
Sbjct: 164 NPPSNRLSRVPEGAYEL--LARELEILEPEAVFALGRTAERAL 204


>gi|218710874|ref|YP_002418495.1| hypothetical protein VS_2958 [Vibrio splendidus LGP32]
 gi|218323893|emb|CAV20254.1| Hypothetical protein VS_2958 [Vibrio splendidus LGP32]
          Length = 197

 Score = 56.3 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 61/178 (34%), Gaps = 18/178 (10%)

Query: 80  LKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
           L   +R    C   L   +   I A       L+IIG  P    + S  P++  +G  L 
Sbjct: 5   LLKEIRQCRACEPHLSHGANPVIQA--HPNARLLIIGQAPGIKVHESSIPWNDASGERLR 62

Query: 138 KML---QSIEIMRTQIHISMISPWHPPGNR--NLSNIEMEICRPIIMRQIELISPKILLF 192
           + L           ++ I  +   +P   +  +L   +             L + ++ L 
Sbjct: 63  EWLGIDSDTFYDEQKVAIVPMGFCYPGKGKSGDLPPRKECAELWHNKVLQSLPNIQMTLL 122

Query: 193 IGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248
           IG   +N++  + A  T  + +  W         +P     HP    +  +  KKN W
Sbjct: 123 IGQYAQNYYLKDKATSTLTETVRNWQAWAPEFLPLP-----HPSP--RNNIWLKKNPW 173


>gi|109900332|ref|YP_663587.1| uracil-DNA glycosylase superfamily protein [Pseudoalteromonas
           atlantica T6c]
 gi|109702613|gb|ABG42533.1| Uracil-DNA glycosylase superfamily [Pseudoalteromonas atlantica
           T6c]
          Length = 169

 Score = 56.3 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 55/150 (36%), Gaps = 13/150 (8%)

Query: 104 QTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ---SIEIMRTQIHISMISPWHP 160
             +   ++I+G  P    + + KP++  +G  L K L            I I  ++  +P
Sbjct: 11  GNQRSKILIVGQAPGIKAHETNKPWNDASGERLRKWLNLDVQHFYNPDNIAILPMAFCYP 70

Query: 161 PGNRNLSNIEMEICRP-IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
               +      + C P    R I  +  K +L IG   +N++  +    T +    W   
Sbjct: 71  GKASSGDKPPRKECAPLWHERLINSMQIKHVLLIGQYAQNYYLQDKRSLTERVK-DWQAY 129

Query: 220 CTPHSIIPTLATVHPQELIQYPLI-KKNTW 248
                ++P     HP    +  +  KKN W
Sbjct: 130 QPRFFVLP-----HPSP--RNNIWLKKNPW 152


>gi|300172892|ref|YP_003772057.1| uracil DNA glycosylase superfamily protein [Leuconostoc
           gasicomitatum LMG 18811]
 gi|299887270|emb|CBL91238.1| Uracil DNA glycosylase superfamily protein [Leuconostoc
           gasicomitatum LMG 18811]
          Length = 190

 Score = 56.3 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/164 (11%), Positives = 51/164 (31%), Gaps = 14/164 (8%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
                ++IIG  P      SG  +   +G+ L + +   + +        + P       
Sbjct: 28  PTSAKIVIIGQAPGLRVQNSGIMWHDASGDRLREWMGISKDVFYNSGRIGVIPMDFYYPG 87

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    +       ++ + ++ + +G+  + ++   ++Q     + K    
Sbjct: 88  KAKSGDLPPRKGIADKWHSRLLKQMPNIQMTILVGSYAQKYYLKLNSQAKITTVIKDYQK 147

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258
             P+        VHP       L + P  ++     L  +   +
Sbjct: 148 YLPNY----FPIVHPSPRNNIWLKKNPWFEQKVVPDLQKMISQI 187


>gi|261210441|ref|ZP_05924735.1| uracil-DNA glycosylase [Vibrio sp. RC341]
 gi|260840499|gb|EEX67065.1| uracil-DNA glycosylase [Vibrio sp. RC341]
          Length = 190

 Score = 56.3 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 59/166 (35%), Gaps = 14/166 (8%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L  L + +R    C   L   + + +         ++IIG  P    + +  P++  +G 
Sbjct: 2   LESLLTEIRQCTVCEPHLPLGA-NPVI-RAHPAAKILIIGQAPGTKVHNTSIPWNDASGE 59

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189
            L + L   +     +  I I  +   +P   R+      + C P+   ++    P  ++
Sbjct: 60  RLRQWLGLDREAFYCQENIAIMPMGLCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQL 119

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
            L IG   ++++  +      + + +W            L   HP 
Sbjct: 120 TLLIGQYAQHYYLPDKPATLTETVQQWQRWAPS-----VLPLPHPS 160


>gi|85373551|ref|YP_457613.1| hypothetical protein ELI_03620 [Erythrobacter litoralis HTCC2594]
 gi|84786634|gb|ABC62816.1| hypothetical protein ELI_03620 [Erythrobacter litoralis HTCC2594]
          Length = 189

 Score = 56.3 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 65/193 (33%), Gaps = 21/193 (10%)

Query: 80  LKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKM 139
           L++ + +   C           AT +    L+IIG  P  + + SG P+   +G+ L + 
Sbjct: 3   LQAEIAACRICADKLAHDPRPVATFSSTARLLIIGQAPGSAVHASGIPWDDPSGDRLREW 62

Query: 140 LQSIEIMRTQIHISMISP---WHP----PGNRNLSNIEMEICRPIIMRQIELISPKILLF 192
               +          + P    +P     G+              ++ ++     ++ L 
Sbjct: 63  AGIDKATMYDPARVALVPMGFCYPGKGKSGDLPPRPECAPAWHERVLAELPCD--RLTLL 120

Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNT 247
           +G+  + ++  +  ++T     +      P          HP       + + P  +K+ 
Sbjct: 121 VGSYAQAYYLPDTRKQTLAERVREFETFLPV----FFPLPHPSWRSTLFMRKNPWFEKDV 176

Query: 248 WHALITLKKALKN 260
              L  LK+ +  
Sbjct: 177 ---LPVLKRRIAE 186


>gi|317121388|ref|YP_004101391.1| uracil-DNA glycosylase [Thermaerobacter marianensis DSM 12885]
 gi|315591368|gb|ADU50664.1| Uracil-DNA glycosylase superfamily [Thermaerobacter marianensis DSM
           12885]
          Length = 328

 Score = 56.3 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 54/168 (32%), Gaps = 35/168 (20%)

Query: 69  SIAQKACSLHELKSLLRSFHDCHL------------------CSTSLSTICATQTEGQDL 110
           S   +   L  +   + +   C                           + +       L
Sbjct: 27  SARDQVDQLARINRDIVACRRCPRLVAYTAEVARTKRRAYRDWDYWGRPVPSFGDPLARL 86

Query: 111 MIIGYTPSDSD-NISGKPFSGK-TGNMLDKML-------------QSIEIMRTQIHISMI 155
           +I+G  P+    N +G+ F+G  +G+ L + L             +   +     +I+  
Sbjct: 87  LIVGLAPAAHGANRTGRMFTGDSSGDWLYRALYRAGFASQPTSTHRDDGLELRDAYITAT 146

Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELIS-PKILLFIGNKTKNFFF 202
               PP N   S  E+  C   + R++E ++  ++++ +G        
Sbjct: 147 CHCAPPDN-RPSRDELAACSAFLARELEALATVRVIVCLGQIAFQGVL 193


>gi|145297626|ref|YP_001140467.1| uracil-DNA glycosylase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142850398|gb|ABO88719.1| uracil-DNA glycosylase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 193

 Score = 56.3 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 63/178 (35%), Gaps = 16/178 (8%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
             L  L   +R+   C               E   L+IIG  P    + SG P+   +G+
Sbjct: 2   NRLDTLFEQIRACRLCEAHLPLGPRPVIRGKESARLLIIGQAPGTRVHASGIPWDDPSGD 61

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNR--NLSNIEMEICRPIIMRQIELISPKI 189
            L   L   ++     ++I I  +   +P   +  +L               + L + ++
Sbjct: 62  RLRHWLGVDKTTFYDESRIAIMPMGLCYPGKGKSGDLPPRPECAPTWHDKVLMLLPNIEL 121

Query: 190 LLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYP 241
            L IG  ++ ++     + +  + + +W++ C     +P     HP       L + P
Sbjct: 122 TLLIGQYSQQYYLGKAGKGSLTETVRQWADYCPAWLPLP-----HPSPRNTFWLRKNP 174


>gi|319408527|emb|CBI82180.1| conserved hypothetical protein [Bartonella schoenbuchensis R1]
          Length = 211

 Score = 56.3 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 63/186 (33%), Gaps = 21/186 (11%)

Query: 72  QKACSLHELKSLLRSFHDC--------HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123
           QK   + +L   +RS   C         L       +    ++   + I G  P    + 
Sbjct: 4   QKCDQIVKLGEQIRSCRVCVERPHYFPPLPHEPKPVV--YLSKTASIAIAGQAPGLRVHE 61

Query: 124 SGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180
           +  PF+ ++G+ L   L    +    R+   I  +    P  ++N S++        I  
Sbjct: 62  TSIPFNDRSGDRLRDWLGVTSNEFYDRSLFAIVPMGFCFPGYDQNKSDLPPRRECQEIWH 121

Query: 181 Q---IELISPKILLFIGNKTKNFFFNN-DAQKTYQNLGKWSNLCT--PHSIIPTLATVHP 234
           +     +   K++L IGN  + +       +   + +  W N+ +         +   HP
Sbjct: 122 EKVFQAMPQIKLVLAIGNYAQKWHIAELKHKTVSETVNDWKNILSIRQPRGYNVMPLPHP 181

Query: 235 QELIQY 240
               + 
Sbjct: 182 SW--RN 185


>gi|167005572|ref|ZP_02271330.1| hypothetical protein Cjejjejuni_05090 [Campylobacter jejuni subsp.
           jejuni 81-176]
          Length = 194

 Score = 56.3 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 67/179 (37%), Gaps = 10/179 (5%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
           ++  +  ELK L+ S   C    T   ++   + +   L+I+      S+N SG   + K
Sbjct: 24  EQVQNFQELKQLVSSCTLCQFSKTRKFSLMEPKIKNAKLLILDVFGQKSENESGILLNSK 83

Query: 132 TGNMLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
            G  L + + Q + +     + S +      G  +  +  ++ C P    +++LI P  L
Sbjct: 84  KGEKLKRYIYQILGLCDEDFYFSYLFKCFCNGKFDDFS--LQSCLPFFWNELKLIQPAFL 141

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249
           L +G  T         +  +   G+             + +     + + P  +K ++ 
Sbjct: 142 LCLGEYTFKSL---GFKDYHILKGEVFAY----KNFFIMPSYDLDFIEKNPSYEKISYK 193


>gi|304386387|ref|ZP_07368720.1| uracil-DNA glycosylase [Pediococcus acidilactici DSM 20284]
 gi|304327744|gb|EFL94971.1| uracil-DNA glycosylase [Pediococcus acidilactici DSM 20284]
          Length = 210

 Score = 56.3 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 49/167 (29%), Gaps = 15/167 (8%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
                ++I+G  P      +   ++ K+G+ L   +              + P       
Sbjct: 47  NPQARILIVGQAPGKRVQDTEIIWNDKSGDRLRDWMGISRETFYNSGKIAVLPMDFYYPG 106

Query: 165 N-----LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                 +   +    +        + + ++ L IG  ++ ++     + T   L K    
Sbjct: 107 KGKSGDIPPRKAVAEKWHPQMVAAMPNIQLTLLIGAYSQRYYLKTTPKTTTTELVKNYQS 166

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALI-TLKKALKN 260
             P         VHP       L + P  ++     L   +   L++
Sbjct: 167 FLP----KYFPLVHPSPRNNIWLARNPWFEEQVVPDLKRRVAAILQD 209


>gi|317180465|dbj|BAJ58251.1| hypothetical protein HPF32_0669 [Helicobacter pylori F32]
          Length = 209

 Score = 55.9 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 60/184 (32%), Gaps = 13/184 (7%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            ++   + + + C     S   +         L  I  TP    +      +     ML+
Sbjct: 37  KQVYEGIENCNLCKRHQNSK-PVIGLFNPTSKLTFITLTP--MLDSQLNFLNNLKAAMLE 93

Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++Q           I  +       N      E+  C   +  Q++  + K+++  G  
Sbjct: 94  SVIQKVFNCPLKDCSILSLLKC--DSNSLNLEEEINACLFHLTWQLDNSASKVIVVFGEI 151

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                 N       ++ G+  +L T H     L+T   +++++ P +KK        + +
Sbjct: 152 LPKRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFKIVLQ 204

Query: 257 ALKN 260
            L  
Sbjct: 205 FLNQ 208


>gi|262404995|ref|ZP_06081547.1| uracil-DNA glycosylase [Vibrio sp. RC586]
 gi|262348834|gb|EEY97975.1| uracil-DNA glycosylase [Vibrio sp. RC586]
          Length = 190

 Score = 55.9 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 58/166 (34%), Gaps = 14/166 (8%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L  L + +R    C   L   + + +         ++IIG  P    + +  P++  +G 
Sbjct: 2   LESLLTEIRQCTVCEPHLPLGA-NPVI-RAHPAAKILIIGQAPGTKVHNTSIPWNDASGE 59

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189
            L + L   +     +  I I  +   +P   R+      + C P+   ++    P  ++
Sbjct: 60  RLRQWLGLDREAFYCQKNIAIMPMGLCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQL 119

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
            L IG   +N++  +      + +  W            L   HP 
Sbjct: 120 TLLIGQYAQNYYLPDKPATLTETVQHWQRWAPS-----VLPLPHPS 160


>gi|302380393|ref|ZP_07268862.1| uracil-DNA glycosylase family protein [Finegoldia magna
           ACS-171-V-Col3]
 gi|302311797|gb|EFK93809.1| uracil-DNA glycosylase family protein [Finegoldia magna
           ACS-171-V-Col3]
          Length = 190

 Score = 55.9 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 56/167 (33%), Gaps = 19/167 (11%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
                ++IIG  P +    +G  F+ K+G  L K L   E +        I P       
Sbjct: 31  NPKSKILIIGQAPGEKVEETGILFNDKSGENLVKWLGISEDILHSED-FSIIPMDFYYPG 89

Query: 165 NLSNIEMEICRPIIMRQIE------LISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWS 217
              + + +  R  I ++        L   K+ + IG   + F+  +  +K   + +  + 
Sbjct: 90  KGKSGD-KAPRSFIAKEYHPLLLNELKDIKLTILIGAYAQKFYLKDKFKKNLTETVKSYK 148

Query: 218 NLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALK 259
                +         HP       + + P  ++     L  + K ++
Sbjct: 149 EFLPEY-----FPIAHPSPLNNRWISKNPFFREEVLPDLKKIVKKVR 190


>gi|153826742|ref|ZP_01979409.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|149739457|gb|EDM53695.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
          Length = 190

 Score = 55.9 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 61/166 (36%), Gaps = 14/166 (8%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L  L + +R    C   L   + + +         ++IIG  P    + +  P++  +G+
Sbjct: 2   LESLLTEIRQCTVCEPHLPLGA-NPVI-RAHSAAKILIIGQAPGTKVHNTSIPWNDASGD 59

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189
            L + L   +       +I I  +   +P   R+      + C P+   ++    P  ++
Sbjct: 60  RLRQWLDLDRDTFYCEEKIAIMPMGLCYPGRGRSGDLPPRKECAPLWHAKVLEQLPNRQL 119

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
            L IG   ++++ ++      + + +W            L   HP 
Sbjct: 120 TLLIGQYAQHYYLSDKPSTLTETVQQWQRWAPS-----VLPLPHPS 160


>gi|163795221|ref|ZP_02189189.1| Uracil-DNA glycosylase superfamily protein [alpha proteobacterium
           BAL199]
 gi|159179619|gb|EDP64148.1| Uracil-DNA glycosylase superfamily protein [alpha proteobacterium
           BAL199]
          Length = 195

 Score = 55.9 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 56/171 (32%), Gaps = 16/171 (9%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            +L +L + +R+   C                   L+IIG  P    + SG P++ ++G+
Sbjct: 2   NALTDLLTRIRACRHCEAHLPLGPRPVLVAHPQARLLIIGQAPGTKVHESGIPWNDRSGD 61

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHP-----PGNRNLSNIEMEICRPIIMRQIELIS 186
            L   L           +I I  +   +P      G+         +    ++  +  + 
Sbjct: 62  RLRDWLGVKHDTFYNDPRIAIVPMGFCYPGVLPNGGDAPPRPECAPMWHDAVLAHLPDV- 120

Query: 187 PKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQE 236
            ++++  G   +  +     ++T  + +  W            +   HP  
Sbjct: 121 -ELVVLAGMYAQARYLGKTRKRTLTETVAAWREY-----GPKFIPLPHPSW 165


>gi|332142727|ref|YP_004428465.1| uracil-DNA glycosylase [Alteromonas macleodii str. 'Deep ecotype']
 gi|332142851|ref|YP_004428589.1| uracil-DNA glycosylase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327552749|gb|AEA99467.1| uracil-DNA glycosylase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327552873|gb|AEA99591.1| uracil-DNA glycosylase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 195

 Score = 55.9 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 53/163 (32%), Gaps = 12/163 (7%)

Query: 78  HELKSLLRSFHDCHLCSTSL-STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
            EL +  R+   C        + I +T  +   ++IIG  P    + SG  F+  +G+ L
Sbjct: 9   DELAAEARNCALCAQYLPHTPNPIFST-AKFAKVLIIGQAPGLKAHESGIAFNDASGDRL 67

Query: 137 DKML---QSIEIMRTQIHISMISPWHP-PGNRNLSNIEMEICRPIIMRQIELISPKILLF 192
              L   +        I I  +    P   N   +    E         +  I P++ ++
Sbjct: 68  RSWLSVSKPTFYNPKLISILPMGFCFPGYKNGADAPPRKECAPTWHQAFLSQIRPELTVY 127

Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
           IG   + ++       T             ++    L   HP 
Sbjct: 128 IGRYAQQYYLPEYKNLTDA----VYTTFAANAGHVALP--HPS 164


>gi|288956932|ref|YP_003447273.1| uracil-DNA glycosylase [Azospirillum sp. B510]
 gi|288909240|dbj|BAI70729.1| uracil-DNA glycosylase [Azospirillum sp. B510]
          Length = 203

 Score = 55.9 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 48/187 (25%), Gaps = 17/187 (9%)

Query: 67  ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126
           +D   Q   +L  L +  R+   C                   L+I+G  P    + SG 
Sbjct: 2   SDETRQGGPALDRLFAQARACTLCEAALPHGCRPVLRGGATARLLIVGQAPGARVHASGI 61

Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISP---WH---PPGNRNLSNIEMEICRPIIMR 180
           P+   +G+ L K L              + P    +    P   +               
Sbjct: 62  PWDDASGDRLRKWLAMDSTTFYDESRIAVVPMGLCYPGTMPKGGDYPPRPECAPLWHPPL 121

Query: 181 QIELISPKILLFIGNKT-KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHP----- 234
              L   ++ L IG      +          + +  W            +   HP     
Sbjct: 122 LEALSGIRLTLLIGQYAQARYLGGRRKATMTETVASWREY-----GPAFIPLPHPSWRNT 176

Query: 235 QELIQYP 241
             L + P
Sbjct: 177 AWLNRNP 183


>gi|154247758|ref|YP_001418716.1| uracil-DNA glycosylase superfamily protein [Xanthobacter
           autotrophicus Py2]
 gi|154161843|gb|ABS69059.1| Uracil-DNA glycosylase superfamily [Xanthobacter autotrophicus Py2]
          Length = 233

 Score = 55.9 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 53/180 (29%), Gaps = 36/180 (20%)

Query: 89  DCHLCS--------------TSLS-TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT 132
           DC LC                  +  + A   E   L+I+G  P     N +G+PF+G  
Sbjct: 25  DCPLCPRLADFRHDWQAAEPGWHNAPVPAFGPEDARLLIVGLAPGLRGANRTGRPFTGDY 84

Query: 133 -GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPII 178
            G++L   L                    T   I       PP N   +  E+  CRP +
Sbjct: 85  AGDLLYATLIEYGFATGTYAAHPEDGLTLTDARIVNAVRCVPPQN-KPTPEEIRTCRPFL 143

Query: 179 MR-QIELISPKILLFIGNKTKN---FFFNNDAQKTYQNLGKWSNLCTPHSI-IPTLATVH 233
                 +     ++ +G    +         A +     G    +       +   A+ H
Sbjct: 144 SAPMAAMPRLAAIVTLGKIAHDSTLAALGQKASRLKFGHGVADTITDGTLGPVRLFASYH 203


>gi|148981200|ref|ZP_01816326.1| hypothetical protein VSWAT3_16095 [Vibrionales bacterium SWAT-3]
 gi|145960956|gb|EDK26282.1| hypothetical protein VSWAT3_16095 [Vibrionales bacterium SWAT-3]
          Length = 197

 Score = 55.9 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 64/178 (35%), Gaps = 18/178 (10%)

Query: 80  LKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
           L + +R    C   L   +   I A       L+IIG  P    + S  P++  +G  L 
Sbjct: 5   LLTEIRQCRACEPHLSHGANPVIQA--HPNARLLIIGQAPGIKVHESSIPWNDASGERLR 62

Query: 138 KML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLF 192
           + L           ++ I  +   +P   ++      + C  +  +++    P  ++ L 
Sbjct: 63  EWLGIGSDTFYDEQKVAIVPMGFCYPGKGKSGDLPPRKECAELWHKKVLQSLPNIQMTLL 122

Query: 193 IGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248
           IG   +N++      KT  + +  W         +P     HP    +  +  KKN W
Sbjct: 123 IGQYAQNYYLKERTTKTLTETVKNWQAWAPEFLPLP-----HPSP--RNNIWLKKNPW 173


>gi|27364623|ref|NP_760151.1| Uracil-DNA glycosylase [Vibrio vulnificus CMCP6]
 gi|320155017|ref|YP_004187396.1| hypothetical protein VVM_00329 [Vibrio vulnificus MO6-24/O]
 gi|27360742|gb|AAO09678.1| Uracil-DNA glycosylase [Vibrio vulnificus CMCP6]
 gi|319930329|gb|ADV85193.1| hypothetical protein VVMO6_00171 [Vibrio vulnificus MO6-24/O]
          Length = 197

 Score = 55.9 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 19/183 (10%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L  L + +R+   C   L   +   + A       ++IIG  P    + +  P++  +GN
Sbjct: 3   LEPLLTQIRACQVCASALPLGANPVVQA--HSEAKILIIGQAPGTKVHHTSIPWNDASGN 60

Query: 135 MLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189
            L   L           QI I  +   +P   ++      + C P+    +    P  ++
Sbjct: 61  RLRVWLDIEKPTFYDPKQIAIMPMGFCYPGRGQSGDLPPRKECAPLWHEALLKHLPNIEL 120

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIK 244
            L IG   +N + +N  +   + +  W      +  +P     HP       L + P  +
Sbjct: 121 TLLIGQYAQNRYLSNKPKTLTETVQNWQAWLPDYLPLP-----HPSPRNTLWLRKNPWFE 175

Query: 245 KNT 247
           + T
Sbjct: 176 EQT 178


>gi|319405735|emb|CBI79358.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
          Length = 211

 Score = 55.9 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 63/193 (32%), Gaps = 18/193 (9%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTE------GQDLMIIGYTPSDSDNISG 125
           Q+   + +L+  + S   C      L  +               + I G  P    + S 
Sbjct: 4   QQCDHIIKLEKDIHSCRVCIKHPHYLPPLPHEPRPVVYLSNTASIAIAGQAPGLRVHESF 63

Query: 126 KPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ- 181
            PF+ ++G  L   L         R+   I  +    P  ++N S++        I  + 
Sbjct: 64  IPFNDRSGVRLRNWLGVTSDEFYSRSLFAIVPMGFCFPGYDQNKSDLPPRSECKEIWHEK 123

Query: 182 --IELISPKILLFIGNKTKNF-FFNNDAQKTYQNLGKWSNLCT--PHSIIPTLATVHPQE 236
               +   K++L IG+    +   N   +   + +  W N+ +         +   HP  
Sbjct: 124 VFQAMPQIKLVLAIGSYAHKWHITNLQHKTVSETVSDWKNILSIRQPRGYNVMPLPHPSW 183

Query: 237 LIQYPLI-KKNTW 248
             +     KK+ W
Sbjct: 184 --RNTFWFKKHPW 194


>gi|308063559|gb|ADO05446.1| hypothetical protein HPSAT_03540 [Helicobacter pylori Sat464]
          Length = 192

 Score = 55.9 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 59/184 (32%), Gaps = 13/184 (7%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            ++   + + + C     S   +         L  I  TP    +      +     ML+
Sbjct: 20  KQVYESIENCNLCKRHQNSK-PVIGLFNPTSKLTFITLTP--MLDSQLNFLNNLKAAMLE 76

Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++Q           I  +       N      E+  C   +  Q++  + K+++  G  
Sbjct: 77  SIIQKVFNCPLKDCSILSLLKC--DSNSLNLEEEINACLFHLTWQLDNSASKVIVVFGKI 134

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                 N       ++ G+  +L T H     L+T   +++++ P +KK          +
Sbjct: 135 LPQRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFKIALQ 187

Query: 257 ALKN 260
            L  
Sbjct: 188 FLNQ 191


>gi|317177467|dbj|BAJ55256.1| hypothetical protein HPF16_0659 [Helicobacter pylori F16]
          Length = 206

 Score = 55.9 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 60/184 (32%), Gaps = 13/184 (7%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            ++   + + + C     S   +         L  I  TP    +      +     ML+
Sbjct: 34  KQVYEGIENCNLCKRHQNSK-PVIGLFNPTSKLTFITLTP--MLDSQLNFLNNLKAAMLE 90

Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++Q           I  +       N      E+  C   +  Q++  + K+++  G  
Sbjct: 91  SIIQKVFNYPLKDCSILSLLKC--DSNSLNLEEEINACLFHLTWQLDNSASKVIVVFGEI 148

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                 N       ++ G+  +L T H     L+T   +++++ P +KK        + +
Sbjct: 149 LPKRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFKIVLQ 201

Query: 257 ALKN 260
            L  
Sbjct: 202 FLNQ 205


>gi|121602558|ref|YP_989136.1| hypothetical protein BARBAKC583_0849 [Bartonella bacilliformis
           KC583]
 gi|120614735|gb|ABM45336.1| conserved hypothetical protein [Bartonella bacilliformis KC583]
          Length = 211

 Score = 55.9 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 65/186 (34%), Gaps = 21/186 (11%)

Query: 72  QKACSLHELKSLLRSFHDC--------HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123
           Q+   + +L   + S   C         L       + A  ++   + I G  P    + 
Sbjct: 4   QRCDKIIKLDKKIHSCRICITNPRYYPPL-PHEPRPV-AYLSDTASIAIAGQAPGLRVHE 61

Query: 124 SGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSN-IEMEICRPIIM 179
           S  PF+ ++G  L   L   ++    R+   I  +    P  ++N S+      C+ +  
Sbjct: 62  SSIPFNDRSGETLRNWLSVTRNQFYDRSLFAIVPMGFCFPGYDQNKSDLPPRRECQEMWH 121

Query: 180 RQIELISP--KILLFIGNKTKNF-FFNNDAQKTYQNLGKWSNLCT--PHSIIPTLATVHP 234
            ++    P  K++L IG+  + +       +   + +  W N+ +         +   HP
Sbjct: 122 EEVFQAMPQIKLVLAIGSYAQKWHITGLKHKTVSETVSDWKNILSIRQPRGYNVIPLPHP 181

Query: 235 QELIQY 240
               + 
Sbjct: 182 SW--RN 185


>gi|92117781|ref|YP_577510.1| uracil-DNA glycosylase superfamily protein [Nitrobacter
           hamburgensis X14]
 gi|91800675|gb|ABE63050.1| Uracil-DNA glycosylase superfamily [Nitrobacter hamburgensis X14]
          Length = 242

 Score = 55.9 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 54/210 (25%), Gaps = 42/210 (20%)

Query: 57  RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLC----------STS-----LSTIC 101
               +    +A+     A +     +      DC LC                   + + 
Sbjct: 3   TTSRTDTQSRAEPALSGANT-----ASTEPGRDCPLCPRLVDYRLSVRAREPDWFNAPVP 57

Query: 102 ATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEI-------------M 146
           +       L+I+G  P     N +G+PF+G   G++L   L                   
Sbjct: 58  SFGDPDAALLIVGLAPGVQGANRTGRPFTGDYAGDLLYATLLKYGFAAGHYQARVDDGLT 117

Query: 147 RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF---FN 203
                IS      PP N+ L          +      +   + ++ +G    +       
Sbjct: 118 LVDCRISNAVRCVPPQNKPLPAEINTCRAFLSATLAAMPKLRAIVALGRIAHDSVVKALG 177

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
             A+      G           +    + H
Sbjct: 178 LRAKAAPFAHGAVH----RAGAVRLYDSYH 203


>gi|85708087|ref|ZP_01039153.1| uracil-DNA glycosylase [Erythrobacter sp. NAP1]
 gi|85689621|gb|EAQ29624.1| uracil-DNA glycosylase [Erythrobacter sp. NAP1]
          Length = 194

 Score = 55.9 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/198 (12%), Positives = 61/198 (30%), Gaps = 28/198 (14%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICA-----TQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
             L   + +   C     +             +    ++I+G  P    + SG P+   +
Sbjct: 7   EALHREIAACTLC-----AKHLPLGPRPVVQFSPNSRILIVGQAPGTRVHASGIPWDDDS 61

Query: 133 GNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP-- 187
           G+ L   L   +       ++ +  +   +P   +       + C P    +I  + P  
Sbjct: 62  GDRLRGWLGLDKDAFYDPAKVALMPMGFCYPGKAKGGDAPPRKECAPAWHDRILALLPED 121

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ-----YPL 242
           ++ L +G   +  +     + +  +      +       P     HP   ++      P 
Sbjct: 122 RLTLLVGAYAQAAYLPATRKLSMTDR-----VKRGADFAPFFPLPHPAWRVRMWMAKNPW 176

Query: 243 IKKNTWHALITLKKALKN 260
            +  T   L  L++ +  
Sbjct: 177 FEAET---LPALRREIAA 191


>gi|328543521|ref|YP_004303630.1| Uracil DNA glycosylase superfamily [polymorphum gilvum SL003B-26A1]
 gi|326413265|gb|ADZ70328.1| Uracil DNA glycosylase superfamily [Polymorphum gilvum SL003B-26A1]
          Length = 222

 Score = 55.5 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/197 (11%), Positives = 51/197 (25%), Gaps = 30/197 (15%)

Query: 86  SFHDCHLCSTSLS------------TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT 132
               C                     + +       L+++G  P     N +G+PF+G  
Sbjct: 16  DCDRCPRLVAFRHEHQRAFPNWFNAPVPSFAAPDPRLLVVGLAPGLRGANRTGRPFTGDY 75

Query: 133 -GNMLDKMLQSIEIMRTQIH-------------ISMISPWHPPGNRNLSNIEMEICRPII 178
            G++L + +      R +               I+      PP N+ + +        + 
Sbjct: 76  AGDLLYETMLDFGFARGRYEARPDDGLELVGAAITNAVRCVPPANKPVGSEIANCRSFLF 135

Query: 179 MRQIELISPKILLFIGNKTKNFFFNN-DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237
                    + +L +G      F +  D ++     G           +    + H    
Sbjct: 136 ATLDAYPGLRAVLALGRIAHETFLSTLDIRRADFAFGHGRRHDLGTRSLVLFDSYHCS-- 193

Query: 238 IQYPLIKKNTWHALITL 254
                  + T      +
Sbjct: 194 RYNTNTGRLTREMFRAV 210


>gi|270290892|ref|ZP_06197116.1| conserved hypothetical protein [Pediococcus acidilactici 7_4]
 gi|270280952|gb|EFA26786.1| conserved hypothetical protein [Pediococcus acidilactici 7_4]
          Length = 195

 Score = 55.5 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 49/167 (29%), Gaps = 15/167 (8%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
                ++I+G  P      +   ++ K+G+ L   +              + P       
Sbjct: 32  NPQARILIVGQAPGKRVQDTEIIWNDKSGDRLRDWMGISRETFYNSGKIAVLPMDFYYPG 91

Query: 165 N-----LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                 +   +    +        + + ++ L IG  ++ ++     + T   L K    
Sbjct: 92  KGKSGDIPPRKAVAEKWHPQMVAAMPNIQLTLLIGAYSQRYYLKTTPKTTTTELVKNYQS 151

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALI-TLKKALKN 260
             P         VHP       L + P  ++     L   +   L++
Sbjct: 152 FLP----KYFPLVHPSPRNNIWLARNPWFEEQVVPDLKRRVAAILQD 194


>gi|167949186|ref|ZP_02536260.1| hypothetical protein Epers_22861 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 170

 Score = 55.5 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 47/169 (27%), Gaps = 19/169 (11%)

Query: 109 DLMIIGYTPSDSDNISG-KPFSGKT-GNMLDKMLQSIEI-------------MRTQIHIS 153
            L+++G  P      +  +PF+G   G +L + L                        I+
Sbjct: 1   RLLLVGLAPGMHGANASGRPFTGDHAGILLYQTLHRYGFASRAESVAADDDLQLFDCRIT 60

Query: 154 MISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQK-TYQN 212
                 PP N+            +      L    ++L +G    N       QK     
Sbjct: 61  NAVKCLPPQNKPQGVEINNCNHYLSQELASLEKGAVVLALGCIAHNAVLKASGQKLKAFA 120

Query: 213 LGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
            G  +    P+  +  L + H          K+ T      +    + L
Sbjct: 121 FGHAAEHRLPN-GLRLLDSYHCS--RYNTQTKRLTTAMFEQVFARAREL 166


>gi|308125690|ref|ZP_05776738.2| uracil DNA glycosylase superfamily [Vibrio parahaemolyticus K5030]
 gi|308115536|gb|EFO53076.1| uracil DNA glycosylase superfamily [Vibrio parahaemolyticus K5030]
          Length = 164

 Score = 55.5 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 57/148 (38%), Gaps = 13/148 (8%)

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ---SIEIMRTQIHISMISPWHPPGN 163
              ++IIG  P    + +  P++  +G+ L + L     +     +I I  +   +P   
Sbjct: 7   NARILIIGQAPGTKVHSTSIPWNDPSGDRLRQWLDIDKDVFYDPNKIAIVPMGFCYPGKG 66

Query: 164 RNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221
            +      + C P   ++I    P  ++ L IG  ++ ++  N  +   Q + +W +   
Sbjct: 67  NSGDLPPRKECAPTWHKKILEQLPNIELTLLIGQFSQQYYLTNKPKTLTQTVQQWQDWEP 126

Query: 222 PHSIIPTLATVHPQELIQYPLI-KKNTW 248
                  +   HP    +  L  KKN W
Sbjct: 127 EF-----IPLPHPSP--RNTLWLKKNPW 147


>gi|91977115|ref|YP_569774.1| uracil-DNA glycosylase superfamily protein [Rhodopseudomonas
           palustris BisB5]
 gi|91683571|gb|ABE39873.1| Uracil-DNA glycosylase superfamily [Rhodopseudomonas palustris
           BisB5]
          Length = 225

 Score = 55.5 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 54/199 (27%), Gaps = 22/199 (11%)

Query: 51  QPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
                     S  + + D        L   +   R      L   +   + +   +   L
Sbjct: 2   TATRGPLAAVSRPIAEPDRDCPDCPRLAAFRREQRLRE--PLWHNA--PVPSFGDDDATL 57

Query: 111 MIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEI-------------MRTQIHISMI 155
           +I+G  P     N +G+PF+G   G++L   L                     +  IS  
Sbjct: 58  LIVGLAPGLQGANRTGRPFTGDYAGDLLYATLIEYGFAKGNYEARPDDGLRLVRCRISNA 117

Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQ-NLG 214
               PP N+ L        R +      +   + L+ +G    +        +  Q   G
Sbjct: 118 VRCVPPQNKPLPIEINTCRRFLATTIETMPKLRALVMLGRIAHDSTLKAVGLRASQAPFG 177

Query: 215 KWSNLCTPHSIIPTLATVH 233
                      +    + H
Sbjct: 178 --HGAVHQAGALRLYDSYH 194


>gi|254419101|ref|ZP_05032825.1| Uracil DNA glycosylase superfamily [Brevundimonas sp. BAL3]
 gi|196185278|gb|EDX80254.1| Uracil DNA glycosylase superfamily [Brevundimonas sp. BAL3]
          Length = 212

 Score = 55.5 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 50/155 (32%), Gaps = 30/155 (19%)

Query: 88  HDCHLC--------STSLS-------TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131
            DC LC          +            +       L++ G  P  +  N +G+PF+G 
Sbjct: 9   RDCPLCPRLVEYRQENARQNPDWWNGPAPSFGDPNARLLVAGLAPGRTGANRTGRPFTGD 68

Query: 132 T-GNMLDKMLQSIEIMRTQ-------------IHISMISPWHPPGNRNLSNIEMEICRPI 177
             G +L   L+     +                 I+      PPGN+ L   E      +
Sbjct: 69  HAGWLLYDTLKKAGFAQGHYDPNGDDDLTLVDCMITNAVRCAPPGNKPLPIEETTCRPFL 128

Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN 212
           I R   L + K+++ +G+ ++        +     
Sbjct: 129 IDRLALLPNLKVIVTLGDVSRRNILKAFGRPASAM 163


>gi|163850945|ref|YP_001638988.1| uracil-DNA glycosylase superfamily protein [Methylobacterium
           extorquens PA1]
 gi|163662550|gb|ABY29917.1| Uracil-DNA glycosylase superfamily [Methylobacterium extorquens
           PA1]
          Length = 232

 Score = 55.5 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 54/186 (29%), Gaps = 16/186 (8%)

Query: 65  QQADSIAQKACSLHELKSLLRSFHDC--------HLCSTSLSTICATQTEGQDLMIIGYT 116
             + +++    +  +  + LR+   C         L       +    +    L+I    
Sbjct: 16  PISAAMSAAPENFEDTAARLRACRLCRDAPLYGAPLPHEPRPVV--QGSATARLLIASQA 73

Query: 117 PSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHP---PGNRNLSNIE 170
           P +  + SG PFS  +G  L   L   ++      ++ I  +    P       +     
Sbjct: 74  PGNRAHRSGIPFSDPSGRRLRDWLGLDEAAFYDPARVAILPMGACFPGLDAKGGDRPPRR 133

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230
                        L    ++L IG   + +          + + +W  +    +    L 
Sbjct: 134 ECAPAWRADLLAGLPQLDLILVIGQYAQAWHLGPRPGGLTETVARWRAILDASARPRVLP 193

Query: 231 TVHPQE 236
             HP  
Sbjct: 194 LPHPSW 199


>gi|297624092|ref|YP_003705526.1| Uracil-DNA glycosylase superfamily [Truepera radiovictrix DSM
           17093]
 gi|297165272|gb|ADI14983.1| Uracil-DNA glycosylase superfamily [Truepera radiovictrix DSM
           17093]
          Length = 228

 Score = 55.5 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/220 (12%), Positives = 57/220 (25%), Gaps = 45/220 (20%)

Query: 82  SLLRSFHDCH------------------LCSTSLSTICATQTEGQDLMIIGYTPSDSD-N 122
             L S   C                   L       +         ++++G  P     N
Sbjct: 10  EALLSCTRCPRLVAHREAVARVKRRAYRLEPYWGRPVPGFGDPEARIVLLGLAPGAHGSN 69

Query: 123 ISGKPFSGK-TGNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLSN 168
            +G+ F+G  +G  L   L             +   ++   + I+  +   PP N+    
Sbjct: 70  RTGRMFTGDGSGAFLYPALWRAGLANQPRAAHRDDGLVLRGVFITAAARCVPPDNKPTRE 129

Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ-------KTYQNLGKWSNLCT 221
                   +      L + K+++ +G      +    ++       +     G       
Sbjct: 130 ELQSCRGWLARDFAGLPNVKVVVALGRVAHESYLELISRGQRLVKARYGFAHGALHTFAG 189

Query: 222 PHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
                P L   H    +Q     + T      +    K L
Sbjct: 190 AP---PLLDAYHVS--LQNTNTGRLTPEMFDAVLARAKEL 224


>gi|74316863|ref|YP_314603.1| hypothetical protein Tbd_0845 [Thiobacillus denitrificans ATCC
           25259]
 gi|74056358|gb|AAZ96798.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
           25259]
          Length = 228

 Score = 55.5 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 64/215 (29%), Gaps = 19/215 (8%)

Query: 43  EKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICA 102
             S  S+  P         P  Q A   A       +L + + +   C            
Sbjct: 2   RSSASSSNTPAEPHGTGTVPRGQSAAGGA-----FADLLARVAACTACAEHLPHPPRPVL 56

Query: 103 TQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH 159
             +    L+I+G  P    + +G P++  +G+ L   L   +      ++I I      +
Sbjct: 57  RASPSARLLIVGQAPGRRVHATGIPWNDPSGDRLRDWLGLTRDAFYDASRIAIVPAGLCY 116

Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKI--LLFIGNKTKNFFFNNDAQKT-YQNLGKW 216
           P             C       +    PKI   L IG   + ++     + T  + +  W
Sbjct: 117 PGTVGGSDLPPRAECASRWQPPLRAAMPKIGLTLLIGAYAQAYYLGRQRRTTLTETVEAW 176

Query: 217 SNLCTPHSIIPTLATVHPQELIQYPLI-KKNTWHA 250
            +L             HP    +     K++ W  
Sbjct: 177 RDLDPA-----LFPLPHPSP--RNRRWFKQHPWFD 204


>gi|317010871|gb|ADU84618.1| hypothetical protein HPSA_03075 [Helicobacter pylori SouthAfrica7]
          Length = 196

 Score = 55.5 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 59/183 (32%), Gaps = 13/183 (7%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            ++   + + + C     S   +         +  I  TP    +      +     ML+
Sbjct: 24  KQVHEGIENCNLCKRYQHSK-PVVGLLNAQSKITFITLTP--MLDSQLHFLNNLKALMLE 80

Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++Q           I  +       N      E+  C P +  Q++  + K+++  G  
Sbjct: 81  SIIQKVFGYSLKDCTILSLLKC--DSNSLNLEEEINACLPHLTWQLDNSASKVIILFGEI 138

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                 N       +  G+  +L T +     L+T   +++++ P +KK          +
Sbjct: 139 LLKRLLNLSK---EETFGRIVSLKTKN----FLSTYALEDMLKNPTLKKEALTHFKIALQ 191

Query: 257 ALK 259
            L 
Sbjct: 192 FLN 194


>gi|291613958|ref|YP_003524115.1| uracil-DNA glycosylase superfamily [Sideroxydans lithotrophicus
           ES-1]
 gi|291584070|gb|ADE11728.1| Uracil-DNA glycosylase superfamily [Sideroxydans lithotrophicus
           ES-1]
          Length = 216

 Score = 55.5 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 44/155 (28%), Gaps = 19/155 (12%)

Query: 98  STICATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIE----------- 144
             + +    G  L+I+G  P     N +G+PF+G   G++L   L               
Sbjct: 31  KPVPSFGDAGSPLLIVGLAPGMHGANRTGRPFTGDYAGDLLYSTLHKFGLATAAEPLDAN 90

Query: 145 ------IMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTK 198
                 +      I+      PP N+       +    ++     +     +L +G    
Sbjct: 91  KQANPRLKLKSCRITNAVRCLPPQNKPEPAEVRQCNGYLVQELAAVPQGAAILALGTVAH 150

Query: 199 NFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
                  A K        S      + +    + H
Sbjct: 151 EAVLRACALKVKGYKFAHSARHELPNGLKLYDSYH 185


>gi|255264768|ref|ZP_05344110.1| uracil DNA glycosylase superfamily protein [Thalassiobium sp.
           R2A62]
 gi|255107103|gb|EET49777.1| uracil DNA glycosylase superfamily protein [Thalassiobium sp.
           R2A62]
          Length = 201

 Score = 55.5 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 61/205 (29%), Gaps = 28/205 (13%)

Query: 74  ACSLHELKSLLRSFHDCHLCSTSLST------ICATQTEGQDLMIIGYTPSDSDNISGKP 127
             +       +     C        T      +      G  ++I G  P    + SG+P
Sbjct: 5   PNTPETRFDAVAKCTYCADWFQKTHTGHPPRSVLWA-EPGARILIAGQAPGARVHASGRP 63

Query: 128 FSGKTGNMLDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMR 180
           F+  +G+ L   +    +    R++I I  ++   P     G+      E        + 
Sbjct: 64  FTDPSGDRLRGWMDVDDATFYDRSKISIVPMAFCFPGYNEKGHDLPPPKECAKLWRAGIL 123

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
           +       + L +G   +++            +G W +              HP    + 
Sbjct: 124 EALGPF-DLTLLVGGYAQDWHIG--KGTVTARVGAWRDHAPH-----VFPLPHPSW--RT 173

Query: 241 PLI-KKNTW---HALITLKKALKNL 261
               KKN W     +  L+  +K +
Sbjct: 174 TGWVKKNPWFGGELIPELRMRIKEV 198


>gi|37681333|ref|NP_935942.1| uracil-DNA glycosylase [Vibrio vulnificus YJ016]
 gi|37200084|dbj|BAC95913.1| uracil-DNA glycosylase [Vibrio vulnificus YJ016]
          Length = 197

 Score = 55.5 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 19/183 (10%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L  L + +R+   C   L   +   + A       ++IIG  P    + +  P++  +GN
Sbjct: 3   LEPLLTQIRACQVCASALPLGANPVVQA--HSEAKILIIGQAPGTKVHHTSIPWNDASGN 60

Query: 135 MLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189
            L   L           QI I  +   +P   ++      + C P+    +    P  ++
Sbjct: 61  RLRAWLDIEKPTFYDPKQIAIMPMGFCYPGRGQSGDLPPRKECAPLWHEALLKHLPNIEL 120

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIK 244
            L IG   +N + +N  +   + +  W      +  +P     HP       L + P  +
Sbjct: 121 TLLIGQYAQNRYLSNKPKTLTETVQNWQAWLPDYLPLP-----HPSPRNTLWLRKNPWFE 175

Query: 245 KNT 247
           + T
Sbjct: 176 EQT 178


>gi|295839515|ref|ZP_06826448.1| uracil-DNA glycosylase, family 4 [Streptomyces sp. SPB74]
 gi|295827517|gb|EFG65442.1| uracil-DNA glycosylase, family 4 [Streptomyces sp. SPB74]
          Length = 247

 Score = 55.5 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 58/206 (28%), Gaps = 46/206 (22%)

Query: 73  KACSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLMIIG 114
            + +LH L + + S   C                           +     +   L+++G
Sbjct: 9   ASGALHALDTRIASCRACPRLVAWREEAARVKRAAFADEEYWARPVPGFGPQDARLLVLG 68

Query: 115 YTPSDS-DNISGKPFSG-KTGNMLDKMLQ-------------SIEIMRTQIHISMISPWH 159
             P+    N +G+ F+G ++G++L                     +      ++      
Sbjct: 69  LAPAAHGGNRTGRMFTGDRSGDVLFHAFHGVGLANLAQPLAPGDGLRLLGTRVTAPVHCA 128

Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFF--------NNDAQKT 209
           PP N   +  E + CR  +  ++ L+ P  + ++ +G                     + 
Sbjct: 129 PPQN-KPTPRERDTCRHWLAEELALLRPTVRAVVILGAFGWQAALPAFAEAAWTVPRPRP 187

Query: 210 YQNLGKWSNLCTPHSIIP--TLATVH 233
               G    L       P       H
Sbjct: 188 RFGHGAVVRLAAHDGGPPLDVFGCYH 213


>gi|333027905|ref|ZP_08455969.1| putative uracil-DNA glycosylase, family 4 [Streptomyces sp. Tu6071]
 gi|332747757|gb|EGJ78198.1| putative uracil-DNA glycosylase, family 4 [Streptomyces sp. Tu6071]
          Length = 248

 Score = 55.5 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 55/206 (26%), Gaps = 46/206 (22%)

Query: 73  KACSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLMIIG 114
               LH L + +     C                           +     E   L+++G
Sbjct: 12  ADRKLHALDAEVTRCRACPRLVAWREEVGRVKRAAFADEEYWARPVPGFGPEDARLLVLG 71

Query: 115 YTPSDS-DNISGKPFSGKT-GNMLDKML-------------QSIEIMRTQIHISMISPWH 159
             P+    N +G+ F+G   G++L + L                 +      ++      
Sbjct: 72  LAPAAHGGNRTGRMFTGDRAGDVLFRALYDIGLASAPLPRAADDGLRLHGTRLTSPVHCA 131

Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNN--------DAQKT 209
           PP     +  E + CR  ++ ++ L+ P  + ++ +G                     + 
Sbjct: 132 PP-ANKPTPQERDTCRHWLVEELTLLRPTVRAVVVLGAFGWQAALPAFAAAGWEVPRPRP 190

Query: 210 YQNLGKWSNLCTPHSIIP--TLATVH 233
               G    L       P       H
Sbjct: 191 AFGHGARVRLPARDGGAPLDVFGCYH 216


>gi|311746466|ref|ZP_07720251.1| NLP/P60 family protein [Algoriphagus sp. PR1]
 gi|126575361|gb|EAZ79693.1| NLP/P60 family protein [Algoriphagus sp. PR1]
          Length = 194

 Score = 55.1 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 49/163 (30%), Gaps = 13/163 (7%)

Query: 80  LKSLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDK 138
           L S  R+   C          +         ++++G  P      +G P++  +G  L +
Sbjct: 7   LSSQARACLICAGKIPFEPKPVF-RIHPKSKILVVGQAPGTKVQNTGIPWNDPSGEELRR 65

Query: 139 ML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFI 193
            L   +          I  +   +P    +        C P    Q     P  K++L I
Sbjct: 66  WLDVGREEFYNEEIFGILPMGFCYPGKGNSGDLPPRPECAPTWHPQFLKELPDLKLILLI 125

Query: 194 GNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
           G   + ++          + +  + +    +        VHP 
Sbjct: 126 GQYAQRYYLNGERKSNLTETVKAFKDYLPQY-----FPLVHPS 163


>gi|86147875|ref|ZP_01066180.1| hypothetical protein MED222_00602 [Vibrio sp. MED222]
 gi|85834302|gb|EAQ52455.1| hypothetical protein MED222_00602 [Vibrio sp. MED222]
          Length = 197

 Score = 55.1 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 65/178 (36%), Gaps = 18/178 (10%)

Query: 80  LKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
           L + +R    C   L   +   I A       L+IIG  P    + S  P++  +G  L 
Sbjct: 5   LLTEIRQCTACEPHLSHGANPVIQA--HPNARLLIIGQAPGIKVHESSIPWNDASGERLR 62

Query: 138 KMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLF 192
           + L+          ++ I  +   +P   ++      + C  +  +++    P  ++ L 
Sbjct: 63  EWLEMDSDTFYDEQKVAIVPMGFCYPGKGKSGDLPPRKECAALWHKKVLQSLPNIQMTLL 122

Query: 193 IGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248
           IG   +N++    A  T  + +  W         +P     HP    +  +  KKN W
Sbjct: 123 IGQYAQNYYLKEKATSTLTETVRNWQAWAPEFLPLP-----HPSP--RNNIWLKKNPW 173


>gi|318056332|ref|ZP_07975055.1| hypothetical protein SSA3_00200 [Streptomyces sp. SA3_actG]
 gi|318079983|ref|ZP_07987315.1| hypothetical protein SSA3_25683 [Streptomyces sp. SA3_actF]
          Length = 248

 Score = 55.1 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 55/202 (27%), Gaps = 46/202 (22%)

Query: 77  LHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLMIIGYTPS 118
           LH L + +     C                           +     E   L+++G  P+
Sbjct: 16  LHALDAEVTRCRACPRLVAWREEVGRVKRAAFADEEYWARPVPGFGPEDARLLVLGLAPA 75

Query: 119 DS-DNISGKPFSGKT-GNMLDKML-------------QSIEIMRTQIHISMISPWHPPGN 163
               N +G+ F+G   G++L + L                 +      ++      PP  
Sbjct: 76  AHGGNRTGRMFTGDRAGDVLFRALYDIGLASAPLPRAADDGLRLHGTRLTSPVHCAPP-A 134

Query: 164 RNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNN--------DAQKTYQNL 213
              +  E + CR  ++ ++ L+ P  + ++ +G                     +     
Sbjct: 135 NKPTPQERDTCRHWLVEELTLLRPTVRAVVVLGAFGWQAALPAFAAAGWEVPRPRPAFGH 194

Query: 214 GKWSNLCTPHSIIP--TLATVH 233
           G    L       P       H
Sbjct: 195 GARVRLPARDGGAPLDVFGCYH 216


>gi|148259543|ref|YP_001233670.1| uracil-DNA glycosylase superfamily protein [Acidiphilium cryptum
           JF-5]
 gi|326402749|ref|YP_004282830.1| uracil-DNA glycosylase [Acidiphilium multivorum AIU301]
 gi|146401224|gb|ABQ29751.1| Uracil-DNA glycosylase superfamily [Acidiphilium cryptum JF-5]
 gi|325049610|dbj|BAJ79948.1| uracil-DNA glycosylase [Acidiphilium multivorum AIU301]
          Length = 211

 Score = 55.1 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 46/180 (25%), Gaps = 30/180 (16%)

Query: 88  HDCHLC------STSLS---------TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131
            DC LC        +            +     E   L+++G  P     N +G+PF+G 
Sbjct: 7   RDCALCPRLSGFRAANHAKFPGWFNAPVPCFGPENARLLVVGLAPGLRGANRTGRPFTGD 66

Query: 132 T-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177
             G++L   L    +                   I       PP NR L          +
Sbjct: 67  FAGHLLYATLIKYGLAIGVYAERPDDGLELRDCRIINAVRCVPPENRPLPAEIAACNGFL 126

Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237
                 +   + +L +G             K          +      I    + H   L
Sbjct: 127 ARDIAAMTQLRGILALGGIAHQATLRAFGLKQSHAKFSHGAMTELPGGIVLADSFHVSRL 186


>gi|192291343|ref|YP_001991948.1| uracil-DNA glycosylase superfamily [Rhodopseudomonas palustris
           TIE-1]
 gi|192285092|gb|ACF01473.1| Uracil-DNA glycosylase superfamily [Rhodopseudomonas palustris
           TIE-1]
          Length = 224

 Score = 55.1 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 50/179 (27%), Gaps = 37/179 (20%)

Query: 88  HDCHLC--------STSLS-------TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131
            DC LC                     + +       L+I+G  P     N +G+PF+G 
Sbjct: 21  RDCPLCPRLAEFRSEARAREPGWFNAPVPSFGGADASLLIVGLAPGLQGANRTGRPFTGD 80

Query: 132 T-GNMLDKMLQSIEIMRTQ-------------IHISMISPWHPPGNRNLSNIEMEICRPI 177
             G++L   L      R                 IS      PP N+ L        R +
Sbjct: 81  YAGDLLYATLIDYGFARGHYQARPDDGLQLTDCRISNAVRCVPPQNKPLPIEINTCRRFL 140

Query: 178 IMRQIELISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
           I     +   + ++ +G    +         A +     G   +       +    + H
Sbjct: 141 IATIEAMPKLRAIVLLGRIAHDSTLKALGLRAAQAPFGHGAVHDA----GRLRLYDSYH 195


>gi|315500449|ref|YP_004089252.1| uracil-DNA glycosylase superfamily [Asticcacaulis excentricus CB
           48]
 gi|315418461|gb|ADU15101.1| Uracil-DNA glycosylase superfamily [Asticcacaulis excentricus CB
           48]
          Length = 192

 Score = 55.1 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 59/197 (29%), Gaps = 32/197 (16%)

Query: 84  LRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ- 141
           + +   C          +  T      ++IIG  P    ++SG P+   +G  L   +Q 
Sbjct: 7   IAACRVCEAHLPLGPRPVLRTADPAARVLIIGQAPGTKVHVSGIPWDDASGQRLRDWMQV 66

Query: 142 --SIEIMRTQIHISMISPWHP-------PGNRNLSNIEMEICRPIIMRQIELISPKILLF 192
                  +++  I  +   +P        G  +               +  L + ++ L 
Sbjct: 67  TPDAFYDQSRFAILPMGLCYPGRAVTSKGGGGDNPPRPECAPLWHARVRKTLPNIQLTLL 126

Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNT 247
           IG   + ++ N+    T +                    VHP       L + P      
Sbjct: 127 IGAYAQGYYLNDCLSLTERVR-------QADQYGAFFPLVHPSPRNRLWLSRNP------ 173

Query: 248 WHA---LITLKKALKNL 261
           W     L  L+  L+ L
Sbjct: 174 WFDAEILSRLRARLRGL 190


>gi|83854714|ref|ZP_00948244.1| uracil-DNA glycosylase, putative [Sulfitobacter sp. NAS-14.1]
 gi|83842557|gb|EAP81724.1| uracil-DNA glycosylase, putative [Sulfitobacter sp. NAS-14.1]
          Length = 231

 Score = 55.1 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 27/225 (12%), Positives = 67/225 (29%), Gaps = 29/225 (12%)

Query: 56  IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL------STICATQTEGQD 109
           ++H       +  +   ++ ++ +++  L     C     +       + +      G  
Sbjct: 16  VKHHRVTAPFETGAPPLRSTTMTDIRPELSQCTLCSDRFAATATGHRPNPVVWF-QPGAR 74

Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNL 166
           L+I    P    + +  PF   +G  L   L   ++    R+++ I  ++   P  +   
Sbjct: 75  LLIASQAPGLKVHEANTPFWDASGKRLRDWLGVDETTFYDRSRVAIIPMAFCFPGYDAKG 134

Query: 167 ---SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH 223
                  +            +   ++ + IG     +          + +  W N     
Sbjct: 135 SDLPPPPICAKTWRAGALDTVPDIRLTVLIGAYAMRYHL-PGFTTVTRAVADWQNHPKG- 192

Query: 224 SIIPTLATVHPQELIQYPLI-KKNTW--HALI-----TLKKALKN 260
                 A  HP    +     KKN W    ++      ++  L +
Sbjct: 193 ----VFALPHPSW--RNTGWLKKNPWFEEDVLPRLRAAVRNVLDD 231


>gi|262273293|ref|ZP_06051108.1| uracil-DNA glycosylase [Grimontia hollisae CIP 101886]
 gi|262222666|gb|EEY73976.1| uracil-DNA glycosylase [Grimontia hollisae CIP 101886]
          Length = 194

 Score = 55.1 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 69/199 (34%), Gaps = 22/199 (11%)

Query: 75  CSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
             L  L   +R  + C  HL       + A       L+IIG  P    + +G P++  +
Sbjct: 4   KPLALLLDRVRDCNHCRAHLPLGPRPVVQA--APSARLLIIGQAPGTRVHKTGIPWNDPS 61

Query: 133 GNMLDKMLQSIE---IMRTQIHISMISPWH----PPGNRNLSNIEMEICRPIIMRQIELI 185
           G+ L + LQ  +       Q+ I  +   +      G+         +  P+I  Q+  I
Sbjct: 62  GDRLREWLQMEKETFYNPEQVAIMPMGFCYPGRGHSGDLPPRPECAPMWHPLITAQLPDI 121

Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKK 245
                L IG+  + ++  +  +   + +               +A  HP        ++K
Sbjct: 122 QL--TLLIGDYAQRYYLKDKPKTLTETVKANVCWSPEF-----IALPHPSP-RNNLWLRK 173

Query: 246 NTWHA---LITLKKALKNL 261
           N W     L  L+  +  L
Sbjct: 174 NPWFDAEILPMLRNRIDQL 192


>gi|209884967|ref|YP_002288824.1| uracil-DNA glycosylase superfamily [Oligotropha carboxidovorans
           OM5]
 gi|209873163|gb|ACI92959.1| uracil-DNA glycosylase superfamily [Oligotropha carboxidovorans
           OM5]
          Length = 243

 Score = 55.1 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 53/198 (26%), Gaps = 31/198 (15%)

Query: 66  QADSIAQKACSLHELKSLLRSFHDCHLC--------STS-------LSTICATQTEGQDL 110
                A +  S   L       HDC LC        +            +         +
Sbjct: 18  AGRRTASRRASSPSLSDTSHPGHDCPLCPRLVEFREANRAAHPDWFNGPVPPLGGRDAAV 77

Query: 111 MIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEI-------------MRTQIHISMI 155
           +I+G  P     N +G+PF+G   G++L   L                        I   
Sbjct: 78  LIVGLAPGLQGANRTGRPFTGDYAGDLLYATLLEFGFASGRYEARPDDTLKLVDCRIGNA 137

Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK 215
               PP N+          + ++    ++   K ++ +G  + +               K
Sbjct: 138 VHCVPPQNKPTPAEINTCRQFLVSTIKDMPRLKAIVTLGRISHDSTLKALGLPLRAAPFK 197

Query: 216 WSNLCTPHSIIPTLATVH 233
                  H  +   ++ H
Sbjct: 198 -HGGEFQHGALRVFSSYH 214


>gi|159043141|ref|YP_001531935.1| uracil-DNA glycosylase superfamily [Dinoroseobacter shibae DFL 12]
 gi|157910901|gb|ABV92334.1| uracil-DNA glycosylase superfamily [Dinoroseobacter shibae DFL 12]
          Length = 202

 Score = 55.1 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 58/201 (28%), Gaps = 27/201 (13%)

Query: 79  ELKSLLRSFHDCHLC------STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
            L   L +   C         +     +         ++I    P    + + +PF+  +
Sbjct: 5   ALAKDLAACTLCASRFATTASAHRPRPVVWF-RPTARVLIASQAPGMRAHKAARPFTDPS 63

Query: 133 GNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSN-IEMEICRPIIMRQIELISPK 188
           G  L   L   +     +    I  +    P  +   S+     IC       I    P+
Sbjct: 64  GVRLRAWLGVNEDTFYDKNLFAIVPMGFCFPGYDAKGSDLPPPRICAQTWRAPILAGLPQ 123

Query: 189 I--LLFIGNKTKNFFFNNDAQK-TYQNLGKWSNLCTPHSIIPTLATVHP-----QELIQY 240
           I   L IG   + +    +A+    + + +W +              HP       L + 
Sbjct: 124 IALTLLIGGYAQKWHLGPEARAGVTETVRRWRDYAPD-----VFPLPHPSWRNTAWLNRN 178

Query: 241 PLIKKNTWHALITLKKALKNL 261
           P  +      L  L+  L  +
Sbjct: 179 PWFEAEC---LPALRARLGEV 196


>gi|153009686|ref|YP_001370901.1| hypothetical protein Oant_2358 [Ochrobactrum anthropi ATCC 49188]
 gi|151561574|gb|ABS15072.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188]
          Length = 210

 Score = 55.1 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 59/193 (30%), Gaps = 21/193 (10%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII---------GYTPSDSDNISGKP 127
           + +L  L  S   C +C  +         E   + I+         G  P    + +  P
Sbjct: 1   MEKLDELSHSIRACRICRDTPQFPPPLPHEPNPVCIVSDTARIAICGQAPGIRVHNTSLP 60

Query: 128 FSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRN--LSNIEMEICRPIIMRQI 182
           F+  +G+ L + L   +      ++  I  +    P  +++        E  +    R  
Sbjct: 61  FNDPSGDRLRQWLGVSREEFYDPSRFAIVPMGFCFPGYDKHGGDLPPRRECRQTWHDRVF 120

Query: 183 -ELISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNL--CTPHSIIPTLATVHPQELI 238
             +   + +L +G     +   +   +   + +  W         +    L   HP    
Sbjct: 121 AAMPQLEFILVVGQYALAYHLPDYRGRNLTETVRNWRYFLETPNPAGRIALPLPHPSW-- 178

Query: 239 QYPLI-KKNTWHA 250
           +     K+N W  
Sbjct: 179 RNSGWLKRNPWFD 191


>gi|332533031|ref|ZP_08408901.1| putative uracil-DNA glycosylase family protein [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332037510|gb|EGI73963.1| putative uracil-DNA glycosylase family protein [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 193

 Score = 55.1 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 61/179 (34%), Gaps = 18/179 (10%)

Query: 79  ELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           +L   +     C   L   +   I         ++I G  P    + +G PF+  +GN L
Sbjct: 5   QLIEQVSKCVICEPHLPLGARPVI--QFNPNARILIAGQAPGIKVHETGVPFNDASGNRL 62

Query: 137 DKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILL 191
            + L   +        I I  +   +P   ++      + C P    Q+    P  ++ +
Sbjct: 63  REWLGLTRDEFYDANNIAILPMGFCYPGRGKSGDLPPRKECAPAWREQLLAALPNIELTI 122

Query: 192 FIGNKTKNFFFNNDAQKTYQNLGK-WSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248
            +G   + +      +     L K W      + ++P     HP    +  +  KKN W
Sbjct: 123 VLGKYAQAYHLPETKKMPLTELVKSWREYWPNYLVLP-----HPSP--RNNIWLKKNPW 174


>gi|240850667|ref|YP_002972067.1| putative uracil-DNA glycosylase protein [Bartonella grahamii
           as4aup]
 gi|240267790|gb|ACS51378.1| putative uracil-DNA glycosylase protein [Bartonella grahamii
           as4aup]
          Length = 209

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 59/189 (31%), Gaps = 21/189 (11%)

Query: 72  QKACSLHELKSLLRSFHDC--------HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123
           ++   + +L+  + S   C         L     + +         + I G  P    + 
Sbjct: 2   KRCNQIIKLEKKIYSCRVCIQQPHYFPPL-PHEPNPVVYLSDT-ASIAIAGQAPGLRVHE 59

Query: 124 SGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180
           +  PF+ ++G  L   L   +     ++   I  +    P  + N +++        I  
Sbjct: 60  TSIPFNDRSGKRLRDWLGVTKEEFYNKSLFAIVPMGFCFPGYDNNKADLPPRRECREIWH 119

Query: 181 Q---IELISPKILLFIGNKTKNFFFNN-DAQKTYQNLGKWSNL--CTPHSIIPTLATVHP 234
           +     +   K++L IG+  + +       +     +  W N+   +       +   HP
Sbjct: 120 EKIFQAMPQIKLVLAIGSYAQKWHITELKHKTVSATVSDWRNILSISQPQGYNVMPLPHP 179

Query: 235 QELIQYPLI 243
               +    
Sbjct: 180 SW--RNTSW 186


>gi|83748542|ref|ZP_00945562.1| Uracil DNA glycosylase superfamily protein [Ralstonia solanacearum
           UW551]
 gi|207743322|ref|YP_002259714.1| uracil-dna glycosylase protein [Ralstonia solanacearum IPO1609]
 gi|83724750|gb|EAP71908.1| Uracil DNA glycosylase superfamily protein [Ralstonia solanacearum
           UW551]
 gi|206594719|emb|CAQ61646.1| uracil-dna glycosylase protein [Ralstonia solanacearum IPO1609]
          Length = 206

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 54/178 (30%), Gaps = 16/178 (8%)

Query: 84  LRSFHDCHLCSTS-----LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDK 138
           L     C LC+ +        + A       ++I+G  P    + +G P++ ++G+ L +
Sbjct: 17  LHDVRACRLCAGALPQEPRPIVMAD--RRARVLIVGQAPGRIVHETGIPWNDRSGDRLRQ 74

Query: 139 MLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFI 193
            LQ          +I +  +    P    +        C P   R +    P  K+ L +
Sbjct: 75  WLQIGYDDFYADKRIAVVPMGFCFPGTGPSGDLPPRPECAPQWHRPLLTAMPELKLALLV 134

Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTWHA 250
           G   + ++ +                             HP    +     K N W  
Sbjct: 135 GGYAQRYYLDV-PPGWSLTDVVRHGPVRDAEGRVLFPLPHPSP--RNLAWFKHNPWFD 189


>gi|117621213|ref|YP_858181.1| uracil-DNA glycosylase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|117562620|gb|ABK39568.1| uracil-DNA glycosylase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 193

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 63/181 (34%), Gaps = 14/181 (7%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
             L  L   +R+   C              +E   L+IIG  P    + SG P+   +G+
Sbjct: 2   NRLDSLFEQIRACRLCEAHLPLGPRPVIRGSERARLLIIGQAPGTRVHASGIPWDDPSGD 61

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNR--NLSNIEMEICRPIIMRQIELISPKI 189
            L + L   ++     ++I I  +   +P   +  +L               + L + ++
Sbjct: 62  RLRQWLGVDKATFYDESRIAIMPMGLCYPGKGKSGDLPPRPECAPTWHDKVLMLLPNIEL 121

Query: 190 LLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247
            L IG   + ++  +       + +  W++       +P     HP    +     KKN 
Sbjct: 122 TLLIGQYAQAYYLRDAAKGSLTETVRSWADYGPAWLPLP-----HPSP--RNTFWLKKNL 174

Query: 248 W 248
           W
Sbjct: 175 W 175


>gi|291529488|emb|CBK95074.1| Uracil-DNA glycosylase [Eubacterium rectale M104/1]
          Length = 185

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 57/165 (34%), Gaps = 9/165 (5%)

Query: 82  SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT--GNMLDKM 139
             +   + C  C      I        D+MIIG +          P   +T  G ++D  
Sbjct: 3   RKMIECNKCQECLNQK--ILLDFQNNADIMIIGLSARIKKYEDEIPLDSRTRSGKIIDAF 60

Query: 140 LQSIEIMRTQIHISMISPWHPPGNRN----LSNIEMEICRPIIMRQIELISPKILLFIGN 195
               +     ++ + +    P  +       ++ E+  C   +  +I  I+PK+++ +GN
Sbjct: 61  ENIAQKHCMSVYRTNLVKCAPIDSEKRLRYPNDKEINACFEKLTDEINNIAPKLIILLGN 120

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
             +  F  N      +       +    + I  ++  HP  + + 
Sbjct: 121 IVRESFQTNFNINICKPKENSLQVV-KWNNINIISIYHPSYIKRS 164


>gi|315124458|ref|YP_004066462.1| hypothetical protein ICDCCJ07001_928 [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|315018180|gb|ADT66273.1| hypothetical protein ICDCCJ07001_928 [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
          Length = 150

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 55/153 (35%), Gaps = 10/153 (6%)

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML-QSIEIMRTQIHISMISPWHPPGNRN 165
              L+I+      S+N SG   + K G  L + + Q + +     + S +      G  +
Sbjct: 7   NAKLLILDVFGQKSENESGILLNSKKGEKLKRYIYQILGLCDEDFYFSYLFKCFCNGKFD 66

Query: 166 LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI 225
             +  ++ C P    +++LI P  LL +G  T         +  +   G+          
Sbjct: 67  DFS--LQSCLPFFWNELKLIQPAFLLCLGEYTFKSL---GFKDYHILKGEVFAY----KN 117

Query: 226 IPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
              + +     + + P  +KN    L  +K  L
Sbjct: 118 FFIMPSYDLDFIEKNPSYEKNFIQDLKKIKGFL 150


>gi|229521016|ref|ZP_04410437.1| uracil-DNA glycosylase [Vibrio cholerae TM 11079-80]
 gi|229341901|gb|EEO06902.1| uracil-DNA glycosylase [Vibrio cholerae TM 11079-80]
          Length = 180

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 58/166 (34%), Gaps = 14/166 (8%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L  L + +R    C   L   + + +         ++IIG  P    + +  P +  +G 
Sbjct: 2   LESLLTEIRQCTVCEPHLPLGA-NPVI-RAHPAAKILIIGQAPGTKVHQTSIPRNDASGE 59

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189
            L + L   +        I I  +   +P   R+      + C P+   ++    P  ++
Sbjct: 60  RLRQWLGLDREAFYCEENIAIMPMGLCYPGKGRSGDLPPRKECAPLWHAKVLEQLPNRQL 119

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
            L IG   ++++ ++      + + +W            L   HP 
Sbjct: 120 TLLIGQYAQHYYLSDKPSTLTETVQQWQRWAPS-----VLPLPHPS 160


>gi|217977185|ref|YP_002361332.1| Uracil-DNA glycosylase superfamily [Methylocella silvestris BL2]
 gi|217502561|gb|ACK49970.1| Uracil-DNA glycosylase superfamily [Methylocella silvestris BL2]
          Length = 228

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 56/202 (27%), Gaps = 25/202 (12%)

Query: 52  PITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLM 111
            +       +  V +          L  L+  LR        S +   +         ++
Sbjct: 2   ALDRSAAAVALRVLEPPIDCPLCPRLAALRRSLREEQ--PGWSNA--PVPTFGDPSAPVL 57

Query: 112 IIGYTPSDSD-NISGKPFSGKT-GNMLDKML-------------QSIEIMRTQIHISMIS 156
           I+G  P     N +G+PF+G   G++L   L             +   +      IS   
Sbjct: 58  IVGLAPGLRGANRTGRPFTGDYAGDLLYSTLLAYGFATGVYGASRDDGLRLRDCAISNAV 117

Query: 157 PWHPPGNRNLSNIEMEICRPIIMRQIELI-SPKILLFIGNKTKNFF---FNNDAQKTYQN 212
              PP N   +  E+  CR  +   +E      +++ +G                     
Sbjct: 118 RCVPPQN-KPTPEEIATCRSFLKATLERSAHLSVVVALGRIAHESILRALGAKLSAFPFA 176

Query: 213 LGKWSNLC-TPHSIIPTLATVH 233
            G    L       +    + H
Sbjct: 177 HGAEHKLPRANGRDLALFDSYH 198


>gi|239787552|emb|CAX84021.1| Uracil-DNA glycosylase superfamily [uncultured bacterium]
          Length = 218

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 49/178 (27%), Gaps = 25/178 (14%)

Query: 74  ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT 132
              L   +   R          +   + +  +    L+I+G  P     N +G+PF+G  
Sbjct: 16  CPRLAAFRDAARVS--FPGWHNA--PVPSFGSLDARLLIVGLAPGLRGANRTGRPFTGDF 71

Query: 133 -GNMLDKMLQSIEIMRT-------------QIHISMISPWHPPGNRNLSNIEMEICRPII 178
            G++L   L    + R                 I+      PP N+            + 
Sbjct: 72  AGDLLYATLLRFGLARGSYGASPEDGLELLDCRITNAVRCVPPENKPTGPEVTACRPFLA 131

Query: 179 MRQIELISPKILLFIGNKTKNFF---FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
              + +   K++L +G  +                   G    L      +    + H
Sbjct: 132 GEILAMGKLKVVLALGALSHGAVLAALGEKKSAHAFAHGARHVL---GRGLILADSYH 186


>gi|326319269|ref|YP_004236941.1| Uracil-DNA glycosylase superfamily [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323376105|gb|ADX48374.1| Uracil-DNA glycosylase superfamily [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 267

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 40/130 (30%), Gaps = 13/130 (10%)

Query: 110 LMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI 169
            +++G + S        P SG  G +LD ML+++ + R              G       
Sbjct: 122 WLVVGESLSPDA-----PLSGDAGKLLDNMLRAMRLHRHPRTHFSAVERADAGTAEGPG- 175

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
                   +   I  + P ++L +G         +      +       L       P +
Sbjct: 176 ---NAAGSLQAAIATLRPAMVLVLGLPAARAVLGSREPL-GRLRATTHQLP---DGTPAV 228

Query: 230 ATVHPQELIQ 239
            T  P  L++
Sbjct: 229 VTYDPAYLLR 238


>gi|94313480|ref|YP_586689.1| uracil-DNA glycosylase superfamily [Cupriavidus metallidurans CH34]
 gi|93357332|gb|ABF11420.1| uracil-DNA glycosylase superfamily [Cupriavidus metallidurans CH34]
          Length = 201

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 63/178 (35%), Gaps = 14/178 (7%)

Query: 67  ADSIAQKACSL-HELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123
           A    Q+A ++   L+  + S   C   L +     +    +    ++IIG  P    + 
Sbjct: 2   ATKSPQRAQAIVTSLRRDIASCTRCAADLPAGPRPVV--QFSATSRILIIGQAPGSRVHA 59

Query: 124 SGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180
           SG PF   +G+ L +       +    +++ I  +   +P    +        C P+   
Sbjct: 60  SGIPFDDPSGDRLREWTGLSHDVFYDASRVAIMPMGFCYPGKGPSGDLPPRRECAPLWHD 119

Query: 181 QIELISP--KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236
            I  + P  ++ L +G+  + ++   +   T   + +      P+         HP  
Sbjct: 120 AILRLLPEDRLTLLVGSYAQAYYLQGEVGATMTEIVRDFRRFGPN----LFPLPHPSW 173


>gi|297379850|gb|ADI34737.1| Hypothetical protein HPV225_0658 [Helicobacter pylori v225d]
          Length = 209

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 60/184 (32%), Gaps = 13/184 (7%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            ++   + + + C     S   +         L  I  TP    +      +     ML+
Sbjct: 37  KQVYEGIENCNLCKRHQNSK-PVIGLFNPTSKLTFITLTP--MLDSQLNFLNNLKAAMLE 93

Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++Q           I  +       N      E+  C   +  Q++  + K+++  G  
Sbjct: 94  SIIQKVFNCPLKDCSILSLLKC--DSNSLNLEEEINACLFHLTWQLDNSASKVIVVFGEI 151

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                 N       ++ G+  +L T H     L+T   +++++ P +KK       T  +
Sbjct: 152 LPQRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFKTALQ 204

Query: 257 ALKN 260
            L  
Sbjct: 205 FLNQ 208


>gi|300691683|ref|YP_003752678.1| uracil-dna glycosylase protein [Ralstonia solanacearum PSI07]
 gi|299078743|emb|CBJ51403.1| uracil-dna glycosylase protein [Ralstonia solanacearum PSI07]
          Length = 206

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 57/175 (32%), Gaps = 13/175 (7%)

Query: 84  LRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
           +R+   C   L       + A       ++I+G  P    + +G P++ ++G+ L + L+
Sbjct: 20  VRACRLCTGVLPQAPRPIVMAD--RRARVLIVGQAPGRIVHETGIPWNDRSGDRLRQWLR 77

Query: 142 ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNK 196
                     +I +  +    P    N        C P   R +    P  K+ L +G  
Sbjct: 78  IGYDDFYADKRIAVVPMGFCFPGTGPNGDLPPRPECAPQWHRPLLTAMPDLKLALLVGGY 137

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTWHA 250
            + ++ +     +  ++ +                 HP    +     K N W  
Sbjct: 138 AQRYYLDVPRGGSLTDVVR-HGPVQDAEGRVLFPLPHPSP--RNLAWFKHNPWFD 189


>gi|121595680|ref|YP_987576.1| uracil-DNA glycosylase superfamily protein [Acidovorax sp. JS42]
 gi|120607760|gb|ABM43500.1| Uracil-DNA glycosylase superfamily [Acidovorax sp. JS42]
          Length = 221

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 61/208 (29%), Gaps = 13/208 (6%)

Query: 48  SAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC-HLCSTSLSTICATQTE 106
            A  P   +     P         ++   L EL   +R+   C          +      
Sbjct: 1   MAKPPRNELPGHALPRNGLPRDDTRRDEPLDELLRRVRACTICAPYLPLGPRPVL-QADA 59

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGN 163
              L+I+G  P    + SG PF   +G  L   L   +       ++ I  +   +P   
Sbjct: 60  RARLLIVGQAPGRKVHASGIPFDDASGERLRTWLGLTRETFYDPARVAIVPMGFCYPGRG 119

Query: 164 RNLSNIEMEICRPIIMRQIELISPKI--LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221
            +        C P     +    P I   + +G     +          Q LG+      
Sbjct: 120 ASGDAPPRPECAPAWRVPLLARLPNIALTVAVGQYALAWHLA---ACRGQPLGETVRGTC 176

Query: 222 PHSIIPTLATVHPQELIQYPLI-KKNTW 248
             S  P LA  HP    +     K++ W
Sbjct: 177 TLSDAPVLALPHPSP--RNNGWLKRHPW 202


>gi|240138076|ref|YP_002962548.1| hypothetical protein MexAM1_META1p1409 [Methylobacterium extorquens
           AM1]
 gi|240008045|gb|ACS39271.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
          Length = 212

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 51/181 (28%), Gaps = 16/181 (8%)

Query: 70  IAQKACSLHELKSLLRSFHDC--------HLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121
           ++    +     + LR+   C         L       +    +    L+I    P +  
Sbjct: 1   MSAAPENFEATAARLRACRLCRDAPLYGAPLPHEPRPVV--QGSATARLLIASQAPGNRA 58

Query: 122 NISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHP---PGNRNLSNIEMEICR 175
           + SG PFS  +G  L   L   ++      ++ I  +    P       +          
Sbjct: 59  HRSGIPFSDPSGRRLRDWLGLDEAAFYDPRRVAILPMGACFPGLDAKGGDRPPRRECAPT 118

Query: 176 PIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
                   L    ++L IG   + +          + + +W  +    +    L   HP 
Sbjct: 119 WRADLLAGLPQLDLILVIGQYAQAWHLGPRPGGLTETVARWRTILDASARPRVLPLPHPS 178

Query: 236 E 236
            
Sbjct: 179 W 179


>gi|260770641|ref|ZP_05879572.1| uracil-DNA glycosylase [Vibrio furnissii CIP 102972]
 gi|260614367|gb|EEX39555.1| uracil-DNA glycosylase [Vibrio furnissii CIP 102972]
          Length = 190

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 65/179 (36%), Gaps = 18/179 (10%)

Query: 80  LKSLLRSFHDCHLCSTS----LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           L  LLR    C +C  +     + +     E   ++IIG  P    + S  P++  +G+ 
Sbjct: 2   LHDLLRDIRQCRVCEPALPLGANPVI-QAHEAARILIIGQAPGIRVHQSSVPWNDPSGDR 60

Query: 136 LDKMLQ---SIEIMRTQIHISMISPWHPPGNR--NLSNIEMEICRPIIMRQIELISPKIL 190
           L + L           QI I  +   +P   +  +L                +L + ++ 
Sbjct: 61  LRRWLDIDKETFYDPKQIAIMPMGLCYPGKGKSGDLPPRRECAPLWHQSVLAQLPNIQMT 120

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248
           L IG   +N++  +      + + +W      +  +P     HP    +  L  KKN W
Sbjct: 121 LLIGQYAQNYYLKDKPATLTETVRQWQRWAPHYLPLP-----HPSP--RNTLWLKKNPW 172


>gi|163793036|ref|ZP_02187012.1| Uracil-DNA glycosylase superfamily protein [alpha proteobacterium
           BAL199]
 gi|159181682|gb|EDP66194.1| Uracil-DNA glycosylase superfamily protein [alpha proteobacterium
           BAL199]
          Length = 196

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 48/150 (32%), Gaps = 15/150 (10%)

Query: 99  TICATQTEGQDLMIIGYTPS-DSDNISGKPFSGKT-GNMLDKMLQSIEIMR--------- 147
            + +  T    L+I+G  P     N +G+PF+G   G++L   L      R         
Sbjct: 18  PVPSFGTADARLLIVGMAPGLKGANRTGRPFTGDFAGDLLYATLIRHGFARGTYDRRSDD 77

Query: 148 ----TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
               T   I+      PP N+ +          +     E+ + +++L +G+        
Sbjct: 78  GLALTDCRITNAVRCVPPQNKPVGAEVNACRPFLTATMAEMPALQVILVLGSLAHGATLA 137

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
               K   +                +++ H
Sbjct: 138 ALGLKKSAHKFGHGAKAVLPDGRALISSYH 167


>gi|332185463|ref|ZP_08387211.1| uracil DNA glycosylase superfamily protein [Sphingomonas sp. S17]
 gi|332014441|gb|EGI56498.1| uracil DNA glycosylase superfamily protein [Sphingomonas sp. S17]
          Length = 223

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/208 (12%), Positives = 59/208 (28%), Gaps = 30/208 (14%)

Query: 42  KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTIC 101
            + S  +   P+  I+      +            L E++  + +  +      +   + 
Sbjct: 2   PDASFPAIPAPLAPIQPPRDCPL---------CPRLVEVRHAVAA--EYPTWWNA--PVY 48

Query: 102 ATQTEGQDLMIIGYTPSDSDNI-SGKPFSGK-TGNMLDKMLQSIEIMRTQIH-------- 151
                   L ++G  P       +G+PF+G   G +L   L    +   Q          
Sbjct: 49  PFGDGEAWLAVVGLAPGKHGAHRTGRPFTGDGAGPLLYGTLAKFGLAEGQFDARIDDGLT 108

Query: 152 -----ISMISPWHPPGNRNLSNIEMEICRPIIMRQIEL-ISPKILLFIGNKTKNFFFNND 205
                I       PP N   +  E+  CR  + +++      K+++ +G           
Sbjct: 109 LTGAVILNAVKCLPPEN-KPTPDEIRTCRSFLEQELAALPRLKVVVALGQIAHQSVVKAL 167

Query: 206 AQKTYQNLGKWSNLCTPHSIIPTLATVH 233
             +  +                 L + H
Sbjct: 168 GGRLPKARFAHLAEHRMPGGPVVLDSYH 195


>gi|261838110|gb|ACX97876.1| hypothetical protein KHP_0671 [Helicobacter pylori 51]
 gi|261839523|gb|ACX99288.1| hypothetical protein HPKB_0694 [Helicobacter pylori 52]
          Length = 209

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 59/184 (32%), Gaps = 13/184 (7%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            ++   + + + C     S   +         L  I  TP    +      +     ML+
Sbjct: 37  KQVYEGIENCNLCKRHQNSK-PVIGLFNPTSKLTFITLTP--MLDSQLNFLNNLKAAMLE 93

Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++Q           I  +       N      E+  C   +  Q++  + K+++  G  
Sbjct: 94  SIIQKVFNCPLKDCSILSLLKC--DSNSLNLEEEINACLFHLTWQLDNSASKVIVVFGEI 151

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                 N       ++ G+  +L T H     L+T   +++++ P +KK          +
Sbjct: 152 LPKRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFKIALQ 204

Query: 257 ALKN 260
            L  
Sbjct: 205 FLNQ 208


>gi|15645274|ref|NP_207444.1| hypothetical protein HP0650 [Helicobacter pylori 26695]
 gi|2313777|gb|AAD07718.1| predicted coding region HP0650 [Helicobacter pylori 26695]
          Length = 196

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 59/184 (32%), Gaps = 13/184 (7%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            ++   + + + C     S   +         L  I  TP    +      +     ML+
Sbjct: 24  KQVYEGIENCNLCKRHQNSK-PVIGLFNPTSKLTFITLTP--MLDSQLNFLNNLKAAMLE 80

Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++Q           I  +       N      E+  C   +  Q++  + K+++  G  
Sbjct: 81  SIIQKVFNCPLKDCSILSLLKC--DSNSLNLEEEINACLFHLTWQLDNSASKVIVVFGEI 138

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                 N       ++ G+  +L T H     L+T   +++++ P +KK          +
Sbjct: 139 LPKRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFKIALQ 191

Query: 257 ALKN 260
            L  
Sbjct: 192 FLNQ 195


>gi|315178413|gb|ADT85327.1| uracil-DNA glycosylase [Vibrio furnissii NCTC 11218]
          Length = 190

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 65/179 (36%), Gaps = 18/179 (10%)

Query: 80  LKSLLRSFHDCHLCSTS----LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           L  LLR    C +C  +     + +     E   ++IIG  P    + S  P++  +G+ 
Sbjct: 2   LHDLLRDIRQCRVCEPALPLGANPVI-QAHEAARILIIGQAPGIRVHQSSIPWNDPSGDR 60

Query: 136 LDKMLQ---SIEIMRTQIHISMISPWHPPGNR--NLSNIEMEICRPIIMRQIELISPKIL 190
           L + L           QI I  +   +P   +  +L                +L + ++ 
Sbjct: 61  LRRWLDIDKETFYDPKQIAIMPMGLCYPGKGKSGDLPPRRECAPLWHQSVLAQLPNIQMT 120

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248
           L IG   +N++  +      + + +W      +  +P     HP    +  L  KKN W
Sbjct: 121 LLIGQYAQNYYLKDKPATLTETVRQWQRWAPHYLPLP-----HPSP--RNTLWLKKNPW 172


>gi|116492091|ref|YP_803826.1| Uracil-DNA glycosylase [Pediococcus pentosaceus ATCC 25745]
 gi|116102241|gb|ABJ67384.1| Uracil-DNA glycosylase [Pediococcus pentosaceus ATCC 25745]
          Length = 194

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/161 (11%), Positives = 46/161 (28%), Gaps = 16/161 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
                ++I+G  P      +   ++ ++G+ L   +              + P       
Sbjct: 32  NPQAKILIVGQAPGKKVQDTEIMWNDQSGDRLRAWMGISRDTFYNSGDIAVIPMDFYYPG 91

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN-NDAQKTYQNLGKWSN 218
                     +    +        + + ++ L IG+  +  + N   +  T   +  + N
Sbjct: 92  KAKSGDVPPRKEVAEKWHQKMLDIMPNIQLTLLIGSYAQKHYLNVPRSTTTTNLVQNYRN 151

Query: 219 LCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITL 254
               +        VHP       L + P  ++     L  +
Sbjct: 152 FLPEY-----FPLVHPSPRNNIWLAKNPWFEQEVVPELQKI 187


>gi|217031974|ref|ZP_03437475.1| hypothetical protein HPB128_187g1 [Helicobacter pylori B128]
 gi|298736347|ref|YP_003728873.1| hypothetical protein HPB8_852 [Helicobacter pylori B8]
 gi|216946284|gb|EEC24890.1| hypothetical protein HPB128_187g1 [Helicobacter pylori B128]
 gi|298355537|emb|CBI66409.1| conserved hypothetical protein [Helicobacter pylori B8]
          Length = 196

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 59/184 (32%), Gaps = 13/184 (7%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            ++   + + + C     S   +         L  I  TP    +      +     ML+
Sbjct: 24  KQVHEGIENCNLCKRHQHSK-PVIGIFNPTSKLAFITLTP--MLDSQLHFLNNLKAAMLE 80

Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++Q           I  +       N      E+  C   +  Q++  + K+++  G  
Sbjct: 81  SIIQKVFNYPLKDCSILSLLKC--DSNSLNLEEEINACLFHLTWQLDNSASKVIVVFGEI 138

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                 N       ++ G+  +L T H     L+T   +++++ P +KK          +
Sbjct: 139 LPKRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFKIALQ 191

Query: 257 ALKN 260
            L  
Sbjct: 192 FLNQ 195


>gi|121596228|ref|YP_988124.1| phage SPO1 DNA polymerase-like protein [Acidovorax sp. JS42]
 gi|120608308|gb|ABM44048.1| phage SPO1 DNA polymerase-related protein [Acidovorax sp. JS42]
          Length = 258

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 51/142 (35%), Gaps = 15/142 (10%)

Query: 98  STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP 157
             +      G   +++  +P+ ++     P +G +G +LD ML+++ + R          
Sbjct: 107 QAVPPE--LGAGWLVVLESPTPAE-----PLAGDSGRLLDNMLRAMRLHRHPRTFVATLN 159

Query: 158 WHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS 217
            H PG       E       + + ++ + P ++L +G         +      +      
Sbjct: 160 RHAPG----LTAEGLEPAAGLQQALQTLRPSLVLVLGLGAARVVLGSREPL-GRLRATAH 214

Query: 218 NLCTPHSIIPTLATVHPQELIQ 239
           +L       P + +  P  L++
Sbjct: 215 HLP---DGTPAVVSYDPAYLLR 233


>gi|163756115|ref|ZP_02163231.1| hypothetical protein KAOT1_09626 [Kordia algicida OT-1]
 gi|161323989|gb|EDP95322.1| hypothetical protein KAOT1_09626 [Kordia algicida OT-1]
          Length = 191

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 70/201 (34%), Gaps = 29/201 (14%)

Query: 77  LHELKSLLRSFHDC----HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
           +  L   + S   C     L    ++ + A   E   +++IG  P    + +G P++  +
Sbjct: 1   MENLLEEILSCTICKDFLPL---GVNPVLAA-HESSKIILIGQAPGLKVHQNGIPWNDMS 56

Query: 133 GNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ--IELISP 187
           G  L + L     I      I +  +   +P    +      + C     +Q   ++   
Sbjct: 57  GKRLRQWLNVSDEIFYDAKNIALIPMGFCYPGKGTSGDLPPRKECAAAWHKQLLTKMQEA 116

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII--PTLATVHPQ-----ELIQY 240
           +++L +G   + ++  ++A+K        +   + +           HP       L + 
Sbjct: 117 ELILLVGQYAQKYYLKDEAKK------TLTETVSNYESYLPKFFPLPHPSPRNRFWLRKN 170

Query: 241 PLIKKNTWHALITLKKALKNL 261
           P  +K     +  L+  +  L
Sbjct: 171 PWFEKEV---IPKLQDKVNRL 188


>gi|119774340|ref|YP_927080.1| hypothetical protein Sama_1203 [Shewanella amazonensis SB2B]
 gi|119766840|gb|ABL99410.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
          Length = 197

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 60/191 (31%), Gaps = 28/191 (14%)

Query: 75  CSLHELKSLLRSFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
            +L  L   +R    C  L       + A       ++I G  P  + +  G+PF   +G
Sbjct: 2   QTLAALLQEVRGCQLCAGLPLGPKPILQAESD--AKILIAGQAPGANTHEKGRPFDDASG 59

Query: 134 NMLDKML---QSIEIMRTQIHISMISPW---------HPPGNRNLSNIEMEICRPIIMRQ 181
           + L   L   ++      +  I  +               G++          R  ++  
Sbjct: 60  DRLRHWLGVDKACFYDPGRFAILPMGFCFPGAIIRHGRRQGDKPPRPECAPAWRKQLLSH 119

Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----E 236
           +   + ++ L +G    ++        T +     ++  T    +  L   HP       
Sbjct: 120 LP--NVELTLLLGTYALDWHLPEHRGLTLEA----TDWQTHWPKLLVLP--HPSPRNGLW 171

Query: 237 LIQYPLIKKNT 247
           L ++P  + N 
Sbjct: 172 LKRHPEFEANV 182


>gi|83941237|ref|ZP_00953699.1| uracil-DNA glycosylase, putative [Sulfitobacter sp. EE-36]
 gi|83847057|gb|EAP84932.1| uracil-DNA glycosylase, putative [Sulfitobacter sp. EE-36]
          Length = 231

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 67/225 (29%), Gaps = 27/225 (12%)

Query: 53  ITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL------STICATQTE 106
           I     + +P    A  +     +  +++  L     C     +       + +      
Sbjct: 15  IAERHRVTAPFETGAPPLRSTPMT--DIRPELSQCTLCADRFAATATGHRPNPVVWF-QP 71

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGN 163
           G  L+I    P    + +  PF   +G  L   L   ++    R ++ I  ++   P  +
Sbjct: 72  GARLLIASQAPGLKVHEANTPFWDASGKRLRDWLGVDETTFYDRNRVAIIPMAFCFPGYD 131

Query: 164 RNL---SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220
                     +            +   ++ + IG     +          + +  W N  
Sbjct: 132 AKGSDLPPPPICAKTWRARALDTVPDVRLTVLIGAYAMRYHL-PGFTTVTRAVADWQNHP 190

Query: 221 TPHSIIPTLATVHPQELIQYPLI-KKNTW--HALI-TLKKALKNL 261
                    A  HP    +     KKN W    ++  L+ A++N+
Sbjct: 191 KG-----VFALPHPSW--RNTGWLKKNPWFEEDVLPRLRAAVRNV 228


>gi|317178987|dbj|BAJ56775.1| hypothetical protein HPF30_0678 [Helicobacter pylori F30]
          Length = 209

 Score = 54.4 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 59/184 (32%), Gaps = 13/184 (7%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            ++   + + + C     S   +         L  I  TP    +      +     ML+
Sbjct: 37  KQVYEGIENCNLCKRHQNSK-PVIGLFNPTSKLTFITLTP--MLDSQSNFLNNLKAAMLE 93

Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++Q           I  +       N      E+  C   +  Q++  + K+++  G  
Sbjct: 94  SIIQKVFNYPLKDCSILSLLKC--DSNSLNLEEEINACLFHLTWQLDNSASKVIVVFGEI 151

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                 N       ++ G+  +L T H     L+T   +++++ P +KK          +
Sbjct: 152 LPKRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFKIALQ 204

Query: 257 ALKN 260
            L  
Sbjct: 205 FLNQ 208


>gi|298291612|ref|YP_003693551.1| uracil-DNA glycosylase superfamily [Starkeya novella DSM 506]
 gi|296928123|gb|ADH88932.1| Uracil-DNA glycosylase superfamily [Starkeya novella DSM 506]
          Length = 226

 Score = 54.4 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/239 (11%), Positives = 60/239 (25%), Gaps = 50/239 (20%)

Query: 54  TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113
             +    +P+  + +        L   +   R+         +   + +       L+I+
Sbjct: 6   AAVFEPPAPVEAEPERDCPFCPRLVAFREHWRAAE--PDWHNA--PVPSFGPVDGRLLIV 61

Query: 114 GYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEI-------------MRTQIHISMISPW 158
           G  P     N +G+PF+G   G +L   L                        ++     
Sbjct: 62  GLAPGLRGANRTGRPFTGDYAGELLYSTLIKFGFATGVFEARSDDSLKLADSRLTNAVRC 121

Query: 159 HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF---NNDAQKTYQNLGK 215
            PP N+  ++        +      L S   ++ +G    +           +     G 
Sbjct: 122 VPPENKPTTDEMRNCRPFLAATIGLLPSLSAIVALGKIAHDQVLAAHGEKLSRYKFAHGA 181

Query: 216 WSNL-------------CTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
              L                ++ + T    H                    ++  L +L
Sbjct: 182 VHRLGEVVLFDSYHCSRYNTNTGVLTTPMFH---------------AVFAKVRAHLDSL 225


>gi|114570129|ref|YP_756809.1| uracil-DNA glycosylase superfamily protein [Maricaulis maris MCS10]
 gi|114340591|gb|ABI65871.1| Uracil-DNA glycosylase superfamily [Maricaulis maris MCS10]
          Length = 220

 Score = 54.4 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 56/188 (29%), Gaps = 22/188 (11%)

Query: 64  VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD-N 122
             +A         L   +  +   H       +   + +  ++   L+IIG  P     N
Sbjct: 6   PPEAPLDCPLCPRLVAFREAVAVDH--PDWHNA--PVESFGSDQARLLIIGLAPGLRGAN 61

Query: 123 ISGKPFSGK-TGNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSN 168
            +G+PF+G   G++L   L      R                 I+      PP N+ +  
Sbjct: 62  RTGRPFTGDWAGDLLYATLDRFGFSRGTYASHAGDGVELVDAMITNAVRCVPPENKPVGA 121

Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSNLCTPHSI 225
                   +  R   +     +L +G  + +          +         +++  P+  
Sbjct: 122 EANACRPFLTSRIAAMPRLTAVLCLGKISHDNTLRALGLPLKTVKFGHAATADIPGPNGS 181

Query: 226 IPTLATVH 233
           +    + H
Sbjct: 182 LRLFDSYH 189


>gi|256027347|ref|ZP_05441181.1| DNA polymerase [Fusobacterium sp. D11]
 gi|289765315|ref|ZP_06524693.1| DNA polymerase [Fusobacterium sp. D11]
 gi|289716870|gb|EFD80882.1| DNA polymerase [Fusobacterium sp. D11]
          Length = 195

 Score = 54.4 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 69/190 (36%), Gaps = 12/190 (6%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             +LK    S  +  L                D++ IG  P        K     +G  L
Sbjct: 8   WEDLKFEAGSIGNELLPKDRQEVYIGMGDRNADVLFIGNDPKLYLAEDYKVEPQSSGAFL 67

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++L  +E +    +I+ +S       +N +  E +    ++  QI LISPKI++F+G +
Sbjct: 68  IRLLDVVEYLPETYYITTLSK-REIKIKNFNEEERKKLIDLLFMQILLISPKIVVFLGKE 126

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIKK-----NTWH 249
                  N         GK+         I T  T   + +I  +    KK     N ++
Sbjct: 127 VAQ-LVENKEIDFDTERGKFKKWRGD---IETYLTYDVETVIKARNDSGKKAVVALNFFN 182

Query: 250 ALITLKKALK 259
            +  +K+ L 
Sbjct: 183 DIKNVKERLN 192


>gi|237744562|ref|ZP_04575043.1| DNA polymerase [Fusobacterium sp. 7_1]
 gi|260494441|ref|ZP_05814571.1| DNA polymerase [Fusobacterium sp. 3_1_33]
 gi|229431791|gb|EEO42003.1| DNA polymerase [Fusobacterium sp. 7_1]
 gi|260197603|gb|EEW95120.1| DNA polymerase [Fusobacterium sp. 3_1_33]
          Length = 195

 Score = 54.4 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 69/190 (36%), Gaps = 12/190 (6%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             +LK    S  +  L                D++ IG  P        K     +G  L
Sbjct: 8   WEDLKFEAGSIGNELLPKDRQEVYIGMGDRNADVLFIGNDPKLYLAEDYKVEPQSSGAFL 67

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++L  +E +    +I+ +S       +N +  E +    ++  QI LISPKI++F+G +
Sbjct: 68  IRLLDVVEYLPETYYITTLSK-REIKIKNFNEEERKKLIDLLFMQILLISPKIVVFLGKE 126

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIKK-----NTWH 249
                  N         GK+         I T  T   + +I  +    KK     N ++
Sbjct: 127 VAQ-LVENKEIDFDTERGKFKKWRGD---IETYLTYDVETVIKARNDSGKKAVVALNFFN 182

Query: 250 ALITLKKALK 259
            +  +K+ L 
Sbjct: 183 DIKNVKERLN 192


>gi|254560637|ref|YP_003067732.1| hypothetical protein METDI2180 [Methylobacterium extorquens DM4]
 gi|254267915|emb|CAX23781.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
          Length = 212

 Score = 54.4 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 51/181 (28%), Gaps = 16/181 (8%)

Query: 70  IAQKACSLHELKSLLRSFHDC--------HLCSTSLSTICATQTEGQDLMIIGYTPSDSD 121
           ++    +     + LR+   C         L       +    +    L+I    P +  
Sbjct: 1   MSAAPENFEATAARLRACRLCRDAPLYGAPLPHEPRPVV--QGSATARLLIASQAPGNRA 58

Query: 122 NISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHP---PGNRNLSNIEMEICR 175
           + SG PFS  +G  L   L   ++      ++ I  +    P       +          
Sbjct: 59  HRSGIPFSDPSGRRLRAWLGLDEAAFYDPARVAILPMGACFPGLDAKGGDRPPRRECAPT 118

Query: 176 PIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
                   L    ++L IG   + +          + + +W  +    +    L   HP 
Sbjct: 119 WRADLLAGLPQLDLILVIGQYAQAWHLGPRPGGLTETVARWRTIRDASARPRVLPLPHPS 178

Query: 236 E 236
            
Sbjct: 179 W 179


>gi|217034759|ref|ZP_03440157.1| hypothetical protein HP9810_861g1 [Helicobacter pylori 98-10]
 gi|216942703|gb|EEC22264.1| hypothetical protein HP9810_861g1 [Helicobacter pylori 98-10]
          Length = 196

 Score = 54.4 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 59/184 (32%), Gaps = 13/184 (7%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            ++   + + + C     S   +         L  I  TP    +      +     ML+
Sbjct: 24  KQVYEGIENCNLCKRHQNSK-PVIGLFNPTSKLTFITLTP--MLDSQLNFLNNLKAVMLE 80

Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++Q           I  +       N      E+  C   +  Q++  + K+++  G  
Sbjct: 81  SIIQKVFNCPLKDCSILSLLKC--DSNSLNLEEEINACLFHLTWQLDNSASKVIVVFGEI 138

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                 N       ++ G+  +L T H     L+T   +++++ P +KK          +
Sbjct: 139 LPKRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFKIALQ 191

Query: 257 ALKN 260
            L  
Sbjct: 192 FLNQ 195


>gi|121602333|ref|YP_988782.1| uracil DNA glycosylase family protein [Bartonella bacilliformis
           KC583]
 gi|120614510|gb|ABM45111.1| uracil DNA glycosylase family protein [Bartonella bacilliformis
           KC583]
          Length = 228

 Score = 54.4 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 46/163 (28%), Gaps = 24/163 (14%)

Query: 91  HLCSTS--LSTICATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEI- 145
            L   +               L+I+G  P     N +G+PF+G   G +L   L+     
Sbjct: 40  PLWHNAPVSPFFPYKGPATTRLLIVGLAPGLRGANRTGRPFTGDYAGQLLYSTLKKFGFA 99

Query: 146 ------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFI 193
                             I       PP N+  S                L   K ++ +
Sbjct: 100 QGVFEERPDDSLKLIDAAIVNSVRCVPPQNKPSSIEINTCRYFFAPLLKNLPKLKAVITL 159

Query: 194 GNKTKNF---FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
           G+          N +A       GK +N+      +   ++ H
Sbjct: 160 GSIAHLSTIRALNANASAHPFGHGKINNI----GKLRIFSSYH 198


>gi|330719196|ref|ZP_08313796.1| uracil DNA glycosylase superfamily protein [Leuconostoc fallax KCTC
           3537]
          Length = 202

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/158 (12%), Positives = 60/158 (37%), Gaps = 17/158 (10%)

Query: 99  TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMI 155
            I +   +   ++I+G  P      +G  ++  +G+ L + +   + I     +I +  +
Sbjct: 23  PIFSV-NKAARILIVGQAPGKKVQETGIMWNDASGDRLREWMGIDRDIFYESGEIAVIPM 81

Query: 156 SPWHPPGNRNL--SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL 213
             ++P   ++      +    +       ++ + ++ + IG   + ++ +  A+      
Sbjct: 82  DFYYPGKAKSGDMPPRKGVAEKWHTRLLAQMPNLQLTILIGAYAQKYYLHLTAKD----- 136

Query: 214 GKWSNLCTPHSII--PTLATVHPQELIQYPLI-KKNTW 248
            K +++   +          VHP    +  +  K+N W
Sbjct: 137 -KITDIVANYQAYLPQYFPIVHPSP--RNNIWLKRNAW 171


>gi|134293731|ref|YP_001117467.1| uracil-DNA glycosylase superfamily protein [Burkholderia
           vietnamiensis G4]
 gi|134136888|gb|ABO58002.1| Uracil-DNA glycosylase superfamily [Burkholderia vietnamiensis G4]
          Length = 214

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 56/188 (29%), Gaps = 26/188 (13%)

Query: 76  SLHELKSLLRSFHDC----HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
           SL  L + + +   C     L       +         ++I+G  P    + SG P+   
Sbjct: 8   SLDVLLTEIHACRTCEAELPLGP---RPVL-RAHRDARVLIVGQAPGARVHASGIPWDDA 63

Query: 132 TGNMLDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIEL 184
           +G  L   L          T+  I  +   +P     G+         +    ++ ++  
Sbjct: 64  SGKRLRDWLGVDADTFYDETRFAIVPMGFCYPGRGASGDNPPRPECAALWLDRLLAELPS 123

Query: 185 ISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI 243
           I  ++ L IG   +  F  +         +  W +          L   HP    +    
Sbjct: 124 I--RLTLLIGQYAQRHFLRDARKATLTDTVQAWRDYGPG-----VLPLPHPSP--RNQGW 174

Query: 244 -KKNTWHA 250
            K + W  
Sbjct: 175 FKHHPWFD 182


>gi|49475577|ref|YP_033618.1| hypothetical protein BH08120 [Bartonella henselae str. Houston-1]
 gi|49238384|emb|CAF27611.1| hypothetical protein BH08120 [Bartonella henselae str. Houston-1]
          Length = 211

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 58/189 (30%), Gaps = 21/189 (11%)

Query: 72  QKACSLHELKSLLRSFHDC--------HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123
           Q    + +L+  + S   C         L       +         + I G  P    + 
Sbjct: 4   QPDNQITKLEKKIYSCRVCIKYPRYLPPL-PHEPKPVVYLSNRAL-IAIAGQAPGLRVHE 61

Query: 124 SGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180
           S  PF+ ++G  L   L   +     R+   I  +    P  ++N S++        I  
Sbjct: 62  SSIPFNDRSGERLRNWLDVTRDEFYNRSLFAIVPMGFCFPGYDQNKSDLPPRRECQEIWH 121

Query: 181 Q---IELISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCT--PHSIIPTLATVHP 234
           +     +   K++L IG+  + +       +     +  W N+ +         +   HP
Sbjct: 122 EKVFQAMPQIKLVLAIGSYAQKWHIAKLKHKTVSATVSDWKNILSIRQPRGYNVMPLPHP 181

Query: 235 QELIQYPLI 243
               +    
Sbjct: 182 SW--RNTSW 188


>gi|317009334|gb|ADU79914.1| hypothetical protein HPIN_03390 [Helicobacter pylori India7]
          Length = 192

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 59/184 (32%), Gaps = 13/184 (7%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            ++   + + + C     S   +         L  I  TP    +      +     ML+
Sbjct: 20  KQVHEGIENCNLCKRHQHSK-PVIGLFNPTSKLAFITLTP--MLDSQLNFLNNLKAAMLE 76

Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++Q           I  +       N      E+  C   +  Q++  + KI++  G  
Sbjct: 77  SIIQKVFNCPLKDCSILSLLKC--DSNSLNLEEEINACLFHLTWQLDNSASKIIVVFGEI 134

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                 N       ++ G+  +L T H     L+T   +++++ P +KK          +
Sbjct: 135 LPKRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFKIALQ 187

Query: 257 ALKN 260
            L  
Sbjct: 188 FLNQ 191


>gi|308061980|gb|ADO03868.1| hypothetical protein HPCU_03530 [Helicobacter pylori Cuz20]
          Length = 209

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 60/184 (32%), Gaps = 13/184 (7%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            ++   + + + C     S   +         L  I  TP    +      +     ML+
Sbjct: 37  KQVYEGIENCNLCKRHQNSK-PVIGLFNPTSKLTFITLTP--MLDSQLNFLNNLKAAMLE 93

Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++Q           +  +       N      E+  C   +  Q++  + K+++  G  
Sbjct: 94  SIIQKVFNCPLKDCSVLSLLKC--DSNSLNLEEEINACLFHLTWQLDNSASKVIVVFGEI 151

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                 N       ++ G+  +L T H     L+T   +++++ P +KK       T  +
Sbjct: 152 LPQRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFKTALQ 204

Query: 257 ALKN 260
            L  
Sbjct: 205 FLNQ 208


>gi|325287709|ref|YP_004263499.1| Uracil-DNA glycosylase superfamily [Cellulophaga lytica DSM 7489]
 gi|324323163|gb|ADY30628.1| Uracil-DNA glycosylase superfamily [Cellulophaga lytica DSM 7489]
          Length = 190

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 65/167 (38%), Gaps = 15/167 (8%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           + EL S ++    C   L       + A  +    ++I+G  P    + +G P++ K+G 
Sbjct: 1   MQELLSEIKKCTVCSAKLALGPRPIVSA--SAKSKIVIVGQAPGSIVHNTGIPWNDKSGE 58

Query: 135 MLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIEL--ISPKI 189
            L   +           ++ I  +   +P   ++      + C P+  +QI     + ++
Sbjct: 59  NLRNWMGISTEDFYNTDKVAIIPMGFCYPGMGKSGDLPPTKECAPLWHKQILNGIKNVRL 118

Query: 190 LLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQ 235
            L IG   ++++  N A+KT  Q +  +      +     +   HP 
Sbjct: 119 TLLIGAYAQSYYLGNKAEKTLTQTVKNYHTYLPNY-----MVLPHPS 160


>gi|88813712|ref|ZP_01128938.1| hypothetical protein NB231_01569 [Nitrococcus mobilis Nb-231]
 gi|88789031|gb|EAR20172.1| hypothetical protein NB231_01569 [Nitrococcus mobilis Nb-231]
          Length = 224

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 46/178 (25%), Gaps = 33/178 (18%)

Query: 86  SFHDCH-----LCSTSL-------STICATQTEGQDLMIIGYTPSDSDNI-SGKPFSGKT 132
               C      L  T           + A       L+++G  P       +G+PF+G  
Sbjct: 18  DCTACPRLASFLRETRALYPAYYARPVPAFGPLDARLLVVGLAPGKHGANATGRPFTGDY 77

Query: 133 -GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPII 178
            G +L + L                        ++      PP N+  ++      R + 
Sbjct: 78  AGILLYQTLFDTGFSNQARADRPDDGLELYDCRVTNAVRCLPPANKPSASEVNNCSRFLG 137

Query: 179 MRQIELISPKILLFIGNKTKNFFF---NNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
                  S  I+L +G               +      G    L    +    L + H
Sbjct: 138 YDLAATPSGGIVLALGRIAHEAVVRCEGYRLRDYPFAHGARHRLSRRRT---LLDSYH 192


>gi|330828236|ref|YP_004391188.1| Uracil-DNA glycosylase superfamily [Aeromonas veronii B565]
 gi|328803372|gb|AEB48571.1| Uracil-DNA glycosylase superfamily [Aeromonas veronii B565]
          Length = 195

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 59/178 (33%), Gaps = 16/178 (8%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
             + +L   +R+   C               E   L+IIG  P    + SG P+   +G+
Sbjct: 2   QRIDKLFEQIRACRLCEAHLPLGPRPVIRGAESARLLIIGQAPGTRVHASGIPWDDPSGD 61

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHP--PGNRNLSNIEMEICRPIIMRQIELISPKI 189
            L + L   ++     ++I I  +   +P    + +L               + L + ++
Sbjct: 62  RLRQWLGVDKATFYDESRIAIMPMGLCYPGRGKSGDLPPRPECAPTWHDKVLMLLPNIEL 121

Query: 190 LLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYP 241
            L IG   + ++            +  W++       +P     HP       L + P
Sbjct: 122 TLLIGQYAQAYYLRGAAKGSLTDTVRSWADYGPGWLPLP-----HPSPRNTLWLRKNP 174


>gi|319404293|emb|CBI77886.1| conserved hypothetical protein [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 211

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 60/193 (31%), Gaps = 18/193 (9%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTE------GQDLMIIGYTPSDSDNISG 125
           ++   + +L+  + S   C      L  +               + I G  P    + S 
Sbjct: 4   KQCEHIIKLEKDIHSCRVCIKHPHYLPPLPHEPRPVVYLSNTASIAIAGQAPGLRVHESL 63

Query: 126 KPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ- 181
            PF+  +G  L   L         R+   I  +    P    N S++        I  + 
Sbjct: 64  IPFNDCSGVRLRNWLGVTSDEFYNRSLFAIVPMGFCFPGYAPNKSDLPPRNECQEIWHEK 123

Query: 182 --IELISPKILLFIGNKTKNF-FFNNDAQKTYQNLGKWSNLCT--PHSIIPTLATVHPQE 236
               +   K++L +G+    +   N   +   + +  W N+ +         +   HP  
Sbjct: 124 VFQAMPQIKLVLAVGSYAHKWHITNLKYKTVSETVSDWKNILSIRQPRGYNVMPLPHPSW 183

Query: 237 LIQYPLI-KKNTW 248
             +     KK+ W
Sbjct: 184 --RNTFWLKKHPW 194


>gi|317181963|dbj|BAJ59747.1| hypothetical protein HPF57_0673 [Helicobacter pylori F57]
          Length = 209

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 59/184 (32%), Gaps = 13/184 (7%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            ++   + + + C     S   +         L  I  TP    +      +     ML+
Sbjct: 37  KQVYEGIENCNLCKRHQNSK-PVIGLFNPTSKLTFITLTP--MLDGQLNFLNNLKAAMLE 93

Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++Q           I  +       N      E+  C   +  Q++  + K+++  G  
Sbjct: 94  SIIQKVFNYPLKDCSILSLLKC--DSNSLNLEEEINACLFHLTWQLDNSASKVIVVFGEI 151

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                 N       ++ G+  +L T H     L+T   +++++ P +KK          +
Sbjct: 152 LPKHLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFKIAFQ 204

Query: 257 ALKN 260
            L  
Sbjct: 205 FLNQ 208


>gi|254419732|ref|ZP_05033456.1| Uracil DNA glycosylase superfamily [Brevundimonas sp. BAL3]
 gi|196185909|gb|EDX80885.1| Uracil DNA glycosylase superfamily [Brevundimonas sp. BAL3]
          Length = 202

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 61/186 (32%), Gaps = 20/186 (10%)

Query: 76  SLHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
            L  + S +R+   C   L  T    +         L+I G  P    + SG PF+  +G
Sbjct: 4   DLDAVLSDIRACRACAGVLPHTPRPVV--RVFPETRLLICGQAPGRRVHESGLPFNDPSG 61

Query: 134 NMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNI-EMEICRPIIMRQIELISPKI 189
           + L   +           +I ++  +  +P       +      C  +   Q+    P++
Sbjct: 62  DRLRDWMGVDYDSFYADRRIGVAAQAFCYPGTAPKGGDHPPPSRCADLWRPQLLDALPQM 121

Query: 190 --LLFIGNKTKNFFFNND-AQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KK 245
              L +G   + +  +    +   + +  W +          LA  HP    +     +K
Sbjct: 122 ELTLLVGGYAQAWALSERAKRNMTETVRAWRDYAPD-----ILALPHPSW--RNTAWLRK 174

Query: 246 NTW-HA 250
           N W   
Sbjct: 175 NPWFED 180


>gi|119470680|ref|ZP_01613348.1| putative uracil-DNA glycosylase family protein [Alteromonadales
           bacterium TW-7]
 gi|119446150|gb|EAW27428.1| putative uracil-DNA glycosylase family protein [Alteromonadales
           bacterium TW-7]
          Length = 196

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 67/194 (34%), Gaps = 21/194 (10%)

Query: 80  LKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
           L   +     C   L   +   I         ++I G  P    + +GKPF+  +GN L 
Sbjct: 6   LIEQVSKCVICEPHLPLGARPVI--QFNANARILIAGQAPGIKVHETGKPFNDASGNRLR 63

Query: 138 KMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLF 192
           + L            I I  +   +P   ++      + C P    Q+    P  ++ + 
Sbjct: 64  EWLGLSVDEFYDPQTIAILPMGFCYPGKGKSGDLPPRKECAPAWRAQLLAALPNLELTIV 123

Query: 193 IGNKTKNFFFNNDAQKTYQNLGK-WSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW-- 248
           +G   + +   +   +    L K W      H ++P     HP    +  +  KKN W  
Sbjct: 124 LGKYAQAYHLPHTKNRPLTELVKSWREYWPEHLVLP-----HPSP--RNNIWLKKNPWFA 176

Query: 249 HALI-TLKKALKNL 261
             ++  L + +  +
Sbjct: 177 EDVLPELAERVAAI 190


>gi|15611662|ref|NP_223313.1| hypothetical protein jhp0595 [Helicobacter pylori J99]
 gi|4155138|gb|AAD06168.1| putative [Helicobacter pylori J99]
          Length = 209

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 61/184 (33%), Gaps = 13/184 (7%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            ++   + + + C     S   I         L  I  TP    +      +     ML+
Sbjct: 37  KQVHEGIENCNLCKRHQHSK-PITGLFNPTSKLAFITLTP--MLDSQLHFLNNLKAAMLE 93

Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++Q           I  +       N      E+  C P +  Q++  +PK+++  G  
Sbjct: 94  SIIQKVFNYPLKDCSILSLLKC--DSNSLNLEEEINACLPHLTWQLDNSAPKVIIVFGEV 151

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                 N       ++ G+  +L T H     L+T   +++++ P +KK          +
Sbjct: 152 LPKRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFKIALQ 204

Query: 257 ALKN 260
            L  
Sbjct: 205 FLNQ 208


>gi|239994750|ref|ZP_04715274.1| uracil-DNA glycosylase [Alteromonas macleodii ATCC 27126]
          Length = 192

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 52/174 (29%), Gaps = 20/174 (11%)

Query: 78  HELKSLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             L    R+   C        + I +T      ++IIG  P    +     F   +G+ L
Sbjct: 9   DALVVKARNCRLCAPHLPHQPNPIFST-APSTKVLIIGQAPGLKAHERNIAFDDPSGDRL 67

Query: 137 DKML---QSIEIMRTQIHISMISPWHP-PGNRNLSNIEMEICRPIIMRQIELISPKILLF 192
              L   +      + I +  +    P   N   +    E         +  + P++ L+
Sbjct: 68  RDWLSVSRETFYNPSLISVLPMGFCFPGYKNGADAPPRKECAPAWHNDFLLYLKPEVTLY 127

Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYP 241
           +G  ++ ++       T           +P      L   HP       L + P
Sbjct: 128 VGRYSQQYYLPQHKTLTEAVR-------SPTETHFVLP--HPSGRNNRWLAKNP 172


>gi|307946593|ref|ZP_07661928.1| uracil-DNA glycosylase superfamily protein [Roseibium sp.
           TrichSKD4]
 gi|307770257|gb|EFO29483.1| uracil-DNA glycosylase superfamily protein [Roseibium sp.
           TrichSKD4]
          Length = 224

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 66/228 (28%), Gaps = 27/228 (11%)

Query: 52  PITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLM 111
           P +N   I S               L +L+  L+  H       +   + +       L+
Sbjct: 2   PGSNPGGIASVPTDPPRDCV-LCPRLVDLRRDLQGQH--PDWFNA--PVPSFGDADPGLL 56

Query: 112 IIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEIM-------------RTQIHISMIS 156
           I+G  P     N +G+PF+G   G++L + +                     Q  I+   
Sbjct: 57  IVGLAPGLRGANRTGRPFTGDYAGDLLYETMLEFGFASGVYEARPDDSLVLHQAMITNAV 116

Query: 157 PWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF---NNDAQKTYQNL 213
              PP N+ +          ++       S + +L +G    + F             + 
Sbjct: 117 RCLPPENKPVGAEVKACRPYLLATLDANPSIRAILALGRIAHDTFLTTFGLKKSLFPFSH 176

Query: 214 GKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
           G    L   +       + H           + T     ++   ++ L
Sbjct: 177 GGRHELGVRNLT--LFDSYHCS--RYNTNTGRLTAEMFKSVFADIRTL 220


>gi|332304641|ref|YP_004432492.1| uracil-DNA glycosylase superfamily protein [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332171970|gb|AEE21224.1| uracil-DNA glycosylase superfamily protein [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 185

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 64/184 (34%), Gaps = 20/184 (10%)

Query: 88  HDCHLCST----SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML--- 140
            +C LC      +   I     +   ++I+G  P    + +  P++  +G  L K L   
Sbjct: 8   RNCQLCKAFLPLAPRPII-QGNQCSKVLIVGQAPGKLAHETNMPWNDASGVRLRKWLGIS 66

Query: 141 QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP-IIMRQIELISPKILLFIGNKTKN 199
                    I I  +   +P   ++      + C P    R I  +S + +L IG   + 
Sbjct: 67  AEKFYDANNIAILPMGFCYPGKAKSGDKPPRKECAPTWHERLINSMSIEHILLIGQYAQT 126

Query: 200 FFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITL 254
           ++ N+    T +    W      + ++P     HP       L ++P  +      +  +
Sbjct: 127 YYLNDKLSLTQRV-TNWKRYQPKYFVLP-----HPSPRNNIWLKKHPWFENEVVPHMQKV 180

Query: 255 KKAL 258
              L
Sbjct: 181 LAKL 184


>gi|170727468|ref|YP_001761494.1| uracil-DNA glycosylase superfamily protein [Shewanella woodyi ATCC
           51908]
 gi|169812815|gb|ACA87399.1| Uracil-DNA glycosylase superfamily [Shewanella woodyi ATCC 51908]
          Length = 208

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 64/210 (30%), Gaps = 31/210 (14%)

Query: 73  KACSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130
           K  +L  L + + +   C   L   +   I    +    ++I+G  P    +  G+ FS 
Sbjct: 2   KTDNLTNLMAQISACQLCQEELPLPAKPII--QLSSESKILIVGQAPGIRAHDHGRAFSD 59

Query: 131 KTGNMLDKML---QSIEIMRTQIHISMISPWHP-------PGNRNLSNIEMEICRPIIMR 180
            +G  L   L          +   I  +    P         + +   ++          
Sbjct: 60  PSGERLRSWLGVSDEQFYDPSLFAILPMGFCFPGTIITNGKKSGDKPPLKRCAETWREAL 119

Query: 181 QIELISPKILLFIGNKTKNFFFNN----DAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ- 235
             +L   ++ + +G    ++              Q + +W +    +     +   HP  
Sbjct: 120 LSQLPQVELTIILGQYAIDYHLGKSAEGKKLTVTQAISQWQDYWPEY-----MVLPHPSP 174

Query: 236 ----ELIQYPLIKKNTWHALITLKKALKNL 261
                L ++P  + N    L  LK  +  L
Sbjct: 175 RNNLFLKKHPECEANL---LPALKARVTKL 201


>gi|188527502|ref|YP_001910189.1| hypothetical protein HPSH_03610 [Helicobacter pylori Shi470]
 gi|188143742|gb|ACD48159.1| hypothetical protein HPSH_03610 [Helicobacter pylori Shi470]
          Length = 192

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 60/184 (32%), Gaps = 13/184 (7%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            ++   + + + C     S   +         L  I  TP    +      +     ML+
Sbjct: 20  KQVYESIENCNLCKRHQNSK-PVIGLFNPTSKLTFITLTP--MLDSQLNFLNNLKAAMLE 76

Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++Q           I  +       N      E+  C   +  Q++  + K+++  G  
Sbjct: 77  SIIQKVFNCPLKDCSILSLLKC--DSNSLNLEEEINACLFHLTWQLDNSASKVIVVFGEI 134

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                 N       ++ G+  +L T H     L+T   +++++ P +KK       T  +
Sbjct: 135 LPKRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALVHFKTALQ 187

Query: 257 ALKN 260
            L  
Sbjct: 188 FLNQ 191


>gi|71906932|ref|YP_284519.1| hypothetical protein Daro_1297 [Dechloromonas aromatica RCB]
 gi|71846553|gb|AAZ46049.1| conserved hypothetical protein [Dechloromonas aromatica RCB]
          Length = 192

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 61/197 (30%), Gaps = 29/197 (14%)

Query: 82  SLLRSFHDCHLCSTSLSTICA-----TQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           +LL     C LC  +                  +++ G  P    + SG PF   +G+ L
Sbjct: 6   ALLNEIRHCQLC--AEHLPLGPRPVLQAARSARILVAGQAPGRKVHASGVPFDDASGDRL 63

Query: 137 DKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIELISPKI 189
            + L   + I     +I I  +    P     G+           R  ++ ++  I  ++
Sbjct: 64  RQWLGVSREIFYDPARIAILPMGFCFPGTGKSGDLPPRPECAPAWRQRVLAELGQI--EM 121

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIK 244
            L IG   + +   +        +  W            L   HP       L + P  +
Sbjct: 122 TLVIGQYAQAYHLPDATGNLTDTVRDWRRHWPA-----VLPLPHPSPRNNLWLSRNPWFE 176

Query: 245 KNTWHALITLKKALKNL 261
                 L  L++ +  +
Sbjct: 177 AEV---LPALRQRVAEV 190


>gi|327483139|gb|AEA77546.1| Hypothetical protein VCLMA_A0232 [Vibrio cholerae LMA3894-4]
          Length = 190

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 58/166 (34%), Gaps = 14/166 (8%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L  L + +R    C   L   + + +         ++IIG       + +  P++  +G 
Sbjct: 2   LESLLTEIRQCTVCEPHLPLGA-NPVI-RAHPAAKILIIGQASGTKVHQTSIPWNDASGE 59

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189
            L + L   +        I I  +   +P   R+      + C P+   ++    P  ++
Sbjct: 60  RLRQWLGLDREAFYCEENIAIMPMGLCYPGKGRSGDLPPRKECAPLWRAKVLEQLPNRQL 119

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
            L IG   ++++ ++      + + +W            L   HP 
Sbjct: 120 TLLIGQYAQHYYLSDKPSTLTETVQQWQRWAPS-----VLPLPHPS 160


>gi|163747271|ref|ZP_02154626.1| uracil-DNA glycosylase, putative [Oceanibulbus indolifex HEL-45]
 gi|161379546|gb|EDQ03960.1| uracil-DNA glycosylase, putative [Oceanibulbus indolifex HEL-45]
          Length = 215

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 53/177 (29%), Gaps = 21/177 (11%)

Query: 76  SLHELKSLLRSFHDCHLC------STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129
           ++ ++++ L +   C               I      G  L+I    P    + +GKPF 
Sbjct: 16  TMKDIRNDLAACRLCADRFAVTATQHRPRPIVWF-KPGARLLIASQAPGKRVHEAGKPFW 74

Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ---IE 183
             +G  L   L   ++    R ++ I  +    P  +   S++          R+     
Sbjct: 75  DMSGTRLRDWLGLDEATFYDRNRVAIVPMGFCFPGYDAKGSDLPPPRVCAQTWREPVLDI 134

Query: 184 LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
           L    + + IG     +        T    G W +           A  HP    + 
Sbjct: 135 LPDLALTVLIGGYAMKYHLPEFRNVTEAVAG-WRDHPPG-----VFALPHPSW--RN 183


>gi|86134616|ref|ZP_01053198.1| Uracil-DNA glycosylase [Polaribacter sp. MED152]
 gi|85821479|gb|EAQ42626.1| Uracil-DNA glycosylase [Polaribacter sp. MED152]
          Length = 190

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 64/194 (32%), Gaps = 19/194 (9%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           + +L + +R+   C   L   +   I A  +E   +++I   P    ++  K +   +G 
Sbjct: 1   MQKLLAEIRNCKLCEPHLDLGARPIIAA--SENSKILLISQAPGRIAHLKNKAWDDPSGK 58

Query: 135 MLDKMLQ---SIEIMRTQIHISMISPWHPPGNR--NLSNIEMEICRPIIMRQIELISPKI 189
           +L K L    S         I       P   +  +    +            +  + ++
Sbjct: 59  VLRKWLHVDESQFYNTDHFAILPAGFCFPGKGKSGDKLPRKECAPLWHSKVMHQFKNVQL 118

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIK 244
            + IGN  + ++  N  +   + +  + +    + ++P     HP       + + P   
Sbjct: 119 KILIGNYAQTYYLKNKPRTLTETVKNYQSFLPEYLVLP-----HPSPRNRFWIQKNPWFT 173

Query: 245 KNTWHALITLKKAL 258
                 L  +   +
Sbjct: 174 NEVIPDLQKVVTKI 187


>gi|58040338|ref|YP_192302.1| Uracil-DNA glycosylase [Gluconobacter oxydans 621H]
 gi|58002752|gb|AAW61646.1| Uracil-DNA glycosylase [Gluconobacter oxydans 621H]
          Length = 201

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 58/187 (31%), Gaps = 19/187 (10%)

Query: 69  SIAQKACSLHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126
           S+      L  L + +R+   C   L   +   I A  +    ++I    P    +I+GK
Sbjct: 4   SVPSPEERLEALLTEVRACRVCEAHLPLGARPLIHA--SATSRILIASQAPGTKAHIAGK 61

Query: 127 PFSGKTGNMLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEICRPIIMR 180
            F   +GN L   L   + I     QI I  +        P   +               
Sbjct: 62  SFYDPSGNRLRDWLGISEDIFYDTRQIAIFPMGLCYPGRLPKGGDNPPRPECAPLWRRRV 121

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
              +   ++ L +G+ ++N         T +    + +    +         HP    + 
Sbjct: 122 LSLMPDIRLTLLVGSYSQNHVLG-RGSVTERVR-NFRDYLPDY-----FPLPHPSW--RT 172

Query: 241 PLIKKNT 247
            + ++  
Sbjct: 173 GVWERKA 179


>gi|239831749|ref|ZP_04680078.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
 gi|239824016|gb|EEQ95584.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
          Length = 213

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 55/191 (28%), Gaps = 20/191 (10%)

Query: 77  LHELKSLLRSFHDCH-------LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129
           L ELK  +R+   C              + +C        + I    P    + +  PF+
Sbjct: 7   LDELKHSIRACRICRDTPRFPPPLPHEPNPVCIVSDT-AKIGICSQAPGIRVHNTSLPFN 65

Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEICRPIIMRQIE 183
             +G+ L + L   +      ++  I  +      +     +L                 
Sbjct: 66  DPSGDRLRQWLGVSREEFYDPSRFAIVPMGFCFPGYDKHGGDLPPRRECRQTWHDRVFAA 125

Query: 184 LISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNL--CTPHSIIPTLATVHPQELIQY 240
           +   + +L +G     +   +   +   + +  W +       +    L   HP    + 
Sbjct: 126 MPQLEFILVVGQYALAYHLPDYRGRNLTETVRNWRHFMETPNQAGRIALPLPHPSW--RN 183

Query: 241 PLI-KKNTWHA 250
               K+N W  
Sbjct: 184 SGWLKRNPWFD 194


>gi|315586670|gb|ADU41051.1| family 4 uracil-DNA glycosylase [Helicobacter pylori 35A]
          Length = 212

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 60/184 (32%), Gaps = 13/184 (7%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            ++   + + + C     S   +         L  I  TP    +      +     ML+
Sbjct: 40  KQVYEGIENCNLCKRHQNSK-PVIGLFNPTSKLTFITLTP--MLDSQLNFLNNLKAAMLE 96

Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++Q           I  +       N      E+  C   ++ Q++  + K+++  G  
Sbjct: 97  SIIQKVFNCPLKDCSILSLLKC--DSNSLNLEEEINACLFHLIWQLDNSTSKVIVVFGEI 154

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                 N       ++ G+  +L T H     L+T   +++++ P +KK          +
Sbjct: 155 LPKRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFKIALQ 207

Query: 257 ALKN 260
            L  
Sbjct: 208 FLNQ 211


>gi|305665885|ref|YP_003862172.1| hypothetical protein FB2170_06375 [Maribacter sp. HTCC2170]
 gi|88710660|gb|EAR02892.1| hypothetical protein FB2170_06375 [Maribacter sp. HTCC2170]
          Length = 189

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 64/179 (35%), Gaps = 22/179 (12%)

Query: 77  LHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           + +L S +R    C  HL       + A       ++IIG  P    + +G P+   +G 
Sbjct: 1   MEKLLSEIRGCEVCKSHLPLGPRPIVAA--HPDSKIVIIGQAPGTKVHKTGVPWDDPSGR 58

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189
            L K L     I    ++I +  +   +P   ++        C P+  + +    P  ++
Sbjct: 59  QLRKWLGVSDEIFYDDSKIALIPMGFCYPGKGKSGDLPPRTECAPLWHKPMLDKMPNLEL 118

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII--PTLATVHPQ-----ELIQYP 241
           ++ IG   + ++   +A+K        +     +       L   HP       L + P
Sbjct: 119 VILIGMYAQKYYLGKEAKK------TLTETVANYESYLPKCLPLPHPSPRNRFWLTKNP 171


>gi|304392072|ref|ZP_07374014.1| uracil-DNA glycosylase family protein [Ahrensia sp. R2A130]
 gi|303296301|gb|EFL90659.1| uracil-DNA glycosylase family protein [Ahrensia sp. R2A130]
          Length = 225

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 52/192 (27%), Gaps = 41/192 (21%)

Query: 79  ELKSLLRSFHDCH-LCSTSLS-----------TICATQT-------EGQDLMIIGYTPSD 119
            L   LR    C  L                  + +          +   L+++G  P  
Sbjct: 9   ALADPLRDCPLCPRLVEFRHESQEKYPHFYNGPVPSWGPDAADGGAKSVKLLVVGLAPGM 68

Query: 120 SDNI-SGKPFSGK-TGNMLDKMLQSI-------------EIMRTQIHISMISPWHPPGNR 164
                +G+PF+G   G++L   L                 +      I+      PP N+
Sbjct: 69  KGANATGRPFTGDWAGDLLYATLDKFDFTEGTFAAHPGDGLKLKGCAITNAVRCVPPQNK 128

Query: 165 NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF---FNNDAQKTYQNLGKWSNLCT 221
            +        + +     EL + K+++ +G    +                     N  T
Sbjct: 129 PVGAEINTCRQFLTQTLDELPNLKVMVTLGKIAHDSLSRTLGERVAAHPFG----HNRET 184

Query: 222 PHSIIPTLATVH 233
                  +++ H
Sbjct: 185 AMGGYAVVSSYH 196


>gi|299135109|ref|ZP_07028300.1| Uracil-DNA glycosylase superfamily [Afipia sp. 1NLS2]
 gi|298590086|gb|EFI50290.1| Uracil-DNA glycosylase superfamily [Afipia sp. 1NLS2]
          Length = 234

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 49/176 (27%), Gaps = 31/176 (17%)

Query: 88  HDCHLC--------STS-------LSTICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131
            DC LC                   + +         L+I+G  P     N +G+PF+G 
Sbjct: 31  RDCPLCLRLASFREDNRAAHPDWFNAPVPQFGGVDAALLIVGLAPGLQGANRTGRPFTGD 90

Query: 132 T-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177
             G++L + L                        I       PP N+          + +
Sbjct: 91  YAGDLLYQTLLDYGFASGHYEARPNDGLKLVNCRIGNAVHCVPPQNKPTPAEINTCRQFL 150

Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
           +    E+   + ++ +G  + +               K       H  I   ++ H
Sbjct: 151 VGTIAEMPRLRAIVSLGRISHDSTLKALGLPLRAAPFK-HGGEFQHDRIRIFSSYH 205


>gi|208434572|ref|YP_002266238.1| hypothetical protein HPG27_612 [Helicobacter pylori G27]
 gi|208432501|gb|ACI27372.1| hypothetical protein HPG27_612 [Helicobacter pylori G27]
          Length = 196

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 60/184 (32%), Gaps = 13/184 (7%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            ++   + + + C     S   +         L  I  TP    +      +     ML+
Sbjct: 24  KQVHEGIENCNLCKRHQHSK-PVIGLFNPTSKLAFITLTP--MLDSQLHFLNNLKAAMLE 80

Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++Q           I  +       N      E+  C P +  Q++  + K+++  G  
Sbjct: 81  SIIQKVFNYPLKDCSILSLLKC--DSNSLNLEEEINACLPHLTWQLDNSASKVIVVFGEV 138

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                 N       ++ G+  +L T H     L+T   +++++ P +KK          +
Sbjct: 139 LPKRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFKIALQ 191

Query: 257 ALKN 260
            L  
Sbjct: 192 FLNQ 195


>gi|110833891|ref|YP_692750.1| hypothetical protein ABO_1030 [Alcanivorax borkumensis SK2]
 gi|110647002|emb|CAL16478.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
          Length = 198

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 53/167 (31%), Gaps = 16/167 (9%)

Query: 79  ELKSLLRSFHDCHLCST----SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           +L  LL     C LC +        +      G  L+I+G  P    + +G P++  +G+
Sbjct: 3   QLIDLLEDVRACRLCESHLPLGPRPVVQAGQ-GARLLIVGQAPGTRVHETGIPWNDPSGD 61

Query: 135 MLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEICRPIIMRQIELISPK 188
            L   L   +      +QI I  +         G       E    +       EL + +
Sbjct: 62  RLRDWLQVGRETFYDESQIAIIPMGLCYPGRGKGGDLPPRPEC-APQWHGPLLAELPNLR 120

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
           + L +G   + F+     +     +  ++               HP 
Sbjct: 121 LTLLVGRYAQRFYLAKPGKTLTDTVRHFARALDQG----FFPLPHPS 163


>gi|229827665|ref|ZP_04453734.1| hypothetical protein GCWU000182_03054 [Abiotrophia defectiva ATCC
           49176]
 gi|229788125|gb|EEP24239.1| hypothetical protein GCWU000182_03054 [Abiotrophia defectiva ATCC
           49176]
          Length = 196

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 56/165 (33%), Gaps = 16/165 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNML--DKMLQSIEIMRTQIHISMISPWHPPG 162
           +    ++I+G  P      S  PF+ K+G  L     +        +I I  +  + P  
Sbjct: 36  SPKARILIVGQAPGKKVEDSLIPFNDKSGEKLIQWMGIDRDTFYSEKIAIMPMDFYFPGK 95

Query: 163 NRNLSNIEMEICRPIIMRQIELISPKI--LLFIGNKTKNFFFNND-AQKTYQNLGKWSNL 219
            +               ++I  + PK+   + IG  +  ++  +   +   + +  +   
Sbjct: 96  GKTGDLPPRSFIAKEYHKEILALMPKVSLTILIGAYSMKYYLGSKMGKNLTETVKNYREY 155

Query: 220 CTPHSIIPTLATVHPQEL-----IQYPLIKKNTWHALI-TLKKAL 258
              +  I     VHP  L      + P  ++     L   +K+ L
Sbjct: 156 LPDYFTI-----VHPSPLNFFWQRKNPWFEEEVVPELQRRVKEVL 195


>gi|319407022|emb|CBI80659.1| conserved hypothetical protein [Bartonella sp. 1-1C]
          Length = 222

 Score = 53.6 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 43/151 (28%), Gaps = 22/151 (14%)

Query: 101 CATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEI------------- 145
                    L+I+G  P     N +G+PF+G   G++L   L+                 
Sbjct: 46  PHKGAATTRLLIVGLAPGLRGANRTGRPFTGDYAGHLLYSTLKKFGFAQGTFAERSDDSL 105

Query: 146 MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FF 202
                 I       PP N+                   L   K ++ +G+   N      
Sbjct: 106 ELIDTAIVNSVRCVPPENKPTGTEINTCRHFFSPLLTNLPQLKAIITLGSIAHNSTIRAL 165

Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
           N          GK S++      +   ++ H
Sbjct: 166 NAKTSAHPFGHGKISDI----GRLRIFSSYH 192


>gi|312278435|gb|ADQ63092.1| Uracil-DNA glycosylase, putative [Streptococcus thermophilus ND03]
          Length = 194

 Score = 53.6 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/196 (11%), Positives = 59/196 (30%), Gaps = 18/196 (9%)

Query: 75  CSLHELKSLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
            +L EL   + +           +  + +   +   + I+G  P      SG  ++  +G
Sbjct: 2   ETLEELTQAIMADEQNKTYTEQGIKPLFSI-PKTARINIVGQAPGIRAQESGLYWNDPSG 60

Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLS-----NIEMEICRPIIMRQIELISPK 188
           + L   +        +  +  I P       +         +    +          + +
Sbjct: 61  DNLRDWMGVSREEFYESGLFAIVPMDFYFPGHGKSGDLGPRKGFADKWHERVLDLAPNIQ 120

Query: 189 ILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPL 242
           + + +GN  ++++ +  +       +  + +    +        VHP         + P 
Sbjct: 121 LTILVGNYAQHYYLHQKSSTKLTDTVKHYRDYLPDY-----FPLVHPSPRNNIWQAKNPW 175

Query: 243 IKKNTWHALITLKKAL 258
            KK     L  L + +
Sbjct: 176 FKKELLPDLKELVQKI 191


>gi|332519364|ref|ZP_08395831.1| Uracil-DNA glycosylase superfamily [Lacinutrix algicola 5H-3-7-4]
 gi|332045212|gb|EGI81405.1| Uracil-DNA glycosylase superfamily [Lacinutrix algicola 5H-3-7-4]
          Length = 190

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 58/163 (35%), Gaps = 16/163 (9%)

Query: 83  LLRSFHDCHLCST----SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDK 138
           LL++   C +C +        +     +   ++IIG  P    + SG P+  ++G  L +
Sbjct: 4   LLKNIKQCDICKSHLPLGPRPVVTA-NKSSKIVIIGQAPGTKVHASGIPWDDQSGKKLRQ 62

Query: 139 ML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFI 193
            L              I  +   +P   +         C      +I    P  K+++ I
Sbjct: 63  WLNVSNKEFYNTKNFAIVPMGFCYPGKGKTGDLPPRPECAKQWHEKILETMPNVKLIILI 122

Query: 194 GNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQ 235
           G   + ++  + A+KT    +  + N    +  IP     HP 
Sbjct: 123 GAYAQKYYLKDKAKKTLTDTVSDYKNYLPKYFPIP-----HPS 160


>gi|19745596|ref|NP_606732.1| hypothetical protein spyM18_0514 [Streptococcus pyogenes MGAS8232]
 gi|19747721|gb|AAL97231.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
          Length = 191

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 54/192 (28%), Gaps = 20/192 (10%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTIC-ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           + +L   + +    +L  T           +   ++I+G  P      +   ++ ++G  
Sbjct: 1   MDDLTKAIMADEA-NLSYTERGIFPLYDAPQTARIIIVGQAPGIVAQETKLYWNDRSGIR 59

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNL-----SNIEMEICRPIIMRQIELISPKIL 190
           L   L           +  I P                 E    +     +  +   ++ 
Sbjct: 60  LRDWLGVDNDTFYHSGLFGIIPMDFYYPGKGKSGDLPPREGFAAKWHPPLRALMPEVELT 119

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKK 245
           + +G   ++F+    A KT     +      P         VHP       L + P    
Sbjct: 120 ILVGRYAQDFYLGKKAYKTLTETVRHFEEYLPD----CFPLVHPSPRNQLWLAKNPW--- 172

Query: 246 NTWHALITLKKA 257
                L+ + + 
Sbjct: 173 -FEQDLLPILQK 183


>gi|319404010|emb|CBI77598.1| conserved hypothetical protein [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 222

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 43/151 (28%), Gaps = 22/151 (14%)

Query: 101 CATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEI------------- 145
                    L+I+G  P     N +G+PF+G   G++L   L+                 
Sbjct: 46  PHKGAATTRLLIVGLAPGLRGANRTGRPFTGDYAGHLLYSTLKKFGFAQGTFAERSDDSL 105

Query: 146 MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FF 202
                 I       PP N+                   L   K ++ +G+   N      
Sbjct: 106 ELIDTAIVNSVRCVPPENKPTGTEINTCRHFFSPLLTNLPQLKAIITLGSIAHNSTLRAL 165

Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
           N          GK S++      +   ++ H
Sbjct: 166 NAKTSAHPFGHGKISDI----GRLRIFSSYH 192


>gi|227486531|ref|ZP_03916847.1| uracil-DNA glycosylase [Anaerococcus lactolyticus ATCC 51172]
 gi|227235487|gb|EEI85502.1| uracil-DNA glycosylase [Anaerococcus lactolyticus ATCC 51172]
          Length = 190

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 65/193 (33%), Gaps = 22/193 (11%)

Query: 80  LKSLLRSFHDCHLCSTS-LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDK 138
           +K L     +  + +   ++ I         ++IIG  P +    +G  F+ K+G  L K
Sbjct: 7   IKKLREDCRN-EIYTNRGINPIF-QLNPKSKILIIGQAPGERVEETGILFNDKSGENLVK 64

Query: 139 MLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE------LISPKILLF 192
            L   E +        I P          + + +  R  I ++        L   K+ + 
Sbjct: 65  WLGISEDVLHSED-FSIIPMDFYYPGKGKSGD-KAPRSFIAKEYHPLLLNELKDIKLTIL 122

Query: 193 IGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKN 246
           IG   + F+  +  +K   + +  +      +         HP       + + P  ++ 
Sbjct: 123 IGAYAQKFYLKDKFKKNLTETVKSYKEFLPEY-----FPIAHPSPLNNRWIAKNPFFREE 177

Query: 247 TWHALITLKKALK 259
               L  + K L+
Sbjct: 178 VLPELKKIVKNLR 190


>gi|241895075|ref|ZP_04782371.1| uracil DNA glycosylase family protein [Weissella paramesenteroides
           ATCC 33313]
 gi|241871793|gb|EER75544.1| uracil DNA glycosylase family protein [Weissella paramesenteroides
           ATCC 33313]
          Length = 195

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 55/167 (32%), Gaps = 19/167 (11%)

Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP--WHPPGN 163
               ++IIG  P      +G PF+ ++G+ L + +                P  ++ PG 
Sbjct: 33  PDVRILIIGQAPGAKVEQTGIPFNDQSGDRLREWMGITSDEFYNSGKVGNLPLDFYFPGK 92

Query: 164 RNL---SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220
                    +    +       ++    +++ +G   + F+      +T   + K     
Sbjct: 93  GKSGDLPPRKGFAEKWHPKMLADMPKVSLIILVGAYAQRFYLPIKKSETMTAVIK----R 148

Query: 221 TPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALI-TLKKALKNL 261
           +       +  VHP       L + P  +      ++  L+  ++ L
Sbjct: 149 SQEFEPKFMPIVHPSPRNNIWLRKNPWFEA----DIVPRLQARVREL 191


>gi|238062761|ref|ZP_04607470.1| uracil-DNA glycosylase superfamily protein [Micromonospora sp. ATCC
           39149]
 gi|237884572|gb|EEP73400.1| uracil-DNA glycosylase superfamily protein [Micromonospora sp. ATCC
           39149]
          Length = 246

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 50/165 (30%), Gaps = 36/165 (21%)

Query: 56  IRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL------------------ 97
           +     P    A   A +A  L +L   +     C                         
Sbjct: 1   MAEARIPDEVVAR--AARATDLVDLDGAVSDCFACPRLVAWREEVARTKRAAFRDQAYWG 58

Query: 98  STICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQSIEIMRTQI----- 150
             +    T    + I+G  P+    N +G+ F+G ++G++L   L    +          
Sbjct: 59  RPVPGFGTSDARIGILGLAPAAHGGNRTGRIFTGDRSGDVLFAALHRAGLANQPTSVAAD 118

Query: 151 --------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP 187
                    I       PP N   +  E + C P + R++ LI P
Sbjct: 119 DGLALRALRIFAAVRCAPPDN-KPTPAERDTCAPWLHREVALIRP 162


>gi|332673497|gb|AEE70314.1| family 4 uracil-DNA glycosylase [Helicobacter pylori 83]
          Length = 209

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 63/191 (32%), Gaps = 14/191 (7%)

Query: 72  QKACSLH-ELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130
            +  SL+ ++   + + + C     S   +         L  I  TP    +      + 
Sbjct: 30  PQNKSLNKQVYEGIENCNLCKRHQNSK-PVIGLFNPTSKLTFITLTP--MLDSQLNFLNN 86

Query: 131 KTGNMLDKMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189
               ML+ ++Q           I  +       N      E+  C   +  Q++  + K+
Sbjct: 87  LKAAMLESIIQKVFNCPLKDCSILSLLKC--DSNSLNLEEEINACLFHLTWQLDNSASKV 144

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH 249
           ++  G        N       ++ G+  +L T H     L+T   +++++ P +KK    
Sbjct: 145 IVVFGEILPKRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALV 197

Query: 250 ALITLKKALKN 260
                 + L  
Sbjct: 198 HFKIALQFLNQ 208


>gi|163868288|ref|YP_001609497.1| hypothetical protein Btr_1130 [Bartonella tribocorum CIP 105476]
 gi|161017944|emb|CAK01502.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
          Length = 209

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 61/189 (32%), Gaps = 21/189 (11%)

Query: 72  QKACSLHELKSLLRSFHDC--------HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123
           ++   + +L+  + S   C         L     + +         + I G  P    + 
Sbjct: 2   KQCSQIIKLEKKIYSCRVCIQQPHYFPPL-PHEPNPVVYLSDT-ASIAIAGQAPGLRVHE 59

Query: 124 SGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR 180
           +  PF+ ++G  L   L   +     ++   +  +    P  ++N +++        I  
Sbjct: 60  TSVPFNDRSGERLRDWLNVRKEEFYNKSLFALVPMGFCFPGYDKNKADLPPRRECREIWH 119

Query: 181 Q---IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGK-WSNL--CTPHSIIPTLATVHP 234
           +     +   K++L IG+  + +       KT     + W N+   +       +   HP
Sbjct: 120 EKIFQAMPQIKLVLAIGSYAQKWHITELKHKTVSATVRDWRNILSISQPRGYNVMPLPHP 179

Query: 235 QELIQYPLI 243
               +    
Sbjct: 180 SW--RNTSW 186


>gi|317014071|gb|ADU81507.1| hypothetical protein HPGAM_03355 [Helicobacter pylori Gambia94/24]
          Length = 196

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 60/184 (32%), Gaps = 13/184 (7%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            ++   + + + C     S   +         +  I  TP    +      +     ML 
Sbjct: 24  KQVHEGIENCNLCKRHQHSK-PVIGLFNPTSKIAFITLTP--MLDSQLHFLNNLKAVMLQ 80

Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++Q           I  +       N      E+  C P ++ Q++  + K+++  G  
Sbjct: 81  SIIQKVFNYPLKDCSILSLLKC--DSNSLNLEEEINACLPHLIWQLDNSASKVIVVFGEI 138

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                 N       ++ G+  +L + H     L+T   +++++ P +KK          +
Sbjct: 139 LPKRLLNLSK---EESFGRIVSLKSKH----FLSTHALEDMLKNPTLKKEALAHFKIALQ 191

Query: 257 ALKN 260
            L  
Sbjct: 192 FLNQ 195


>gi|188580772|ref|YP_001924217.1| Uracil-DNA glycosylase superfamily [Methylobacterium populi BJ001]
 gi|179344270|gb|ACB79682.1| Uracil-DNA glycosylase superfamily [Methylobacterium populi BJ001]
          Length = 220

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 48/173 (27%), Gaps = 19/173 (10%)

Query: 81  KSLLRSFHDCHLCSTSLSTICA-----------TQTEGQDLMIIGYTPSDSDNISGKPFS 129
           ++       C LC  +   +               +    L+I    P +  + SG PFS
Sbjct: 17  EATAARLRACRLCRDA--PLFGAPLPHEPRPVVQGSATARLLIASQAPGNRAHRSGIPFS 74

Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPWHP---PGNRNLSNIEMEICRPIIMRQIE 183
             +G  L   L   ++      ++ I  +    P       +                  
Sbjct: 75  DPSGRRLRAWLGLDEAAFYDSGRVAILPMGACFPGLDAKGGDRPPRRECAPTWRADLLAG 134

Query: 184 LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236
           L    ++L IG   + +          + + +W  +    +    L   HP  
Sbjct: 135 LPRLDLILVIGQYAQAWHLGPRPGGLTETVARWRAILAASARPRVLPLPHPSW 187


>gi|237741843|ref|ZP_04572324.1| DNA polymerase [Fusobacterium sp. 4_1_13]
 gi|229429491|gb|EEO39703.1| DNA polymerase [Fusobacterium sp. 4_1_13]
          Length = 195

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 66/190 (34%), Gaps = 12/190 (6%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             +LK    S  +  L                D++ IG  P        K     +G  L
Sbjct: 8   WEDLKFEAGSIGNELLPKDRQEVYIGMGDRNADVLFIGNDPKLYLAEDYKVEPQSSGAFL 67

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++L  +E +    +I+ I+       +N +  E +    ++  QI LISPKI++F+G +
Sbjct: 68  IRLLDVVEYLPETYYITTITK-REIKIKNFNKEERKKLIDLLFMQILLISPKIVVFLGKE 126

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIKKNTW-----H 249
                  N         G++              T   + +I  +    KK T      +
Sbjct: 127 VAQ-LIENKEIDFDDERGQFKKWRGDVETYL---TYDVETVIKARNDSGKKATIALNFLN 182

Query: 250 ALITLKKALK 259
            +  +K+ L 
Sbjct: 183 DIKNVKERLN 192


>gi|210134857|ref|YP_002301296.1| hypothetical protein HPP12_0663 [Helicobacter pylori P12]
 gi|210132825|gb|ACJ07816.1| hypothetical protein HPP12_0663 [Helicobacter pylori P12]
          Length = 209

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 60/184 (32%), Gaps = 13/184 (7%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            ++   + + + C     S   +         L  I  TP    +      +     ML+
Sbjct: 37  KQVHEGIENCNLCKRHQHSK-PVIGLFNPTSKLAFITLTP--MLDSQLHFLNNLKAAMLE 93

Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++Q           I  +       N      E+  C P +  Q++  + K+++  G  
Sbjct: 94  SIIQKVFNYPLKDCSILSLLKC--DSNSLNLEEEINACLPHLTWQLDNSASKVIVVFGEI 151

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                 N       ++ G+  +L T H     L+T   +++++ P +KK          +
Sbjct: 152 LPRRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFKIALQ 204

Query: 257 ALKN 260
            L  
Sbjct: 205 FLNQ 208


>gi|241765195|ref|ZP_04763180.1| conserved hypothetical protein [Acidovorax delafieldii 2AN]
 gi|241365163|gb|EER60030.1| conserved hypothetical protein [Acidovorax delafieldii 2AN]
          Length = 71

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 23/72 (31%), Gaps = 5/72 (6%)

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTW 248
           ++L +G+               + LG+        +  P + T  P  L++    K + W
Sbjct: 1   MVLVLGHVAARAALGR-----TEPLGRLRADLHQMAGCPAIVTYDPAFLLRSQDTKPSAW 55

Query: 249 HALITLKKALKN 260
             L      +  
Sbjct: 56  ADLCRALALVAA 67


>gi|145593457|ref|YP_001157754.1| uracil-DNA glycosylase superfamily protein [Salinispora tropica
           CNB-440]
 gi|145302794|gb|ABP53376.1| Uracil-DNA glycosylase superfamily [Salinispora tropica CNB-440]
          Length = 253

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 55/191 (28%), Gaps = 42/191 (21%)

Query: 84  LRSFHDCHL--------CSTSL----------STICATQTEGQDLMIIGYTPSDS-DNIS 124
           +     C            T              +         + ++G  P+    N +
Sbjct: 34  ISDCFACPRLVEWREEVARTRRAAFREQEYWGRPVPGFGDPTARIALLGLAPAAHGGNRT 93

Query: 125 GKPFSG-KTGNMLDKMLQ-------------SIEIMRTQIHISMISPWHPPGNRNLSNIE 170
           G+ F+G ++G++L   L                 +      +       PPGN   +  E
Sbjct: 94  GRVFTGDRSGDVLFAALHRAGLANQPTSVAADDGLTLRHTRVFAAVRCAPPGN-KPTPGE 152

Query: 171 MEICRPIIMRQIELISP--KILLFIGNKTKNF----FFNNDAQKTYQNLGKW-SNLCTPH 223
            + C+P + R++ L+ P  ++++ +G                         +        
Sbjct: 153 RDTCQPWLHREVALLRPNLRVVVALGAFAWAAWWPTLHGVYGMPPPSPRPAFTHGAHWSG 212

Query: 224 SIIP-TLATVH 233
           S +P  L   H
Sbjct: 213 SAVPDLLGCYH 223


>gi|254448833|ref|ZP_05062289.1| 1-(5-Phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR)
           carboxylase [gamma proteobacterium HTCC5015]
 gi|198261523|gb|EDY85812.1| 1-(5-Phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR)
           carboxylase [gamma proteobacterium HTCC5015]
          Length = 193

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 58/175 (33%), Gaps = 18/175 (10%)

Query: 80  LKSLLRSFHDCHLCSTSL----STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           L  L++    C LC  +L      +         +++IG  P    + S  P+   +G  
Sbjct: 4   LTQLIQEAERCRLCEAALPEGPRPVF-RAHSNARILVIGQAPGRRVHASAIPWDDPSGER 62

Query: 136 LDKM--LQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL--L 191
           L +   L        ++ I  +   +P    +        C P     +    P I   L
Sbjct: 63  LRRWMALDKTRFYSDRLAILPMGFCYPGTGTSGDLPPRPECAPQWHLPLIAHMPHIELSL 122

Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYP 241
           FIG   +  + +  A+   + + ++           T+A  HP       L + P
Sbjct: 123 FIGQYAQRHYLDQRAKNLTETVRQYEQWLENG----TIALPHPSPRNNRWLSKNP 173


>gi|39935756|ref|NP_948032.1| Uracil-DNA glycosylase superfamily [Rhodopseudomonas palustris
           CGA009]
 gi|39649609|emb|CAE28131.1| possible uracil-DNA glycosylase [Rhodopseudomonas palustris CGA009]
          Length = 224

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 55/194 (28%), Gaps = 26/194 (13%)

Query: 58  HIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117
                 +   D        L E +S +R+         +   + +       L+I+G  P
Sbjct: 10  PRVPTSLTDPDRDCPFCPRLAEFRSEVRARE--PGWFNA--PVPSFGGADASLLIVGLAP 65

Query: 118 SDSD-NISGKPFSGKT-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPG 162
                N +G+PF+G   G++L   L                        IS      PP 
Sbjct: 66  GLQGANRTGRPFTGDYAGDLLYATLIDYGFAQGHYQARPDDGLQLIDCRISNAVRCVPPQ 125

Query: 163 NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSNL 219
           N+ L        R +I     +   + ++ +G    +         A +     G   + 
Sbjct: 126 NKPLPLEINTCRRFLIATIEAMPKLRAIVLLGRIAHDSTLKALGLRAAQAPFGHGAVHDA 185

Query: 220 CTPHSIIPTLATVH 233
                 +    + H
Sbjct: 186 ----GRLRLYDSYH 195


>gi|162147944|ref|YP_001602405.1| uracil DNA glycosylase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786521|emb|CAP56103.1| putative Uracil DNA glycosylase [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 231

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/235 (12%), Positives = 56/235 (23%), Gaps = 26/235 (11%)

Query: 44  KSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHE--LKSLLRSFHDCHLCSTSLSTIC 101
                A+  +       SP              L E  L +               + + 
Sbjct: 2   PPRSRALARLPPHPWSTSPGPDIPPRDCPACPRLVEYRLANQAA-------HPDWWNPVH 54

Query: 102 ATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEIM------------- 146
                   L+I+G  P     N + +PF+G   G +L + L                   
Sbjct: 55  RGARAAHSLLIVGLAPGVKGANRTARPFTGDYAGTLLYETLIEYGFATGRYGADPTDGLV 114

Query: 147 RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206
                I       PP N   ++        +      + + K +L +G    N       
Sbjct: 115 LNDCRIVNAVRCVPPANLPQTSEVRTCNHFLRSELTSMPNLKAVLTLGVVAHNATVAACG 174

Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
               +       + T  + +    + H             T      +   L+ L
Sbjct: 175 IPMSRIRFTHGQVQTLPNGLVLTDSYHVS--RYNTNTGVLTTDMFRAVVARLRAL 227


>gi|34762342|ref|ZP_00143345.1| DNA POLYMERASE, BACTERIOPHAGE-TYPE [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
 gi|27887996|gb|EAA25060.1| DNA POLYMERASE, BACTERIOPHAGE-TYPE [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
          Length = 195

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 66/190 (34%), Gaps = 12/190 (6%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             +LK    S  +  L                D++ IG  P        K     +G  L
Sbjct: 8   WEDLKFEAGSIGNELLPKDRQEVYIGMGDRNADVLFIGNDPKLYLAEDYKVEPQSSGAFL 67

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++L  +E +    +I+ I+       +N +  E +    ++  QI LISPKI++F+G +
Sbjct: 68  IRLLDVVEYLPETYYITTITK-REIKIKNFNKEERKKLIDLLFMQILLISPKIVVFLGKE 126

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI--QYPLIKKNTW-----H 249
                  N         G++              T   + +I  +    KK T      +
Sbjct: 127 VAQ-LIENKEIDFDDERGQFKKWRGNVETYL---TYDVETVIKARNDSGKKATIALNFLN 182

Query: 250 ALITLKKALK 259
            +  +K+ L 
Sbjct: 183 DIKNVKERLN 192


>gi|222112456|ref|YP_002554720.1| phage spo1 DNA polymerase-like protein [Acidovorax ebreus TPSY]
 gi|221731900|gb|ACM34720.1| phage SPO1 DNA polymerase-related protein [Acidovorax ebreus TPSY]
          Length = 257

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 64/199 (32%), Gaps = 22/199 (11%)

Query: 42  KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTS-LSTI 100
            + +  +   P                  A  A +   L++ +       L   +    I
Sbjct: 55  AQPTPAAPSAPRQPAHAAAPAAPASEPRTAGAAPTGLLLRAPVA------LYPQADPQAI 108

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHP 160
                 G   +++  +P+ ++     P +G +G +LD ML+++ + R           H 
Sbjct: 109 PPE--LGAGWLVVLESPTPAE-----PLAGDSGRLLDNMLRAMRLHRHPRTFVATLNRHA 161

Query: 161 PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220
           PG       E       + + ++ + P ++L +G         +      +      +L 
Sbjct: 162 PG----LTAEGLEPAAGLQQALQTLRPSLVLVLGLGAARVVLGSREPL-GRLRATAHHLP 216

Query: 221 TPHSIIPTLATVHPQELIQ 239
                 P + +  P  L++
Sbjct: 217 ---DGTPAVVSYDPAYLLR 232


>gi|320527954|ref|ZP_08029120.1| uracil DNA glycosylase family protein [Solobacterium moorei F0204]
 gi|320131580|gb|EFW24144.1| uracil DNA glycosylase family protein [Solobacterium moorei F0204]
          Length = 191

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 57/166 (34%), Gaps = 16/166 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML--QSIEIMRTQIHISMISPWHPPG 162
                ++IIG  P      SG PF  ++G  L K +     E     I I  +  ++P  
Sbjct: 31  DANAKILIIGQAPGSHVERSGIPFDDQSGIRLRKWMGIDDKEFYSKDIAILPMDFYYPGK 90

Query: 163 NRNL--SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNL 219
            +       +             + + ++ L +G  + +++     +K   + +  +   
Sbjct: 91  AKTGDLPPRKFIAQEYHEKFLKLMPNIELTLLVGKYSIDYYLGKKKKKNLTETVENFQEY 150

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKALK 259
              +        VHP       L + P  ++ T   L   +++ LK
Sbjct: 151 LPKY-----FPIVHPSPLNFRWLGKNPWFEEKTVKELQKRVRQILK 191


>gi|317012467|gb|ADU83075.1| hypothetical protein HPLT_03245 [Helicobacter pylori Lithuania75]
          Length = 192

 Score = 53.2 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 60/184 (32%), Gaps = 13/184 (7%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            ++   + + + C     S   +         L  I  TP    +      +     ML+
Sbjct: 20  KQVHESIENCNLCKRHQHSK-PVIGLFNPTSKLAFITLTP--MLDSQLHFLNNLKAAMLE 76

Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++Q           I  +       N      E+  C P +  Q++  + K+++  G  
Sbjct: 77  SIIQKVFNYPLKDCSILSLLKC--DSNSLNLEEEINACLPHLTWQLDNSASKVIVVFGEI 134

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                 N       ++ G+  +L T H     L+T   +++++ P +KK          +
Sbjct: 135 LPKRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALVHFKIALQ 187

Query: 257 ALKN 260
            L  
Sbjct: 188 FLNQ 191


>gi|222111888|ref|YP_002554152.1| uracil-DNA glycosylase superfamily [Acidovorax ebreus TPSY]
 gi|221731332|gb|ACM34152.1| Uracil-DNA glycosylase superfamily [Acidovorax ebreus TPSY]
          Length = 221

 Score = 53.2 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 59/208 (28%), Gaps = 13/208 (6%)

Query: 48  SAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC-HLCSTSLSTICATQTE 106
            A  P   +     P         ++   L  L   +R+   C          +      
Sbjct: 1   MAKPPRNELPGHALPRNGLPRDDTRRDEPLDALLRRVRACTICAPYLPLGPRPVL-QADA 59

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGN 163
              L+I+G  P    + SG PF   +G  L   L   +       ++ I  +   +P   
Sbjct: 60  RARLLIVGQAPGRKVHASGIPFDDASGERLRTWLGLTRETFYDPARVAIVPMGFCYPGRG 119

Query: 164 RNLSNIEMEICRPIIMRQIELISPKI--LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221
            +        C P     +    P I   + +G     +          Q LG+      
Sbjct: 120 ASGDAPPRPECAPAWRVPLLARLPNIALTVAVGQYALAWHLA---ACRGQPLGETVRSTC 176

Query: 222 PHSIIPTLATVHPQELIQYPLI-KKNTW 248
                P LA  HP    +     K++ W
Sbjct: 177 TLPDAPVLALPHPSP--RNNGWLKRHPW 202


>gi|330993466|ref|ZP_08317401.1| hypothetical protein SXCC_03365 [Gluconacetobacter sp. SXCC-1]
 gi|329759496|gb|EGG76005.1| hypothetical protein SXCC_03365 [Gluconacetobacter sp. SXCC-1]
          Length = 205

 Score = 53.2 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 54/192 (28%), Gaps = 39/192 (20%)

Query: 74  ACSLHELKSLLRSFHDCH----------LCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123
           A +L +L   +R+   C           L  +              L+I    P    + 
Sbjct: 2   AETLQDLLDAIRACQTCAAHLPLGPRPVLHVSRT----------ARLLIASQAPGTRVHE 51

Query: 124 SGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP---WHP-----PGNRNLSNIEMEICR 175
           +G+ F+  +G+ L   +              + P    +P      G+           R
Sbjct: 52  TGQSFNDASGDRLRGWMGIDRATFYDSSRIALVPMGLCYPGRLPQGGDCPPRPECAPQWR 111

Query: 176 PIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
             IM Q+  I  ++ L +G+  +            +       L     +       HP 
Sbjct: 112 ARIMAQMPDI--RLTLVVGSYAQQHILG-------KGRVSERCLDFRRYLPRYFPLPHPS 162

Query: 236 ELIQYPLIKKNT 247
              +    ++ T
Sbjct: 163 W--RTGAWERRT 172


>gi|13476433|ref|NP_108003.1| hypothetical protein mll7751 [Mesorhizobium loti MAFF303099]
 gi|14027194|dbj|BAB54148.1| mll7751 [Mesorhizobium loti MAFF303099]
          Length = 218

 Score = 53.2 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 44/151 (29%), Gaps = 22/151 (14%)

Query: 101 CATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEIMRTQI-------- 150
                +   L+I+G  P     N +G+PF+G   G++L   L +    R +         
Sbjct: 43  PPQGEDTVQLLIVGLAPGLRGANRTGRPFTGDYAGDLLYSTLIAHGFARGEFKARPDDGL 102

Query: 151 -----HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FF 202
                 I+      PP N+ +          ++         + +L +G+          
Sbjct: 103 ELVGTAITNAVRCVPPENKPVGAEIATCRTFLVPTIARFPKLRAVLALGSIAHQSTVRAL 162

Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
                      G       P   I   ++ H
Sbjct: 163 GGRVAAYPFKHG----GQLPAGGIALFSSYH 189


>gi|308184438|ref|YP_003928571.1| hypothetical protein HPSJM_03310 [Helicobacter pylori SJM180]
 gi|308060358|gb|ADO02254.1| hypothetical protein HPSJM_03310 [Helicobacter pylori SJM180]
          Length = 192

 Score = 53.2 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 61/184 (33%), Gaps = 13/184 (7%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            ++   + + + C     S   +         L  I  TP    +      +     ML+
Sbjct: 20  KQVHEGIENCNLCKRHQHSK-PVIGLFNPTSKLAFITLTP--MLDSQLHFLNNLKAAMLE 76

Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++Q          +I  +       N      E+  C P +  Q++  + K+++  G  
Sbjct: 77  SIIQKVFNYPLKDCNILSLLKC--DSNSLNLEEEINACLPHLTWQLDNSASKVIVVFGEI 134

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                 N       ++ G+  +L T H     L+T   +++++ P +KK          +
Sbjct: 135 LPKRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALVHFKIALQ 187

Query: 257 ALKN 260
            L  
Sbjct: 188 FLNQ 191


>gi|163759714|ref|ZP_02166799.1| probable uracil-DNA glycosylase protein [Hoeflea phototrophica
           DFL-43]
 gi|162283311|gb|EDQ33597.1| probable uracil-DNA glycosylase protein [Hoeflea phototrophica
           DFL-43]
          Length = 219

 Score = 53.2 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 56/195 (28%), Gaps = 21/195 (10%)

Query: 72  QKACSLHELKSLLRSFHDC---HLCSTSLSTICATQTEGQ------DLMIIGYTPSDSDN 122
                +  L + + +   C    L   +   +               ++I G  P    +
Sbjct: 8   AGCEDISALVAEISACTVCRDAPLGGPAK-ALPHDPRPVCVASATAPVLIAGQAPGTRVH 66

Query: 123 ISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHP---PGNRNLSNIEMEICRP 176
            SG+PF+  +G+ L + L   ++         I  +    P       +L          
Sbjct: 67  ASGRPFTDPSGDRLRQWLGVDEAQFYNPANFAIVPMGFCFPGLDAKGGDLPPRRECAPAW 126

Query: 177 IIMRQIELISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSI-IPTLATVHP 234
                  +   +++L IG   + +       +   Q +  W  +          L   HP
Sbjct: 127 RDRLMASMPQVRLILAIGQYAQAWHLGGMRRKSLTQTVADWRVILDATRSDCAVLPLPHP 186

Query: 235 QELIQYPLI-KKNTW 248
               +     +KN W
Sbjct: 187 SW--RNSGWIRKNPW 199


>gi|89056143|ref|YP_511594.1| uracil-DNA glycosylase superfamily protein [Jannaschia sp. CCS1]
 gi|88865692|gb|ABD56569.1| Uracil-DNA glycosylase superfamily [Jannaschia sp. CCS1]
          Length = 194

 Score = 53.2 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 61/197 (30%), Gaps = 25/197 (12%)

Query: 80  LKSLLRSFHDCHLC------STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
           L   + +   C           +   +      G  +++ G  P    + SG+PF+  +G
Sbjct: 3   LAQDIAACQICADRFAQTYPGHAPRPVVWF-RPGARILVAGQAPGMRVHRSGQPFTDPSG 61

Query: 134 NMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR---QIELISP 187
           + L   +   +     + ++ I  ++   P  +   +++          R      L   
Sbjct: 62  DRLRDWMGVDEKTFYDKDRVAILPMAFCFPGYDAKGADLPPPKICARTWRGPLLDALGRV 121

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKN 246
           ++ L +G   + +   +    T +    W +              HP    +     K++
Sbjct: 122 RLTLLVGGYAQGWHLGDKTTVTARV-EAWRDHAPA-----VFPLPHPSW--RNTGWLKRH 173

Query: 247 TW---HALITLKKALKN 260
            W     L  L+  +  
Sbjct: 174 PWFEAELLPVLRARVAE 190


>gi|162451252|ref|YP_001613619.1| hypothetical protein sce2980 [Sorangium cellulosum 'So ce 56']
 gi|161161834|emb|CAN93139.1| hypothetical protein sce2980 [Sorangium cellulosum 'So ce 56']
          Length = 277

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 53/163 (32%), Gaps = 35/163 (21%)

Query: 73  KACSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLMIIG 114
            A +L  + + L     C                           + A       L+I+G
Sbjct: 6   AARALDLITAELVECRRCPRLVAWREDVAREKRRAYRDQTYWGRPVPAFGDPDAPLVIVG 65

Query: 115 YTPSDS-DNISGKPFSG-KTGNMLDKML-------------QSIEIMRTQIHISMISPWH 159
             P+    N +G+ F+G ++G+ L   L             +   +    + I+      
Sbjct: 66  LAPAAHGGNRTGRMFTGDRSGDFLYAALYRAGLASQPTSTSRDDGLSLRGVFITAPCRCA 125

Query: 160 PPGNRNLSNIEMEICRPIIMRQIEL-ISPKILLFIGNKTKNFF 201
           PP N   +  E+  CR  I R++ +    ++ L +G    +  
Sbjct: 126 PPDN-KPTIAELAACRGWIDRELAVLHRARVYLALGKIGYDAV 167


>gi|86749723|ref|YP_486219.1| uracil-DNA glycosylase superfamily protein [Rhodopseudomonas
           palustris HaA2]
 gi|86572751|gb|ABD07308.1| Uracil-DNA glycosylase superfamily [Rhodopseudomonas palustris
           HaA2]
          Length = 200

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 51/178 (28%), Gaps = 26/178 (14%)

Query: 74  ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT 132
              L E +  LR+         +   + +       L+I+G  P     N +G+PF+G  
Sbjct: 2   CPRLAEFRHELRARE--PGWHNA--PVPSFGDADAALLIVGLAPGVQGANRTGRPFTGDY 57

Query: 133 -GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPII 178
            G++L   L                        IS      PP N+ L        R + 
Sbjct: 58  AGDLLYATLIDYGFATGQFQARPDDGLRLVGCRISNAVRCVPPQNKPLPVEINTCRRFLA 117

Query: 179 MRQIELISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
                +   + ++ +G    +         A +     G   +       +    + H
Sbjct: 118 ATIETMPKLRAIVLLGRIAHDSTLKALGLRASQAPFGHGAVHDA----GALRLYDSYH 171


>gi|320533725|ref|ZP_08034337.1| conserved domain protein [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320134059|gb|EFW26395.1| conserved domain protein [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 151

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 12/124 (9%), Positives = 31/124 (25%), Gaps = 21/124 (16%)

Query: 42  KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL---- 97
                              +        +A  +  L  L + +     C           
Sbjct: 15  PVPPGTGWPDDPATATTPMARSASDVAHLAGASSDLPALDARITVCRACDRLVAWREEVA 74

Query: 98  ---------------STICATQTEGQDLMIIGYTPSDSD-NISGKPFSG-KTGNMLDKML 140
                            + +  +    + ++G  P+ +  N +G+ F+G ++G+ L    
Sbjct: 75  RTGRRASFAHEPYWGRPVASVGSADARIYVVGLAPAANGANRTGRMFTGDRSGDWLWAAF 134

Query: 141 QSIE 144
               
Sbjct: 135 HRAG 138


>gi|325478629|gb|EGC81741.1| uracil-DNA glycosylase family protein [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 190

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 64/178 (35%), Gaps = 19/178 (10%)

Query: 94  STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML--QSIEIMRTQIH 151
            +    I     +   ++IIG  P      +G  F  K+G+ L   L  +   + R +  
Sbjct: 21  KSGKEPIF-QLNKSSKILIIGQAPGKKVEETGILFDDKSGDKLVNWLGIEKDTLYRKEFS 79

Query: 152 ISMISPWHPPGNRNLS--NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209
           I  +  ++P   +       +        +   EL + ++ + +G   + ++  ++ +K 
Sbjct: 80  IIPMDFYYPGKAKTGDKAPRKFIANEYHSILLKELSNIELTILVGAHAQKYYLKDNFKKN 139

Query: 210 -YQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKNL 261
             Q +  +      +        +HP       L + P  ++     +  L+K + N+
Sbjct: 140 LTQTVKSFEEYLPEY-----FPIIHPSPLNNRWLSKNPFFEEKV---VPELRKRVNNI 189


>gi|94988018|ref|YP_596119.1| uracil DNA glycosylase superfamily protein [Streptococcus pyogenes
           MGAS9429]
 gi|94991904|ref|YP_600003.1| Uracil DNA glycosylase superfamily protein [Streptococcus pyogenes
           MGAS2096]
 gi|139474290|ref|YP_001129006.1| uracil DNA glycosylase superfamily protein [Streptococcus pyogenes
           str. Manfredo]
 gi|94541526|gb|ABF31575.1| uracil DNA glycosylase superfamily protein [Streptococcus pyogenes
           MGAS9429]
 gi|94545412|gb|ABF35459.1| Uracil DNA glycosylase superfamily protein [Streptococcus pyogenes
           MGAS2096]
 gi|134272537|emb|CAM30802.1| uracil DNA glycosylase superfamily protein [Streptococcus pyogenes
           str. Manfredo]
          Length = 191

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 55/192 (28%), Gaps = 20/192 (10%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTIC-ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           + +L   + +    +L  T           +   ++I+G  P      +   ++ ++G  
Sbjct: 1   MDDLTKAIMADEA-NLSYTERGIFPLYDAPQTARIIIVGQAPGIVAQETKLYWNDRSGIR 59

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNL-----SNIEMEICRPIIMRQIELISPKIL 190
           L   L           +  I P                 E    +     +  +   ++ 
Sbjct: 60  LRDWLGVDNDTFYHSGLFGIIPMDFYYPGKGKSGDLPPREGFAAKWHPPLRALMPEVELT 119

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKK 245
           + +G   ++F+  N A KT     +      P         VHP       L + P    
Sbjct: 120 ILVGRYAQDFYLGNKAYKTLTETVRHFEEYLPDY----FPLVHPSPRNQLWLAKNPW--- 172

Query: 246 NTWHALITLKKA 257
                L+ + + 
Sbjct: 173 -FEQDLLPILQK 183


>gi|329117012|ref|ZP_08245729.1| uracil-DNA glycosylase family protein [Streptococcus parauberis
           NCFD 2020]
 gi|326907417|gb|EGE54331.1| uracil-DNA glycosylase family protein [Streptococcus parauberis
           NCFD 2020]
          Length = 191

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 55/166 (33%), Gaps = 15/166 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   ++I+G  P      +   ++ ++G  L + L           +  I P       
Sbjct: 29  PKTAKIVIVGQAPGIIAQETKIYWNDRSGIRLREWLDVDNDTFYNSGLFGIIPMDFYYPG 88

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                          +        + + ++++ +G   +  +   +++KT     +    
Sbjct: 89  KGKSGDLPPRNGFADKWHQKILKTMPNVELIILVGQYAQKHYLGKESKKTLTETVRSFEE 148

Query: 220 CTPHSIIPTLATVHPQELIQYPLI-KKNTW-HA--LITLKKALKNL 261
             P+        VHP    +  +  KKN+W     + TL+K +  +
Sbjct: 149 YLPNY----FPLVHPSP--RNQIWMKKNSWFQDQVIPTLQKRVAEI 188


>gi|27380179|ref|NP_771708.1| hypothetical protein blr5068 [Bradyrhizobium japonicum USDA 110]
 gi|27353333|dbj|BAC50333.1| blr5068 [Bradyrhizobium japonicum USDA 110]
          Length = 224

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 48/177 (27%), Gaps = 33/177 (18%)

Query: 88  HDCHLCS--------------TSLS-TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131
            DC LC               +  +  +         L+I+G  P     N +G+PF+G 
Sbjct: 22  RDCPLCPRLVAFREANRAREPSWHNAPVAPFGDVKARLLIVGLAPGMQGANRTGRPFTGD 81

Query: 132 T-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177
             G++L   L                        I+      PP N+ L        + +
Sbjct: 82  YAGDLLYATLLEYGFAKGAYQARPDDGLKLVDCRIANAVHCVPPQNKPLPAEINTCRQFL 141

Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQ-NLGKWSNLCTPHSIIPTLATVH 233
                 + + + ++ +G    +        K  Q   G                + H
Sbjct: 142 AANLATMPNLRAIVALGRIAHDTVLKPLNLKGSQAPFG--HGAVHQAGAFRLYDSYH 196


>gi|322371383|ref|ZP_08045933.1| hypothetical protein ZOD2009_17845 [Haladaptatus paucihalophilus
           DX253]
 gi|320549051|gb|EFW90715.1| hypothetical protein ZOD2009_17845 [Haladaptatus paucihalophilus
           DX253]
          Length = 198

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 44/144 (30%), Gaps = 17/144 (11%)

Query: 101 CATQTEGQDLMIIGYTPSDSDNIS-GKPFS-GKTGNMLDKMLQSIEIMRTQI-------- 150
                   D  +IG  P     I    PF+ G  G  L  +L  + ++            
Sbjct: 2   FGYGDANADFHLIGDHPGAHGGIESNVPFTGGPVGETLQPVLNEVGLIGDVYSDRPTIAN 61

Query: 151 -HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209
             +S +     P  R  +  E +        ++  I+  +LL +G       F     + 
Sbjct: 62  LFMSYLHMCRLPDGRQPTPREYDDMERFFDAELRAIAAHVLLPVGRTATEHVFWEFTAQA 121

Query: 210 YQNLGKWSNLCTPHSIIPTLATVH 233
            +       +       P +AT+H
Sbjct: 122 EK-----HGIGDGRDG-PDMATLH 139


>gi|48478061|ref|YP_023767.1| uracil-DNA glycosylase [Picrophilus torridus DSM 9790]
 gi|48430709|gb|AAT43574.1| uracil-DNA glycosylase [Picrophilus torridus DSM 9790]
          Length = 218

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 63/214 (29%), Gaps = 38/214 (17%)

Query: 82  SLLRSFHDCHLC---------------STSLSTICATQTEGQDLMIIGYTPSDS-DNISG 125
             +     C                        I         L+IIG  P+    N +G
Sbjct: 4   DEIIGCTKCDRLIKYREFVEKHKKYNEEYWSRPITGYGDINGRLLIIGLAPAAHGGNRTG 63

Query: 126 KPFSGKT-GNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLSNIEM 171
           + F+G    + L   L             +   ++    +I++     PP N+ L     
Sbjct: 64  RIFTGDKSSDFLVSSLYSAGITNQPESRSRDDGLIYIDSYITLALKCAPPENKPLKCELK 123

Query: 172 EICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLG-KWSNLCTPH-SIIPTL 229
                +      +++ + +L +G    + + N    +       K+ N      + I   
Sbjct: 124 NCSFFLFNEIRSMVNLRAVLVLGRIAFDSYINYLKTENVDTKNIKFKNFAYYDINNIRLY 183

Query: 230 ATVHPQELIQYPL----IKKNTWHALITLKKALK 259
            + HP    +        K +  + LI+++  + 
Sbjct: 184 CSYHPSP--RNVNTGLLKKDDFVNFLISIRSYIN 215


>gi|159900217|ref|YP_001546464.1| uracil-DNA glycosylase superfamily protein [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159893256|gb|ABX06336.1| uracil-DNA glycosylase superfamily [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 193

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/163 (13%), Positives = 52/163 (31%), Gaps = 14/163 (8%)

Query: 83  LLRSFHDCHLCSTSLS-TICATQTEGQDLMIIGYTP-SDSDNISGKPFSGKT-GNMLDKM 139
           L  +   C       +  +         +M +G  P S   N +G P++    G  L  +
Sbjct: 7   LATACFKCWRRVQERNCIVHGYGDANAKVMFVGEVPESLGANQTGVPWTRTIAGQRLQVL 66

Query: 140 LQSIEI-----------MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188
           L+++ +                +++ +       +   + +E   C   + R++ L++P+
Sbjct: 67  LRALRLRTASDPEHEEPRLVGAYLTYLVRCSTHADSPPTMVETSNCVAYLWRELVLVNPR 126

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231
           I++ +G                 N+        P      L  
Sbjct: 127 IIVTVGEAPTRLMCAKLFGHVPGNVESMHAQPLPVDQRILLPM 169


>gi|114706253|ref|ZP_01439155.1| hypothetical protein FP2506_00675 [Fulvimarina pelagi HTCC2506]
 gi|114538114|gb|EAU41236.1| hypothetical protein FP2506_00675 [Fulvimarina pelagi HTCC2506]
          Length = 200

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 41/143 (28%), Gaps = 22/143 (15%)

Query: 109 DLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEI-------------MRTQIHIS 153
            L+I+G  P     N +G+PF+G   G++L   L                     +  ++
Sbjct: 32  RLLIVGLAPGVRGANRTGRPFTGDYAGDLLYATLHRHGFANDRFAADPNDGLKLFETAVT 91

Query: 154 MISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FFNNDAQKTY 210
                 PP N+ +        R +      L + + ++ +G    +          +   
Sbjct: 92  NSVRCVPPQNKPVGEEINTCRRFLSATITALPNLRAIVTLGRIAHDSTVRTLGLKLKDHA 151

Query: 211 QNLGKWSNLCTPHSIIPTLATVH 233
              G                T H
Sbjct: 152 FGHG----AQIEARRYTLFPTYH 170


>gi|319898965|ref|YP_004159058.1| hypothetical protein BARCL_0799 [Bartonella clarridgeiae 73]
 gi|319402929|emb|CBI76480.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
          Length = 211

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 59/184 (32%), Gaps = 17/184 (9%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTE------GQDLMIIGYTPSDSDNISG 125
           Q+   + +L+  + S   C      L  +               + I G  P    + S 
Sbjct: 4   QQCDHIIKLEKDIHSCRVCIKHPHYLPPLPHEPRPIVYLSNTASIAIAGQAPGLRVHESF 63

Query: 126 KPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ- 181
            PF+ ++G  L   L         R+   I  +    P  ++N S++        I  + 
Sbjct: 64  IPFNDRSGIRLRNWLGVTNDEFYNRSLFAIVPMGFCFPGYDQNKSDLPPRSECREIWHEK 123

Query: 182 --IELISPKILLFIGNKTKNFFFNN-DAQKTYQNLGKWSNLCT--PHSIIPTLATVHPQE 236
               +   K++L IG+  + +   N   +     +  W N+ +         +   HP  
Sbjct: 124 VFQAMPQIKLVLAIGSYAQKWHIANLKHKTVSATVSDWKNILSTRQPRGYNVMPLPHPSW 183

Query: 237 LIQY 240
             + 
Sbjct: 184 --RN 185


>gi|319784513|ref|YP_004143989.1| uracil-DNA glycosylase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317170401|gb|ADV13939.1| Uracil-DNA glycosylase superfamily [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 218

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 44/151 (29%), Gaps = 22/151 (14%)

Query: 101 CATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEIMRTQI-------- 150
                    L+I+G  P     N +G+PF+G   G+ML   + S    R +         
Sbjct: 43  PPEGDAAVQLLIVGLAPGLRGANRTGRPFTGDYAGDMLYSTMISHGFARGEFKARPDDGL 102

Query: 151 -----HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FF 202
                 I+      PP N+ +          ++       + + +L +G+          
Sbjct: 103 ELVGTAITNAVRCVPPENKPVGAEIATCRTFLVPTIARFPNLRAVLALGSIAHQSTVRAL 162

Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
                      G       P   I   ++ H
Sbjct: 163 GGRVAAYPFKHG----GQLPAGSITLFSSYH 189


>gi|21909870|ref|NP_664138.1| hypothetical protein SpyM3_0334 [Streptococcus pyogenes MGAS315]
 gi|28896435|ref|NP_802785.1| hypothetical protein SPs1523 [Streptococcus pyogenes SSI-1]
 gi|50913758|ref|YP_059730.1| Uracil DNA glycosylase superfamily protein [Streptococcus pyogenes
           MGAS10394]
 gi|56808801|ref|ZP_00366515.1| COG1573: Uracil-DNA glycosylase [Streptococcus pyogenes M49 591]
 gi|94989897|ref|YP_597997.1| Uracil DNA glycosylase superfamily protein [Streptococcus pyogenes
           MGAS10270]
 gi|94993782|ref|YP_601880.1| uracil DNA glycosylase [Streptococcus pyogenes MGAS10750]
 gi|209558956|ref|YP_002285428.1| hypothetical protein Spy49_0400 [Streptococcus pyogenes NZ131]
 gi|21904057|gb|AAM78941.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315]
 gi|28811686|dbj|BAC64618.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
 gi|50902832|gb|AAT86547.1| Uracil DNA glycosylase superfamily protein [Streptococcus pyogenes
           MGAS10394]
 gi|94543405|gb|ABF33453.1| Uracil DNA glycosylase superfamily protein [Streptococcus pyogenes
           MGAS10270]
 gi|94547290|gb|ABF37336.1| Uracil DNA glycosylase superfamily protein [Streptococcus pyogenes
           MGAS10750]
 gi|209540157|gb|ACI60733.1| hypothetical protein Spy49_0400 [Streptococcus pyogenes NZ131]
          Length = 191

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 55/192 (28%), Gaps = 20/192 (10%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTIC-ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           + +L   + +    +L  T           +   ++I+G  P      +   ++ ++G  
Sbjct: 1   MDDLTKAIMADEA-NLSYTERGIFPLYDAPQTARIIIVGQAPGIVAQETKLYWNDRSGIR 59

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNL-----SNIEMEICRPIIMRQIELISPKIL 190
           L   L           +  I P                 E    +     +  +   ++ 
Sbjct: 60  LRDWLGVDNDTFYHSGLFGIIPMDFYYPGKGKSGDLPPREGFAAKWHPPLRALMPEVELT 119

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKK 245
           + +G   ++F+  N A KT     +      P         VHP       L + P    
Sbjct: 120 ILVGRYAQDFYLGNKAYKTLTETVRHFEDYLPDY----FPLVHPSPRNQLWLAKNPW--- 172

Query: 246 NTWHALITLKKA 257
                L+ + + 
Sbjct: 173 -FEQDLLPILQK 183


>gi|302865405|ref|YP_003834042.1| Uracil-DNA glycosylase superfamily [Micromonospora aurantiaca ATCC
           27029]
 gi|302568264|gb|ADL44466.1| Uracil-DNA glycosylase superfamily [Micromonospora aurantiaca ATCC
           27029]
          Length = 237

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 51/161 (31%), Gaps = 28/161 (17%)

Query: 98  STICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQ-------------S 142
             +         + I+G  P+    N +G+ F+G ++G++L   L               
Sbjct: 50  RPVPGLGPADARIAILGLAPAAHGGNRTGRIFTGDRSGDVLFAALHRAGLANQPTSVSAD 109

Query: 143 IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNF 200
             +      I       PP N   +  E + C P + R++ELI P  ++++ +G      
Sbjct: 110 DGLTLRDTRIFAAVRCAPPDN-KPTPDERDTCAPWLHREVELIRPTLRVVVALGAFAWAA 168

Query: 201 -------FFNNDAQKTYQNLGKWSNLCTPHSIIP-TLATVH 233
                   +           G           +P  L   H
Sbjct: 169 WWPVLRQVYGQRPPTPRPVFG--HGAHWSGESVPALLGCYH 207


>gi|218529772|ref|YP_002420588.1| uracil-DNA glycosylase superfamily [Methylobacterium
           chloromethanicum CM4]
 gi|218522075|gb|ACK82660.1| Uracil-DNA glycosylase superfamily [Methylobacterium
           chloromethanicum CM4]
          Length = 220

 Score = 52.4 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 51/182 (28%), Gaps = 16/182 (8%)

Query: 69  SIAQKACSLHELKSLLRSFHDC--------HLCSTSLSTICATQTEGQDLMIIGYTPSDS 120
           +++    +     + LR+   C         L       +    +    L+I    P + 
Sbjct: 8   AMSAAPENFEATAARLRACRLCRDAPLYGAPLPHEPRPVV--QGSATARLLIASQAPGNR 65

Query: 121 DNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHP---PGNRNLSNIEMEIC 174
            + SG PFS  +G  L   L   +       ++ I  +    P       +         
Sbjct: 66  AHRSGIPFSDPSGRRLRAWLGLDEVAFYDPARVAILPMGACFPGLDAKGGDRPPRRECAP 125

Query: 175 RPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHP 234
                    L    ++L IG   + +          + + +W  +    +    L   HP
Sbjct: 126 TWRADLLAGLPQLDLILVIGQYAQAWHLGPRPGGLTETVARWRAILDASARPRVLPLPHP 185

Query: 235 QE 236
             
Sbjct: 186 SW 187


>gi|167850917|ref|ZP_02476425.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei
           B7210]
          Length = 175

 Score = 52.4 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 56/167 (33%), Gaps = 17/167 (10%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPP 161
             G  ++I+G  P    + SG P+   +G  L   L    +     +   I  +   +P 
Sbjct: 4   HPGARILIVGQAPGARVHASGIPWDDASGKRLRAWLNVNDATFYDESLFAIVPMGFCYPG 63

Query: 162 GNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQKT-YQNLGKWSN 218
              +  N     C P+ + ++    P  ++ L IG   +  F     + T  + +  W  
Sbjct: 64  RGASGDNPPRPECAPLWLDKLLAELPDIRLTLLIGQYAQRRFLGARRKSTLTETVRAWPE 123

Query: 219 LCTPHSIIPTLATVHPQELIQYPLI-KKNTWHA---LITLKKALKNL 261
                     +   HP    +     K++ W     L  L+  +  L
Sbjct: 124 YAPEF-----IPLPHPSP--RNQGWLKQHPWFDADVLPALRDRVAEL 163


>gi|15674589|ref|NP_268763.1| hypothetical protein SPy_0472 [Streptococcus pyogenes M1 GAS]
 gi|71910200|ref|YP_281750.1| uracil DNA glycosylase superfamily protein [Streptococcus pyogenes
           MGAS5005]
 gi|13621698|gb|AAK33484.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
 gi|71852982|gb|AAZ51005.1| uracil DNA glycosylase superfamily protein [Streptococcus pyogenes
           MGAS5005]
          Length = 191

 Score = 52.4 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 55/192 (28%), Gaps = 20/192 (10%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTIC-ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           + +L   + +    +L  T           +   ++I+G  P      +   ++ ++G  
Sbjct: 1   MDDLTKAIMADEA-NLSYTERGIFPLYDAPQTARIIIVGQAPGIVAQGTKLYWNDRSGIR 59

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNL-----SNIEMEICRPIIMRQIELISPKIL 190
           L   L           +  I P                 E    +     +  +   ++ 
Sbjct: 60  LRDWLGVDNDTFYHSGLFGIIPMDFYYPGKGKSGDLPPREGFAAKWHPPLRALMPEVELT 119

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKK 245
           + +G   ++F+  N A KT     +      P         VHP       L + P    
Sbjct: 120 ILVGRYAQDFYLGNKAYKTLTETVRHFEDYLPDY----FPLVHPSPRNQLWLAKNPW--- 172

Query: 246 NTWHALITLKKA 257
                L+ + + 
Sbjct: 173 -FEQDLLPILQK 183


>gi|167724951|ref|ZP_02408187.1| uracil-DNA glycosylase [Burkholderia pseudomallei DM98]
 gi|167743892|ref|ZP_02416666.1| uracil-DNA glycosylase [Burkholderia pseudomallei 14]
 gi|167821077|ref|ZP_02452757.1| uracil-DNA glycosylase [Burkholderia pseudomallei 91]
 gi|167829438|ref|ZP_02460909.1| uracil-DNA glycosylase [Burkholderia pseudomallei 9]
 gi|167899517|ref|ZP_02486918.1| uracil-DNA glycosylase [Burkholderia pseudomallei 7894]
 gi|167907834|ref|ZP_02495039.1| uracil-DNA glycosylase [Burkholderia pseudomallei NCTC 13177]
 gi|167916193|ref|ZP_02503284.1| uracil-DNA glycosylase [Burkholderia pseudomallei 112]
 gi|167924030|ref|ZP_02511121.1| uracil-DNA glycosylase [Burkholderia pseudomallei BCC215]
 gi|226196951|ref|ZP_03792529.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|225930934|gb|EEH26943.1| Uracil DNA glycosylase family protein [Burkholderia pseudomallei
           Pakistan 9]
          Length = 175

 Score = 52.4 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 56/167 (33%), Gaps = 17/167 (10%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPP 161
             G  ++I+G  P    + SG P+   +G  L   L    +     +   I  +   +P 
Sbjct: 4   HPGARILIVGQAPGARVHASGIPWDDASGKRLRAWLNVDDATFYDESLFAIVPMGFCYPG 63

Query: 162 GNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQKT-YQNLGKWSN 218
              +  N     C P+ + ++    P  ++ L IG   +  F     + T  + +  W  
Sbjct: 64  RGASGDNPPRPECAPLWLDKLLAELPDIRLTLLIGQYAQRRFLGARRKSTLTETVRAWPE 123

Query: 219 LCTPHSIIPTLATVHPQELIQYPLI-KKNTWHA---LITLKKALKNL 261
                     +   HP    +     K++ W     L  L+  +  L
Sbjct: 124 YAPEF-----IPLPHPSP--RNQGWLKQHPWFDADVLPALRDRVAEL 163


>gi|148256039|ref|YP_001240624.1| putative uracil-DNA glycosylase [Bradyrhizobium sp. BTAi1]
 gi|146408212|gb|ABQ36718.1| putative uracil-DNA glycosylase [Bradyrhizobium sp. BTAi1]
          Length = 229

 Score = 52.4 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 46/176 (26%), Gaps = 31/176 (17%)

Query: 88  HDCHLC----------STS-----LSTICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131
            DC LC                   S + +       L+I+G  P     N +G+PF+G 
Sbjct: 27  QDCPLCPRLVEFREAQRAREPSWFNSPVPSFGAADGRLLIVGLAPGLQGANRTGRPFTGD 86

Query: 132 T-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177
             G +L   L                        IS      PP N+ L     +    +
Sbjct: 87  YAGELLYGTLLRYGFAKGRFEARPDDGLTLVDCRISNAVRCVPPQNKPLPAEINQCRAFL 146

Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
                 +   + ++ +G  + +        +                 I    + H
Sbjct: 147 GATIAAMPRLRSIVALGRISHDTLLKLLGLRAAAAP-FAHGAVHQAGAIKLYDSYH 201


>gi|319405450|emb|CBI79069.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
          Length = 222

 Score = 52.4 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 45/151 (29%), Gaps = 22/151 (14%)

Query: 101 CATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEIMRTQI-------- 150
                    L+I+G  P     N +G+PF+G   G++L   L+     +           
Sbjct: 46  PHKGAATTRLLIVGLAPGLRGANRTGRPFTGDYAGHLLYSTLKKFGFAQGTFAERADDTL 105

Query: 151 -----HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FF 202
                 I       PP N+  S                L   K ++ +G+   N      
Sbjct: 106 ELIDAAIVNSVRCVPPENKPTSAEINTCRNFFSPLLTNLPQLKAIITLGSIAHNSTIRAL 165

Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
           N          GK S++      +   ++ H
Sbjct: 166 NAKILAHPFGHGKISDI----GRLRIFSSYH 192


>gi|167588910|ref|ZP_02381298.1| Uracil-DNA glycosylase superfamily protein [Burkholderia ubonensis
           Bu]
          Length = 199

 Score = 52.4 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 63/199 (31%), Gaps = 25/199 (12%)

Query: 77  LHELKSLLRSFHDC----HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
           L  L + +R+   C     L       +         ++I+G  P    + SG P+   +
Sbjct: 9   LDALLAEIRACRVCEAELPLGP---RPVL-RAHRDARILIVGQAPGARVHASGIPWDDAS 64

Query: 133 GNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP-- 187
           G  +   L          ++  I  +   +P    +  N     C P+ + ++    P  
Sbjct: 65  GKRMRDWLGVDADTFYDASRFAIVPMGFCYPGRGASGDNPPRPECAPLWLDRLLAELPAI 124

Query: 188 KILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KK 245
           ++ L +G   +  F  +         +  W +          L   HP    +     K 
Sbjct: 125 RLTLLVGQYAQRHFLRDARKATLTDTVRAWRDY-----GPAVLPLPHPSP--RNTGWFKH 177

Query: 246 NTWHA---LITLKKALKNL 261
           + W     +  L++ +  L
Sbjct: 178 HPWFDADVVPELRRRVAAL 196


>gi|88799781|ref|ZP_01115355.1| putative uracil-DNA glycosylase family protein [Reinekea sp.
           MED297]
 gi|88777515|gb|EAR08716.1| putative uracil-DNA glycosylase family protein [Reinekea sp.
           MED297]
          Length = 196

 Score = 52.4 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 56/196 (28%), Gaps = 17/196 (8%)

Query: 75  CSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
                L S +R+   C   L   +   + A       ++I G  P       G PFS  +
Sbjct: 5   SQFQTLLSQVRACTHCQAELPDPAQPILQAD--PNARILIAGQAPGKQTLQKGIPFSDAS 62

Query: 133 GNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI 189
           G  L + L   ++       I I  +   +P    +        C  +    +    P I
Sbjct: 63  GKRLRRWLGIDEATFYQADNIAILPMGFCYPGKGDSGDAPPRPECAELWRATLLAALPNI 122

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248
            L +            A +         +          L   HP    +     K+++W
Sbjct: 123 ELTLILGAHA--LKYHAPEYRSVTDAVEDWSALWPDRLVLP--HPSP--RNQAWFKRHSW 176

Query: 249 ---HALITLKKALKNL 261
                L  LK  +  L
Sbjct: 177 FERDVLPMLKSRVSAL 192


>gi|308048103|ref|YP_003911669.1| uracil-DNA glycosylase superfamily protein [Ferrimonas balearica
           DSM 9799]
 gi|307630293|gb|ADN74595.1| uracil-DNA glycosylase superfamily protein [Ferrimonas balearica
           DSM 9799]
          Length = 206

 Score = 52.4 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 67/197 (34%), Gaps = 20/197 (10%)

Query: 62  PLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL--STICATQTEGQDLMIIGYTPSD 119
           P    A  I     S  EL   + + H C LC   L  + +         L+IIG  P  
Sbjct: 5   PTSASAAQIPISDDSTREL---IHTVHACRLCQDVLDPNPVV-QLASSARLLIIGQAPGL 60

Query: 120 SDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNR--NLSNIEMEIC 174
             + SG P++  +G+ L   L   +      +++ I  +   +P   R  +    +    
Sbjct: 61  KVHQSGIPWNDASGDRLRHWLGMDRDTFYDPSRVAIIPMGLCYPGRGRSGDNPPDKRCAP 120

Query: 175 RPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHP 234
           R       +L + ++ L+IG   +  +           + +W+               HP
Sbjct: 121 RWHPTLLAQLPALELTLYIGQYAQKHYL-EGFTSLTDTVARWAEFGPDR-----FPLPHP 174

Query: 235 QELIQYPLI-KKNTWHA 250
               +  L  K++ W  
Sbjct: 175 SP--RNTLWLKRHPWFD 189


>gi|306827877|ref|ZP_07461145.1| uracil DNA glycosylase [Streptococcus pyogenes ATCC 10782]
 gi|304429925|gb|EFM32966.1| uracil DNA glycosylase [Streptococcus pyogenes ATCC 10782]
          Length = 191

 Score = 52.4 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 55/192 (28%), Gaps = 20/192 (10%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTIC-ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           + +L   + +    +L  T           +   ++I+G  P      +   ++ ++G  
Sbjct: 1   MDDLTKAIMA-DKANLSYTERGIFPLYDAPQTARIIIVGQAPGIVAQETKLYWNDRSGIR 59

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNL-----SNIEMEICRPIIMRQIELISPKIL 190
           L   L           +  I P                 E    +     +  +   ++ 
Sbjct: 60  LRDWLGVDNDTFYHSGLFGIIPMDFYYPGKGKSGDLPPREGFAAKWHPPLRALMPEVELT 119

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKK 245
           + +G   ++F+  N A KT     +      P         VHP       L + P    
Sbjct: 120 ILVGRYAQDFYLGNKAYKTLTETVRHFEEYLPDY----FPLVHPSPRNQLWLAKNPW--- 172

Query: 246 NTWHALITLKKA 257
                L+ + + 
Sbjct: 173 -FEQDLLPILQK 183


>gi|49474251|ref|YP_032293.1| hypothetical protein BQ06460 [Bartonella quintana str. Toulouse]
 gi|49239755|emb|CAF26137.1| hypothetical protein BQ06460 [Bartonella quintana str. Toulouse]
          Length = 211

 Score = 52.4 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 57/187 (30%), Gaps = 17/187 (9%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTE------GQDLMIIGYTPSDSDNISG 125
           Q+   + +L+  + S   C      L  +               + I G  P    + S 
Sbjct: 4   QQCNQIIKLEKKIYSCRVCIKHPHYLPPLPHEPRPVVYLSDTASIAIAGQAPGLRVHESS 63

Query: 126 KPFSGKTGNMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ- 181
            PF+  +G  L   L         R+   I  +    P  ++N S++        I  + 
Sbjct: 64  IPFNDCSGERLRNWLNVTSDEFYNRSLFAIVPMGFCFPGYDKNKSDLPPRRECSEIWHEK 123

Query: 182 --IELISPKILLFIGNKTKNFFFNN-DAQKTYQNLGKWSNLCT--PHSIIPTLATVHPQE 236
               +   K++L IG+  + +       +     +  W N+ +         +   HP  
Sbjct: 124 VFQAMPQIKLVLAIGSYAQKWHIAELKHKTVSATVSDWKNILSIRQPRGYNVMPLPHPSW 183

Query: 237 LIQYPLI 243
             +    
Sbjct: 184 --RNTAW 188


>gi|163867985|ref|YP_001609189.1| hypothetical protein Btr_0779 [Bartonella tribocorum CIP 105476]
 gi|161017636|emb|CAK01194.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
          Length = 227

 Score = 52.4 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 53/199 (26%), Gaps = 25/199 (12%)

Query: 56  IRHIHSPLVQQADSIAQKACSLHELKSLLRSFH-DCHLCSTS--LSTICATQTEGQDLMI 112
              +++PL                L   +  +         +           +   L+I
Sbjct: 3   PNAMNNPLTSLCPEPPPNCNLCPRLYQFIADWRVKEPSWHNAPVRPFFPYKGADTTRLLI 62

Query: 113 IGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEIMRTQIH-------------ISMISP 157
           +G  P     N +G+PF+G   G++L   L+     +                 I     
Sbjct: 63  VGLAPGLRGANRTGRPFTGDYAGHLLYSTLKKFGFAQGTFEERADDNLELIDVAIVNSVR 122

Query: 158 WHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FFNNDAQKTYQNLG 214
             PP N+                   L   K ++ +G    +      N          G
Sbjct: 123 CVPPENKPTGAEINTCRSFFSPLLTNLPKLKAVITLGTIAHHSTIRALNAKVLAHPFEHG 182

Query: 215 KWSNLCTPHSIIPTLATVH 233
           K +N+      +   ++ H
Sbjct: 183 KINNV----GRLRIFSSYH 197


>gi|315501950|ref|YP_004080837.1| uracil-DNA glycosylase superfamily [Micromonospora sp. L5]
 gi|315408569|gb|ADU06686.1| Uracil-DNA glycosylase superfamily [Micromonospora sp. L5]
          Length = 237

 Score = 52.1 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 51/161 (31%), Gaps = 28/161 (17%)

Query: 98  STICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQ-------------S 142
             +         + I+G  P+    N +G+ F+G ++G++L   L               
Sbjct: 50  RPVPGLGPADARIAILGLAPAAHGGNRTGRIFTGDRSGDVLFAALHRAGLANQPTSVSAD 109

Query: 143 IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNF 200
             +      I       PP N   +  E + C P + R++ELI P  ++++ +G      
Sbjct: 110 DGLTLRDTRIFAAVRCAPPDN-KPTPDERDTCAPWLHREVELIRPTLRVVVALGAFAWAA 168

Query: 201 -------FFNNDAQKTYQNLGKWSNLCTPHSIIP-TLATVH 233
                   +           G           +P  L   H
Sbjct: 169 WWPVLRQVYGQRPPTPRPAFG--HGAHWSGESVPALLGCYH 207


>gi|77407839|ref|ZP_00784592.1| Unknown [Streptococcus agalactiae COH1]
 gi|77173586|gb|EAO76702.1| Unknown [Streptococcus agalactiae COH1]
          Length = 194

 Score = 52.1 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/161 (13%), Positives = 59/161 (36%), Gaps = 16/161 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPP 161
            +   + I+G  P      +   +  K+G+ L + L   +       +  +  +  ++P 
Sbjct: 32  PKTARINIVGQAPGLKTQEAILYWKDKSGDRLRQWLGVDEETFYHSGKFAVLPLDFYYPG 91

Query: 162 GNR--NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSN 218
             +  +L   +    +   +   E+ + ++ L +G   + ++  + A K   + +  + +
Sbjct: 92  KGKSGDLPPRKGFAEKWHPLILKEMPNVQLTLLVGQYAQKYYLGSSAHKNLTETVKSYKD 151

Query: 219 LCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITL 254
               +     L  VHP       L + P  +K+    L  +
Sbjct: 152 YLPDY-----LPLVHPSPRNQIWLKKNPWFEKDLIVDLQKI 187


>gi|326403249|ref|YP_004283330.1| hypothetical protein ACMV_11010 [Acidiphilium multivorum AIU301]
 gi|325050110|dbj|BAJ80448.1| hypothetical protein ACMV_11010 [Acidiphilium multivorum AIU301]
          Length = 214

 Score = 52.1 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 60/187 (32%), Gaps = 23/187 (12%)

Query: 61  SPLVQQADSIAQKACSLHELKSLLRSFHDC----HLCSTSLSTICATQTEGQDLMIIGYT 116
              V    + A    ++ ++ +  R+   C     L       +    +    ++I+G  
Sbjct: 5   PDPVVAGGAGATAGETIDDVAAAARACTVCAASLPLGP---RPVF-RISATARVLIVGQA 60

Query: 117 PSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNI 169
           P    + SG P++  +G+ L   L   ++     ++I I  +   +P     G       
Sbjct: 61  PGTKVHASGIPWNDPSGDRLRDWLGIDRATFYDESRIAIVPMGLCYPGRLARGGDAPPRP 120

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
           E        +R   + + ++ L +G+    +          +  G  + L +        
Sbjct: 121 ECGRLWQGRLR-AAMPAIRLTLLVGSHAILYHLG-KGAMEERVRGFAAYLPSR------F 172

Query: 230 ATVHPQE 236
              HP  
Sbjct: 173 PLPHPSW 179


>gi|295397230|ref|ZP_06807328.1| uracil-DNA glycosylase [Aerococcus viridans ATCC 11563]
 gi|294974511|gb|EFG50240.1| uracil-DNA glycosylase [Aerococcus viridans ATCC 11563]
          Length = 196

 Score = 52.1 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 57/174 (32%), Gaps = 20/174 (11%)

Query: 99  TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158
            +    ++   + IIG  P      +   ++ ++G+ L   +     +  +  +    P 
Sbjct: 30  PVFYA-SKNARIAIIGQAPGKKVEETQLFWNDQSGDRLRNWMGISRDLFYKTDMIAQLPM 88

Query: 159 HPPGNRNLSNIEMEICRPIIMR---QIELISP--KILLFIGNKTKNFFFNNDAQKT-YQN 212
                      +    +    +   QI    P  + ++ IGN ++  +   D QK   + 
Sbjct: 89  DFYYPGKAKTGDKPPRKGFADKFHPQILKEMPNIETIILIGNYSQKHYLGKDRQKNLTET 148

Query: 213 LGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH------ALI-TLKKALK 259
           +  + +    +        VHP   +    +KKN W            ++  +K
Sbjct: 149 VKHYKDYLPEY-----FPLVHPSP-LNQRWMKKNPWFETDVLPDFKEMIQTYIK 196


>gi|49474059|ref|YP_032101.1| hypothetical protein BQ04210 [Bartonella quintana str. Toulouse]
 gi|49239563|emb|CAF25920.1| hypothetical protein BQ04210 [Bartonella quintana str. Toulouse]
          Length = 222

 Score = 52.1 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 48/183 (26%), Gaps = 38/183 (20%)

Query: 85  RSFHDCH-LCS----------TSLSTI-----CATQTEGQDLMIIGYTPSDSD-NISGKP 127
           ++ + C  L            +  +                L+IIG  P     N +G+P
Sbjct: 14  QNCNLCPRLHKFIADWRIKEPSWHNAPVRPFFPYKGAATTRLLIIGLAPGLRGANRTGRP 73

Query: 128 FSGKT-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEI 173
           F+G   G +L   L+                       I       PP N+  S      
Sbjct: 74  FTGDYAGQLLYSTLKKFGFAQGIFEERADDNLELIDTAIVNSVRCVPPENKPTSAEINTC 133

Query: 174 CRPIIMRQIELISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230
                     L   K ++ +G    +      N          G  +N+      +   +
Sbjct: 134 RYFFSPLLTNLPKLKAVITLGTIAHHSTIHALNAKISTHPFEHGGVNNI----GRLRIFS 189

Query: 231 TVH 233
           + H
Sbjct: 190 SYH 192


>gi|308182861|ref|YP_003926988.1| hypothetical protein HPPC_03540 [Helicobacter pylori PeCan4]
 gi|308065046|gb|ADO06938.1| hypothetical protein HPPC_03540 [Helicobacter pylori PeCan4]
          Length = 192

 Score = 52.1 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/184 (12%), Positives = 54/184 (29%), Gaps = 13/184 (7%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            ++   + + + C     S   +         L  I  TP    +      +     ML+
Sbjct: 20  KQVYEGIENCNLCKRHQNSK-PVIGLFNPTSKLTFITLTP--MLDSQLNFLNNLKAAMLE 76

Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++Q           I  +       N      E+  C   +  Q++  + K+++  G  
Sbjct: 77  SIIQKVFNCPLKDCSILSLLKC--DSNSLNLEEEINACLFHLTWQLDNSASKVIVVFGEI 134

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                 N   +++                   L+T   +++++ P +KK          +
Sbjct: 135 LPKRLLNLSKEES-------FGCIVSLKTKHFLSTHALEDMLKNPTLKKEALAHFKIALQ 187

Query: 257 ALKN 260
            L  
Sbjct: 188 FLNQ 191


>gi|6002287|emb|CAB56749.1| hypothetical protein [Acidianus ambivalens]
          Length = 157

 Score = 52.1 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 56/156 (35%), Gaps = 22/156 (14%)

Query: 121 DNISGKPFSG-KTGNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNL 166
            N +G+ F+G ++G  + K L  + +   +              +++      PP N   
Sbjct: 5   GNRTGRVFTGDESGKWVTKALYELGLSNLEFSLSREENLILRGVYLTNAVKCAPPEN-KP 63

Query: 167 SNIEMEICRPIIMRQIEL-ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI 225
              E+  C   + ++I    + K++L +G    +       +K   + G   ++      
Sbjct: 64  LREEILNCNYFLRKEIMSLRNLKVILALGKMAFDSVCMAFNEKCKFSHGVVYDV----KG 119

Query: 226 IPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
              + + HP    Q     + TW + + + +    L
Sbjct: 120 KKIVGSYHPSA--QNTKTGRLTWESFMQVVRKAYEL 153


>gi|25011339|ref|NP_735734.1| hypothetical protein gbs1290 [Streptococcus agalactiae NEM316]
 gi|76799515|ref|ZP_00781650.1| uracil-DNA glycosylase [Streptococcus agalactiae 18RS21]
 gi|24412877|emb|CAD46949.1| Unknown [Streptococcus agalactiae NEM316]
 gi|76585138|gb|EAO61761.1| uracil-DNA glycosylase [Streptococcus agalactiae 18RS21]
          Length = 194

 Score = 52.1 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 22/161 (13%), Positives = 59/161 (36%), Gaps = 16/161 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPP 161
            +   + I+G  P      +   +  K+G+ L + L   +       +  +  +  ++P 
Sbjct: 32  PKTARINIVGQAPGLKTQEARLYWKDKSGDRLRQWLGVDEETFYHSGKFAVLPLDFYYPG 91

Query: 162 GNR--NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSN 218
             +  +L   +    +   +   E+ + ++ L +G   + ++  + A K   + +  + +
Sbjct: 92  KGKSGDLPPRKGFAEKWHPLILKEMPNVQLTLLVGQYAQKYYLGSSAHKNLTETVKSYKD 151

Query: 219 LCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITL 254
               +     L  VHP       L + P  +K+    L  +
Sbjct: 152 YLPDY-----LPLVHPSPRNQIWLKKNPWFEKDLIVDLQKI 187


>gi|254779363|ref|YP_003057468.1| putative transferase [Helicobacter pylori B38]
 gi|254001274|emb|CAX29251.1| Putative transferase [Helicobacter pylori B38]
          Length = 209

 Score = 52.1 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 60/184 (32%), Gaps = 13/184 (7%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            ++   + + + C     S   +         L  I  TP    +      +     ML+
Sbjct: 37  KQVHEGIENCNLCKRHQHSK-PVTGLFNPTSKLTFITLTP--MLDSQLNFLNNLKAVMLE 93

Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++Q           I  +       N      E+  C P +  Q++  + K+++  G  
Sbjct: 94  SIIQKVFNYPLKDCSILSLLKC--DSNSLNLEEEINACLPHLTWQLDNSASKVIVVFGEI 151

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                 N       ++ G+  +L T H     L+T   +++++ P +KK          +
Sbjct: 152 LPKRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFKIALQ 204

Query: 257 ALKN 260
            L  
Sbjct: 205 FLNQ 208


>gi|300022584|ref|YP_003755195.1| uracil-DNA glycosylase superfamily [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299524405|gb|ADJ22874.1| Uracil-DNA glycosylase superfamily [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 198

 Score = 52.1 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/174 (13%), Positives = 55/174 (31%), Gaps = 19/174 (10%)

Query: 75  CSLHELKSLLRSFHDCHLCST----SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130
            +   L   LR    C +C+         +    + G  L+I+G  P    +++G P++ 
Sbjct: 3   KNSASLAKALRDVSACRICAAELPLGPRPVVQLGS-GARLLIVGQAPGRKVHLTGVPWND 61

Query: 131 KTGNMLDKML---QSIEIMRTQIHISMISPWHP-----PGNRNLSNIEMEICRPIIMRQI 182
            +G+ L + L   +       +I +  +   +P      G+              ++R +
Sbjct: 62  ASGDRLREWLGLDRDTFFDAAKIALLPMGFCYPGVGKSGGDNPPRPECAPHWHERLLRHL 121

Query: 183 ELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236
             +     + +G      +       +     +  ++  P          HP  
Sbjct: 122 PEVQL--TVLVGQYAHRRYLGLRGASSVTATVRDFSMYAP----RFFPLPHPSW 169


>gi|319783620|ref|YP_004143096.1| hypothetical protein Mesci_3930 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317169508|gb|ADV13046.1| hypothetical protein Mesci_3930 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 226

 Score = 52.1 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 59/187 (31%), Gaps = 18/187 (9%)

Query: 78  HELKSLLRSFHDCHLC--STSLSTICATQTE------GQDLMIIGYTPSDSDNISGKPFS 129
            EL++L+     C +C  + +   +               ++I    P    ++SG PF+
Sbjct: 24  AELENLVARVRACRICVENPAGKPLPHEPRPVLRPSSTARILIASQAPGTKVHLSGMPFT 83

Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSN-IEMEICRPIIMRQIELI 185
             +G+ L   L           +  I  +    P  +    +      C       +   
Sbjct: 84  DASGDRLRSWLGVTSDEFYDIEKFAIVPMGFCFPGQDAKGGDLPPRRECAAAWRAPLMAS 143

Query: 186 SPKI--LLFIGNKTKNFFFN-NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL 242
            P+I  +L IG   +++           + +  W ++         L   HP    +   
Sbjct: 144 MPRIDLVLTIGIYAQSWHMGAARRPSLTETVMDWRSIWENSIGPKVLPLPHPSW--RNTG 201

Query: 243 I-KKNTW 248
             KKN W
Sbjct: 202 WLKKNPW 208


>gi|148554142|ref|YP_001261724.1| uracil-DNA glycosylase superfamily protein [Sphingomonas wittichii
           RW1]
 gi|148499332|gb|ABQ67586.1| Uracil-DNA glycosylase superfamily [Sphingomonas wittichii RW1]
          Length = 232

 Score = 52.1 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/176 (13%), Positives = 46/176 (26%), Gaps = 28/176 (15%)

Query: 85  RSFHDCHLCST--SLS----------TICATQTEGQDLMIIGYTPS-DSDNISGKPFSGK 131
                C   +   +             +      G  L+I+G  P     N +G+ F+G 
Sbjct: 9   ADCALCPRLAAYRATQRIENPSWFNAPVPTFGDSGARLVIVGLAPGLKGANRTGRAFTGD 68

Query: 132 -TGNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSNIEMEICRPI 177
            +G ML  +L    + R                 I       PP NR            +
Sbjct: 69  GSGTMLFDVLADHGLARGGYGHDADDGLRLDGTVIVNAVRCVPPANRPTPAEVRACRPFL 128

Query: 178 IMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
                   +P++++ +G    +       +   +                 + + H
Sbjct: 129 AGPLNGAPAPRVIVALGRIAHDATLAALGETPARFRFA-HGAEHRPEGSILIDSYH 183


>gi|254503679|ref|ZP_05115830.1| Uracil DNA glycosylase superfamily [Labrenzia alexandrii DFL-11]
 gi|222439750|gb|EEE46429.1| Uracil DNA glycosylase superfamily [Labrenzia alexandrii DFL-11]
          Length = 215

 Score = 52.1 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 57/194 (29%), Gaps = 22/194 (11%)

Query: 73  KACSLHELKSLLRSFHDC-------HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISG 125
           K   +  L + +R    C        L       +    +    + I G  P    + SG
Sbjct: 6   KIQEIEALANAVRGCRICVETPEKAPL-PHEPRPVL-QASSKARICISGQAPGTRVHKSG 63

Query: 126 KPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRN--LSNIEMEICRPIIMR 180
           +PF+  +G+ L   +   +++      + I  +    P  +          E  +    R
Sbjct: 64  RPFTDPSGDRLRSWMGIGENVFYDPDLLAIVPMGFCFPGLDAKGGDLPPRPECRKVWHDR 123

Query: 181 QI-ELISPKILLFIGNKTKNFFFNN-DAQKTYQNLGKWSNLCTPHS---IIPTLATVHPQ 235
               +   +++L IG   + +           + +  W               L   HP 
Sbjct: 124 LFAAMPQIELILVIGQYAQAYHLGKARKGSLTETVAAWKTYFQESGQSNRPLVLPLPHPS 183

Query: 236 ELIQYPLI-KKNTW 248
              +     KKN W
Sbjct: 184 W--RNNAWLKKNPW 195


>gi|328544443|ref|YP_004304552.1| Uracil DNA glycosylase superfamily [polymorphum gilvum SL003B-26A1]
 gi|326414185|gb|ADZ71248.1| Uracil DNA glycosylase superfamily [Polymorphum gilvum SL003B-26A1]
          Length = 228

 Score = 52.1 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 24/210 (11%), Positives = 58/210 (27%), Gaps = 31/210 (14%)

Query: 59  IHSPLVQQADSIAQKACSLHELKSLLRSFHDC---HLCS---TSLSTICATQTEGQDLMI 112
           ++    +           + EL   + +   C    L +        +    +    + I
Sbjct: 2   VNKDRSRAVRGAGAGREPVDELARAIAACRRCVEAPLKAPLPHEPRPVV-RLSATARICI 60

Query: 113 IGYTPSDSDNISGKPFSGKTGNMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNI 169
            G  P    + SG PF+  +G+ L   +     +     ++ I  +    P  +    + 
Sbjct: 61  CGQAPGTRVHASGTPFTDPSGDRLRAWMGIGPEVFYDTAKLAIVPMGFCFPGLDAKGGDR 120

Query: 170 EMEI-CRPIIMRQIELISPK--ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII 226
                CR +   Q+    P+  ++L +G   + +          +     +        I
Sbjct: 121 PPRAECRRLWHDQVFAAMPQLELILAVGQYAQAYHL------PARKRASLTETVADWRAI 174

Query: 227 P----------TLATVHPQELIQYPLIKKN 246
                       +   HP    +     + 
Sbjct: 175 RTETADAGRAVVVPLPHPSW--RNNAWLRK 202


>gi|71903039|ref|YP_279842.1| uracil DNA glycosylase superfamily protein [Streptococcus pyogenes
           MGAS6180]
 gi|71802134|gb|AAX71487.1| uracil DNA glycosylase superfamily protein [Streptococcus pyogenes
           MGAS6180]
          Length = 191

 Score = 52.1 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 55/192 (28%), Gaps = 20/192 (10%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTIC-ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           + +L   + +    +L  T           +   L+I+G  P      +   ++ ++G  
Sbjct: 1   MDDLTKAIMADEA-NLSYTERGIFPLYDAPQTARLIIVGQAPGIVAQETKLYWNDRSGIR 59

Query: 136 LDKMLQSIEIMRTQIHISMISPWHPPGNRNL-----SNIEMEICRPIIMRQIELISPKIL 190
           L   L           +  I P                 E    +     +  +   ++ 
Sbjct: 60  LRDWLGVDNDTFYHSGLFGIIPMDFYYPGKGKSGDLPPREGFAAKWHPPLRALMPEVELT 119

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKK 245
           + +G   ++F+  N A KT     +      P         VHP       L + P    
Sbjct: 120 ILVGRYAQDFYLGNKAYKTLTETVRHFEDYLPDY----FPLVHPSPRNQLWLAKNPW--- 172

Query: 246 NTWHALITLKKA 257
                L+ + + 
Sbjct: 173 -FEQDLLPILQK 183


>gi|329114799|ref|ZP_08243556.1| Hypothetical protein APO_1597 [Acetobacter pomorum DM001]
 gi|326695930|gb|EGE47614.1| Hypothetical protein APO_1597 [Acetobacter pomorum DM001]
          Length = 213

 Score = 52.1 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 53/193 (27%), Gaps = 23/193 (11%)

Query: 65  QQADSIAQKACSLHELKSLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTPSDSDNI 123
                 +     L+ L   +R    C          +    +    L+I G  P    + 
Sbjct: 13  PSPAESSDVETQLNCLVQEIRQCTACARKLPLGPRPVLHV-SPHARLLIAGQAPGTRVHE 71

Query: 124 SGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH----PPGNRNLSNIEMEICRP 176
           +G  F+  +G+ L   L   +       ++ I  ++  +    P G       E      
Sbjct: 72  TGISFNDASGDRLRGWLGMSRDAFYDSNRVAILPMALCYPGVLPKGGDRPPPPECANLWR 131

Query: 177 IIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII--PTLATVHP 234
                  L + ++ L +G+  +N+             GK                   HP
Sbjct: 132 -ERILALLPNLRLTLLVGSYAQNYVLGK---------GKVYERTEHFQDFLPQYFPLPHP 181

Query: 235 QELIQYPLIKKNT 247
               +    ++ T
Sbjct: 182 SW--RTGAWERKT 192


>gi|319898685|ref|YP_004158778.1| hypothetical protein BARCL_0514 [Bartonella clarridgeiae 73]
 gi|319402649|emb|CBI76195.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
          Length = 222

 Score = 51.7 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 45/151 (29%), Gaps = 22/151 (14%)

Query: 101 CATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEIMRTQI-------- 150
                    L+I+G  P     N +G+PF+G   G++L   L+     +           
Sbjct: 46  PHKGAATTRLLIVGLAPGLRGANRTGRPFTGDYAGHLLYSTLKKFNFAQGTFAERPDDTL 105

Query: 151 -----HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FF 202
                 I       PP N+                   L   K ++ +G+   N      
Sbjct: 106 ELIDAAIVNSVRCVPPDNKPTGAEINTCRHFFSPLLTNLPQLKAIITLGSIAHNSTIRAL 165

Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
           N        + GK S++      +   ++ H
Sbjct: 166 NAKIVVHPFSHGKVSDI----GRLRIFSSYH 192


>gi|294012176|ref|YP_003545636.1| putative uracil-DNA glycosylase [Sphingobium japonicum UT26S]
 gi|292675506|dbj|BAI97024.1| putative uracil-DNA glycosylase [Sphingobium japonicum UT26S]
          Length = 229

 Score = 51.7 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 52/191 (27%), Gaps = 32/191 (16%)

Query: 74  ACSLHELKSLLRSFHDCHLCST---------------SLSTICATQTEGQDLMIIGYTPS 118
           A +L        + HDC LC                   + +         + I+G  P 
Sbjct: 12  AMTLQSPIPHGEAPHDCPLCPRLAVLRERNRAEHPGWWNAPVPHFGDPLGRIAIVGLAPG 71

Query: 119 DSD-NISGKPFSGKT-GNMLDKMLQSI-------------EIMRTQIHISMISPWHPPGN 163
               N +G+PF+G   G++L   L                 +      I       PP N
Sbjct: 72  RMGANRTGRPFTGDHAGDLLFATLAKFGLTDGVYEARADDGLTLRGAIILNAVKCLPPQN 131

Query: 164 RNLSNIEMEICRPIIMRQIEL-ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP 222
                 E+  CR  +   +E     ++ + +G             K  +           
Sbjct: 132 -RPLPEEVHNCRAFLKAAVEALPHAQVFVALGQIAHQSTVKALGGKLPKARFAHMAEHRM 190

Query: 223 HSIIPTLATVH 233
            S    + + H
Sbjct: 191 PSGRIVIDSYH 201


>gi|49475297|ref|YP_033338.1| hypothetical protein BH05020 [Bartonella henselae str. Houston-1]
 gi|49238103|emb|CAF27310.1| hypothetical protein BH05020 [Bartonella henselae str. Houston-1]
          Length = 222

 Score = 51.7 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 44/151 (29%), Gaps = 22/151 (14%)

Query: 101 CATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEIMRTQIH------- 151
                +   L+I+G  P     N +G+PF+G   G++L   L+     +           
Sbjct: 46  PYKGADTTRLLIVGLAPGLRGANRTGRPFTGDYAGHLLYSTLKKFGFAQGTFEERADDTL 105

Query: 152 ------ISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FF 202
                 I       PP N+                   L   K ++ +G    +      
Sbjct: 106 ELIDAAIVNSVRCVPPENKPTGAEINTCRYFFSPLLTNLPKLKAVITLGTIAHHSTLRAL 165

Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
           N          G+ +N+      +   ++ H
Sbjct: 166 NAKVLAHPFGHGQINNI----GRLRIFSSYH 192


>gi|149184675|ref|ZP_01862993.1| hypothetical protein ED21_28193 [Erythrobacter sp. SD-21]
 gi|148831995|gb|EDL50428.1| hypothetical protein ED21_28193 [Erythrobacter sp. SD-21]
          Length = 261

 Score = 51.7 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 68/216 (31%), Gaps = 26/216 (12%)

Query: 1   MTSKRILSQE-----QILTIALFYADSGVY---------WVFDEPNNEATYESQRKEKSI 46
           M +    ++E      +     ++ ++GV          W+ +    +A    + K+   
Sbjct: 1   MIADTPKTRELSPADALEAALDWWREAGVEDDYRDEATSWLAEPEQEQAVASPKPKKPPE 60

Query: 47  DSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKS--LLRSFHDCHLCSTSLSTICATQ 104
           +    P+       +P  +   +      SL + +   L+           + S +    
Sbjct: 61  EPKQTPLQRAFEAKAPANRIGGATEAYPDSLEKFREWWLVEPSLA---SVGTESRLPPRG 117

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
             G  LM++   P   +       SG  G  +D +L ++ I   + +++   P    G  
Sbjct: 118 VGGAKLMVL--IPEPMEGDGEALLSGAPGKFVDAVLSAMGIAPHEAYLASALP---AGVT 172

Query: 165 NLSNIEMEIC--RPIIMRQIELISPKILLFIGNKTK 198
                E+       +    + L  P  +L  G    
Sbjct: 173 LPDWTELSARGLGDVTRHHVVLAQPHRVLAFGRSLA 208


>gi|293189113|ref|ZP_06607839.1| uracil DNA glycosylase family protein [Actinomyces odontolyticus
           F0309]
 gi|292821958|gb|EFF80891.1| uracil DNA glycosylase family protein [Actinomyces odontolyticus
           F0309]
          Length = 199

 Score = 51.7 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/176 (13%), Positives = 58/176 (32%), Gaps = 24/176 (13%)

Query: 99  TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMI 155
            +         +MI+G  P      +G  ++ ++G+ L   +   +       ++ I  +
Sbjct: 33  PLFYAG-PECRIMIVGQAPGRVAEETGVVWNDRSGDRLRDWMGVDRDTFYESGKLAIVPM 91

Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPK--ILLFIGNKTKNFFFNNDAQKTYQNL 213
             + P   ++      +        ++  + PK  + + +G      +    +       
Sbjct: 92  DFYFPGTGKSGDLPPRKDFADTWHPRLLELMPKLEMTILVGAYATRRYLGLKSSA----- 146

Query: 214 GKWSNLCTPHSIIPTLATV----HPQELIQYPLI-KKNTW--HALI-TLKKALKNL 261
              + +   +     L T     HP    +  +  KKN W    ++  LK  + +L
Sbjct: 147 -SLTEVVRDYKRY--LPTYFPLVHPSP--RNQMWMKKNPWFAADVLPDLKARVASL 197


>gi|30249111|ref|NP_841181.1| hypothetical protein NE1122 [Nitrosomonas europaea ATCC 19718]
 gi|30138728|emb|CAD85033.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718]
          Length = 201

 Score = 51.7 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 61/182 (33%), Gaps = 22/182 (12%)

Query: 77  LHELKSLLRSFHDCHLCST----SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
           +++L+SL+     C LC+         +     E   ++I    P    + +G PF+  +
Sbjct: 1   MNDLESLISQVRRCTLCAEHLPLGPRPVF-QLHETARILIASQAPGRRVHETGLPFNDPS 59

Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPP-------GNRNLSNIEMEICRPIIMRQIELI 185
           G+ L + L     +        I P           G+           R  ++  ++  
Sbjct: 60  GDRLREWLNMTRTIFYDPRRIAILPMGLCFPGTGKSGDLPPRPECAPAWRSALLSHLK-- 117

Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLG-KWSNLCTPHSIIPTLATVHPQ-----ELIQ 239
           + ++ L +G   + ++F    +K    L     +       I  +   HP       L +
Sbjct: 118 NIRLTLLVGQYAQAYYFTRQGRKPVATLTENVRSWQKFWPDI--VPLPHPSPRNNLWLRR 175

Query: 240 YP 241
            P
Sbjct: 176 NP 177


>gi|212636050|ref|YP_002312575.1| Phage SPO1 DNA polymerase domain-containing protein [Shewanella
           piezotolerans WP3]
 gi|212557534|gb|ACJ29988.1| Phage SPO1 DNA polymerase domain protein [Shewanella piezotolerans
           WP3]
          Length = 199

 Score = 51.3 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 52/187 (27%), Gaps = 25/187 (13%)

Query: 77  LHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L  L   ++    C  HL   +   +         ++I G  P    +  G PF   +G 
Sbjct: 7   LDNLLKQVQQCQLCSEHLPFAAKPIVQLASN--AKILIAGQAPGQKTHHKGHPFDDASGE 64

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRP-------IIMRQIELISP 187
            L   L           +    P       + S+ + +              RQ  L   
Sbjct: 65  RLRSWLGVTREQFYDPELFAFLPMGFCFPGSYSSADKKSGDKPPRPECAATWRQPILNEL 124

Query: 188 KIL---LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQ 239
           K +   L +G     +          + + +W  L         L   HP       L +
Sbjct: 125 KHIELTLLVGQYAIEWHLKRKLAV-TKAVEQWQELWPQ-----VLVMPHPSPRNNIWLKR 178

Query: 240 YPLIKKN 246
           +P  ++ 
Sbjct: 179 HPEFEQQ 185


>gi|163760602|ref|ZP_02167683.1| hypothetical protein HPDFL43_11926 [Hoeflea phototrophica DFL-43]
 gi|162282217|gb|EDQ32507.1| hypothetical protein HPDFL43_11926 [Hoeflea phototrophica DFL-43]
          Length = 181

 Score = 51.3 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/150 (12%), Positives = 49/150 (32%), Gaps = 18/150 (12%)

Query: 100 ICATQTEGQDLMIIGYTPSDSDNI-SGKPFSGKT-GNMLDKMLQSIEI------------ 145
           I        +L+++G  P       +G+PF+G   G++L + L +               
Sbjct: 5   IPPEGAGSVELLVVGLAPGLRGANLTGRPFTGDFAGDLLYETLGAHGFASGTFEARRDDS 64

Query: 146 -MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF-FFN 203
               +  I+      PP N+ +        + +      + + + ++ +G  + +     
Sbjct: 65  LRLRRTAITNAVRCVPPQNKPVGAEINTCRKFLNGTITGMHNLRAIVTLGKISHDSTVRG 124

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
              + +  + G           +   ++ H
Sbjct: 125 LGGKLSAHSFGHQRETEI--DGVRIFSSYH 152


>gi|313126954|ref|YP_004037224.1| uracil-DNA glycosylase [Halogeometricum borinquense DSM 11551]
 gi|312293319|gb|ADQ67779.1| uracil-DNA glycosylase [Halogeometricum borinquense DSM 11551]
          Length = 195

 Score = 51.3 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/147 (12%), Positives = 40/147 (27%), Gaps = 10/147 (6%)

Query: 98  STICATQTEGQDLMIIGYTPSDS-DNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMIS 156
             +           +IG  P      I+G PF+ + G  L   L    ++ T      ++
Sbjct: 7   RFVPGYGDANAYFHVIGDHPGVHGGKITGVPFTNEPGIRLQAALADAGLLETTGDQPTVA 66

Query: 157 PWHPPGNRNLSNI------EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY 210
                              E +        ++  I+  +L  +G +   +   N   +  
Sbjct: 67  KTFLSYLHMGVPDGTPSQAEYDDLERFFDAELRAIAAHVLFPVGARATKYVLENYTAQAR 126

Query: 211 QN---LGKWSNLCTPHSIIPTLATVHP 234
           +    + +        S    L    P
Sbjct: 127 KISVEMEELHGQEVRGSGFLVLPIADP 153


>gi|257066671|ref|YP_003152927.1| Uracil-DNA glycosylase superfamily [Anaerococcus prevotii DSM
           20548]
 gi|256798551|gb|ACV29206.1| Uracil-DNA glycosylase superfamily [Anaerococcus prevotii DSM
           20548]
          Length = 190

 Score = 51.3 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 54/159 (33%), Gaps = 17/159 (10%)

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL 166
              ++IIG  P      +G  F+ K+G  L   L  I++         I P         
Sbjct: 33  DSKILIIGQAPGKRVEETGILFNDKSGERLVDWL-GIDMKTLHGGDFSIIPMDFYYPGKG 91

Query: 167 SNIEMEICRPIIMRQIE------LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220
            + + +  R  I ++        L + ++ + IG  ++ F+  ++ +K      K     
Sbjct: 92  KSGD-KAPRRFIAKEYHPYLLENLKNIELTILIGAYSQKFYLKDNFKKNLTETVKSFEDY 150

Query: 221 TPHSIIPTLATVHPQEL-----IQYPLIKKNTWHALITL 254
            P         VHP  L      + P  +K     L  L
Sbjct: 151 LP----KYFPLVHPSPLNNRWMAKNPFFEKEVLPDLRNL 185


>gi|76788183|ref|YP_329917.1| hypothetical protein SAK_1304 [Streptococcus agalactiae A909]
 gi|77405404|ref|ZP_00782498.1| Unknown [Streptococcus agalactiae H36B]
 gi|77412792|ref|ZP_00788997.1| Unknown [Streptococcus agalactiae 515]
 gi|76563240|gb|ABA45824.1| uracil DNA glycosylase family protein [Streptococcus agalactiae
           A909]
 gi|77161088|gb|EAO72194.1| Unknown [Streptococcus agalactiae 515]
 gi|77175986|gb|EAO78761.1| Unknown [Streptococcus agalactiae H36B]
 gi|319745206|gb|EFV97525.1| uracil DNA glycosylase [Streptococcus agalactiae ATCC 13813]
          Length = 194

 Score = 51.3 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/161 (13%), Positives = 59/161 (36%), Gaps = 16/161 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPP 161
            +   + I+G  P      +   +  K+G+ L + L   +       +  +  +  ++P 
Sbjct: 32  PKTARINIVGQAPGLKTQEARLYWKDKSGDRLRQWLGVDEETFYHSGKFAVLPLDFYYPG 91

Query: 162 GNR--NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSN 218
             +  +L   +    +   +   E+ + ++ L +G   + ++  + A K   + +  + +
Sbjct: 92  KGKSGDLPPRKGFAEKWHPLILKEMPNVQLTLLVGQYAQKYYLGSSAHKNLTETVKAYKD 151

Query: 219 LCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITL 254
               +     L  VHP       L + P  +K+    L  +
Sbjct: 152 YLPDY-----LPLVHPSPRNQIWLKKNPWFEKDLIVDLQKI 187


>gi|187928293|ref|YP_001898780.1| Uracil-DNA glycosylase superfamily protein [Ralstonia pickettii
           12J]
 gi|187725183|gb|ACD26348.1| Uracil-DNA glycosylase superfamily [Ralstonia pickettii 12J]
          Length = 205

 Score = 51.3 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 56/175 (32%), Gaps = 13/175 (7%)

Query: 84  LRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
           +R+  +C   L       + A       ++IIG  P    + +G P++ ++G+ L + LQ
Sbjct: 20  IRACRECKGALAHEPRPVVVAD--RRARVLIIGQAPGRIVHETGIPWNDRSGDRLRQWLQ 77

Query: 142 ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNK 196
                     +I +  +    P    N        C P   R +    P  K+ L +G  
Sbjct: 78  ISYDDFYADRRIAVVPMGFCFPGTGANGDLPPRPECAPRWHRPLLTAMPDVKLALLVGTY 137

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTWHA 250
            +  + +   +         +           L   HP    +     K N W  
Sbjct: 138 AQRNYLDV-PRDWSLTDVVRNGPVQDADGRVLLPLPHPSP--RNLAWFKHNPWFD 189


>gi|24379662|ref|NP_721617.1| hypothetical protein SMU.1238c [Streptococcus mutans UA159]
 gi|24377617|gb|AAN58923.1|AE014960_4 conserved hypothetical protein [Streptococcus mutans UA159]
          Length = 195

 Score = 51.3 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/206 (10%), Positives = 60/206 (29%), Gaps = 40/206 (19%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQ--------DLMIIGYTPSDSDNISGKP 127
           SL E+   + +         S + +   +             + I+G  P      S   
Sbjct: 3   SLEEITKAIMA--------DSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLY 54

Query: 128 FSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP 187
           ++ K+G+ L + +              + P          + ++   +    +      P
Sbjct: 55  WNDKSGDRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQK---WHQP 111

Query: 188 --------KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII--PTLATVHPQ-- 235
                   ++ + IGN  + ++ +  +        K ++    +          VHP   
Sbjct: 112 ILDLLPDIQLTILIGNYAQKYYLHQKSSV------KLTDTVAHYKKYLPDYFPLVHPSPR 165

Query: 236 ---ELIQYPLIKKNTWHALITLKKAL 258
               + ++P  +      L  + + +
Sbjct: 166 NQIWMSRHPWFEAQVVPDLKKIIQQI 191


>gi|229492045|ref|ZP_04385859.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
 gi|229321069|gb|EEN86876.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
          Length = 205

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/207 (13%), Positives = 58/207 (28%), Gaps = 14/207 (6%)

Query: 64  VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123
           +     +      L EL   +R    C                   L +IG  P    + 
Sbjct: 2   LASTPEMGNMPEPLAELLREIRGCTLCADHLPCGPRPVLQAGPSARLRVIGQAPGRKVHT 61

Query: 124 SGKPFSGKTGNMLDKMLQSIEIMRTQIH---ISMISPWHPPGNRNLSNIEMEICRPIIMR 180
           +G P+   +G+ L   L              +  +   +P   R+        C      
Sbjct: 62  TGVPWDDPSGDCLRAWLGLTPTQFYDPDTVAVMSMGFCYPGKARSGDKPPRSECASHWHG 121

Query: 181 QIELI--SPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237
            +       ++ + +G   +  +          + +    +          L   HP   
Sbjct: 122 ALNDRLLDVRLTVLVGQYAQAHYLRGRRKPTLTETVKAAKDYLPLGY----LPLPHPSP- 176

Query: 238 IQYPLIKKNTW--HALI-TLKKALKNL 261
              P + KN W    ++  ++ A+++L
Sbjct: 177 RNQPWLAKNLWFEEDVLPIVQTAIRSL 203


>gi|167576890|ref|ZP_02369764.1| Uracil DNA glycosylase superfamily superfamily protein
           [Burkholderia thailandensis TXDOH]
          Length = 175

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 56/167 (33%), Gaps = 17/167 (10%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPP 161
                ++I+G  P    + SG P+   +G  L + L    +     +   I  +   +P 
Sbjct: 4   DPRARILIVGQAPGARVHASGIPWDDASGKRLREWLNVDDATFYDESLFAIVPMGFCYPG 63

Query: 162 GNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQKT-YQNLGKWSN 218
              +  N     C P+ + ++    P  ++ L IG   +  F     + +  + +  W  
Sbjct: 64  RGASGDNPPRPECAPLWLDKLLGELPDIRLTLLIGQYAQRRFLGARRKSSLTETVRAWPE 123

Query: 219 LCTPHSIIPTLATVHPQELIQYPLI-KKNTW---HALITLKKALKNL 261
                     +   HP    +     K++ W     L  L+  +  L
Sbjct: 124 Y-----GPEFIPLPHPSP--RNQGWLKQHPWFEAEVLPALRGKVAEL 163


>gi|283956369|ref|ZP_06373849.1| hypothetical protein C1336_000250140 [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|283792089|gb|EFC30878.1| hypothetical protein C1336_000250140 [Campylobacter jejuni subsp.
           jejuni 1336]
          Length = 194

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 59/162 (36%), Gaps = 10/162 (6%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
           ++  +  ELK L+ S   C    T   ++   + +   L+I+      S+N SG   + K
Sbjct: 24  EQVQNFQELKQLVSSCTLCQFSKTRKFSLMEPKIKNAKLLILDVFGQKSENESGILLNSK 83

Query: 132 TGNMLDKML-QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
            G  L   + Q + +     + S +      G  +  +  ++ C P    +++LI P  L
Sbjct: 84  KGKKLKHYIYQILGLCDEDFYFSYLFKCFCNGKFDDFS--LQSCLPFFWNELKLIQPAFL 141

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATV 232
           L +G  T         +  +   G+             + + 
Sbjct: 142 LCLGEYTFKSL---GFKDYHILKGEVFAY----KNFFIMPSY 176


>gi|313675477|ref|YP_004053473.1| uracil-DNA glycosylase superfamily [Marivirga tractuosa DSM 4126]
 gi|312942175|gb|ADR21365.1| Uracil-DNA glycosylase superfamily [Marivirga tractuosa DSM 4126]
          Length = 189

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 74/196 (37%), Gaps = 23/196 (11%)

Query: 79  ELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           +L   +R+  +C   L   +   + A  +    + IIG  P  + + SG P+  K+G+ L
Sbjct: 3   DLLHDIRNCTECLADLPMGANPIVQA--SSQSKIAIIGQAPGIAVHQSGIPWDDKSGDNL 60

Query: 137 DKMLQSIEIMRTQIHISMISP---WHPPGNRNLSNIEMEICRPIIMRQIELIS--PKILL 191
              L   +       +  + P    +P   ++     M+IC P+  +++       K+ L
Sbjct: 61  RNWLGVDKNQFYDEEVFALIPMGLCYPGTGKSGDLAPMKICAPLWHKRLFQAMTEVKLTL 120

Query: 192 FIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKK 245
            +G   + F+    A+ +  + +  +      +  +P     HP         + P  K 
Sbjct: 121 LLGKYAQGFYLGKQAKSSLTKTVQSFEEYRPEYLPLP-----HPSPRNNIWQSKNPWFKA 175

Query: 246 NTWHALITLKKALKNL 261
                L  LK  + ++
Sbjct: 176 EV---LPYLKSRISDI 188


>gi|312862896|ref|ZP_07723136.1| uracil-DNA glycosylase family protein [Streptococcus vestibularis
           F0396]
 gi|322516723|ref|ZP_08069632.1| uracil DNA glycosylase [Streptococcus vestibularis ATCC 49124]
 gi|311101756|gb|EFQ59959.1| uracil-DNA glycosylase family protein [Streptococcus vestibularis
           F0396]
 gi|322124756|gb|EFX96194.1| uracil DNA glycosylase [Streptococcus vestibularis ATCC 49124]
          Length = 194

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/196 (11%), Positives = 61/196 (31%), Gaps = 18/196 (9%)

Query: 75  CSLHELKSLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
            +L EL   +             +  + +   +   + I+G  P      SG  ++  +G
Sbjct: 2   ETLEELTQAIMDDEQNKTYTEQGIKPLFSI-PKTARINIVGQAPGIRAQESGLYWNDPSG 60

Query: 134 NMLDKMLQSIEIMRTQIHISMISP--WHPPGNRNLSNIEMEICRPIIMRQIE---LISPK 188
           + L   +        +  +  I P  ++ PG+    ++           +       + +
Sbjct: 61  DNLRDWMGVSREDFYESGMFAIVPMDFYFPGHGKSGDLPPRKGFADKWHERVLDLAPNIQ 120

Query: 189 ILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPL 242
           + + +GN  + ++ +  +       +  + +    +        VHP         + P 
Sbjct: 121 LTILVGNYAQRYYLHQKSSAKLTDTVKHYKDYLPDY-----FPLVHPSPRNNIWQAKNPW 175

Query: 243 IKKNTWHALITLKKAL 258
             K     L  L + +
Sbjct: 176 FMKEVVPDLKALVQKI 191


>gi|218667930|ref|YP_002425010.1| hypothetical protein AFE_0518 [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|218520143|gb|ACK80729.1| conserved hypothetical protein [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 197

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 59/197 (29%), Gaps = 25/197 (12%)

Query: 80  LKSLLRSFHDCHLCST----SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           L  LL    +C LC+         +         ++I    P    + +G PF+  +G+ 
Sbjct: 6   LAMLLTRVRECELCAGHLPLGARPVL-QMDSRARILIAAQAPGRKVHETGIPFNDASGDR 64

Query: 136 LDKML---QSIEIMRTQIHISMISPWHPPGNR--NLSNIEMEICRPIIMRQIELISPKIL 190
           L   L   + +     Q+ +  +   +P      +L                 L   ++ 
Sbjct: 65  LRAWLGISREVFYDARQVALVPMGFCYPGTGTSGDLPPRPECARAWHGELLPHLQHLQLT 124

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKK 245
           L IG   + +    +A    + +  W            +   HP       L + P    
Sbjct: 125 LVIGQYARAYHLPAEAGTLTEVVHAWRENWPNR-----IPLPHPSPRNNLWLKRNPW--- 176

Query: 246 NTWHALI-TLKKALKNL 261
                LI  L+  +  +
Sbjct: 177 -FEEDLIPMLQARVAEV 192


>gi|83311349|ref|YP_421613.1| Uracil-DNA glycosylase [Magnetospirillum magneticum AMB-1]
 gi|82946190|dbj|BAE51054.1| Uracil-DNA glycosylase [Magnetospirillum magneticum AMB-1]
          Length = 211

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/169 (13%), Positives = 50/169 (29%), Gaps = 32/169 (18%)

Query: 85  RSFHDCHL-----CSTSLS-------TICATQTEGQDLMIIGYTPS-DSDNISGKPFSGK 131
                C        +  +         + +       L+++G  P     N +G+PF+G 
Sbjct: 8   ADCGLCPRLAEFRRANRVQFPGWHHDPVPSFGGLEAPLLVVGLAPGLKGANRTGRPFTGD 67

Query: 132 T-GNMLDKMLQSIEIMRTQ-------------IHISMISPWHPPGNRNLSNIEMEICRPI 177
             G++L   L    + R +               I+  +   PP        E   CRP 
Sbjct: 68  YAGDLLYSTLIRYGLARGEYRAAADDGLELVGCRITNAARCVPP-ANKPLPAEFAACRPF 126

Query: 178 IMRQI-ELISPKILLFIGNKTKNFF---FNNDAQKTYQNLGKWSNLCTP 222
           +  +I  + + + +  +G ++ +                  +   L   
Sbjct: 127 LAAEIAAMPNLRGIFCLGRESHDQVLSTLGVRKAANPFGHARLHALPGG 175


>gi|160872013|ref|ZP_02062145.1| uracil DNA glycosylase superfamily [Rickettsiella grylli]
 gi|159120812|gb|EDP46150.1| uracil DNA glycosylase superfamily [Rickettsiella grylli]
          Length = 195

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 63/184 (34%), Gaps = 21/184 (11%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICA-----TQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
           +++L  L+++  +C  C  +                  L+I+G  P    + +G P++  
Sbjct: 1   MNKLLPLIKNIRNCQRC--ATDLPFNPKPILQAHHLSRLLIVGQAPGVRVHKTGIPWNDP 58

Query: 132 TGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR--QIELIS 186
           +G+ L   +   +       QI I  +   +P           + C    +      L +
Sbjct: 59  SGDRLRHWMNVDKKTFYDIRQIAIIPMGFCYPGKGPLGDLPPRKECAHFWLDKLLAGLPN 118

Query: 187 PKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-K 244
            ++ L IG   + ++ +   +    Q +  + +    +         HP    +     K
Sbjct: 119 IQLTLLIGQYAQRYYLDKQVKANLTQTVASFEDYLPIY-----FPLPHPSP--RNNRWLK 171

Query: 245 KNTW 248
           KN W
Sbjct: 172 KNPW 175


>gi|240850190|ref|YP_002971583.1| uracil-DNA glycosylase family protein [Bartonella grahamii as4aup]
 gi|240267313|gb|ACS50901.1| uracil-DNA glycosylase family protein [Bartonella grahamii as4aup]
          Length = 226

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 44/151 (29%), Gaps = 22/151 (14%)

Query: 101 CATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEIMRTQIH------- 151
                +   L+I+G  P     N +G+PF+G   G++L   L+     +           
Sbjct: 50  PYKGADTTRLLIVGLAPGLRGANRTGRPFTGDYAGHLLYSTLKKFGFAQGTFEERADDTL 109

Query: 152 ------ISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FF 202
                 I       PP N+                   L   K ++ +G    +      
Sbjct: 110 ELIDAAIVNSVRCVPPENKPTGAEINTCRYFFSPLLTNLPKLKAVITLGTIAHHSTIRAL 169

Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
           N          G+ +N+      +   ++ H
Sbjct: 170 NAKVLAHPFGHGEINNI----GRLRIFSSYH 196


>gi|198282813|ref|YP_002219134.1| Uracil-DNA glycosylase superfamily [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|198247334|gb|ACH82927.1| Uracil-DNA glycosylase superfamily [Acidithiobacillus ferrooxidans
           ATCC 53993]
          Length = 202

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 59/197 (29%), Gaps = 25/197 (12%)

Query: 80  LKSLLRSFHDCHLCST----SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           L  LL    +C LC+         +         ++I    P    + +G PF+  +G+ 
Sbjct: 11  LAMLLTRVRECELCAGHLPLGARPVL-QMDSRARILIAAQAPGRKVHETGIPFNDASGDR 69

Query: 136 LDKML---QSIEIMRTQIHISMISPWHPPGNR--NLSNIEMEICRPIIMRQIELISPKIL 190
           L   L   + +     Q+ +  +   +P      +L                 L   ++ 
Sbjct: 70  LRAWLGISREVFYDARQVALVPMGFCYPGTGTSGDLPPRPECARAWHGELLPHLQHLQLT 129

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKK 245
           L IG   + +    +A    + +  W            +   HP       L + P    
Sbjct: 130 LVIGQYARAYHLPAEAGTLTEVVHAWRENWPNR-----IPLPHPSPRNNLWLKRNPW--- 181

Query: 246 NTWHALI-TLKKALKNL 261
                LI  L+  +  +
Sbjct: 182 -FEEDLIPMLQARVAEV 197


>gi|241662866|ref|YP_002981226.1| Uracil-DNA glycosylase superfamily protein [Ralstonia pickettii
           12D]
 gi|240864893|gb|ACS62554.1| Uracil-DNA glycosylase superfamily [Ralstonia pickettii 12D]
          Length = 205

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 55/175 (31%), Gaps = 13/175 (7%)

Query: 84  LRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
           +R+  +C   L       + A       ++IIG  P    + +G P++ ++G+ L + LQ
Sbjct: 20  IRACRECKGALAHEPRPVVVAD--RRARVLIIGQAPGRIVHETGIPWNDRSGDRLRQWLQ 77

Query: 142 ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNK 196
                     +I +  +    P    N        C P   R +    P  ++ L +G  
Sbjct: 78  ISYDDFYADRRIAVVPMGFCFPGTGANGDLPPRPECAPRWHRPLLTAMPEVRLTLLVGTY 137

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTWHA 250
            +  + +   +         +               HP    +     K N W  
Sbjct: 138 AQRNYLDV-PRDWTLTDVVRNGPAHDADGRVLFPLPHPSP--RNLAWFKHNPWFD 189


>gi|116627855|ref|YP_820474.1| hypothetical protein STER_1082 [Streptococcus thermophilus LMD-9]
 gi|116101132|gb|ABJ66278.1| Uracil-DNA glycosylase [Streptococcus thermophilus LMD-9]
          Length = 194

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/196 (10%), Positives = 57/196 (29%), Gaps = 18/196 (9%)

Query: 75  CSLHELKSLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
            +L EL   + +           +  + +   +   + I+G  P      SG  ++  +G
Sbjct: 2   ETLEELTQAIMADEQNKTYTEQGIKPLFSI-PKTARINIVGQAPGIRAQESGLYWNDPSG 60

Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLS-----NIEMEICRPIIMRQIELISPK 188
           + L   +        +  +  I P                 +    +          + +
Sbjct: 61  DNLRDWMGVSREEFYESGLFAIVPMDFYFPGQGKSGDLGPRKGFADKWHERVLDLAPNIQ 120

Query: 189 ILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPL 242
           + + +GN  ++++ +  +       +  + +    +        VHP         + P 
Sbjct: 121 LTILVGNYAQHYYLHQKSSTKLTDTVKHYRDYLPDY-----FPLVHPSPRNNIWQAKNPW 175

Query: 243 IKKNTWHALITLKKAL 258
             K     L  L + +
Sbjct: 176 FMKEVLPDLKELVQKI 191


>gi|309782208|ref|ZP_07676937.1| NLP/P60 family protein [Ralstonia sp. 5_7_47FAA]
 gi|308918979|gb|EFP64647.1| NLP/P60 family protein [Ralstonia sp. 5_7_47FAA]
          Length = 205

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 60/188 (31%), Gaps = 16/188 (8%)

Query: 84  LRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
           +R+  +C   L       + A       ++IIG  P    + +G P++ ++G+ L + LQ
Sbjct: 20  IRACRECKGALAHEPRPVVVAD--RRARVLIIGQAPGRIVHETGIPWNDRSGDRLRQWLQ 77

Query: 142 ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNK 196
                     +I +  +    P    N        C P   R +    P  ++ L +G  
Sbjct: 78  ISYDDFYADRRIAVVPMGFCFPGTGANGDLPPRPECAPRWHRPLLTAMPEVRLALLVGTY 137

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTWHA---LI 252
            +  + +   +         +               HP    +     K N W     + 
Sbjct: 138 AQRNYLDV-PRDWTLTDVVRNGPAHDADGRVLFPLPHPSP--RNLAWFKHNPWFDAHIVP 194

Query: 253 TLKKALKN 260
            L+ AL  
Sbjct: 195 ALRAALAE 202


>gi|15673799|ref|NP_267974.1| hypothetical protein L68066 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|12724845|gb|AAK05915.1|AE006412_2 hypothetical protein L68066 [Lactococcus lactis subsp. lactis
           Il1403]
          Length = 193

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 49/167 (29%), Gaps = 17/167 (10%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + IIG  P      S   ++  +G+ L   L        + +   I P       
Sbjct: 32  HKEAKICIIGQAPGIRAQESRLFWNDPSGDRLRDWLGIDRTTFYESNKISILPLDFYFPG 91

Query: 165 NLSNIEMEICRPI---IMRQIELISPKI--LLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
              + ++           + +    P+I   + +G+    ++ N  +      +      
Sbjct: 92  KGKSGDLPPRAGFAQKWHKALLEEMPEIELFILVGSYAIKYYLNLKSSAKTTEVIHDFEA 151

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKNL 261
             P         VHP       L + P  +      L  LKK +  L
Sbjct: 152 YLP----KYFPIVHPSPRNNMWLAKNPWFEPEL---LPELKKRVAQL 191


>gi|85711552|ref|ZP_01042610.1| Uracil-DNA glycosylase [Idiomarina baltica OS145]
 gi|85694704|gb|EAQ32644.1| Uracil-DNA glycosylase [Idiomarina baltica OS145]
          Length = 201

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 58/197 (29%), Gaps = 26/197 (13%)

Query: 77  LHELKSLLRSFHDCHLCS-----TSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
           +   ++ ++   +C LC       +   I         ++I G  P    + SGKPF   
Sbjct: 1   MSAWQTTVQHVRNCSLCEPKLPLGARPVI--QFHPHARILIAGQAPGIRVHRSGKPFDDP 58

Query: 132 TGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP- 187
           +G  L   L   +S      Q  I  +   +P    +        C      Q+    P 
Sbjct: 59  SGERLRAWLGVDKSDFYDARQFAILPMGFCYPGTTSSGDAPPRPECADAWREQLLEQLPH 118

Query: 188 -KILLFIGNKTKNF----FFNNDAQKTYQNLGK-WSNLCTPHSIIPTLATVHPQ-----E 236
            ++ L IG   + +          Q+T     K W            L   HP       
Sbjct: 119 LQLTLAIGQYAQQWHAQQLTGIKLQRTLTERVKNWQAWLEQG----ILPLPHPSPRNNRW 174

Query: 237 LIQYPLIKKNTWHALIT 253
           L + P  +      L  
Sbjct: 175 LAKNPWFEDEVLPELKA 191


>gi|149204661|ref|ZP_01881626.1| hypothetical protein RTM1035_09753 [Roseovarius sp. TM1035]
 gi|149141920|gb|EDM29970.1| hypothetical protein RTM1035_09753 [Roseovarius sp. TM1035]
          Length = 211

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 70/205 (34%), Gaps = 16/205 (7%)

Query: 66  QADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISG 125
            A    +    + +L++ + +   C         +      G  ++I+G  P    +++G
Sbjct: 2   PASRPDKTRSEIEKLQAEITACSVCSDLPLGPRPLFQIG-AGVRILIVGQAPGRRAHLAG 60

Query: 126 KPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQI 182
           + F   +G  L   L   ++      +I I  +    P   R+        C P+   ++
Sbjct: 61  RLFDDASGVRLRNWLGLDEATFRDPEKIAILPMGFCFPGTGRSGDLPPRPECAPLWRARV 120

Query: 183 ELISPKIL--LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
             + P I+  + IG   +++     ++          +  T       L   HP    + 
Sbjct: 121 MALLPDIMLTVVIGRHAQSWHLPEISRLPLAE--AMRDWPTCWPASILLP--HPSP--RN 174

Query: 241 PLI-KKNTW--HALI-TLKKALKNL 261
               ++N W    L+  L+  +  L
Sbjct: 175 MGWFQRNVWFETDLLPVLRARVIKL 199


>gi|75676116|ref|YP_318537.1| uracil-DNA glycosylase superfamily protein [Nitrobacter
           winogradskyi Nb-255]
 gi|74420986|gb|ABA05185.1| uracil-DNA glycosylase superfamily [Nitrobacter winogradskyi
           Nb-255]
          Length = 225

 Score = 50.5 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 40/146 (27%), Gaps = 30/146 (20%)

Query: 88  HDCHLCST--------SLS-------TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131
            DC LC                     + +       ++I+G  P     N +G+PF+G 
Sbjct: 21  RDCPLCPRLVDYRLAVRTREPEWFNAPVPSFGEPDSAVLIVGLAPGVQGANRTGRPFTGD 80

Query: 132 T-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177
             G++L   L                        IS      PP N+ L          +
Sbjct: 81  YAGDLLYATLLKYGFAAGRYQARPDDGLKLIDCRISNAVRCVPPQNKPLPAEINTCRAFL 140

Query: 178 IMRQIELISPKILLFIGNKTKNFFFN 203
                 +   + ++ +G    +    
Sbjct: 141 SATLAAMPRLQAVVALGRVAHDSAVK 166


>gi|306845249|ref|ZP_07477825.1| uracil-DNA glycosylase superfamily protein [Brucella sp. BO1]
 gi|306274408|gb|EFM56215.1| uracil-DNA glycosylase superfamily protein [Brucella sp. BO1]
          Length = 223

 Score = 50.5 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/181 (12%), Positives = 46/181 (25%), Gaps = 37/181 (20%)

Query: 86  SFHDCHL--------------CSTSLSTICATQ-TEGQDLMIIGYTPSDSD-NISGKPFS 129
           +   C                   +          E   L+I+G  P     N +G+PF+
Sbjct: 8   NCSICPRLHAFLQEWRQKEPAWHNAPVPPFLPGSDEDVRLLIVGLAPGLRGANRTGRPFT 67

Query: 130 GKT-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICR 175
           G   G +L   L                        I       PP N+ + +      +
Sbjct: 68  GDYAGELLYSTLCEFGFATGKFEARPDDSLRLLDACIVNAVRCVPPENKPVGSEINNCRQ 127

Query: 176 PIIMRQIELISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATV 232
            +        +   ++ +G                +     GK +++      +   ++ 
Sbjct: 128 FLTPMLTRFPNLDAVVTLGTIAHQSTVRALGVPVSRHPFGHGKTTDI----GPLRIFSSY 183

Query: 233 H 233
           H
Sbjct: 184 H 184


>gi|300741850|ref|ZP_07071871.1| uracil DNA glycosylase family protein [Rothia dentocariosa M567]
 gi|300381035|gb|EFJ77597.1| uracil DNA glycosylase family protein [Rothia dentocariosa M567]
          Length = 201

 Score = 50.5 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/167 (10%), Positives = 48/167 (28%), Gaps = 15/167 (8%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
           +    ++++G  P      +  P++  +G +L   L   +       +  + P       
Sbjct: 35  SARSRIILVGQAPGRIAQETRIPWNDVSGRLLRTWLSVSDDEFYNPELFALMPMDFYYPG 94

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    R     +  +   ++ + +G   + ++   D     +     +  
Sbjct: 95  KGKHGDLPPRKDFAPRWHPRLRAMMPHAQLTILVGAYAQKYYL--DGVSAPRLRSNLTET 152

Query: 220 CTPHSIIP--TLATVHPQEL-----IQYPLIKKNTWHALIT-LKKAL 258
                      +  VHP  L      + P  +      L   ++K L
Sbjct: 153 VAHAEDYLPGFVPLVHPSPLNIGWRKRNPWFEAENIPDLRERVRKIL 199


>gi|261855091|ref|YP_003262374.1| hypothetical protein Hneap_0471 [Halothiobacillus neapolitanus c2]
 gi|261835560|gb|ACX95327.1| conserved hypothetical protein [Halothiobacillus neapolitanus c2]
          Length = 193

 Score = 50.5 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 56/184 (30%), Gaps = 29/184 (15%)

Query: 80  LKSLLRSFHDCHLCSTSLSTICA-----TQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           L   +R+   C       +           +    L+I G  P    + SG PF   +G+
Sbjct: 7   LIDEVRACRICQ-----DNLPFPPRPILQFSPSARLLIAGQAPGKKAHQSGVPFDDASGD 61

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIELISP 187
            L   L   ++       + +  +    P     G+           R  ++    L   
Sbjct: 62  RLRGWLGLSRAQFYDEQTVALLPMGFCFPGTGTSGDLPPRPECAPAWRSALLD--ALTHL 119

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPL 242
           +  + IG   + + F    Q   + +  W        ++P     HP       L + P 
Sbjct: 120 EFTIVIGRYAQAYHFGTRRQSLTEQVQAWREHWPEKVLLP-----HPSPRNQLWLKRNPW 174

Query: 243 IKKN 246
            +++
Sbjct: 175 FERD 178


>gi|326318085|ref|YP_004235757.1| Uracil-DNA glycosylase superfamily [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323374921|gb|ADX47190.1| Uracil-DNA glycosylase superfamily [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 199

 Score = 50.5 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 59/185 (31%), Gaps = 16/185 (8%)

Query: 74  ACSLHELKSLLRSFHDCHLCSTSL----STICATQTEGQDLMIIGYTPSDSDNISGKPFS 129
              L +L  LLRS   C LC+ SL      +    + G  ++I G  P    + SG PF 
Sbjct: 2   PRPLPDLAPLLRSVRSCTLCAGSLPLGPRPVL-QASAGARILIAGQAPGRKVHASGIPFD 60

Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186
             +G  L   +   +       +I I  +   +P   R+        C     + +    
Sbjct: 61  DVSGERLRDWMGVDRETFYDPGRIAIVPMGFCYPGTGRSGDLPPRPECAATWRKPLLDAL 120

Query: 187 P--KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI- 243
           P  ++ + +G     +                 +       +  L   HP    +     
Sbjct: 121 PGIRLTIVLGAYALAWHVRRTPAPLSLT-DAVQDWRRGAPGLWVLP--HPSP--RNNGWL 175

Query: 244 KKNTW 248
           K++ W
Sbjct: 176 KRHPW 180


>gi|316934151|ref|YP_004109133.1| Uracil-DNA glycosylase superfamily [Rhodopseudomonas palustris
           DX-1]
 gi|315601865|gb|ADU44400.1| Uracil-DNA glycosylase superfamily [Rhodopseudomonas palustris
           DX-1]
          Length = 224

 Score = 50.5 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 48/179 (26%), Gaps = 37/179 (20%)

Query: 88  HDCHLC--------STSLS-------TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131
            DC LC                     + +       L+I+G  P     N +G+PF+G 
Sbjct: 21  RDCPLCPRLAEFRSEARAREPGWFNAPVSSFGGTDASLLIVGLAPGLQGANRTGRPFTGD 80

Query: 132 T-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177
             G++L   L                        IS      PP N+ L        R +
Sbjct: 81  YAGDLLYATLIEYGFASGQYQARPDDSLRLVGCRISNAVRCVPPQNKPLPVEINTCRRFL 140

Query: 178 IMRQIELISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
           I     +   + ++ +G    +         A +     G           +    + H
Sbjct: 141 IATIDAMPKLRAIVLLGRIAHDSTLKALGLRAAQAPFGHGAVHEA----GRLRLYDSYH 195


>gi|148560230|ref|YP_001258634.1| uracil-DNA glycosylase superfamily protein [Brucella ovis ATCC
           25840]
 gi|148371487|gb|ABQ61466.1| uracil-DNA glycosylase superfamily [Brucella ovis ATCC 25840]
          Length = 223

 Score = 50.5 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 43/147 (29%), Gaps = 22/147 (14%)

Query: 105 TEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEI-------------MRTQ 149
            E   L+I+G  P     N +G+PF+G   G +L   L                      
Sbjct: 42  DEDVRLLIVGLAPGLRGANRTGRPFTGDYAGELLYSTLCEFGFATGKFEARPDDSLRLLD 101

Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FFNNDA 206
             I       PP N+ + +      + +        +   ++ +G               
Sbjct: 102 ACIVNAVRCVPPENKPVGSEINNCRQFLTPMLTHFPNLDAVVTLGTIAHQSTVRALGVPV 161

Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVH 233
            +     GK +++      +   ++ H
Sbjct: 162 SRHPFGHGKATDI----GPLRIFSSYH 184


>gi|108563060|ref|YP_627376.1| hypothetical protein HPAG1_0635 [Helicobacter pylori HPAG1]
 gi|107836833|gb|ABF84702.1| hypothetical protein HPAG1_0635 [Helicobacter pylori HPAG1]
          Length = 209

 Score = 50.5 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/184 (12%), Positives = 55/184 (29%), Gaps = 13/184 (7%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            ++   + + + C     S   +         L  I  TP    +      +     ML+
Sbjct: 37  KQVHEGIENCNLCKRHQHSK-PVIGLFNPTSKLAFITLTP--MLDSQLNFLNNLKAAMLE 93

Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++Q           I  +       N      E+  C   ++ Q++  + K+++  G  
Sbjct: 94  SIIQKVFNYPLKDCSILSLLKC--DSNSLNLEEEINACLFHLIWQLDNSASKVIVVFGEI 151

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                 N   +++                   L+T   +++++ P +KK          +
Sbjct: 152 LPKRLLNLSKEES-------FGCIVSLKTKHFLSTHALEDMLKNPTLKKEALAHFKIALQ 204

Query: 257 ALKN 260
            L  
Sbjct: 205 FLNQ 208


>gi|296115128|ref|ZP_06833769.1| hypothetical protein GXY_05086 [Gluconacetobacter hansenii ATCC
           23769]
 gi|295978229|gb|EFG84966.1| hypothetical protein GXY_05086 [Gluconacetobacter hansenii ATCC
           23769]
          Length = 196

 Score = 50.5 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/184 (11%), Positives = 50/184 (27%), Gaps = 30/184 (16%)

Query: 79  ELKSLLRSFHDCHLCSTSLSTICATQT-------EGQDLMIIGYTPSDSDNISGKPFSGK 131
            L+ L+     C  C+     +                ++I    P    + +G+ F+  
Sbjct: 9   ALERLVTEIRACTTCAN----VLPLGPRPILHVSPTARILIASQAPGTRVHETGQSFNDA 64

Query: 132 TGNMLDKML---QSIEIMRTQIHISMISPW---HPPGNRNLSNIEMEICRPIIMRQIELI 185
           +G+ L   L   ++      +I I  +        P   +                  + 
Sbjct: 65  SGDRLRGWLGIDRATFYDSARIAIMPMGMCYPGRLPKGGDCPPRRECAPLWRERVLALMP 124

Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII--PTLATVHPQELIQYPLI 243
             ++ L +G+  +N              GK  +    +           HP    +    
Sbjct: 125 DIRLTLLVGSYAQNHVLGP---------GKVEDRVRHYRDYLPRFFPLPHPSW--RTGAW 173

Query: 244 KKNT 247
           ++ +
Sbjct: 174 ERRS 177


>gi|114707278|ref|ZP_01440175.1| hypothetical protein FP2506_03630 [Fulvimarina pelagi HTCC2506]
 gi|114537159|gb|EAU40286.1| hypothetical protein FP2506_03630 [Fulvimarina pelagi HTCC2506]
          Length = 212

 Score = 50.5 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 64/202 (31%), Gaps = 23/202 (11%)

Query: 79  ELKSLLRSFHDC-------HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
            L+ ++ +   C        L     + + A       +++ G  P +  + + KPF+  
Sbjct: 13  ALQRIIETCRICAENPIGEPL-PIEPNPVLALSDT-ARILVAGQAPGNLADKTSKPFNDP 70

Query: 132 TGNMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRN---LSNIEMEICRPIIMRQIELI 185
           +G  L   +     +    T++ I  +    P  +         +             + 
Sbjct: 71  SGIRLRDWMGIGPELFYDSTRVAILPMGFCFPGYDAKGGDKPPRKECRLTWHERAMAAMP 130

Query: 186 SPKILLFIGNKTKN-FFFNNDAQKTYQNLGKWSNLCTPHSII-PTLATVHPQELIQYPLI 243
             +++L IG   ++        +   + +  W ++          +   HP    +    
Sbjct: 131 QIELVLAIGAYAQSFHIAKGRGRTLTETVMNWRDILAGGGKYAAVIPLPHPSW--RNNGW 188

Query: 244 -KKNTW--HALI-TLKKALKNL 261
            +KN W    L+  L+  +  L
Sbjct: 189 LRKNPWFGEDLLPELRTQVARL 210


>gi|281492430|ref|YP_003354410.1| uracil DNA glycosylase superfamily protein [Lactococcus lactis
           subsp. lactis KF147]
 gi|281376094|gb|ADA65585.1| Uracil DNA glycosylase superfamily protein [Lactococcus lactis
           subsp. lactis KF147]
          Length = 193

 Score = 50.5 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 17/167 (10%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + IIG  P      S   ++  +G+ L   L        + +   I P       
Sbjct: 32  HKEAKICIIGQAPGIRAQESRLFWNDPSGDRLRDWLGIDRTTFYESNKISILPLDFYFPG 91

Query: 165 NLSNIEMEICRPI---IMRQIELISPKI--LLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
              + ++           + +    P+I   + +G+    ++ N  +      + +    
Sbjct: 92  KGKSGDLPPRAGFAQKWHKALLEEMPEIELFILVGSYAIKYYLNLKSSAKTTEVIRDFEA 151

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKNL 261
             P         VHP       L + P  +      L  LKK +  L
Sbjct: 152 YLP----KYFPLVHPSPRNNMWLAKNPWFEPEL---LPELKKRVAQL 191


>gi|319408275|emb|CBI81928.1| conserved hypothetical protein [Bartonella schoenbuchensis R1]
          Length = 226

 Score = 50.5 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 44/151 (29%), Gaps = 22/151 (14%)

Query: 101 CATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEIMRTQIH------- 151
            +       L+I+G  P     N +G+PF+G   G +L   L+     +           
Sbjct: 50  PSKGAATTRLLIVGLAPGLRGANRTGRPFTGDYAGLLLYSTLKKFGFAQGTFEERPDDSL 109

Query: 152 ------ISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FF 202
                 I       PP N+  S                L   K ++ +G    +      
Sbjct: 110 ELIDAAIVNSVRCVPPENKPTSTEINTCRYFFAPLLTNLPQLKAVITLGAIAHHSTIRAL 169

Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
           N    +     G  +N+      +   ++ H
Sbjct: 170 NAKVPEHPFGHGAINNI----GRLRIFSSYH 196


>gi|260459406|ref|ZP_05807661.1| conserved hypothetical protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259034960|gb|EEW36216.1| conserved hypothetical protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 224

 Score = 50.5 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 63/202 (31%), Gaps = 22/202 (10%)

Query: 76  SLHELKSLLRSFHDC-------HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128
            L    + +R+   C        L       +    +    ++I    P    ++SG PF
Sbjct: 23  ELDSFAAAVRACRICVENPIGKPL-PHEPRPVL-RPSSSARILIASQAPGTKVHLSGMPF 80

Query: 129 SGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSN-IEMEICRPIIMRQIEL 184
           +  +G+ L   L           +  I  +    P  +    +      C P     +  
Sbjct: 81  TDASGDRLRNWLGVTSDEFYDTEKFAIVPMGFCFPGQDAKGGDLPPRRECAPAWRAPLMA 140

Query: 185 ISPKI--LLFIGNKTKNFFFN-NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241
           + P+I  +L IG   +++           + +  W  +         L   HP    +  
Sbjct: 141 LMPRIDLVLTIGIYAQSWHMGAARRPSLTETVRDWRAIWENSVGAKVLPLPHPSW--RNT 198

Query: 242 LI-KKNTWH--ALI-TLKKALK 259
              K+N W    L+  L+  ++
Sbjct: 199 GWLKQNPWFEMDLLPFLRSEIR 220


>gi|207091803|ref|ZP_03239590.1| hypothetical protein HpylHP_01476 [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 183

 Score = 50.5 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 57/176 (32%), Gaps = 13/176 (7%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            ++   + + + C     S   +         L  I  TP    +      S     ML+
Sbjct: 20  KQVHEGIENCNLCKRHQHSK-PVIGLFNPTSKLAFITLTP--MLDSQLNFLSNLKAAMLE 76

Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++Q           I  +       N      E+  C   +  Q++  + K+++  G  
Sbjct: 77  SIIQKVFNYPLKDCSILSLLKC--DSNSLNLEEEINACLFHLTWQLDNSASKVIVVFGEI 134

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALI 252
                 N       ++ G+  +L T H     L+T   +++++ P +KK       
Sbjct: 135 LPKRLLNLSK---EESFGRIVSLKTKH----FLSTHALEDMLKNPTLKKEALAHFK 183


>gi|311111743|ref|YP_003982965.1| uracil-DNA glycosylase [Rothia dentocariosa ATCC 17931]
 gi|310943237|gb|ADP39531.1| uracil-DNA glycosylase [Rothia dentocariosa ATCC 17931]
          Length = 201

 Score = 50.5 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/167 (10%), Positives = 48/167 (28%), Gaps = 15/167 (8%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
           +    ++++G  P      +  P++  +G +L   L   +       +  + P       
Sbjct: 35  SARSRIILVGQAPGRIAQETRIPWNDVSGRLLRTWLSVSDDEFYNPELFALMPMDFYYPG 94

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    R     +  +   ++ + +G   + ++   D     +     +  
Sbjct: 95  KGKHGDLPPRKDFAPRWHPRLRAMMPHAQLTILVGAYAQKYYL--DGVSAPRLRSNLTET 152

Query: 220 CTPHSIIP--TLATVHPQEL-----IQYPLIKKNTWHALIT-LKKAL 258
                      +  VHP  L      + P  +      L   ++K L
Sbjct: 153 VAHAEDYLPGFVPLVHPSPLNIGWRKRNPWFEAENIPDLRERVRKIL 199


>gi|254718791|ref|ZP_05180602.1| Uracil-DNA glycosylase superfamily protein [Brucella sp. 83/13]
 gi|265983771|ref|ZP_06096506.1| uracil-DNA glycosylase superfamily protein [Brucella sp. 83/13]
 gi|306837510|ref|ZP_07470385.1| uracil-DNA glycosylase superfamily protein [Brucella sp. NF 2653]
 gi|264662363|gb|EEZ32624.1| uracil-DNA glycosylase superfamily protein [Brucella sp. 83/13]
 gi|306407402|gb|EFM63606.1| uracil-DNA glycosylase superfamily protein [Brucella sp. NF 2653]
          Length = 223

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/181 (12%), Positives = 48/181 (26%), Gaps = 37/181 (20%)

Query: 86  SFHDCHL--------------CSTSLSTICATQ-TEGQDLMIIGYTPSDSD-NISGKPFS 129
           +   C                   +      +   E   L+I+G  P     N +G+PF+
Sbjct: 8   NCSICPRLHAFLQEWRQKEPAWHNAPVPPFLSGSDEDVRLLIVGLAPGLRGANRTGRPFT 67

Query: 130 GKT-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICR 175
           G   G +L   L                        I       PP N+ + +      +
Sbjct: 68  GDYAGELLYSTLCEFGFATGKFEARPDDSLRLLDACIVNAVRCVPPENKPVGSEINNCRQ 127

Query: 176 PIIMRQIELISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATV 232
            +    +   +   ++ +G                +     GK +++      +   ++ 
Sbjct: 128 FLTPMLMRFPNLDAVVTLGTIAHQSTVRALGVPVSRLPFGHGKATDI----GPLRIFSSY 183

Query: 233 H 233
           H
Sbjct: 184 H 184


>gi|158424988|ref|YP_001526280.1| hypothetical protein AZC_3364 [Azorhizobium caulinodans ORS 571]
 gi|158331877|dbj|BAF89362.1| hypothetical protein [Azorhizobium caulinodans ORS 571]
          Length = 232

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 63/222 (28%), Gaps = 23/222 (10%)

Query: 60  HSPLVQQADSIAQKACSLHELKSLLRSFHDC---HLCSTSLS--TICATQTEGQDLMIIG 114
              L  + +        L +L + +R+   C    L              +    ++I  
Sbjct: 7   RPNLEAELEERGAVDPPLADLLADIRACRRCVEAPLGRPMPHEPRPVLRASSTARILIAS 66

Query: 115 YTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRN--LSNI 169
             P    +++G  F   +G+ L + +   +++     QI I  +    P  + N      
Sbjct: 67  QAPGTKVHLTGLTFHDASGDRLRQWMGVSRAVFYDTAQIAIVPMGFCFPGQDANGGDLPP 126

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFF----FNND---AQKTYQNLGKWSNLCTP 222
             E       R    +    L+    +    +       +        Q +  W  +   
Sbjct: 127 RRECRATWHDRLFAALPAFDLILAIGRPAQLYHLKRLGREAQIGDSLTQTVANWRQVRAA 186

Query: 223 HSIIPTLATVHPQELIQYPLI-KKNTW--HALI-TLKKALKN 260
                  A  HP    +     K+N W    L+  L+  +  
Sbjct: 187 AERPRVYALPHPSW--RNTGWLKRNPWFEQDLLPELRADIAQ 226


>gi|170739779|ref|YP_001768434.1| uracil-DNA glycosylase superfamily protein [Methylobacterium sp.
           4-46]
 gi|168194053|gb|ACA16000.1| Uracil-DNA glycosylase superfamily [Methylobacterium sp. 4-46]
          Length = 221

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 58/153 (37%), Gaps = 28/153 (18%)

Query: 75  CSLHELKSLLRSFHDCH--LCSTSLST-----------ICATQTEGQDLMIIGYTPSDSD 121
             L  L   +R+   C   L    ++            + +       LM++G  P  ++
Sbjct: 3   ADLIALDLEMRACVRCAQVLQKHPVNPPRDASPVVPRPVFS-PPMRAPLMLVGQAPGITE 61

Query: 122 NISGKPFSGKTGN-----MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE------ 170
             +G PFSG+ G       +D  L+  E  R  ++ +  +   P    N +  E      
Sbjct: 62  YGTGTPFSGQAGGGARALFVDCGLRESEFDR-AVYQTSAAKCFPGRRLNAARWEDRPPCA 120

Query: 171 --MEICRPIIMRQIELISPKILLFIGNKTKNFF 201
             ++ C   + RQIE++SP +++ +G       
Sbjct: 121 AMLQNCGGFLRRQIEMVSPVVIVAMGGVAIKMM 153


>gi|288905133|ref|YP_003430355.1| hypothetical protein GALLO_0932 [Streptococcus gallolyticus UCN34]
 gi|288731859|emb|CBI13424.1| Conserved hypothetical protein [Streptococcus gallolyticus UCN34]
          Length = 194

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 48/166 (28%), Gaps = 15/166 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + I+G  P      SG  ++  +G+ L K L     +     +  + P       
Sbjct: 32  PKTARINIVGQAPGIRAQESGLYWNDPSGDNLRKWLGVDREIFYDSGLFAVVPMDYYFPG 91

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    +          + ++ + +G+  + ++    +  T     K    
Sbjct: 92  TGKSGDLPPRKGFAEKWHKRTLAFAPNIELHILVGSYAQRYYLQQKSSATLTETVKHYRA 151

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKALK 259
             P         VHP         + P   K     L   +K+ L+
Sbjct: 152 YLPE----FFPLVHPSPRNNLWQARNPWFAKEVIPDLQKYVKEILE 193


>gi|22537375|ref|NP_688226.1| hypothetical protein SAG1218 [Streptococcus agalactiae 2603V/R]
 gi|22534248|gb|AAN00099.1|AE014247_14 conserved hypothetical protein [Streptococcus agalactiae 2603V/R]
          Length = 194

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/161 (13%), Positives = 59/161 (36%), Gaps = 16/161 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPP 161
            +   + I+G  P      +   +  K+G+ L + L   +       +  +  +  ++P 
Sbjct: 32  PKTARINIVGQAPGLKTQEARLYWKDKSGDRLRQWLGVDEETFYHSGKFAVLPLDFYYPG 91

Query: 162 GNRNLS--NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSN 218
             ++      +    +   +   E+ + ++ L +G  T+ ++  + A K   + +  + +
Sbjct: 92  KGKSGDLSPRKGFAEKWHPLILKEMPNVQLTLLVGQYTQKYYLGSSAHKNLTETVKAYKD 151

Query: 219 LCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITL 254
               +     L  VHP       L + P  +K+    L  +
Sbjct: 152 YLPDY-----LPLVHPSPRNQIWLKKNPWFEKDLIVDLQKI 187


>gi|87119969|ref|ZP_01075865.1| hypothetical protein MED121_01975 [Marinomonas sp. MED121]
 gi|86164671|gb|EAQ65940.1| hypothetical protein MED121_01975 [Marinomonas sp. MED121]
          Length = 196

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 72/204 (35%), Gaps = 30/204 (14%)

Query: 77  LHELKSLLRSFHDCHLCST----SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
           + EL  L+     C LC       +  +     +   ++I G  P    + SG PF   +
Sbjct: 1   MAELIRLIEDIKACKLCEAHLEHGVRPVV-QLNKTAKILIAGQAPGRKVHTSGIPFDDAS 59

Query: 133 GNMLDKML---QSIEIMRTQIHISMISPWHP--------PGNRNLSNIEMEICRPIIMRQ 181
           G+ L   +   +      ++I I  +   +P         G+              ++  
Sbjct: 60  GDRLRAWMGIDKDTFYDDSKIAILPMGFCYPGSYKGKGKSGDLPPRPECANTWHQNVLA- 118

Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241
             L   +++L IG   ++++ +N+       + +W      +  +P     HP    +  
Sbjct: 119 -LLTQVELVLVIGQYAQDYYLDNNVTV-TACVAEWEKHWPHYLPLP-----HPSP--RNN 169

Query: 242 LI-KKNTW--HALI-TLKKALKNL 261
           +   KNTW    ++  L+  +  L
Sbjct: 170 IWLAKNTWFEADILPVLQSRVATL 193


>gi|154251536|ref|YP_001412360.1| uracil-DNA glycosylase superfamily protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154155486|gb|ABS62703.1| Uracil-DNA glycosylase superfamily [Parvibaculum lavamentivorans
           DS-1]
          Length = 178

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 49/149 (32%), Gaps = 15/149 (10%)

Query: 108 QDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ---SIEIMRTQIHISMISPWHPPGNR 164
             L I+G  P    + SG PF+  +G+ L   +          ++I I  +    P  + 
Sbjct: 16  ARLCIVGQAPGTRVHASGTPFTDPSGDRLRDWMGVTPEEFYDISRIAIIPMGFCFPGLDA 75

Query: 165 NLSN-IEMEICRPIIMRQIELISPK--ILLFIGNKTKNFFFNN-DAQKTYQNLGKWSNLC 220
              +      C     R +  + P+  + L +G   + +       +     +  W    
Sbjct: 76  KGGDLPPRRECADHWRRDLFELMPQLELTLLVGQYAQAWHLGKARKESLTATVAAWREYL 135

Query: 221 TPHSIIPTLATVHPQELIQYPLI-KKNTW 248
             H  +P     HP    +     KK+ W
Sbjct: 136 PRHLPLP-----HPSW--RNNAWIKKHPW 157


>gi|306820095|ref|ZP_07453743.1| uracil DNA glycosylase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304551873|gb|EFM39816.1| uracil DNA glycosylase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 196

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/176 (11%), Positives = 54/176 (30%), Gaps = 35/176 (19%)

Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRN 165
               ++++G  P      S + ++ ++G  L   +   E +     +  I P        
Sbjct: 34  TNSRILVVGQAPGIKAMESRRCWNDQSGKNLRNWMGIDEDIFYNSGLIGIVPMDFYYPGK 93

Query: 166 L-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNL 219
                    +    +          + K+++ +G+ ++N++   + +KT  Q +  +   
Sbjct: 94  GKSGDLPPRKGFAQKWHGKILEHYKNIKLIILVGSYSQNYYLGKNKKKTLTQTVQNYKEY 153

Query: 220 CTPHSIIPTLATVHPQELIQY---------------PLIKKNTWHALITLKKALKN 260
              +        VHP    +                P +K         +++ L  
Sbjct: 154 LPTY-----FPIVHPSP--RNIIWQIKNPWFGNEVVPALK-------KEVRRILDE 195


>gi|289580314|ref|YP_003478780.1| hypothetical protein Nmag_0633 [Natrialba magadii ATCC 43099]
 gi|289529867|gb|ADD04218.1| conserved hypothetical protein [Natrialba magadii ATCC 43099]
          Length = 221

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 53/185 (28%), Gaps = 32/185 (17%)

Query: 97  LSTICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQSIEIM-------- 146
            + +        D  +IG  P       +G PF+  + GN +  +L+  +I         
Sbjct: 35  RTAVFGYGDANADFHVIGDHPGVHGGKRTGVPFTEIENGNAIQDVLRDPDIDFASGPRDQ 94

Query: 147 --RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204
                 ++S +     P     +  +          ++  I+  ILL +G +  +     
Sbjct: 95  PVLENCYLSYVHMCSLPDGHQPTASDYAELERYFDAELRAINAHILLPVGEQATDHVLRE 154

Query: 205 DAQKTYQN---LGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA------LITLK 255
              +  +    +               +         + P      W        L TL+
Sbjct: 155 YTTQRRRIDLNMVDLHATEIRGRGFMVVPI-------RNPTE----WDDGDREAILETLR 203

Query: 256 KALKN 260
           + L +
Sbjct: 204 EILAS 208


>gi|325978106|ref|YP_004287822.1| Uracil-DNA glycosylase-like [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|325178034|emb|CBZ48078.1| Uracil-DNA glycosylase-like [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 194

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 48/166 (28%), Gaps = 15/166 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + I+G  P      SG  ++  +G+ L K L     +     +  + P       
Sbjct: 32  PKTARINIVGQAPGIRAQESGLYWNDPSGDNLRKWLGVDREIFYDSGLFAVVPMDYYFPG 91

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    +          + ++ + +G+  + ++    +  T     K    
Sbjct: 92  TGKSGDLPPRKGFAEKWHKRTLAFAPNIELHILVGSYAQRYYLQQKSSATLTETVKHYRA 151

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKALK 259
             P         VHP         + P   K     L   +K+ L+
Sbjct: 152 YLPE----FFPLVHPSPRNNLWQARNPWFAKEVIPDLQKHVKEILE 193


>gi|109947599|ref|YP_664827.1| hypothetical protein Hac_1064 [Helicobacter acinonychis str.
           Sheeba]
 gi|109714820|emb|CAJ99828.1| conserved hypothetical protein [Helicobacter acinonychis str.
           Sheeba]
          Length = 196

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 60/183 (32%), Gaps = 13/183 (7%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
            ++   + + + C     S   +         +  I  TP    +      +     ML+
Sbjct: 24  KQVHEGIENCNLCKRYQHSKPIV-GLLNAQSKITFITLTP--MLDSQLNFLNNLKALMLE 80

Query: 138 KMLQS-IEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
            ++Q           I  +       N      E+  C P +  Q++  + K+++  G  
Sbjct: 81  SIIQKVFGYSLKDCTILSLLKC--DSNSLNLEEEINACLPHLTWQLDNSASKVIIIFGQS 138

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                 N       ++ G+  +L T +     L+T   +++++ P +KK          +
Sbjct: 139 LPKRLLNLSK---EESFGRIVSLKTKN----FLSTYALEDMLKNPTLKKEVLTHFKIALQ 191

Query: 257 ALK 259
            L 
Sbjct: 192 FLN 194


>gi|17987582|ref|NP_540216.1| putative cytoplasmic protein [Brucella melitensis bv. 1 str. 16M]
 gi|23501535|ref|NP_697662.1| phage SPO1 DNA polymerase-like protein [Brucella suis 1330]
 gi|62289608|ref|YP_221401.1| SPO1 DNA polymerase-like protein [Brucella abortus bv. 1 str.
           9-941]
 gi|82699536|ref|YP_414110.1| uracil-DNA glycosylase superfamily protein [Brucella melitensis
           biovar Abortus 2308]
 gi|161618619|ref|YP_001592506.1| uracil-DNA glycosylase superfamily protein [Brucella canis ATCC
           23365]
 gi|163842920|ref|YP_001627324.1| uracil-DNA glycosylase superfamily protein [Brucella suis ATCC
           23445]
 gi|189023862|ref|YP_001934630.1| Uracil-DNA glycosylase superfamily [Brucella abortus S19]
 gi|225852169|ref|YP_002732402.1| uracil-DNA glycosylase superfamily protein [Brucella melitensis
           ATCC 23457]
 gi|237815103|ref|ZP_04594101.1| cytoplasmic protein [Brucella abortus str. 2308 A]
 gi|254688925|ref|ZP_05152179.1| Uracil-DNA glycosylase superfamily protein [Brucella abortus bv. 6
           str. 870]
 gi|254693407|ref|ZP_05155235.1| Uracil-DNA glycosylase superfamily protein [Brucella abortus bv. 3
           str. Tulya]
 gi|254697059|ref|ZP_05158887.1| Uracil-DNA glycosylase superfamily protein [Brucella abortus bv. 2
           str. 86/8/59]
 gi|254701437|ref|ZP_05163265.1| Uracil-DNA glycosylase superfamily protein [Brucella suis bv. 5
           str. 513]
 gi|254707642|ref|ZP_05169470.1| Uracil-DNA glycosylase superfamily protein [Brucella pinnipedialis
           M163/99/10]
 gi|254709776|ref|ZP_05171587.1| Uracil-DNA glycosylase superfamily protein [Brucella pinnipedialis
           B2/94]
 gi|254713778|ref|ZP_05175589.1| Uracil-DNA glycosylase superfamily protein [Brucella ceti
           M644/93/1]
 gi|254717165|ref|ZP_05178976.1| Uracil-DNA glycosylase superfamily protein [Brucella ceti M13/05/1]
 gi|254729956|ref|ZP_05188534.1| Uracil-DNA glycosylase superfamily protein [Brucella abortus bv. 4
           str. 292]
 gi|256031266|ref|ZP_05444880.1| Uracil-DNA glycosylase superfamily protein [Brucella pinnipedialis
           M292/94/1]
 gi|256044346|ref|ZP_05447250.1| Uracil-DNA glycosylase superfamily protein [Brucella melitensis bv.
           1 str. Rev.1]
 gi|256113189|ref|ZP_05454057.1| Uracil-DNA glycosylase superfamily protein [Brucella melitensis bv.
           3 str. Ether]
 gi|256159376|ref|ZP_05457158.1| Uracil-DNA glycosylase superfamily protein [Brucella ceti
           M490/95/1]
 gi|256254674|ref|ZP_05460210.1| Uracil-DNA glycosylase superfamily protein [Brucella ceti B1/94]
 gi|256257173|ref|ZP_05462709.1| Uracil-DNA glycosylase superfamily protein [Brucella abortus bv. 9
           str. C68]
 gi|256264319|ref|ZP_05466851.1| uracil-DNA glycosylase superfamily [Brucella melitensis bv. 2 str.
           63/9]
 gi|256369086|ref|YP_003106594.1| phage SPO1 DNA polymerase-related protein [Brucella microti CCM
           4915]
 gi|260168402|ref|ZP_05755213.1| phage SPO1 DNA polymerase-related protein [Brucella sp. F5/99]
 gi|260545635|ref|ZP_05821376.1| uracil-DNA glycosylase superfamily protein [Brucella abortus NCTC
           8038]
 gi|260563698|ref|ZP_05834184.1| uracil-DNA glycosylase superfamily protein [Brucella melitensis bv.
           1 str. 16M]
 gi|260566770|ref|ZP_05837240.1| uracil-DNA glycosylase superfamily protein [Brucella suis bv. 4
           str. 40]
 gi|260754411|ref|ZP_05866759.1| uracil-DNA glycosylase superfamily protein [Brucella abortus bv. 6
           str. 870]
 gi|260757630|ref|ZP_05869978.1| uracil-DNA glycosylase superfamily protein [Brucella abortus bv. 4
           str. 292]
 gi|260761457|ref|ZP_05873800.1| uracil-DNA glycosylase superfamily protein [Brucella abortus bv. 2
           str. 86/8/59]
 gi|260883439|ref|ZP_05895053.1| uracil-DNA glycosylase superfamily protein [Brucella abortus bv. 9
           str. C68]
 gi|261213657|ref|ZP_05927938.1| uracil-DNA glycosylase superfamily protein [Brucella abortus bv. 3
           str. Tulya]
 gi|261218982|ref|ZP_05933263.1| uracil-DNA glycosylase superfamily protein [Brucella ceti M13/05/1]
 gi|261221850|ref|ZP_05936131.1| uracil-DNA glycosylase superfamily protein [Brucella ceti B1/94]
 gi|261315136|ref|ZP_05954333.1| uracil-DNA glycosylase superfamily protein [Brucella pinnipedialis
           M163/99/10]
 gi|261317308|ref|ZP_05956505.1| uracil-DNA glycosylase superfamily protein [Brucella pinnipedialis
           B2/94]
 gi|261321519|ref|ZP_05960716.1| uracil-DNA glycosylase superfamily protein [Brucella ceti
           M644/93/1]
 gi|261751976|ref|ZP_05995685.1| uracil-DNA glycosylase superfamily protein [Brucella suis bv. 5
           str. 513]
 gi|261757863|ref|ZP_06001572.1| uracil-DNA glycosylase superfamily [Brucella sp. F5/99]
 gi|265988347|ref|ZP_06100904.1| uracil-DNA glycosylase superfamily protein [Brucella pinnipedialis
           M292/94/1]
 gi|265990760|ref|ZP_06103317.1| uracil-DNA glycosylase superfamily protein [Brucella melitensis bv.
           1 str. Rev.1]
 gi|265994596|ref|ZP_06107153.1| uracil-DNA glycosylase superfamily protein [Brucella melitensis bv.
           3 str. Ether]
 gi|265997814|ref|ZP_06110371.1| uracil-DNA glycosylase superfamily protein [Brucella ceti
           M490/95/1]
 gi|294852013|ref|ZP_06792686.1| uracil-DNA glycosylase superfamily protein [Brucella sp. NVSL
           07-0026]
 gi|297248020|ref|ZP_06931738.1| uracil-DNA glycosylase superfamily protein [Brucella abortus bv. 5
           str. B3196]
 gi|17983288|gb|AAL52480.1| hypothetical cytosolic protein [Brucella melitensis bv. 1 str. 16M]
 gi|23347445|gb|AAN29577.1| phage SPO1 DNA polymerase-related protein [Brucella suis 1330]
 gi|62195740|gb|AAX74040.1| SPO1 DNA polymerase-related protein [Brucella abortus bv. 1 str.
           9-941]
 gi|82615637|emb|CAJ10624.1| Uracil-DNA glycosylase superfamily [Brucella melitensis biovar
           Abortus 2308]
 gi|161335430|gb|ABX61735.1| Uracil-DNA glycosylase superfamily [Brucella canis ATCC 23365]
 gi|163673643|gb|ABY37754.1| Uracil-DNA glycosylase superfamily [Brucella suis ATCC 23445]
 gi|189019434|gb|ACD72156.1| Uracil-DNA glycosylase superfamily [Brucella abortus S19]
 gi|225640534|gb|ACO00448.1| Uracil-DNA glycosylase superfamily protein [Brucella melitensis
           ATCC 23457]
 gi|237789940|gb|EEP64150.1| cytoplasmic protein [Brucella abortus str. 2308 A]
 gi|255999246|gb|ACU47645.1| phage SPO1 DNA polymerase-related protein [Brucella microti CCM
           4915]
 gi|260097042|gb|EEW80917.1| uracil-DNA glycosylase superfamily protein [Brucella abortus NCTC
           8038]
 gi|260153714|gb|EEW88806.1| uracil-DNA glycosylase superfamily protein [Brucella melitensis bv.
           1 str. 16M]
 gi|260156288|gb|EEW91368.1| uracil-DNA glycosylase superfamily protein [Brucella suis bv. 4
           str. 40]
 gi|260667948|gb|EEX54888.1| uracil-DNA glycosylase superfamily protein [Brucella abortus bv. 4
           str. 292]
 gi|260671889|gb|EEX58710.1| uracil-DNA glycosylase superfamily protein [Brucella abortus bv. 2
           str. 86/8/59]
 gi|260674519|gb|EEX61340.1| uracil-DNA glycosylase superfamily protein [Brucella abortus bv. 6
           str. 870]
 gi|260872967|gb|EEX80036.1| uracil-DNA glycosylase superfamily protein [Brucella abortus bv. 9
           str. C68]
 gi|260915264|gb|EEX82125.1| uracil-DNA glycosylase superfamily protein [Brucella abortus bv. 3
           str. Tulya]
 gi|260920434|gb|EEX87087.1| uracil-DNA glycosylase superfamily protein [Brucella ceti B1/94]
 gi|260924071|gb|EEX90639.1| uracil-DNA glycosylase superfamily protein [Brucella ceti M13/05/1]
 gi|261294209|gb|EEX97705.1| uracil-DNA glycosylase superfamily protein [Brucella ceti
           M644/93/1]
 gi|261296531|gb|EEY00028.1| uracil-DNA glycosylase superfamily protein [Brucella pinnipedialis
           B2/94]
 gi|261304162|gb|EEY07659.1| uracil-DNA glycosylase superfamily protein [Brucella pinnipedialis
           M163/99/10]
 gi|261737847|gb|EEY25843.1| uracil-DNA glycosylase superfamily [Brucella sp. F5/99]
 gi|261741729|gb|EEY29655.1| uracil-DNA glycosylase superfamily protein [Brucella suis bv. 5
           str. 513]
 gi|262552282|gb|EEZ08272.1| uracil-DNA glycosylase superfamily protein [Brucella ceti
           M490/95/1]
 gi|262765709|gb|EEZ11498.1| uracil-DNA glycosylase superfamily protein [Brucella melitensis bv.
           3 str. Ether]
 gi|263001544|gb|EEZ14119.1| uracil-DNA glycosylase superfamily protein [Brucella melitensis bv.
           1 str. Rev.1]
 gi|263094593|gb|EEZ18391.1| uracil-DNA glycosylase superfamily [Brucella melitensis bv. 2 str.
           63/9]
 gi|264660544|gb|EEZ30805.1| uracil-DNA glycosylase superfamily protein [Brucella pinnipedialis
           M292/94/1]
 gi|294820602|gb|EFG37601.1| uracil-DNA glycosylase superfamily protein [Brucella sp. NVSL
           07-0026]
 gi|297175189|gb|EFH34536.1| uracil-DNA glycosylase superfamily protein [Brucella abortus bv. 5
           str. B3196]
 gi|326408670|gb|ADZ65735.1| Uracil-DNA glycosylase superfamily [Brucella melitensis M28]
 gi|326538395|gb|ADZ86610.1| uracil-DNA glycosylase superfamily protein [Brucella melitensis
           M5-90]
          Length = 223

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 43/147 (29%), Gaps = 22/147 (14%)

Query: 105 TEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEI-------------MRTQ 149
            E   L+I+G  P     N +G+PF+G   G +L   L                      
Sbjct: 42  DEDVRLLIVGLAPGLRGANRTGRPFTGDYAGELLYSTLCEFGFATGKFEARPDDSLRLLD 101

Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FFNNDA 206
             I       PP N+ + +      + +        +   ++ +G               
Sbjct: 102 ACIVNAVRCVPPENKPVGSEINNCRQFLTPMLTRFPNLDAVVTLGTIAHQSTVRALGVPV 161

Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVH 233
            +     GK +++      +   ++ H
Sbjct: 162 SRHPFGHGKATDI----GPLRIFSSYH 184


>gi|256546114|ref|ZP_05473467.1| uracil DNA glycosylase family protein [Anaerococcus vaginalis ATCC
           51170]
 gi|256398231|gb|EEU11855.1| uracil DNA glycosylase family protein [Anaerococcus vaginalis ATCC
           51170]
          Length = 190

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 59/168 (35%), Gaps = 23/168 (13%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML--QSIEIMRTQIHISMISPWHPPG 162
            +   ++IIG  P      SG  F+ K+G  L   L      +      I  +  ++P  
Sbjct: 31  NKDSKILIIGQAPGKKVEESGILFNDKSGENLVDWLGISMDTLHGKNFSILPMDFYYPGK 90

Query: 163 NRNLSNIEMEICRPIIMRQIE------LISPKILLFIGNKTKNFFFNNDAQKT-YQNLGK 215
            ++      +  R  I ++        + +  + + IG   + F+  +D +K   + +  
Sbjct: 91  GKSGD----KAPRKFIAKEYHPLLLEEIKNINLTILIGAYAQKFYLKDDFKKNLTETVRN 146

Query: 216 WSNLCTPHSIIPTLATVHPQEL-----IQYPLIKKNTWHALITLKKAL 258
           + +    +        VHP  L      +    K+ T   L  + + +
Sbjct: 147 FKDYLPEY-----FPLVHPSPLNNRWMAKNKFFKEETLPELKKIIQRI 189


>gi|254555229|ref|YP_003061646.1| hypothetical protein JDM1_0060 [Lactobacillus plantarum JDM1]
 gi|254044156|gb|ACT60949.1| conserved hypothetical protein [Lactobacillus plantarum JDM1]
          Length = 163

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 53/167 (31%), Gaps = 19/167 (11%)

Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP--WHPPGN 163
               +++I   P      +   F+  +G+ L   +        Q     + P  ++ PG 
Sbjct: 3   PTATILVISQAPGRIAQNTKTYFNDASGDRLRDWMGVTREQFYQSDRIAVMPLDFYYPGK 62

Query: 164 RNLSNIEMEICRPIIMRQ---IELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNL 219
               ++           +     + + ++ L +G      +     QKT    +  + + 
Sbjct: 63  GKSGDLPPRKGFMDKWHEPLLAMMPNVQLTLLVGQYAIKAYLGRSRQKTLTATVQNYQDY 122

Query: 220 CTPHSIIPTLATVHPQELIQYPLIKKNTWH------ALI-TLKKALK 259
              +        VHP   + Y   KKN W        L   +K ALK
Sbjct: 123 LPDY-----FPLVHPSP-LNYGWQKKNPWFQATVVPDLQRRVKAALK 163


>gi|256032916|pdb|3IKB|A Chain A, The Structure Of A Conserved Protein From Streptococcus
           Mutans Ua159.
 gi|256032917|pdb|3IKB|B Chain B, The Structure Of A Conserved Protein From Streptococcus
           Mutans Ua159
          Length = 198

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/211 (10%), Positives = 59/211 (27%), Gaps = 40/211 (18%)

Query: 71  AQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQ--------DLMIIGYTPSDSDN 122
           +    SL E+   + +         S + +   +             + I+G  P     
Sbjct: 1   SNAXTSLEEITKAIXA--------DSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQ 52

Query: 123 ISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQI 182
            S   ++ K+G+ L +                + P          + ++   +    +  
Sbjct: 53  ESRLYWNDKSGDRLREWXGVDYDTFYHSGYFAVIPXDFYYPGKGKSGDLPPRKGFAQK-- 110

Query: 183 ELISP--------KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII--PTLATV 232
               P        ++ + IGN  + ++ +  +        K ++    +          V
Sbjct: 111 -WHQPILDLLPDIQLTILIGNYAQKYYLHQKSSV------KLTDTVAHYKKYLPDYFPLV 163

Query: 233 HPQ-----ELIQYPLIKKNTWHALITLKKAL 258
           HP         ++P  +      L  + + +
Sbjct: 164 HPSPRNQIWXSRHPWFEAQVVPDLKKIIQQI 194


>gi|225627150|ref|ZP_03785188.1| cytoplasmic protein [Brucella ceti str. Cudo]
 gi|225617985|gb|EEH15029.1| cytoplasmic protein [Brucella ceti str. Cudo]
          Length = 223

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 43/147 (29%), Gaps = 22/147 (14%)

Query: 105 TEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEI-------------MRTQ 149
            E   L+I+G  P     N +G+PF+G   G +L   L                      
Sbjct: 42  DEDIRLLIVGLAPGLRGANRTGRPFTGDYAGELLYSTLCEFGFATGKFEARPDDSLRLLD 101

Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FFNNDA 206
             I       PP N+ + +      + +        +   ++ +G               
Sbjct: 102 ACIVNAVRCVPPENKPVGSEINNCRQFLTPMLTRFPNLDAVVTLGTIAHQSTVRALGVPV 161

Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVH 233
            +     GK +++      +   ++ H
Sbjct: 162 SRHPFGHGKATDI----GPLRIFSSYH 184


>gi|170017104|ref|YP_001728023.1| Uracil-DNA glycosylase [Leuconostoc citreum KM20]
 gi|169803961|gb|ACA82579.1| Uracil-DNA glycosylase [Leuconostoc citreum KM20]
          Length = 190

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 56/167 (33%), Gaps = 15/167 (8%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
               +++IIG  PS     +G  +   +G+ L   L   E +  Q     + P       
Sbjct: 28  PRTAEILIIGQAPSKRVQETGIMWHDASGDRLRDWLGVSETVFYQSGKIGVIPMDFYYPG 87

Query: 165 NLSNIEME-----ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
             ++ +         +       E+ + K+++ IG   + ++ N   ++T     K    
Sbjct: 88  KAASGDKAPRKGVAEKWHPKLLGEMPNVKLIILIGAYAQRYYLNLTNKETITATIKNYQH 147

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALI-TLKKALKN 260
             P         VHP       L + P  ++     L   ++  LK 
Sbjct: 148 YLP----KYFPIVHPSPRNNIWLKKNPWFEQEVLPMLKQEVQAILKQ 190


>gi|167615066|ref|ZP_02383701.1| Uracil DNA glycosylase superfamily superfamily protein
           [Burkholderia thailandensis Bt4]
          Length = 175

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 56/167 (33%), Gaps = 17/167 (10%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPP 161
                ++I+G  P    + SG P+   +G  L + L    +     +   I  +   +P 
Sbjct: 4   DPRARILIVGQAPGARVHASGIPWDDASGKRLREWLNVDDATFYDESLFAIVPMGFCYPG 63

Query: 162 GNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQKT-YQNLGKWSN 218
              +  N     C P+ + ++    P  ++ L IG   +  F     + +  + +  W  
Sbjct: 64  RGASGDNPPRPECAPLWLDKLLGELPDIRLTLLIGQYAQRRFLGARRKSSLTETVRAWPE 123

Query: 219 LCTPHSIIPTLATVHPQELIQYPLI-KKNTW---HALITLKKALKNL 261
                     +   HP    +     K++ W     L  L+  +  L
Sbjct: 124 Y-----GPEFIPLAHPSP--RNQGWLKQHPWFEAEVLPALRGKVAEL 163


>gi|115525035|ref|YP_781946.1| uracil-DNA glycosylase superfamily protein [Rhodopseudomonas
           palustris BisA53]
 gi|115518982|gb|ABJ06966.1| Uracil-DNA glycosylase superfamily [Rhodopseudomonas palustris
           BisA53]
          Length = 225

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 45/164 (27%), Gaps = 33/164 (20%)

Query: 88  HDCHLC-------STSLS--------TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131
            +C LC         +           + +       L+I+G  P     N +G+PF+G 
Sbjct: 22  RNCPLCPRLVAFRKEARQREPDWFNAPVPSFGGTDAALLIVGLAPGMQGANRTGRPFTGD 81

Query: 132 T-GNMLDKMLQSIEIMRTQ-------------IHISMISPWHPPGNRNLSNIEMEICRPI 177
             G++L   L      +                 IS      PP N+ L          +
Sbjct: 82  YAGDLLYPTLLEYGFAKGHYQARPDDGLKLIDCRISNAVRCVPPLNKPLPVEINTCRDFL 141

Query: 178 IMRQIELISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSN 218
            +    +   + ++ +G              A       G   +
Sbjct: 142 GLGIAAMPRLRAIIALGRVAHETTVKTLGLRAVAAPFAHGAVHD 185


>gi|329767655|ref|ZP_08259175.1| hypothetical protein HMPREF0428_00872 [Gemella haemolysans M341]
 gi|328839082|gb|EGF88668.1| hypothetical protein HMPREF0428_00872 [Gemella haemolysans M341]
          Length = 194

 Score = 49.7 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/140 (11%), Positives = 44/140 (31%), Gaps = 13/140 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
                ++I+G  P      S   F+ K+G  L + +   + +  +  +  + P       
Sbjct: 32  PSTAKILIVGQAPGIKAQESKIFFNDKSGVKLREWMGIDDEIFYKSGLIGVVPMDFYYPG 91

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    +        + + ++++ +G   + ++  ND ++        +  
Sbjct: 92  KGKSGDLPPRKNFAIKWHSKVLELMPNLELIILVGKYAQEYYLGNDKKQ------NLTET 145

Query: 220 CTPHSII--PTLATVHPQEL 237
              +          VHP  L
Sbjct: 146 VFNYKQYLPRYFPIVHPSPL 165


>gi|256060777|ref|ZP_05450939.1| Uracil-DNA glycosylase superfamily protein [Brucella neotomae 5K33]
 gi|261324767|ref|ZP_05963964.1| uracil-DNA glycosylase superfamily protein [Brucella neotomae 5K33]
 gi|261300747|gb|EEY04244.1| uracil-DNA glycosylase superfamily protein [Brucella neotomae 5K33]
          Length = 223

 Score = 49.7 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 43/147 (29%), Gaps = 22/147 (14%)

Query: 105 TEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEI-------------MRTQ 149
            E   L+I+G  P     N +G+PF+G   G +L   L                      
Sbjct: 42  DEDVRLLIVGLAPGLRGANRTGRPFTGDYAGELLYSTLCEFGFATGKFEARPDDSLRLLD 101

Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FFNNDA 206
             I       PP N+ + +      + +        +   ++ +G               
Sbjct: 102 ACIVNAVRCVPPENKPVGSEINNCRQFLTPMLTRFPNLDAVVTLGTIAHQSTVRALGVPV 161

Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVH 233
            +     GK +++      +   ++ H
Sbjct: 162 SRHPFGHGKATDI----GPLRIFSSYH 184


>gi|154509626|ref|ZP_02045268.1| hypothetical protein ACTODO_02159 [Actinomyces odontolyticus ATCC
           17982]
 gi|153799260|gb|EDN81680.1| hypothetical protein ACTODO_02159 [Actinomyces odontolyticus ATCC
           17982]
          Length = 199

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 59/176 (33%), Gaps = 24/176 (13%)

Query: 99  TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMI 155
            +         +MI+G  P      +G  ++ ++G+ L   +   +       ++ I  +
Sbjct: 33  PLFYAG-PECRIMIVGQAPGRVAEETGIVWNDRSGDRLRDWMGVDRDTFYESGKLAIVPM 91

Query: 156 SPWHPPGNRNLSNIEMEICRPIIMRQIELISPK--ILLFIGNKTKNFFFNNDAQKTYQNL 213
             + P   ++      +        ++  + PK  + + +G      + N  +       
Sbjct: 92  DFYFPGTGKSGDLPPRKDFADTWHPRLLELMPKLEMTILVGAYATRRYLNLSSSA----- 146

Query: 214 GKWSNLCTPHSIIPTLATV----HPQELIQYPLI-KKNTW--HALI-TLKKALKNL 261
              + +   +     L T     HP    +  +  KKN W    ++  LK  + +L
Sbjct: 147 -SLTEVVRDYKRY--LPTYFPLVHPSP--RNQMWMKKNPWFAADVLPDLKARVASL 197


>gi|326407306|gb|ADZ64377.1| uracil DNA glycosylase superfamily protein [Lactococcus lactis
           subsp. lactis CV56]
          Length = 193

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 49/167 (29%), Gaps = 17/167 (10%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + IIG  P      S   ++  +G+ L   L        + +   I P       
Sbjct: 32  HKEAKICIIGQAPGIRAQESRLFWNDPSGDRLRDWLGIDRTTFYESNKISILPLDFYFPG 91

Query: 165 NLSNIEMEICRPI---IMRQIELISPKI--LLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
              + ++           + +    P+I   + +G+    ++ N  +      +      
Sbjct: 92  KGKSGDLPPRAGFAQKWHKALLEEMPEIELFILVGSYAIKYYLNLKSSAKTTEVIHDFEA 151

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKNL 261
             P         VHP       L + P  +      L  LKK +  L
Sbjct: 152 YLP----KYFPLVHPSPRNNMWLAKNPWFEPEL---LPELKKRVAQL 191


>gi|319775908|ref|YP_004138396.1| uracil-DNA glycosylase [Haemophilus influenzae F3047]
 gi|329123764|ref|ZP_08252323.1| uracil DNA glycosylase [Haemophilus aegyptius ATCC 11116]
 gi|317450499|emb|CBY86716.1| Predicted uracil-DNA glycosylase [Haemophilus influenzae F3047]
 gi|327469667|gb|EGF15135.1| uracil DNA glycosylase [Haemophilus aegyptius ATCC 11116]
          Length = 195

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/164 (12%), Positives = 47/164 (28%), Gaps = 15/164 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + I+G  P      S   ++ K+G  L + L           +  + P       
Sbjct: 33  PKTARINIVGQAPGLKAEQSRLYWNDKSGERLREWLGVDYDYFYNSGMFSVLPMDFYYPG 92

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    R   M    L + ++ + IG   + ++   +       +  +   
Sbjct: 93  KGKSGDLPPRQGFAERWHSMILGHLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQF 152

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258
                    +  VHP       + + P  ++     L  L K +
Sbjct: 153 LPHF-----MPLVHPSPRNQLWVTKNPWFEEQVIPELQILVKQI 191


>gi|85715064|ref|ZP_01046048.1| uracil-DNA glycosylase superfamily [Nitrobacter sp. Nb-311A]
 gi|85697979|gb|EAQ35852.1| uracil-DNA glycosylase superfamily [Nitrobacter sp. Nb-311A]
          Length = 190

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 41/153 (26%), Gaps = 22/153 (14%)

Query: 99  TICATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEI----------- 145
            + +       ++I+G  P     N +G+PF+G   G++L   L                
Sbjct: 12  PVPSFGDSDAAVLIVGLAPGLQGANRTGRPFTGDYAGDLLYATLLKYGFAAGRYQARPDD 71

Query: 146 --MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF--- 200
                   IS      PP N+ L          +      +   + ++ +G    +    
Sbjct: 72  GLKLVDCRISNAVRCVPPQNKPLPAEINTCRAFLSATLEAMPRLRAIVALGRIAHDSAVK 131

Query: 201 FFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
                A       G           +    + H
Sbjct: 132 ALGVRAAAAPFAHGAVHTA----GGVKLYDSYH 160


>gi|323339439|ref|ZP_08079721.1| uracil DNA glycosylase [Lactobacillus ruminis ATCC 25644]
 gi|323093150|gb|EFZ35740.1| uracil DNA glycosylase [Lactobacillus ruminis ATCC 25644]
          Length = 193

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/161 (10%), Positives = 47/161 (29%), Gaps = 18/161 (11%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   ++IIG  P      +G  ++ ++G+ L   L     +  +     + P       
Sbjct: 32  PKNARILIIGQAPGKKAQDTGIVWNDRSGDRLRDWLGIDRNVFYESGKIAVLPMDFYFPG 91

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    +        +   ++ L +G+     + +  + +      K +++
Sbjct: 92  TGKSGDLPPRKGFAAKWHPRLLSAMPDIQLTLLVGSYAVKHYLHLKSSQ------KLTDV 145

Query: 220 CTPHSII--PTLATVHPQ-----ELIQYPLIKKNTWHALIT 253
              +          VHP       + + P  +      L  
Sbjct: 146 VKDYKSFLPKYFPLVHPSPRNQIWMKKNPWFEAEVLPDLRE 186


>gi|42523757|ref|NP_969137.1| hypothetical protein Bd2306 [Bdellovibrio bacteriovorus HD100]
 gi|39575964|emb|CAE80130.1| hypothetical protein predicted by Glimmer/Critica [Bdellovibrio
           bacteriovorus HD100]
          Length = 165

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 17/45 (37%), Gaps = 12/45 (26%)

Query: 214 GKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKAL 258
           GKW              T  P  L++ P  KK  W+ L  + K L
Sbjct: 131 GKWLE------------TYSPAYLLEDPAAKKVVWNDLQKVMKEL 163


>gi|317051912|ref|YP_004113028.1| hypothetical protein Selin_1743 [Desulfurispirillum indicum S5]
 gi|316946996|gb|ADU66472.1| hypothetical protein Selin_1743 [Desulfurispirillum indicum S5]
          Length = 196

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 55/183 (30%), Gaps = 19/183 (10%)

Query: 76  SLHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
           +L  L   +R    C   L   +   +         ++I G  P    + SG PF   +G
Sbjct: 5   NLDALLVDIRRCTLCEPYLPLGARPVV--QVHRDASILIAGQAPGRRVHASGIPFDDASG 62

Query: 134 NMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--K 188
           + L + +   + +     +I I  +   +P    +        C       +  + P  +
Sbjct: 63  DRLRQWMGVAREVFYDERRIAIVPMGFCYPGTGPHGDLPPRPQCAATWRAALLSLLPHIQ 122

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLI 243
           + L IG   + +            +  W            +A  HP       L Q P  
Sbjct: 123 LTLVIGKYAQEYHMLPRPDSVTAAVANWQERWPH-----LIALPHPSPRNHRWLRQNPWF 177

Query: 244 KKN 246
           +  
Sbjct: 178 EAQ 180


>gi|152995458|ref|YP_001340293.1| uracil-DNA glycosylase superfamily protein [Marinomonas sp. MWYL1]
 gi|150836382|gb|ABR70358.1| uracil-DNA glycosylase superfamily [Marinomonas sp. MWYL1]
          Length = 208

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 59/203 (29%), Gaps = 30/203 (14%)

Query: 80  LKSLLRSFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDK 138
           LK  + S   C  +       I         L+I G  P    +  G+PF   +G+ L +
Sbjct: 9   LKDAVLSCQHCADVLPYPPKPIL-QIHPNAKLLIAGQAPGQKTHDIGRPFDDLSGDRLRE 67

Query: 139 ML---QSIEIMRTQIHISMISPWHPPGNRNLS-----------NIEMEICRPIIMRQIEL 184
            L           Q+ I  +    P  + + S               E         +  
Sbjct: 68  WLGLSADEFYDEQQVAIVPMGFCFPGNSIHKSGPSTGKKSGDLPPRPECSIKWREAVLNQ 127

Query: 185 -ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELI 238
             + ++ + +G   + +        T Q   +W            L   HP       L 
Sbjct: 128 LTNIELTIVLGAYAQAYHLGQSGNVTEQVK-QWRYWLEQGK----LVLPHPSPRNNRWLK 182

Query: 239 QYPLIKKNTWHALITLKKALKNL 261
           Q P  + +    L  L+  +K L
Sbjct: 183 QNPWFESDV---LPELRLRIKGL 202


>gi|297539473|ref|YP_003675242.1| hypothetical protein M301_2300 [Methylotenera sp. 301]
 gi|297258820|gb|ADI30665.1| conserved hypothetical protein [Methylotenera sp. 301]
          Length = 210

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 5/80 (6%)

Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241
           I+ +  K+L+ +G           A+      GK   L      +  +AT     L+Q P
Sbjct: 131 IKDMQAKLLIAMGEAVVQMILQ-SAEPITHLSGKLHQL----HGVTLIATYDLPHLLQNP 185

Query: 242 LIKKNTWHALITLKKALKNL 261
             K   W  L    + L++L
Sbjct: 186 ADKAKVWRDLCMGLQILQDL 205


>gi|241889400|ref|ZP_04776701.1| uracil-DNA glycosylase [Gemella haemolysans ATCC 10379]
 gi|241863943|gb|EER68324.1| uracil-DNA glycosylase [Gemella haemolysans ATCC 10379]
          Length = 194

 Score = 49.4 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/169 (11%), Positives = 52/169 (30%), Gaps = 26/169 (15%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   ++IIG  P      S   F+ K+G  L + +   + +  +  +  + P       
Sbjct: 32  PKTAKILIIGQAPGIKAQESKIFFNDKSGVKLREWMGIDDEIFYKSGLIGVVPMDFYYPG 91

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    +  +     + + ++++ +G   ++++  N+ ++        +  
Sbjct: 92  KGKSGDLPPRKNFAPKWHVKVLELMPNLELIVLVGKYAQDYYLGNEKKQNLTE----TVY 147

Query: 220 CTPHSIIPTLATVHPQELIQY---------------PLIKKNTWHALIT 253
                +      VHP  L                  P +KK     L  
Sbjct: 148 NYKQYLPRYFPIVHPSPL--NFHWHNKNPWFIQEVVPELKKRVKEILQK 194


>gi|300768899|ref|ZP_07078791.1| uracil-DNA glycosylase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|300493494|gb|EFK28670.1| uracil-DNA glycosylase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
          Length = 210

 Score = 49.4 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/149 (14%), Positives = 47/149 (31%), Gaps = 12/149 (8%)

Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP--WHPPGN 163
               +++I   P      +   F+  +G+ L   +        Q     + P  ++ PG 
Sbjct: 50  PTATILVISQAPGRIAQNTKTYFNDASGDRLRDWMGVTREQFYQSDRIAVMPLDFYYPGK 109

Query: 164 RNLSNIEMEICRPIIMRQ---IELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNL 219
               ++           +     + + ++ L +G      +     QKT    +  + + 
Sbjct: 110 GKSGDLPPRKGFMDKWHEPLLAMMPNVQLTLLVGQYAIKAYLGRSRQKTLTATVQNYQDY 169

Query: 220 CTPHSIIPTLATVHPQELIQYPLIKKNTW 248
              +        VHP   + Y   KKN W
Sbjct: 170 LPDY-----FPLVHPSP-LNYGWQKKNPW 192


>gi|28377013|ref|NP_783905.1| hypothetical protein lp_0048 [Lactobacillus plantarum WCFS1]
 gi|308179232|ref|YP_003923360.1| hypothetical protein LPST_C0041 [Lactobacillus plantarum subsp.
           plantarum ST-III]
 gi|28269844|emb|CAD62741.1| unknown [Lactobacillus plantarum WCFS1]
 gi|308044723|gb|ADN97266.1| hypothetical protein LPST_C0041 [Lactobacillus plantarum subsp.
           plantarum ST-III]
          Length = 210

 Score = 49.4 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/149 (14%), Positives = 47/149 (31%), Gaps = 12/149 (8%)

Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP--WHPPGN 163
               +++I   P      +   F+  +G+ L   +        Q     + P  ++ PG 
Sbjct: 50  PTATILVISQAPGRIAQNTKTYFNDASGDRLRDWMGVTREQFYQSDRIAVMPLDFYYPGK 109

Query: 164 RNLSNIEMEICRPIIMRQ---IELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNL 219
               ++           +     + + ++ L +G      +     QKT    +  + + 
Sbjct: 110 GKSGDLPPRKGFMDKWHEPLLAMMPNVQLTLLVGQYAIKAYLGRSRQKTLTATVQNYQDY 169

Query: 220 CTPHSIIPTLATVHPQELIQYPLIKKNTW 248
              +        VHP   + Y   KKN W
Sbjct: 170 LPDY-----FPLVHPSP-LNYGWQKKNPW 192


>gi|77412311|ref|ZP_00788625.1| Unknown [Streptococcus agalactiae CJB111]
 gi|77161630|gb|EAO72627.1| Unknown [Streptococcus agalactiae CJB111]
          Length = 194

 Score = 49.4 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/161 (13%), Positives = 58/161 (36%), Gaps = 16/161 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPP 161
            +   + I+G  P      +   +  K+G  L + L   +       +  +  +  ++P 
Sbjct: 32  PKTARINIVGQAPGLKTQEARLYWKDKSGVRLRQWLGVDEETFYHSGKFAVLPLDFYYPG 91

Query: 162 GNR--NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSN 218
             +  +L   +    +   +   E+ + ++ L +G   + ++  + A K   + +  + +
Sbjct: 92  KGKSGDLPPRKGFAEKWHPLILKEMPNVQLTLLVGQYAQKYYLGSSAHKNLTETVKAYKD 151

Query: 219 LCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITL 254
               +     L  VHP       L + P  +K+    L  +
Sbjct: 152 YLPDY-----LPLVHPSPRNQIWLKKNPWFEKDLIVDLQKI 187


>gi|90418085|ref|ZP_01225997.1| putative uracil-DNA glycosylase [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90337757|gb|EAS51408.1| putative uracil-DNA glycosylase [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 209

 Score = 49.4 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 65/201 (32%), Gaps = 23/201 (11%)

Query: 80  LKSLLRSFHDC-------HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT 132
           L   +R+   C        L  T  + + A  +    L+I G  P +  + S  PF+  +
Sbjct: 12  LYDTIRACRICRDAPVGPPLPVT-PNPVLAL-SGTARLLIAGQAPGNLADRSTTPFNDPS 69

Query: 133 GNMLDKMLQ---SIEIMRTQIHISMISPWHP---PGNRNLSNIEMEICRPIIMRQIELIS 186
           G  L   L     +     ++ I  +    P   P   +                  +  
Sbjct: 70  GVRLRDWLGLSPEVFYDSARVAILPMGFCFPGTDPMGGDRPPRIECRAAWHDRAMAAMPQ 129

Query: 187 PKILLFIGNKTKNFFFNN-DAQKTYQNLGKWSNLCTPHSII-PTLATVHPQELIQYPLI- 243
            +++L IG   + F   +   +   + +  W  +        P L   HP    +     
Sbjct: 130 IELILAIGQHAQRFHIASGAGRSLTETVTNWRTILAEGGRFAPVLPLPHPSW--RNSGWL 187

Query: 244 KKNTW--HALI-TLKKALKNL 261
           K++ W    L+  L++ +  L
Sbjct: 188 KRHPWFGEELLPELRRRVGEL 208


>gi|225352217|ref|ZP_03743240.1| hypothetical protein BIFPSEUDO_03833 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157464|gb|EEG70803.1| hypothetical protein BIFPSEUDO_03833 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 209

 Score = 49.4 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/164 (11%), Positives = 47/164 (28%), Gaps = 16/164 (9%)

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL 166
           G  +++IG  P      +  P++ K+G  L   L              + P       + 
Sbjct: 47  GARIVVIGQAPGAVAEETRIPWNDKSGERLRDWLGVSRETFYDPERVALLPMDFYFPGHG 106

Query: 167 -----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221
                   +    +        + + ++ + +G      + +     +   + +  +   
Sbjct: 107 RSGDLPPRKGFAEQWHPALLALMPNVRLTVLVGAYAVRRYLHLKNSDSLTTVVRDYDAYI 166

Query: 222 PHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKN 260
                P +   HP       + + P  +  T   L  LK  +  
Sbjct: 167 GRGFFPLV---HPSPRNQLWMSRNPWFEAET---LPALKARVNA 204


>gi|13470766|ref|NP_102335.1| hypothetical protein mll0558 [Mesorhizobium loti MAFF303099]
 gi|14021509|dbj|BAB48121.1| mll0558 [Mesorhizobium loti MAFF303099]
          Length = 224

 Score = 49.0 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 67/212 (31%), Gaps = 22/212 (10%)

Query: 66  QADSIAQKACSLHELKSLLRSFHDC-------HLCSTSLSTICATQTEGQDLMIIGYTPS 118
           Q     + +  L  L + +R+   C        L       +    +    ++I    P 
Sbjct: 13  QPAECGRLSVELDSLAATVRACRICVENPVGKPL-PHEPRPVL-RPSSSARILIASQAPG 70

Query: 119 DSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSN-IEMEIC 174
              ++SG PF+  +G+ L   L           +  I  +    P  +    +      C
Sbjct: 71  TKVHLSGMPFTDASGDRLRSWLGVTSDEFYDIEKFAIVPMGFCFPGQDAKGGDLPPRREC 130

Query: 175 RPIIMRQIELISPKI--LLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231
            P     +  + P+I  +L IG   +++           + +  W  +         L  
Sbjct: 131 APAWRAPLMALMPRIDLVLTIGIYAQSWHMAAARRPSLTETVMDWRAIWENSVGAKVLPL 190

Query: 232 VHPQELIQYPLI-KKNTWH--ALI-TLKKALK 259
            HP    +     K+N W    L+  L+  ++
Sbjct: 191 PHPSW--RNSGWLKQNPWFEMDLLPFLRSEIR 220


>gi|116512695|ref|YP_811602.1| hypothetical protein LACR_2008 [Lactococcus lactis subsp. cremoris
           SK11]
 gi|116108349|gb|ABJ73489.1| Uracil-DNA glycosylase [Lactococcus lactis subsp. cremoris SK11]
          Length = 193

 Score = 49.0 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 49/167 (29%), Gaps = 17/167 (10%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + IIG  P      S   ++  +G  L   L        Q +   I P       
Sbjct: 32  HKEAKICIIGQAPGIRAQESRLFWNDPSGERLRDWLGIDRETFYQSNKISILPLDFYFPG 91

Query: 165 NLSNIEMEICRPI---IMRQIELISP--KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
              + ++   +        Q+    P  +  + +G+    ++ N  +      + +    
Sbjct: 92  KGKSGDLPPRKGFAEKWHEQLLQQMPEIEFFVLVGSYAIKYYLNLKSSAKTTEVIRDFEK 151

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKNL 261
             P         +HP       L + P  +      +  L+K +  L
Sbjct: 152 YLP----KYFPLIHPSPRNNIWLAKNPWFEPQL---VPELQKRIAQL 191


>gi|332638021|ref|ZP_08416884.1| Uracil-DNA glycosylase [Weissella cibaria KACC 11862]
          Length = 190

 Score = 49.0 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 44/145 (30%), Gaps = 14/145 (9%)

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL 166
              ++IIG  P      +G  F+ K+G+ L + +     +     +  + P         
Sbjct: 30  DVRILIIGQAPGLKVEQTGVSFNDKSGDRLREWMGIDRDVFYDSGLIGVLPMDFYYPGKA 89

Query: 167 -----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221
                   +             +    ++L +G  ++ ++ +  + +T  ++ K      
Sbjct: 90  KTGDLPPRKFVAQEWHQRIMATMPKIDLILLLGGYSQKYYLDVKSSETLTSIVK----RF 145

Query: 222 PHSIIPTLATVHPQ-----ELIQYP 241
                      HP       L + P
Sbjct: 146 ADFGPKYFPLAHPSPLNNIWLAKNP 170


>gi|270293176|ref|ZP_06199387.1| uracil DNA glycosylase family protein [Streptococcus sp. M143]
 gi|270279155|gb|EFA25001.1| uracil DNA glycosylase family protein [Streptococcus sp. M143]
          Length = 194

 Score = 49.0 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/164 (12%), Positives = 46/164 (28%), Gaps = 14/164 (8%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + I+G  P      +G  +  K+G+ L + L   E       +  + P       
Sbjct: 32  PKTARINIVGQAPGLKTQEAGIYWKDKSGDRLREWLGVDEDTFYNSGLFAVIPMDFYFPG 91

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
           +         +    +          + ++ L IG   + ++ +           K    
Sbjct: 92  HGKSGDLPPRKGFAEKWHPQLLKGCPNIELTLLIGQYAQTYYLHEKVSGKVTERVKHYKN 151

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258
             P         VHP       + + P  +      L  L + +
Sbjct: 152 YLPE----FFPLVHPSPRNQIWMAKNPWFEAEVVPDLKALVQKI 191


>gi|304321224|ref|YP_003854867.1| putative uracil-DNA glycosylase [Parvularcula bermudensis HTCC2503]
 gi|303300126|gb|ADM09725.1| possible uracil-DNA glycosylase [Parvularcula bermudensis HTCC2503]
          Length = 206

 Score = 49.0 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 48/177 (27%), Gaps = 23/177 (12%)

Query: 104 QTEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEIMRTQI----------- 150
                 L+I+G  P     N +G+PF+G   G++L + L S                   
Sbjct: 28  GASSVSLLIVGLAPGVQGANRTGRPFTGDYAGDLLYQTLGSFGWATGPYDKRPDDGLELT 87

Query: 151 --HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF---FNND 205
              I+      PP N+  +         +  R   L    ++L +G    +         
Sbjct: 88  GAMITNAVRCVPPQNKPTAAEINRCRPFLRSRISSLPRLDVILSLGKIAHDSVVRTLGLK 147

Query: 206 AQKTYQNLGKWSNLCTPHSIIP--TLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
            +             T     P    A+ H           + T      + + +  
Sbjct: 148 LKDHPFGH-NVHYAVTAEGGRPLALAASYHCS--RYNTNTGRLTEEMFADVFRQIAK 201


>gi|307292699|ref|ZP_07572545.1| Uracil-DNA glycosylase superfamily [Sphingobium chlorophenolicum
           L-1]
 gi|306880765|gb|EFN11981.1| Uracil-DNA glycosylase superfamily [Sphingobium chlorophenolicum
           L-1]
          Length = 217

 Score = 49.0 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 49/189 (25%), Gaps = 32/189 (16%)

Query: 76  SLHELKSLLRSFHDCHLCST---------------SLSTICATQTEGQDLMIIGYTPSDS 120
           +L          HDC LC                   + +         + IIG  P   
Sbjct: 2   TLQSPIPQSEPPHDCPLCPRLVAFRGENRAEHPDWWNAPVPVFGDPLARIAIIGLAPGKM 61

Query: 121 D-NISGKPFSGKT-GNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRN 165
             N +G+PF+G   G++L   L                 +      I       PP N  
Sbjct: 62  GANRTGRPFTGDYAGDLLFATLGKFGLTEGKYDARADDGLKLRNAIILNAVKCLPPQN-K 120

Query: 166 LSNIEMEICRPIIM-RQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHS 224
               E+  CR  +      L   ++ + +G             K  +            S
Sbjct: 121 PLPEEVHNCRAFLKPAVAALPHAQVFVALGQIAHQSAVKALGGKLPKARFAHLAEHRMPS 180

Query: 225 IIPTLATVH 233
               + + H
Sbjct: 181 GKMLIDSYH 189


>gi|55821138|ref|YP_139580.1| hypothetical protein stu1126 [Streptococcus thermophilus LMG 18311]
 gi|55737123|gb|AAV60765.1| conserved hypothetical protein [Streptococcus thermophilus LMG
           18311]
          Length = 188

 Score = 49.0 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/165 (10%), Positives = 49/165 (29%), Gaps = 16/165 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + I+G  P      SG  ++  +G+ L   +        +  +  I P       
Sbjct: 26  PKTARINIVGQAPGIRAQESGLYWNDPSGDNLRDWMGVSREEFYESGLFAIVPMDFYFPG 85

Query: 165 NLS-----NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSN 218
           +         +    +          + ++ + +GN  ++++ +  +       +  + +
Sbjct: 86  HGKSGDLGPRKGFADKWHERVLDLAPNIQLTILVGNYAQHYYLHQKSSTKLTDTVKHYRD 145

Query: 219 LCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258
               +        VHP         + P   K     L  L + +
Sbjct: 146 YLPDY-----FPLVHPSPRNNIWQAKNPWFMKEVLPDLKELVQKI 185


>gi|254501006|ref|ZP_05113157.1| Uracil DNA glycosylase superfamily [Labrenzia alexandrii DFL-11]
 gi|222437077|gb|EEE43756.1| Uracil DNA glycosylase superfamily [Labrenzia alexandrii DFL-11]
          Length = 197

 Score = 49.0 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 37/120 (30%), Gaps = 15/120 (12%)

Query: 99  TICATQTEGQDLMIIGYTPSDSDNI-SGKPFSGKT-GNMLDKMLQSIEIMRTQI------ 150
            + +  +    L++IG  P       +G+PF+G   G++L K +                
Sbjct: 19  PVPSFTSPNPRLLVIGLAPGMRGANATGRPFTGDYAGDLLYKTMLDFGFAEGAYKARPDD 78

Query: 151 -------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
                   I+      PP N+            ++       S + +L +G      F  
Sbjct: 79  GLVLADALITNAVRCLPPQNKPTGPEIKTCRPYLLSTLAANPSVRAVLALGRIAHETFLT 138


>gi|306833319|ref|ZP_07466447.1| uracil-DNA glycosylase [Streptococcus bovis ATCC 700338]
 gi|304424516|gb|EFM27654.1| uracil-DNA glycosylase [Streptococcus bovis ATCC 700338]
          Length = 194

 Score = 49.0 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/167 (13%), Positives = 46/167 (27%), Gaps = 15/167 (8%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + I+G  P      SG  ++  +G+ L K L     +     +  + P       
Sbjct: 32  PKTARINIVGQAPGIRAQESGLYWNDPSGDNLRKWLGVDREIFYDSGLFAVVPMDYYFPG 91

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    +          + ++ + +G   + ++    +  T     K    
Sbjct: 92  TGKSGDLPPRKGFAEKWHKRTLAFAPNIELHILVGFYAQRYYLQQKSSVTLTETVKHYQT 151

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKALKN 260
             P         VHP         + P   K     L   +K+ L  
Sbjct: 152 YLP----QFFPLVHPSPRNNLWQARNPWFAKEVIPDLQKRVKEILAK 194


>gi|260580897|ref|ZP_05848721.1| uracil-DNA glycosylase [Haemophilus influenzae RdAW]
 gi|260092386|gb|EEW76325.1| uracil-DNA glycosylase [Haemophilus influenzae RdAW]
          Length = 214

 Score = 49.0 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/164 (13%), Positives = 48/164 (29%), Gaps = 15/164 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + I+G  P      S   ++ K+G+ L + L           I  + P       
Sbjct: 52  PKTARINIVGQAPGLKAEQSRLYWNDKSGDRLREWLGVDYDYFYNSGIFAVLPMDFYYPG 111

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    R   M    L + ++ + IG   + ++   +       +  +   
Sbjct: 112 KGKSGDLPPRQGFAERWHPMILGNLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQF 171

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258
                    +  VHP       + + P  ++     L  L K +
Sbjct: 172 LPHF-----MPLVHPSPRNQLWVTKNPWFEEQVIPELQILVKQI 210


>gi|259047093|ref|ZP_05737494.1| uracil DNA glycosylase family protein [Granulicatella adiacens ATCC
           49175]
 gi|259036143|gb|EEW37398.1| uracil DNA glycosylase family protein [Granulicatella adiacens ATCC
           49175]
          Length = 213

 Score = 49.0 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/178 (11%), Positives = 54/178 (30%), Gaps = 18/178 (10%)

Query: 94  STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHIS 153
              +  + +       ++I+G  P      S   ++ K+G+ L   +        Q  + 
Sbjct: 39  KAGIQPLFSA-PRRAKILIVGQAPGIKAQESRLFWNDKSGDNLRTWMGVTRDFFYQSDLF 97

Query: 154 MISPWHPPGNRNL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQK 208
            + P                 +    +        +   ++++ +G   ++++  +  +K
Sbjct: 98  AVVPMDYYYPGKGKSGDLPPRKGFAEKWHEKTLALMPDIELIILVGKYAQDYYLKDTKKK 157

Query: 209 TYQNLGKWSNLCTPHSIIPTLATVHPQELIQ-----YPLIKKNTWHALITLKKALKNL 261
                 K      P         VHP  L +      P  +K     L   +K ++ +
Sbjct: 158 NLTETVKAYKEYLP----KMFPLVHPSPLNRRWMAKNPWFEKEV---LPEFQKRVQEI 208


>gi|292655197|ref|YP_003535094.1| uracil DNA glycosylase [Haloferax volcanii DS2]
 gi|291372791|gb|ADE05018.1| uracil DNA glycosylase [Haloferax volcanii DS2]
          Length = 208

 Score = 49.0 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 42/155 (27%), Gaps = 10/155 (6%)

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDS-DNISGKPFSGKTGNMLDKMLQSI---EIM 146
            +  +    +        D  +IG  P       +G PF+G  G  L   L+        
Sbjct: 13  DMRPSCDRYVPGYGDANADFHVIGDHPGVHGGIETGVPFAGGAGEKLFPALEDGELLGEA 72

Query: 147 RTQIHISMISPWHPPGNRN---LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
             +  ++     +          S  +          ++  I+  +LL +G     +  N
Sbjct: 73  GDEPTVNSTFFSYLHMCVPDGTPSAADYTDMERFFDAELRAIAAHVLLPVGAVATKYVLN 132

Query: 204 NDAQKTYQN---LGKWSNLCTPHSIIPTLATVHPQ 235
           N     ++    +          S    L    P 
Sbjct: 133 NYTSVGWKTDIDMEALHGEELRGSGFLVLPIKDPA 167


>gi|254469821|ref|ZP_05083226.1| uracil-DNA glycosylase superfamily protein [Pseudovibrio sp. JE062]
 gi|211961656|gb|EEA96851.1| uracil-DNA glycosylase superfamily protein [Pseudovibrio sp. JE062]
          Length = 191

 Score = 49.0 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/192 (11%), Positives = 53/192 (27%), Gaps = 24/192 (12%)

Query: 91  HLCSTSLS-TICATQTEGQDLMIIGYTPS-DSDNISGKPFSGKT-GNMLDKMLQSIEIMR 147
            L     +  +         L+++G  P     N +G PF G   G ML+  L +     
Sbjct: 3   ELHPDWHNAPVLDYGPVDASLIVVGLAPGHKGGNRTGIPFFGDFSGEMLNGALTASGFAS 62

Query: 148 TQI-------------HISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIG 194
            +               I+ +    PP N              +   +     + ++ +G
Sbjct: 63  YKDVAAPELGIEPLDVRITNVVKCMPPKNAPKPAEIRTCRPFFLDSMLVSDQTRTVVAVG 122

Query: 195 NKTKNFFFN-NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWH---- 249
                      + +      G           +   ++ H  +       ++ T      
Sbjct: 123 RTAHEELLKAFELKLKDNPFGHNRETQLTP-SLRMFSSFHCSQ--YNVNTRRITAEQFTA 179

Query: 250 ALITLKKALKNL 261
             + +++ L +L
Sbjct: 180 VFMRVREYLSSL 191


>gi|258541189|ref|YP_003186622.1| uracil-DNA glycosylase [Acetobacter pasteurianus IFO 3283-01]
 gi|256632267|dbj|BAH98242.1| uracil-DNA glycosylase [Acetobacter pasteurianus IFO 3283-01]
 gi|256635324|dbj|BAI01293.1| uracil-DNA glycosylase [Acetobacter pasteurianus IFO 3283-03]
 gi|256638379|dbj|BAI04341.1| uracil-DNA glycosylase [Acetobacter pasteurianus IFO 3283-07]
 gi|256641433|dbj|BAI07388.1| uracil-DNA glycosylase [Acetobacter pasteurianus IFO 3283-22]
 gi|256644488|dbj|BAI10436.1| uracil-DNA glycosylase [Acetobacter pasteurianus IFO 3283-26]
 gi|256647543|dbj|BAI13484.1| uracil-DNA glycosylase [Acetobacter pasteurianus IFO 3283-32]
 gi|256650596|dbj|BAI16530.1| uracil-DNA glycosylase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256653587|dbj|BAI19514.1| uracil-DNA glycosylase [Acetobacter pasteurianus IFO 3283-12]
 gi|742236|prf||2009317C adhB downstream ORF
          Length = 213

 Score = 49.0 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 55/194 (28%), Gaps = 23/194 (11%)

Query: 64  VQQADSIAQKACSLHELKSLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTPSDSDN 122
              +   +     L+ L   +R    C          +    +    L+I G  P    +
Sbjct: 12  TPSSAKSSDVETQLNCLVQEIRKCTACAHKLPLGPRPVLHV-SPHARLLIAGQAPGTRVH 70

Query: 123 ISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH----PPGNRNLSNIEMEICR 175
            +G  F+  +G+ L   L   + +     ++ I  ++  +    P G       E     
Sbjct: 71  ETGVSFNDASGDRLRGWLGMSRDVFYDSNRVAILPMALCYPGVLPKGGDRPPPPECASLW 130

Query: 176 PIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII--PTLATVH 233
                   L + ++ L +G+  +N+             GK                   H
Sbjct: 131 R-ERILALLPNLRLTLLVGSYAQNYVLGK---------GKVYERTEHFQDFLPQYFPLPH 180

Query: 234 PQELIQYPLIKKNT 247
           P    +    ++ T
Sbjct: 181 PSW--RTGAWERKT 192


>gi|125624782|ref|YP_001033265.1| hypothetical protein llmg_2007 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|124493590|emb|CAL98575.1| Hypothetical protein llmg_2007 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300071582|gb|ADJ60982.1| hypothetical protein LLNZ_10345 [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 193

 Score = 48.6 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 50/167 (29%), Gaps = 17/167 (10%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + IIG  P      S   ++  +G  L   L        Q +   I P       
Sbjct: 32  HKEAKICIIGQAPGIRAQESRLFWNDPSGERLRDWLGIDRETFYQSNKISILPLDFYFPG 91

Query: 165 NLSNIEMEICRPI---IMRQIELISPKI--LLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
              + ++   +        Q+    P+I   + +G+    ++ N  +      + +    
Sbjct: 92  KGKSGDLPPRKGFAEKWHEQLLQQMPEIELFVLVGSYAIKYYLNLKSSAKTTEVIRDFEK 151

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKNL 261
             P         +HP       L + P  +      +  L+K +  L
Sbjct: 152 YLP----KYFPLIHPSPRNNIWLAKNPWFEPQL---VPELQKRIAQL 191


>gi|254429907|ref|ZP_05043614.1| Uracil DNA glycosylase superfamily [Alcanivorax sp. DG881]
 gi|196196076|gb|EDX91035.1| Uracil DNA glycosylase superfamily [Alcanivorax sp. DG881]
          Length = 198

 Score = 48.6 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 50/167 (29%), Gaps = 16/167 (9%)

Query: 79  ELKSLLRSFHDCHLCST----SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           +L  LL     C LC          +     EG  L+I+G  P    + +G P++  +G 
Sbjct: 3   QLIDLLEEVRACRLCEPHLPLGPRPVVQAG-EGARLLIVGQAPGTRVHETGIPWNDPSGE 61

Query: 135 MLDKMLQSIEIMRTQIHISMISPW------HPPGNRNLSNIEMEICRPIIMRQIELISPK 188
            L   LQ             I P          G       E    +       EL + +
Sbjct: 62  RLRDWLQIGPETFYDADQVAIVPMGLCYPGRGKGGDLPPRPEC-APQWHGPLLAELPNRR 120

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
           + L +G   + ++     +    N+  ++               HP 
Sbjct: 121 LTLLVGQYAQRYYLPQPGKTLTDNVRHFARALEAG----FFPLPHPS 163


>gi|306842087|ref|ZP_07474759.1| uracil-DNA glycosylase superfamily protein [Brucella sp. BO2]
 gi|306287837|gb|EFM59260.1| uracil-DNA glycosylase superfamily protein [Brucella sp. BO2]
          Length = 223

 Score = 48.6 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 44/147 (29%), Gaps = 22/147 (14%)

Query: 105 TEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEI-------------MRTQ 149
            E   L+I+G  P     N +G+PF+G   G +L   L                      
Sbjct: 42  DEDVRLLIVGLAPGLRGANRTGRPFTGDYAGELLYSTLCEFGFATGKFEARPDDSLRLLD 101

Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FFNNDA 206
             I       PP N+ + +      + +        +   ++ +G           +   
Sbjct: 102 ACIVNAVRCVPPENKPIGSEINNCRQFLTPMLTRFPNLDAVVTLGTIAHQSTVRALDVPV 161

Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVH 233
            +     GK +++      +   ++ H
Sbjct: 162 SRHPFGHGKATDI----GPLRIFSSYH 184


>gi|145633772|ref|ZP_01789496.1| predicted uracil-DNA glycosylase [Haemophilus influenzae 3655]
 gi|145635655|ref|ZP_01791352.1| predicted uracil-DNA glycosylase [Haemophilus influenzae PittAA]
 gi|229845211|ref|ZP_04465345.1| hypothetical protein CGSHi6P18H1_03141 [Haemophilus influenzae
           6P18H1]
 gi|144985343|gb|EDJ92173.1| predicted uracil-DNA glycosylase [Haemophilus influenzae 3655]
 gi|145267128|gb|EDK07135.1| predicted uracil-DNA glycosylase [Haemophilus influenzae PittAA]
 gi|229811922|gb|EEP47617.1| hypothetical protein CGSHi6P18H1_03141 [Haemophilus influenzae
           6P18H1]
          Length = 195

 Score = 48.6 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/164 (12%), Positives = 47/164 (28%), Gaps = 15/164 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + I+G  P      S   ++ K+G  L + L           +  + P       
Sbjct: 33  PKTARINIVGQAPGLKAEQSRLYWNDKSGERLREWLGVDYDYFYNSGMFSVLPMDFYYPG 92

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    R   M    L + ++ + IG   + ++   +       +  +   
Sbjct: 93  KGKSGDLPPRQGFAERWHPMILGHLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQF 152

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258
                    +  VHP       + + P  ++     L  L K +
Sbjct: 153 LPHF-----MPLVHPSPRNQLWITKNPWFEEQVIPELQILVKQI 191


>gi|6831713|sp|O86222|Y220B_HAEIN RecName: Full=Uncharacterized protein HI_0220.2
 gi|3212185|gb|AAC21888.1| predicted coding region HI0220.2 [Haemophilus influenzae Rd KW20]
          Length = 214

 Score = 48.6 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/164 (13%), Positives = 48/164 (29%), Gaps = 15/164 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + I+G  P      S   ++ K+G+ L + L           I  + P       
Sbjct: 52  PKTARINIVGQAPGLKAEQSRLYWNDKSGDRLREWLGVDYDYFYNSGIFAVLPMDFYYPG 111

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    R   M    L + ++ + IG   + ++   +       +  +   
Sbjct: 112 YGKSGDLPPRQGFAERWHPMILGNLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQF 171

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258
                    +  VHP       + + P  ++     L  L K +
Sbjct: 172 LPHF-----MPLVHPSPRNQLWVTKNPWFEEQVIPELQILVKQI 210


>gi|145628533|ref|ZP_01784333.1| GTP cyclohydrolase II [Haemophilus influenzae 22.1-21]
 gi|145639719|ref|ZP_01795321.1| predicted uracil-DNA glycosylase [Haemophilus influenzae PittII]
 gi|144979003|gb|EDJ88689.1| GTP cyclohydrolase II [Haemophilus influenzae 22.1-21]
 gi|145271087|gb|EDK11002.1| predicted uracil-DNA glycosylase [Haemophilus influenzae PittII]
 gi|309750362|gb|ADO80346.1| Conserved hypothetical protein [Haemophilus influenzae R2866]
          Length = 195

 Score = 48.6 bits (114), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 22/164 (13%), Positives = 48/164 (29%), Gaps = 15/164 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + I+G  P      S   ++ K+G+ L + L           I  + P       
Sbjct: 33  PKTARINIVGQAPGLKAEQSRLYWNDKSGDRLREWLGVDYDYFYNSGIFAVLPMDFYYPG 92

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    R   M    L + ++ + IG   + ++   +       +  +   
Sbjct: 93  KGKSGDLPPRQGFAERWHPMILGNLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQF 152

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258
                    +  VHP       + + P  ++     L  L K +
Sbjct: 153 LPHF-----MPLVHPSPRNQLWVTKNPWFEEQVIPELQILVKQI 191


>gi|296112143|ref|YP_003622525.1| predicted uracil-DNA glycosylase [Leuconostoc kimchii IMSNU 11154]
 gi|295833675|gb|ADG41556.1| predicted uracil-DNA glycosylase [Leuconostoc kimchii IMSNU 11154]
          Length = 190

 Score = 48.6 bits (114), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 53/151 (35%), Gaps = 14/151 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPP 161
               +++IIG  PS     SG  +   +G  L K L           +I +  +  ++P 
Sbjct: 28  PPTAEILIIGQAPSLQVQNSGIMWHDASGERLRKWLGIDDDTFYRSGKIGVLPMDFYYPG 87

Query: 162 GNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQK-TYQNLGKWSN 218
             ++      +       +Q+    P  K+ + IG   + ++   D +      + ++  
Sbjct: 88  KAKSGDKPPRKGVAETWHKQLIAEMPNIKLTILIGAYAQRYYLPIDKKDTITHVISEYRI 147

Query: 219 LCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248
               +        VHP    +  +  KKN W
Sbjct: 148 FLPKY-----FPIVHPSP--RNNIWLKKNPW 171


>gi|55823048|ref|YP_141489.1| hypothetical protein str1126 [Streptococcus thermophilus CNRZ1066]
 gi|55739033|gb|AAV62674.1| conserved hypothetical protein [Streptococcus thermophilus
           CNRZ1066]
          Length = 188

 Score = 48.6 bits (114), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 18/165 (10%), Positives = 49/165 (29%), Gaps = 16/165 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + I+G  P      SG  ++  +G+ L   +        +  +  I P       
Sbjct: 26  PKTARINIVGQAPGIQAQESGLYWNDPSGDNLRDWMGVSREEFYESGLFAIVPMDFYFPG 85

Query: 165 NLS-----NIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSN 218
           +         +    +          + ++ + +GN  ++++ +  +       +  + +
Sbjct: 86  HGKSGDLGPRKGFADKWHERVLDLAPNIQLTILVGNYAQHYYLHQKSSTKLTDTVKHYRD 145

Query: 219 LCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258
               +        VHP         + P   K     L  L + +
Sbjct: 146 YLPDY-----FPLVHPSPRNNIWQAKNPWFMKEVLPDLKELVQKI 185


>gi|86605131|ref|YP_473894.1| uracil-DNA glycosylase family protein [Synechococcus sp. JA-3-3Ab]
 gi|86553673|gb|ABC98631.1| putative uracil-DNA glycosylase, family 4 [Synechococcus sp.
           JA-3-3Ab]
          Length = 172

 Score = 48.6 bits (114), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 43/142 (30%), Gaps = 34/142 (23%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSL------------------STICATQTEGQDLMIIGYT 116
                L++ + +   C                           +         L +IG  
Sbjct: 13  QPWAALQAEIVACRRCPRLVAWREAVAQQKVARFCDQLYWGRPVPGFGDVQARLWVIGLA 72

Query: 117 PSDS-DNISGKPFSGKT-GNMLDKML-------------QSIEIMRTQIHISMISPWHPP 161
           P+    N +G+ F+G   G+ L + L             +   +     +IS +    PP
Sbjct: 73  PAAHGGNRTGRVFTGDPSGDWLFRALRRARFANQPISLHREDGLQLRDCYISAVMRCAPP 132

Query: 162 GNRNLSNIEMEICRPIIMRQIE 183
            N   +  E + C   + +++E
Sbjct: 133 QN-RPTAAEAKTCLGYLRQELE 153


>gi|30995363|ref|NP_438390.2| hypothetical protein HI0220.2 [Haemophilus influenzae Rd KW20]
          Length = 195

 Score = 48.6 bits (114), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 22/164 (13%), Positives = 48/164 (29%), Gaps = 15/164 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + I+G  P      S   ++ K+G+ L + L           I  + P       
Sbjct: 33  PKTARINIVGQAPGLKAEQSRLYWNDKSGDRLREWLGVDYDYFYNSGIFAVLPMDFYYPG 92

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    R   M    L + ++ + IG   + ++   +       +  +   
Sbjct: 93  YGKSGDLPPRQGFAERWHPMILGNLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQF 152

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258
                    +  VHP       + + P  ++     L  L K +
Sbjct: 153 LPHF-----MPLVHPSPRNQLWVTKNPWFEEQVIPELQILVKQI 191


>gi|315604996|ref|ZP_07880050.1| uracil DNA glycosylase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315313275|gb|EFU61338.1| uracil DNA glycosylase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 199

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/173 (12%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 99  TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158
            +         +M++G  P      +G  ++ ++G+ L   +              I P 
Sbjct: 33  PLFYAG-PECRIMVVGQAPGRVAEETGIVWNDRSGDRLRDWMGIDRDTFYSSGKLAIVPM 91

Query: 159 HPPGNRNLSNIEMEICRPIIMR-----QIELISPKILLFIGNKTKNFFFN-NDAQKTYQN 212
                    + ++   R    +        +    + + +G      + +   +    + 
Sbjct: 92  DFYFPGTGKSGDLPPRRDFADKWHPRLLSLMPRLDMTILVGAYATRRYLHLPSSASLTET 151

Query: 213 LGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW---HALITLKKALKNL 261
           + ++ +    +        VHP    +  +  KKN W     L  LK+ +  L
Sbjct: 152 VRRYRDYLPTY-----FPLVHPSP--RNQMWMKKNPWFAATVLPDLKERVAAL 197


>gi|162147827|ref|YP_001602288.1| hypothetical protein GDI_2043 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|209542448|ref|YP_002274677.1| hypothetical protein Gdia_0265 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|161786404|emb|CAP55986.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209530125|gb|ACI50062.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 223

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/188 (10%), Positives = 43/188 (22%), Gaps = 35/188 (18%)

Query: 75  CSLHELKSLLRSFHDCH----------LCSTSLSTICATQTEGQDLMIIGYTPSDSDNIS 124
             L  L   +R+   C           L  +S             L+I    P    + +
Sbjct: 6   DDLDALLCQVRACRACADSLPLGPRPILHVSST----------ARLLIASQAPGTRVHET 55

Query: 125 GKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW------HPPGNRNLSNIEMEICRPII 178
           G  F+  +G+ L   L+             + P         P   +             
Sbjct: 56  GISFNDASGDRLRGWLEMDRATFYDSSRVALLPMGLCYPGRLPAGGDRPPRPECAPLWRA 115

Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELI 238
                +   ++ L +G+  +                +         +       HP    
Sbjct: 116 RLLALMPCIRLTLLVGSYAQAAVLGP-------GRVEDRVRNFRALLPHYFPLPHPSW-- 166

Query: 239 QYPLIKKN 246
           +    ++ 
Sbjct: 167 RTGAWERR 174


>gi|260583656|ref|ZP_05851404.1| uracil DNA glycosylase [Granulicatella elegans ATCC 700633]
 gi|260158282|gb|EEW93350.1| uracil DNA glycosylase [Granulicatella elegans ATCC 700633]
          Length = 196

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 55/161 (34%), Gaps = 16/161 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            E   ++IIG  P      S K F  K+G+ L + L   + +  +  +  + P       
Sbjct: 31  PETAKILIIGQAPGLKAQESRKFFWDKSGDRLREWLGIDKTLFYESGLFAVVPMDFYYPG 90

Query: 165 N-----LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSN 218
                     +    +   +    L   + +L +G+  +N++     ++   + +  +S 
Sbjct: 91  KGKSGDKPPRKGFAPKWHPLVLPLLKQVECILLVGSYAQNYYLKETKKENLTETVRSYSE 150

Query: 219 LCTPHSIIPTLATVHPQEL-IQ----YPLIKKNTWHALITL 254
               +        VHP  L I+     P  ++     L  +
Sbjct: 151 YLPKY-----FPLVHPSPLNIRWMKKNPWFEEEVLPELKLI 186


>gi|90420855|ref|ZP_01228760.1| uracil-DNA glycosylase [Aurantimonas manganoxydans SI85-9A1]
 gi|90334830|gb|EAS48602.1| uracil-DNA glycosylase [Aurantimonas manganoxydans SI85-9A1]
          Length = 223

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 44/187 (23%), Gaps = 41/187 (21%)

Query: 84  LRSFHDCHLCS--------------TSLST-----ICATQTEGQDLMIIGYTPSDSD-NI 123
                DC LC                  +      +  +      L+I G  P     N 
Sbjct: 12  AEPSRDCPLCPRLVAFREEWRAKEPDWHNAPVPTLLPPSGAGAVRLLIAGLAPGLRGANR 71

Query: 124 SGKPFSGKT-GNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSNI 169
           +G+PF+G   G++L   L        +               I       PP N+ +   
Sbjct: 72  TGRPFTGDYAGDLLYATLARYGFANDRFAARTDDGLELIDTAIVNAVRCVPPQNKPVGAE 131

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSNLCTPHSII 226
                +    R         ++ +G    +                      +      I
Sbjct: 132 INTCRQFFSGRMATFPKLAAVVTLGRIAHDSTVRALGERPSAAPFGHNAHHMV----GGI 187

Query: 227 PTLATVH 233
              ++ H
Sbjct: 188 AVFSSYH 194


>gi|255619764|ref|XP_002540046.1| conserved hypothetical protein [Ricinus communis]
 gi|223499709|gb|EEF22337.1| conserved hypothetical protein [Ricinus communis]
          Length = 166

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/148 (15%), Positives = 43/148 (29%), Gaps = 31/148 (20%)

Query: 86  SFHDCHLCST------SLST------ICATQTEGQDLMIIGYTPSDSD-NISGKPFSGKT 132
               C   +       S +       +         L+I+G  P  +  N +G+PF+G  
Sbjct: 7   DCRLCPRLANFLDEVKSENPDYFCRPVPPFGAGQPKLLIVGLAPGLNGANRTGRPFTGDY 66

Query: 133 -GNMLDKMLQSIEI-----------------MRTQIHISMISPWHPPGNRNLSNIEMEIC 174
            G +L   LQ+                          I+      PP N+  ++  +   
Sbjct: 67  AGVLLYSTLQTFGFSTSSEPLDASGWANPELSLIDCRITNAVKCLPPANKPETSEVVTCN 126

Query: 175 RPIIMRQIELISPKILLFIGNKTKNFFF 202
             +      L    ++L +GN       
Sbjct: 127 GYLASELAGLSQGAVVLALGNVAHAAVL 154


>gi|304321158|ref|YP_003854801.1| hypothetical protein PB2503_08019 [Parvularcula bermudensis
           HTCC2503]
 gi|303300060|gb|ADM09659.1| hypothetical protein PB2503_08019 [Parvularcula bermudensis
           HTCC2503]
          Length = 184

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 53/175 (30%), Gaps = 21/175 (12%)

Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHP-- 160
               + +    P +  +  GKPF   +G+ L + +   +        I I  ++   P  
Sbjct: 1   MTARIGVFSQAPGNLAHQGGKPFLDPSGDRLRRWMGLTEDQFYGSGLIAIVPMAFCFPGY 60

Query: 161 -------PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQN 212
                   G                +  +     +I+L IG   + +     A +     
Sbjct: 61  DGTGPTGRGGDRPPPRICAEKWRNEIMAMIDDRLEIVLLIGRYAQEWHLGKSAARRLSDA 120

Query: 213 LGKW--SNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW---HALITLKKALKNL 261
           +G+W              L   HP    +     K++ W     +  L++ + ++
Sbjct: 121 VGQWPSHFADADRGGELILPMPHPSW--RNTAWLKRHPWFEAEVIPRLQRRIADV 173


>gi|312885565|ref|ZP_07745202.1| Uracil-DNA glycosylase superfamily [Mucilaginibacter paludis DSM
           18603]
 gi|311301952|gb|EFQ78984.1| Uracil-DNA glycosylase superfamily [Mucilaginibacter paludis DSM
           18603]
          Length = 190

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 64/183 (34%), Gaps = 26/183 (14%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           + +L + +RS   C   L +     + A  +    ++I+G  P      SG P+   +GN
Sbjct: 1   MDKLLAEIRSCTVCRSFLPNVPRPIVQA--SRTSKIVIVGQAPGQKVQNSGIPWDDLSGN 58

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIELISP 187
            L + L   +          +  +   +P     G+         +   ++  Q   I  
Sbjct: 59  ELRRWLGVSKEQFYDPELFALLPMGFCYPGKGTTGDLPPRPECAPLWHKLVFDQTTEI-- 116

Query: 188 KILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKN 246
           ++++ IG    N++  +  + T    +  + +    +     L  VHP      P  K  
Sbjct: 117 RLVILIGQYAHNYYLKDSRKATLTDTVKSFKDYLPHY-----LPLVHPS-----PRNK-- 164

Query: 247 TWH 249
            W 
Sbjct: 165 IWQ 167


>gi|68248828|ref|YP_247940.1| uracil-DNA glycosylase [Haemophilus influenzae 86-028NP]
 gi|68057027|gb|AAX87280.1| predicted uracil-DNA glycosylase [Haemophilus influenzae 86-028NP]
          Length = 214

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/164 (13%), Positives = 47/164 (28%), Gaps = 15/164 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + I+G  P      S   ++ K+G+ L + L           I  + P       
Sbjct: 52  PKTARINIVGQAPGLKAEQSRLYWNDKSGDRLREWLGVDYDYFYNSGIFAVLPMDFYYPG 111

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    R   M    L + ++ + IG   + ++   +       +  +   
Sbjct: 112 KGKSGDLPPRQGFAERWHPMILGNLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQF 171

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258
                    +  VHP         + P  ++     L  L K +
Sbjct: 172 LPHF-----MPLVHPSPRNQLWATKNPWFEEQVIPELQILVKQI 210


>gi|301155916|emb|CBW15386.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
          Length = 193

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/150 (13%), Positives = 46/150 (30%), Gaps = 13/150 (8%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
                + I+G  P      S   ++ K+G+ L + L           +  + P       
Sbjct: 32  PTTARINIVGQAPGIKAQESRLYWNDKSGDRLREWLGVDRDTFYHSGLFAVIPMDFYYPG 91

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    +   +    L + ++ + IG   + ++   +     + +  + + 
Sbjct: 92  KGKSGDLPPRKGFAEKWHPLILANLPNIELTILIGQYAQKYYLPENNLNVTETVHHFRDF 151

Query: 220 CTPHSIIPTLATVHPQELIQYPLI-KKNTW 248
                    L  VHP    +  +  KKN W
Sbjct: 152 LPHF-----LPLVHPSP--RNQIWLKKNPW 174


>gi|126724784|ref|ZP_01740627.1| Uracil-DNA glycosylase [Rhodobacterales bacterium HTCC2150]
 gi|126705948|gb|EBA05038.1| Uracil-DNA glycosylase [Rhodobacterales bacterium HTCC2150]
          Length = 191

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 56/194 (28%), Gaps = 17/194 (8%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           + +L S +++   CH        I         ++I G  P    +  G PF   +G+ L
Sbjct: 1   MDDLVSEMQACMICHDLPLGPKPIF-KINSKAKILIAGQAPGRITHAKGVPFDDPSGDRL 59

Query: 137 DKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK--ILL 191
              L   +        I I  +    P   +         C      +     P+  + L
Sbjct: 60  RDWLGVDRDTFYNDPAIAILPMGLCFPGTGKGGDLPPRPECAIAWRGRALAKMPRLELTL 119

Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKN 246
            IG    ++     A+         +           +   HP       L Q P  + +
Sbjct: 120 IIGRYAIDWHLPEMAKL------TVTKAVEMGKNDNQMILPHPSPRNNRWLKQNPWFEVD 173

Query: 247 TWHALITLKKALKN 260
               L    + L+N
Sbjct: 174 VLPDLRARIERLRN 187


>gi|301168872|emb|CBW28465.1| predicted uracil-DNA glycosylase [Haemophilus influenzae 10810]
          Length = 195

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/164 (13%), Positives = 48/164 (29%), Gaps = 15/164 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + I+G  P      S   ++ K+G+ L + L           I  + P       
Sbjct: 33  PKTARINIVGQAPGLKAEQSRLYWNDKSGDRLREWLGVDYDYFYNSGIFAVLPMDFYYLG 92

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    R   M    L + ++ + IG   + ++   +       +  +   
Sbjct: 93  KGKSGDLPPRQGFAERWHPMILGNLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQF 152

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258
                    +  VHP       + + P  ++     L  L K +
Sbjct: 153 LPHF-----MPLVHPSPRNQLWVTKNPWFEEQVIPELQILVKQI 191


>gi|290580343|ref|YP_003484735.1| hypothetical protein SmuNN2025_0817 [Streptococcus mutans NN2025]
 gi|254997242|dbj|BAH87843.1| hypothetical protein [Streptococcus mutans NN2025]
          Length = 195

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/206 (10%), Positives = 60/206 (29%), Gaps = 40/206 (19%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQ--------DLMIIGYTPSDSDNISGKP 127
           SL E+   + +         S + +   +             + I+G  P      S   
Sbjct: 3   SLEEITKAIMA--------DSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQESRLY 54

Query: 128 FSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP 187
           ++ K+G+ L + +              + P          + ++   +    +      P
Sbjct: 55  WNDKSGDRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRKGFAQK---WHQP 111

Query: 188 --------KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII--PTLATVHPQ-- 235
                   ++ + IGN  + ++ +  +        K ++    +          VHP   
Sbjct: 112 ILDLLPDIQLTILIGNYAQKYYLHQKSSV------KLTDTVAHYKKYLPDYFPLVHPSPR 165

Query: 236 ---ELIQYPLIKKNTWHALITLKKAL 258
               + ++P  +      L  + + +
Sbjct: 166 NQIWMSKHPWFEAQVVPDLKKIIQQI 191


>gi|262067118|ref|ZP_06026730.1| uracil DNA glycosylase family protein [Fusobacterium periodonticum
           ATCC 33693]
 gi|291379173|gb|EFE86691.1| uracil DNA glycosylase family protein [Fusobacterium periodonticum
           ATCC 33693]
          Length = 197

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/196 (11%), Positives = 55/196 (28%), Gaps = 21/196 (10%)

Query: 78  HELKSLLRSFHDCH-LCSTSLS---TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
            +LK L+    +       +      + +   +   ++I+G  P      +   +  K+G
Sbjct: 5   EKLKKLIEDIKNDEENKKYTEQGIDPLFSA-PKEARIVIVGQAPGLKAQENKLYWKDKSG 63

Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL-----SNIEMEICRPIIMRQIELISPK 188
           + L       E      ++  I P                 +    +        L + +
Sbjct: 64  DKLRLWTGIDEKTFYSSNLLAIIPMDFYYPGKGKSGDLPPRKDFGEKWHNKILELLPNVE 123

Query: 189 ILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPL 242
           + + IG   + F+      +   + +  +               VHP       L + P 
Sbjct: 124 LFILIGKYAQEFYLKGRTKENLTETVHSYKEYLP-----KFFPIVHPSPLNIRWLKKNPW 178

Query: 243 IKKNTWHALITLKKAL 258
            +K     L  +   +
Sbjct: 179 FEKEVVPELKEMVTKI 194


>gi|296284701|ref|ZP_06862699.1| hypothetical protein CbatJ_13823 [Citromicrobium bathyomarinum
           JL354]
          Length = 198

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 53/168 (31%), Gaps = 9/168 (5%)

Query: 76  SLHELKSLLRSFHDCHLCST-SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           S   L + + +   C      +   +    +    ++IIG  P    + SG P+   +G+
Sbjct: 2   STETLHADIAACRVCETALGFAPRPVV-QFSSTSRILIIGQAPGSKVHASGIPWDDASGD 60

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KI 189
            L +     +       Q+ +  +   +P             C P+   ++    P  ++
Sbjct: 61  RLREWTGLNRDQMYDAEQVALVPMGFCYPGKASGGDRPPRPECAPLWHERVLAALPDDRL 120

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP-TLATVHPQE 236
            L +G+  +      + +           L T  +     +   HP  
Sbjct: 121 TLLVGSYAQAANL-PETRGWTMARRVEHWLETDGAAFDGAIPLPHPAW 167


>gi|294782841|ref|ZP_06748167.1| uracil DNA glycosylase family protein [Fusobacterium sp. 1_1_41FAA]
 gi|294481482|gb|EFG29257.1| uracil DNA glycosylase family protein [Fusobacterium sp. 1_1_41FAA]
          Length = 197

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/165 (12%), Positives = 46/165 (27%), Gaps = 16/165 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   ++I+G  P      +   +  K+G+ L       E      ++  I P       
Sbjct: 35  PKEARIVIVGQAPGLKAQENKLYWKDKSGDKLRLWTGIDEKTFYSSNLLAIIPMDFYYPG 94

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSN 218
                     +    +        L + ++ + IG   + F+      +   + +  +  
Sbjct: 95  KGKSGDLPPRKDFGEKWHNKILELLPNVELFILIGKYAQEFYLNGRTKENLTETVHSYKE 154

Query: 219 LCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258
                        VHP       L + P  +K     L  +   +
Sbjct: 155 YLP-----KFFPIVHPSPLNIGWLKKNPWFEKEVVPELKEMVTKI 194


>gi|225549238|ref|ZP_03770211.1| conserved hypothetical protein [Borrelia burgdorferi 94a]
 gi|225370096|gb|EEG99536.1| conserved hypothetical protein [Borrelia burgdorferi 94a]
 gi|312147965|gb|ADQ30624.1| conserved hypothetical protein [Borrelia burgdorferi JD1]
          Length = 199

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 18/135 (13%)

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR----------QIEL 184
           +L+  LQ   I    I       +    +R++     +       +          +I  
Sbjct: 71  LLNNSLQEKGINDHIIIYVNK-NYLNEPSRDIITKWCKSINIYNYKIIDTIESLNLEISN 129

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK 244
            +PK +L    +  +FF N   +           +      IP + T  P   I+ P +K
Sbjct: 130 KNPKAILSC--EEIDFFLNQPLRIHI-----VRGIELRFKGIPLVFTYLPTNQIKNPELK 182

Query: 245 KNTWHALITLKKALK 259
           K  W  L  +K  +K
Sbjct: 183 KEIWQDLKIIKGIIK 197


>gi|195941753|ref|ZP_03087135.1| hypothetical protein Bbur8_02589 [Borrelia burgdorferi 80a]
 gi|218249391|ref|YP_002374547.1| hypothetical protein BbuZS7_0013 [Borrelia burgdorferi ZS7]
 gi|223889084|ref|ZP_03623673.1| conserved hypothetical protein [Borrelia burgdorferi 64b]
 gi|224532560|ref|ZP_03673183.1| conserved hypothetical protein [Borrelia burgdorferi WI91-23]
 gi|224533904|ref|ZP_03674489.1| conserved hypothetical protein [Borrelia burgdorferi CA-11.2a]
 gi|226322072|ref|ZP_03797597.1| conserved hypothetical protein [Borrelia burgdorferi Bol26]
 gi|218164579|gb|ACK74640.1| conserved hypothetical protein [Borrelia burgdorferi ZS7]
 gi|223885333|gb|EEF56434.1| conserved hypothetical protein [Borrelia burgdorferi 64b]
 gi|224512503|gb|EEF82881.1| conserved hypothetical protein [Borrelia burgdorferi WI91-23]
 gi|224512907|gb|EEF83273.1| conserved hypothetical protein [Borrelia burgdorferi CA-11.2a]
 gi|226232662|gb|EEH31416.1| conserved hypothetical protein [Borrelia burgdorferi Bol26]
          Length = 199

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 18/135 (13%)

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR----------QIEL 184
           +L+  LQ   I    I       +    +R++     +       +          +I  
Sbjct: 71  LLNNSLQEKGINDHIIIYVNK-NYLNEPSRDIITKWCKSINIYNYKIIDTIESLNLEISN 129

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK 244
            +PK +L    +  +FF N   +           +      IP + T  P   I+ P +K
Sbjct: 130 KNPKAILSC--EEIDFFLNQPLRIHI-----VRGIELRFKGIPLVFTYLPTNQIKNPELK 182

Query: 245 KNTWHALITLKKALK 259
           K  W  L  +K  +K
Sbjct: 183 KEIWQDLKIIKGIIK 197


>gi|332638089|ref|ZP_08416952.1| Uracil-DNA glycosylase [Weissella cibaria KACC 11862]
          Length = 192

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 46/146 (31%), Gaps = 14/146 (9%)

Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP--WHPPGN 163
               ++IIG  P      +G  F+ K+G+ L + +           +  + P  ++ PG 
Sbjct: 31  PTVKILIIGQAPGAVVEQTGILFNDKSGDRLREWMGIDRTTFYDSGLIGVLPMDFYFPGK 90

Query: 164 RNLSNIEMEICRPIIMRQI---ELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220
               ++           Q     +   +++L +G   +  +    A ++  +        
Sbjct: 91  GKRGDLPPRKFVAGEWHQRLLDTMPDIELILLVGKYAQQHYLPIKASESLTS----VVHR 146

Query: 221 TPHSIIPTLATVHPQ-----ELIQYP 241
                   L   HP       L + P
Sbjct: 147 FADFGPRYLPLAHPSPLNNIWLAKNP 172


>gi|294084109|ref|YP_003550867.1| uracil-DNA glycosylase superfamily protein [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292663682|gb|ADE38783.1| Uracil-DNA glycosylase superfamily [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 227

 Score = 47.8 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 57/184 (30%), Gaps = 35/184 (19%)

Query: 85  RSFHDCH-----LCSTSLS-------TICATQTEGQDLMIIGYTPS-DSDNISGKPFSGK 131
                C      L + + +        + A  +    ++I+G  P     N +G+PF+G 
Sbjct: 13  ADCALCPRLHDYLQTYAKTHPEWHNAPVDAMGSLKAQVLIVGLAPGLKGANATGRPFTGD 72

Query: 132 T-GNMLDKML-------------QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177
           + G  L +ML              +  I    + I+      PP N+  +         +
Sbjct: 73  SAGGYLFEMLGRFGMAHGAYGGHANDGIRLDDVRITNAVRCVPPQNKPSAVETHNCRPFL 132

Query: 178 IMRQIELISPKILLFIGNKTKNFFF---NNDAQKTYQNLGKWSNL-----CTPHSIIPTL 229
           +   + + + K++L +G    +           +          +           +  +
Sbjct: 133 VGEIMAMANLKVVLALGRLAHDAVLRATGYRYAEYLFTHASHHQIVSKMADGNARKLQLI 192

Query: 230 ATVH 233
           ++ H
Sbjct: 193 SSYH 196


>gi|312149498|gb|ADQ29569.1| conserved hypothetical protein [Borrelia burgdorferi N40]
          Length = 199

 Score = 47.8 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 18/135 (13%)

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR----------QIEL 184
           +L+  LQ   I    I       +    +R++     +       +          +I  
Sbjct: 71  LLNNSLQEKGIKDHIIIYVNK-NYLNEPSRDIITKWCKSINIYNYKIIDTIESLNLEISN 129

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK 244
            +PK +L    +  +FF N   +           +      IP + T  P   I+ P +K
Sbjct: 130 KNPKAILSC--EEIDFFLNQPLRIHI-----VRGIELRFKGIPLVFTYLPTNQIKNPELK 182

Query: 245 KNTWHALITLKKALK 259
           K  W  L  +K  +K
Sbjct: 183 KEIWQDLKIIKGIIK 197


>gi|261868208|ref|YP_003256130.1| uracil-DNA glycosylase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413540|gb|ACX82911.1| uracil-DNA glycosylase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 193

 Score = 47.8 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/164 (12%), Positives = 49/164 (29%), Gaps = 15/164 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
             G  + ++G  P      +   ++ K+G+ L + L           +  + P       
Sbjct: 32  PTGARINVVGQAPGVKAEQTRLYWNDKSGDRLREWLDVDRETFYHSGLFAVLPMDFYYPG 91

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    +        L + ++ + IG   + ++   + +   + +  +   
Sbjct: 92  KGKSGDLPPRKGFAEKWHPSILTGLPNIELTIVIGQYAQQYYLPQNKRNVTETVKNYREF 151

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258
                    L  VHP       L + P   ++    L  L K +
Sbjct: 152 LPHF-----LPLVHPSPRNQLWLAKNPWFMQDVVPTLQQLVKQI 190


>gi|216264304|ref|ZP_03436296.1| conserved hypothetical protein [Borrelia burgdorferi 156a]
 gi|226321157|ref|ZP_03796698.1| conserved hypothetical protein [Borrelia burgdorferi 29805]
 gi|215980777|gb|EEC21584.1| conserved hypothetical protein [Borrelia burgdorferi 156a]
 gi|226233449|gb|EEH32189.1| conserved hypothetical protein [Borrelia burgdorferi 29805]
          Length = 199

 Score = 47.8 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 18/135 (13%)

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR----------QIEL 184
           +L+  LQ   I    I       +    +R++     +       +          +I  
Sbjct: 71  LLNNSLQEKGIKDHIIIYVNK-NYLNEPSRDIITKWCKSINIYNYKIIDTIESLNLEISN 129

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK 244
            +PK +L    +  +FF N   +           +      IP + T  P   I+ P +K
Sbjct: 130 KNPKAILSC--EEIDFFLNQPLRIHI-----VRGIELRFKGIPLVFTYLPTNQIKNPELK 182

Query: 245 KNTWHALITLKKALK 259
           K  W  L  +K  +K
Sbjct: 183 KEIWQDLKIIKGIIK 197


>gi|225551919|ref|ZP_03772859.1| conserved hypothetical protein [Borrelia sp. SV1]
 gi|225370917|gb|EEH00347.1| conserved hypothetical protein [Borrelia sp. SV1]
          Length = 199

 Score = 47.8 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 18/135 (13%)

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR----------QIEL 184
           +L+  LQ   I    I       +    +R++     +       +          +I  
Sbjct: 71  LLNNSLQEKGISDHIIIYVNK-NYLNEPSRDIITKWCKSINIYNYKIIDTIESLNLEISN 129

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK 244
            +PK +L    +  +FF N   +           +      IP + T  P   I+ P +K
Sbjct: 130 KNPKAILSC--EEIDFFLNQPLRIHI-----VRGIELRFKGIPLVFTYLPTNQIKNPELK 182

Query: 245 KNTWHALITLKKALK 259
           K  W  L  +K  +K
Sbjct: 183 KEIWQDLKIIKGIIK 197


>gi|145631978|ref|ZP_01787730.1| predicted uracil-DNA glycosylase [Haemophilus influenzae R3021]
 gi|144982362|gb|EDJ89942.1| predicted uracil-DNA glycosylase [Haemophilus influenzae R3021]
          Length = 195

 Score = 47.8 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/164 (12%), Positives = 48/164 (29%), Gaps = 15/164 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + I+G  P      S   ++ K+G+ L + L           +  + P       
Sbjct: 33  PKTARINIVGQAPGLKAEQSRLYWNDKSGDRLREWLGVDYDYFYNSGMLAVLPMDFYYPG 92

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    R   M    L + ++ + IG   + ++   +       +  +   
Sbjct: 93  KGKSGDLPPRQGFAERWHPMILGHLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQF 152

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258
                    +  VHP       + + P  ++     L  L K +
Sbjct: 153 LPHF-----MPLVHPSPRNQLWVTKNPWFEEQVIPELQILVKQI 191


>gi|110633297|ref|YP_673505.1| uracil-DNA glycosylase superfamily protein [Mesorhizobium sp. BNC1]
 gi|110284281|gb|ABG62340.1| Uracil-DNA glycosylase superfamily [Chelativorans sp. BNC1]
          Length = 220

 Score = 47.8 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 49/184 (26%), Gaps = 42/184 (22%)

Query: 88  HDCHLCSTSLSTICAT-------------------QTEGQDLMIIGYTPSDSD-NISGKP 127
            DC LC    S I                        +   L+I+G  P     N +G+P
Sbjct: 12  RDCPLCPRLHSFIAGWREKEPEWFNAPVHTFLPTGGEQAVRLLIVGLAPGLRGANRTGRP 71

Query: 128 FSGKT-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEI 173
           F+G   G +L   L                    T + I+      PP N+  ++     
Sbjct: 72  FTGDYAGMLLYGTLIRFGFASGRFEARPDDGLSLTDVAITNAVRCVPPENKPETSEIRTC 131

Query: 174 CRPIIM-RQIELISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSNLCTPHSIIPTL 229
               +        + K ++ +G    +       +         G           +   
Sbjct: 132 RDYFLTPTIKRFPNLKGIVTLGKIAHDSTVRALGHRVSAIPFIHG----AEEQAGDLRIF 187

Query: 230 ATVH 233
           ++ H
Sbjct: 188 SSYH 191


>gi|167957410|ref|ZP_02544484.1| Uracil-DNA glycosylase [candidate division TM7 single-cell isolate
           TM7c]
          Length = 193

 Score = 47.8 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/161 (13%), Positives = 57/161 (35%), Gaps = 15/161 (9%)

Query: 109 DLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSN 168
            ++++G  P      + KP++  +G +L + L   +       +  + P          +
Sbjct: 36  RIVLVGQAPGRIAQQTLKPWNDASGRLLRRWLNVTDKQFYNPDLFALMPIDFYYPGRGVH 95

Query: 169 IEMEICRPIIMR-----QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPH 223
            ++        +       ++ + ++ + +G+  + ++ +  A +         N+  P 
Sbjct: 96  GDLPPRLDFARKWHPRLLAQMSNIRLTILVGSYAQKYYLDRHANQNLTATVADFNMYLPD 155

Query: 224 SIIPTLATVHPQEL-----IQYPLIKKNTWHALITL-KKAL 258
                   VHP  L      + P  + +    L T+ K+ L
Sbjct: 156 Y----FPLVHPSPLNIGWRKRNPWFESDVIPVLQTIVKEVL 192


>gi|145641564|ref|ZP_01797142.1| predicted uracil-DNA glycosylase [Haemophilus influenzae R3021]
 gi|145273855|gb|EDK13723.1| predicted uracil-DNA glycosylase [Haemophilus influenzae 22.4-21]
          Length = 195

 Score = 47.8 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/164 (12%), Positives = 47/164 (28%), Gaps = 15/164 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + I+G  P      S   ++ K+G  L + L           +  + P       
Sbjct: 33  PKTARINIVGQAPGLKAEQSRLYWNDKSGERLREWLGVDYDYFYNSGMFSVLPMDFYYPG 92

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    R   M    L + ++ + IG   + ++   +       +  +   
Sbjct: 93  KGKSGDLPPRQGFAERWHPMILGHLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQF 152

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258
                    +  VHP       + + P  ++     L  L K +
Sbjct: 153 LPHF-----IPLVHPSPRNQLWITKNPWFEEQVIPELQILVKQI 191


>gi|145637394|ref|ZP_01793054.1| predicted uracil-DNA glycosylase [Haemophilus influenzae PittHH]
 gi|148825519|ref|YP_001290272.1| hypothetical protein CGSHiEE_02100 [Haemophilus influenzae PittEE]
 gi|229847398|ref|ZP_04467499.1| hypothetical protein CGSHi7P49H1_00870 [Haemophilus influenzae
           7P49H1]
 gi|145269486|gb|EDK09429.1| predicted uracil-DNA glycosylase [Haemophilus influenzae PittHH]
 gi|148715679|gb|ABQ97889.1| hypothetical protein CGSHiEE_02100 [Haemophilus influenzae PittEE]
 gi|229809724|gb|EEP45449.1| hypothetical protein CGSHi7P49H1_00870 [Haemophilus influenzae
           7P49H1]
          Length = 195

 Score = 47.8 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/164 (12%), Positives = 47/164 (28%), Gaps = 15/164 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + I+G  P      S   ++ K+G  L + L           +  + P       
Sbjct: 33  PKTARINIVGQAPGLKAEQSRLYWNDKSGERLREWLGVDYDYFYNSGMFSVLPMDFYYPG 92

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    R   M    L + ++ + IG   + ++   +       +  +   
Sbjct: 93  KGKSGDLPPRQGFAERWHPMILGHLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQF 152

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258
                    +  VHP       + + P  ++     L  L K +
Sbjct: 153 LPHF-----IPLVHPSPRNQLWITKNPWFEEQVIPELQILVKQI 191


>gi|325845846|ref|ZP_08169044.1| uracil-DNA glycosylase family protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325481752|gb|EGC84784.1| uracil-DNA glycosylase family protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 190

 Score = 47.8 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 55/171 (32%), Gaps = 21/171 (12%)

Query: 79  ELKSLLRSFHDCHLCSTSLSTICATQ-----TEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
           +++ ++          T               +   ++IIG  P      SG  F+ K+G
Sbjct: 2   QIEKIIEKLKADPRNKTYTKR--GIGPIFQFNKNAKILIIGQAPGKKVEESGILFNDKSG 59

Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE------LISP 187
             L   L  I +         I P          + + +  R  I ++        L + 
Sbjct: 60  ENLVDWL-GISMNTLHGENFSIIPMDFYYPGKDKSGD-KAPRKFIAKEYHPLLLEELKNI 117

Query: 188 KILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQEL 237
            + + IG   + F+  +D +K   + +  + +    +        VHP  L
Sbjct: 118 NLTILIGAYAQKFYLKDDFKKNLTETVRNFKDYLPEY-----FPLVHPSPL 163


>gi|148827360|ref|YP_001292113.1| uracil-DNA glycosylase [Haemophilus influenzae PittGG]
 gi|148718602|gb|ABQ99729.1| predicted uracil-DNA glycosylase [Haemophilus influenzae PittGG]
          Length = 195

 Score = 47.8 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/164 (12%), Positives = 47/164 (28%), Gaps = 15/164 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + I+G  P      S   ++ K+G+ L + L           +  + P       
Sbjct: 33  PKTARINIVGQAPGLKAEQSRLYWNDKSGDRLREWLGVDYDYFYNSGMFSVLPMDFYYPG 92

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    R   M    L + ++ + IG   + ++   +       +  +   
Sbjct: 93  KGKSGDLPPRQGFAERWHPMILGNLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQF 152

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258
                    +  VHP         + P  ++     L  L K +
Sbjct: 153 LPHF-----MPLVHPSPRNQLWATKNPWFEEQVIPELQILVKQI 191


>gi|225549703|ref|ZP_03770668.1| conserved hypothetical protein [Borrelia burgdorferi 118a]
 gi|225369663|gb|EEG99111.1| conserved hypothetical protein [Borrelia burgdorferi 118a]
          Length = 199

 Score = 47.8 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 18/135 (13%)

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR----------QIEL 184
           +L+  LQ   I    I       +    +R++     +       +          +I  
Sbjct: 71  LLNNSLQEKGINDQIIIYVNK-NYLNEPSRDIITKWCKSINIYNYKIIDTIESLNLEISN 129

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK 244
            +PK +L    +  +FF N   +           +      IP + T  P   I+ P +K
Sbjct: 130 KNPKAILSC--EEIDFFLNQPLRIHI-----VRGIELRFKGIPLVFTYLPTNQIKNPELK 182

Query: 245 KNTWHALITLKKALK 259
           K  W  L  +K  +K
Sbjct: 183 KEIWQDLKIIKGIIK 197


>gi|15594359|ref|NP_212147.1| hypothetical protein BB0013 [Borrelia burgdorferi B31]
 gi|3915321|sp|O51046|Y013_BORBU RecName: Full=Uncharacterized protein BB_0013
 gi|2687890|gb|AAC66401.1| predicted coding region BB0013 [Borrelia burgdorferi B31]
          Length = 199

 Score = 47.8 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 18/135 (13%)

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR----------QIEL 184
           +L+  LQ   I    I       +    +R++     +       +          +I  
Sbjct: 71  LLNNSLQEKGINDQIIIYVNK-NYLNEPSRDIITKWCKSINIYNYKIIDTIESLNLEISN 129

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK 244
            +PK +L    +  +FF N   +           +      IP + T  P   I+ P +K
Sbjct: 130 KNPKAILSC--EEIDFFLNQPLRIHI-----VRGIELRFKGIPLVFTYLPTNQIKNPELK 182

Query: 245 KNTWHALITLKKALK 259
           K  W  L  +K  +K
Sbjct: 183 KEIWQDLKIIKGIIK 197


>gi|293391723|ref|ZP_06636057.1| uracil-DNA glycosylase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290952257|gb|EFE02376.1| uracil-DNA glycosylase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 193

 Score = 47.8 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/164 (12%), Positives = 49/164 (29%), Gaps = 15/164 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
             G  + ++G  P      +   ++ K+G+ L + L           +  + P       
Sbjct: 32  PTGARINVVGQAPGVKAEQTRLYWNDKSGDRLREWLDVDRETFYHSGLFAVLPMDFYYPG 91

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    +        L + ++ + IG   + ++   + +   + +  +   
Sbjct: 92  KGKSGDLPPRKGFAEKWHPSILAGLPNIELTIVIGQYAQQYYLPQNKRNVTETVKNYREF 151

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258
                    L  VHP       L + P   ++    L  L K +
Sbjct: 152 LPHF-----LPLVHPSPRNQLWLAKNPWFMQDVVPTLQQLVKQI 190


>gi|221217372|ref|ZP_03588843.1| conserved hypothetical protein [Borrelia burgdorferi 72a]
 gi|221192650|gb|EEE18866.1| conserved hypothetical protein [Borrelia burgdorferi 72a]
          Length = 199

 Score = 47.4 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 18/135 (13%)

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMR----------QIEL 184
           +L+  LQ   I    I       +    +R++     +       +          +I  
Sbjct: 71  LLNNSLQEKGIKDQIIIYVNK-NYLNEPSRDIITKWCKSINIYNYKIIDTIESLNLEISN 129

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK 244
            +PK +L    +  +FF N   +           +      IP + T  P   I+ P +K
Sbjct: 130 KNPKAILSC--EEIDFFLNQPLRIHI-----VRGIELRFKGIPLVFTYLPTNQIKNPELK 182

Query: 245 KNTWHALITLKKALK 259
           K  W  L  +K  +K
Sbjct: 183 KEIWQDLKIIKGIIK 197


>gi|34497814|ref|NP_902029.1| uracil-DNA glycosylase [Chromobacterium violaceum ATCC 12472]
 gi|34103670|gb|AAQ60031.1| probable uracil-DNA glycosylase [Chromobacterium violaceum ATCC
           12472]
          Length = 193

 Score = 47.4 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 49/174 (28%), Gaps = 15/174 (8%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           L +L   + +   C                G  +++ G  P    + SG P+   +G  L
Sbjct: 4   LADLLGEIAACRVCEAALPCGPRPALRAAAGARILLAGQAPGRKVHESGVPWDDASGKRL 63

Query: 137 DKML---QSIEIMRTQIHISMISPWHP-PGNRNLSNIEMEICRPIIMRQIE-LISPKILL 191
            + L              I  +   +P  G         E  R    R +  L   +++L
Sbjct: 64  REWLAVDAETFYDPECFAIVPMGFCYPGTGPSGDLPPRPECRRLWHPRLLPLLERVELVL 123

Query: 192 FIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQY 240
            +G   + +      +   + +  W            +   HP       L + 
Sbjct: 124 AVGYYAQAYHLAARKRSLTETVAAWREYFPA-----VMPLPHPSPRNQMWLARN 172


>gi|237740077|ref|ZP_04570558.1| uracil-DNA glycosylase [Fusobacterium sp. 2_1_31]
 gi|229422094|gb|EEO37141.1| uracil-DNA glycosylase [Fusobacterium sp. 2_1_31]
          Length = 197

 Score = 47.4 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/198 (11%), Positives = 54/198 (27%), Gaps = 21/198 (10%)

Query: 78  HELKSLLRSFHDCH-LCSTSLS---TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
            +LK L+    +       +      + +   +   ++I+G  P      +   +  K+G
Sbjct: 5   EKLKKLIEDIKNDEENKKYTEQGIDPLFSA-PKEARIVIVGQAPGLKAQENKLYWKDKSG 63

Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL-----SNIEMEICRPIIMRQIELISPK 188
           + L       E      ++  I P                 +    +        L   +
Sbjct: 64  DKLRLWTGIDEKTFYSSNLLAIIPMDFYYPGKGKSGDLPPRKDFGEKWHNKILELLPDVE 123

Query: 189 ILLFIGNKTKNFFF-NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPL 242
           + + IG   + F+      +   + +  +               VHP       L + P 
Sbjct: 124 LFILIGKYAQEFYLKGRTKENLTETVHSYKEYLP-----KFFPIVHPSPLNIRWLKKNPW 178

Query: 243 IKKNTWHALITLKKALKN 260
            +K     L  +   +  
Sbjct: 179 FEKEVVPELKEMVTKIME 196


>gi|90424131|ref|YP_532501.1| uracil-DNA glycosylase superfamily protein [Rhodopseudomonas
           palustris BisB18]
 gi|90106145|gb|ABD88182.1| Uracil-DNA glycosylase superfamily [Rhodopseudomonas palustris
           BisB18]
          Length = 226

 Score = 47.4 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/164 (13%), Positives = 41/164 (25%), Gaps = 33/164 (20%)

Query: 88  HDCHLC----------STS-----LSTICATQTEGQDLMIIGYTPSDSD-NISGKPFSGK 131
            +C LC                   + +         L+I+G  P     N +G+PF+G 
Sbjct: 11  RNCPLCPRLVDYRLAVRARAPDWFNAPVPTFGDPDAALLIVGLAPGVQGANRTGRPFTGD 70

Query: 132 T-GNMLDKMLQSIEI-------------MRTQIHISMISPWHPPGNRNLSNIEMEICRPI 177
             G++L   L                        I+      PP N+          + +
Sbjct: 71  FAGDLLYATLIEHGFAKGVYQARPDDGLRLVDCRIANAVRCVPPQNKPRPVEINTCRQFL 130

Query: 178 IMRQIELISPKILLFIGNKTKNF---FFNNDAQKTYQNLGKWSN 218
                 +     ++ +G    +         A       G    
Sbjct: 131 SAVLETMPRLTAIVALGRVAHDSTVKALGLRASAAPFGHGAVHT 174


>gi|315640240|ref|ZP_07895357.1| uracil-DNA glycosylase [Enterococcus italicus DSM 15952]
 gi|315483902|gb|EFU74381.1| uracil-DNA glycosylase [Enterococcus italicus DSM 15952]
          Length = 191

 Score = 47.4 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/166 (10%), Positives = 50/166 (30%), Gaps = 15/166 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPP 161
                ++IIG  P      S   +  ++G  L   L            + I  +  ++P 
Sbjct: 31  HPEAKVVIIGQAPGKKAQASQIVWHDQSGKRLRSWLGLSDETFYQSHDLAILPMDFYYPG 90

Query: 162 GNRNL--SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
             +       +    +   +    +   ++++ +G   + ++  ++       + ++   
Sbjct: 91  KGKTGDLPPRKAFAAKWHPLCLKLMPDVQLIILVGRYAQAYYLPHNKANLTTTVQQFQTF 150

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKN 260
              +         HP       L + P  ++     L  +   L N
Sbjct: 151 LPQY-----FPLPHPSPLNGRWLKKNPWFEQTVVPQLKEIIATLVN 191


>gi|260582440|ref|ZP_05850232.1| uracil-DNA glycosylase [Haemophilus influenzae NT127]
 gi|260094591|gb|EEW78487.1| uracil-DNA glycosylase [Haemophilus influenzae NT127]
          Length = 214

 Score = 47.4 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/164 (13%), Positives = 48/164 (29%), Gaps = 15/164 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + I+G  P      S   ++ K+G  L + L           +  + P       
Sbjct: 52  PKTARINIVGQAPGLKAEQSRLYWNDKSGERLREWLGVDYDYFYNSGMFSVLPMDFYYPG 111

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    R   M    L + ++ + IG   + ++   +       +  +  L
Sbjct: 112 KGKSGDLPPRQGFAERWHPMILGHLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQL 171

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258
                    +  VHP       + + P  ++     L  L K +
Sbjct: 172 LPHF-----IPLVHPSPRNQLWITKNPWFEEQVIPELQILVKQI 210


>gi|229828037|ref|ZP_04454106.1| hypothetical protein GCWU000342_00086 [Shuttleworthia satelles DSM
           14600]
 gi|229792631|gb|EEP28745.1| hypothetical protein GCWU000342_00086 [Shuttleworthia satelles DSM
           14600]
          Length = 195

 Score = 47.4 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 45/139 (32%), Gaps = 10/139 (7%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML--QSIEIMRTQIHISMISPWHP-- 160
            +   ++IIG  P      S  PF+ K+G  L   +          +I I  +  + P  
Sbjct: 32  HKEARILIIGQAPGKKVEESLIPFNDKSGEKLMDWMGIDRDTFYSERIAIMPMDFYFPGK 91

Query: 161 --PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218
              G+ +    +             +   ++ + IG    +++   DA++      +   
Sbjct: 92  SASGSGDKPPRKFIAQEYHQEILAYMDQIQLTIIIGKYAMDYYLGKDAKRNLTETVRAYQ 151

Query: 219 LCTPHSIIPTLATVHPQEL 237
              P         VHP  L
Sbjct: 152 EYLP----KYFPIVHPSPL 166


>gi|325067732|ref|ZP_08126405.1| Uracil-DNA glycosylase superfamily protein [Actinomyces oris K20]
          Length = 120

 Score = 47.4 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 7/99 (7%), Positives = 21/99 (21%), Gaps = 19/99 (19%)

Query: 42  KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL---- 97
                    +         +        +A  +  L EL + +     C           
Sbjct: 15  PVPPGTGWPEDPATAATPVARSAADVARLADSSSDLPELDARITVCRACDRLVAWREEVA 74

Query: 98  ---------------STICATQTEGQDLMIIGYTPSDSD 121
                            + +  +    + ++G  P+ + 
Sbjct: 75  RTGRRASFAHEPYWGRPVASVGSADARIYVVGLAPAANG 113


>gi|116326514|ref|YP_794194.1| Uracil-DNA glycosylase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116098013|gb|ABJ63163.1| Uracil-DNA glycosylase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 190

 Score = 47.0 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/166 (12%), Positives = 51/166 (30%), Gaps = 18/166 (10%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
           +E   L+IIG  P      SG  +   +G+ L + +   +          + P       
Sbjct: 28  SEKAKLVIIGQAPGLRVQNSGIMWDDASGDRLREWIGVGKDTFYNSGKIGVIPMDFYYPG 87

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                          +        +   ++++ +G+  + ++ N   Q       K +++
Sbjct: 88  KGKWGDLPPRRGVANKWHPKLLELMPDVQLIILVGSYAQKYYLNLGYQS------KITDV 141

Query: 220 CTPHSII-PT-LATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258
              +    P     VHP       + + P  ++     L  +   +
Sbjct: 142 IKNYKNYLPLYFPIVHPSPRNNIWIKKNPWFEQEVVPELKEIISKI 187


>gi|296100322|ref|YP_003620491.1| hypothetical protein LKI_10716 [Leuconostoc kimchii IMSNU 11154]
 gi|295831639|gb|ADG39522.1| hypothetical protein LKI_10716 [Leuconostoc kimchii IMSNU 11154]
          Length = 190

 Score = 47.0 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/164 (12%), Positives = 49/164 (29%), Gaps = 18/164 (10%)

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL 166
              L+IIG  P      SG  +   +G+ L + +   +          + P         
Sbjct: 30  KAKLVIIGQAPGLRVQNSGIMWDDASGDRLREWIGVGKDTFYNSGKIGVIPMDFYYPGKG 89

Query: 167 -----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221
                        +        +   ++++ +G+  + ++ N   Q       K +++  
Sbjct: 90  KWGDLPPRRGVANKWHPKLLELMPDVQLIILVGSYAQKYYLNLGYQS------KITDVIK 143

Query: 222 PHSII-PT-LATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258
            +    P     VHP       + + P  ++     L  +   +
Sbjct: 144 NYKNYLPLYFPIVHPSPRNNIWIKKNPWFEQEVVPELKEIISKI 187


>gi|319898186|ref|YP_004136383.1| uracil-DNA glycosylase [Haemophilus influenzae F3031]
 gi|317433692|emb|CBY82080.1| Predicted uracil-DNA glycosylase [Haemophilus influenzae F3031]
          Length = 191

 Score = 47.0 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/136 (13%), Positives = 39/136 (28%), Gaps = 10/136 (7%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + I+G  P      S   ++ K+G+ L + L           I  + P       
Sbjct: 33  PKTARINIVGQAPGLKAEQSRLYWNDKSGDRLREWLGVDYDYFYNSGIFAVLPMDFYYPG 92

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    R   M    L + ++ + IG   + ++   +       +  +   
Sbjct: 93  KGKSGDLPPRQGFAERWHPMILGHLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQF 152

Query: 220 CTPHSIIPTLATVHPQ 235
                    +  VHP 
Sbjct: 153 LPHF-----MPLVHPS 163


>gi|331002980|ref|ZP_08326492.1| hypothetical protein HMPREF0491_01354 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330413024|gb|EGG92399.1| hypothetical protein HMPREF0491_01354 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 196

 Score = 47.0 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 54/151 (35%), Gaps = 14/151 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            E   ++I+G  P      + K +  ++G+ L + +   +       I  I P       
Sbjct: 34  PESAKVIIVGQAPGIKAQEAKKYWFDRSGDRLREWMGVDKKTFYDSDIFAIIPMDFYYPG 93

Query: 165 NLSNIEMEICRPIIMR-----QIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSN 218
              + ++   +    +       EL + ++++ IG   + ++  N  +    + +  +  
Sbjct: 94  KGKSGDLPPRKDFASKWHPLLLKELPNVELIVLIGQYAQKYYLGNREKSNLTETVKAYKE 153

Query: 219 LCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248
               +     L  VHP    +  +  KKN W
Sbjct: 154 YLPRY-----LPLVHPSP--RNMMWMKKNPW 177


>gi|326693494|ref|ZP_08230499.1| Uracil-DNA glycosylase [Leuconostoc argentinum KCTC 3773]
          Length = 189

 Score = 47.0 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 54/168 (32%), Gaps = 14/168 (8%)

Query: 98  STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP 157
             I +       ++IIG  PS     SG  +   +G+ L + L   E       +  + P
Sbjct: 22  QPIFSA-PATAKIVIIGQAPSRKVQDSGIMWHDASGDRLREWLGVDETTFYDSGLFGVIP 80

Query: 158 WHPPGNRN-----LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN 212
                                 +       ++   ++++ IG   + ++ +   + T   
Sbjct: 81  MDFYFPGKGKSGDKPPRAGIAEKWHPRLLAQMPDVELMILIGAYAQRYYLDLSPKDTITA 140

Query: 213 LGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTWHALITLKKALK 259
             K       H +      VHP    +  +  KKN W  L  +  AL+
Sbjct: 141 TVK----NYAHYLPRYFPIVHPSP--RNNIWLKKNPWF-LQDVVAALQ 181


>gi|162448158|ref|YP_001621290.1| uracil-DNA glycosylase superfamily protein [Acholeplasma laidlawii
           PG-8A]
 gi|161986265|gb|ABX81914.1| uracil-DNA glycosylase superfamily protein [Acholeplasma laidlawii
           PG-8A]
          Length = 193

 Score = 47.0 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/165 (13%), Positives = 48/165 (29%), Gaps = 17/165 (10%)

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRN- 165
              ++IIG  P          +  ++G  L   L   E       +    P         
Sbjct: 33  SSKILIIGQAPGIKTQEKNLLWMDQSGKKLRSWLGVDEKTFYDNKLFGQMPMDFYFPGKS 92

Query: 166 ----LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221
                   +             + + K+++ IG  +++++   D  +      K  N   
Sbjct: 93  KSGDKPPRKDFASMWHPKLLSLMPNVKLIILIGQYSQSYYLGKDFNQNLTQTVKSYNQYL 152

Query: 222 PHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKNL 261
           P          HP       L + P  + +    L  L++ ++ +
Sbjct: 153 P----KYFPLPHPSPLNLFWLKKNPWFETDV---LPVLQQMIQEI 190


>gi|297154347|gb|ADI04059.1| hypothetical protein SBI_00938 [Streptomyces bingchenggensis BCW-1]
          Length = 226

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 48/151 (31%), Gaps = 36/151 (23%)

Query: 84  LRSFHDCHL------------------CSTSLSTICATQTEGQDLMIIGYTPSDS-DNIS 124
           +     C                           +     EG  L IIG  P+    N +
Sbjct: 1   MSGCRACPRLVRWREEAARIKRPAYREWDYWARPVPGFGPEGAGLAIIGLAPAAHGGNRT 60

Query: 125 GKPFSGKT-GNMLDKMLQSIEIMRTQI-------------HISMISPWHPPGNRNLSNIE 170
           G+ F+G   G+ L   L ++ +                   I+      PP     +  E
Sbjct: 61  GRMFTGDRAGDFLYAALYAVGLANQPEATHRGDGLELRGVRITAPVHCAPP-ANRPTTGE 119

Query: 171 MEICRPIIMRQIELISP--KILLFIGNKTKN 199
            + CRP +++++ L+ P  + ++ +G     
Sbjct: 120 RDTCRPWLVQELRLLRPTLRSVVVLGGFGWQ 150


>gi|120610552|ref|YP_970230.1| hypothetical protein Aave_1872 [Acidovorax citrulli AAC00-1]
 gi|120589016|gb|ABM32456.1| conserved hypothetical protein [Acidovorax citrulli AAC00-1]
          Length = 199

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 60/181 (33%), Gaps = 16/181 (8%)

Query: 78  HELKSLLRSFHDCHLCSTSL----STICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
            +L SL+ S  +C LC+ SL      +    + G  +++ G  P    + SG PF   +G
Sbjct: 6   PDLASLVHSVRNCTLCAGSLPLGPRPVL-QASAGARILVAGQAPGRKVHASGIPFDDASG 64

Query: 134 NMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--K 188
             L   +   +       +I I  +   +P   R+        C     + +    P  +
Sbjct: 65  ERLRAWMGVDRDTFYDPGRIAIVPMGFCYPGTGRSGDLPPRPECASTWRKPLLQALPGIR 124

Query: 189 ILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNT 247
           + + +G     +     A           +       +  L   HP    +     K++ 
Sbjct: 125 LTIVLGAHALAWH-GRRAPAPASLTDAVQDWRRDAPALWVLP--HPSP--RNNGWLKRHP 179

Query: 248 W 248
           W
Sbjct: 180 W 180


>gi|331698752|ref|YP_004334991.1| uracil-DNA glycosylase [Pseudonocardia dioxanivorans CB1190]
 gi|326953441|gb|AEA27138.1| Uracil-DNA glycosylase superfamily [Pseudonocardia dioxanivorans
           CB1190]
          Length = 209

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 47/168 (27%), Gaps = 19/168 (11%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
                +++IG  P      SG P++  +G  L + L   +       +  I P       
Sbjct: 40  HPQARIVLIGQAPGTRAQHSGIPWNDPSGVTLRRWLGVTDDEFYDPTLFAILPMDFYFPG 99

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSN 218
                          R       EL   ++ + IG   +  +            +  + +
Sbjct: 100 KGAHGDLPPRPDVAPRWHPRLLTELPHVRLTVLIGRYAQKHYLPGATGTTLTDTVRAFRD 159

Query: 219 LCTPHSIIPTLATVHPQEL-----IQYPLIKKNTWHALITLKKALKNL 261
                     +  VHP  L      + P        AL  L+  ++ +
Sbjct: 160 HLPDR-----MPLVHPSPLNFRWQTRNP---WFAEEALPALRARVQAV 199


>gi|239831484|ref|ZP_04679813.1| uracil-DNA glycosylase superfamily protein [Ochrobactrum
           intermedium LMG 3301]
 gi|239823751|gb|EEQ95319.1| uracil-DNA glycosylase superfamily protein [Ochrobactrum
           intermedium LMG 3301]
          Length = 216

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/147 (12%), Positives = 41/147 (27%), Gaps = 22/147 (14%)

Query: 105 TEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEI-------------MRTQ 149
                L+I+G  P     N +G+PF+G   G++L   L                      
Sbjct: 42  DTDVRLLIVGLAPGLRGANRTGRPFTGDYAGDLLYSTLSEFGFATGKFEARPDDSLRLLD 101

Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FFNNDA 206
             I       PP N+ + +      + +        + + ++ +G               
Sbjct: 102 ASIVNAVRCVPPENKPIGSEINNCRQFLSPMLTRFPNLQAVVTLGTIAHQSTVRALGAPV 161

Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVH 233
            +         +  +    +   ++ H
Sbjct: 162 ARHPFG----HDRASDIGTLRIFSSYH 184


>gi|319790830|ref|YP_004152470.1| uraciL-DNA glycosylase superfamily [Variovorax paradoxus EPS]
 gi|315593293|gb|ADU34359.1| uracil-DNA glycosylase superfamily [Variovorax paradoxus EPS]
          Length = 192

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 58/167 (34%), Gaps = 15/167 (8%)

Query: 77  LHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           +  L + +R    C  HL       +    +    L+++G  PS + + +G P++ K+G 
Sbjct: 1   MDALLTEIRDCRACAAHLPLGPRPVV--QTSATARLLLVGQAPSVTVHTTGVPWNDKSGE 58

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHP-PGNRNLSNIEMEICRPIIMRQIELIS-PKI 189
            L + L   + +    T++ +  +   +P  G         E       R +  +   ++
Sbjct: 59  QLRRWLGIDREVFYDATRVALMPMGFCYPGRGTSGDLPPRRECAELWQARLLAEMKQVEL 118

Query: 190 LLFIGNKTKNFFFN-NDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
            L IG   +  F          + +  ++           +   HP 
Sbjct: 119 TLLIGQYAQRHFLGAARKAGVTETVEAFAEY-----GPRFIPLPHPS 160


>gi|296447263|ref|ZP_06889192.1| conserved hypothetical protein [Methylosinus trichosporium OB3b]
 gi|296255225|gb|EFH02323.1| conserved hypothetical protein [Methylosinus trichosporium OB3b]
          Length = 210

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 62/202 (30%), Gaps = 31/202 (15%)

Query: 84  LRSFHDC-------HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
           + +   C        L       +    +    L+I G  P    + SG PF   +G+ L
Sbjct: 13  IGACRICAERPVGPPLPHAPRPVV--RVSPMARLLIAGQAPGMRVHRSGLPFDDPSGDRL 70

Query: 137 DKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIELISPKI 189
              +   ++     ++I ++ +S   P     G       E        +    L   + 
Sbjct: 71  RSWMGVDRATFYDVSRIGVAAMSFCFPGYDAHGGDLPPRRECAREWHDALF-AALPQVET 129

Query: 190 LLFIGNKTKNFFFNNDAQKTY------QNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI 243
           +L +G   + +      +           +G+W  L         +   HP    +    
Sbjct: 130 ILAVGKYAQAYHLRRLGRPVPAGASVAATVGRWRELF--DLEPRIVPLPHPSW--RNSGW 185

Query: 244 -KKNTW---HALITLKKALKNL 261
            K++ W    AL  L+  +  L
Sbjct: 186 LKRHPWFEAEALPALRAEVARL 207


>gi|323136673|ref|ZP_08071754.1| Uracil-DNA glycosylase superfamily [Methylocystis sp. ATCC 49242]
 gi|322397990|gb|EFY00511.1| Uracil-DNA glycosylase superfamily [Methylocystis sp. ATCC 49242]
          Length = 213

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 72/212 (33%), Gaps = 31/212 (14%)

Query: 74  ACSLHELKSLLRSFHDC-------HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126
           A  L E+ + +R+   C        L       +    +    L+I    P +  N +G 
Sbjct: 6   ARKLDEVVARIRACRFCVETPEGAPL-PHEPRPVL-RVSSSARLLIASQAPGNLVNQTGL 63

Query: 127 PFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSN-IEMEICRPIIMRQI 182
           PF+  +GN L + +   +      ++I I+ +    P  +    +      CR     ++
Sbjct: 64  PFNDPSGNRLREWMGVDRETFYNVSRIAIAPMGFCFPGNDAAGGDLPPRRECRARWHDEL 123

Query: 183 ELISPK--ILLFIGNKTKNFFFNNDAQKTYQNLG------KWSNLCTPHSIIPTLATVHP 234
               P+   +L IG   +++ F        +  G      +W +    ++        HP
Sbjct: 124 FAALPQIETVLAIGRYAQDYHFARLGHALPRGQGVSQIVARWRDF--QNARPLIFPLPHP 181

Query: 235 Q-----ELIQYPLIKKNTWHALITLKKALKNL 261
                  L + P  +      L  L+K +  L
Sbjct: 182 SWRNTGWLKRNPWFEAEV---LPVLRKEVARL 210


>gi|207723284|ref|YP_002253683.1| uracil-dna glycosylase protein [Ralstonia solanacearum MolK2]
 gi|206588482|emb|CAQ35445.1| uracil-dna glycosylase protein [Ralstonia solanacearum MolK2]
          Length = 178

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 43/136 (31%), Gaps = 6/136 (4%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ---SIEIMRTQIHISMISPWHPP 161
                ++I+G  P    + +G P++ ++G+ L + LQ          +I +  +    P 
Sbjct: 13  DRRARVLIVGQAPGRIVHETGIPWNDRSGDRLRQWLQIGYDDFYADKRIAVVPMGFCFPG 72

Query: 162 GNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
              +        C P   R +    P  K+ L +G   + ++F+                
Sbjct: 73  TGPSGDLPPRPECAPQWHRPLLTAMPELKLALLVGGYAQRYYFDV-PPGWSLTDVVRHGP 131

Query: 220 CTPHSIIPTLATVHPQ 235
                        HP 
Sbjct: 132 VRDAEGRVLFPLPHPS 147


>gi|312864746|ref|ZP_07724977.1| uracil-DNA glycosylase family protein [Streptococcus downei F0415]
 gi|311099873|gb|EFQ58086.1| uracil-DNA glycosylase family protein [Streptococcus downei F0415]
          Length = 194

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 45/164 (27%), Gaps = 14/164 (8%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + I+G  P      +   ++  +G+ L   L              + P       
Sbjct: 32  PKTARINIVGQAPGIKAQDTRLYWNDPSGDNLRDWLGIDRDTFYNSDKIAVIPMDFYYPG 91

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    +   +   EL    + L IGN  ++++    +     +  K    
Sbjct: 92  KGKSGDLPPRKGFAEKWHPLILQELPDISLTLLIGNYAQHYYLQQKSSVKLTDNVKAYKD 151

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258
             P         VHP         + P  K+     L  L K +
Sbjct: 152 FLPD----FFPLVHPSPRNNIWQKKNPWFKEEVLPDLKKLVKEI 191


>gi|332968003|gb|EGK07090.1| hypothetical protein HMPREF9374_3851 [Desmospora sp. 8437]
          Length = 67

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 4/64 (6%)

Query: 191 LFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
           + +GN    +FF +   +     G W  +      I T  + HP  + + P ++      
Sbjct: 1   MCLGNVAVQWFFLDPEAEVRALRGSWHTV----REIGTRVSYHPLAVRRRPNLRSRFLED 56

Query: 251 LITL 254
              L
Sbjct: 57  WRAL 60


>gi|171463624|ref|YP_001797737.1| hypothetical protein Pnec_0925 [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171193162|gb|ACB44123.1| conserved hypothetical protein [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 173

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 24/75 (32%), Gaps = 2/75 (2%)

Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI-IPTLATVHPQELIQYPLIKK 245
           P + +  G                Q       L   +   IP +A+    +++  P  K 
Sbjct: 99  PVVAMAFGGPAAQKITGERDPLP-QLRETVLALNIGNDEEIPVIASFELNQVLSRPKEKA 157

Query: 246 NTWHALITLKKALKN 260
             W  L+  +  L+N
Sbjct: 158 LLWQDLLLARSVLQN 172


>gi|325578790|ref|ZP_08148837.1| uracil DNA glycosylase [Haemophilus parainfluenzae ATCC 33392]
 gi|325159614|gb|EGC71746.1| uracil DNA glycosylase [Haemophilus parainfluenzae ATCC 33392]
          Length = 193

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/150 (13%), Positives = 46/150 (30%), Gaps = 13/150 (8%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
                + I+G  P      S   ++ K+G+ L + L           +  + P       
Sbjct: 32  PTTARINIVGQAPGVKAQESRLYWNDKSGDRLREWLGVDRDTFYHSGMFAVIPMDFYYPG 91

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    +  +     L + ++ + IG   + ++   +     + +  + + 
Sbjct: 92  KGKSGDLPPRKGFAEKWHVPILANLPNIELTILIGQYAQKYYLPENELNVTETVRHFRDF 151

Query: 220 CTPHSIIPTLATVHPQELIQYPLI-KKNTW 248
                    L  VHP    +  +  KKN W
Sbjct: 152 LPHF-----LPLVHPSP--RNQIWLKKNPW 174


>gi|218508557|ref|ZP_03506435.1| putative uracil DNA glycosylase protein [Rhizobium etli Brasil 5]
          Length = 77

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/77 (11%), Positives = 24/77 (31%), Gaps = 10/77 (12%)

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIK--- 244
           K+++ +G        +   +      GK   +           T HP  L++ P  +   
Sbjct: 1   KLIVAMGATALAALTDVKGRLQ-DVRGKAMAIE---GGRTLFVTAHPSYLLRIPDERLKA 56

Query: 245 ---KNTWHALITLKKAL 258
                    ++ ++  +
Sbjct: 57  EEMARFRQDMLEIQGLM 73


>gi|182678895|ref|YP_001833041.1| hypothetical protein Bind_1928 [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182634778|gb|ACB95552.1| conserved hypothetical protein [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 225

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 55/190 (28%), Gaps = 21/190 (11%)

Query: 78  HELKSLLRSFHDCHLCST--------SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129
            EL +   S   C LC                   +    L+I    P    + +G  F+
Sbjct: 18  DELAAYAASIRACTLCRDQPLKLPLPHPPRPVLRVSSTARLLIASQAPGVRVHQTGLSFN 77

Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNL---SNIEMEICRPIIMRQIE 183
             +G+ L   +   + I     +I I  +    P  +                       
Sbjct: 78  DASGDRLRGWMGVGRDIFYDEARIAIVPMGFCFPGHDAKKGDLPPRPECRQTWHDGLFGL 137

Query: 184 LISPKILLFIGNKTKNFFFNNDAQKTYQNLGK----WSNLCTPHSIIPTLATVHPQELIQ 239
           +   +++L IG   +++ F    +   +NL              +    +A  HP    +
Sbjct: 138 MPQIEMILAIGRYAQDYHFARLGRPLPKNLRVDDIIRRGAELSPASPRIVALPHPSW--R 195

Query: 240 YPLI-KKNTW 248
                K+N W
Sbjct: 196 NSGWLKRNPW 205


>gi|302387058|ref|YP_003822880.1| Uracil-DNA glycosylase superfamily [Clostridium saccharolyticum
           WM1]
 gi|302197686|gb|ADL05257.1| Uracil-DNA glycosylase superfamily [Clostridium saccharolyticum
           WM1]
          Length = 191

 Score = 46.3 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/162 (12%), Positives = 52/162 (32%), Gaps = 22/162 (13%)

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL 166
              + I+G  P      +   ++  +G+ L + L    + R   + +      P      
Sbjct: 33  DARIAIVGQAPGRKAEATQLFWNDLSGDRLREWL---GVSREIFYQTNRIAHLPMDFYYP 89

Query: 167 --------SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWS 217
                      +    +       E+ + +I++ IG+  + ++ N   QK+  + +  + 
Sbjct: 90  GKAKSGDAPPRKGFAEKWHPRLLDEMPNIEIIILIGSYAQKYYLNKKRQKSLTETVRNFQ 149

Query: 218 NLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITL 254
                +        VHP       L + P  + +    L  +
Sbjct: 150 KYLPEY-----FPLVHPSPLNLGWLSRNPWFENDVLPVLKEI 186


>gi|329769975|ref|ZP_08261372.1| hypothetical protein HMPREF0433_01136 [Gemella sanguinis M325]
 gi|328837535|gb|EGF87162.1| hypothetical protein HMPREF0433_01136 [Gemella sanguinis M325]
          Length = 195

 Score = 46.3 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/138 (10%), Positives = 42/138 (30%), Gaps = 9/138 (6%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
                ++IIG  P      S   F+ K+G  L + +   + +  +  +  + P       
Sbjct: 33  PSTAKILIIGQAPGIKAQESRIFFNDKSGVKLREWMGIDDDIFYKSGLIGVVPMDFYYPG 92

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    +        + + ++++ +G   ++++   + +         +  
Sbjct: 93  KGKSGDLPPRKNSAPKWHKKVLELMPNIELIILVGKYAQDYYLKENKKSNLTE----TVF 148

Query: 220 CTPHSIIPTLATVHPQEL 237
                       VHP  L
Sbjct: 149 HYEEYGPLYFPIVHPSPL 166


>gi|294339724|emb|CAZ88086.1| putative Uracil-DNA glycosylase [Thiomonas sp. 3As]
          Length = 227

 Score = 46.3 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 44/160 (27%), Gaps = 27/160 (16%)

Query: 99  TICATQTEGQDLMIIGYTPS-DSDNISGKPFSGK-TGNMLDKML---------------- 140
            +         L+I G  P     N SG+PF+G   G +L   L                
Sbjct: 42  PVPPLGPLDAPLLIAGLAPGLKGANASGRPFTGDGAGPLLFGTLTELGLASRPVPVRIGD 101

Query: 141 ------QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE-LISPKILLFI 193
                     +      IS      PP N      E+  C   I  +I  + + ++++ +
Sbjct: 102 HPSTLRADDGLQLHGCRISNAVKCLPPEN-KPLPAEIRTCNRFIAAEITAMTNLRVIVAL 160

Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
           G    +       QK                    + + H
Sbjct: 161 GKVAHDAVLMALGQKASSARFA-HAAEHRLGDYMLIDSYH 199


>gi|15902592|ref|NP_358142.1| hypothetical protein spr0548 [Streptococcus pneumoniae R6]
 gi|116517025|ref|YP_816044.1| hypothetical protein SPD_0543 [Streptococcus pneumoniae D39]
 gi|15458124|gb|AAK99352.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
 gi|116077601|gb|ABJ55321.1| conserved hypothetical protein [Streptococcus pneumoniae D39]
          Length = 192

 Score = 46.3 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 46/165 (27%), Gaps = 15/165 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159
            +   + IIG  P      +G  +  K+G+ L   L   +          +  +  +   
Sbjct: 32  PKTARINIIGQAPGLKTQEAGLYWKDKSGDRLRDWLGVDEDTFYNSGYFAVLPMDFYFPG 91

Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
              + +L        +       EL   ++ L IG   + ++             K    
Sbjct: 92  HGKSGDLPPRTGFAEKWHPQVLQELPDIQLTLLIGQYAQAYYLQEKISGKVTERVKHYKA 151

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKAL 258
             P         VHP       + + P  +      L   +K  L
Sbjct: 152 YLPAY----FPLVHPSPRNQIWMAKNPWFEAEVVPDLKKRIKTIL 192


>gi|218516758|ref|ZP_03513598.1| probable uracil-DNA glycosylase protein [Rhizobium etli 8C-3]
          Length = 166

 Score = 46.3 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 52/158 (32%), Gaps = 17/158 (10%)

Query: 77  LHELKSLLRSFHDC---HLCSTSLSTI-----CATQTEGQDLMIIGYTPSDSDNISGKPF 128
           L  L+  + +   C        +          A  +    ++I G  P    + SG PF
Sbjct: 7   LETLRREIAACRICRDAPAKGPAHRLPQEPRPVAVISSNARILIAGQAPGLRVHESGLPF 66

Query: 129 SGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSN-IEMEICRPIIMRQIEL 184
              +G+ L   L   ++    R +  I  +    P  +   ++      C P   +++  
Sbjct: 67  DDASGDRLRSWLGVDRASFYDRDRFAIVPMGFCFPGYDDKGADLPPRRECAPFWRQRVLS 126

Query: 185 ISPKI--LLFIGNKTKNFFFNNDAQKTY--QNLGKWSN 218
             P+I  +L IG   + +      Q        G W +
Sbjct: 127 AMPQIELVLVIGQYAQAWHMAGGGQGGMAETVRG-WRD 163


>gi|225858457|ref|YP_002739967.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae
           70585]
 gi|225721616|gb|ACO17470.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae
           70585]
          Length = 192

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 47/165 (28%), Gaps = 15/165 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159
            +   + IIG  P      +G  +  K+G+ L   L   +          +  +  +   
Sbjct: 32  PKTARINIIGQAPGLKTQEAGLYWKDKSGDRLRDWLGVDEDTFYNSGYFAVLPMDFYFPG 91

Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
              + +L        +  +    EL   ++ L IG   + ++             K    
Sbjct: 92  HGKSGDLPPRTGFAEKWHLQLLQELPDIQLTLLIGQYAQAYYLQEKISGKVTERVKHYKD 151

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKAL 258
             P         VHP       + + P  +      L   +K  L
Sbjct: 152 YLPAY----FPLVHPSPRNQIWMAKNPWFEAEVVPDLKKRIKTIL 192


>gi|331700508|ref|YP_004397467.1| uracil-DNA glycosylase [Lactobacillus buchneri NRRL B-30929]
 gi|329127851|gb|AEB72404.1| uracil-DNA glycosylase [Lactobacillus buchneri NRRL B-30929]
          Length = 195

 Score = 45.9 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 43/138 (31%), Gaps = 9/138 (6%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
               +++II   PS     S   +   +G+ L   +   +          + P       
Sbjct: 32  DPQAEILIISQAPSRKAQASMVFWDDPSGDRLRDWMGLNKTEFYHSGKIAVMPLDFYYPG 91

Query: 165 NLSNIEMEICRPIIMR-----QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
             ++ ++   +    +       ++ + K+ L IG   + ++  N  Q+      +    
Sbjct: 92  KGAHGDLPPRKGFAQKWHPPLLAQMPNIKLKLLIGQYAQKYYLGNRRQRNLTEKVRHFED 151

Query: 220 CTPHSIIPTLATVHPQEL 237
             P         VHP  L
Sbjct: 152 YLPDY----FPLVHPSPL 165


>gi|171779778|ref|ZP_02920734.1| hypothetical protein STRINF_01615 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281880|gb|EDT47314.1| hypothetical protein STRINF_01615 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 194

 Score = 45.9 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/168 (10%), Positives = 49/168 (29%), Gaps = 17/168 (10%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + I+G  P      SG  ++  +G+ L K L           +  + P       
Sbjct: 32  PKTARINIVGQAPGIRAQESGLYWNDPSGDNLRKWLGVDRETFYNSGLFAVVPMDYYFPG 91

Query: 165 NLSNIEME-----ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSN 218
              + ++        +          + ++ + +G+  + ++    +       +  + +
Sbjct: 92  KGKSGDLAPRKGFADKWHKRTLALAPNIELHILVGSYAQRYYLKQKSSAKLTDTVKHYKD 151

Query: 219 LCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKALKN 260
                        VHP         + P  ++     L   +K  L+ 
Sbjct: 152 YLPEF-----FPLVHPSPRNNIWQRKNPWFEEEVIPDLQKRVKAILEK 194


>gi|227889481|ref|ZP_04007286.1| uracil DNA glycosylase superfamily protein [Lactobacillus johnsonii
           ATCC 33200]
 gi|227849959|gb|EEJ60045.1| uracil DNA glycosylase superfamily protein [Lactobacillus johnsonii
           ATCC 33200]
          Length = 195

 Score = 45.9 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/158 (13%), Positives = 45/158 (28%), Gaps = 18/158 (11%)

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGN 163
              + IIG  P        K +   +G+ L   L   + +      I I  +  ++P   
Sbjct: 35  SARINIIGQAPGRIAQEKMKFWDDPSGDRLRTWLGVSRDVFYNSGMIAILPMDFYYPGKG 94

Query: 164 RNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNF--FFNNDAQKTYQNLGKWSNL 219
           ++      +        Q+  + P  ++ + +G              + T     K+   
Sbjct: 95  KSGDLPPRKGFAQNWHPQLLKLMPDIQLTILVGAYATRSYLHLGYKDRLTDIVR-KYQQY 153

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALI 252
              +        VHP         + P  ++     L 
Sbjct: 154 LPDY-----FPIVHPSPRNKIWEAKNPWFEEQVIPDLQ 186


>gi|169838776|ref|ZP_02871964.1| hypothetical protein cdivTM_16991 [candidate division TM7
           single-cell isolate TM7a]
          Length = 51

 Score = 45.9 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 22/50 (44%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGK 126
            ++LK  +     C L  T ++ I     E   ++ +  + S+ ++I  +
Sbjct: 2   WNDLKLEIDICTKCILERTRINPIVGEGNEKAQVLFVLDSVSEEEDIKQQ 51


>gi|270640648|ref|ZP_06222119.1| uracil-DNA glycosylase [Haemophilus influenzae HK1212]
 gi|270317352|gb|EFA28886.1| uracil-DNA glycosylase [Haemophilus influenzae HK1212]
          Length = 145

 Score = 45.9 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/129 (13%), Positives = 36/129 (27%), Gaps = 10/129 (7%)

Query: 112 IIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL----- 166
           I+G  P      S   ++ K+G  L + L           +  + P              
Sbjct: 2   IVGQAPGLKAEQSRLYWNDKSGERLREWLGVDYDYFYNSGMFSVLPMDFYYPGKGKSGDL 61

Query: 167 SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII 226
              +    R   M    L + ++ + IG   + ++   +       +  +          
Sbjct: 62  PPRQGFAERWHSMILGHLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQFLPHF--- 118

Query: 227 PTLATVHPQ 235
             +  VHP 
Sbjct: 119 --MPLVHPS 125


>gi|153009966|ref|YP_001371181.1| uracil-DNA glycosylase superfamily protein [Ochrobactrum anthropi
           ATCC 49188]
 gi|151561854|gb|ABS15352.1| Uracil-DNA glycosylase superfamily [Ochrobactrum anthropi ATCC
           49188]
          Length = 216

 Score = 45.9 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/147 (12%), Positives = 42/147 (28%), Gaps = 22/147 (14%)

Query: 105 TEGQDLMIIGYTPSDSD-NISGKPFSGKT-GNMLDKMLQSIEI-------------MRTQ 149
            +   L+I+G  P     N +G+PF+G   G++L   L                      
Sbjct: 42  DDDVRLLIVGLAPGLRGANRTGRPFTGDYAGDLLYSTLCEFGFATGKFEARPDDSLRLLD 101

Query: 150 IHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---FFNNDA 206
             I       PP N+ +        + ++       + + ++ +G               
Sbjct: 102 ASIVNAVRCVPPENKPIGAEINNCRQFLLPMLTRFRNLQAIVTLGTIAHQSTVRALGAPV 161

Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVH 233
            +         +  +    +   ++ H
Sbjct: 162 ARHPFG----HDRASDIGSLRIFSSYH 184


>gi|322411293|gb|EFY02201.1| hypothetical protein SDD27957_02585 [Streptococcus dysgalactiae
           subsp. dysgalactiae ATCC 27957]
          Length = 191

 Score = 45.9 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/163 (13%), Positives = 49/163 (30%), Gaps = 18/163 (11%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   ++I+G  P      +   ++ ++G  L   L           +  I P       
Sbjct: 29  PKTARIIIVGQAPGIVAQETKLYWNDRSGIRLRDWLGVDNDTFYHSGLFGIIPMDFYYPG 88

Query: 165 NLSNIEMEICRPI---IMRQIELISPKI--LLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
              + ++             +  + P++   + +G   ++F+  N A KT     +    
Sbjct: 89  KGKSGDLPPRNGFAAKWHPPLRELMPEVELTILVGRYAQDFYLGNKAYKTLTETVRHFAD 148

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKA 257
             P         VHP       L + P         L+ + + 
Sbjct: 149 YLPDY----FPLVHPSPRNQLWLAKNPW----FEQDLLPILQK 183


>gi|284165374|ref|YP_003403653.1| hypothetical protein Htur_2097 [Haloterrigena turkmenica DSM 5511]
 gi|284015029|gb|ADB60980.1| hypothetical protein Htur_2097 [Haloterrigena turkmenica DSM 5511]
          Length = 210

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/167 (11%), Positives = 48/167 (28%), Gaps = 24/167 (14%)

Query: 97  LSTICATQTEGQDLMIIGYTPSDSDNI-SGKPFSG-KTGNMLDKMLQSIEI--------M 146
            + +        D  +IG  P       +G PF+G ++G  + ++ +++           
Sbjct: 26  RTAVFGYGDANADFHLIGDHPDVHGGRSTGVPFTGTESGVAIQEVARAVGFADGPFDRPD 85

Query: 147 RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206
              ++ S I     P     S+            ++  I+  ILL +G +  +       
Sbjct: 86  LENLYCSYIHMCCLPAGETPSDESYADLERFFDAELRAINAHILLPVGERATDHVLREYT 145

Query: 207 QKTYQN---LGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA 250
            + ++    +               +         + P      W  
Sbjct: 146 TQRHRIDLDMAALHATEIRGRGFLIVPI-------REPTE----WED 181


>gi|322372885|ref|ZP_08047421.1| uracil DNA glycosylase family protein [Streptococcus sp. C150]
 gi|321277927|gb|EFX54996.1| uracil DNA glycosylase family protein [Streptococcus sp. C150]
          Length = 194

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/199 (12%), Positives = 59/199 (29%), Gaps = 32/199 (16%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQ--------DLMIIGYTPSDSDNISGK 126
            +L EL   + +           + +   Q             + I+G  P      SG 
Sbjct: 2   ETLEELTQAIMA--------DEQNKVYTEQGIKPLFTIPKTARINIVGQAPGIRAQESGL 53

Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISP--WHPPGNRNL---SNIEMEICRPIIMRQ 181
            ++  +G+ L   +        +  +  I P  ++ PG+         +    +      
Sbjct: 54  YWNDPSGDNLRDWMGVSREEFYESGMFAIVPMDFYFPGHGKSGDLPPRKGFADKWHKRVL 113

Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQ----- 235
               + ++ + +GN  + ++ +  +       +  + +    +     L  VHP      
Sbjct: 114 ALAPNIQLTILVGNYAQRYYLHQKSSAKLTDTVKHYKDYLPDY-----LPLVHPSPRNNI 168

Query: 236 ELIQYPLIKKNTWHALITL 254
              + P   +     L  L
Sbjct: 169 WQAKNPWFMEEVVPDLKAL 187


>gi|306831211|ref|ZP_07464372.1| uracil DNA glycosylase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304426777|gb|EFM29888.1| uracil DNA glycosylase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 194

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/166 (12%), Positives = 47/166 (28%), Gaps = 15/166 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + I+G  P      SG  ++  +G+ L K L     +     +  + P       
Sbjct: 32  PKTARINIVGQAPGIRAQESGLYWNDPSGDNLRKWLGVDREIFYDSGLFAVVPMDYYFPG 91

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    +          + ++ + +G+  + ++    +  T     K    
Sbjct: 92  TGKSGDLPPRKGFAEKWHKRTLAFAPNIELHILVGSYAQRYYLQQKSSATLTETVKHYRA 151

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKALK 259
             P         VHP         +     K     L   +K+ L+
Sbjct: 152 YLPE----FFPLVHPSPRNNLWQARNLWFAKEVIPDLQKRVKEILE 193


>gi|111114835|ref|YP_709453.1| hypothetical protein BAPKO_0012 [Borrelia afzelii PKo]
 gi|216263757|ref|ZP_03435751.1| conserved hypothetical protein [Borrelia afzelii ACA-1]
 gi|110890109|gb|ABH01277.1| hypothetical protein BAPKO_0012 [Borrelia afzelii PKo]
 gi|215979801|gb|EEC20623.1| conserved hypothetical protein [Borrelia afzelii ACA-1]
          Length = 199

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 7/79 (8%)

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
           +I   +PK +L    +  +FF N   +           +      IP + T  P   I+ 
Sbjct: 126 EINNKNPKAILSC--EEIDFFLNQPLRIQI-----VRGIELRFKGIPLVFTYLPTNQIKN 178

Query: 241 PLIKKNTWHALITLKKALK 259
           P +KK  W  L  +K  +K
Sbjct: 179 PELKKEIWQDLKIIKGIIK 197


>gi|239502679|ref|ZP_04661989.1| putative DNA polymerase III alpha chain [Acinetobacter baumannii
           AB900]
          Length = 421

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/150 (13%), Positives = 57/150 (38%), Gaps = 2/150 (1%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTIC-ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             L   +R    C+ C  +          +    M++   P+  +   GK   G++   +
Sbjct: 242 ASLVEHMRDCKQCNGCDLAGQVHPDIRLGKKMRFMVVSDCPTWEEEKKGKLLEGESAQYV 301

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
              ++  E+     + + +       ++ L+  ++  C P + ++IEL+ P +++ +G++
Sbjct: 302 KAAIKENELAVADGYYTTLVK-AKKQDKFLTTGQINGCSPHLAKEIELLKPPVIVALGSQ 360

Query: 197 TKNFFFNNDAQKTYQNLGKWSNLCTPHSII 226
           +  +   +        +G         + I
Sbjct: 361 SIRYLLPDVKVSPSDLVGMTFYNPKLDATI 390


>gi|327470897|gb|EGF16353.1| uracil DNA glycosylase [Streptococcus sanguinis SK330]
          Length = 194

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 49/167 (29%), Gaps = 20/167 (11%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + I+G  P      +G  +  K+G+ L + L   E M        + P       
Sbjct: 32  PKNARINIVGQAPGLKTQEAGLYWKDKSGDRLREWLGVDEEMFYNSGYFAVLPMDFYFPG 91

Query: 165 NLSNIEMEICRPIIMRQIELISP--------KILLFIGNKTKNFFFNNDAQKTYQNLGKW 216
           +  + ++   +    +      P        ++ + IG   + ++ +           + 
Sbjct: 92  HGKSGDLPPRKDFADK---WHQPILELLPDIELTILIGQYAQKYYLHQKGNIKLTETVQH 148

Query: 217 SNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258
                P         VHP       + + P  +      L  L + +
Sbjct: 149 YQDYLPD----FFPLVHPSPRNQIWMAKNPWFEAEVVPDLQALVQKI 191


>gi|332523813|ref|ZP_08400065.1| uracil-DNA glycosylase family protein [Streptococcus porcinus str.
           Jelinkova 176]
 gi|332315077|gb|EGJ28062.1| uracil-DNA glycosylase family protein [Streptococcus porcinus str.
           Jelinkova 176]
          Length = 190

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 58/167 (34%), Gaps = 17/167 (10%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPP 161
            +   ++I+G  P      +   ++ ++G  L + L   +       +  I  +  ++P 
Sbjct: 29  PKNAKIVIVGQAPGIVAQETKLFWNDRSGLKLRQWLGVDEETFYHSGKFAILPMDFYYPG 88

Query: 162 GNR--NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
             +  +L   +    +        L + ++++ +G   + ++     ++      K    
Sbjct: 89  KGKGGDLPPRKYFAQKWHQPLLDLLPNVELVILVGQYAQAYYLGKTKKENLTETVKAYQD 148

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKNL 261
             P         VHP       L + P  ++     +  L++ + NL
Sbjct: 149 YLP----RFFPLVHPSPRNQLWLKRNPWFEEEV---VPVLQEKVANL 188


>gi|309972656|gb|ADO95857.1| Conserved hypothetical protein [Haemophilus influenzae R2846]
          Length = 195

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/164 (12%), Positives = 46/164 (28%), Gaps = 15/164 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + I+G  P      S   ++ K+G  L + L           +  + P       
Sbjct: 33  PKTARINIVGQAPGLKAEQSRLYWNDKSGERLREWLGVDYDYFYNSGMFSVLPMDFYYPG 92

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    R   M    L + ++ + IG   + ++   +       +  +   
Sbjct: 93  KGKSGDLPPRQGFAERWHPMILGHLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQF 152

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258
                    +  VHP       + + P   +     L  L K +
Sbjct: 153 LPHF-----IPLVHPSPRNQLWITKNPWFGEQIIPELQILVKQI 191


>gi|296135585|ref|YP_003642827.1| Uracil-DNA glycosylase superfamily [Thiomonas intermedia K12]
 gi|295795707|gb|ADG30497.1| Uracil-DNA glycosylase superfamily [Thiomonas intermedia K12]
          Length = 227

 Score = 45.5 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 44/160 (27%), Gaps = 27/160 (16%)

Query: 99  TICATQTEGQDLMIIGYTPS-DSDNISGKPFSGK-TGNMLDKML---------------- 140
            +         L+I G  P     N SG+PF+G   G +L   L                
Sbjct: 42  PVPPLGPLDAPLLIAGLAPGLKGANASGRPFTGDGAGPLLFGTLTELGLASRPVPVRIGD 101

Query: 141 ------QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE-LISPKILLFI 193
                     +      IS      PP N      E+  C   I  +I  + + ++++ +
Sbjct: 102 HPSTLRADDGLQLHGCRISNAVKCLPPEN-KPLPAEIRTCNRFIAAEITAMPNLRVIVAL 160

Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVH 233
           G    +       +K                    + + H
Sbjct: 161 GKVAHDAVLMALGRKASSARFA-HAAEHRLGDYMLIDSYH 199


>gi|298528005|ref|ZP_07015409.1| DNA-directed DNA polymerase [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298511657|gb|EFI35559.1| DNA-directed DNA polymerase [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 914

 Score = 45.5 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/148 (12%), Positives = 44/148 (29%), Gaps = 12/148 (8%)

Query: 87  FHDCHLCSTSLSTICATQTEGQ--DLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIE 144
             +C               +    D++++G  P   D   G   + +   +LD++ +   
Sbjct: 4   CDEC-RHKGQTR---YNGKDRGELDILVVGDAPGKVDCRRGHYTASQYLAVLDQIRRLKP 59

Query: 145 IMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN 204
                   ++          ++   ++  C P +   +    PK LL +G      F   
Sbjct: 60  SYTVGQEFALGCK----PEDSVKAQDISHCSPRLHEIVSRTKPKALLLLGVNAARAF--G 113

Query: 205 DAQKTYQNLGKWSNLCTPHSIIPTLATV 232
             +      G    L      +  +A+ 
Sbjct: 114 INKNQLAIRGNIIELNVEGHPVKAVASY 141


>gi|315612736|ref|ZP_07887647.1| uracil DNA glycosylase [Streptococcus sanguinis ATCC 49296]
 gi|315314846|gb|EFU62887.1| uracil DNA glycosylase [Streptococcus sanguinis ATCC 49296]
          Length = 205

 Score = 45.5 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 50/168 (29%), Gaps = 17/168 (10%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159
            +   + I+G  P      +G  +  K+G+ L   L   +          +  +  +   
Sbjct: 41  PKTARINIVGQAPGLKTQEAGIYWKDKSGDRLRDWLGVDEDTFYNSGYFAVLPMDFYFPG 100

Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL-GKWSN 218
              + +L        +       E  + ++ L IG   + ++          +   ++ +
Sbjct: 101 HGKSGDLPPRTDFAEKWHPQLLKECPNIELTLLIGQYAQAYYLQEKISGKVTDRVHRFKD 160

Query: 219 LCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALI-TLKKALKN 260
               +        VHP       + + P  +      L   ++K L  
Sbjct: 161 YLPDY-----FPLVHPSPRNQIWMAKNPWFESEVVPDLKNRIQKILGE 203


>gi|224534872|ref|ZP_03675441.1| conserved hypothetical protein [Borrelia spielmanii A14S]
 gi|224513812|gb|EEF84137.1| conserved hypothetical protein [Borrelia spielmanii A14S]
          Length = 203

 Score = 45.5 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 7/79 (8%)

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
           +I   +PK +L    +  +FF N   +           +      IP + T  P   I+ 
Sbjct: 130 EISNKNPKAILSC--EEIDFFLNQPLRIQI-----VRGIELRFKGIPLVLTYLPTNQIKN 182

Query: 241 PLIKKNTWHALITLKKALK 259
           P +KK  W  L  +K  +K
Sbjct: 183 PELKKEIWQDLKIIKGIIK 201


>gi|307243670|ref|ZP_07525810.1| uracil DNA glycosylase family protein [Peptostreptococcus stomatis
           DSM 17678]
 gi|306492879|gb|EFM64892.1| uracil DNA glycosylase family protein [Peptostreptococcus stomatis
           DSM 17678]
          Length = 191

 Score = 45.5 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 46/137 (33%), Gaps = 8/137 (5%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNML--DKMLQSIEIMRTQIHISMISPWHPPG 162
            +   ++I+G  P      S  PF+ K+G  L     +        +I I  +  ++P  
Sbjct: 31  DKEARILIVGQAPGKKVEESLIPFNDKSGETLISWMGIDKDTFYSKEIAIVPMDFYYPGK 90

Query: 163 NRNL--SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220
            +       +            EL + ++ + IG  + +++     +K      +  +  
Sbjct: 91  AKTGDLPPRKFIAQEYHGPILKELNNIELTILIGKYSMDYYLKGRTKKNLTETVRCFDEY 150

Query: 221 TPHSIIPTLATVHPQEL 237
            P         VHP  L
Sbjct: 151 LP----KYFPIVHPSPL 163


>gi|320546577|ref|ZP_08040892.1| uracil DNA glycosylase [Streptococcus equinus ATCC 9812]
 gi|320448962|gb|EFW89690.1| uracil DNA glycosylase [Streptococcus equinus ATCC 9812]
          Length = 194

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/168 (10%), Positives = 53/168 (31%), Gaps = 17/168 (10%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + I+G  P      SG  ++  +G+ L + L     +  +  +  + P       
Sbjct: 32  PKTARINIVGQAPGIRAQESGLYWNDPSGDNLRRWLGVDREIFYESGLFAVVPMDFYFPG 91

Query: 165 NLSNIEME-----ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSN 218
              + ++        +          + ++ + +G+  + ++    +     + +  + +
Sbjct: 92  KGKSGDLAPRKGFADKWHKRTLDLAPNIELHILVGSYAQRYYLQQKSSAKLTETVKHYKD 151

Query: 219 LCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKALKN 260
                        VHP         + P  ++     L   +++ LK 
Sbjct: 152 YLPEF-----FPVVHPSPRNNIWQRKNPWFEQEVIPDLQKRVREILKK 194


>gi|91790977|ref|YP_551928.1| uracil-DNA glycosylase superfamily protein [Polaromonas sp. JS666]
 gi|91700857|gb|ABE47030.1| Uracil-DNA glycosylase superfamily [Polaromonas sp. JS666]
          Length = 194

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 57/176 (32%), Gaps = 20/176 (11%)

Query: 80  LKSLLRSFHDC-HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDK 138
           L + + S  +C          +         ++II   P    + SG P+  ++G  L +
Sbjct: 8   LHAEISSCTNCAPNLPLGPRPVVQFG-RTARILIISQAPGTKVHASGIPWDDQSGARLRE 66

Query: 139 MLQ---SIEIMRTQIHISMISPWHP-PGNRNLSNIEMEICRPIIMRQIELISP-KILLFI 193
            L           ++ I  +   +P  G         E       R +  + P ++ L +
Sbjct: 67  WLGISPQDFYNPEKVAIMPMGFCYPGKGKSGDLPPRPECAPLWHDRILAQLPPDRLTLLV 126

Query: 194 GNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-ELIQYPLIKKNTW 248
           G+  + ++    A +                 +   A+  P   L+ +P  +  +W
Sbjct: 127 GSYAQAYYLPQTAHRLLT------------DKVEAFASFLPAFFLLPHPSWRCVSW 170


>gi|320096247|ref|ZP_08027831.1| uracil-DNA glycosylase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319976828|gb|EFW08587.1| uracil-DNA glycosylase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 217

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/153 (11%), Positives = 48/153 (31%), Gaps = 14/153 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
           +    ++++G  P      + KP++  +G +L + L   +       +  + P       
Sbjct: 42  SAESRIVLVGQAPGRIAQRTRKPWNDPSGRLLRQWLGVTDQQFYDPALFALMPMDFYFPG 101

Query: 165 NLSNIEME-----ICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
             ++ +                  +   ++ + +G   + ++    A +T       +N 
Sbjct: 102 KGTHGDQPPRKDFAPTWHPRLLALMPRVRLTILVGAYAQRYYLGAAAGRTLTE--TVANA 159

Query: 220 CTPHSIIPTLATVHPQEL-----IQYPLIKKNT 247
                       VHP  L      + P  ++ T
Sbjct: 160 ADAPEGF--FPLVHPSPLNIAWRKRNPWFEQET 190


>gi|239813142|ref|YP_002942052.1| uracil-DNA glycosylase superfamily [Variovorax paradoxus S110]
 gi|239799719|gb|ACS16786.1| Uracil-DNA glycosylase superfamily [Variovorax paradoxus S110]
          Length = 192

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 64/195 (32%), Gaps = 19/195 (9%)

Query: 77  LHELKSLLRSFHDCH--LCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           +  L + +R    C   L       + A  +    L+I+G  PS + + +G P+  K+G 
Sbjct: 1   MDALLAEIRGCTACAAQLPLGPRPVVQA--SASARLLIVGQAPSLTVHATGLPWDDKSGE 58

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHP--PGNRNLSNIEMEICRPIIMRQIELISPKI 189
            L + L   + +     +I I  +   +P    + +L                ++   ++
Sbjct: 59  QLRRWLGIEREVFYDAARIAIMPMGYCYPGRGSSGDLPPRRECAELWHARLLAQMSRVEL 118

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248
            L IG   +  F     +         +           +   HP    +     K + W
Sbjct: 119 TLLIGQYAQRHFLGAARKAGVTE----TVAAFAEFAPRFIPLPHPSP--RNTGWFKHHPW 172

Query: 249 ---HALITLKKALKN 260
                L  L++ ++ 
Sbjct: 173 FESEVLPVLRERVRQ 187


>gi|227499818|ref|ZP_03929913.1| uracil-DNA glycosylase [Anaerococcus tetradius ATCC 35098]
 gi|227218122|gb|EEI83390.1| uracil-DNA glycosylase [Anaerococcus tetradius ATCC 35098]
          Length = 190

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 46/139 (33%), Gaps = 12/139 (8%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   L+IIG  P      +G  F  K+G  L   L  I++ R       I P       
Sbjct: 31  HKQSKLLIIGQAPGLKVEQTGILFDDKSGERLVDWL-GIDMKRLHGPEISILPMDFYYPG 89

Query: 165 NLSNIEMEICRPIIMRQIE------LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSN 218
                + +  R  I R+        L + K+ + IG  ++ F+     +K      +   
Sbjct: 90  KGKAGD-KAPRRFIAREYHPYLLDELNNIKLTILIGAYSQRFYLKEKFKKNLTETVRAYK 148

Query: 219 LCTPHSIIPTLATVHPQEL 237
              P         VHP  L
Sbjct: 149 QYLPEY----FPIVHPSSL 163


>gi|322387284|ref|ZP_08060894.1| uracil DNA glycosylase [Streptococcus infantis ATCC 700779]
 gi|321141813|gb|EFX37308.1| uracil DNA glycosylase [Streptococcus infantis ATCC 700779]
          Length = 201

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 53/168 (31%), Gaps = 17/168 (10%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159
            +   + IIG  P      +G  +  K+G+ L + L   +          +  +  +   
Sbjct: 37  PKTARINIIGQAPGLKTQEAGLYWKDKSGDRLREWLGVDEDTFYNSGYFAVMPMDFYFPG 96

Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL-GKWSN 218
              + +L        +       EL   ++ L IG   + ++ +        +   ++ +
Sbjct: 97  HGKSGDLPPRPGFAEKWHPKLLKELPDIQLTLLIGQYAQAYYLHEKVSGKVTDRVHRFKD 156

Query: 219 LCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKALKN 260
               +        VHP       + + P  + +    L   ++K L  
Sbjct: 157 YLPDY-----FPLVHPSPRNQIWMKKNPWFEADVLPDLKERIQKILGE 199


>gi|225376150|ref|ZP_03753371.1| hypothetical protein ROSEINA2194_01787 [Roseburia inulinivorans DSM
           16841]
 gi|225211977|gb|EEG94331.1| hypothetical protein ROSEINA2194_01787 [Roseburia inulinivorans DSM
           16841]
          Length = 182

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 58/165 (35%), Gaps = 17/165 (10%)

Query: 82  SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS--GKTGNMLDKM 139
             +R    C LC      +     +   +  +G +    ++    P S    TG ++ K+
Sbjct: 3   EQIRRCQKCGLCFNQKPLL--DTEKECHVFWVGLSAKKMESDEEVPLSPETNTGMLIQKI 60

Query: 140 LQSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
            +         + + +    P       R  +  E++ C   ++ +I+++SPKI+  +G 
Sbjct: 61  EELCG--EVITYKTNLVKCLPLTEEQKLRYPNRKEIDSCFEHLVGEIQVMSPKIVFLLG- 117

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHS---IIPTLATVHPQEL 237
                 +++  +    N  KW      +        +   HP  +
Sbjct: 118 ---EKVYSSVGKHLKINFEKWDEFEYHYKKYEGTYYVPIHHPSYI 159


>gi|301793812|emb|CBW36204.1| uracil DNA glycosylase superfamily protein [Streptococcus
           pneumoniae INV104]
 gi|332204644|gb|EGJ18709.1| hypothetical protein SPAR120_0609 [Streptococcus pneumoniae
           GA47901]
          Length = 192

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 47/165 (28%), Gaps = 15/165 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + IIG  P      +G  +  K+G+ L   L   E          + P       
Sbjct: 32  PKTARINIIGQAPGLKTQEAGLYWKDKSGDRLRDWLGVDEDTFYNSGYFAVLPMDFYFPG 91

Query: 165 NLSNIEMEICRPI---IMRQIELISP--KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
           +  + ++  C         Q+    P  ++ L IG   + ++             K    
Sbjct: 92  HGKSGDLPPCTGFAEKWHPQLLQELPDIQLTLLIGQYAQAYYLQEKISGKVTERVKHYKD 151

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKAL 258
             P         VHP       + + P  +      L   +K  L
Sbjct: 152 YLPAY----FPLVHPSPRNQIWMAKNPWFEAEVVPDLKKRIKTIL 192


>gi|296327705|ref|ZP_06870246.1| uracil-DNA glycosylase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296155191|gb|EFG95967.1| uracil-DNA glycosylase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 197

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 48/149 (32%), Gaps = 10/149 (6%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP--WHPPG 162
            +   ++I+G  P      +   +  K+G+ L       E      ++  I P  ++ PG
Sbjct: 35  PKEARIVIVGQAPGIKAQENRLYWKDKSGDKLRVWTGINEKTFYSSNLLAIIPMDFYYPG 94

Query: 163 NRNLSNIEMEICRPIIMRQIE---LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                ++                 L + ++ + +G   + F+     +    N  K    
Sbjct: 95  KGKSGDLPPRKDFGDKWHHKILELLPNVELFILVGKYAQEFYLKGKIKDNLTNTVKAYKE 154

Query: 220 CTPHSIIPTLATVHPQELIQYPLIKKNTW 248
             P         VHP   +    +KKN W
Sbjct: 155 YLP----KFFPIVHPSP-LNIGWLKKNLW 178


>gi|19704594|ref|NP_604156.1| Uracil-DNA glycosylase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|19714888|gb|AAL95455.1| hypothetical protein FN1259 [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
          Length = 197

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 48/149 (32%), Gaps = 10/149 (6%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP--WHPPG 162
            +   ++I+G  P      +   +  K+G+ L       E      ++  I P  ++ PG
Sbjct: 35  PKEARIVIVGQAPGIKAQENRLYWKDKSGDKLRVWTGINEKTFYSSNLLAIIPMDFYYPG 94

Query: 163 NRNLSNIEMEICRPIIMRQIE---LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                ++                 L + ++ + +G   + F+     +    N  K    
Sbjct: 95  KGKSGDLPPRKDFGDKWHHKILELLPNVELFILVGKYAQEFYLKGKIKDNLTNTVKAYKE 154

Query: 220 CTPHSIIPTLATVHPQELIQYPLIKKNTW 248
             P         VHP   +    +KKN W
Sbjct: 155 YLP----KFFPIVHPSP-LNIGWLKKNLW 178


>gi|315634857|ref|ZP_07890139.1| uracil-DNA glycosylase [Aggregatibacter segnis ATCC 33393]
 gi|315476409|gb|EFU67159.1| uracil-DNA glycosylase [Aggregatibacter segnis ATCC 33393]
          Length = 193

 Score = 45.1 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/147 (10%), Positives = 42/147 (28%), Gaps = 15/147 (10%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
                + I+G  P      +   ++ ++G+ L + L     +     +  + P       
Sbjct: 32  PTTARINIVGQAPGTKAEQTRLYWNDQSGDRLREWLGVDREVFYHSGLFAVIPMDFYYPG 91

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    +       +L   ++ + IG   + ++   +     + +  +   
Sbjct: 92  KGKSGDLPPRKGFAEKWHSQILADLPHIELTILIGQYAQKYYLPQNKLNVTETVKNYRIF 151

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYP 241
                    L  VHP       L + P
Sbjct: 152 LPHF-----LPLVHPSPRNQLWLAKNP 173


>gi|229823131|ref|ZP_04449200.1| hypothetical protein GCWU000282_00428 [Catonella morbi ATCC 51271]
 gi|229787297|gb|EEP23411.1| hypothetical protein GCWU000282_00428 [Catonella morbi ATCC 51271]
          Length = 194

 Score = 45.1 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 59/165 (35%), Gaps = 16/165 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   L+I+G  P  +   +G+P+  ++G+ L + L           +  I P       
Sbjct: 33  PKAARLVIVGQAPGLATQEAGRPWDDRSGDRLREWLGMNRSTFYDSDLLAILPMDFYYPG 92

Query: 165 NLSNIEMEICRPI---IMRQIELISP--KILLFIGNKTKNFFF-NNDAQKTYQNLGKWSN 218
              + ++   +        QI    P  ++ L +G   ++++   +      + +  + +
Sbjct: 93  KGKSGDLPPRKGFAAKWHPQILAQLPEVRLTLLVGRYAQDYYLAKSKRSNLTETVAHYQD 152

Query: 219 LCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258
               +        VHP       L Q+P  ++     L  L +A+
Sbjct: 153 YLPDY-----FPLVHPSPLNQRWLKQHPWFEQEVVPDLQKLVQAI 192


>gi|15900532|ref|NP_345136.1| hypothetical protein SP_0624 [Streptococcus pneumoniae TIGR4]
 gi|111657228|ref|ZP_01407999.1| hypothetical protein SpneT_02001561 [Streptococcus pneumoniae
           TIGR4]
 gi|149005734|ref|ZP_01829473.1| hypothetical protein CGSSp18BS74_09215 [Streptococcus pneumoniae
           SP18-BS74]
 gi|168482856|ref|ZP_02707808.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae
           CDC1873-00]
 gi|168490488|ref|ZP_02714631.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae
           CDC0288-04]
 gi|303260116|ref|ZP_07346089.1| hypothetical protein CGSSp9vBS293_01510 [Streptococcus pneumoniae
           SP-BS293]
 gi|303261300|ref|ZP_07347248.1| hypothetical protein CGSSp14BS292_08175 [Streptococcus pneumoniae
           SP14-BS292]
 gi|303263965|ref|ZP_07349886.1| hypothetical protein CGSSpBS397_05142 [Streptococcus pneumoniae
           BS397]
 gi|303265955|ref|ZP_07351851.1| hypothetical protein CGSSpBS457_00800 [Streptococcus pneumoniae
           BS457]
 gi|303268338|ref|ZP_07354135.1| hypothetical protein CGSSpBS458_02419 [Streptococcus pneumoniae
           BS458]
 gi|307126821|ref|YP_003878852.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae
           670-6B]
 gi|14972100|gb|AAK74776.1| conserved hypothetical protein [Streptococcus pneumoniae TIGR4]
 gi|147762674|gb|EDK69634.1| hypothetical protein CGSSp18BS74_09215 [Streptococcus pneumoniae
           SP18-BS74]
 gi|172043622|gb|EDT51668.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae
           CDC1873-00]
 gi|183574956|gb|EDT95484.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae
           CDC0288-04]
 gi|302637434|gb|EFL67921.1| hypothetical protein CGSSp14BS292_08175 [Streptococcus pneumoniae
           SP14-BS292]
 gi|302638811|gb|EFL69273.1| hypothetical protein CGSSpBS293_01510 [Streptococcus pneumoniae
           SP-BS293]
 gi|302642176|gb|EFL72526.1| hypothetical protein CGSSpBS458_02419 [Streptococcus pneumoniae
           BS458]
 gi|302644539|gb|EFL74790.1| hypothetical protein CGSSpBS457_00800 [Streptococcus pneumoniae
           BS457]
 gi|302646370|gb|EFL76596.1| hypothetical protein CGSSpBS397_05142 [Streptococcus pneumoniae
           BS397]
 gi|306483883|gb|ADM90752.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae
           670-6B]
 gi|332077051|gb|EGI87513.1| hypothetical protein SPAR148_0584 [Streptococcus pneumoniae
           GA17545]
 gi|332203780|gb|EGJ17847.1| hypothetical protein SPAR93_0651 [Streptococcus pneumoniae GA47368]
          Length = 192

 Score = 45.1 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 46/165 (27%), Gaps = 15/165 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159
            +   + IIG  P      +G  +  K+G+ L   L   +          +  +  +   
Sbjct: 32  PKTARINIIGQAPGLKTQEAGLYWKDKSGDRLRDWLGVDEDTFYNSGYFAVLPMDFYFPG 91

Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
              + +L        +       EL   ++ L IG   + ++             K    
Sbjct: 92  HGKSGDLPPRTGFAEKWHPQVLQELPDIQLTLLIGQYAQAYYLQEKISGKVTERVKHYKD 151

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKAL 258
             P         VHP       + + P  +      L   +K  L
Sbjct: 152 YLPAY----FPLVHPSPRNQIWMAKNPWFEAEVVPDLKKRIKTIL 192


>gi|291006475|ref|ZP_06564448.1| putative DNA polymerase related protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 83

 Score = 45.1 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 33/83 (39%), Gaps = 10/83 (12%)

Query: 184 LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP----TLATVHPQELIQ 239
           ++ P+I++ +G         +D  +  +  G   +      + P     LAT HP  +++
Sbjct: 1   MVRPEIVVCLGATAAQALMGSDF-RISKERGVLLDFPEIAGVEPRPASLLATTHPSAVVR 59

Query: 240 YPLIKKNTWH----ALITLKKAL 258
            P  ++  +      L  +  AL
Sbjct: 60  APD-RREAYRGLLSDLEVVAAAL 81


>gi|322374738|ref|ZP_08049252.1| uracil DNA glycosylase family protein [Streptococcus sp. C300]
 gi|321280238|gb|EFX57277.1| uracil DNA glycosylase family protein [Streptococcus sp. C300]
          Length = 196

 Score = 45.1 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/167 (13%), Positives = 50/167 (29%), Gaps = 15/167 (8%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159
            +   + I+G  P      +G  +  K+GN L + L   +          +  +  +   
Sbjct: 32  PKTARINIVGQAPGLKTQEAGIYWKDKSGNRLREWLGVDEDTFYNSGYFAVLPMDFYFPG 91

Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
              + +L   +    +       E  + ++ L IG   + ++ +           K    
Sbjct: 92  HGKSGDLPPRKGFAEKWHPQLLKECPNIELTLLIGQYAQAYYLHEKVSGKVTERVKHY-- 149

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKALKN 260
                +      VHP       + + P  +      L   ++K L  
Sbjct: 150 --KDHLPEYFPLVHPSPRNQIWMAKNPWFESEVVPDLKKRIQKILGE 194


>gi|295426504|ref|ZP_06819154.1| uracil DNA glycosylase [Lactobacillus amylolyticus DSM 11664]
 gi|295063872|gb|EFG54830.1| uracil DNA glycosylase [Lactobacillus amylolyticus DSM 11664]
          Length = 195

 Score = 45.1 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/158 (12%), Positives = 45/158 (28%), Gaps = 18/158 (11%)

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGN 163
              + IIG  P        K +   +G+ L   L   + +      I I  +  ++P   
Sbjct: 35  SARINIIGQAPGRIAQEKMKFWDDPSGDRLRIWLGVSRDVFYNSGMIAILPMDFYYPGKG 94

Query: 164 RNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNF--FFNNDAQKTYQNLGKWSNL 219
           ++      +        Q+  + P  ++ + +G              + T      +   
Sbjct: 95  KSGDLPPRKGFAQNWHPQLLKLMPDIQLTILVGAYATRSYLHLGYKDRLTDIVR-NYQQY 153

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALI 252
              +       +VHP         + P  ++     L 
Sbjct: 154 LPDY-----FPSVHPSPRNKIWEAKNPWFEEQVIPDLQ 186


>gi|227544308|ref|ZP_03974357.1| uracil DNA glycosylase superfamily protein [Lactobacillus reuteri
           CF48-3A]
 gi|300909498|ref|ZP_07126959.1| uracil DNA glycosylase [Lactobacillus reuteri SD2112]
 gi|227185716|gb|EEI65787.1| uracil DNA glycosylase superfamily protein [Lactobacillus reuteri
           CF48-3A]
 gi|300893363|gb|EFK86722.1| uracil DNA glycosylase [Lactobacillus reuteri SD2112]
          Length = 195

 Score = 45.1 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/158 (12%), Positives = 44/158 (27%), Gaps = 18/158 (11%)

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGN 163
              + IIG  P        K +   +G+ L   L   + +      I I  +  ++P   
Sbjct: 35  SARINIIGQAPGRIAQEKMKFWDDPSGDRLRTWLGVSRDVFYNSGMIAILPMDFYYPGKG 94

Query: 164 RNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNF--FFNNDAQKTYQNLGKWSNL 219
           ++      +        Q+  + P  ++ + +G              + T      +   
Sbjct: 95  KSGDLPPRKGFAQNWHPQLLKLMPDIQLTILVGAYATRSYLHLGYKDRLTDIVR-NYQQY 153

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALI 252
              +        VHP         + P  ++     L 
Sbjct: 154 LPDY-----FPIVHPSPRNKIWEAKNPWFEEQVIPDLQ 186


>gi|148984004|ref|ZP_01817323.1| hypothetical protein CGSSp3BS71_07719 [Streptococcus pneumoniae
           SP3-BS71]
 gi|147924151|gb|EDK75263.1| hypothetical protein CGSSp3BS71_07719 [Streptococcus pneumoniae
           SP3-BS71]
 gi|301799668|emb|CBW32228.1| uracil DNA glycosylase superfamily protein [Streptococcus
           pneumoniae OXC141]
          Length = 194

 Score = 45.1 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/159 (13%), Positives = 43/159 (27%), Gaps = 14/159 (8%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159
            +   + IIG  P      +G  +  K+G+ L   L   +          +  +  +   
Sbjct: 32  PKTARINIIGQAPGLKTQEAGLYWKDKSGDRLRDWLGVDEDTFYNSGYFAVLPMDFYFPG 91

Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
              + +L        +       EL   ++ L IG   + ++             K    
Sbjct: 92  HGKSGDLPPRTGFAEKWHPQLLQELPDIQLTLLIGQYAQAYYLQEKISGKVTERVKHYKD 151

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT 253
             P         VHP       + + P  +      L  
Sbjct: 152 YLPAY----FPLVHPSPRNQIWMAKNPWFEAEVVPDLKK 186


>gi|148988990|ref|ZP_01820390.1| hypothetical protein CGSSp6BS73_02415 [Streptococcus pneumoniae
           SP6-BS73]
 gi|148992269|ref|ZP_01821992.1| 50S ribosomal protein L11 [Streptococcus pneumoniae SP9-BS68]
 gi|149010758|ref|ZP_01832129.1| 50S ribosomal protein L11 [Streptococcus pneumoniae SP19-BS75]
 gi|149021584|ref|ZP_01835639.1| hypothetical protein CGSSp23BS72_06949 [Streptococcus pneumoniae
           SP23-BS72]
 gi|168488308|ref|ZP_02712507.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae
           SP195]
 gi|168492784|ref|ZP_02716927.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae
           CDC3059-06]
 gi|169833041|ref|YP_001694101.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae
           Hungary19A-6]
 gi|182683555|ref|YP_001835302.1| hypothetical protein SPCG_0585 [Streptococcus pneumoniae CGSP14]
 gi|194398008|ref|YP_002037282.1| hypothetical protein SPG_0567 [Streptococcus pneumoniae G54]
 gi|221231446|ref|YP_002510598.1| uracil DNA glycosylase superfamily protein [Streptococcus
           pneumoniae ATCC 700669]
 gi|225854154|ref|YP_002735666.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae
           JJA]
 gi|225856322|ref|YP_002737833.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae
           P1031]
 gi|225860620|ref|YP_002742129.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|237649865|ref|ZP_04524117.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae
           CCRI 1974]
 gi|237821271|ref|ZP_04597116.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae
           CCRI 1974M2]
 gi|298229350|ref|ZP_06963031.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae
           str. Canada MDR_19F]
 gi|298255484|ref|ZP_06979070.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae
           str. Canada MDR_19A]
 gi|298502416|ref|YP_003724356.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae
           TCH8431/19A]
 gi|303253948|ref|ZP_07340069.1| uracil DNA glycosylase superfamily protein [Streptococcus
           pneumoniae BS455]
 gi|147765239|gb|EDK72168.1| 50S ribosomal protein L11 [Streptococcus pneumoniae SP19-BS75]
 gi|147925487|gb|EDK76564.1| hypothetical protein CGSSp6BS73_02415 [Streptococcus pneumoniae
           SP6-BS73]
 gi|147928895|gb|EDK79907.1| 50S ribosomal protein L11 [Streptococcus pneumoniae SP9-BS68]
 gi|147930280|gb|EDK81265.1| hypothetical protein CGSSp23BS72_06949 [Streptococcus pneumoniae
           SP23-BS72]
 gi|168995543|gb|ACA36155.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae
           Hungary19A-6]
 gi|182628889|gb|ACB89837.1| hypothetical protein SPCG_0585 [Streptococcus pneumoniae CGSP14]
 gi|183572915|gb|EDT93443.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae
           SP195]
 gi|183576922|gb|EDT97450.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae
           CDC3059-06]
 gi|194357675|gb|ACF56123.1| conserved hypothetical protein [Streptococcus pneumoniae G54]
 gi|220673906|emb|CAR68412.1| uracil DNA glycosylase superfamily protein [Streptococcus
           pneumoniae ATCC 700669]
 gi|225722389|gb|ACO18242.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae
           JJA]
 gi|225726275|gb|ACO22127.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae
           P1031]
 gi|225726739|gb|ACO22590.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298238011|gb|ADI69142.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae
           TCH8431/19A]
 gi|301801491|emb|CBW34183.1| uracil DNA glycosylase superfamily protein [Streptococcus
           pneumoniae INV200]
 gi|302599124|gb|EFL66149.1| uracil DNA glycosylase superfamily protein [Streptococcus
           pneumoniae BS455]
 gi|327390357|gb|EGE88698.1| hypothetical protein SPAR5_0599 [Streptococcus pneumoniae GA04375]
 gi|332076457|gb|EGI86920.1| hypothetical protein SPAR68_0644 [Streptococcus pneumoniae GA41301]
 gi|332202499|gb|EGJ16568.1| hypothetical protein SPAR69_0610 [Streptococcus pneumoniae GA41317]
          Length = 192

 Score = 45.1 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 46/165 (27%), Gaps = 15/165 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159
            +   + IIG  P      +G  +  K+G+ L   L   +          +  +  +   
Sbjct: 32  PKTARINIIGQAPGLKTQEAGLYWKDKSGDRLRDWLGVDEDTFYNSGYFAVLPMDFYFPG 91

Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
              + +L        +       EL   ++ L IG   + ++             K    
Sbjct: 92  HGKSGDLPPRTGFAEKWHPQLLQELPDIQLTLLIGQYAQAYYLQEKISGKVTERVKHYKD 151

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKAL 258
             P         VHP       + + P  +      L   +K  L
Sbjct: 152 YLPAY----FPLVHPSPRNQIWMAKNPWFEAEVVPDLKKRIKTIL 192


>gi|325690628|gb|EGD32631.1| uracil DNA glycosylase [Streptococcus sanguinis SK115]
          Length = 194

 Score = 44.7 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 23/197 (11%), Positives = 60/197 (30%), Gaps = 22/197 (11%)

Query: 76  SLHEL-KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           +L ++ K+++    +       +  + A   +   + I+G  P      +G  +  K+G+
Sbjct: 3   TLDDITKAIMADPENKEFTKQGIKPLFAA-PKNARINIVGQAPGLKTQEAGLYWKDKSGD 61

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP------- 187
            L + L   E          + P       +  + ++   +    +      P       
Sbjct: 62  RLREWLDVDEDTFYNSGYFAVLPMDFYFPGHGKSGDLPPRKDFADK---WHQPILELLPD 118

Query: 188 -KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYP 241
            ++ + IG   + ++ +           +      P         VHP       + + P
Sbjct: 119 IELTILIGQYAQKYYLHQTGNIKLTETVQHYQDYLPD----FFPLVHPSPRNQIWIAKNP 174

Query: 242 LIKKNTWHALITLKKAL 258
              +     L  L + +
Sbjct: 175 WFAEQVVPDLQALVQKI 191


>gi|261415155|ref|YP_003248838.1| hypothetical protein Fisuc_0746 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261371611|gb|ACX74356.1| hypothetical protein Fisuc_0746 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302326286|gb|ADL25487.1| hypothetical protein FSU_1184 [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 308

 Score = 44.7 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 34/244 (13%), Positives = 73/244 (29%), Gaps = 61/244 (25%)

Query: 8   SQEQILTIALFYADSGV-YWVFDEP------------NNEATYESQRKEKSIDSAIQPIT 54
              ++        D G    + DEP                     + ++  + A  P  
Sbjct: 6   DFSELRKYLQGQMDMGEEDLLLDEPWTLTRKKSAAPAPVRPANPMPQMQRPANPAPFPQH 65

Query: 55  NIRHIHSPLVQQADSIAQKACSLH------------------------------------ 78
           +     +P+ QQ+   +    +                                      
Sbjct: 66  SAPANPAPIPQQSPFQSPAQSAFQQPSFGAPAQPAPSPHPAPAPKLDAGLTIAPRAVKKT 125

Query: 79  ----ELKSLLRSFHDC----HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130
               EL   + +F+D      L + + + +     E   L+I+   P          F  
Sbjct: 126 TAAYELADSIVAFYDALKTDPLYARATNVVRYEGPEHPRLLILLAAP-KPGETGNNFFQS 184

Query: 131 KTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKIL 190
            TG ML ++  S+  +   + ++          R LS I +   R ++ +++  I+P+I+
Sbjct: 185 PTGEMLVRLFGSLGYVPDSLGVTYFYK---DAPRALSPILLASLRRMLTKELSFIAPEIM 241

Query: 191 LFIG 194
           +  G
Sbjct: 242 MTFG 245


>gi|227530281|ref|ZP_03960330.1| uracil DNA glycosylase superfamily protein [Lactobacillus vaginalis
           ATCC 49540]
 gi|227349804|gb|EEJ40095.1| uracil DNA glycosylase superfamily protein [Lactobacillus vaginalis
           ATCC 49540]
          Length = 195

 Score = 44.7 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/157 (12%), Positives = 47/157 (29%), Gaps = 16/157 (10%)

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHP--P 161
              + IIG  P        K +   +G+ L   L   + +      I I  +  ++P   
Sbjct: 35  SARINIIGQAPGRIAQEKMKFWDDPSGDRLRAWLGVSRDVFYNSGMIAILPMDFYYPGKG 94

Query: 162 GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLC 220
           G+ +L   +    +        + + ++ + +G      + +   +      +  +    
Sbjct: 95  GSSDLPPRKDFAPKWHPQLLKLMPNIQLTILVGAYATRRYLHLRYKDRLTDVVRNYRQYL 154

Query: 221 TPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALI 252
             +        VHP         + P  K+     L 
Sbjct: 155 PDY-----FPIVHPSPRNQVWESKNPWFKQKVIPDLQ 186


>gi|58336872|ref|YP_193457.1| hypothetical protein LBA0545 [Lactobacillus acidophilus NCFM]
 gi|227903431|ref|ZP_04021236.1| uracil DNA glycosylase superfamily protein [Lactobacillus
           acidophilus ATCC 4796]
 gi|58254189|gb|AAV42426.1| hypothetical protein LBA0545 [Lactobacillus acidophilus NCFM]
 gi|227868751|gb|EEJ76172.1| uracil DNA glycosylase superfamily protein [Lactobacillus
           acidophilus ATCC 4796]
          Length = 195

 Score = 44.7 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/158 (12%), Positives = 44/158 (27%), Gaps = 18/158 (11%)

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGN 163
              + IIG  P        K +   +G+ L   L   + +      I I  +  ++P   
Sbjct: 35  SARINIIGQAPGRIAQEKMKFWDDPSGDRLRTWLGVSRDVFYNSGMIAILPMDFYYPGKG 94

Query: 164 RNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNF--FFNNDAQKTYQNLGKWSNL 219
           ++      +        Q+  + P  ++ + +G              + T      +   
Sbjct: 95  KSGDLPPRKGFAQNWHPQLLKLMPDIQLTILVGAYATRSYLHLGYKDRLTDIVR-NYQQY 153

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALI 252
              +        VHP         + P  ++     L 
Sbjct: 154 LPDY-----FPIVHPSPRNKIWEAKNPWFEEQVIPDLQ 186


>gi|302335999|ref|YP_003801206.1| Uracil-DNA glycosylase superfamily [Olsenella uli DSM 7084]
 gi|301319839|gb|ADK68326.1| Uracil-DNA glycosylase superfamily [Olsenella uli DSM 7084]
          Length = 209

 Score = 44.7 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 18/166 (10%), Positives = 49/166 (29%), Gaps = 15/166 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
           +    ++IIG  P      +  P++ ++G+ L + L              I P       
Sbjct: 45  SASARIVIIGQAPGRVAQDTRVPWNDRSGDRLREWLGMDRDTFYDPSKVAIIPMDFYFPG 104

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    +   +    +   ++ + +G+   + +    +  +  ++ +    
Sbjct: 105 TGKSGDLPPRKGFAEKWHPILLQMMPQVELTVLVGSYAVHHYLGLKSSISLTSVVQDYRS 164

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKALK 259
             P         VHP       +   P   +     L   + + L+
Sbjct: 165 YLPAR----FPLVHPSPRNQIWMRNNPWFAEEVLPDLRATVARILR 206


>gi|134100722|ref|YP_001106383.1| putative DNA polymerase related protein [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133913345|emb|CAM03458.1| putative DNA polymerase related protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 82

 Score = 44.7 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 32/82 (39%), Gaps = 10/82 (12%)

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP----TLATVHPQELIQY 240
           + P+I++ +G         +D  +  +  G   +      + P     LAT HP  +++ 
Sbjct: 1   MRPEIVVCLGATAAQALMGSDF-RISKERGVLLDFPEIAGVEPRPASLLATTHPSAVVRA 59

Query: 241 PLIKKNTWH----ALITLKKAL 258
           P  ++  +      L  +  AL
Sbjct: 60  PD-RREAYRGLLSDLEVVAAAL 80


>gi|152983063|ref|YP_001352670.1| uracil-DNA glycosylase [Janthinobacterium sp. Marseille]
 gi|151283140|gb|ABR91550.1| uracil-DNA glycosylase [Janthinobacterium sp. Marseille]
          Length = 194

 Score = 44.7 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 55/174 (31%), Gaps = 18/174 (10%)

Query: 80  LKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
           L + + +  +C  +L       +    +    ++II   P    + SG P+  ++G  L 
Sbjct: 8   LHAEIAACTNCAPNLPLGPRPVV--QFSRTARILIISQAPGTKVHASGIPWDDQSGARLR 65

Query: 138 KMLQ---SIEIMRTQIHISMISPWHP-PGNRNLSNIEMEICRPIIMRQIELISPKIL-LF 192
           + L           ++ I  +   +P  G         E       + +  + P  L L 
Sbjct: 66  EWLGISPQDFYNPEKVAIMPMGFCYPGKGKSGDLPPRPECAPLWHDKILAQLPPDHLTLL 125

Query: 193 IGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHP-----QELIQYP 241
           +G+  +  +    A +   +  +      P          HP       + + P
Sbjct: 126 VGSYAQARYLPPTAPRLQTDRVEAFASFLPA----FFPLPHPSWRCVSWMTRNP 175


>gi|307710663|ref|ZP_07647096.1| uracil DNA glycosylase superfamily protein [Streptococcus mitis
           SK564]
 gi|307618606|gb|EFN97749.1| uracil DNA glycosylase superfamily protein [Streptococcus mitis
           SK564]
          Length = 196

 Score = 44.7 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 46/167 (27%), Gaps = 15/167 (8%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159
            +   + IIG  P      +G  +  K+G+ L   L   +          +  +  +   
Sbjct: 32  PKTARINIIGQAPGLKTQKAGLYWKDKSGDRLRNWLGVDEDTFYDSGYFAVLPMDFYFPG 91

Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
              + +L        +       EL   ++ L IG   + ++             K    
Sbjct: 92  HGKSGDLPPRAGFAEKWHPQLLQELPDIQLTLLIGQYAQTYYLKEKISGKVTERVKHYQN 151

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKALKN 260
             P         VHP       + + P  +      L   +K  L  
Sbjct: 152 YLPTY----FPLVHPSPRNQIWMAKNPWFEAEVVPDLKKRIKTILGE 194


>gi|149002306|ref|ZP_01827248.1| hypothetical protein CGSSp14BS69_01654 [Streptococcus pneumoniae
           SP14-BS69]
 gi|147759621|gb|EDK66612.1| hypothetical protein CGSSp14BS69_01654 [Streptococcus pneumoniae
           SP14-BS69]
 gi|332074427|gb|EGI84903.1| hypothetical protein SPAR50_0608 [Streptococcus pneumoniae GA17570]
          Length = 194

 Score = 44.7 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 22/159 (13%), Positives = 43/159 (27%), Gaps = 14/159 (8%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159
            +   + IIG  P      +G  +  K+G+ L   L   +          +  +  +   
Sbjct: 32  PKTARINIIGQAPGLKTQEAGLYWKDKSGDRLRDWLGVDEDTFYNSGYFAVLPMDFYFPG 91

Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
              + +L        +       EL   ++ L IG   + ++             K    
Sbjct: 92  HGKSGDLPPRTGFAEKWHPQLLQELPDIQLTLLIGQYAQAYYLQEKISGKVTERVKHYKD 151

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT 253
             P         VHP       + + P  +      L  
Sbjct: 152 YLPAY----FPLVHPSPRNQIWMAKNPWFEAEVVPDLKK 186


>gi|269468887|gb|EEZ80479.1| hypothetical protein Sup05_1041 [uncultured SUP05 cluster
           bacterium]
          Length = 139

 Score = 44.7 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALK 259
           T HP E++    +K+  W  L  LK+ LK
Sbjct: 111 TYHPSEILVNEQLKREAWEVLKNLKQCLK 139


>gi|256826497|ref|YP_003150456.1| uracil-DNA glycosylase [Cryptobacterium curtum DSM 15641]
 gi|256582640|gb|ACU93774.1| uracil-DNA glycosylase [Cryptobacterium curtum DSM 15641]
          Length = 200

 Score = 44.7 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 22/165 (13%), Positives = 55/165 (33%), Gaps = 17/165 (10%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHP- 160
                ++I+G  P      +   ++ ++G+ L   L   +       ++ I  +  + P 
Sbjct: 38  HAEARIVIVGQAPGRIAQDTHMVWNDRSGDRLRDWLGIDRETFYTSDKLAIMPMDFYFPG 97

Query: 161 -PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSN 218
              + +L   +    +        +   ++ + +GN   + + +  +       +  +  
Sbjct: 98  TGKSGDLPPRKGFADKWHPALLALMPHVELTVLVGNYATHAYLHLKSSAKLTDIVHNYQR 157

Query: 219 LCTPHSIIPTLATVHPQELIQYPLI-KKNTW---HALITLKKALK 259
                     L  VHP    +  +  KKN W     L  L+K + 
Sbjct: 158 YLPER-----LPLVHPSP--RNQIWMKKNPWFGAEVLPELQKRVA 195


>gi|157374660|ref|YP_001473260.1| phage SPO1 DNA polymerase domain-containing protein [Shewanella
           sediminis HAW-EB3]
 gi|157317034|gb|ABV36132.1| phage SPO1 DNA polymerase domain protein [Shewanella sediminis
           HAW-EB3]
          Length = 214

 Score = 44.7 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 50/197 (25%), Gaps = 35/197 (17%)

Query: 78  HELKSLLRSFHDCHLCSTSLSTIC---ATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
             L +L+     C LC   L          +    ++I G  P    +  G PF   +G+
Sbjct: 7   DTLDALINQISACQLCRAELPYPPKPIIQVSADAKILIAGQAPGQKAHEQGLPFKDVSGD 66

Query: 135 MLDKMLQSIEIMRTQIHISMISPW---------HPPGNRNLSNIEMEICRPIIMRQIEL- 184
            L   L          ++  I P                          +      +   
Sbjct: 67  RLRSWLGVTSSQFYDPNLFAILPMGFCFPGNIIRNGKKAGDKPPIPLCAKSWRQAILSHL 126

Query: 185 ISPKILLFIGNKTKNFFFNNDAQKTYQNL------------GKWSNLCTPHSIIPTLATV 232
              ++ + +G    ++  +ND   + +                W            +   
Sbjct: 127 DKVELTVILGQYAIDYHLDNDTPDSDKCSKKSSKISVTSAVASWKQYWPSQ-----IVLP 181

Query: 233 HPQ-----ELIQYPLIK 244
           HP       L ++P  +
Sbjct: 182 HPSPRNNIWLKRHPEFE 198


>gi|326792102|ref|YP_004309923.1| uracil-DNA glycosylase superfamily [Clostridium lentocellum DSM
           5427]
 gi|326542866|gb|ADZ84725.1| Uracil-DNA glycosylase superfamily [Clostridium lentocellum DSM
           5427]
          Length = 193

 Score = 44.7 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 22/162 (13%), Positives = 61/162 (37%), Gaps = 11/162 (6%)

Query: 82  SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS--GKTGNMLDKM 139
             ++    C+L           + E  D+M +G +     +  G P +    TG ++ ++
Sbjct: 3   KQIKQCQKCNLYQN--QPPLIEECEACDVMWVGLSAKKITDNKGMPLAPSTNTGKIIAEI 60

Query: 140 LQSIEIMRTQIHISMISPWHPPGNR----NLSNIEMEICRPIIMRQIELISPKILLFIGN 195
            ++I     + + + +    P  +          E+ +C   ++ +I+ + PK++  +G 
Sbjct: 61  EETIG--LDKSYKTNLVKCAPLDDNSKLRYPKKEEVGVCIENLIVEIKYLQPKVIFLLGT 118

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237
           + K            +++ ++  +      I  +   HP  +
Sbjct: 119 QVKEAIEQYYEINFPKSV-EYDFISLSIDNIKFVPIQHPSYI 159


>gi|125718099|ref|YP_001035232.1| Uracil-DNA glycosylase [Streptococcus sanguinis SK36]
 gi|323351478|ref|ZP_08087132.1| uracil DNA glycosylase [Streptococcus sanguinis VMC66]
 gi|125498016|gb|ABN44682.1| Uracil-DNA glycosylase, putative [Streptococcus sanguinis SK36]
 gi|322121964|gb|EFX93690.1| uracil DNA glycosylase [Streptococcus sanguinis VMC66]
 gi|325687560|gb|EGD29581.1| uracil DNA glycosylase [Streptococcus sanguinis SK72]
 gi|332361107|gb|EGJ38911.1| uracil DNA glycosylase [Streptococcus sanguinis SK1056]
          Length = 194

 Score = 44.7 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 20/164 (12%), Positives = 50/164 (30%), Gaps = 14/164 (8%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + I+G  P      +G  +  K+G+ L + L   E M        + P       
Sbjct: 32  PKNARINIVGQAPGLKTQEAGLYWKDKSGDRLREWLSVDEEMFYNSGYFAVLPMDFYFPG 91

Query: 165 NLSNIEMEICRPIIMR-QIELISP----KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
           +  + ++   +    +    ++      ++ + IG   + ++ +           +    
Sbjct: 92  HGKSGDLPPRKDFADKWHQPILKLLPDIELTILIGQYAQKYYLHQKGNIKLTETVQHYQD 151

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258
             P         VHP       + + P   +     L  L + +
Sbjct: 152 YLPD----FFPLVHPSPRNQIWMAKNPWFAEQVVPDLQALVQKI 191


>gi|224531855|ref|ZP_03672487.1| conserved hypothetical protein [Borrelia valaisiana VS116]
 gi|224511320|gb|EEF81726.1| conserved hypothetical protein [Borrelia valaisiana VS116]
          Length = 200

 Score = 44.7 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 18/44 (40%)

Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
              +      IP + T  P   I+ P +KK  W  L  +K  +K
Sbjct: 155 VRGIELRFKGIPLVFTYLPTNQIKNPELKKEIWQDLKIIKGIIK 198


>gi|51598276|ref|YP_072464.1| hypothetical protein BG0013 [Borrelia garinii PBi]
 gi|51572847|gb|AAU06872.1| hypothetical protein BG0013 [Borrelia garinii PBi]
          Length = 196

 Score = 44.7 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 18/44 (40%)

Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
              +      IP + T  P   I+ P +KK  W  L  +K  +K
Sbjct: 151 VRGIELRFKGIPLVFTYLPTNQIKNPELKKEIWQDLKIIKGIIK 194


>gi|195978548|ref|YP_002123792.1| uracil-DNA glycosylase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195975253|gb|ACG62779.1| uracil-DNA glycosylase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 191

 Score = 44.7 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 20/166 (12%), Positives = 53/166 (31%), Gaps = 15/166 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   ++I+G  P      +   ++ ++G  L   L   +    Q  +  + P       
Sbjct: 29  PQTARIVIVGQAPGIVAQETRLYWNDRSGVRLRAWLGVDDRTFYQSGLFGVLPMDFYYPG 88

Query: 165 NLSNIEMEICRPIIMR-----QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
              + ++   +    +        +   ++++ +G   + ++     +       +    
Sbjct: 89  KGKSGDLPPRKGFAAKWHGPLMALMPQVELVVLVGQYAQQYYLGKGCRCNLTETVQHFED 148

Query: 220 CTPHSIIPTLATVHPQELIQYPLI-KKNTW--HALI-TLKKALKNL 261
             P         VHP    +  L   KN W    L+  LK  ++ +
Sbjct: 149 YLPDY----FPLVHPSP--RNQLWLAKNAWFEEELVPVLKDKVRQI 188


>gi|324992803|gb|EGC24723.1| uracil DNA glycosylase [Streptococcus sanguinis SK405]
 gi|327460240|gb|EGF06577.1| uracil DNA glycosylase [Streptococcus sanguinis SK1057]
          Length = 194

 Score = 44.4 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 49/167 (29%), Gaps = 20/167 (11%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + I+G  P      +G  +  K+G+ L + L   E +        + P       
Sbjct: 32  PKNARINIVGQAPGLKTQQAGLYWKDKSGDRLREWLGVDEEIFYHSGYFAVLPMDFYFPG 91

Query: 165 NLSNIEMEICRPIIMRQIELISP--------KILLFIGNKTKNFFFNNDAQKTYQNLGKW 216
           +  + ++   +    R      P        ++ + IG   + ++ +           + 
Sbjct: 92  HGKSGDLPPRKGFAER---WHQPILELLPDIELTILIGQYAQKYYLHQKGNIKLTETVQH 148

Query: 217 SNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258
                P         VHP       + + P   +     L  L + +
Sbjct: 149 YQDYLPD----FFPLVHPSPRNQIWMAKNPWFAEQVVPDLQALVQKI 191


>gi|168485735|ref|ZP_02710243.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae
           CDC1087-00]
 gi|183571207|gb|EDT91735.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae
           CDC1087-00]
          Length = 192

 Score = 44.4 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 46/165 (27%), Gaps = 15/165 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159
            +   + IIG  P      +G  +  K+G+ L   L   +          +  +  +   
Sbjct: 32  PKTARINIIGQAPGLKTQEAGLYWKDKSGDRLRDWLGVDEDTFYNSGYFAVLPMDFYFPG 91

Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
              + +L        +       EL   ++ L IG   + ++             K    
Sbjct: 92  HGKSGDLPPRTGFAEKWHPQLLQELPDIQLTLLIGQYAQAYYLQEKISGKVTERVKHYKD 151

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKAL 258
             P         VHP       + + P  +      L   +K  L
Sbjct: 152 YLPAY----FPLVHPSPRNQIWMTKNPWFEAEVVPDLKKRIKTIL 192


>gi|332362184|gb|EGJ39986.1| uracil DNA glycosylase [Streptococcus sanguinis SK49]
          Length = 194

 Score = 44.4 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 51/164 (31%), Gaps = 14/164 (8%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP--WHPPG 162
            +   + I+G  P      +G  +  K+G+ L + L   E          + P  ++ PG
Sbjct: 32  PKNARINIVGQAPGLKTQQAGLYWKDKSGDRLREWLGVDEETFYHSGYFAVLPMDFYFPG 91

Query: 163 NRNLSNIEMEICRPIIMRQIE---LISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
           +    ++           Q+    L   ++ + IG   + ++ +           +    
Sbjct: 92  HGKSGDLPPRKDFADKWHQLILELLPDIELTILIGQYAQKYYLHQKGNIKLTETVQHYQD 151

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258
             P         VHP       + + P   +     L  L + +
Sbjct: 152 YLPD----FFPLVHPSPRNQIWMAKNPWFTEQVVPDLQALVQKI 191


>gi|269216638|ref|ZP_06160492.1| uracil DNA glycosylase family protein [Slackia exigua ATCC 700122]
 gi|269129872|gb|EEZ60955.1| uracil DNA glycosylase family protein [Slackia exigua ATCC 700122]
          Length = 232

 Score = 44.4 bits (103), Expect = 0.015,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 46/148 (31%), Gaps = 12/148 (8%)

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP----- 161
           G  + IIG  P      +  P++ ++G+ L   L              I P         
Sbjct: 72  GARIAIIGQAPGRVAQEARMPWNDRSGDRLRDWLGIDRDTFYDPEKIAIIPMDFYFPGSG 131

Query: 162 GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221
            + +L   +    +        +   ++ + +G+     +    +  +  ++ +      
Sbjct: 132 KSGDLPPRKGFAEKWHPKLFALMPDIRLTVLVGSYATRTYLGLKSSASLTDVVRNHAAYL 191

Query: 222 PHSIIPTLATVHPQELIQYPLI-KKNTW 248
           P         VHP    +  +  KKN W
Sbjct: 192 PD----FFPLVHPSP--RNQIWMKKNPW 213


>gi|94501847|ref|ZP_01308358.1| putative uracil-DNA glycosylase family protein [Oceanobacter sp.
           RED65]
 gi|94425980|gb|EAT10977.1| putative uracil-DNA glycosylase family protein [Oceanobacter sp.
           RED65]
          Length = 211

 Score = 44.4 bits (103), Expect = 0.015,   Method: Composition-based stats.
 Identities = 25/195 (12%), Positives = 67/195 (34%), Gaps = 32/195 (16%)

Query: 80  LKSLLRSFHDC----HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           L + ++    C     L       +    ++  +++IIG  P    + + +PF   +G  
Sbjct: 3   LHAEIQHCLICQSNLPLPP---RPVL-QFSQNSNILIIGQAPGQKAHHAHQPFKDASGKR 58

Query: 136 LDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQI--ELISPKIL 190
           L + L   +S      ++ +  ++  +P   ++       IC     +++   +   +++
Sbjct: 59  LREWLGLTESEFYDADKVALMPMAFCYPGKGKSGDLPPPPICHQTWHKRLLDHMQKIQLV 118

Query: 191 LFIGNKTKNFFFNN-------DAQKTYQNLGKWSNLCTPHSIIP---------TLATVHP 234
           + +G  ++  +             ++ +    +         +           +A  HP
Sbjct: 119 VLLGQYSQRHYLTQATDFPWLKPSESERCQKLYKQYNNLADRVANQSTSLPESIMALPHP 178

Query: 235 QELIQYPLI-KKNTW 248
               +  L  KKN W
Sbjct: 179 SP--RNQLWLKKNPW 191


>gi|167624706|ref|YP_001675000.1| hypothetical protein Shal_2788 [Shewanella halifaxensis HAW-EB4]
 gi|167354728|gb|ABZ77341.1| conserved hypothetical protein [Shewanella halifaxensis HAW-EB4]
          Length = 201

 Score = 44.4 bits (103), Expect = 0.015,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 55/177 (31%), Gaps = 28/177 (15%)

Query: 75  CSLHELKSLLRSFHDC----HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSG 130
            +  +L++ +     C     L       I     +   ++I G  P    +  G+PF  
Sbjct: 5   RNFIQLQADIAQCQICSEFLPLEP---KPIVQLG-KYAKILIAGQAPGQKTHYKGRPFGD 60

Query: 131 KTGNMLDKML---QSIEIMRTQIHISMISPWHP---------PGNRNLSNIEMEICRPII 178
            +G  L   L   +          I  +   +P          G++       +  R  +
Sbjct: 61  ASGERLRTWLGVTKEQFYDPNLFAILPMGFCYPGSYTSADKQSGDKPPRPECAKKWRQDV 120

Query: 179 MRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
           + ++E I  ++ L +G     +          Q++  W  L        TL   HP 
Sbjct: 121 LNRLEHI--ELTLLVGKYAIEWHLKQKLSV-TQSVANWQALWPN-----TLVMPHPS 169


>gi|83594973|ref|YP_428725.1| uracil-DNA glycosylase superfamily protein [Rhodospirillum rubrum
           ATCC 11170]
 gi|83577887|gb|ABC24438.1| Uracil-DNA glycosylase superfamily [Rhodospirillum rubrum ATCC
           11170]
          Length = 199

 Score = 44.4 bits (103), Expect = 0.015,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 54/188 (28%), Gaps = 27/188 (14%)

Query: 90  CHLCST----SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML----- 140
           C LC+         +    +    L+I+G  P    + +G P++  +G+ L   +     
Sbjct: 22  CTLCAAHLPLGPRPVF-RVSVTARLLIVGQAPGTRVHATGIPWNDASGDRLRAWMGVDRE 80

Query: 141 ---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197
               +  I      +         G+         + +P     +  I+    L +G   
Sbjct: 81  TFYDARRIAVVPTGLCYPGRLAKGGDAPPRPDCAPLWQPAFRAVLPGIAL--TLLVGGYA 138

Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTW---HALIT 253
           + F+       T +                     HP    +      ++ W     L  
Sbjct: 139 QGFYLGRRDSMTERVH------RFDQGDPAFFPLPHPSW--RNTAWINRHPWFEAEVLPA 190

Query: 254 LKKALKNL 261
           L++ +  L
Sbjct: 191 LRERVAAL 198


>gi|251793993|ref|YP_003008725.1| hypothetical protein NT05HA_2336 [Aggregatibacter aphrophilus
           NJ8700]
 gi|247535392|gb|ACS98638.1| hypothetical protein NT05HA_2336 [Aggregatibacter aphrophilus
           NJ8700]
          Length = 193

 Score = 44.4 bits (103), Expect = 0.015,   Method: Composition-based stats.
 Identities = 17/153 (11%), Positives = 45/153 (29%), Gaps = 15/153 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
                + I+G  P      +   ++ K+G+ L + L           +  + P       
Sbjct: 32  PTSARINIVGQAPGVKAEQTRLYWNDKSGDRLREWLGVDRETFYHSDLFAVIPMDFYYPG 91

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    +       +L + ++ + IG   + ++   +     + +  ++  
Sbjct: 92  KGKSGDLPPRKGFAEKWHPQILADLPNIELTILIGQYAQKYYLPENTLNVTETVQNYAKF 151

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNT 247
                    L  VHP       L + P  ++  
Sbjct: 152 LPHF-----LPLVHPSPRNQLWLAKNPWFEQEV 179


>gi|307708325|ref|ZP_07644792.1| uracil-DNA glycosylase superfamily [Streptococcus mitis NCTC 12261]
 gi|307615771|gb|EFN94977.1| uracil-DNA glycosylase superfamily [Streptococcus mitis NCTC 12261]
          Length = 192

 Score = 44.4 bits (103), Expect = 0.016,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 46/165 (27%), Gaps = 15/165 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + IIG  P      +G  +  K+G+ L   L   E          + P       
Sbjct: 32  PKTARINIIGQAPGLKTQEAGLYWKDKSGDRLRDWLGVDEDTFYNSGYFAVLPMDFYFPG 91

Query: 165 NLSNIEMEICRPI---IMRQIELISP--KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
           +  + ++            Q+    P  ++ L IG   + ++             K    
Sbjct: 92  HGKSGDLPPRADFAEKWHPQLLQELPDIQLTLLIGQYAQAYYLQEKVSGKVTERVKHYQN 151

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKAL 258
             P         VHP       + + P  +      L   +K  L
Sbjct: 152 YLPTY----FPLVHPSPRNQIWMAKNPWFEAEVVPDLKKRIKTIL 192


>gi|149186996|ref|ZP_01865304.1| hypothetical protein ED21_25141 [Erythrobacter sp. SD-21]
 gi|148829385|gb|EDL47828.1| hypothetical protein ED21_25141 [Erythrobacter sp. SD-21]
          Length = 172

 Score = 44.4 bits (103), Expect = 0.016,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 49/141 (34%), Gaps = 9/141 (6%)

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP--- 157
            A+ +    L+IIG  P    + +G P+  K+G+ L +     +          + P   
Sbjct: 8   VASFSPTARLLIIGQAPGSIVHQTGIPWDDKSGDRLREWTGLSKEQMYDPTRVALVPMGF 67

Query: 158 WHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQKTYQNLGK 215
            +P             C P   R++  + P  ++ L +G   ++++  +  + +     +
Sbjct: 68  CYPGKASGGDKPPRPECAPQWHRRVLDVLPEDRLTLLVGTYAQSYYLPDARKLSMTERVR 127

Query: 216 WSNLCTPHSIIPTLATVHPQE 236
                 P      L   HP  
Sbjct: 128 RFREFLP----RFLPLPHPAW 144


>gi|187917896|ref|YP_001883459.1| hypothetical protein BH0013 [Borrelia hermsii DAH]
 gi|119860744|gb|AAX16539.1| hypothetical protein BH0013 [Borrelia hermsii DAH]
          Length = 192

 Score = 44.4 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 27/79 (34%), Gaps = 7/79 (8%)

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
           +I+   PK +L          F N   +     G           IP + T  P   +  
Sbjct: 119 EIKNQQPKAILACEEVE---LFLNQNLRIQIVRG----FELNFKGIPIVFTYLPTSQVTN 171

Query: 241 PLIKKNTWHALITLKKALK 259
           P +KK  W  L  +K  +K
Sbjct: 172 PELKKEIWQDLKIIKGIIK 190


>gi|322391531|ref|ZP_08065000.1| uracil DNA glycosylase [Streptococcus peroris ATCC 700780]
 gi|321145614|gb|EFX41006.1| uracil DNA glycosylase [Streptococcus peroris ATCC 700780]
          Length = 205

 Score = 44.4 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 54/167 (32%), Gaps = 17/167 (10%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159
            +   + IIG  P      +G  +  K+G+ L + L   +          +  +  +   
Sbjct: 41  PKTARINIIGQAPGLKTQEAGLYWKDKSGDRLREWLGVDEDTFYNSGYFAVMPMDFYFPG 100

Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNL-GKWSN 218
              + +L        +       EL   ++ L IG   + ++ +        +   ++ +
Sbjct: 101 HGKSGDLPPRPGFAEKWHPELLKELPDIQLTLLIGQYAQAYYLHEKVSGKVTDRVHRFKD 160

Query: 219 LCTPHSIIPTLATVHPQELIQYPLI-KKNTW---HALITLKKALKNL 261
               +        VHP    +  +  KKN W     L  LK  +  +
Sbjct: 161 YLPDY-----FPLVHPSP--RNQIWMKKNPWFEEEVLPDLKDRIHKI 200


>gi|118602465|ref|YP_903680.1| hypothetical protein Rmag_0450 [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|118567404|gb|ABL02209.1| hypothetical protein Rmag_0450 [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 139

 Score = 44.4 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 229 LATVHPQELIQYPLIKKNTWHALITLKKALK 259
             T HP E++    +K+ TW  L  +K+ LK
Sbjct: 109 FVTHHPSEVLTNEQLKRETWEVLKRVKQYLK 139


>gi|332366797|gb|EGJ44538.1| uracil DNA glycosylase [Streptococcus sanguinis SK1059]
          Length = 194

 Score = 44.4 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 23/197 (11%), Positives = 60/197 (30%), Gaps = 22/197 (11%)

Query: 76  SLHEL-KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           +L ++ K+++    +       +  + A   +   + I+G  P      +G  +  K+G+
Sbjct: 3   TLEDITKAIMADPENQEFTKQGIKPLFAA-PKNARINIVGQAPGLKTQEAGLYWKDKSGD 61

Query: 135 MLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP------- 187
            L + L   E          + P       +  + ++   +    +      P       
Sbjct: 62  RLREWLDVDEDTFYNSGYFAVLPMDFYFPGHGKSGDLPPRKDFADK---WHQPILELLPD 118

Query: 188 -KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYP 241
            ++ + IG   + ++ +           +      P         VHP       + + P
Sbjct: 119 IELTILIGQYAQKYYLHQKGNIKLTETVQHYQDYLPD----FFPLVHPSPRNQIWMAKNP 174

Query: 242 LIKKNTWHALITLKKAL 258
              +     L  L + +
Sbjct: 175 WFAEQVVPDLQALVQKI 191


>gi|251781919|ref|YP_002996221.1| uracil DNA glycosylase superfamily protein [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|242390548|dbj|BAH81007.1| uracil DNA glycosylase superfamily protein [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|323126735|gb|ADX24032.1| hypothetical protein SDE12394_02470 [Streptococcus dysgalactiae
           subsp. equisimilis ATCC 12394]
          Length = 191

 Score = 44.4 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 53/161 (32%), Gaps = 14/161 (8%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   ++I+G  P      +   ++ ++G  L   L        +  +  I P       
Sbjct: 29  PKTARIIIVGQAPGIVAQETKLYWNDRSGIRLRDWLGVDNDTFYRSGLFGIIPMDFYYPG 88

Query: 165 NLSNIEMEICRPI---IMRQIELISPKI--LLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
              + ++             +  + P++   + +G   ++F+  N A KT     +    
Sbjct: 89  KGKSGDLPPRNGFAAKWHPPLRELMPEVELTILVGRYAQDFYLGNKAYKTLTETVRHFAD 148

Query: 220 CTPHSIIPTLATVHPQELIQYPLI-KKNTW--HALITLKKA 257
             P         VHP    +  L   KN+W    L+ + + 
Sbjct: 149 YLPDY----FPLVHPSP--RNQLWLAKNSWFEQDLLPILQK 183


>gi|46201865|ref|ZP_00208281.1| COG1573: Uracil-DNA glycosylase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 141

 Score = 44.4 bits (103), Expect = 0.019,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 37/125 (29%), Gaps = 28/125 (22%)

Query: 85  RSFHDCHL-----CSTSLS-------TICATQTEGQDLMIIGYTPS-DSDNISGKPFSGK 131
                C        +            + +       L+++G  P     N +G+PF+G 
Sbjct: 8   ADCGLCPRLAAFRRANRAQYPGWHHDPVPSFGGLDSRLLVVGLAPGLKGANRTGRPFTGD 67

Query: 132 T-GNMLDKMLQSIEIMRTQ-------------IHISMISPWHPPGNRNLSNIEMEICRPI 177
             G++L   L    + R                 I+  +   PP        E   CRP 
Sbjct: 68  YAGDLLYSSLLHFGLARGDYRQAADDGLELVGCRITNAARCVPP-ANKPLPAEFAACRPF 126

Query: 178 IMRQI 182
           +  +I
Sbjct: 127 LAAEI 131


>gi|322389708|ref|ZP_08063255.1| uracil DNA glycosylase [Streptococcus parasanguinis ATCC 903]
 gi|321143547|gb|EFX38978.1| uracil DNA glycosylase [Streptococcus parasanguinis ATCC 903]
          Length = 194

 Score = 44.0 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 53/168 (31%), Gaps = 22/168 (13%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + IIG  P      +G  +  K+G+ L + L   E       +  + P       
Sbjct: 32  PKTARINIIGQAPGMKTEEAGIYWKDKSGDRLREWLGVDEDTFYNSGLFAVIPMDFYFPG 91

Query: 165 NLSNIEMEICRPI---IMRQIELISP--KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
           +  + ++   +        Q+    P  ++ L IG   + ++ +          GK +  
Sbjct: 92  HGKSGDLPPRKGFAEKWHPQLLKECPDIELTLLIGQYAQAYYLHEKVS------GKVTER 145

Query: 220 CTPHSIIPTLATV----HPQ-----ELIQYPLIKKNTWHALITLKKAL 258
                    L T     HP       + + P  +      L TL + +
Sbjct: 146 VHHFKDY--LPTYFPLVHPSPRNQIWMAKNPWFEAEVVAELQTLVQEI 191


>gi|228477404|ref|ZP_04062040.1| uracil-DNA glycosylase [Streptococcus salivarius SK126]
 gi|228250839|gb|EEK10027.1| uracil-DNA glycosylase [Streptococcus salivarius SK126]
          Length = 194

 Score = 44.0 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 56/199 (28%), Gaps = 32/199 (16%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQ--------DLMIIGYTPSDSDNISGK 126
            +L EL   + S           +     Q             + I+G  P      SG 
Sbjct: 2   ETLEELTQAIMS--------DEQNKAFTEQGIKPLFTIPKTARINIVGQAPGIRAQESGL 53

Query: 127 PFSGKTGNMLDKMLQSIEIMRTQIHISMISP--WHPPGNRNL---SNIEMEICRPIIMRQ 181
            ++  +G+ L   +        +  +  I P  ++ PG+         +    +      
Sbjct: 54  YWNDPSGDNLRDWMGVSREEFYESGMFAIVPMDFYFPGHGKSGDLPPRKGFADKWHEKVL 113

Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQ----- 235
                 ++ + +GN  + ++ +  +       +  + +             VHP      
Sbjct: 114 ALAPDIQLTILVGNYAQRYYLHQKSSAKLTDTVKHYKDYLPEF-----FPLVHPSPRNNI 168

Query: 236 ELIQYPLIKKNTWHALITL 254
              + P   +     L TL
Sbjct: 169 WQAKNPWFMEEVVPDLKTL 187


>gi|157151546|ref|YP_001450136.1| uracil-DNA glycosylase [Streptococcus gordonii str. Challis substr.
           CH1]
 gi|157076340|gb|ABV11023.1| uracil-DNA glycosylase [Streptococcus gordonii str. Challis substr.
           CH1]
          Length = 194

 Score = 44.0 bits (102), Expect = 0.020,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 51/165 (30%), Gaps = 16/165 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + IIG  P      +G  +  K+G+ L + L   E       +  + P       
Sbjct: 32  PKTARINIIGQAPGMKTEAAGLYWKDKSGDRLREWLGVDEDTFYNSGLFAVIPMDFYFPG 91

Query: 165 NLSNIEMEICRPI---IMRQIELISP--KILLFIGNKTKNFFFNNDAQKTYQNL-GKWSN 218
           +  + ++   +        Q+    P  ++ L IG   + ++ +             + N
Sbjct: 92  HGKSGDLPPRKGFAEKWHPQLLKECPDIELTLLIGQYAQAYYLHEKVSGKVTERVHHFKN 151

Query: 219 LCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258
               +        VHP       + + P  +      L  L + +
Sbjct: 152 YLPEY-----FPLVHPSPRNQIWMAKNPWFEAEVVPELQALVQKI 191


>gi|322377832|ref|ZP_08052321.1| uracil DNA glycosylase family protein [Streptococcus sp. M334]
 gi|321281255|gb|EFX58266.1| uracil DNA glycosylase family protein [Streptococcus sp. M334]
          Length = 192

 Score = 44.0 bits (102), Expect = 0.021,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 46/165 (27%), Gaps = 15/165 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159
            +   + IIG  P      +G  +  K+G+ L   L   +          +  +  +   
Sbjct: 32  PKTARINIIGQAPGLKTQEAGLYWKDKSGDRLRDWLGVDEDTFYNSGYFAVLPMDFYFPG 91

Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
              + +L        +       EL   ++ L IG   + ++             K    
Sbjct: 92  HGKSGDLPPRAGFAEKWHPQLLQELPDIQLTLLIGQYAQAYYLQEKVSGKVTERVKHYQN 151

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKAL 258
             P         VHP       + + P  +      L   +K  L
Sbjct: 152 YLPAY----FPLVHPSPRNQIWMAKNPWFESEVVPDLKKRIKTIL 192


>gi|222152664|ref|YP_002561839.1| uracil DNA glycosylase superfamily protein [Streptococcus uberis
           0140J]
 gi|222113475|emb|CAR41203.1| uracil DNA glycosylase superfamily protein [Streptococcus uberis
           0140J]
          Length = 191

 Score = 44.0 bits (102), Expect = 0.021,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 56/167 (33%), Gaps = 15/167 (8%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPP 161
            +   ++I+G  P      +   ++ ++G  L + L              I  +  ++P 
Sbjct: 29  PKTAKIVIVGQAPGIIAQETKLFWNDRSGLKLREWLGVDNDTFYYSGHFAILPMDFYYPG 88

Query: 162 GNR--NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
             +  +L   +    +        L   ++++ +G   +N++     +K      K    
Sbjct: 89  KGKSGDLPPRKNFAPKWHKRLLDRLEEVELIILVGQYAQNYYLGERQKKNLTETVKAFQD 148

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHAL-ITLKKALKN 260
             P         VHP       L + P  ++     L   ++K L++
Sbjct: 149 YLPTY----FPLVHPSPRNQIWLKRNPWFEEEVVPQLQKKVQKILRS 191


>gi|307706149|ref|ZP_07642968.1| uracil DNA glycosylase superfamily protein [Streptococcus mitis
           SK321]
 gi|307618549|gb|EFN97697.1| uracil DNA glycosylase superfamily protein [Streptococcus mitis
           SK321]
          Length = 196

 Score = 44.0 bits (102), Expect = 0.021,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 47/167 (28%), Gaps = 15/167 (8%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159
            +   + IIG  P      +G  +  K+G+ L   L   + I        +  +  +   
Sbjct: 32  PKTARINIIGQAPGLKTQEAGLYWKDKSGDRLRAWLGVDEDIFYNSGYFAVLPMDFYFPG 91

Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
              + +L        +       EL   ++ L IG   + ++             K    
Sbjct: 92  HGKSGDLPPRTGFAEKWHPQLLQELPDIQLTLLIGQYAQAYYLKEKISGKVTERVKHYQN 151

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKALKN 260
             P         VHP       + + P  +      L   +K  L  
Sbjct: 152 YLPTY----FPLVHPSPRNQIWMAKNPWFESEVVPDLKKRIKTILGE 194


>gi|217977513|ref|YP_002361660.1| hypothetical protein Msil_1333 [Methylocella silvestris BL2]
 gi|217502889|gb|ACK50298.1| conserved hypothetical protein [Methylocella silvestris BL2]
          Length = 183

 Score = 44.0 bits (102), Expect = 0.022,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 52/171 (30%), Gaps = 20/171 (11%)

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGN 163
              L+I    P    + SG PF+  +G+ L   +   +      ++I I+ +    P   
Sbjct: 15  SARLLIASQAPGIRVHQSGLPFNDASGDRLRLWMNVSRDAFYDESRIAIAPMGFCFPGHG 74

Query: 164 RNL---SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN------NDAQKTYQNLG 214
                                  +     +L IG   +++ F           +  + + 
Sbjct: 75  PARSDLPPRPECRALWHDELFAAMGQVDCVLAIGRYAQDYHFARLGRPLPKGARLDEIVR 134

Query: 215 KWSNLCTPHSIIPTLATVHPQELIQYPLI-KKNTWHA---LITLKKALKNL 261
           +W         I  L   HP    +     K+N W     L  L++ +  L
Sbjct: 135 RWREFAGSAPKIIALP--HPSW--RNSGWLKRNPWFDAEVLPALREEVARL 181


>gi|324994557|gb|EGC26470.1| uracil DNA glycosylase [Streptococcus sanguinis SK678]
 gi|327462548|gb|EGF08872.1| uracil DNA glycosylase [Streptococcus sanguinis SK1]
 gi|327474406|gb|EGF19812.1| uracil DNA glycosylase [Streptococcus sanguinis SK408]
 gi|327489789|gb|EGF21579.1| uracil DNA glycosylase [Streptococcus sanguinis SK1058]
          Length = 193

 Score = 44.0 bits (102), Expect = 0.022,   Method: Composition-based stats.
 Identities = 20/167 (11%), Positives = 48/167 (28%), Gaps = 20/167 (11%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + I+G  P      +G  +  K+G+ L + L   E          + P       
Sbjct: 32  PKNARINIVGQAPGLKTQQAGLYWKDKSGDRLREWLGVDEETFYHSGYFAVLPMDFYFPG 91

Query: 165 NLSNIEMEICRPIIMRQIELISP--------KILLFIGNKTKNFFFNNDAQKTYQNLGKW 216
           +  + ++   +    +      P        ++ + IG   + ++ +           + 
Sbjct: 92  HGKSGDLPPRKDFADK---WHQPILELLPDIELTILIGQYAQKYYLHQKGNIKLTETVQH 148

Query: 217 SNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258
                P         VHP       + + P   +     L  L + +
Sbjct: 149 YQDYLPD----FFPLVHPSPRNQIWMAKNPWFAEQVVPDLQALVQKI 191


>gi|225870935|ref|YP_002746882.1| uracil DNA glycosylase superfamily protein [Streptococcus equi
           subsp. equi 4047]
 gi|225700339|emb|CAW94647.1| uracil DNA glycosylase superfamily protein [Streptococcus equi
           subsp. equi 4047]
          Length = 191

 Score = 44.0 bits (102), Expect = 0.023,   Method: Composition-based stats.
 Identities = 20/166 (12%), Positives = 54/166 (32%), Gaps = 15/166 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   ++I+G  P      +   ++ ++G  L   L   +    Q  +  + P       
Sbjct: 29  PQTARIVIVGQAPGIVAQETRLYWNDRSGVRLRAWLGVDDRTFYQSGLFGVLPMDFYYPG 88

Query: 165 NLSNIEMEICRPIIMR-----QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
              + ++   +    +        +   ++++ +G   + ++     ++      +    
Sbjct: 89  KGKSGDLPPRKGFAAKWHGPLMALMPQVELVVLVGQYAQQYYLGEGCRRNLTETVQHFED 148

Query: 220 CTPHSIIPTLATVHPQELIQYPLI-KKNTW--HALI-TLKKALKNL 261
             P         VHP    +  L   KN W    L+  LK  ++ +
Sbjct: 149 YLPDY----FPLVHPSP--RNQLWLAKNAWFEEELVPVLKDKVRQI 188


>gi|119952819|ref|YP_945028.1| hypothetical protein BT0013 [Borrelia turicatae 91E135]
 gi|119861590|gb|AAX17358.1| hypothetical protein BT0013 [Borrelia turicatae 91E135]
          Length = 192

 Score = 44.0 bits (102), Expect = 0.023,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 26/79 (32%), Gaps = 7/79 (8%)

Query: 181 QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQY 240
           +I    PK +L          F N   +     G           IP + T  P   +  
Sbjct: 119 EINNQQPKAILACEEVA---LFLNQHLRIQIVRG----FELNFKGIPIVFTYLPTNQVTN 171

Query: 241 PLIKKNTWHALITLKKALK 259
           P IKK  W  L  +K  +K
Sbjct: 172 PEIKKEIWQDLKIIKGIIK 190


>gi|149922039|ref|ZP_01910480.1| hypothetical protein PPSIR1_24229 [Plesiocystis pacifica SIR-1]
 gi|149817091|gb|EDM76572.1| hypothetical protein PPSIR1_24229 [Plesiocystis pacifica SIR-1]
          Length = 194

 Score = 44.0 bits (102), Expect = 0.023,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 53/203 (26%), Gaps = 31/203 (15%)

Query: 77  LHELKSLLRSFHDCHLCST---SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
           + E   LL     C LC         I         ++I G  P    +  G PF   +G
Sbjct: 1   MSEPSKLLAEIRRCTLCEGLPLGPRPIV-QLDARARILIAGQAPGRLTHAKGVPFDDPSG 59

Query: 134 NMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI- 189
             L   L   ++     ++  +  +    P   ++        C       +    P + 
Sbjct: 60  ERLRDWLGVDRATFYDASKFAVVPMGFCFPGSGKSGDLPPRPECAERWREPVLEALPAVA 119

Query: 190 -LLFIGNKTKNFFFNNDAQKT-----YQNLGKWSNLCTPHSIIPTLATVHPQ-----ELI 238
             L +G     +    + + T          +W            L   HP         
Sbjct: 120 LTLVLGRHAMAWHLGLERRATLTSVVEGWRARWPEH---------LPLPHPSPRNRRWFA 170

Query: 239 QYPLIKKNTWHALITLKKALKNL 261
             P  +      L  L+  +  L
Sbjct: 171 NNPWFEAEV---LPVLRGRVAEL 190


>gi|256845525|ref|ZP_05550983.1| uracil-DNA glycosylase [Fusobacterium sp. 3_1_36A2]
 gi|256719084|gb|EEU32639.1| uracil-DNA glycosylase [Fusobacterium sp. 3_1_36A2]
          Length = 197

 Score = 44.0 bits (102), Expect = 0.024,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 46/168 (27%), Gaps = 18/168 (10%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            E   ++I+G  P      +   +  K+G+ L       E      ++  I P       
Sbjct: 35  PEKARIVIVGQAPGLKAQENRLYWKDKSGDKLRIWTGIDEKTFYSSNLLAIIPMDFYYPG 94

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    +        L + ++ + IG   + F+     +         ++ 
Sbjct: 95  KGKSGDLPPRKDFGDKWHNKILELLPNVELFILIGKYAQGFYLKGKLKD------NLTDT 148

Query: 220 CTPHSII--PTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKN 260
              +          VHP       L + P  ++     L  +   +  
Sbjct: 149 VKAYKEYLPKFFPIVHPSPLNIGWLKKNPWFEEEVVPTLKEMVTKIME 196


>gi|212695914|ref|ZP_03304042.1| hypothetical protein ANHYDRO_00447 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212677037|gb|EEB36644.1| hypothetical protein ANHYDRO_00447 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 190

 Score = 44.0 bits (102), Expect = 0.024,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 54/171 (31%), Gaps = 21/171 (12%)

Query: 79  ELKSLLRSFHDCHLCSTSLSTICATQ-----TEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
           +++ ++          T               +   ++ IG  P      SG  F+ K+G
Sbjct: 2   QIEKIIEKLKADPRNKTYTKR--GIGPIFQFNKNAKILTIGQAPGKKVEESGILFNDKSG 59

Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE------LISP 187
             L   L  I +         I P          + + +  R  I ++        L + 
Sbjct: 60  ENLVDWL-GISMDTLHGENFSIIPMDFYYPGKAKSGD-KAPRKFIAKEYHPLLLEGLKNI 117

Query: 188 KILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQEL 237
            + + IG   + F+  +D +K   + +  + +    +        VHP  L
Sbjct: 118 NLTILIGAYAQKFYLKDDFKKNLTETVRNFKDYLPEY-----FPLVHPSPL 163


>gi|324991057|gb|EGC22991.1| uracil DNA glycosylase [Streptococcus sanguinis SK353]
          Length = 194

 Score = 43.6 bits (101), Expect = 0.026,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 60/194 (30%), Gaps = 16/194 (8%)

Query: 76  SLHEL-KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           +L ++ K+++    +       +  + A   +   + I+G  P      +G  +  K+G+
Sbjct: 3   TLEDITKAIMADPENQEFTKQGIKPLFAA-PKNARINIVGQAPGLKTQEAGLYWKDKSGD 61

Query: 135 MLDKML--QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ---IELISPKI 189
            L   L         +     +   ++ PG+    ++           Q     L   ++
Sbjct: 62  RLRTWLGVDEDTFYNSGYFAVLPMDFYFPGHGKSGDLPPRKDFADKWHQPILELLPDIEL 121

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIK 244
            + IG   + ++ +           +      P         VHP       + + P   
Sbjct: 122 TILIGQYAQKYYLHQKGNIKLTETVQHYQDYLPD----FFPLVHPSPRNQIWMAKNPWFA 177

Query: 245 KNTWHALITLKKAL 258
           +     L  L + +
Sbjct: 178 EQVVPDLQALVQKI 191


>gi|300711343|ref|YP_003737157.1| hypothetical protein HacjB3_09910 [Halalkalicoccus jeotgali B3]
 gi|299125026|gb|ADJ15365.1| hypothetical protein HacjB3_09910 [Halalkalicoccus jeotgali B3]
          Length = 218

 Score = 43.6 bits (101), Expect = 0.026,   Method: Composition-based stats.
 Identities = 17/156 (10%), Positives = 40/156 (25%), Gaps = 14/156 (8%)

Query: 89  DCHL-CSTSLSTICATQTEGQDLMIIGYTPSDS-DNISGKPFS-GKTGNMLDKMLQSIEI 145
            C   CS  +  +        D  +IG  P+      +  PF+    G  + + L     
Sbjct: 17  ACETACSAGVEAVFGYGDANADFHVIGDHPAIHGGANTAVPFTQTPAGEAIQRALFETGF 76

Query: 146 ----MRTQIHISMISPWHPPGNRNLS----NIEMEICRPIIMRQIELISPKILLFIGNKT 197
                  + H+S     +                         ++  I+  +L+ +G + 
Sbjct: 77  AGEPYSDEPHLSNCFLSYLHMCCPPDGDPTAESYANMERFFDAELRAIAAHVLVSVGERA 136

Query: 198 KNFFFNNDAQKTYQN---LGKWSNLCTPHSIIPTLA 230
                +    +  +    +          S    + 
Sbjct: 137 TEHVIDQYTARNGRIELDMATLHATEIRGSGFLVVP 172


>gi|304312381|ref|YP_003811979.1| Uracil-DNA glycosylase family protein [gamma proteobacterium HdN1]
 gi|301798114|emb|CBL46336.1| Uracil-DNA glycosylase family protein [gamma proteobacterium HdN1]
          Length = 192

 Score = 43.6 bits (101), Expect = 0.026,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 54/154 (35%), Gaps = 18/154 (11%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ---SIEIMRTQIHISMISPWHP- 160
                ++I    P    + +G PF+  +G  L + L     I     +I I  +   +P 
Sbjct: 25  HPDARILIASQAPGRKVHETGIPFNDPSGVRLREWLGISPEIFYDPHKIAIIPMGFCYPG 84

Query: 161 ---PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS 217
               G+         + R  ++  ++  + ++ + IG     +   +  ++   ++ +  
Sbjct: 85  RGRSGDLPPRPECAPLWRARLLSHLK--NLELTIAIGKYAIAYHLPDQRKRPLTDVVRDW 142

Query: 218 NLCTPHSIIPTLATVHPQ-----ELIQYPLIKKN 246
               PH    T+A  HP       L + P  +  
Sbjct: 143 QAHWPH----TIAIPHPSPRNNIWLKRNPWFEAE 172


>gi|309799861|ref|ZP_07694067.1| uracil DNA glycosylase superfamily [Streptococcus infantis SK1302]
 gi|308116508|gb|EFO53978.1| uracil DNA glycosylase superfamily [Streptococcus infantis SK1302]
          Length = 201

 Score = 43.6 bits (101), Expect = 0.028,   Method: Composition-based stats.
 Identities = 22/161 (13%), Positives = 48/161 (29%), Gaps = 18/161 (11%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159
            +   + IIG  P      +G  +  K+G+ L + L   +          +  +  +   
Sbjct: 42  PKTARINIIGQAPGLKTQEAGLYWKDKSGDRLREWLGVDEDTFYNSGYFAVMPMDFYFPG 101

Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
              + +L        +       EL   ++ L IG   + ++         +  GK ++ 
Sbjct: 102 HGKSGDLPPRPGFAEKWHPKLLKELPDIQLTLLIGQYAQAYYL------YEKVSGKVTDR 155

Query: 220 CTPHSII--PTLATVHPQ-----ELIQYPLIKKNTWHALIT 253
                         VHP       + + P  ++     L  
Sbjct: 156 VHRFKDYLPDYFPLVHPSPRNQIWMKKNPWFEEEVVPDLKK 196


>gi|330721642|gb|EGG99656.1| hypothetical protein imdm_849 [gamma proteobacterium IMCC2047]
          Length = 244

 Score = 43.6 bits (101), Expect = 0.028,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 67/233 (28%), Gaps = 36/233 (15%)

Query: 29  DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFH 88
           ++P      ++    +  ++ ++  T    +++     A ++ Q   +  E +  L S  
Sbjct: 36  EQPLPSEQVQAVDGVQKPETVLEKATITPPLNAQPEPVAPTVGQTVQTNPEFR--LASI- 92

Query: 89  DCHLCSTSLSTICATQTEGQDLMIIGYTP---SDSDNISGKPFSGKTGNMLDKMLQSIEI 145
                                 M++   P   S     + +        +L  ML S+ I
Sbjct: 93  ----------IFPGHG------MVVTQVPTTSSADPLDAQQL------KLLGNMLASVGI 130

Query: 146 MRTQIHISMISPW---HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF 202
            +          W     PG         +  +  +  Q        +L +G     +  
Sbjct: 131 NQLSKPEVTFFNWPMLRSPGFDQSEKAACQASQAFLNGQKSKYQVSFVLLMGEGAGRYLV 190

Query: 203 NNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
               +      G+        +  P L T   + +I  P +K   W  L  L+
Sbjct: 191 -PQVEGFEGARGQL----ISDASPPLLLTDDLEHVIAEPALKARVWRDLQPLR 238


>gi|326328733|ref|ZP_08195071.1| uracil DNA glycosylase family protein [Nocardioidaceae bacterium
           Broad-1]
 gi|325953476|gb|EGD45478.1| uracil DNA glycosylase family protein [Nocardioidaceae bacterium
           Broad-1]
          Length = 194

 Score = 43.6 bits (101), Expect = 0.029,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 48/147 (32%), Gaps = 16/147 (10%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPP 161
                 +IIG  P      SG P++  +G  L + L   +      T   I  +  ++P 
Sbjct: 32  HPEARCLIIGQAPGIRAQQSGIPWNDASGRRLVEWLGVDERTFRDPTAFAILPMDFYYPG 91

Query: 162 GNRNLSNIEMEICRPIIMRQIELISPKI--LLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                         PI   ++  + P+I   L +G+  +  + +  +  T +    + + 
Sbjct: 92  KGATGDLPPRADFAPIWHPRLLELMPQIGLTLLVGDYAQRHYLDGKSSLTERVR-SFRDF 150

Query: 220 CTPHSIIPTLATVHPQEL-----IQYP 241
                       VHP  L      + P
Sbjct: 151 LPDR-----FPLVHPSPLNFRWQSRNP 172


>gi|325694647|gb|EGD36555.1| uracil DNA glycosylase [Streptococcus sanguinis SK150]
          Length = 194

 Score = 43.6 bits (101), Expect = 0.030,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 61/194 (31%), Gaps = 16/194 (8%)

Query: 76  SLHEL-KSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
           +L ++ K+++    +       +  + A   +   + I+G  P      +G  +  K+G+
Sbjct: 3   TLDDITKAIMADPENEEFTEKGIKPLFAA-PKNARINIVGQAPGLKTQEAGLYWKDKSGD 61

Query: 135 MLDKML--QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQ---IELISPKI 189
            L + L         +     +   ++ PG+    ++           Q     L   ++
Sbjct: 62  RLREWLGVDEDTFYNSGYFAVLPMDFYFPGHGKSGDLPPRKDFADKWHQPILELLPDIEL 121

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIK 244
            + IG   + ++ +           +      P         VHP       + + P   
Sbjct: 122 TILIGQYAQKYYLHQKGNIKLTETVQHYQDYLPD----FFPLVHPSPRNQIWMAKNPWFA 177

Query: 245 KNTWHALITLKKAL 258
           +     L  L + +
Sbjct: 178 EQVVPDLQALVQKI 191


>gi|225868112|ref|YP_002744060.1| uracil DNA glycosylase superfamily protein [Streptococcus equi
           subsp. zooepidemicus]
 gi|225701388|emb|CAW98460.1| uracil DNA glycosylase superfamily protein [Streptococcus equi
           subsp. zooepidemicus]
          Length = 191

 Score = 43.6 bits (101), Expect = 0.030,   Method: Composition-based stats.
 Identities = 17/150 (11%), Positives = 47/150 (31%), Gaps = 12/150 (8%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   ++I+G  P      +   ++ ++G  L   L   +    Q  +  + P       
Sbjct: 29  PQTARIVIVGQAPGIVAQETRLYWNDRSGVRLRAWLGVDDRTFYQSGLFGVLPMDFYYPG 88

Query: 165 NLSNIEMEICRPIIMR-----QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
              + ++   +    +        +   ++++ +G   + ++     ++      +    
Sbjct: 89  KGKSGDLPPRKGFAAKWHGPLMALMPQVELVVLVGQYAQQYYLGKGCRRNLTETVQHFED 148

Query: 220 CTPHSIIPTLATVHPQELIQYPLI-KKNTW 248
             P         VHP    +  L   KN W
Sbjct: 149 YLPDY----FPLVHPSP--RNQLWLAKNAW 172


>gi|154247254|ref|YP_001418212.1| hypothetical protein Xaut_3326 [Xanthobacter autotrophicus Py2]
 gi|154161339|gb|ABS68555.1| conserved hypothetical protein [Xanthobacter autotrophicus Py2]
          Length = 225

 Score = 43.6 bits (101), Expect = 0.030,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 60/209 (28%), Gaps = 36/209 (17%)

Query: 73  KACSLHELKSLLRSFHDC-------HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISG 125
              +L  L + +R+   C        L       +         +++    P    + SG
Sbjct: 7   SDPALDALVARIRACRVCVEAPRGAPL-PHEPRPVLWVSDTAA-ILVASQAPGTKVHASG 64

Query: 126 KPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPII 178
           +PF+  +G+ L + +          ++I I+ +    P     G       E        
Sbjct: 65  RPFTDASGDRLRQWMGVSDDEFYDASRIAIAPMGFCFPGQDAAGGDLPPRRECAATWHDT 124

Query: 179 MRQIELISPKILLFIGNKTKNFFF------NNDAQKTYQNLGKWSNLCTPH----SIIPT 228
           +    L + +++L +G   + +         +      Q +  W  +          +  
Sbjct: 125 LF-ATLPAFRLILAVGRPAQAYHLARLGLRAHLKASLTQTVHHWREVRAAGMALAHPVAV 183

Query: 229 LATVHPQ-----ELIQYPLIKKNTWHALI 252
               HP       L + P         L+
Sbjct: 184 YTLPHPSWRNTGWLKRNP----FFEADLL 208


>gi|294790772|ref|ZP_06755930.1| uracil DNA glycosylase family protein [Scardovia inopinata F0304]
 gi|294458669|gb|EFG27022.1| uracil DNA glycosylase family protein [Scardovia inopinata F0304]
          Length = 235

 Score = 43.6 bits (101), Expect = 0.031,   Method: Composition-based stats.
 Identities = 24/182 (13%), Positives = 62/182 (34%), Gaps = 34/182 (18%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPW--- 158
            +   +++IG  P  +   S  P++ ++G+ L + +   ++      +I I  +  +   
Sbjct: 54  HQQARIVLIGQAPGRAAQDSMIPWNDRSGDRLRQWMGIDKNTFYQSDRIAIMNMDFYYPG 113

Query: 159 ---------------HPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
                              + +L        +   +   ++ + K++L IG      +  
Sbjct: 114 SKGDRRCADGAGKKPRKGPSSDLPPRSGFAEKWHPLLLEQMPNVKLILLIGFYAVRKYLG 173

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPT-LATVHPQELIQYPLIK-KNTW---HALITLKKAL 258
              +       + +++   +   P     VHP    +  +   KN W     L  LK+ +
Sbjct: 174 LRPKD------RLTDVVKDYQGNPLYFPLVHPSP--RNQIWMTKNPWFAGETLPLLKRRV 225

Query: 259 KN 260
           + 
Sbjct: 226 RQ 227


>gi|237744206|ref|ZP_04574687.1| uracil-DNA glycosylase [Fusobacterium sp. 7_1]
 gi|229431435|gb|EEO41647.1| uracil-DNA glycosylase [Fusobacterium sp. 7_1]
          Length = 197

 Score = 43.6 bits (101), Expect = 0.031,   Method: Composition-based stats.
 Identities = 19/167 (11%), Positives = 45/167 (26%), Gaps = 16/167 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   ++I+G  P      +   +  K+G+ L   +   E      ++  I P       
Sbjct: 35  PKEARIVIVGQAPGIKAQENRLYWKDKSGDKLRLWMGVDEKTFYSSNLLAIIPMDFYYPG 94

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFF-NNDAQKTYQNLGKWSN 218
                     +    +        L + ++ + IG   + F+            +  +  
Sbjct: 95  KGKSGDLPPRKDFGEKWHNKILELLPNVELFILIGKYAQGFYLKGKLKDNLTNTVHAYKE 154

Query: 219 LCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKN 260
                        VHP       L + P  ++     L  +   +  
Sbjct: 155 YLP-----KFFPIVHPSPLNIRWLKKNPWFEEEVVPKLKEMVTKIME 196


>gi|218507487|ref|ZP_03505365.1| DNA-directed DNA polymerase protein [Rhizobium etli Brasil 5]
          Length = 74

 Score = 43.6 bits (101), Expect = 0.031,   Method: Composition-based stats.
 Identities = 10/74 (13%), Positives = 21/74 (28%), Gaps = 10/74 (13%)

Query: 190 LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQ------YPLI 243
           ++ +G            + T +  G            P L T+HP  L++          
Sbjct: 2   VVALGATALYALLGPKVKLTPE-RGHILQPTNRP---PVLVTIHPSYLLRIRDEAERHRQ 57

Query: 244 KKNTWHALITLKKA 257
           ++     L    + 
Sbjct: 58  RRQFVSDLHKAAEF 71


>gi|325695867|gb|EGD37758.1| uracil DNA glycosylase [Streptococcus sanguinis SK160]
          Length = 194

 Score = 43.2 bits (100), Expect = 0.032,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 48/167 (28%), Gaps = 20/167 (11%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + I+G  P      +G  +  K+G+ L + L   E          + P       
Sbjct: 32  PKNARINIVGQAPGLKTQQAGLYWKDKSGDRLREWLGVDEETFYHSGYFAVLPMDFYFPG 91

Query: 165 NLSNIEMEICRPIIMRQIELISP--------KILLFIGNKTKNFFFNNDAQKTYQNLGKW 216
           +  + ++   +    R      P        ++ + IG   + ++ +           + 
Sbjct: 92  HGKSGDLPPRKGFAER---WHQPILELLPDIELTILIGQYAQKYYLHQKGNIKLTETVQH 148

Query: 217 SNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258
                P         VHP       + + P  +      L  L + +
Sbjct: 149 YQDYLPD----FFPLVHPSPRNQIWMAKNPWFEAEVVPELQALVQKI 191


>gi|256027678|ref|ZP_05441512.1| Uracil-DNA glycosylase [Fusobacterium sp. D11]
 gi|289765637|ref|ZP_06525015.1| uracil-DNA glycosylase [Fusobacterium sp. D11]
 gi|289717192|gb|EFD81204.1| uracil-DNA glycosylase [Fusobacterium sp. D11]
          Length = 197

 Score = 43.2 bits (100), Expect = 0.033,   Method: Composition-based stats.
 Identities = 19/168 (11%), Positives = 47/168 (27%), Gaps = 18/168 (10%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   ++I+G  P      +   +  K+G+ L   +   E      ++  I P       
Sbjct: 35  PKEARIVIVGQAPGIKAQENRLYWKDKSGDKLRLWMGVDEKTFYSSNLLAIIPMDFYYPG 94

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    +        L + ++ + IG   + F+     +         ++ 
Sbjct: 95  KGKSGDLPPRKDFGEKWHNKILELLPNVELFILIGKYAQGFYLKGKLKD------NLTDT 148

Query: 220 CTPHSII--PTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKN 260
              +          VHP       L + P  ++     L  +   +  
Sbjct: 149 VHAYKEYLPKFFPIVHPSPLNIRWLKKNPWFEEEVVPKLKEMVTKIME 196


>gi|78047880|ref|YP_364055.1| hypothetical protein XCV2324 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78036310|emb|CAJ24001.1| conserved hypothetical protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 185

 Score = 43.2 bits (100), Expect = 0.033,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 36/113 (31%), Gaps = 5/113 (4%)

Query: 52  PITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLC-STSLSTICATQTEGQDL 110
           P    R +  P         +   +L    + +R+   C       +  +         +
Sbjct: 3   PGYASRRMAPPSCASHPFRKRAMPTLDAFLTDVRACTRCAPHLPHGVQPVF-QFHPSAPI 61

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHP 160
           +I G  P    + SG PF   +G  L   L   +      T+I I  +   +P
Sbjct: 62  LIAGQAPGARVHASGVPFDDASGARLRAWLGVDRDTFYDPTRIAILPMGFCYP 114


>gi|203283943|ref|YP_002221683.1| hypothetical protein BDU_19 [Borrelia duttonii Ly]
 gi|203287486|ref|YP_002222501.1| hypothetical protein BRE_18 [Borrelia recurrentis A1]
 gi|201083386|gb|ACH92977.1| uncharacterized conserved protein [Borrelia duttonii Ly]
 gi|201084706|gb|ACH94280.1| uncharacterized conserved protein [Borrelia recurrentis A1]
          Length = 189

 Score = 43.2 bits (100), Expect = 0.034,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 34/103 (33%), Gaps = 7/103 (6%)

Query: 153 SMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQN 212
           +         + ++ N ++      ++ +I+   PK +L          F N   +    
Sbjct: 88  TNAIIKKWCESISILNYKIINNSNTLIAEIDNQQPKAILACEEVE---LFLNQNLRIQIV 144

Query: 213 LGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLK 255
            G           IP + T  P   I  P +KK  W  L  +K
Sbjct: 145 RG----FELKFKKIPIVFTHLPTSQISNPELKKEIWQDLKMIK 183


>gi|255327009|ref|ZP_05368085.1| uracil-DNA glycosylase [Rothia mucilaginosa ATCC 25296]
 gi|255296226|gb|EET75567.1| uracil-DNA glycosylase [Rothia mucilaginosa ATCC 25296]
          Length = 215

 Score = 43.2 bits (100), Expect = 0.037,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 46/140 (32%), Gaps = 9/140 (6%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
           +    +++IG  P  +   S  P++  +G  L + +   +       +  + P       
Sbjct: 48  SPHARIVVIGQAPGRAAQESRIPWNDPSGVKLREWMGVTDEQFYNPDLISLLPMDFYYPG 107

Query: 165 NLSNIEMEICRPI---IMRQIELISP--KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
             ++ +    +        Q+  + P  +++L +G  ++  +   D     +     +  
Sbjct: 108 KGAHGDNPPRKDFAPKWHPQLLELMPNVQLILLVGAYSQKHYL--DGMHAPKAQKNLTET 165

Query: 220 CTPHSII--PTLATVHPQEL 237
                      L  VHP  L
Sbjct: 166 VRAWESYLPKFLPLVHPSPL 185


>gi|289168409|ref|YP_003446678.1| uracil-DNA glycosylase [Streptococcus mitis B6]
 gi|288907976|emb|CBJ22816.1| uracil-DNA glycosylase [Streptococcus mitis B6]
          Length = 192

 Score = 43.2 bits (100), Expect = 0.041,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 46/165 (27%), Gaps = 15/165 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPP 161
            +   + IIG  P      +G  +  K+G+ L   L   +          +  +  + P 
Sbjct: 32  PKTARINIIGQAPGLKTQEAGLYWKDKSGDRLRDWLGVDEDTFYNSGYFAVLPMDFYFPG 91

Query: 162 GNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
             ++               Q+    P  ++ L IG   + ++             K    
Sbjct: 92  HGKSGDLPPRADFAEKWHPQLLKELPDIQLTLLIGQYAQAYYLQEKVSGKVTERVKHYQN 151

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKAL 258
             P         VHP       + + P  +      L   +K  L
Sbjct: 152 YLPTY----FPLVHPSPRNQIWMAKNPWFESEVVPDLKKRIKTIL 192


>gi|283457723|ref|YP_003362310.1| uracil-DNA glycosylase [Rothia mucilaginosa DY-18]
 gi|283133725|dbj|BAI64490.1| uracil-DNA glycosylase [Rothia mucilaginosa DY-18]
          Length = 233

 Score = 43.2 bits (100), Expect = 0.041,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 46/140 (32%), Gaps = 9/140 (6%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
           +    +++IG  P  +   S  P++  +G  L + +   +       +  + P       
Sbjct: 66  SPHARIVVIGQAPGRAAQESRIPWNDPSGVKLREWMGVTDEQFYDPDLISLLPMDFYYPG 125

Query: 165 NLSNIEMEICRPI---IMRQIELISP--KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
             ++ +    +        Q+  + P  +++L +G  ++  +   D     +     +  
Sbjct: 126 KGAHGDNPPRKDFAPKWHPQLLELMPDVQLILLVGAYSQKHYL--DGVHAPKAQKNLTET 183

Query: 220 CTPHSII--PTLATVHPQEL 237
                      L  VHP  L
Sbjct: 184 VRAWESYLPKFLPLVHPSPL 203


>gi|306829087|ref|ZP_07462277.1| uracil-DNA glycosylase [Streptococcus mitis ATCC 6249]
 gi|304428173|gb|EFM31263.1| uracil-DNA glycosylase [Streptococcus mitis ATCC 6249]
          Length = 194

 Score = 42.8 bits (99), Expect = 0.048,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 52/167 (31%), Gaps = 20/167 (11%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159
            +   + I+G  P      +G  +  K+GN L + L   +          +  +  +   
Sbjct: 32  PKTARINIVGQAPGFKTQEAGIYWKDKSGNRLREWLGVDEDTFYNSGYFAVLPMDFYFPG 91

Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS-N 218
              + +L   +    +       E  + ++ L IG   + ++ +           K   +
Sbjct: 92  HGKSGDLPPRKGFAEKWHPQLLKECPNIELTLLIGQYAQAYYLHERISGKVTERVKHYKD 151

Query: 219 LCTPHSIIPTLATVHPQELIQYPLIK-KNTWH------ALITLKKAL 258
               +        VHP    +  +   KNTW        L  L + +
Sbjct: 152 YLPEY-----FPLVHPSP--RNQIWMAKNTWFESEVVPDLKALVQKI 191


>gi|16330695|ref|NP_441423.1| hypothetical protein sll1217 [Synechocystis sp. PCC 6803]
 gi|1653187|dbj|BAA18103.1| sll1217 [Synechocystis sp. PCC 6803]
          Length = 225

 Score = 42.8 bits (99), Expect = 0.049,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 58/192 (30%), Gaps = 35/192 (18%)

Query: 99  TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMR----------- 147
            +      G  L   G      +   G+P  G  G ++ K        R           
Sbjct: 38  ILFG-GNLGSQLCFFGRDLGADEVRQGQPLIGAAGRLVRKGFFEAWQGRVPRGQDDLQTV 96

Query: 148 -TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS-PKILLFIGNKTKNFFF--- 202
             +I ++   P+ PP N+  S    E  RP + + +      K ++ +G +   +F    
Sbjct: 97  CQRILLTNTVPYKPPENKAYSVKVKERFRPFVEQLLVFHWQGKQIITLGTEAFKWFAPYA 156

Query: 203 -----------NNDAQKTYQNLGKWSNLCTPH--SIIPTLATVHPQELIQYPLIKKNTWH 249
                       +  + +   L K           I+  +   HP      PL K+    
Sbjct: 157 PKGQLDEFFQGGDRYECSLDVLIKAKTAAGKGSQKIVRLMPLPHPS-----PLNKRYYGQ 211

Query: 250 ALITLKKALKNL 261
               L++ L  +
Sbjct: 212 FPTMLQRRLTEI 223


>gi|294786600|ref|ZP_06751854.1| uracil DNA glycosylase family protein [Parascardovia denticolens
           F0305]
 gi|315226187|ref|ZP_07867975.1| uracil DNA glycosylase [Parascardovia denticolens DSM 10105]
 gi|294485433|gb|EFG33067.1| uracil DNA glycosylase family protein [Parascardovia denticolens
           F0305]
 gi|315120319|gb|EFT83451.1| uracil DNA glycosylase [Parascardovia denticolens DSM 10105]
          Length = 196

 Score = 42.8 bits (99), Expect = 0.051,   Method: Composition-based stats.
 Identities = 19/167 (11%), Positives = 50/167 (29%), Gaps = 15/167 (8%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML--QSIEIMRTQIHISMISPWHPPG 162
            +   L+IIG  P      + + ++  +G+ L + +         +     M   ++ PG
Sbjct: 33  NQQARLVIIGQAPGRIAQETRQTWNDHSGDKLREWMGVDRETFYTSPCIAIMPMDFYFPG 92

Query: 163 NRNL---SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                          +        +   ++ L +G    + + +        ++ +  + 
Sbjct: 93  AGKSGDLPPRPGFAEKWHPRLLKLMPKIELSLLVGTYAVHAYLHQKNSVKLTDIIRDYDR 152

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKALKN 260
             P      +   HP       L + P  ++     L   ++  L  
Sbjct: 153 YLPE----FMPLAHPSWHNQLWLKKNPWYQEEVIPLLQERIRGILNE 195


>gi|149378423|ref|ZP_01896118.1| hypothetical protein MDG893_00015 [Marinobacter algicola DG893]
 gi|149357288|gb|EDM45815.1| hypothetical protein MDG893_00015 [Marinobacter algicola DG893]
          Length = 129

 Score = 42.8 bits (99), Expect = 0.053,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 47/130 (36%), Gaps = 9/130 (6%)

Query: 76  SLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNM 135
           S  EL + +R    C              ++   L+++G  P    + +G PF+  +G+ 
Sbjct: 2   SFDELVAHVRRCRICEAHLPLEPRPVVQVSQSARLLVVGQAPGRRVHDTGLPFNDPSGDR 61

Query: 136 LDKML---QSIEIMRTQIHISMISPWHP----PGNRNLSNIEMEICRPIIMRQIELISPK 188
           L + +   +       Q+ I  +   +P     G+           R +++ ++E +   
Sbjct: 62  LREWMGVDRDTFYDDQQLAILPMGFCYPGTGKSGDLPPRPECAPAWRDLLLERLEAVQL- 120

Query: 189 ILLFIGNKTK 198
             L IG    
Sbjct: 121 -TLVIGQYAH 129


>gi|329888117|ref|ZP_08266715.1| uracil-DNA glycosylase superfamily protein [Brevundimonas diminuta
           ATCC 11568]
 gi|328846673|gb|EGF96235.1| uracil-DNA glycosylase superfamily protein [Brevundimonas diminuta
           ATCC 11568]
          Length = 167

 Score = 42.4 bits (98), Expect = 0.058,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 47/151 (31%), Gaps = 15/151 (9%)

Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPG 162
               L+I G  P    + SG PF+  +G  L   +   ++      ++ ++  +   P  
Sbjct: 6   PETRLLICGQAPGRRVHESGLPFTDPSGVRLRDWMGVDEATFYGDPRLGVAAQAFCFPGT 65

Query: 163 NRNLSNI-EMEICRPIIMRQIELISPKILLFI---GNKTKNFFFNNDAQKTYQNLGKWSN 218
           +    +      C  +   ++    PK+ L +   G                + +  W +
Sbjct: 66  DPKGGDYPPPRRCAELWRPRLLAELPKVELTLLVGGYAQAWALGAAAKANMTETVHAWRD 125

Query: 219 LCTPHSIIPTLATVHPQELIQYPLI-KKNTW 248
                     L   HP    +     KKN W
Sbjct: 126 YAPA-----ILPLPHPSW--RNTAWLKKNPW 149


>gi|145589100|ref|YP_001155697.1| hypothetical protein Pnuc_0917 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145047506|gb|ABP34133.1| hypothetical protein Pnuc_0917 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 179

 Score = 42.4 bits (98), Expect = 0.059,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 25/76 (32%), Gaps = 2/76 (2%)

Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP-HSIIPTLATVHPQELIQYPLIKK 245
           P +    G  +             Q       L T     IP +A+    +++  P  K 
Sbjct: 105 PLVAFAFGGPSTQKITGERDPLP-QLRETVLALNTGTDDDIPVIASFDLTQVVASPKDKA 163

Query: 246 NTWHALITLKKALKNL 261
             W  L+  K  L+N+
Sbjct: 164 FLWQDLLLAKSVLQNI 179


>gi|317496513|ref|ZP_07954862.1| uracil DNA glycosylase superfamily protein [Gemella moribillum
           M424]
 gi|316913316|gb|EFV34813.1| uracil DNA glycosylase superfamily protein [Gemella moribillum
           M424]
          Length = 156

 Score = 42.4 bits (98), Expect = 0.061,   Method: Composition-based stats.
 Identities = 17/133 (12%), Positives = 41/133 (30%), Gaps = 11/133 (8%)

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL---- 166
           MIIG  P      S   F+ K+G  L + +     +     +  + P             
Sbjct: 1   MIIGQAPGLKAQESKIFFNDKSGVKLREWMGIDNEIFYNSGLIGVVPMDFYYPGKGKSGD 60

Query: 167 -SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNN-DAQKTYQNLGKWSNLCTPHS 224
               +    R        +   ++++ +G   ++++  +   +   + +  +      + 
Sbjct: 61  LPPRKNFASRWHAKVLELMPDVELIILVGKYAQDYYLKDGKGKNLTETVKNYKKYLPTY- 119

Query: 225 IIPTLATVHPQEL 237
                  VHP  L
Sbjct: 120 ----FPIVHPSPL 128


>gi|227508150|ref|ZP_03938199.1| uracil-DNA glycosylase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227192379|gb|EEI72446.1| uracil-DNA glycosylase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 193

 Score = 42.4 bits (98), Expect = 0.061,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 44/137 (32%), Gaps = 9/137 (6%)

Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPG 162
               ++II   PS     S   ++  +G+ L   +   +       +I +  +  ++P  
Sbjct: 33  PNAKILIISQAPSRKAQESMVFWNDPSGDRLRDWMGIDKDRFYHSGKIAVMPLDFYYPGK 92

Query: 163 NRNL--SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220
             +      +    +        + + ++ L IG   + ++   + QK      +     
Sbjct: 93  GIHGDLPPRKGFADKWHQPLLSLMPNVQLKLLIGQYAQKYYLQKNRQKNLTETVRCFEDY 152

Query: 221 TPHSIIPTLATVHPQEL 237
            P         VHP  L
Sbjct: 153 LPEY----FPLVHPSPL 165


>gi|322385597|ref|ZP_08059241.1| uracil DNA glycosylase [Streptococcus cristatus ATCC 51100]
 gi|321270335|gb|EFX53251.1| uracil DNA glycosylase [Streptococcus cristatus ATCC 51100]
          Length = 208

 Score = 42.4 bits (98), Expect = 0.063,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 50/167 (29%), Gaps = 20/167 (11%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + I+G  P      +G  +  K+G+ L + L   E    Q     + P       
Sbjct: 46  PKNARINIVGQAPGLKTQQAGLYWKDKSGDRLREWLGVDEETFYQSGYFAVLPMDFYFPG 105

Query: 165 NLSNIEMEICRPIIMRQIELISP--------KILLFIGNKTKNFFFNNDAQKTYQNLGKW 216
           +  + ++   +  + +      P        ++ + IG   + ++ +           + 
Sbjct: 106 HGKSGDLPPRKGFVEK---WHQPILELLPDIELTILIGQYAQKYYLHQKGNVKLTETVQH 162

Query: 217 SNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258
                P         VHP       + + P  +      L  L + +
Sbjct: 163 YQDYLPD----FFPLVHPSPRNQIWMAKNPWFEAEVVPELQALVQKI 205


>gi|169235608|ref|YP_001688808.1| hypothetical protein OE2052F [Halobacterium salinarum R1]
 gi|167726674|emb|CAP13460.1| conserved hypothetical protein [Halobacterium salinarum R1]
          Length = 212

 Score = 42.4 bits (98), Expect = 0.064,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 38/121 (31%), Gaps = 16/121 (13%)

Query: 96  SLSTICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQSIEI-------- 145
             S +        D+ +IG  P       +G PF+G   G+ L   L+   +        
Sbjct: 18  CESFVPGHGDANADIHVIGDHPGVHGGTDTGTPFTGSAAGDRLRSALRDAGVLTTAADDT 77

Query: 146 ----MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
                      S + P  P G    +  +     P    ++  I+  +LL +G +     
Sbjct: 78  PPIDDPDNSFFSYLHPCVPEGT--PTPADYRELEPFFDAELRAITAHVLLPVGERATTHV 135

Query: 202 F 202
            
Sbjct: 136 L 136


>gi|168013759|gb|ACA14446.1| hypothetical protein JK011 [Enterobacter cloacae]
 gi|190683017|gb|ACE81799.1| hypothetical protein JK011 [Enterobacter cloacae]
          Length = 176

 Score = 42.0 bits (97), Expect = 0.074,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 33/105 (31%), Gaps = 5/105 (4%)

Query: 60  HSPLVQQADSIAQKACSLHELKSLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTPS 118
             P         +   +L    + +R+   C       +  +         ++I G  P 
Sbjct: 2   APPSCASHPFRKRAMPTLDAFLTDVRACTRCAPHLPHGVQPVF-QFHPSAPILIAGQAPG 60

Query: 119 DSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHP 160
              + SG PF   +G  L   L   +      T+I I  +   +P
Sbjct: 61  ARVHASGVPFDDASGARLRAWLGVDRDTFYDPTRIAILPMGFCYP 105


>gi|254302889|ref|ZP_04970247.1| hypothetical protein FNP_0523 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148323081|gb|EDK88331.1| hypothetical protein FNP_0523 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 197

 Score = 42.0 bits (97), Expect = 0.074,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 46/152 (30%), Gaps = 16/152 (10%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   ++I+G  P      +   +  K+G+ L       E      ++  I P       
Sbjct: 35  PKEARIVIVGQAPGIKAQENKLYWKDKSGDKLRVWTGIDEKTFYNSNLLAIIPMDFYYPG 94

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    +        L + ++ + IG   + F+     +         ++ 
Sbjct: 95  KGKNGDLPPRKDFGDKWHNKILELLPNIELFILIGKYAQGFYLKGKLKD------NLTDT 148

Query: 220 CTPHSII--PTLATVHPQEL-IQYPLIKKNTW 248
              +          VHP  L I+   +KKN W
Sbjct: 149 VKAYKEYLPKFFPIVHPSPLNIR--WLKKNPW 178


>gi|332359622|gb|EGJ37439.1| uracil DNA glycosylase [Streptococcus sanguinis SK355]
          Length = 194

 Score = 42.0 bits (97), Expect = 0.075,   Method: Composition-based stats.
 Identities = 22/169 (13%), Positives = 45/169 (26%), Gaps = 20/169 (11%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
                + I+G  P      +G  +  K+G  L K L   E          + P       
Sbjct: 32  PRNARINIVGQAPGLKTQEAGLYWKDKSGERLRKWLGVDEETFYNSGYFAVLPMDFYFPG 91

Query: 165 NLSNIEMEICRPIIMRQIELISP--------KILLFIGNKTKNFFFNNDAQKTYQNLGKW 216
           +  + ++   +    +      P        ++ + IG   + ++ +           + 
Sbjct: 92  HGKSGDLPPRKGFADK---WHQPILELLPDIELTILIGQYAQKYYLHQKGNIKLTETVQH 148

Query: 217 SNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKN 260
                P         VHP       + + P         L  L K +  
Sbjct: 149 YQDYLPD----FFPLVHPSPRNQIWMAKNPWFAAQVVPDLQKLVKNIME 193


>gi|312866643|ref|ZP_07726857.1| uracil-DNA glycosylase family protein [Streptococcus parasanguinis
           F0405]
 gi|311097724|gb|EFQ55954.1| uracil-DNA glycosylase family protein [Streptococcus parasanguinis
           F0405]
          Length = 194

 Score = 42.0 bits (97), Expect = 0.077,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 53/168 (31%), Gaps = 22/168 (13%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + IIG  P      +G  +  K+G+ L + L   E       +  + P       
Sbjct: 32  PKTARINIIGQAPGLKTQEAGIYWKDKSGDRLREWLGVDEDTFYNSGLFAVIPMDFYFPG 91

Query: 165 NLSNIEMEICRPI---IMRQIELISP--KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
           +  + ++   +        Q+    P  ++ L IG   + ++ +          GK +  
Sbjct: 92  HGKSGDLPPRKGFAEKWHPQLLKECPDIELTLLIGQYAQAYYLHEKVS------GKVTER 145

Query: 220 CTPHSIIPTLATV----HPQ-----ELIQYPLIKKNTWHALITLKKAL 258
                    L T     HP       + + P  +      L TL + +
Sbjct: 146 VHHFKDY--LPTYFPLVHPSPRNQIWMAKNPWFEAEVVPELQTLVQEI 191


>gi|113970849|ref|YP_734642.1| phage SPO1 DNA polymerase domain-containing protein [Shewanella sp.
           MR-4]
 gi|113885533|gb|ABI39585.1| phage SPO1 DNA polymerase domain protein [Shewanella sp. MR-4]
          Length = 240

 Score = 42.0 bits (97), Expect = 0.079,   Method: Composition-based stats.
 Identities = 32/231 (13%), Positives = 61/231 (26%), Gaps = 44/231 (19%)

Query: 70  IAQKACSLHELKSLLRSFHDCHLCST-----SLSTICATQTEGQDLMIIGYTPSDSDNIS 124
            A +     EL  LL+    C LC       +   + A  +    ++I G  P    +  
Sbjct: 8   PAIEPNGSAELSILLKQIRACQLCQGELPLPAKPILQA--SSQARILIAGQAPGVKTHHK 65

Query: 125 GKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEME-------IC 174
           G PF   +G  L   L   +          I  +    P         + +         
Sbjct: 66  GIPFDDASGERLRAWLNVSREQFYDPALFAIVPMGFCFPGTIERNGKKQGDKPPRPECAA 125

Query: 175 RPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY-----QNLGKWSNLCTPHSIIPT- 228
                    +   +++L +G    ++                +     +    +  I   
Sbjct: 126 TWHAKLLALMPQIELVLVLGQYAIDYHLPRTRAIDTTDEALSSQAIVVSTPQTNKKITVT 185

Query: 229 -------------LATVHPQ-----ELIQYPLIKKNTWHALITLKKALKNL 261
                        +   HP       L Q+P  ++     L TL+  +  L
Sbjct: 186 QAIEQWSLYWPRLMVMPHPSPRNNLWLKQHPEFER---EQLPTLQARIAGL 233


>gi|296876343|ref|ZP_06900395.1| uracil-DNA glycosylase [Streptococcus parasanguinis ATCC 15912]
 gi|296432633|gb|EFH18428.1| uracil-DNA glycosylase [Streptococcus parasanguinis ATCC 15912]
          Length = 194

 Score = 42.0 bits (97), Expect = 0.079,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 53/168 (31%), Gaps = 22/168 (13%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + IIG  P      +G  +  K+G+ L + L   E       +  + P       
Sbjct: 32  PKTARINIIGQAPGLKTQEAGIYWKDKSGDRLREWLGVDEDTFYNSGLFAVIPMDFYFPG 91

Query: 165 NLSNIEMEICRPI---IMRQIELISP--KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
           +  + ++   +        Q+    P  ++ L IG   + ++ +          GK +  
Sbjct: 92  HGKSGDLPPRKGFAEKWHPQLLKECPDIELTLLIGQYAQAYYLHEKVS------GKVTER 145

Query: 220 CTPHSIIPTLATV----HPQ-----ELIQYPLIKKNTWHALITLKKAL 258
                    L T     HP       + + P  +      L TL + +
Sbjct: 146 VHHFKDY--LPTYFPLVHPSPRNQIWMAKNPWFEAEVVPELQTLVQEI 191


>gi|15789887|ref|NP_279711.1| hypothetical protein VNG0707C [Halobacterium sp. NRC-1]
 gi|10580289|gb|AAG19191.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
          Length = 199

 Score = 42.0 bits (97), Expect = 0.080,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 38/121 (31%), Gaps = 16/121 (13%)

Query: 96  SLSTICATQTEGQDLMIIGYTPSDS-DNISGKPFSG-KTGNMLDKMLQSIEI-------- 145
             S +        D+ +IG  P       +G PF+G   G+ L   L+   +        
Sbjct: 5   CESFVPGHGDANADIHVIGDHPGVHGGTDTGTPFTGSAAGDRLRSALRDAGVLTTAADDT 64

Query: 146 ----MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFF 201
                      S + P  P G    +  +     P    ++  I+  +LL +G +     
Sbjct: 65  PPIDDPDNSFFSYLHPCVPEGT--PTPADYRELEPFFDAELRAITAHVLLPVGERATTHV 122

Query: 202 F 202
            
Sbjct: 123 L 123


>gi|223932532|ref|ZP_03624533.1| Uracil-DNA glycosylase superfamily [Streptococcus suis 89/1591]
 gi|302024158|ref|ZP_07249369.1| uracil DNA glycosylase superfamily protein [Streptococcus suis
           05HAS68]
 gi|330833112|ref|YP_004401937.1| Uracil-DNA glycosylase superfamily [Streptococcus suis ST3]
 gi|223898803|gb|EEF65163.1| Uracil-DNA glycosylase superfamily [Streptococcus suis 89/1591]
 gi|329307335|gb|AEB81751.1| Uracil-DNA glycosylase superfamily [Streptococcus suis ST3]
          Length = 192

 Score = 42.0 bits (97), Expect = 0.080,   Method: Composition-based stats.
 Identities = 18/136 (13%), Positives = 45/136 (33%), Gaps = 10/136 (7%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPP 161
                ++IIG  P       G+ F   +GN L + L   +          I  +  ++P 
Sbjct: 31  PSTAKILIIGQAPGLKTQEKGRLFDDASGNNLRQWLGVDRQTFYESGHFAILPMDFYYPG 90

Query: 162 GNR--NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
             +  +L   +    +   +   +L   ++ + +GN  + ++     +   + +    + 
Sbjct: 91  KGKSGDLPPRKDFAPKWHPLIMKQLPQIELTILVGNYAQTYYLEKSQRNLTERVKHADDY 150

Query: 220 CTPHSIIPTLATVHPQ 235
              +         HP 
Sbjct: 151 LPKY-----FPLPHPS 161


>gi|148998297|ref|ZP_01825766.1| hypothetical protein CGSSp11BS70_03816 [Streptococcus pneumoniae
           SP11-BS70]
 gi|168576477|ref|ZP_02722351.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae
           MLV-016]
 gi|307067239|ref|YP_003876205.1| hypothetical protein SPAP_0610 [Streptococcus pneumoniae AP200]
 gi|147755940|gb|EDK62984.1| hypothetical protein CGSSp11BS70_03816 [Streptococcus pneumoniae
           SP11-BS70]
 gi|183577700|gb|EDT98228.1| uracil DNA glycosylase family protein [Streptococcus pneumoniae
           MLV-016]
 gi|306408776|gb|ADM84203.1| hypothetical protein SPAP_0610 [Streptococcus pneumoniae AP200]
          Length = 192

 Score = 42.0 bits (97), Expect = 0.085,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 46/165 (27%), Gaps = 15/165 (9%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159
            +   + IIG  P      +G  +  K+G+ L   L   +          +  +  +   
Sbjct: 32  PKTARINIIGQAPGLKTQEAGLYWKDKSGDRLRDWLGVDEDTFYNSGYFAVLPMDFYFPG 91

Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
              + +L        +       EL   ++ L IG   + ++             K    
Sbjct: 92  HGKSGDLPPRTGFAEKWHPQLLQELPDIQLTLLIGQYAQAYYLQEKISGKVTERVKHYKD 151

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKAL 258
             P   +      HP       + + P  +      L   +K  L
Sbjct: 152 YLPAYFLLV----HPSPRNQIWMAKNPWFEAEVVPDLKKRIKTIL 192


>gi|257054035|ref|YP_003131868.1| hypothetical protein Huta_2974 [Halorhabdus utahensis DSM 12940]
 gi|256692798|gb|ACV13135.1| conserved hypothetical protein [Halorhabdus utahensis DSM 12940]
          Length = 217

 Score = 42.0 bits (97), Expect = 0.086,   Method: Composition-based stats.
 Identities = 19/147 (12%), Positives = 38/147 (25%), Gaps = 10/147 (6%)

Query: 98  STICATQTEGQDLMIIGYTPSDS-DNISGKPFSGKTG-NMLDKMLQSIEIMRTQIHISMI 155
             +        D  IIG  P       +  PF+   G   L   L    ++R       +
Sbjct: 29  RFVPGFGDVEADFQIIGDHPGIHGGVTTSVPFTETDGAKRLQDALLQGGLLRKAGAPPTV 88

Query: 156 SPWHPPGNRNLSNI------EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT 209
              +                +       +  ++  I+  +LL +G +   +   N   + 
Sbjct: 89  DSTYLSYLHPSVPEQAPTDDDYTREETFVEAEVRAIAAHVLLPVGERATRWVLENMTTEP 148

Query: 210 YQNL--GKWSNLCTPHSIIPTLATVHP 234
             +L            S    +    P
Sbjct: 149 SDDLDMAALHGREIVGSGWLVVPIADP 175


>gi|259418274|ref|ZP_05742192.1| alpha-glucosidase [Silicibacter sp. TrichCH4B]
 gi|259345669|gb|EEW57513.1| alpha-glucosidase [Silicibacter sp. TrichCH4B]
          Length = 550

 Score = 42.0 bits (97), Expect = 0.090,   Method: Composition-based stats.
 Identities = 25/234 (10%), Positives = 56/234 (23%), Gaps = 32/234 (13%)

Query: 1   MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPIT 54
           + S+  L+      Q+ +L    F+ + GV     +  N   ++ + +        Q  +
Sbjct: 179 LVSQPDLNFHCDAVQDALLDATRFWLERGVDGFRLDTINFYMHDKELRSNPALPKDQRNS 238

Query: 55  NIRHIHSP-LVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113
           NI    +P   Q+      +  +L  L        +      + + +       + L I+
Sbjct: 239 NIAPSVNPYNHQEHLYSKNQPENLEFLARFRALLDEYP----AKTAVGEVGDAQRGLEIL 294

Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173
           G              +G TG  +    + +                              
Sbjct: 295 GQ-----------YTAGNTGVHMCYAFEFLAKDPLIAARVAEVFAKVDNVAADGWACWAF 343

Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227
               + R +   +                   A       G           +P
Sbjct: 344 SNHDVQRHVSRWNLS----------EAALRLHATLIMCLRGSVCIYQGEELGLP 387


>gi|254474084|ref|ZP_05087476.1| alpha-glucosidase protein [Pseudovibrio sp. JE062]
 gi|211956780|gb|EEA91988.1| alpha-glucosidase protein [Pseudovibrio sp. JE062]
          Length = 554

 Score = 42.0 bits (97), Expect = 0.091,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 38/105 (36%), Gaps = 6/105 (5%)

Query: 9   QEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQAD 68
           Q+ +L  A F+   GV     +  N   ++ Q ++         + ++  ++    Q   
Sbjct: 196 QQAVLDAARFWLKLGVDGFRLDTVNFYVHDKQLRDNPPYPDPDSLADVTGVNPYAFQDHK 255

Query: 69  SIAQKACSLHELKSLLRSFHDCHLCSTSLSTI--CATQTEGQDLM 111
               +  +L  L+ L    ++      + +T+       E  ++M
Sbjct: 256 FDKSQPENLKFLERLREVMNEFP----NTTTVGEIGAGHEASEIM 296


>gi|294785178|ref|ZP_06750466.1| uracil DNA glycosylase family protein [Fusobacterium sp. 3_1_27]
 gi|294486892|gb|EFG34254.1| uracil DNA glycosylase family protein [Fusobacterium sp. 3_1_27]
          Length = 197

 Score = 42.0 bits (97), Expect = 0.091,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 45/155 (29%), Gaps = 17/155 (10%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            E   ++I+G  P      +   +  K+G+ L       E      ++  I P       
Sbjct: 35  PEKARIVIVGQAPGLKAQENRLYWKDKSGDKLRIWTGIDEKTFYSSNLLAIIPMDFYYPG 94

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    +        L   ++ + IG   + F+     +         ++ 
Sbjct: 95  KGKNGDLPPRKDFGDKWHNKILELLPDVELFILIGKYAQGFYLKGKLKD------NLTDT 148

Query: 220 CTPHSII--PTLATVHPQEL-IQYPLIKKNTW-HA 250
              +          VHP  L I+   +KKN W   
Sbjct: 149 VRAYKEYLPKFFPIVHPSPLNIR--WLKKNPWFED 181


>gi|237742254|ref|ZP_04572735.1| uracil-DNA glycosylase [Fusobacterium sp. 4_1_13]
 gi|229429902|gb|EEO40114.1| uracil-DNA glycosylase [Fusobacterium sp. 4_1_13]
          Length = 197

 Score = 42.0 bits (97), Expect = 0.091,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 45/155 (29%), Gaps = 17/155 (10%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            E   ++I+G  P      +   +  K+G+ L       E      ++  I P       
Sbjct: 35  PEKARIVIVGQAPGLKAQENRLYWKDKSGDKLRIWTGIDEKTFYSSNLLAIIPMDFYYPG 94

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                     +    +        L   ++ + IG   + F+     +         ++ 
Sbjct: 95  KGKSGDLPPRKDFGDKWHNKILELLPDVELFILIGKYAQGFYLKGKLKD------NLTDT 148

Query: 220 CTPHSII--PTLATVHPQEL-IQYPLIKKNTW-HA 250
              +          VHP  L I+   +KKN W   
Sbjct: 149 VRAYKEYLPKFFPIVHPSPLNIR--WLKKNPWFED 181


>gi|99078280|ref|YP_611538.1| alpha amylase, catalytic region [Ruegeria sp. TM1040]
 gi|99035418|gb|ABF62276.1| alpha amylase catalytic region [Ruegeria sp. TM1040]
          Length = 550

 Score = 41.7 bits (96), Expect = 0.10,   Method: Composition-based stats.
 Identities = 23/234 (9%), Positives = 56/234 (23%), Gaps = 32/234 (13%)

Query: 1   MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPIT 54
           + S+  L+      Q  +L +  F+ + GV     +  N   ++ + +        Q   
Sbjct: 179 LVSQPDLNFHCPDVQNALLDVTRFWLERGVDGFRLDTINFYIHDKELRSNPALPKDQRNA 238

Query: 55  NIRHIHSP-LVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113
           NI    +P   Q+      +  +L  L        +      + + +       + L ++
Sbjct: 239 NIAPSVNPYNHQEHLYSKNQPENLDFLARFRALLDEYP----AKTAVGEVGDAQRGLELL 294

Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173
           G              +G TG  +    + +                              
Sbjct: 295 GQ-----------YTAGNTGVHMCYAFEFLAKDPLTAARVAEVFERTDEVAADGWACWAF 343

Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227
               + R +          + +       +          G           +P
Sbjct: 344 SNHDVQRHVSR------WGLSDAALR--LHATLIMC--LRGSVCIYQGEELGLP 387


>gi|119358012|ref|YP_912656.1| uracil-DNA glycosylase superfamily protein [Chlorobium
           phaeobacteroides DSM 266]
 gi|119355361|gb|ABL66232.1| Uracil-DNA glycosylase superfamily [Chlorobium phaeobacteroides DSM
           266]
          Length = 326

 Score = 41.7 bits (96), Expect = 0.10,   Method: Composition-based stats.
 Identities = 20/166 (12%), Positives = 40/166 (24%), Gaps = 16/166 (9%)

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ---SIEIMRTQIHISMISP 157
                    ++ +   P      SG               +   +  + R       I P
Sbjct: 53  PLDGGINAQVLFLLEAPGPKAVASGFVSRDNPDETAKNFFELNIAAGLDRAATVCWNIVP 112

Query: 158 WHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWS 217
           W+      +     +       RQ      ++L  +            A           
Sbjct: 113 WYIGTGTKIRAAHHDDI-----RQAREGLERLLALLPRIRVVALVGKKAASIES------ 161

Query: 218 NLCTPHSIIPTLATVHPQ--ELIQYPLIKKNTWHALITLKKALKNL 261
            +      +    T HP    + + P  +   ++AL  +   LK L
Sbjct: 162 EILLMLPGVKVFTTPHPSPQFINRLPENRTILFYALTCISDELKEL 207


>gi|114048074|ref|YP_738624.1| phage SPO1 DNA polymerase domain-containing protein [Shewanella sp.
           MR-7]
 gi|113889516|gb|ABI43567.1| phage SPO1 DNA polymerase domain protein [Shewanella sp. MR-7]
          Length = 240

 Score = 41.7 bits (96), Expect = 0.10,   Method: Composition-based stats.
 Identities = 32/231 (13%), Positives = 61/231 (26%), Gaps = 44/231 (19%)

Query: 70  IAQKACSLHELKSLLRSFHDCHLCST-----SLSTICATQTEGQDLMIIGYTPSDSDNIS 124
            A +     EL  LL+    C LC       +   + A  +    ++I G  P    +  
Sbjct: 8   PAIEPNGSAELSVLLKQIRACQLCQAELPLPAKPILQA--SSQARILIAGQAPGVKTHHK 65

Query: 125 GKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEME-------IC 174
           G PF   +G  L   L   +          I  +    P         + +         
Sbjct: 66  GIPFDDASGERLRAWLNVSREQFYDPALFAIVPMGFCFPGTIERNGKKQGDKPPRPECAA 125

Query: 175 RPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTY-----QNLGKWSNLCTPHSIIPT- 228
                    +   +++L +G    ++                +     +    +  I   
Sbjct: 126 TWHTKLLALMPQIELVLVLGQYAIDYHLPRTRAIDTTDDALSSQAITISTPQTNKKITVT 185

Query: 229 -------------LATVHPQ-----ELIQYPLIKKNTWHALITLKKALKNL 261
                        +   HP       L Q+P  ++     L TL+  +  L
Sbjct: 186 QAIEQWSLYWPRLMVMPHPSPRNNLWLKQHPEFER---EQLPTLQARIAGL 233


>gi|319938793|ref|ZP_08013157.1| uracil DNA glycosylase [Streptococcus anginosus 1_2_62CV]
 gi|319811843|gb|EFW08109.1| uracil DNA glycosylase [Streptococcus anginosus 1_2_62CV]
          Length = 194

 Score = 41.7 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/191 (10%), Positives = 56/191 (29%), Gaps = 18/191 (9%)

Query: 75  CSLHELKSLL-RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
            +L ++K  +     +       +  + A   +   + I+G  P      +   ++ K+G
Sbjct: 2   ETLEDIKKAIMADSQNQAYTKRGIEPLFAA-PKTARINIVGQAPGIRAQETRLYWNDKSG 60

Query: 134 NMLDKMLQSIEIMRTQIHISMISP--WHPPGNRNLSNIEMEICRPIIMRQIE---LISPK 188
           + L + +                P  ++ PG+    ++           Q     L   +
Sbjct: 61  DRLREWMGVDYDTFYHSGYFAAIPMDFYFPGHGKSGDLPPRKGFAEKWHQPILDLLPDLE 120

Query: 189 ILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPL 242
           + + IG   + ++ +          +  + +             VHP       + + P 
Sbjct: 121 LTVLIGQYAQKYYLHQKGTVKLTDTVKHYQDYLPEF-----FPLVHPSPRNQIWMAKNPW 175

Query: 243 IKKNTWHALIT 253
             +     L  
Sbjct: 176 FAETVIPDLRE 186


>gi|328946362|gb|EGG40504.1| uracil DNA glycosylase [Streptococcus sanguinis SK1087]
          Length = 194

 Score = 41.7 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/167 (11%), Positives = 48/167 (28%), Gaps = 20/167 (11%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + I+G  P      +G  +  K+G+ L + L   E          + P       
Sbjct: 32  PKNARINIVGQAPGLKTQQAGLYWKDKSGDRLREWLGVDEETFYHSGYFAVLPMDFYFPG 91

Query: 165 NLSNIEMEICRPIIMRQIELISP--------KILLFIGNKTKNFFFNNDAQKTYQNLGKW 216
           +  + ++   +    +      P        ++ + IG   + ++ +           + 
Sbjct: 92  HGKSGDLPPRKNFADK---WHQPILELLPDIELTILIGQYAQKYYLHQTGNIKLTETVQH 148

Query: 217 SNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKAL 258
                P         VHP       + + P  +      L  L + +
Sbjct: 149 YQDYLPD----FFPLVHPSPRNQIWMAKNPWFEAEVVPELQVLVQKI 191


>gi|306825692|ref|ZP_07459031.1| uracil-DNA glycosylase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432053|gb|EFM35030.1| uracil-DNA glycosylase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 196

 Score = 41.7 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 42/136 (30%), Gaps = 9/136 (6%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP--WHPPG 162
                + I+G  P      +G  +  K+G+ L + L   E       +  + P  ++ PG
Sbjct: 32  PTTARINIVGQAPGFKTQEAGIYWKDKSGDRLREWLGVDEDTFYNSGLFAVIPMDFYFPG 91

Query: 163 NRNL---SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
           +         +    +       E  + ++ L IG   + ++ +           K    
Sbjct: 92  HGKSGDLPPRKGFAEKWHPQLLKECPNIELTLLIGQYAQAYYLHEKVSGKVTERVKHYQN 151

Query: 220 CTPHSIIPTLATVHPQ 235
             P         VHP 
Sbjct: 152 YLPEY----FPLVHPS 163


>gi|171682348|ref|XP_001906117.1| hypothetical protein [Podospora anserina S mat+]
 gi|170941133|emb|CAP66783.1| unnamed protein product [Podospora anserina S mat+]
          Length = 816

 Score = 41.7 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 27/76 (35%), Gaps = 10/76 (13%)

Query: 26  WVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHE------ 79
            V DEP  +    +     +   A  P++      +P      +  + A +  E      
Sbjct: 349 AVEDEPVADVPAPTPGPS-TAAPASAPVSPSAPTPTPAAASPATRTKSAKTPAERAKRTT 407

Query: 80  ---LKSLLRSFHDCHL 92
              LKSLL+S   C L
Sbjct: 408 QDTLKSLLKSLEGCAL 423


>gi|117921121|ref|YP_870313.1| phage SPO1 DNA polymerase domain-containing protein [Shewanella sp.
           ANA-3]
 gi|117613453|gb|ABK48907.1| phage SPO1 DNA polymerase domain protein [Shewanella sp. ANA-3]
          Length = 237

 Score = 41.7 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 63/229 (27%), Gaps = 42/229 (18%)

Query: 69  SIAQKACSLHELKSLLRSFHDCHLCST-----SLSTICATQTEGQDLMIIGYTPSDSDNI 123
             A +     EL  LL+    C LC       +   + A  +    ++I G  P    + 
Sbjct: 7   RPASEPNCSAELSELLKQIRACQLCQAELPLPAKPILQA--SSQARILIAGQAPGVKTHH 64

Query: 124 SGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEME-------I 173
            G PF   +G  L   L   +          I  +    P         + +        
Sbjct: 65  KGIPFDDASGERLRAWLNVSREQFYDPALFAIVPMGFCFPGTIERNGKKQGDKPPRPECA 124

Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFF----------------NNDAQKTYQNLGKWS 217
                     +   +++L +G    ++                  +N        + +  
Sbjct: 125 ATWHAKLLALMPQIELVLVLGQYAIDYHLPRAQAIGALNSQAIAVSNPQANKKITVTQAI 184

Query: 218 NLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKNL 261
              + H     +   HP       L Q+P  +      L TL+  + +L
Sbjct: 185 EQWSLHWP-RLMVMPHPSPRNNLWLKQHPEFE---HEHLPTLQARIADL 229


>gi|34763106|ref|ZP_00144077.1| Hypothetical Protein [Fusobacterium nucleatum subsp. vincentii ATCC
           49256]
 gi|27887240|gb|EAA24340.1| Hypothetical Protein [Fusobacterium nucleatum subsp. vincentii ATCC
           49256]
          Length = 197

 Score = 41.7 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 44/153 (28%), Gaps = 17/153 (11%)

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNL 166
              ++I+G  P      +   +  K+G+ L       E      ++  I P         
Sbjct: 37  KARIVIVGQAPGLKAQENRLYWKDKSGDKLRIWTGIDEKTFYSSNLLAIIPMDFYYPGKG 96

Query: 167 -----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221
                   +    +        L   ++ + IG   + F+     +         ++   
Sbjct: 97  KNGDLPPRKDFGDKWHNKILELLPDVELFILIGKYAQGFYLKGKLKD------NLTDTVR 150

Query: 222 PHSII--PTLATVHPQEL-IQYPLIKKNTW-HA 250
            +          VHP  L I+   +KKN W   
Sbjct: 151 AYKEYLPKFFPIVHPSPLNIR--WLKKNPWFED 181


>gi|331266834|ref|YP_004326464.1| uracil DNA glycosylase family protein [Streptococcus oralis Uo5]
 gi|326683506|emb|CBZ01124.1| uracil DNA glycosylase family protein [Streptococcus oralis Uo5]
          Length = 196

 Score = 41.3 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 48/167 (28%), Gaps = 15/167 (8%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + I+G  P      +G  +  K+G+ L   L   E       +  + P       
Sbjct: 32  PKTARINIVGQAPGLKTQEAGIYWKDKSGDRLRDWLGVDEDTFYNSGLFAVLPMDFYFPG 91

Query: 165 NLSNIEMEICRPI---IMRQIELISP--KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
           +  + ++            Q+    P  ++ L IG   + ++ +           K    
Sbjct: 92  HGKSGDLPPRTGFAEKWHPQLLQELPDIQLTLLIGQYAQAYYLHEKVSGKVTERVKHYKD 151

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKALKN 260
             P         VHP       + + P  +      L   +K  L  
Sbjct: 152 YLPE----FFPLVHPSPRNQIWMAKNPWFESEVVPELKKRIKAILGE 194


>gi|262282576|ref|ZP_06060344.1| uracil-DNA glycosylase [Streptococcus sp. 2_1_36FAA]
 gi|262261867|gb|EEY80565.1| uracil-DNA glycosylase [Streptococcus sp. 2_1_36FAA]
          Length = 194

 Score = 41.3 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 21/200 (10%), Positives = 58/200 (29%), Gaps = 26/200 (13%)

Query: 75  CSLHELKSLL-RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
            ++ ++   +     +       +  + A   +   + I+G  P      +G  +  K+G
Sbjct: 2   RTIEDIAKAIMADPENQEYTKQGIKPLFAA-PKNARINIVGQAPGLKTQEAGLYWKDKSG 60

Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP------ 187
           + L + L   E          + P       +  + ++   +    +      P      
Sbjct: 61  DRLREWLGVDEETFYNSGYFAVLPMDFYFPGHGKSGDLPPRKDFADK---WHQPILDLLP 117

Query: 188 --KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII--PTLATVHPQ-----ELI 238
             ++ + IG   + ++ +           K +     +          VHP       + 
Sbjct: 118 DIELTILIGQYAQKYYLHQKGNI------KLTETVQRYKDYLPDFFPLVHPSPRNQIWMA 171

Query: 239 QYPLIKKNTWHALITLKKAL 258
           + P  +      L  L + +
Sbjct: 172 KNPWFEAEVVPKLQALVQKI 191


>gi|315223174|ref|ZP_07865035.1| uracil DNA glycosylase family protein [Streptococcus anginosus
           F0211]
 gi|315187606|gb|EFU21360.1| uracil DNA glycosylase family protein [Streptococcus anginosus
           F0211]
          Length = 193

 Score = 41.3 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 21/191 (10%), Positives = 56/191 (29%), Gaps = 18/191 (9%)

Query: 75  CSLHELKSLL-RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
            +L ++K  +     +       +  + A   +   + I+G  P      +   ++ K+G
Sbjct: 2   ETLEDIKKAIMADSQNQAYTERGIEPLFAA-PKTARINIVGQAPGIKAQETRLYWNDKSG 60

Query: 134 NMLDKMLQSIEIMRTQIHISMISP--WHPPGNRNLSNIEMEICRPIIMRQ---IELISPK 188
           + L + +                P  ++ PG+    ++           Q     L   +
Sbjct: 61  DRLREWMGVDYDTFYHSGYFAAIPMDFYFPGHGKSGDLPPRKGFAEKWHQPILELLPDLE 120

Query: 189 ILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYPL 242
           + + IG   + ++ +          +  + +             VHP       + + P 
Sbjct: 121 LTILIGQYAQKYYLHQKGTVKLTDTVKHYQDYLPEF-----FPLVHPSPRNQIWMAKNPW 175

Query: 243 IKKNTWHALIT 253
             +     L  
Sbjct: 176 FAETVIPDLRE 186


>gi|283769426|ref|ZP_06342324.1| uracil-DNA glycosylase, family 4 [Bulleidia extructa W1219]
 gi|283103951|gb|EFC05336.1| uracil-DNA glycosylase, family 4 [Bulleidia extructa W1219]
          Length = 196

 Score = 41.3 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 52/156 (33%), Gaps = 22/156 (14%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   L+I+G  P      S   ++  +GN L   L    + R + + + +    P    
Sbjct: 31  PKEAKLVIVGQAPGIKAQESHLYWNDPSGNRLRDWL---GLSREEFYQTNLIAHLPMDFY 87

Query: 165 NL--------SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGK 215
                     +  +    +   +   +L   ++ L IG   + ++     +KT  + +  
Sbjct: 88  FPGSAKRGDLAPRKGFAQKWHPLLLKQLSEVELFLLIGQYAQAYYLKERRKKTLTETVKN 147

Query: 216 WSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKN 246
           + N    +     L  VHP       L + P  +  
Sbjct: 148 YFNYLPEY-----LPLVHPSGRNGIWLKKNPWFEAE 178


>gi|330826245|ref|YP_004389548.1| uracil-DNA glycosylase superfamily [Alicycliphilus denitrificans
           K601]
 gi|329311617|gb|AEB86032.1| uracil-DNA glycosylase superfamily [Alicycliphilus denitrificans
           K601]
          Length = 196

 Score = 41.3 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 48/167 (28%), Gaps = 10/167 (5%)

Query: 74  ACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
           + SL  L   +R+   C                G  ++I G  P    + SG PF   +G
Sbjct: 2   SESLPALLHRVRACTICAAHLPLGPRPVLQAAAGARILIAGQAPGRKVHASGIPFDDASG 61

Query: 134 NMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKI- 189
             L   L            + I  +   +P    +        C P     +    P I 
Sbjct: 62  ARLRAWLGLSPEQFYDPALVAILPMGFCYPGPGPSGDAPPRPECPPAWRAPLLERLPHIA 121

Query: 190 -LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ 235
             + +G     +      ++  + + +W           T+   HP 
Sbjct: 122 LTVVLGQYALAWHLPQAPRQVTRAVQEWQRHWPH-----TVVLPHPS 163


>gi|319425874|gb|ADV53948.1| phage SPO1 DNA polymerase domain-containing protein [Shewanella
           putrefaciens 200]
          Length = 228

 Score = 41.3 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 49/151 (32%), Gaps = 14/151 (9%)

Query: 72  QKACSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129
             + S+  L + +R+ + C  HL   +   + A  +    ++I G  P    +  G PF 
Sbjct: 2   PSSASMTSLLAKIRACNQCQAHLPLAAKPILQA--SRQARILIAGQAPGIKTHDKGIPFD 59

Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI-----CRPIIMRQ 181
             +G  L   L   +          I  +    P         + +      C      Q
Sbjct: 60  DASGERLRSWLNVTREQFYNPALFAIIPMGFCFPGSIERNGKKQGDNPPRPECAATWHPQ 119

Query: 182 IELISPKI--LLFIGNKTKNFFFNNDAQKTY 210
           +  + P+I  ++ +G    ++    +     
Sbjct: 120 LLALMPQIELIVILGQYAIDYHLPRELFTES 150


>gi|319761903|ref|YP_004125840.1| uracil-DNA glycosylase superfamily [Alicycliphilus denitrificans
           BC]
 gi|317116464|gb|ADU98952.1| uracil-DNA glycosylase superfamily [Alicycliphilus denitrificans
           BC]
          Length = 200

 Score = 41.3 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 55/200 (27%), Gaps = 18/200 (9%)

Query: 72  QKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
                L  L   +R+   C                G  ++I G  P    + SG PF   
Sbjct: 4   PANEPLAALLGRVRACTICAAHLPLGPRPVLQAAAGARILIAGQAPGRKVHASGIPFDDA 63

Query: 132 TGNMLDKMLQ---SIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPK 188
           +G  L   L            + I  +   +P    +        C P     +    P 
Sbjct: 64  SGARLRAWLGLSPEQFYDPALVAILPMGFCYPGPGPSGDAPPRPECPPAWRAPLLARLPH 123

Query: 189 I--LLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQ-----ELIQYP 241
           I   + +G     +      ++  + +  W           T+   HP       L ++P
Sbjct: 124 IALTVVLGQYALAWHLPQSPRQVTRAVQDWQRHWPH-----TVVLPHPSPRNNGWLARHP 178

Query: 242 LIKKNTWHALITLKKALKNL 261
             +      L  ++  +  +
Sbjct: 179 WFEAEL---LPQVRARVAAV 195


>gi|260430804|ref|ZP_05784776.1| oligo-1,6-glucosidase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260418245|gb|EEX11503.1| oligo-1,6-glucosidase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 551

 Score = 40.9 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 48/140 (34%), Gaps = 20/140 (14%)

Query: 1   MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPIT 54
           +TS+  L+      Q+ +L +A F+ D GV     +  N   +++Q ++       Q   
Sbjct: 179 LTSQPDLNFHNPDVQDALLDVARFWLDMGVDGFRLDTINFYFHDAQLRDNPALPLDQRNA 238

Query: 55  NIRHIHSPLVQQ----ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICAT-QTEGQD 109
            I  + +P   Q    + S  +    L  L++L   +                     + 
Sbjct: 239 TIAPMVNPYNHQDHLYSKSQPENIAFLERLRALTDQYDG--------RACLGEVGDAQRG 290

Query: 110 LMIIGY-TPSDSDNISGKPF 128
           L I+G  T  D        F
Sbjct: 291 LEIMGEYTRGDKRMHMCYAF 310


>gi|227873088|ref|ZP_03991382.1| uracil-DNA glycosylase [Oribacterium sinus F0268]
 gi|227841069|gb|EEJ51405.1| uracil-DNA glycosylase [Oribacterium sinus F0268]
          Length = 211

 Score = 40.9 bits (94), Expect = 0.17,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 51/179 (28%), Gaps = 16/179 (8%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGN 134
            +L EL   +++  +    +           E   ++++G  P      SG PF   +G 
Sbjct: 6   KALEELVEEIKALPENQSYTERGIPPIFQFHEESRILLVGQAPGRKVEESGIPFHDLSGK 65

Query: 135 MLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILL 191
            L + +   + +   ++   I M   +   G          + +        L   K+ +
Sbjct: 66  RLMEWMGISEEVFYGKSISIIPMDFYYPGKGKGGDLPPRPFMRKYHDAVAALLPKVKLRI 125

Query: 192 FIGNKTKNF------------FFNNDAQKTYQNLGKWSNLCTPHSI-IPTLATVHPQEL 237
            IG                            +  G  S L    S  I     VHP  L
Sbjct: 126 LIGKYAIAHYDPKGAKLPLKDLLYPCGDAWGKAHGTSSLLSGQTSSEILNFPLVHPSPL 184


>gi|327197775|ref|YP_004301473.1| gp140 [Brochothrix phage A9]
 gi|299810375|gb|ADJ53174.1| gp140 [Brochothrix phage A9]
          Length = 700

 Score = 40.9 bits (94), Expect = 0.17,   Method: Composition-based stats.
 Identities = 9/94 (9%), Positives = 28/94 (29%), Gaps = 3/94 (3%)

Query: 163 NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP 222
            +  +  E++     + ++I    P I++ +G          +     +      ++ T 
Sbjct: 93  YKPPTAGELKPEYQNLRQRINAYKPDIIIPMGGSGCKALLGKNTITALRGRPVLKDVVTE 152

Query: 223 HSII---PTLATVHPQELIQYPLIKKNTWHALIT 253
                    L T     ++  P + ++       
Sbjct: 153 EGETHTCYILPTFSISHMLASPSVSRHVKTDFRL 186


>gi|293364971|ref|ZP_06611688.1| uracil DNA glycosylase [Streptococcus oralis ATCC 35037]
 gi|291316421|gb|EFE56857.1| uracil DNA glycosylase [Streptococcus oralis ATCC 35037]
          Length = 205

 Score = 40.9 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 50/171 (29%), Gaps = 23/171 (13%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159
            +   + I+G  P      +G  +  K+G+ L + L   +          +  +  +   
Sbjct: 41  PKTARINIVGQAPGFKTQEAGIYWKDKSGDRLREWLGVDEDTFYNSGYFAVLPMDFYFPG 100

Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
              + +L        +       EL   ++ L IG   + ++            GK +  
Sbjct: 101 HGKSGDLPPRTGFAEKWHPQLLQELPDIQLTLLIGQYAQAYYLQEKVS------GKVTER 154

Query: 220 CTPHSIIPTLATV----HPQ-----ELIQYPLIKKNTWHALIT-LKKALKN 260
              +     L T     HP       + + P  +      L   +K  L  
Sbjct: 155 VKHYQNY--LPTYFPLVHPSPRNQIWMAKNPWFESEVVPELKKRIKTILGE 203


>gi|307703220|ref|ZP_07640166.1| uracil DNA glycosylase superfamily protein [Streptococcus oralis
           ATCC 35037]
 gi|307623295|gb|EFO02286.1| uracil DNA glycosylase superfamily protein [Streptococcus oralis
           ATCC 35037]
          Length = 196

 Score = 40.9 bits (94), Expect = 0.21,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 50/171 (29%), Gaps = 23/171 (13%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159
            +   + I+G  P      +G  +  K+G+ L + L   +          +  +  +   
Sbjct: 32  PKTARINIVGQAPGFKTQEAGIYWKDKSGDRLREWLGVDEDTFYNSGYFAVLPMDFYFPG 91

Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
              + +L        +       EL   ++ L IG   + ++            GK +  
Sbjct: 92  HGKSGDLPPRTGFAEKWHPQLLQELPDIQLTLLIGQYAQAYYLQEKVS------GKVTER 145

Query: 220 CTPHSIIPTLATV----HPQ-----ELIQYPLIKKNTWHALIT-LKKALKN 260
              +     L T     HP       + + P  +      L   +K  L  
Sbjct: 146 VKHYQNY--LPTYFPLVHPSPRNQIWMAKNPWFESEVVPELKKRIKTILGE 194


>gi|319947165|ref|ZP_08021399.1| uracil DNA glycosylase [Streptococcus australis ATCC 700641]
 gi|319747213|gb|EFV99472.1| uracil DNA glycosylase [Streptococcus australis ATCC 700641]
          Length = 214

 Score = 40.5 bits (93), Expect = 0.21,   Method: Composition-based stats.
 Identities = 23/169 (13%), Positives = 50/169 (29%), Gaps = 19/169 (11%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNR 164
            +   + IIG  P      +   +  K+G+ L + L   E       +  + P       
Sbjct: 49  PKTARINIIGQAPGLKTQEACLYWKDKSGDRLREWLGVDEETFYHSGLFAVIPMDFYFPG 108

Query: 165 NL-----SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
           +         +    +   +   E    ++ L IG   + ++ +          GK +  
Sbjct: 109 HGKSGDLPPRKGFAEKWHPLLLKECPDIELTLLIGQYAQAYYLHEKVS------GKVTER 162

Query: 220 CTPHSII--PTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKALKN 260
              +          VHP       + + P  +     AL   +++ L  
Sbjct: 163 VRRYKDYLPDYFPLVHPSPRNQIWMAKNPWFEAEVVPALQARVQQILAE 211


>gi|313891296|ref|ZP_07824914.1| uracil-DNA glycosylase family protein [Streptococcus pseudoporcinus
           SPIN 20026]
 gi|313120363|gb|EFR43484.1| uracil-DNA glycosylase family protein [Streptococcus pseudoporcinus
           SPIN 20026]
          Length = 200

 Score = 40.5 bits (93), Expect = 0.22,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 50/171 (29%), Gaps = 21/171 (12%)

Query: 103 TQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG 162
                  ++I+G  P      +   ++ ++G  L + L              I P     
Sbjct: 37  DAPSSAKIVIVGQAPGIIAQKTKLFWNDRSGVKLRQWLDVDSDTFYHSGKFAILPMDFYY 96

Query: 163 NRNLSNIEMEICRPIIMRQIELISP--------KILLFIGNKTKNFFFNNDAQKTYQNLG 214
                  ++   +    +      P        ++++ +G   + ++     +KT     
Sbjct: 97  PGKGKGGDLPPRKGFADK---WHQPLLDLLPTVELIILVGQYAQAYYLGKAKKKTLTETV 153

Query: 215 KWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKALK 259
           K      P         VHP       L + P  ++    AL   + K LK
Sbjct: 154 KAYQDYLP----RFFPLVHPSPRNQLWLKKNPWFEEEVIPALQARVAKLLK 200


>gi|116250520|ref|YP_766358.1| alpha-glucosidase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115255168|emb|CAK06242.1| putative alpha-glucosidase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 550

 Score = 40.5 bits (93), Expect = 0.22,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 50/136 (36%), Gaps = 12/136 (8%)

Query: 1   MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYESQ-RKEKSIDSAIQPI 53
           +TS+  ++      Q+++L +  F+ + GV     +  N   +++Q R   ++    +  
Sbjct: 175 LTSQPDMNLHNPEVQDRLLDVVRFWLNRGVDGFRLDTINFYFHDTQLRDNPALAPERRNA 234

Query: 54  TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113
           +    ++    Q+      +  +L  LK       +      +++ +       + L I+
Sbjct: 235 STAPAVNPYNFQEHIYDKNRPENLAFLKRFRAVLEEFP----AIAAVGEVGDSQRGLEIV 290

Query: 114 GY-TPSDSDNISGKPF 128
           G  T  +        F
Sbjct: 291 GEYTSGNDKMHMCYAF 306


>gi|146319114|ref|YP_001198826.1| Uracil-DNA glycosylase [Streptococcus suis 05ZYH33]
 gi|146321319|ref|YP_001201030.1| Uracil-DNA glycosylase [Streptococcus suis 98HAH33]
 gi|253752162|ref|YP_003025303.1| uracil DNA glycosylase superfamily protein [Streptococcus suis
           SC84]
 gi|253753988|ref|YP_003027129.1| uracil DNA glycosylase superfamily protein [Streptococcus suis
           P1/7]
 gi|253755923|ref|YP_003029063.1| uracil DNA glycosylase superfamily protein [Streptococcus suis
           BM407]
 gi|145689920|gb|ABP90426.1| Uracil-DNA glycosylase [Streptococcus suis 05ZYH33]
 gi|145692125|gb|ABP92630.1| Uracil-DNA glycosylase [Streptococcus suis 98HAH33]
 gi|251816451|emb|CAZ52087.1| uracil DNA glycosylase superfamily protein [Streptococcus suis
           SC84]
 gi|251818387|emb|CAZ56215.1| uracil DNA glycosylase superfamily protein [Streptococcus suis
           BM407]
 gi|251820234|emb|CAR46671.1| uracil DNA glycosylase superfamily protein [Streptococcus suis
           P1/7]
 gi|292558750|gb|ADE31751.1| Uracil-DNA glycosylase superfamily [Streptococcus suis GZ1]
 gi|319758549|gb|ADV70491.1| Uracil-DNA glycosylase [Streptococcus suis JS14]
          Length = 192

 Score = 40.5 bits (93), Expect = 0.22,   Method: Composition-based stats.
 Identities = 17/136 (12%), Positives = 45/136 (33%), Gaps = 10/136 (7%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPP 161
                ++IIG  P       G+ F   +G+ L + L   +          I  +  ++P 
Sbjct: 31  PSTAKILIIGQAPGLKTQEKGRLFDDASGSNLRQWLGVDRQTFYESGHFAILPMDFYYPG 90

Query: 162 GNR--NLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
             +  +L   +    +   +   +L   ++ + +GN  + ++     +   + +    + 
Sbjct: 91  KGKSGDLPPRKDFAPKWHPLIMKQLPQIELTILVGNYAQTYYLEKSQRNLTERVKHADDY 150

Query: 220 CTPHSIIPTLATVHPQ 235
              +         HP 
Sbjct: 151 LPTY-----FPLPHPS 161


>gi|146292574|ref|YP_001182998.1| phage SPO1 DNA polymerase domain-containing protein [Shewanella
           putrefaciens CN-32]
 gi|145564264|gb|ABP75199.1| phage SPO1 DNA polymerase domain protein [Shewanella putrefaciens
           CN-32]
          Length = 228

 Score = 40.5 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 49/151 (32%), Gaps = 14/151 (9%)

Query: 72  QKACSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129
             + S+  L + +R+ + C  HL   +   + A  +    ++I G  P    +  G PF 
Sbjct: 2   PSSASMTSLLAKIRACNQCQAHLPLAAKPILQA--SRQARILIAGQAPGIKTHDKGIPFD 59

Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEME-----ICRPIIMRQ 181
             +G  L   L   +          I  +    P         + +      C      Q
Sbjct: 60  DASGERLRSWLNVTREQFYNPALFAIIPMGFCFPGSIERNGKKQGDKPPRPECAATWHPQ 119

Query: 182 IELISPKI--LLFIGNKTKNFFFNNDAQKTY 210
           +  + P+I  ++ +G    ++    +     
Sbjct: 120 LLALMPQIELIVILGQYAIDYHLPRELFTES 150


>gi|307704362|ref|ZP_07641279.1| uracil DNA glycosylase superfamily protein [Streptococcus mitis
           SK597]
 gi|307622122|gb|EFO01142.1| uracil DNA glycosylase superfamily protein [Streptococcus mitis
           SK597]
          Length = 196

 Score = 40.5 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 22/167 (13%), Positives = 45/167 (26%), Gaps = 15/167 (8%)

Query: 105 TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWH-- 159
            +   + IIG  P      +G  +  ++G+ L   L   +          +  +  +   
Sbjct: 32  PKTARINIIGQAPGLKTQEAGLYWKDRSGDRLRDWLGVDEDTFYNSGYFAVLPMDFYFPG 91

Query: 160 PPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
              + +L        +       EL   ++ L IG   + ++             K    
Sbjct: 92  HGKSGDLPPRTGFAEKWHPQLLQELPDIQLTLLIGQYAQAYYLQEKVSGKVTERVKHYQN 151

Query: 220 CTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALIT-LKKALKN 260
             P         VHP       + +    +      L   +K  L  
Sbjct: 152 YLPTY----FPLVHPSPRNQIWMAKNSWFESEVVPDLKKRIKTILGE 194


>gi|239978176|ref|ZP_04700700.1| uracil-DNA glycosylase [Streptomyces albus J1074]
 gi|291450071|ref|ZP_06589461.1| uracil-DNA glycosylase [Streptomyces albus J1074]
 gi|291353020|gb|EFE79922.1| uracil-DNA glycosylase [Streptomyces albus J1074]
          Length = 165

 Score = 40.5 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 35/117 (29%), Gaps = 13/117 (11%)

Query: 141 QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--KILLFIGNKTK 198
           +          +       PP N   +  E + CRP + R+++L+ P  +  + +G    
Sbjct: 33  RDDGQRLYGTRLVSPVHCVPPDN-RPTPAERDTCRPWMARELDLLGPTLRAAVVLGGFGW 91

Query: 199 NFF---FNNDAQKTYQNL-----GKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNT 247
                          +       G  + +  P   +  L   HP    +     + T
Sbjct: 92  QALMPVLTAAGYVVPRPRPAFGHGAHARIEGPDGPLDLLGCYHPSP--RNTSTGRLT 146


>gi|120599430|ref|YP_964004.1| phage SPO1 DNA polymerase domain-containing protein [Shewanella sp.
           W3-18-1]
 gi|120559523|gb|ABM25450.1| phage SPO1 DNA polymerase domain protein [Shewanella sp. W3-18-1]
          Length = 228

 Score = 40.5 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 49/151 (32%), Gaps = 14/151 (9%)

Query: 72  QKACSLHELKSLLRSFHDC--HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129
             + S+  L + +R+ + C  HL   +   + A  +    ++I G  P    +  G PF 
Sbjct: 2   PNSASITSLLAKIRACNQCQAHLPLAAKPILQA--SRQARILIAGQAPGIKTHDKGIPFD 59

Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGNRNLSNIEME-----ICRPIIMRQ 181
             +G  L   L   +          I  +    P         + +      C      Q
Sbjct: 60  DASGERLRSWLNVTREQFYNPALFAIIPMGFCFPGSIERNGKKQGDKPPRPECAATWHPQ 119

Query: 182 IELISPKI--LLFIGNKTKNFFFNNDAQKTY 210
           +  + P+I  ++ +G    ++    +     
Sbjct: 120 LLALMPQIELIVILGQYAIDYHLPRELFTES 150


>gi|241203144|ref|YP_002974240.1| alpha amylase catalytic region [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240857034|gb|ACS54701.1| alpha amylase catalytic region [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 550

 Score = 40.5 bits (93), Expect = 0.26,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 50/136 (36%), Gaps = 12/136 (8%)

Query: 1   MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYESQ-RKEKSIDSAIQPI 53
           +TS+  ++      Q+++L +  F+ + GV     +  N   +++Q R   ++    +  
Sbjct: 175 LTSQPDMNLHNPEVQDRLLDVVRFWLNRGVDGFRLDTINFYFHDTQLRDNPALAPERRNA 234

Query: 54  TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113
           +    ++    Q+      +  +L  LK       +      +++ +       + L I+
Sbjct: 235 STAPAVNPYNFQEHLYDKNRPENLAFLKRFRAVLEEFP----AIAAVGEVGDSQRGLEIV 290

Query: 114 GY-TPSDSDNISGKPF 128
           G  T  +        F
Sbjct: 291 GEYTSGNDKMHMCYAF 306


>gi|198284754|ref|YP_002221075.1| hypothetical protein Lferr_2674 [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218666216|ref|YP_002427435.1| pyruvate dehydrogenase complex, E2 and E3 components
           [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|198249275|gb|ACH84868.1| catalytic domain of components of various dehydrogenase complexes
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218518429|gb|ACK79015.1| pyruvate dehydrogenase complex, E2 and E3 components
           [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 983

 Score = 40.1 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 26/91 (28%), Gaps = 3/91 (3%)

Query: 32  NNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCH 91
             +          +I +          I      +  + A+ A  L++LK  +    +  
Sbjct: 441 IAQFDAIVTPGTAAIIAIAGNGPEGMPITITADHRVVNGAEAALFLNDLKQAIEHPEN-- 498

Query: 92  LCSTSLSTICATQTEGQDLMIIGYTPSDSDN 122
               S   +         +++IG  P   D 
Sbjct: 499 -WLGSGGPVIPEGDYDVQVLVIGAGPGGEDC 528


>gi|59003618|gb|AAW83618.1| gag protein [Human immunodeficiency virus 1]
          Length = 499

 Score = 40.1 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 14/142 (9%), Positives = 32/142 (22%), Gaps = 13/142 (9%)

Query: 105 TEGQDLMIIGYTPSD--SDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPG 162
                +++ G  P     + ++     G  G+    + +++    +   +     +  P 
Sbjct: 324 NPDCKIILKGLGPGATLEEMMTACQGVGGPGHKARVLAEAMSQANSTNIMMQRGNFRGPK 383

Query: 163 NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNF---------FFNNDAQKTYQNL 213
                    +     I R       K     G +             F            
Sbjct: 384 RTVKCFNCGKEG--HIARNCRAPRKKGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRP 441

Query: 214 GKWSNLCTPHSIIPTLATVHPQ 235
           G +       +  P   T  P 
Sbjct: 442 GNFLQNRPEPTAPPVEPTAPPA 463


>gi|254704177|ref|ZP_05166005.1| hypothetical protein Bsuib36_09669 [Brucella suis bv. 3 str. 686]
          Length = 99

 Score = 40.1 bits (92), Expect = 0.29,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 33/94 (35%), Gaps = 11/94 (11%)

Query: 77  LHELKSLLRSFHDC---HL----CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFS 129
           L EL+  +++   C    L         + +C        + I G  P    + +  PF+
Sbjct: 7   LDELRHSIQACRLCRDTPLFPPPLPHEPNPVCIISDT-ARIAICGQAPGIRVHNTSLPFN 65

Query: 130 GKTGNMLDKML---QSIEIMRTQIHISMISPWHP 160
             +G+ L + L   +      ++  I  +    P
Sbjct: 66  DPSGDRLRQWLGVTREEFYDASRFAIVPMGFCFP 99


>gi|227511174|ref|ZP_03941223.1| uracil-DNA glycosylase [Lactobacillus buchneri ATCC 11577]
 gi|227523380|ref|ZP_03953429.1| uracil-DNA glycosylase [Lactobacillus hilgardii ATCC 8290]
 gi|227085656|gb|EEI20968.1| uracil-DNA glycosylase [Lactobacillus buchneri ATCC 11577]
 gi|227089486|gb|EEI24798.1| uracil-DNA glycosylase [Lactobacillus hilgardii ATCC 8290]
          Length = 193

 Score = 40.1 bits (92), Expect = 0.30,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 43/136 (31%), Gaps = 9/136 (6%)

Query: 107 GQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML---QSIEIMRTQIHISMISPWHPPGN 163
              ++II   PS     S   ++  +G+ L   +   +       +I +  +  ++P   
Sbjct: 34  NAKILIISQAPSRKAQESMVFWNDPSGDRLRDWMGIDKDRFYHSGKIAVMPLDFYYPGKG 93

Query: 164 RNL--SNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCT 221
            +      +    +        +   ++ L IG   + ++   + QK      +      
Sbjct: 94  IHGDLPPRKGFADKWHQPLLSLMPHVQLKLLIGQYAQKYYLQKNRQKNLTETVRCFEDYL 153

Query: 222 PHSIIPTLATVHPQEL 237
           P         VHP  L
Sbjct: 154 PEY----FPLVHPSPL 165


>gi|209547966|ref|YP_002279883.1| alpha amylase catalytic region [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209533722|gb|ACI53657.1| alpha amylase catalytic region [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 550

 Score = 40.1 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 18/136 (13%), Positives = 48/136 (35%), Gaps = 12/136 (8%)

Query: 1   MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYES-QRKEKSIDSAIQPI 53
           +TS+  ++      Q+++L +  F+ + GV     +  N   ++   R   ++    +  
Sbjct: 175 LTSQPDMNLHNPEVQDRLLDVVRFWLNRGVDGFRLDTINFYFHDPLLRDNPALAPERRNA 234

Query: 54  TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113
           +    ++    Q+      +  +L  LK       +      +++ +       + L I+
Sbjct: 235 STAPAVNPYNFQEHVYDKNRPENLAFLKRFRAVLEEFP----AIAAVGEVGDSQRGLEIV 290

Query: 114 GY-TPSDSDNISGKPF 128
           G  T  +        F
Sbjct: 291 GEYTSGNDKMHMCYAF 306


>gi|1750280|gb|AAB41628.1| dihydrolipoyl transacetylase and lipoamide dehydrogenase of the
           pyruvate dehydrogenase complex [Acidithiobacillus
           ferrooxidans]
          Length = 978

 Score = 40.1 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 26/91 (28%), Gaps = 3/91 (3%)

Query: 32  NNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCH 91
             +          +I +          I      +  + A+ A  L++LK  +    +  
Sbjct: 439 IAQFDAIVTPGTAAIIAIAGNGPEGMPITITADHRVVNGAEAALFLNDLKQAIEHPEN-- 496

Query: 92  LCSTSLSTICATQTEGQDLMIIGYTPSDSDN 122
               S   +         +++IG  P   D 
Sbjct: 497 -WLGSGGPVIPEGDYDVQVLVIGAGPGGEDC 526


>gi|255022240|ref|ZP_05294235.1| Dihydrolipoamide acetyltransferase component of pyruvate
           dehydrogenase complex / Dihydrolipoamide dehydrogenase
           of pyruvate dehydrogenase complex [Acidithiobacillus
           caldus ATCC 51756]
 gi|254968331|gb|EET25898.1| Dihydrolipoamide acetyltransferase component of pyruvate
           dehydrogenase complex / Dihydrolipoamide dehydrogenase
           of pyruvate dehydrogenase complex [Acidithiobacillus
           caldus ATCC 51756]
          Length = 727

 Score = 40.1 bits (92), Expect = 0.33,   Method: Composition-based stats.
 Identities = 11/91 (12%), Positives = 27/91 (29%), Gaps = 3/91 (3%)

Query: 32  NNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCH 91
            ++          +I +      +   +      +  + A  A  L +LK+L+ +     
Sbjct: 185 VSQFDAIVTPGTAAILAVAATGPDGMPVTISADHRVVNGADAAAFLKDLKALVEAPQS-- 242

Query: 92  LCSTSLSTICATQTEGQDLMIIGYTPSDSDN 122
               +             +++IG  P   D 
Sbjct: 243 -WLGASGPAIPEGNYDVQVLVIGAGPGGEDC 272


>gi|85708804|ref|ZP_01039870.1| hypothetical protein NAP1_06175 [Erythrobacter sp. NAP1]
 gi|85690338|gb|EAQ30341.1| hypothetical protein NAP1_06175 [Erythrobacter sp. NAP1]
          Length = 141

 Score = 40.1 bits (92), Expect = 0.34,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 54/139 (38%), Gaps = 7/139 (5%)

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170
           M++   P   +  S +  +G  G +LD++L ++ +    ++++   P       + + I 
Sbjct: 1   MVLVLDP--EERDSDRLLNGTCGQLLDRILTAMRLPEDAVYLASALP-RHTPMADAATIA 57

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230
                 + +  I L++PK L+  G+ +      ++  K          +      +P + 
Sbjct: 58  AAGMDAVTLHHISLVAPKRLIAFGS-SIPPLLGHELTKDVS---SLREINHEKRSVPLMV 113

Query: 231 TVHPQELIQYPLIKKNTWH 249
           +     ++  P +K   W 
Sbjct: 114 SEGLDAMMAMPRLKARFWR 132


>gi|194768296|ref|XP_001966248.1| GF22816 [Drosophila ananassae]
 gi|190618550|gb|EDV34074.1| GF22816 [Drosophila ananassae]
          Length = 1192

 Score = 39.7 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 63/178 (35%), Gaps = 20/178 (11%)

Query: 97  LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML-------------QSI 143
             TI     +  D++I+G  P       G  ++G  GN   K L             +  
Sbjct: 654 KRTIPDHLCDNLDIVIVGINPGLFAAYKGHHYAGP-GNHFWKCLYLAGLTQEQMNADEDH 712

Query: 144 EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
           +++R  I  + +      G+ +L+  E++    I++ +++   PK+ +F G      F  
Sbjct: 713 KLLRQGIGFTNMVSRATKGSADLTRKEIKEGSRILLEKLQRFRPKVAVFNGKLIFEVFSG 772

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHP--QELIQYPLIKKNTWHALITLKKALK 259
                  +  G+        + I  + +      +L +    K   + AL   +  L 
Sbjct: 773 KKEFHFGRQPGRV---DGTDTYIWVMPSSSARCAQLPRA-ADKVPFYAALKKFRDFLN 826


>gi|190890403|ref|YP_001976945.1| alpha-glucosidase [Rhizobium etli CIAT 652]
 gi|190695682|gb|ACE89767.1| alpha-glucosidase protein [Rhizobium etli CIAT 652]
          Length = 550

 Score = 39.7 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 18/136 (13%), Positives = 48/136 (35%), Gaps = 12/136 (8%)

Query: 1   MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYES-QRKEKSIDSAIQPI 53
           +TS+  ++      Q+++L +  F+ + GV     +  N   ++   R   ++    +  
Sbjct: 175 LTSQPDMNLHNPEVQDRLLDVVRFWLNRGVDGFRLDTINFYFHDPLLRDNPALAPERRNA 234

Query: 54  TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113
           +    ++    Q+      +  +L  LK       +      +++ +       + L I+
Sbjct: 235 STAPAVNPYNFQEHIYDKNRPENLAFLKRFRAVLEEFP----AIAAVGEVGDSQRGLEIV 290

Query: 114 GY-TPSDSDNISGKPF 128
           G  T  +        F
Sbjct: 291 GEYTSGNDKMHMCYAF 306


>gi|222084905|ref|YP_002543434.1| alpha-glucosidase protein [Agrobacterium radiobacter K84]
 gi|221722353|gb|ACM25509.1| alpha-glucosidase protein [Agrobacterium radiobacter K84]
          Length = 550

 Score = 39.7 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 51/136 (37%), Gaps = 12/136 (8%)

Query: 1   MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYESQ-RKEKSIDSAIQPI 53
           +TS+  ++      Q+++L +  F+ D GV     +  N   ++ + R   +++ A +  
Sbjct: 175 LTSQPDMNLHNPEVQDRLLNVVRFWLDRGVDGFRLDTINFYFHDRELRDNPALEPARRNA 234

Query: 54  TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113
           +    ++    Q+      +  +L  LK       +      +++ +       + L I+
Sbjct: 235 STAPAVNPYNFQEHLYDKNRPENLAFLKRFRAVLDEYP----AIAAVGEVGDSQRGLEIV 290

Query: 114 GY-TPSDSDNISGKPF 128
           G  T  D        F
Sbjct: 291 GEYTAGDDKMHMCYAF 306


>gi|86356350|ref|YP_468242.1| alpha-glucosidase protein [Rhizobium etli CFN 42]
 gi|86280452|gb|ABC89515.1| alpha-glucosidase protein [Rhizobium etli CFN 42]
          Length = 550

 Score = 39.7 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 18/136 (13%), Positives = 48/136 (35%), Gaps = 12/136 (8%)

Query: 1   MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYES-QRKEKSIDSAIQPI 53
           +TS+  ++      Q+++L +  F+ + GV     +  N   ++   R   ++    +  
Sbjct: 175 LTSQPDMNLHNPEVQDRLLDVVRFWLNRGVDGFRLDTINFYFHDPLLRDNPALAPERRNA 234

Query: 54  TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113
           +    ++    Q+      +  +L  LK       +      +++ +       + L I+
Sbjct: 235 STAPAVNPYNFQEHIYDKNRPENLAFLKRFRAVLEEFP----AIAAVGEVGDSQRGLEIV 290

Query: 114 GY-TPSDSDNISGKPF 128
           G  T  +        F
Sbjct: 291 GEYTSGNDKMHMCYAF 306


>gi|148244565|ref|YP_001219259.1| hypothetical protein COSY_0416 [Candidatus Vesicomyosocius okutanii
           HA]
 gi|146326392|dbj|BAF61535.1| hypothetical protein [Candidatus Vesicomyosocius okutanii HA]
          Length = 139

 Score = 39.7 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 231 TVHPQELIQYPLIKKNTWHALITLKKALK 259
             HP  ++    +K+ TW  L  +K+ LK
Sbjct: 111 IHHPSNILTNDKLKRETWETLKKVKQCLK 139


>gi|309270629|ref|XP_906829.2| PREDICTED: G/T mismatch-specific thymine DNA glycosylase-like
           isoform 5 [Mus musculus]
          Length = 421

 Score = 39.7 bits (91), Expect = 0.42,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 43/132 (32%), Gaps = 7/132 (5%)

Query: 29  DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHEL------KS 82
           D P  E   E+ ++ K    A +P   +        +++    +      ++      K 
Sbjct: 58  DAPVQEPAPEAPKRRKRKPRAAEPQEPVEPKKPATSKKSGKSTKSKEKQEKITDAFKVKR 117

Query: 83  LLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142
            +  F+          T+    T   D++IIG  P       G  + G  GN   K L  
Sbjct: 118 KVDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGP-GNHFWKCLFM 176

Query: 143 IEIMRTQIHISM 154
             +   Q++   
Sbjct: 177 SGLSEVQLNHMN 188


>gi|218682681|ref|ZP_03530282.1| alpha amylase catalytic region [Rhizobium etli CIAT 894]
          Length = 550

 Score = 39.7 bits (91), Expect = 0.42,   Method: Composition-based stats.
 Identities = 18/136 (13%), Positives = 48/136 (35%), Gaps = 12/136 (8%)

Query: 1   MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYES-QRKEKSIDSAIQPI 53
           +TS+  ++      Q+++L +  F+ + GV     +  N   ++   R   ++    +  
Sbjct: 175 LTSQPDMNLHNPEVQDRLLDVVRFWLNRGVDGFRLDTINFYFHDPLLRDNPALAPERRNA 234

Query: 54  TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113
           +    ++    Q+      +  +L  LK       +      +++ +       + L I+
Sbjct: 235 STAPAVNPYNFQEHIYDKNRPENLAFLKRFRAVLEEFP----AIAAVGEVGDSQRGLEIV 290

Query: 114 GY-TPSDSDNISGKPF 128
           G  T  +        F
Sbjct: 291 GEYTSGNDKMHMCYAF 306


>gi|257061826|ref|YP_003139714.1| uracil-DNA glycosylase superfamily [Cyanothece sp. PCC 8802]
 gi|256591992|gb|ACV02879.1| Uracil-DNA glycosylase superfamily [Cyanothece sp. PCC 8802]
          Length = 225

 Score = 39.7 bits (91), Expect = 0.42,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 61/197 (30%), Gaps = 34/197 (17%)

Query: 93  CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI--------- 143
                  I         +   G      +  +G+P  G  G ++ +              
Sbjct: 31  KKDPTQPILYAGNLKSQICFFGRDLGRDEVHAGQPLIGAAGTLVRRGFYWAMHQKQAKTP 90

Query: 144 ---EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS-PKILLFIGNKTKN 199
              + +  ++ ++   P+ PPGN+  S    E  RP I + + +      L+ +G +   
Sbjct: 91  AELQTVCDRLLLTNTVPYKPPGNKAYSVAVKERFRPFIEQLLVIHWQGDQLITLGTEAFK 150

Query: 200 FF--------FNNDAQKTYQNLGKWS-------NLCTPH-SIIPTLATVHPQELIQYPLI 243
           +F         +   Q++ +   K +            H   I  +   HP      PL 
Sbjct: 151 WFSPYGKKGELDQFFQRSDRYSAKLAVTLEATDEFQLRHQRQIMLMPLPHPS-----PLN 205

Query: 244 KKNTWHALITLKKALKN 260
           ++        L++ L  
Sbjct: 206 QRYYGQFPQMLQQRLNE 222


>gi|301065707|ref|YP_003787730.1| uracil-DNA glycosylase [Lactobacillus casei str. Zhang]
 gi|300438114|gb|ADK17880.1| Uracil-DNA glycosylase [Lactobacillus casei str. Zhang]
          Length = 193

 Score = 39.7 bits (91), Expect = 0.45,   Method: Composition-based stats.
 Identities = 13/138 (9%), Positives = 39/138 (28%), Gaps = 11/138 (7%)

Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRN 165
               ++I    P      +   ++  +G+ L   +   +          + P        
Sbjct: 33  PEATILIASQAPGRKAQTTKTYWNDPSGDRLRTWMGVTKDQFYHSGKIAVLPLDFYYPGK 92

Query: 166 LSNIEMEICRPIIMR-----QIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNL 219
             + ++   +    +        +   ++ + IG   + ++     +KT    +  +   
Sbjct: 93  GKSGDLPPRKDFAAKWHPSLLALMPKIQLTIVIGAYAQKYYLGKHREKTLTATVKNFRTY 152

Query: 220 CTPHSIIPTLATVHPQEL 237
              +        VHP  L
Sbjct: 153 LPDY-----FPIVHPSPL 165


>gi|218248768|ref|YP_002374139.1| Uracil-DNA glycosylase superfamily [Cyanothece sp. PCC 8801]
 gi|218169246|gb|ACK67983.1| Uracil-DNA glycosylase superfamily [Cyanothece sp. PCC 8801]
          Length = 225

 Score = 39.3 bits (90), Expect = 0.47,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 61/197 (30%), Gaps = 34/197 (17%)

Query: 93  CSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI--------- 143
                  I         +   G      +  +G+P  G  G ++ +              
Sbjct: 31  KKDPTQPILYAGNLNSQICFFGRDLGRDEVHAGQPLIGAAGTLVRRGFYWAMHQKQAKTP 90

Query: 144 ---EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS-PKILLFIGNKTKN 199
              + +  ++ ++   P+ PPGN+  S    E  RP I + + +      L+ +G +   
Sbjct: 91  AELQTVCDRLLLTNTVPYKPPGNKAYSVAVKERFRPFIEQLLVIHWQGDQLITLGTEAFK 150

Query: 200 FF--------FNNDAQKTYQNLGKWS-------NLCTPH-SIIPTLATVHPQELIQYPLI 243
           +F         +   Q++ +   K +            H   I  +   HP      PL 
Sbjct: 151 WFSPYGKKGELDQFFQRSDRYSAKLAVTLEATDEFQLRHQRQIMLMPLPHPS-----PLN 205

Query: 244 KKNTWHALITLKKALKN 260
           ++        L++ L  
Sbjct: 206 QRYYGQFPQMLQQRLNE 222


>gi|239629589|ref|ZP_04672620.1| uracil-DNA glycosylase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|239528275|gb|EEQ67276.1| uracil-DNA glycosylase [Lactobacillus paracasei subsp. paracasei
           8700:2]
          Length = 193

 Score = 39.3 bits (90), Expect = 0.48,   Method: Composition-based stats.
 Identities = 13/138 (9%), Positives = 39/138 (28%), Gaps = 11/138 (7%)

Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRN 165
               ++I    P      +   ++  +G+ L   +   +          + P        
Sbjct: 33  PEATILIASQAPGRKAQTTKTYWNDPSGDRLRTWMGVTKDQFYHSGKIAVLPLDFYYPGK 92

Query: 166 LSNIEMEICRPIIMR-----QIELISPKILLFIGNKTKNFFFNNDAQKT-YQNLGKWSNL 219
             + ++   +    +        +   ++ + IG   + ++     +KT    +  +   
Sbjct: 93  GKSGDLPPRKDFAAKWHPSLLALMPKIQLTIVIGAYAQKYYLGKHREKTLTATVKNFRTY 152

Query: 220 CTPHSIIPTLATVHPQEL 237
              +        VHP  L
Sbjct: 153 LPDY-----FPIVHPSPL 165


>gi|15964451|ref|NP_384804.1| alpha-glucosidase protein [Sinorhizobium meliloti 1021]
 gi|307315813|ref|ZP_07595325.1| alpha amylase catalytic region [Sinorhizobium meliloti BL225C]
 gi|307318948|ref|ZP_07598379.1| alpha amylase catalytic region [Sinorhizobium meliloti AK83]
 gi|17380497|sp|Q9Z3R8|AGLA_RHIME RecName: Full=Probable alpha-glucosidase
 gi|15073628|emb|CAC45270.1| Probable alpha-glucosidase [Sinorhizobium meliloti 1021]
 gi|306895362|gb|EFN26117.1| alpha amylase catalytic region [Sinorhizobium meliloti AK83]
 gi|306898540|gb|EFN29215.1| alpha amylase catalytic region [Sinorhizobium meliloti BL225C]
          Length = 551

 Score = 39.3 bits (90), Expect = 0.49,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 46/136 (33%), Gaps = 12/136 (8%)

Query: 1   MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYESQ-RKEKSIDSAIQPI 53
           +TS+  L+      QE +L +  F+ + GV     +  N   ++ + R   ++    +  
Sbjct: 177 LTSQPDLNLHNPQVQEALLAVERFWLERGVDGFRLDTINFYFHDRELRDNPALVPERRNA 236

Query: 54  TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113
           +    ++    Q+      +  +L  LK       +      +++ +       + L I 
Sbjct: 237 STAPAVNPYNYQEHIYDKNRPENLEFLKRFRAVMDEFP----AIAAVGEVGDSQRGLEIA 292

Query: 114 GY-TPSDSDNISGKPF 128
           G  T           F
Sbjct: 293 GEYTSGGDKVHMCYAF 308


>gi|296532703|ref|ZP_06895392.1| NLP/P60 family protein [Roseomonas cervicalis ATCC 49957]
 gi|296266971|gb|EFH12907.1| NLP/P60 family protein [Roseomonas cervicalis ATCC 49957]
          Length = 199

 Score = 39.3 bits (90), Expect = 0.50,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 47/169 (27%), Gaps = 12/169 (7%)

Query: 75  CSLHELKSLLRSFHDCHLC-STSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTG 133
            +L  L +  R    C          I    +    L+II   P    +++G P++ K G
Sbjct: 5   ENLDALAAEARRCTLCAPHLPLGPKPIF-RVSPAARLLIISQAPGTQAHLTGIPWNDKAG 63

Query: 134 NMLDKM--LQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP---- 187
           + L     L         + I  +   +P G                + Q  L  P    
Sbjct: 64  DRLRDWLGLDRAGFYAETLAILPMGLCYP-GRLPRGGDAPPRPECAPLWQPRLGPPMTGI 122

Query: 188 KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQE 236
           ++ L +G                ++LG        H         HP  
Sbjct: 123 RLTLLLGRHAIA---GRLGAAAARDLGATVQGFRAHLPERIFPLPHPSW 168


>gi|227534338|ref|ZP_03964387.1| uracil-DNA glycosylase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|227188062|gb|EEI68129.1| uracil-DNA glycosylase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
          Length = 193

 Score = 39.3 bits (90), Expect = 0.51,   Method: Composition-based stats.
 Identities = 15/137 (10%), Positives = 38/137 (27%), Gaps = 9/137 (6%)

Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRN 165
               ++I    P      +   ++  +G+ L   +   +          + P        
Sbjct: 33  PEATILIASQAPGRKAQTTKTYWNDPSGDRLRTWMGVTKDQFYHSGKIAVLPLDFYYPGK 92

Query: 166 LSNIEMEICRPIIMR-----QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220
             + ++   +    +        +   ++ + IG   + ++     +KT     K     
Sbjct: 93  GKSGDLPPRKDFAAKWHPSLLALMPKIQLTIVIGAYAQKYYLGKHREKTLTATVKNFRAY 152

Query: 221 TPHSIIPTLATVHPQEL 237
            P         VHP  L
Sbjct: 153 LPDY----FPIVHPSPL 165


>gi|188582054|ref|YP_001925499.1| Uracil-DNA glycosylase superfamily [Methylobacterium populi BJ001]
 gi|179345552|gb|ACB80964.1| Uracil-DNA glycosylase superfamily [Methylobacterium populi BJ001]
          Length = 208

 Score = 39.3 bits (90), Expect = 0.51,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 45/190 (23%), Gaps = 16/190 (8%)

Query: 50  IQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD 109
                  + +  P + +A      A  +  L++L +        +            G  
Sbjct: 2   PDSPDAPKSLRDPALLEARRAMADADHVKPLRALAQRIAG-ERGADVPDPDPLDGGVGAR 60

Query: 110 LMIIGYTPS----DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRN 165
           L+++  TP      +  +S    +G   N+    L    I R    I    PW       
Sbjct: 61  LLLLLETPGPSIGRTGFVSRDNATGTAANLFR-FLAEAGIARRDTLIWNAVPWVIHAPGA 119

Query: 166 LSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI 225
            +                 +   +           F    A    +              
Sbjct: 120 RNRAPRRSEATAAAPYFAPLLALLPRLAVVVPAGRFAQAAAAPLSRLR----------PD 169

Query: 226 IPTLATVHPQ 235
           +P +   HP 
Sbjct: 170 LPVIPIPHPS 179


>gi|4210904|gb|AAD12047.1| AglA [Sinorhizobium meliloti]
          Length = 549

 Score = 39.3 bits (90), Expect = 0.51,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 46/136 (33%), Gaps = 12/136 (8%)

Query: 1   MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYESQ-RKEKSIDSAIQPI 53
           +TS+  L+      QE +L +  F+ + GV     +  N   ++ + R   ++    +  
Sbjct: 177 LTSQPDLNLHNPQVQEALLAVERFWLERGVDGFRLDTINFYFHDRELRDNPALVPERRNA 236

Query: 54  TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113
           +    ++    Q+      +  +L  LK       +      +++ +       + L I 
Sbjct: 237 STAPAVNPYNYQEHIYDKNRPENLEFLKRFRAVMDEFP----AIAAVGEVGDSQRGLEIA 292

Query: 114 GY-TPSDSDNISGKPF 128
           G  T           F
Sbjct: 293 GEYTSGGDKVHMCYAF 308


>gi|219684779|ref|ZP_03539721.1| conserved hypothetical protein [Borrelia garinii PBr]
 gi|219685323|ref|ZP_03540142.1| conserved hypothetical protein [Borrelia garinii Far04]
 gi|219671724|gb|EED28779.1| conserved hypothetical protein [Borrelia garinii PBr]
 gi|219673096|gb|EED30116.1| conserved hypothetical protein [Borrelia garinii Far04]
          Length = 199

 Score = 39.3 bits (90), Expect = 0.55,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 18/44 (40%)

Query: 216 WSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
              +      IP + T  P   I+ P +KK  W  L  +K  +K
Sbjct: 154 VRGIELRFKGIPLVFTHLPINQIKNPELKKEIWQDLKIIKGIIK 197


>gi|330719178|ref|ZP_08313778.1| alpha-glucosidase [Leuconostoc fallax KCTC 3537]
          Length = 557

 Score = 39.3 bits (90), Expect = 0.56,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 53/155 (34%), Gaps = 30/155 (19%)

Query: 4   KRILSQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPL 63
           +  + + ++  +  F+ D G+     +  N  + E+             + +I    + +
Sbjct: 174 ENPVVRNEVWDLMKFWLDKGIDGFRMDVINLISKEAG------------LPDIPKPDNAI 221

Query: 64  VQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNI 123
              A ++A     L+E    + S             + +      D+M +G  P      
Sbjct: 222 YADATAVANGPR-LNEFLQEMNS------------KVLS----HYDVMTVGEMPGA-TPE 263

Query: 124 SGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPW 158
             + ++  +GN L+ + Q   +  T      ++ W
Sbjct: 264 KAQEYTNLSGNELNMVFQFEHVALTPNPDERLTKW 298


>gi|260221487|emb|CBA30099.1| hypothetical protein Csp_A15460 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 137

 Score = 39.0 bits (89), Expect = 0.71,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 7/63 (11%)

Query: 83  LLRSFHDCHLCSTSLSTICAT-----QTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
           LL+    C LC  + +                ++++G  P    + SG PF   +G+ L 
Sbjct: 15  LLQQVRACTLC--APNLALGVRPILQVHPAARILVVGQAPGIRVHNSGVPFDNASGDRLR 72

Query: 138 KML 140
           + +
Sbjct: 73  EWM 75


>gi|228952008|ref|ZP_04114103.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228807540|gb|EEM54064.1| Uracil-DNA glycosylase superfamily [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 48

 Score = 38.6 bits (88), Expect = 0.79,   Method: Composition-based stats.
 Identities = 5/39 (12%), Positives = 9/39 (23%)

Query: 218 NLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKK 256
                        T HP  +     + +        LK+
Sbjct: 5   EFTWSEKEYHVFPTFHPASIFYNRSLLELIHEDFEKLKR 43


>gi|307331299|ref|ZP_07610421.1| Uracil-DNA glycosylase superfamily [Streptomyces violaceusniger Tu
           4113]
 gi|306883040|gb|EFN14104.1| Uracil-DNA glycosylase superfamily [Streptomyces violaceusniger Tu
           4113]
          Length = 180

 Score = 38.6 bits (88), Expect = 0.87,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 41/153 (26%), Gaps = 19/153 (12%)

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM---- 146
            L +     +     +G  ++  G  P      +G  F+ + GN     L +        
Sbjct: 5   ELEAARDRLVPDVVGDGLRVLFCGINPGLMTAATGHHFA-RPGNRFWPALHASGFTPRRL 63

Query: 147 ---------RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197
                    R  + I+ +          LS+ E      I+  ++  + P+ L   G   
Sbjct: 64  DPSEQAELVRHGLGITNVVARASARADELSDEEYREGGRILEEKVLRLRPRWLAVAGVTA 123

Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230
               F +                   + I  L 
Sbjct: 124 YRAAFGDKKATIGP-----QTRTIGDTRIWALP 151


>gi|3915099|sp|P56581|TDG_MOUSE RecName: Full=G/T mismatch-specific thymine DNA glycosylase;
           AltName: Full=C-JUN leucine zipper interactive protein
           JZA-3; AltName: Full=Thymine-DNA glycosylase
 gi|3420293|gb|AAC31900.1| T:G mismatch-specific thymine-DNA glycosylase TDGb isoform [Mus
           musculus]
 gi|26354735|dbj|BAC40994.1| unnamed protein product [Mus musculus]
 gi|148673050|gb|EDL04997.1| mCG122416 [Mus musculus]
          Length = 397

 Score = 38.6 bits (88), Expect = 0.88,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 43/128 (33%), Gaps = 3/128 (2%)

Query: 24  VYWVFDEPNNEATYESQRKEKSIDS--AIQPITNIRHIHSPLVQQADSIAQKACSLHELK 81
                 EP  EA    +RK ++ +    ++P        S    ++    +K     ++K
Sbjct: 33  ADAPVQEPAPEAPKRRKRKPRAAEPQEPVEPKKPATSKKSGKSTKSKEKQEKITDAFKVK 92

Query: 82  SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
             +  F+          T+    T   D++IIG  P       G  + G  GN   K L 
Sbjct: 93  RKVDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGP-GNHFWKCLF 151

Query: 142 SIEIMRTQ 149
              +   Q
Sbjct: 152 MSGLSEVQ 159


>gi|37589917|gb|AAH10315.2| Thymine DNA glycosylase [Mus musculus]
 gi|74146747|dbj|BAE41355.1| unnamed protein product [Mus musculus]
          Length = 421

 Score = 38.6 bits (88), Expect = 0.88,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 43/128 (33%), Gaps = 3/128 (2%)

Query: 24  VYWVFDEPNNEATYESQRKEKSIDS--AIQPITNIRHIHSPLVQQADSIAQKACSLHELK 81
                 EP  EA    +RK ++ +    ++P        S    ++    +K     ++K
Sbjct: 57  ADAPVQEPAPEAPKRRKRKPRAAEPQEPVEPKKPATSKKSGKSTKSKEKQEKITDAFKVK 116

Query: 82  SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
             +  F+          T+    T   D++IIG  P       G  + G  GN   K L 
Sbjct: 117 RKVDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGP-GNHFWKCLF 175

Query: 142 SIEIMRTQ 149
              +   Q
Sbjct: 176 MSGLSEVQ 183


>gi|50509430|dbj|BAD31049.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 826

 Score = 38.6 bits (88), Expect = 0.91,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 28/91 (30%), Gaps = 12/91 (13%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSL-----------HE 79
           P++E    ++    S  +   P   +R    P    A     +   L            E
Sbjct: 220 PDDELDAANKEVAMSQSAPPSPAP-MRAGVEPPTNIAGINGSRPTQLVVRTVRGRRAMEE 278

Query: 80  LKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
           L +++     C L + +   + +  +    +
Sbjct: 279 LVAMMAHCRRCELAAVADRHVVSRFSHKGRI 309


>gi|148689417|gb|EDL21364.1| mCG118034, isoform CRA_a [Mus musculus]
 gi|148689418|gb|EDL21365.1| mCG118034, isoform CRA_a [Mus musculus]
          Length = 397

 Score = 38.6 bits (88), Expect = 0.95,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 7/127 (5%)

Query: 29  DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHEL------KS 82
           D P  E   E+ ++ K    A +P   +        +++    +      ++      K 
Sbjct: 34  DAPVQEPAPEAPKRRKRKPRAAEPQEPVEPKKPATSKKSGKSTKSKEKQEKITDAFKVKR 93

Query: 83  LLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142
            +  F+          T+    T   D++IIG  P       G  + G  GN   K L  
Sbjct: 94  KVDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGP-GNHFWKCLFM 152

Query: 143 IEIMRTQ 149
             +   Q
Sbjct: 153 SGLSEVQ 159


>gi|218508552|ref|ZP_03506430.1| alpha-glucosidase protein [Rhizobium etli Brasil 5]
          Length = 282

 Score = 38.6 bits (88), Expect = 0.95,   Method: Composition-based stats.
 Identities = 18/136 (13%), Positives = 48/136 (35%), Gaps = 12/136 (8%)

Query: 1   MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYES-QRKEKSIDSAIQPI 53
           +TS+  ++      Q+++L +  F+ + GV     +  N   ++   R   ++    +  
Sbjct: 35  LTSQPDMNLHNPEVQDRLLDVVRFWLNRGVDGFRLDTINFYFHDPLLRDNPALAPERRNA 94

Query: 54  TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113
           +    ++    Q+      +  +L  LK       +      +++ +       + L I+
Sbjct: 95  STAPAVNPYNFQEHIYDKNRPENLAFLKRFRAVLEEFP----AIAAVGEVGDSQRGLEIV 150

Query: 114 GY-TPSDSDNISGKPF 128
           G  T  +        F
Sbjct: 151 GEYTSGNDKMHMCYAF 166


>gi|308486765|ref|XP_003105579.1| hypothetical protein CRE_22354 [Caenorhabditis remanei]
 gi|308255545|gb|EFO99497.1| hypothetical protein CRE_22354 [Caenorhabditis remanei]
          Length = 341

 Score = 38.6 bits (88), Expect = 0.97,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 46/184 (25%), Gaps = 23/184 (12%)

Query: 97  LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKT-------GNMLDKMLQSIEIMRTQ 149
            + +        +L +IG+  +++     + F  K        G  L   L        +
Sbjct: 162 SNFVFGMGHNAGELQLIGFNHAENAITHDEGFCDKFKRIPRGTGYYLSANLHRYCHGSPR 221

Query: 150 IHISMISPWHPPGNRNLSNIEMEIC-----RPIIMRQIELISPKILLFIGNKTKNFFFNN 204
             +  +               M           +M Q+++ +                  
Sbjct: 222 DDLESLVYCLLEMLGIQLPWTMMREPQSFVDHQMMFQMKMGNTSGAGLCEFVPIQEMLGM 281

Query: 205 DAQKTYQNLGKWSNLCTPHSIIPTLAT--VHPQELIQYP--LIKKNTWH--ALITLKKA- 257
               T Q    +  +    S     A   V P      P    K   W    L  LK+  
Sbjct: 282 CRALTCQEKPNYDEVKQLFSCPYVRAMREVKPSF----PYDAWKIEKWEESDLEILKRFD 337

Query: 258 LKNL 261
           ++ L
Sbjct: 338 IREL 341


>gi|325291982|ref|YP_004277846.1| alpha-glucosidase [Agrobacterium sp. H13-3]
 gi|325059835|gb|ADY63526.1| alpha-glucosidase [Agrobacterium sp. H13-3]
          Length = 561

 Score = 38.6 bits (88), Expect = 0.98,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 12/136 (8%)

Query: 1   MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYE-SQRKEKSIDSAIQPI 53
           +TS+  L+      QE++L I  F+   GV     +  N   ++   R   ++    +  
Sbjct: 185 LTSQPDLNLHNPEVQEELLNITRFWLKRGVDGFRLDTINFYFHDLELRDNPALAPERRNA 244

Query: 54  TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113
           +    ++    Q+      +  ++  LK       +    +     +       + L I+
Sbjct: 245 STAPAVNPYNFQEHLYDKNRPENIAFLKRFRAVLDEFPDIA----AVGEVGDSQRGLEIV 300

Query: 114 GY-TPSDSDNISGKPF 128
           G  T  D        F
Sbjct: 301 GEYTSGDDKMQMCYAF 316


>gi|148689419|gb|EDL21366.1| mCG118034, isoform CRA_b [Mus musculus]
          Length = 421

 Score = 38.6 bits (88), Expect = 0.98,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 7/127 (5%)

Query: 29  DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHEL------KS 82
           D P  E   E+ ++ K    A +P   +        +++    +      ++      K 
Sbjct: 58  DAPVQEPAPEAPKRRKRKPRAAEPQEPVEPKKPATSKKSGKSTKSKEKQEKITDAFKVKR 117

Query: 83  LLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142
            +  F+          T+    T   D++IIG  P       G  + G  GN   K L  
Sbjct: 118 KVDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGP-GNHFWKCLFM 176

Query: 143 IEIMRTQ 149
             +   Q
Sbjct: 177 SGLSEVQ 183


>gi|54024805|ref|YP_119047.1| putative DNA glycosylase [Nocardia farcinica IFM 10152]
 gi|54016313|dbj|BAD57683.1| putative DNA glycosylase [Nocardia farcinica IFM 10152]
          Length = 184

 Score = 38.6 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 40/153 (26%), Gaps = 19/153 (12%)

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150
            L + + +TI         ++  G  P      +G  F+ + GN     L          
Sbjct: 12  DLAAAAGTTIPDVVGPDLRVLFCGINPGLWSGATGHHFA-RPGNRFWPALFRSGFTPRLF 70

Query: 151 H-------------ISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197
                         I+ + P        L+  E+      +  ++    PK L  +G   
Sbjct: 71  RPDEQEELLALGLGITNVVPRTTAKADELTTAELREGGRALTERVRRYRPKALAVLGIGA 130

Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230
               F        +      +     + I  L 
Sbjct: 131 YRTAFGRPRTTVGR-----QDETIADTEIWVLP 158


>gi|166706901|ref|NP_035691.2| G/T mismatch-specific thymine DNA glycosylase isoform 1 [Mus
           musculus]
 gi|74211041|dbj|BAE37621.1| unnamed protein product [Mus musculus]
          Length = 397

 Score = 38.2 bits (87), Expect = 1.0,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 7/127 (5%)

Query: 29  DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHEL------KS 82
           D P  E   E+ ++ K    A +P   +        +++    +      ++      K 
Sbjct: 34  DAPVQEPAPEAPKRRKRKPRAAEPQEPVEPKKPATSKKSGKSTKSKEKQEKITDAFKVKR 93

Query: 83  LLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142
            +  F+          T+    T   D++IIG  P       G  + G  GN   K L  
Sbjct: 94  KVDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGP-GNHFWKCLFM 152

Query: 143 IEIMRTQ 149
             +   Q
Sbjct: 153 SGLSEVQ 159


>gi|166706899|ref|NP_766140.2| G/T mismatch-specific thymine DNA glycosylase isoform 2 [Mus
           musculus]
 gi|55250067|gb|AAH85471.1| Thymine DNA glycosylase [Mus musculus]
 gi|74218991|dbj|BAE37857.1| unnamed protein product [Mus musculus]
          Length = 421

 Score = 38.2 bits (87), Expect = 1.0,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 7/127 (5%)

Query: 29  DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHEL------KS 82
           D P  E   E+ ++ K    A +P   +        +++    +      ++      K 
Sbjct: 58  DAPVQEPAPEAPKRRKRKPRAAEPQEPVEPKKPATSKKSGKSTKSKEKQEKITDAFKVKR 117

Query: 83  LLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142
            +  F+          T+    T   D++IIG  P       G  + G  GN   K L  
Sbjct: 118 KVDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGP-GNHFWKCLFM 176

Query: 143 IEIMRTQ 149
             +   Q
Sbjct: 177 SGLSEVQ 183


>gi|26343819|dbj|BAC35566.1| unnamed protein product [Mus musculus]
          Length = 421

 Score = 38.2 bits (87), Expect = 1.0,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 7/127 (5%)

Query: 29  DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHEL------KS 82
           D P  E   E+ ++ K    A +P   +        +++    +      ++      K 
Sbjct: 58  DAPVQEPAPEAPKRRKRKPRAAEPQEPVEPKKPATSKKSGKSTKSKEKQEKITDAFKVKR 117

Query: 83  LLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142
            +  F+          T+    T   D++IIG  P       G  + G  GN   K L  
Sbjct: 118 KVDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGP-GNHFWKCLFM 176

Query: 143 IEIMRTQ 149
             +   Q
Sbjct: 177 SGLSEVQ 183


>gi|55250859|gb|AAH85470.1| Thymine DNA glycosylase [Mus musculus]
          Length = 421

 Score = 38.2 bits (87), Expect = 1.0,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 7/127 (5%)

Query: 29  DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHEL------KS 82
           D P  E   E+ ++ K    A +P   +        +++    +      ++      K 
Sbjct: 58  DAPVQEPAPEAPKRRKRKPRAAEPQEPVEPKKPATSKKSGKSTKSKEKQEKITDAFKVKR 117

Query: 83  LLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142
            +  F+          T+    T   D++IIG  P       G  + G  GN   K L  
Sbjct: 118 KVDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGP-GNHFWKCLFM 176

Query: 143 IEIMRTQ 149
             +   Q
Sbjct: 177 SGLSEVQ 183


>gi|219130271|ref|XP_002185292.1| probable cell surface glycoprotein [Phaeodactylum tricornutum CCAP
           1055/1]
 gi|217403207|gb|EEC43161.1| probable cell surface glycoprotein [Phaeodactylum tricornutum CCAP
           1055/1]
          Length = 623

 Score = 38.2 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 7/56 (12%), Positives = 12/56 (21%)

Query: 24  VYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHE 79
           V    D P +  T       +   +   P        +P             +  E
Sbjct: 308 VDAPVDAPTDAPTPLEPTPAEPTPAEPTPAEPTPAEPTPAEPTPAEPTPAEPTPAE 363


>gi|168701246|ref|ZP_02733523.1| putative DNA glycosylase [Gemmata obscuriglobus UQM 2246]
          Length = 184

 Score = 38.2 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 35/143 (24%), Gaps = 21/143 (14%)

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRT-- 148
            L +    T+      G  ++  G  P       G  F G+ GN     L          
Sbjct: 12  ELRAAQNKTVPDVIGPGLKVLFCGINPGLYTAAIGHHF-GRPGNRFWPTLHRAGFTPRLL 70

Query: 149 -----------QIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197
                         I+ +      G   L+N E       +  ++   +PK L  +G   
Sbjct: 71  DPSEELELLPLGYGITNVVARATVGADELTNDEYVTGGAALREKVLAFAPKYLAVLGIGA 130

Query: 198 K-------NFFFNNDAQKTYQNL 213
                           +   Q  
Sbjct: 131 YRVGFARPKAVIGLQPEPIGQTR 153


>gi|115472235|ref|NP_001059716.1| Os07g0499800 [Oryza sativa Japonica Group]
 gi|113611252|dbj|BAF21630.1| Os07g0499800 [Oryza sativa Japonica Group]
          Length = 752

 Score = 38.2 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 28/91 (30%), Gaps = 12/91 (13%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSL-----------HE 79
           P++E    ++    S  +   P   +R    P    A     +   L            E
Sbjct: 220 PDDELDAANKEVAMSQSAPPSPAP-MRAGVEPPTNIAGINGSRPTQLVVRTVRGRRAMEE 278

Query: 80  LKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
           L +++     C L + +   + +  +    +
Sbjct: 279 LVAMMAHCRRCELAAVADRHVVSRFSHKGRI 309


>gi|159184380|ref|NP_353620.2| alpha-glucosidase [Agrobacterium tumefaciens str. C58]
 gi|159139693|gb|AAK86405.2| alpha-glucosidase [Agrobacterium tumefaciens str. C58]
          Length = 551

 Score = 38.2 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 12/136 (8%)

Query: 1   MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYE-SQRKEKSIDSAIQPI 53
           +TS+  L+      QE++L I  F+   GV     +  N   ++   R   ++    +  
Sbjct: 175 LTSQPDLNLHNPEVQEELLNITRFWLKRGVDGFRLDTINFYFHDLELRDNPALAPERRNA 234

Query: 54  TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113
           +    ++    Q+      +  ++  LK       +    +     +       + L I+
Sbjct: 235 STAPAVNPYNFQEHLYDKNRPENIAFLKRFRAVLDEFPDIA----AVGEVGDSQRGLEIV 290

Query: 114 GY-TPSDSDNISGKPF 128
           G  T  D        F
Sbjct: 291 GEYTSGDDKMQMCYAF 306


>gi|227820894|ref|YP_002824864.1| alpha-glucosidase [Sinorhizobium fredii NGR234]
 gi|227339893|gb|ACP24111.1| alpha-glucosidase [Sinorhizobium fredii NGR234]
          Length = 551

 Score = 38.2 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 12/136 (8%)

Query: 1   MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYESQ-RKEKSIDSAIQPI 53
           +T++  L+      QE +L +  F+ + GV     +  N   ++ + R   ++    +  
Sbjct: 177 LTAQPDLNLHNRQVQEALLAVERFWLERGVDGFRLDTINFYFHDRELRDNPALAPERRNA 236

Query: 54  TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113
           +    ++    Q+      +  +L  LK       +      +++ +       + L I 
Sbjct: 237 STAPAVNPYNYQEHIYDKNRPENLEFLKRFRAVMDEFP----AIAAVGEVGDSQRGLEIA 292

Query: 114 GY-TPSDSDNISGKPF 128
           G  T           F
Sbjct: 293 GEYTSGGDKVQMCYAF 308


>gi|309263335|ref|XP_003086024.1| PREDICTED: G/T mismatch-specific thymine DNA glycosylase-like [Mus
           musculus]
          Length = 391

 Score = 38.2 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 7/127 (5%)

Query: 29  DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHEL------KS 82
           D P  E   E+ ++ K    A +P   +        +++    +      ++      K 
Sbjct: 58  DAPVQEPAPEAPKRRKRKPRAAEPQEPVEPKKPATSKKSGKSTKSKEKQEKITDAFKVKR 117

Query: 83  LLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQS 142
            +  F+          T+    T   D++IIG  P       G  + G  GN   K L  
Sbjct: 118 KVDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGP-GNHFWKCLFM 176

Query: 143 IEIMRTQ 149
             +   Q
Sbjct: 177 SGLSEVQ 183


>gi|261884746|ref|ZP_06008785.1| uracil-DNA glycosylase superfamily protein [Campylobacter fetus
           subsp. venerealis str. Azul-94]
          Length = 182

 Score = 38.2 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 5/35 (14%), Positives = 13/35 (37%)

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD 109
            +L  L+  +++ + C LC +        +     
Sbjct: 37  SNLKRLEEAIKNCNLCELCKSRNKACLGGKEPSFK 71


>gi|254561851|ref|YP_003068946.1| hypothetical protein METDI3446 [Methylobacterium extorquens DM4]
 gi|254269129|emb|CAX25092.1| conserved hypothetical protein; DNA glycosylase domain; Uracil DNA
           glycosylase superfamily [Methylobacterium extorquens
           DM4]
          Length = 208

 Score = 38.2 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/195 (12%), Positives = 45/195 (23%), Gaps = 26/195 (13%)

Query: 50  IQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD 109
                  + +  P +  A      A  +  L++  R        +               
Sbjct: 2   PASPDAPKSLRDPALLDARRAMADAPHVRPLRAFARVIAA-ERGAAVPDPDPLDGGVEAR 60

Query: 110 LMIIGYTPS----DSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPP---- 161
           L+++  TP      +  +S    +G  GN+    L    I R    I    PW       
Sbjct: 61  LLLLLETPGPAIGRTGFVSRDNPTGTAGNLFR-FLAEAGIARRNTLIWNAVPWVIHAPGA 119

Query: 162 -GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220
                                  L    +++  G   +       +        +     
Sbjct: 120 LNRAPRRAEASAAAPYFAPLLALLPRLAVVVPAGRFAREA-----SAPLSALRPEL---- 170

Query: 221 TPHSIIPTLATVHPQ 235
                 P +A  HP 
Sbjct: 171 ------PVVAIPHPS 179


>gi|162455733|ref|YP_001618100.1| protein kinase [Sorangium cellulosum 'So ce 56']
 gi|161166315|emb|CAN97620.1| Protein kinase [Sorangium cellulosum 'So ce 56']
          Length = 1384

 Score = 38.2 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 33/103 (32%), Gaps = 4/103 (3%)

Query: 13  LTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQ 72
           L   LF   +GV    D P  E     Q +     +A+ P  + R             A 
Sbjct: 349 LGALLFELCAGVPPHHDVPMTELPLVVQTEAPRPLAALAPGADPRLAAVIERCLEIDPAD 408

Query: 73  KACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGY 115
           +  S  EL+  L       L  +  +++       + L++   
Sbjct: 409 RFASGDELRDALEQL----LARSRHASVAPEGNPYRGLLVFDL 447


>gi|269123220|ref|YP_003305797.1| hypothetical protein Smon_0439 [Streptobacillus moniliformis DSM
           12112]
 gi|268314546|gb|ACZ00920.1| hypothetical protein Smon_0439 [Streptobacillus moniliformis DSM
           12112]
          Length = 188

 Score = 38.2 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/165 (11%), Positives = 53/165 (32%), Gaps = 5/165 (3%)

Query: 77  LHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNML 136
             EL+  +R+        ++   +         +M+I          +G       G ++
Sbjct: 2   WKELEYRIRTLSVYRNYKSNEEIMLGQGNRNSKIMLILPDIEKEALENGNILDSNNGKVI 61

Query: 137 DKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNK 196
             + + + +    ++I+ +               +E    +++ +I  ++PK ++ IG +
Sbjct: 62  QNIFKYLGLDIDNMYITSLYK-LDKNFIRYDVNTIEELLDVLITEIMYVNPKYIVTIGEE 120

Query: 197 TKNFF----FNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237
             N         D +K   N+ K       +     +       +
Sbjct: 121 VFNILISDALGKDNKKMNVNINKCVGNIYEYFEKVLIPIYDIPYI 165


>gi|218752959|ref|ZP_03531755.1| hypothetical protein MtubG1_05725 [Mycobacterium tuberculosis GM
           1503]
          Length = 137

 Score = 38.2 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 28/98 (28%), Gaps = 4/98 (4%)

Query: 141 QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE--LISPKILLFIGNKTK 198
            +  +   +I I+      PPGN   +  E   C P +  +        + ++ +G    
Sbjct: 13  AADGLRANRIRITAPVRCAPPGNS-PTPAERLTCSPWLNAEWRLVSDHIRAIVALGGFAW 71

Query: 199 NFFFNNDAQKTY-QNLGKWSNLCTPHSIIPTLATVHPQ 235
                        +       +    + +  L   HP 
Sbjct: 72  QVALRLAGASGTPKPRFGHGVVTELGAGVRLLGCYHPS 109


>gi|148992707|ref|ZP_01822350.1| pneumococcal surface protein A [Streptococcus pneumoniae SP9-BS68]
 gi|147928433|gb|EDK79448.1| pneumococcal surface protein A [Streptococcus pneumoniae SP9-BS68]
          Length = 746

 Score = 37.8 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 8/68 (11%), Positives = 16/68 (23%), Gaps = 3/68 (4%)

Query: 8   SQEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQA 67
           +Q+++        + G     +E    A    Q           P             + 
Sbjct: 419 TQKELDAALN---ELGPDGDEEELPARALQPEQPAPAPKPEQPTPAPKPEQPTPAPKPEQ 475

Query: 68  DSIAQKAC 75
            + A K  
Sbjct: 476 PAPAPKPE 483


>gi|289761411|ref|ZP_06520789.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
 gi|289708917|gb|EFD72933.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
          Length = 133

 Score = 37.8 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 28/98 (28%), Gaps = 4/98 (4%)

Query: 141 QSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIE--LISPKILLFIGNKTK 198
            +  +   +I I+      PPGN   +  E   C P +  +        + ++ +G    
Sbjct: 9   AADGLRANRIRITAPVRCAPPGNS-PTPAERLTCSPWLNAEWRLVSDHIRAIVALGGFAW 67

Query: 199 NFFFNNDAQKTY-QNLGKWSNLCTPHSIIPTLATVHPQ 235
                        +       +    + +  L   HP 
Sbjct: 68  QVALRLAGASGTPKPRFGHGVVTELGAGVRLLGCYHPS 105


>gi|126173819|ref|YP_001049968.1| phage SPO1 DNA polymerase domain-containing protein [Shewanella
           baltica OS155]
 gi|125997024|gb|ABN61099.1| phage SPO1 DNA polymerase domain protein [Shewanella baltica OS155]
          Length = 209

 Score = 37.8 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 41/137 (29%), Gaps = 19/137 (13%)

Query: 82  SLLRSFHDCHLCST----SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
           +LL   + C LC      +   I    +    ++I G  P    +  G PF   +G  L 
Sbjct: 3   ALLTKINACTLCQADLPLAPKPIL-QASSQARILIAGQAPGVKTHHKGIPFDDASGERLR 61

Query: 138 KML---QSIEIMRTQIHISMISPWHP---------PGNRNLSNIEMEICRPIIMRQIELI 185
             L   +          I  +    P          G++             ++    + 
Sbjct: 62  TWLNVTREQFYDPALFAIVPMGFCFPGSIEKNGKKQGDKPPRPECAATWHQALLA--LMP 119

Query: 186 SPKILLFIGNKTKNFFF 202
             ++++ +G    ++  
Sbjct: 120 QIELMVILGQYAIDYHL 136


>gi|126728642|ref|ZP_01744457.1| alpha amylase protein [Sagittula stellata E-37]
 gi|126710572|gb|EBA09623.1| alpha amylase protein [Sagittula stellata E-37]
          Length = 544

 Score = 37.8 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 44/125 (35%), Gaps = 17/125 (13%)

Query: 1   MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPIT 54
           +TS+  L+      Q+ +L +  F+ D GV     +  N   ++ + +        +   
Sbjct: 170 LTSQPDLNFHCPEVQDALLEVVRFWLDRGVDGFRLDTINFYVHDQELRSNPPLPPERRDD 229

Query: 55  NIRHIHSPLVQQ----ADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
           +I    +P   Q    + +  +    L   ++LL  +          + +       + L
Sbjct: 230 SIAPKVNPYNHQEHIYSKNRPENIAFLERFRALLDEYEG-------KTAVGEVGDAQRGL 282

Query: 111 MIIGY 115
            I+G 
Sbjct: 283 EIMGE 287


>gi|288958191|ref|YP_003448532.1| two-component hybrid sensor and regulator [Azospirillum sp. B510]
 gi|288910499|dbj|BAI71988.1| two-component hybrid sensor and regulator [Azospirillum sp. B510]
          Length = 1138

 Score = 37.8 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 23/69 (33%), Gaps = 2/69 (2%)

Query: 20   ADSGVYWVFDEPNN--EATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSL 77
             ++G+     +P N  +      R    +       T      SP  + A+     A  +
Sbjct: 972  LEAGMDDYLSKPINARKLLDAIARFVPPVADTPADATGRTASPSPPAEAAEPAIINAEKI 1031

Query: 78   HELKSLLRS 86
             EL+  L +
Sbjct: 1032 EELRDALGA 1040


>gi|195385005|ref|XP_002051199.1| GJ14685 [Drosophila virilis]
 gi|194147656|gb|EDW63354.1| GJ14685 [Drosophila virilis]
          Length = 826

 Score = 37.4 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 30/251 (11%), Positives = 54/251 (21%), Gaps = 46/251 (18%)

Query: 20  ADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHE 79
            DS V      P    +  S +       A   +++     +P      +   +      
Sbjct: 600 QDSLVEAAEVAPVEAVSLSSAKPTPVAPVAPAALSSTPPASAPAKSTRPAPIVRPAQ--- 656

Query: 80  LKSLLRSFHDCHLCSTSLSTICATQTEGQDLMI-IGYTPSDSDNISGKPFSGKTGNMLDK 138
                    DC  C T   T+          MI  G  P                N  DK
Sbjct: 657 -----YQCEDCSKCFT---TV---GALRIHKMIHTGELPHKC-------------NYCDK 692

Query: 139 MLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTK 198
             ++   +R                 +L     E     + R I +   K      N   
Sbjct: 693 RFRTPGQVRVHQRRHTGEKPFKCKVCSLDFTHRETLISHLSRHIGMKRYKCYGCDKNFVV 752

Query: 199 NFFFNNDAQKTYQNLGKW-SNLCTPHSIIPTL---ATV--HPQ---ELIQYPLIKKNTWH 249
                   +      GK           +  +        HP+     ++          
Sbjct: 753 VSGLRAHRRLRPDTCGKVKFTARAHGPRVRVIRGEVVFESHPEHNGY-LRS--------E 803

Query: 250 ALITLKKALKN 260
             + +   +  
Sbjct: 804 DPLNIMSEINQ 814


>gi|221128051|ref|XP_002155481.1| PREDICTED: similar to CG14934 CG14934-PA [Hydra magnipapillata]
          Length = 550

 Score = 37.4 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/238 (10%), Positives = 56/238 (23%), Gaps = 37/238 (15%)

Query: 1   MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPIT 54
           +TS+  L+      Q+ +L    F+ + GV     +  N   +++Q ++           
Sbjct: 169 LTSQPDLNFHNPEVQDALLATVKFWLELGVDGYRLDTANFYFHDAQLRDNPARGRPDGED 228

Query: 55  NIRHIHSP----LVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
              +  +P      Q   S  +    L  L++LL                     E  + 
Sbjct: 229 PAVNAVNPYGWQWHQHDKSQPENLAFLRRLRALL--------------------DEYPNT 268

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNM-LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI 169
            ++G    D        ++     + +      +    T  H                  
Sbjct: 269 TMVGEIGDDDGLARVAEYTSGGDKLHMAYCFDLLGTAHTAAHFRSFVK-RFEEVAPGGWP 327

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227
              +    ++R                         A       G           +P
Sbjct: 328 CWALSNHDVVRVAS-----RWGTTAPTASPALLRLGAALQMSLRGSPCIYQGDELGLP 380


>gi|260222661|emb|CBA32444.1| Probable alpha-glucosidase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 568

 Score = 37.4 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/238 (10%), Positives = 56/238 (23%), Gaps = 37/238 (15%)

Query: 1   MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPIT 54
           +TS+  L+      Q+ +L    F+ + GV     +  N   +++Q ++           
Sbjct: 187 LTSQPDLNFHNPEVQDALLATVKFWLELGVDGYRLDTANFYFHDAQLRDNPARGRPDGED 246

Query: 55  NIRHIHSP----LVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
              +  +P      Q   S  +    L  L++LL                     E  + 
Sbjct: 247 PAVNAVNPYGWQWHQHDKSQPENLAFLRRLRALL--------------------DEYPNT 286

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNM-LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNI 169
            ++G    D        ++     + +      +    T  H                  
Sbjct: 287 TMVGEIGDDDGLARVAEYTSGGDKLHMAYCFDLLGTAHTAAHFRSFVK-RFEEVAPGGWP 345

Query: 170 EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227
              +    ++R                         A       G           +P
Sbjct: 346 CWALSNHDVVRVAS-----RWGTTAPTASPALLRLGAALQMSLRGSPCIYQGDELGLP 398


>gi|271968005|ref|YP_003342201.1| G:T/U mismatch-specific DNA glycosylase-like protein
           [Streptosporangium roseum DSM 43021]
 gi|270511180|gb|ACZ89458.1| G:T/U mismatch-specific DNA glycosylase-like protein
           [Streptosporangium roseum DSM 43021]
          Length = 208

 Score = 37.4 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/164 (11%), Positives = 37/164 (22%), Gaps = 28/164 (17%)

Query: 57  RHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSL-STICATQTEGQDLMIIGY 115
                P+      +     +  EL +                  +        D++  G 
Sbjct: 14  AEPSVPVPPDGPRVKAVPPTRAELDAA----------RGRTLKDVLG---PSLDVLFCGI 60

Query: 116 TPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH-------------ISMISPWHPPG 162
            P      +G  F+ + GN     L         +              I+ +       
Sbjct: 61  NPGLYSAATGHHFA-RPGNRFWPALHRSGFTPRLLDPAEQDLLPSFGLGITNVVERASAQ 119

Query: 163 NRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206
              L+  E       + R +    P++L   G       F    
Sbjct: 120 AAELTPEEFREGGARLARLVAGTRPRVLAVAGVTAYRTAFGQPK 163


>gi|115668672|ref|XP_791344.2| PREDICTED: similar to G/T mismatch-specific thymine DNA glycosylase
           [Strongylocentrotus purpuratus]
 gi|115931630|ref|XP_001192253.1| PREDICTED: similar to G/T mismatch-specific thymine DNA glycosylase
           [Strongylocentrotus purpuratus]
          Length = 588

 Score = 37.4 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 33/115 (28%), Gaps = 3/115 (2%)

Query: 45  SIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHE--LKSLLRSFHDCHLCSTSLSTICA 102
                IQ  +          ++     Q A  L E   +  +  F+          T+  
Sbjct: 11  PPPPVIQTPSPDPQQQQKPGKKPKQEKQTADKLKEKKPRRKVDRFNGMPEEEVVKRTLPD 70

Query: 103 TQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP 157
                 D++IIG  P       G  ++G  GN   K L    ++   +       
Sbjct: 71  ILVHNLDIVIIGINPGLMAAYKGHHYAGP-GNHFWKCLYLSGLVPEPMTCMDDVK 124


>gi|218663655|ref|ZP_03519585.1| alpha-glucosidase protein [Rhizobium etli IE4771]
          Length = 550

 Score = 37.4 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 17/136 (12%), Positives = 45/136 (33%), Gaps = 12/136 (8%)

Query: 1   MTSKRILSQEQ------ILTIALFYADSGVYWVFDEPNNEATYES-QRKEKSIDSAIQPI 53
           +TS+  ++         +L +  F+ + GV     +  N   ++   R   ++    +  
Sbjct: 175 LTSQPDMNLHNPEVQDRLLDVVRFWLNRGVDGFRLDTINFYFHDPLLRNNPALAPERRNA 234

Query: 54  TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113
           +    ++    Q+      +  +L  LK       +      +++ +       + L I+
Sbjct: 235 STAPAVNPYNFQEHVYDKNRPENLAFLKRFRAVLEEYP----AIAAVGEVGDSQRGLEIV 290

Query: 114 GY-TPSDSDNISGKPF 128
           G  T  +        F
Sbjct: 291 GEYTSGNDKMHMCYAF 306


>gi|149912695|ref|ZP_01901229.1| DNA polymerase I [Roseobacter sp. AzwK-3b]
 gi|149813101|gb|EDM72927.1| DNA polymerase I [Roseobacter sp. AzwK-3b]
          Length = 938

 Score = 37.4 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 21/201 (10%), Positives = 51/201 (25%), Gaps = 5/201 (2%)

Query: 15  IALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKA 74
           +  F A+     +     +    E      +  +   P         P +       +  
Sbjct: 277 LLAFLAEMEFRTLSKRIADSLGAEPPVIPDTNPAGANPTEGDAAPDWPAID--PDSYEHV 334

Query: 75  CSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYT--PSDSDNISGKPFSGKT 132
             +  L++ +       L +    T  +       L+ I     P  +  I  +   G +
Sbjct: 335 RDMEALEAWIAHIQARGLVAVDTETT-SLNEMQAALVGISLAVEPGRACYIPLRHTEGAS 393

Query: 133 GNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLF 192
           G++      +   +     +  + P             M+    I  R    ++P     
Sbjct: 394 GDLFSSDALAEGQLDLDAVLGALKPMLEDDAILKIGQNMKYDAKIFARHGIRVAPFDDTM 453

Query: 193 IGNKTKNFFFNNDAQKTYQNL 213
           + +   N   +     T    
Sbjct: 454 LMSYALNAGIHGHGMDTLSER 474


>gi|320162576|ref|YP_004175801.1| hypothetical protein ANT_31770 [Anaerolinea thermophila UNI-1]
 gi|319996430|dbj|BAJ65201.1| hypothetical protein ANT_31770 [Anaerolinea thermophila UNI-1]
          Length = 241

 Score = 37.4 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 32/107 (29%), Gaps = 9/107 (8%)

Query: 134 NMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE--MEICRPIIMRQIELISPKILL 191
                 L          HI            + S      + C+  I  +IE++ P IL+
Sbjct: 107 KKFKPNLDIQSSHLYFAHI-NTVKCCVCNKNHASAPVILFKNCQRYIWGEIEILKPDILI 165

Query: 192 FIGNKTKNFF---FN-NDAQKTYQNLGKWSNLCTPHSIIPTLATVHP 234
             G + +      F   +++       +W  +      +    T HP
Sbjct: 166 TQGKRAREALKEVFGIFESEDCSLCRSQW--IRLGEKSVLWFPTYHP 210


>gi|1378107|gb|AAC50540.1| G/T mismatch-specific thymine DNA glycosylase [Homo sapiens]
          Length = 410

 Score = 37.0 bits (84), Expect = 2.3,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 43/126 (34%), Gaps = 3/126 (2%)

Query: 26  WVFDEPNNEATYESQRKEKSIDS--AIQPITNIRHIHSPLVQQADSIAQKACSLHELKSL 83
               EP  EA    +RK ++ +    ++P   +    S    +     +K     ++K  
Sbjct: 48  APAQEPVQEAPKGRKRKPRTTEPKQPVEPKKPVESKKSGKSAKPKEKQEKITDTFKVKRK 107

Query: 84  LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143
           +  F+          T+    T   D++IIG  P       G  + G  GN   K L   
Sbjct: 108 VDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGP-GNHFWKCLFMS 166

Query: 144 EIMRTQ 149
            +   Q
Sbjct: 167 GLSEVQ 172


>gi|307719182|ref|YP_003874714.1| oligo-1,6-glucosidase [Spirochaeta thermophila DSM 6192]
 gi|306532907|gb|ADN02441.1| oligo-1,6-glucosidase [Spirochaeta thermophila DSM 6192]
          Length = 546

 Score = 37.0 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 20/201 (9%), Positives = 50/201 (24%), Gaps = 37/201 (18%)

Query: 9   QEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQAD 68
           +E++  +  ++ D G+                 K        +   +     +P      
Sbjct: 173 REELYRMVNWWLDKGIDGF-----RLDAISVISKHPDFPDGDEVGPDGLAPGTPYFMNGP 227

Query: 69  SIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPF 128
            + +    L EL      +  C                G+DL+ +G       +      
Sbjct: 228 HLGEY---LEEL------YRRC--------------FHGRDLLTVGECAGVHPDDLP-HL 263

Query: 129 SGKTGNM-----LDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICR---PIIMR 180
            G    +     +D M   +     +       PW     + +     +       +   
Sbjct: 264 VGDDKALKSIFFMDHMFLDLGPDGYRFGNPYPYPWRWSQFKRIVYTWYKAFSRAGWMSFY 323

Query: 181 QIELISPKILLFIGNKTKNFF 201
                 P+ +   G   +++ 
Sbjct: 324 LGNHDFPRCISRFGCDGEHWL 344


>gi|254448669|ref|ZP_05062127.1| hypothetical protein GP5015_517 [gamma proteobacterium HTCC5015]
 gi|198261677|gb|EDY85964.1| hypothetical protein GP5015_517 [gamma proteobacterium HTCC5015]
          Length = 248

 Score = 37.0 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 28/233 (12%), Positives = 55/233 (23%), Gaps = 40/233 (17%)

Query: 29  DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIA-QKACSLHELKSLLRSF 87
           + P  E          S    +          +P  QQ +    +   +   L   L S 
Sbjct: 53  EAPEAEQGEHHLVVRPSGRQPVPNEALGAEETAPKRQQPEDTPQETPSTPLPLDLQLASL 112

Query: 88  HDCHLCSTSLSTICATQTEGQDLMII-GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM 146
            D                    ++I+ G    D     G P+ G+   +   M+++    
Sbjct: 113 PDFPQRQ------------QGRVLIVCGEAEGDEG--QGDPYEGELAQLFSDMIKATRWT 158

Query: 147 RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDA 206
              + +                           RQ    +   ++    +          
Sbjct: 159 PEMVVL--------------------ASHATPARQAIQATGADVIMGFGRAACRELWGVG 198

Query: 207 QKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALK 259
                  G+      P      +AT HP   +     K+  W  +    + L 
Sbjct: 199 ALPEHLRGR----AVPLFGAQAIATHHPILALADASFKRPIWEDIKRAIEVLA 247


>gi|116494208|ref|YP_805942.1| Uracil-DNA glycosylase [Lactobacillus casei ATCC 334]
 gi|191637537|ref|YP_001986703.1| hypothetical protein LCABL_07200 [Lactobacillus casei BL23]
 gi|116104358|gb|ABJ69500.1| Uracil-DNA glycosylase [Lactobacillus casei ATCC 334]
 gi|190711839|emb|CAQ65845.1| Putative uncharacterized protein ysiD [Lactobacillus casei BL23]
 gi|327381583|gb|AEA53059.1| hypothetical protein LC2W_0725 [Lactobacillus casei LC2W]
 gi|327384749|gb|AEA56223.1| hypothetical protein LCBD_0725 [Lactobacillus casei BD-II]
          Length = 193

 Score = 37.0 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/137 (10%), Positives = 38/137 (27%), Gaps = 9/137 (6%)

Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRN 165
               ++I    P      +   ++  +G+ L   +   +          + P        
Sbjct: 33  PEATILIASQAPGRKAQTTKTYWNDPSGDRLRTWMGVTKDQFYHSGKIAVLPLDFYYPGK 92

Query: 166 LSNIEMEICRPIIMR-----QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220
             + ++   +    +        +   ++ + IG   + ++     +KT     K     
Sbjct: 93  GKSGDLPPRKDFAAKWHPSLLALMPKIQLTIVIGAYAQKYYLRKRREKTLTATVKNFRAY 152

Query: 221 TPHSIIPTLATVHPQEL 237
            P         VHP  L
Sbjct: 153 LPDY----FPIVHPSPL 165


>gi|258507636|ref|YP_003170387.1| uracil-DNA glycosylase [Lactobacillus rhamnosus GG]
 gi|257147563|emb|CAR86536.1| Uracil-DNA glycosylase [Lactobacillus rhamnosus GG]
 gi|259648985|dbj|BAI41147.1| uracil-DNA glycosylase [Lactobacillus rhamnosus GG]
          Length = 193

 Score = 37.0 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/137 (10%), Positives = 38/137 (27%), Gaps = 9/137 (6%)

Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRN 165
               ++I    P      +   ++  +G+ L   +   +          + P        
Sbjct: 33  PDATILIASQAPGRKAQTTKTYWNDPSGDRLRTWMGVTKDQFYHSGKIAVLPLDFYYPGK 92

Query: 166 LSNIEMEICRPIIMR-----QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220
             + ++   +    +        +   ++ + IG   + ++     +KT     K     
Sbjct: 93  GKSGDLPPRKDFAAKWHPSLLALMPHIQLTIVIGAYAQKYYLGKRREKTLTATVKNFRAY 152

Query: 221 TPHSIIPTLATVHPQEL 237
            P         VHP  L
Sbjct: 153 LPTY----FPIVHPSPL 165


>gi|199596981|ref|ZP_03210414.1| Uracil-DNA glycosylase [Lactobacillus rhamnosus HN001]
 gi|199592114|gb|EDZ00188.1| Uracil-DNA glycosylase [Lactobacillus rhamnosus HN001]
          Length = 193

 Score = 37.0 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/137 (10%), Positives = 38/137 (27%), Gaps = 9/137 (6%)

Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRN 165
               ++I    P      +   ++  +G+ L   +   +          + P        
Sbjct: 33  PDATILIASQAPGRKAQTTKTYWNDPSGDRLRTWMGVTKDQFYHSGKIAVLPLDFYYPGK 92

Query: 166 LSNIEMEICRPIIMR-----QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220
             + ++   +    +        +   ++ + IG   + ++     +KT     K     
Sbjct: 93  GKSGDLPPRKDFAAKWHPSLLALMPHIQLTIVIGAYAQKYYLGKRREKTLTATVKNFRAY 152

Query: 221 TPHSIIPTLATVHPQEL 237
            P         VHP  L
Sbjct: 153 LPTY----FPIVHPSPL 165


>gi|317123372|ref|YP_004097484.1| hypothetical protein Intca_0199 [Intrasporangium calvum DSM 43043]
 gi|315587460|gb|ADU46757.1| hypothetical protein Intca_0199 [Intrasporangium calvum DSM 43043]
          Length = 307

 Score = 37.0 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 9/56 (16%), Positives = 23/56 (41%), Gaps = 2/56 (3%)

Query: 99  TICATQ--TEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHI 152
            +           +++IG  P+  + IS +   G+ G  +  +L  + I  + + +
Sbjct: 39  PVFHRGRLDGSARVLVIGQDPATHEAISRRVLVGEAGQRVQGLLARLGITHSYVML 94


>gi|229553664|ref|ZP_04442389.1| uracil-DNA glycosylase [Lactobacillus rhamnosus LMS2-1]
 gi|258538807|ref|YP_003173306.1| uracil-DNA glycosylase [Lactobacillus rhamnosus Lc 705]
 gi|229312941|gb|EEN78914.1| uracil-DNA glycosylase [Lactobacillus rhamnosus LMS2-1]
 gi|257150483|emb|CAR89455.1| Uracil-DNA glycosylase [Lactobacillus rhamnosus Lc 705]
          Length = 193

 Score = 37.0 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 15/137 (10%), Positives = 38/137 (27%), Gaps = 9/137 (6%)

Query: 106 EGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRN 165
               ++I    P      +   ++  +G+ L   +   +          + P        
Sbjct: 33  PDATILIASQAPGRKAQTTKTYWNDPSGDRLRTWMGVTKDQFYHSGKIAVLPLDFYYPGK 92

Query: 166 LSNIEMEICRPIIMR-----QIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLC 220
             + ++   +    +        +   ++ + IG   + ++     +KT     K     
Sbjct: 93  GKSGDLPPRKDFAAKWHPSLLALMPHIQLTIVIGAYAQKYYLGKRREKTLTATVKNFRAY 152

Query: 221 TPHSIIPTLATVHPQEL 237
            P         VHP  L
Sbjct: 153 LPTY----FPIVHPSPL 165


>gi|331698478|ref|YP_004334717.1| uracil-DNA glycosylase [Pseudonocardia dioxanivorans CB1190]
 gi|326953167|gb|AEA26864.1| Uracil-DNA glycosylase superfamily [Pseudonocardia dioxanivorans
           CB1190]
          Length = 195

 Score = 37.0 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 21/164 (12%), Positives = 39/164 (23%), Gaps = 23/164 (14%)

Query: 84  LRSFHDCHLCSTSLSTI----CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKM 139
              F    L +    TI     A       ++  G  P      +G  F+ + GN    +
Sbjct: 2   ASRFSAAELAAARDRTIDDVLPAPGDPPLRVLFCGINPGLVSAATGHHFA-RPGNRFWPV 60

Query: 140 LQSIEIMRTQIH-------------ISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS 186
           L         +              I+ +          L++ E+      +   +    
Sbjct: 61  LHDAGFTPRLLRPAEQDELRGLGLGITNMVARTTARADELADDELRAGGERLRELVAAER 120

Query: 187 PKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230
           P+ L  +G       F                     + I  L 
Sbjct: 121 PRWLAVVGVTAYRVAFAAPRAAVGP-----QERTLGDTGIWVLP 159


>gi|332840215|ref|XP_003313949.1| PREDICTED: G/T mismatch-specific thymine DNA glycosylase isoform 1
           [Pan troglodytes]
          Length = 406

 Score = 37.0 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 44/126 (34%), Gaps = 3/126 (2%)

Query: 26  WVFDEPNNEATYESQRKEKSIDS--AIQPITNIRHIHSPLVQQADSIAQKACSLHELKSL 83
               EP  EA    +RK ++ +    ++P   +    S    ++    +K     ++K  
Sbjct: 44  APAQEPVQEAPKGRKRKPRTTEPKQPVEPKKPVESKKSGKSARSKEKQEKITDTFKVKRK 103

Query: 84  LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143
           +  F+          T+    T   D++IIG  P       G  + G  GN   K L   
Sbjct: 104 VDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGP-GNHFWKCLFMS 162

Query: 144 EIMRTQ 149
            +   Q
Sbjct: 163 GLSEVQ 168


>gi|332840213|ref|XP_509324.3| PREDICTED: G/T mismatch-specific thymine DNA glycosylase isoform 2
           [Pan troglodytes]
          Length = 410

 Score = 37.0 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 44/126 (34%), Gaps = 3/126 (2%)

Query: 26  WVFDEPNNEATYESQRKEKSIDS--AIQPITNIRHIHSPLVQQADSIAQKACSLHELKSL 83
               EP  EA    +RK ++ +    ++P   +    S    ++    +K     ++K  
Sbjct: 48  APAQEPVQEAPKGRKRKPRTTEPKQPVEPKKPVESKKSGKSARSKEKQEKITDTFKVKRK 107

Query: 84  LRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI 143
           +  F+          T+    T   D++IIG  P       G  + G  GN   K L   
Sbjct: 108 VDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGP-GNHFWKCLFMS 166

Query: 144 EIMRTQ 149
            +   Q
Sbjct: 167 GLSEVQ 172


>gi|282856433|ref|ZP_06265712.1| peptidase U32 [Pyramidobacter piscolens W5455]
 gi|282585804|gb|EFB91093.1| peptidase U32 [Pyramidobacter piscolens W5455]
          Length = 819

 Score = 37.0 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 25/81 (30%), Gaps = 3/81 (3%)

Query: 9   QEQILTIALFYADSGVYWVF--DEPNNEATYESQRKEKSIDSAIQPITNIRHIH-SPLVQ 65
             ++     F +++GV  +   D            +     S    ITN      +    
Sbjct: 76  MRELADYLAFLSNAGVDAIIVQDLGVLRLARLVASELPRHASTQMTITNSAGARFAGDCG 135

Query: 66  QADSIAQKACSLHELKSLLRS 86
              ++  +  SL +L++    
Sbjct: 136 MVRAVPARELSLADLRAAAAE 156


>gi|167535609|ref|XP_001749478.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163772106|gb|EDQ85763.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1903

 Score = 37.0 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 32/99 (32%), Gaps = 12/99 (12%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHEL-----KSLL- 84
           P+     ++++K  +     + +        P+  +A   A    S+  L     + ++ 
Sbjct: 322 PSRSKRTKTEQKSGAHHPNAESLRAEEQPSEPVDLEATDAADAEPSIESLPVEGGRDIVQ 381

Query: 85  ------RSFHDCHLCSTSLSTICATQTEGQDLMIIGYTP 117
                  +   CH  S+    +       Q + +I   P
Sbjct: 382 IEVNSEATCAICHCKSSMQEMVVCNGDCDQRVHLICVQP 420


>gi|254409348|ref|ZP_05023129.1| Alpha amylase, catalytic domain subfamily, putative [Microcoleus
           chthonoplastes PCC 7420]
 gi|196183345|gb|EDX78328.1| Alpha amylase, catalytic domain subfamily, putative [Microcoleus
           chthonoplastes PCC 7420]
          Length = 598

 Score = 36.6 bits (83), Expect = 3.0,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 34/86 (39%), Gaps = 7/86 (8%)

Query: 3   SKRILSQE------QILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNI 56
           S+  L+         IL  A F+ D G+     +  N   +++Q ++  +      + + 
Sbjct: 205 SQPDLNWHNPEVVDAILVRAKFWLDLGIDGFRIDAPNFFMHDAQLRDNPVRPEDASLPDG 264

Query: 57  RHIHSPLVQQA-DSIAQKACSLHELK 81
               +P+V+Q       +  +L  LK
Sbjct: 265 VAPDNPVVRQLFKYNFCRPETLDALK 290


>gi|254414338|ref|ZP_05028105.1| Alpha amylase, catalytic domain subfamily, putative [Microcoleus
           chthonoplastes PCC 7420]
 gi|196179013|gb|EDX74010.1| Alpha amylase, catalytic domain subfamily, putative [Microcoleus
           chthonoplastes PCC 7420]
          Length = 573

 Score = 36.6 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 27/74 (36%), Gaps = 1/74 (1%)

Query: 9   QEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQ-A 67
           ++ IL +A F+ D GV     +  N   ++ Q ++       +        H P   Q  
Sbjct: 202 RQAILDVARFWLDMGVDGFRLDVVNFFAHDRQLRDNPPRPKNRKRPAGADAHDPFFSQWN 261

Query: 68  DSIAQKACSLHELK 81
                +  +L  L+
Sbjct: 262 KYNFCQPETLEFLE 275


>gi|317121348|ref|YP_004101351.1| 5-formyltetrahydrofolate cyclo-ligase [Thermaerobacter marianensis
           DSM 12885]
 gi|315591328|gb|ADU50624.1| 5-formyltetrahydrofolate cyclo-ligase [Thermaerobacter marianensis
           DSM 12885]
          Length = 426

 Score = 36.6 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 22/186 (11%), Positives = 56/186 (30%), Gaps = 24/186 (12%)

Query: 31  PNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDC 90
           P +                       +       +  +   Q    L EL++L       
Sbjct: 196 PVDPHDLSVDVVVTPDQVIRTRTPYPKPRGIRWEEVTEEDLQAMPVLRELRAL------- 248

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI----- 145
            L       +      G   + +G  P  +   +G  F+G   N+  ++L          
Sbjct: 249 -LWERMT--VPEVLVPGLAAVFVGLNPGRASATAGHHFAGPN-NLFWRLLHEAGFVPRVL 304

Query: 146 --------MRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197
                    R  + ++ + P    G  +L+  E+     ++  ++  + P++++ +G + 
Sbjct: 305 RPEEDGLLPRWGLGVTNVVPRATQGEADLTWDELAAGGAVLREKMARVRPRLVVLLGKQV 364

Query: 198 KNFFFN 203
              +  
Sbjct: 365 YRAYAG 370


>gi|302540417|ref|ZP_07292759.1| G/U mismatch-specific DNA glycosylase [Streptomyces hygroscopicus
           ATCC 53653]
 gi|302458035|gb|EFL21128.1| G/U mismatch-specific DNA glycosylase [Streptomyces himastatinicus
           ATCC 53653]
          Length = 185

 Score = 36.6 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 43/153 (28%), Gaps = 19/153 (12%)

Query: 91  HLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQI 150
            L +     +     +G  ++  G  P      +G  F+ + GN    +L +       +
Sbjct: 7   ELEAARDRIVPDVVGDGLRVLFCGINPGLMTAATGHHFA-RPGNRFWPVLHASGFTPRLL 65

Query: 151 H-------------ISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKT 197
           H             I+ +          L++ E      I+  ++  + P+ L   G   
Sbjct: 66  HPSEQGELPSYGLGITNVVARASARADELTDEEYREGGRILEEKVRRLRPRWLAVAGVTA 125

Query: 198 KNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLA 230
               F +   K               + I  L 
Sbjct: 126 YRVAFGDKRAKIGP-----QERTIGGTRIWALP 153


>gi|146280602|ref|YP_001170755.1| uracil-DNA glycosylase [Pseudomonas stutzeri A1501]
 gi|145568807|gb|ABP77913.1| probable uracil-DNA glycosylase [Pseudomonas stutzeri A1501]
          Length = 223

 Score = 36.6 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 15/117 (12%), Positives = 27/117 (23%), Gaps = 7/117 (5%)

Query: 78  HELKSLLRSFHDCHLCSTSL------STICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
             L+ L            +         I         L   G  P   +   G+PF G 
Sbjct: 7   QALRDLAADTDGIDTAIYATYERDPLEPIIGLGDADAPLCFFGRDPGREEVRHGEPFIGS 66

Query: 132 TGNMLDKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP 187
            G ++ ++L             +  +        N    +    +   M       P
Sbjct: 67  GGQIVRRVLYRHLHGAEMPDFEAGRALGRHYFWINTVPYKPIGNKAWSMAVKRCFQP 123


>gi|120537422|gb|AAI29089.1| Thymine-DNA glycosylase [Rattus norvegicus]
          Length = 385

 Score = 36.6 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 3/128 (2%)

Query: 24  VYWVFDEPNNEATYESQRKEKSIDS--AIQPITNIRHIHSPLVQQADSIAQKACSLHELK 81
                 +P  EA    +RK ++ ++   ++P        S    ++    +K     ++K
Sbjct: 18  AEAPAQDPVPEAPKRRKRKTRAAEAQDPVEPKKPAASKKSGKSTKSKEKQEKITDTFKVK 77

Query: 82  SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
             +  F+          T+    T   D++IIG  P       G  + G  GN   K L 
Sbjct: 78  RKVDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGP-GNHFWKCLF 136

Query: 142 SIEIMRTQ 149
              +   Q
Sbjct: 137 MSGLSEVQ 144


>gi|16758544|ref|NP_446181.1| G/T mismatch-specific thymine DNA glycosylase [Rattus norvegicus]
 gi|13027783|gb|AAK08978.1| T:G mismatch thymine glycosylase [Rattus norvegicus]
          Length = 386

 Score = 36.6 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 3/128 (2%)

Query: 24  VYWVFDEPNNEATYESQRKEKSIDS--AIQPITNIRHIHSPLVQQADSIAQKACSLHELK 81
                 +P  EA    +RK ++ ++   ++P        S    ++    +K     ++K
Sbjct: 18  AEAPAQDPVPEAPKRRKRKTRAAEAQDPVEPKKPAASKKSGKSTKSKEKQEKITDTFKVK 77

Query: 82  SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
             +  F+          T+    T   D++IIG  P       G  + G  GN   K L 
Sbjct: 78  RKVDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGP-GNHFWKCLF 136

Query: 142 SIEIMRTQ 149
              +   Q
Sbjct: 137 MSGLSEVQ 144


>gi|149067325|gb|EDM17058.1| thymine-DNA glycosylase, isoform CRA_b [Rattus norvegicus]
          Length = 386

 Score = 36.6 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 3/128 (2%)

Query: 24  VYWVFDEPNNEATYESQRKEKSIDS--AIQPITNIRHIHSPLVQQADSIAQKACSLHELK 81
                 +P  EA    +RK ++ ++   ++P        S    ++    +K     ++K
Sbjct: 18  AEAPAQDPVPEAPKRRKRKTRAAEAQDPVEPKKPAASKKSGKSTKSKEKQEKITDTFKVK 77

Query: 82  SLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQ 141
             +  F+          T+    T   D++IIG  P       G  + G  GN   K L 
Sbjct: 78  RKVDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGP-GNHFWKCLF 136

Query: 142 SIEIMRTQ 149
              +   Q
Sbjct: 137 MSGLSEVQ 144


>gi|160874725|ref|YP_001554041.1| phage SPO1 DNA polymerase domain-containing protein [Shewanella
           baltica OS195]
 gi|160860247|gb|ABX48781.1| phage SPO1 DNA polymerase domain protein [Shewanella baltica OS195]
 gi|315266966|gb|ADT93819.1| Uracil-DNA glycosylase superfamily [Shewanella baltica OS678]
          Length = 232

 Score = 36.6 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 30/233 (12%), Positives = 59/233 (25%), Gaps = 62/233 (26%)

Query: 82  SLLRSFHDCHLCST----SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
           +LL   + C LC      +   I    +    ++I G  P    +  G PF   +G  L 
Sbjct: 3   ALLTKINACTLCQADLPLAPKPIL-QASSQARILIAGQAPGVKTHHKGIPFDDASGERLR 61

Query: 138 KML---QSIEIMRTQIHISMISPWHP---------PGNRNLSNIEMEICRPIIMRQIEL- 184
             L   +          I  +    P          G++             ++  +   
Sbjct: 62  TWLNVTREQFYDPALFAIVPMGFCFPGSIEKNGKKQGDKPPRPECAATWHQALLALMPQI 121

Query: 185 -----------------------------ISPK--ILLFIGNKTKNFFFNNDAQKTYQNL 213
                                          P+   +    +               Q  
Sbjct: 122 ELIVILGQYAIDYHLPRESSVAINLTSPLTKPQTTHINVSSSAKAKTIPKLKPITVTQAC 181

Query: 214 GKWSNLCTPHSIIPTLATVHPQ-----ELIQYPLIKKNTWHALITLKKALKNL 261
            +W      + ++P     HP       L Q+P  +++    L  L+  + +L
Sbjct: 182 AQWQQYWPKYFVLP-----HPSPRNNLWLKQHPEFERDM---LPRLRMRIASL 226


>gi|319944574|ref|ZP_08018843.1| maltodextrose utilization protein MalA [Lautropia mirabilis ATCC
           51599]
 gi|319742170|gb|EFV94588.1| maltodextrose utilization protein MalA [Lautropia mirabilis ATCC
           51599]
          Length = 550

 Score = 36.3 bits (82), Expect = 3.9,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 53/189 (28%), Gaps = 16/189 (8%)

Query: 9   QEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQA- 67
           Q+ +L    F+ + GV     +  N   +     +    S            +P   Q  
Sbjct: 188 QDALLADMRFWLELGVDGFRLDTVNFYFHSQTLHDNPPQSRRGKAIPEADRVNPYTWQRH 247

Query: 68  ---DSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNIS 124
               +  +    L  L++LL  F D        +T+     +    +I  YT        
Sbjct: 248 LYDKTQPENLAFLKRLRALLDQFPD-------TTTVGEVGADNALEVIAQYTADGDKLHM 300

Query: 125 GKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIEL 184
              F     ++L +   +  + +       I     P     ++    I      +Q   
Sbjct: 301 AYSF-----DLLHEHHSAEYLHQVFGKFGRIVKDGWPSWAISNHDCPRIRTRWGGQQGGE 355

Query: 185 ISPKILLFI 193
              ++   +
Sbjct: 356 AVARLAAAM 364


>gi|325001865|ref|ZP_08122977.1| G/U mismatch-specific DNA glycosylase [Pseudonocardia sp. P1]
          Length = 186

 Score = 36.3 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 15/118 (12%), Positives = 33/118 (27%), Gaps = 14/118 (11%)

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIH--------- 151
                    ++  G  P      +G  F+ + GN    +L         +          
Sbjct: 23  PGPGDPPLRVLFCGINPGLVSAATGHHFA-RPGNRFWPVLHGSGFTPRLLTPAEQGELAG 81

Query: 152 ----ISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
               I+ ++P        L++ E+      +   +   +P+ L  +G       F   
Sbjct: 82  LGLGITNMAPRATARADELTDDELVAGGEHLRTLVGARAPRWLAVVGIGAYRTAFGRR 139


>gi|114705727|ref|ZP_01438630.1| probable alpha-glucosidase protein [Fulvimarina pelagi HTCC2506]
 gi|114538573|gb|EAU41694.1| probable alpha-glucosidase protein [Fulvimarina pelagi HTCC2506]
          Length = 558

 Score = 36.3 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 21/222 (9%), Positives = 48/222 (21%), Gaps = 27/222 (12%)

Query: 9   QEQILTIALFYADSGVYWVFDEPNNEATYESQ-RKEKSIDSAIQPITNIRHIHSPLVQQA 67
           +  +L    F+ + GV     +  N   ++++ R    +  A++  T          Q  
Sbjct: 196 RSALLGEMRFWLERGVDGFRLDTANFYFHDAELRDNPPLPEAMRSETYASRADPYNFQHH 255

Query: 68  DSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKP 127
                +  +L  LK                  +            +G     +  I    
Sbjct: 256 VHDRNRPENLDFLKE-------------MRQVLDEYGAVA-----VGEIGERTTGIEMMG 297

Query: 128 FSGKTGNMLDKM--LQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELI 185
                G+ L      + +     +                            ++R     
Sbjct: 298 EYTSGGDKLQMCYAFEFLSGAIPEPQTIRGVIERFDAAGPDGWACWAFSNHDVVRHASR- 356

Query: 186 SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227
                   G + ++      A       G           +P
Sbjct: 357 -----WTKGREKRDAILKLAAGILMTLRGSVCIYQGEELGLP 393


>gi|327478879|gb|AEA82189.1| uracil-DNA glycosylase [Pseudomonas stutzeri DSM 4166]
          Length = 226

 Score = 36.3 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 23/221 (10%), Positives = 46/221 (20%), Gaps = 45/221 (20%)

Query: 78  HELKSLLRSFHDCHLCSTSL------STICATQTEGQDLMIIGYTPSDSDNISGKPFSGK 131
             L+ L            +         I         L   G  P   +   G+PF G 
Sbjct: 10  QALRDLAADTDGIDTAIYATYDRDPLEPIIGLGDADAPLCFFGRDPGREEVRHGEPFIGA 69

Query: 132 TGNMLDKMLQSI-EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISP--- 187
            G ++ ++L             +  +        N    +    +   M       P   
Sbjct: 70  GGQIVRRVLYRHLNGAEMPDFEAGRALGRHYFWINTVPYKPIGNKAWSMAVKRRFQPLMR 129

Query: 188 ---------KILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTP---------------- 222
                    + ++ +G      F      +  +   +                       
Sbjct: 130 QLLIDSWHGRHIVTLGR---EAFLWFAIDQPREARQRLEAYWQREDRFTANLDIDLQDAQ 186

Query: 223 --HSIIPTLATVHPQELIQYPLIKKNTWHALITLKKALKNL 261
                       HP   +     K+        L+  L+ L
Sbjct: 187 GLARTFTLHPLPHPSP-LNQTWFKRFP----ALLEARLRQL 222


>gi|195450710|ref|XP_002072599.1| GK13687 [Drosophila willistoni]
 gi|194168684|gb|EDW83585.1| GK13687 [Drosophila willistoni]
          Length = 1761

 Score = 36.3 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 63/180 (35%), Gaps = 20/180 (11%)

Query: 97  LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML-------------QSI 143
             TI     +  D++I+G  P       G  ++G  GN   K L             +  
Sbjct: 762 KRTIPDHLCDNLDIVIVGINPGLFAAYKGHHYAGP-GNHFWKCLYLAGLTQEQMSADEDH 820

Query: 144 EIMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFN 203
           ++++  I  + +      G+ +L+  E++    I++ +++   PK+ +F G      F  
Sbjct: 821 KLIKQGIGFTNMVARATKGSADLTRKEIKEGSRILLEKLQRFRPKVAVFNGKLIFEVFSG 880

Query: 204 NDAQKTYQNLGKWSNLCTPHSIIPTLATVHP--QELIQYPLIKKNTWHALITLKKALKNL 261
                  +   +        + I  + +      +L +    K   + AL   +  L  L
Sbjct: 881 KKEFHFGRQPDRV---EGTDTYIWVMPSSSARCAQLPRA-ADKVPFYAALKKFRDYLNGL 936


>gi|297157455|gb|ADI07167.1| ATP-dependent DNA helicase [Streptomyces bingchenggensis BCW-1]
          Length = 1221

 Score = 36.3 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 18/66 (27%)

Query: 24  VYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSL 83
                D P+++       +      A +          P  ++A  +A     L  L   
Sbjct: 920 ADEAADRPDDDLWAGWPAETGHPRPAPEEGATAAPGGGPPPEEARLVASWDRDLDALAGE 979

Query: 84  LRSFHD 89
           LR    
Sbjct: 980 LRRARA 985


>gi|254474550|ref|ZP_05087936.1| oligo-1,6-glucosidase [Ruegeria sp. R11]
 gi|214028793|gb|EEB69628.1| oligo-1,6-glucosidase [Ruegeria sp. R11]
          Length = 552

 Score = 36.3 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 27/238 (11%), Positives = 61/238 (25%), Gaps = 40/238 (16%)

Query: 1   MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPIT 54
           + S+  L+      Q+ +L +  F+ + GV     +  N   ++++ +        Q   
Sbjct: 179 LVSQPDLNFHCPAVQDALLDVTRFWLERGVDGFRLDTINFYFHDAELRSNPALPPEQRNA 238

Query: 55  NIRHIHSP-LVQQADSIAQKACSLHEL---KSLLRSFHDCHLCSTSLSTICATQTEGQDL 110
            I    +P   Q+      +  +L  L   ++LL  +        + + +       + L
Sbjct: 239 TIAPSVNPYNHQEHLYSKNQPENLAFLGRFRALLDEY-------PAKAAVGEVGDAQRGL 291

Query: 111 MIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIE 170
            I+G              +G +G  +    + +                           
Sbjct: 292 EIMG-----------SYTAGNSGVHMCYAFELLAKDVLTASRLAEVFAEVDRVAANGWAC 340

Query: 171 MEICRPIIMRQIELISPKILLFIG-NKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227
                  ++R             G N      F           G           +P
Sbjct: 341 WAFSNHDVIRHSSR--------WGLNPAAQRLFTTMMMC---LRGTTCIYQGEELGLP 387


>gi|326797260|ref|YP_004315080.1| alpha amylase catalytic region [Marinomonas mediterranea MMB-1]
 gi|326548024|gb|ADZ93244.1| alpha amylase catalytic region [Marinomonas mediterranea MMB-1]
          Length = 539

 Score = 35.9 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 26/76 (34%), Gaps = 1/76 (1%)

Query: 9   QEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSP-LVQQA 67
           ++  L    F+ D GV     +  N   +    ++       +P T      +P   Q+ 
Sbjct: 181 RQANLDNMRFWLDLGVDGFRLDTVNFYFHSQGLEDNPPVPPGEPKTKGAPEDNPYSYQRH 240

Query: 68  DSIAQKACSLHELKSL 83
                +  +L  LK L
Sbjct: 241 VYDLSRPENLDFLKDL 256


>gi|328789780|ref|XP_392189.4| PREDICTED: hypothetical protein LOC408649 [Apis mellifera]
          Length = 1098

 Score = 35.9 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 65/206 (31%), Gaps = 18/206 (8%)

Query: 39  SQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLS 98
           + +                 I +P   +     ++A +  E +     F        S  
Sbjct: 233 NPQLTAHQPKKRGRKRKSEMILTPEEAELAEAKKRAKTYKE-RKKHDRFDGMPEEEVSKR 291

Query: 99  TICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM------------ 146
            +    T   D++IIG  P       G  ++G  GN   K L    +             
Sbjct: 292 VLPDHLTNNLDIIIIGINPGLFAAYKGHHYAGP-GNHFWKCLHLSGLTPEPLTADDDYKL 350

Query: 147 -RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNND 205
            R  I  + +      G+ +L+  E++    I++ ++    PKI +F G      F    
Sbjct: 351 LRFGIGFTNMVARATKGSADLTRKEIKEGSHILLEKLRKYKPKIAVFNGKLIYEVFSGKK 410

Query: 206 AQKTYQNLGKWSNLCTPHSIIPTLAT 231
                +   + + +   ++ +  + +
Sbjct: 411 DFGFGR---QPNLVEGTNTYMWVMPS 433


>gi|218752958|ref|ZP_03531754.1| hypothetical protein MtubG1_05720 [Mycobacterium tuberculosis GM
           1503]
          Length = 122

 Score = 35.9 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 8/59 (13%), Positives = 18/59 (30%)

Query: 42  KEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTI 100
             +            +   +    Q  ++A  A S+ EL +L+     C    +    +
Sbjct: 43  PVEPGSGWPGDPATPQTPVAADAAQVSALAGGAGSICELNALISVCRACPRLVSWREEV 101


>gi|190345614|gb|EDK37531.2| hypothetical protein PGUG_01629 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 967

 Score = 35.9 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 22/70 (31%), Gaps = 2/70 (2%)

Query: 27  VFDEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHEL--KSLL 84
           V   P  +   +  +K +   ++  P    R        Q +  A    ++  L  K  L
Sbjct: 95  VQSSPLPQQVEQPFQKPQPRPNSGSPAYTPREPPQQESIQEERSAAGPKTVANLPRKRAL 154

Query: 85  RSFHDCHLCS 94
            +   C +  
Sbjct: 155 TACDACRIKK 164


>gi|139948234|ref|NP_001077165.1| G/T mismatch-specific thymine DNA glycosylase [Bos taurus]
 gi|134024609|gb|AAI34452.1| TDG protein [Bos taurus]
 gi|296487665|gb|DAA29778.1| thymine-DNA glycosylase [Bos taurus]
          Length = 407

 Score = 35.9 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 4/124 (3%)

Query: 29  DEPNNEATYESQRKEKS---IDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLR 85
            EP  E   + ++++       + ++P        S    ++    +K     ++K  + 
Sbjct: 51  QEPTRETPPKGRKRKPRTTEPKTPVEPPEPAEAKKSGKSTKSKEKQEKITDTFKVKRKVD 110

Query: 86  SFHDCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEI 145
            F+          T+    T   D++IIG  P       G  + G  GN   K L    +
Sbjct: 111 RFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGP-GNHFWKCLFMSGL 169

Query: 146 MRTQ 149
              Q
Sbjct: 170 SEVQ 173


>gi|255264649|ref|ZP_05343991.1| oligo-1,6-glucosidase [Thalassiobium sp. R2A62]
 gi|255106984|gb|EET49658.1| oligo-1,6-glucosidase [Thalassiobium sp. R2A62]
          Length = 543

 Score = 35.9 bits (81), Expect = 6.5,   Method: Composition-based stats.
 Identities = 24/233 (10%), Positives = 57/233 (24%), Gaps = 32/233 (13%)

Query: 1   MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYESQRKEKSIDSAIQPIT 54
           + S+  L+      Q+ +L    F+ D GV     +  N    + + ++       Q  +
Sbjct: 170 LASQPDLNFHHMPVQDALLEATRFWLDRGVDGFRLDTINFYMADKELRDNPALPLDQRNS 229

Query: 55  NIRHIHSP-LVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113
            I    +P   Q+      +  +L  L+       +      + + +       + L I+
Sbjct: 230 TIAPSVNPYNHQEHLHSKNQPENLEFLRKFRALLDEYP----AATAVGEVGDAQRGLEIM 285

Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSNIEMEI 173
           G                  G+ L  M  + E++  +   +                E+  
Sbjct: 286 GE--------------YTRGDDLVHMCYAFELLEQKPLTAPRV-----AEVFARVDEVAA 326

Query: 174 CRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSII 226
                         + +                       G           +
Sbjct: 327 DGWACWAYSNHDVQRHVSRWNLTP--AALRLFTTMLMCLRGSVCLYQGEELGL 377


>gi|315042980|ref|XP_003170866.1| CMGC protein kinase [Arthroderma gypseum CBS 118893]
 gi|311344655|gb|EFR03858.1| CMGC protein kinase [Arthroderma gypseum CBS 118893]
          Length = 340

 Score = 35.9 bits (81), Expect = 6.6,   Method: Composition-based stats.
 Identities = 10/68 (14%), Positives = 18/68 (26%)

Query: 182 IELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYP 241
                P  +  +G    +              G   +      +I  L    P+ L + P
Sbjct: 211 RGWSYPIDIWSVGLTAWDMLEKKLLFTAKDKDGDVYDAAHFAQLIAALGPPPPEFLARNP 270

Query: 242 LIKKNTWH 249
             K + W 
Sbjct: 271 EKKADFWD 278


>gi|89068282|ref|ZP_01155692.1| probable alpha-glucosidase protein [Oceanicola granulosus HTCC2516]
 gi|89046199|gb|EAR52257.1| probable alpha-glucosidase protein [Oceanicola granulosus HTCC2516]
          Length = 529

 Score = 35.5 bits (80), Expect = 6.8,   Method: Composition-based stats.
 Identities = 24/237 (10%), Positives = 59/237 (24%), Gaps = 39/237 (16%)

Query: 1   MTSKRILS------QEQILTIALFYADSGVYWVFDEPNNEATYESQ-RKEKSIDSAIQPI 53
           +TS+  L+      Q+ +L +  F+ + G      +  N   ++   R    +   ++  
Sbjct: 156 LTSQPDLNLHSMEVQDALLDVVRFWLEKGCDGFRLDTINFYFHDKDLRDNPPLAPELRNA 215

Query: 54  TNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQDLMII 113
                ++    Q+      +  +L  L+ +        L     + +       + L I+
Sbjct: 216 NIAPSVNPYNHQEHLHSKNQPENLDFLRRVRA-----ELDRYGAAAVGEVGDAQRGLQIM 270

Query: 114 GYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISP---WHPPGNRNLSNIE 170
           G                  G+ L +M  + E + T    +              +     
Sbjct: 271 GQ--------------YTAGDELMQMCYAFEFLATDPLTAGRIAEVMTRVDEEASDGWAC 316

Query: 171 MEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIP 227
                  + R            +    +               G           +P
Sbjct: 317 WAFSNHDVTRHTTR------WNLTPAAQRMLCTLLMC----LRGSVCLYQGEELGLP 363


>gi|67922649|ref|ZP_00516154.1| Uracil-DNA glycosylase superfamily [Crocosphaera watsonii WH 8501]
 gi|67855497|gb|EAM50751.1| Uracil-DNA glycosylase superfamily [Crocosphaera watsonii WH 8501]
          Length = 225

 Score = 35.5 bits (80), Expect = 7.9,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 42/118 (35%), Gaps = 13/118 (11%)

Query: 97  LSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKML------------QSIE 144
              I        ++   G      +   G+P  G  G ML K              + ++
Sbjct: 35  TQPILYAGNLDSNICFFGRDLGKDEVAQGQPLIGSAGKMLRKGFYQGVYHQQPSSPEDLQ 94

Query: 145 IMRTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELIS-PKILLFIGNKTKNFF 201
            +  +  ++   P+ PPGN+  +    E  RP I + + +      ++ +G +   +F
Sbjct: 95  SICDRAILTNTVPYKPPGNKAYTIKVKERFRPFIAQLLAIYWGGNQIVTLGTEAFKWF 152


>gi|269125994|ref|YP_003299364.1| Uracil-DNA glycosylase superfamily [Thermomonospora curvata DSM
           43183]
 gi|268310952|gb|ACY97326.1| Uracil-DNA glycosylase superfamily [Thermomonospora curvata DSM
           43183]
          Length = 197

 Score = 35.5 bits (80), Expect = 8.1,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 35/150 (23%), Gaps = 22/150 (14%)

Query: 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM-------------R 147
            A       ++  G  P      SG  F+G  GN     L                    
Sbjct: 23  PADG-TRLRVLFCGINPGLYSGASGHHFAGP-GNRFWPALHRSGFTDRLLTPAEQTELLS 80

Query: 148 TQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQ 207
             + I+ +          L+  E+      +   +E   P+ L   G       F     
Sbjct: 81  HGLGITNLVARTTARADELTPQELREGGRRLTALVERYRPRYLAVAGVTAYRTAFG---- 136

Query: 208 KTYQNLGKWSNLCTPHSIIPTLATVHPQEL 237
              +   +      P          +P  L
Sbjct: 137 ---RPKARIGPQPEPLGPAKVWVLPNPSGL 163


>gi|304409691|ref|ZP_07391311.1| phage SPO1 DNA polymerase domain-containing protein [Shewanella
           baltica OS183]
 gi|307304047|ref|ZP_07583800.1| phage SPO1 DNA polymerase domain-containing protein [Shewanella
           baltica BA175]
 gi|304352209|gb|EFM16607.1| phage SPO1 DNA polymerase domain-containing protein [Shewanella
           baltica OS183]
 gi|306912945|gb|EFN43368.1| phage SPO1 DNA polymerase domain-containing protein [Shewanella
           baltica BA175]
          Length = 232

 Score = 35.5 bits (80), Expect = 8.2,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 41/137 (29%), Gaps = 19/137 (13%)

Query: 82  SLLRSFHDCHLCST----SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLD 137
           +LL   + C LC      +   I    +    ++I G  P    +  G PF   +G  L 
Sbjct: 3   ALLTKINACTLCQADLPLAPKPIL-QASSQARILIAGQAPGVKTHHKGIPFDDASGERLR 61

Query: 138 KML---QSIEIMRTQIHISMISPWHP---------PGNRNLSNIEMEICRPIIMRQIELI 185
             L   +          I  +    P          G++             ++    + 
Sbjct: 62  TWLNVTREQFYDPALFAIIPMGFCFPGSIEKNGKKQGDKPPRPECAATWHQALLA--LMP 119

Query: 186 SPKILLFIGNKTKNFFF 202
             ++++ +G    ++  
Sbjct: 120 QIELIVILGQYAIDYHL 136


>gi|167534057|ref|XP_001748707.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163772948|gb|EDQ86594.1| predicted protein [Monosiga brevicollis MX1]
          Length = 669

 Score = 35.5 bits (80), Expect = 8.4,   Method: Composition-based stats.
 Identities = 8/58 (13%), Positives = 13/58 (22%)

Query: 29  DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRS 86
           + P +E    +   E  +D    P              AD     A           +
Sbjct: 188 EAPVDELPAPADEPEAPVDELPAPADEPEAPADDPETPADEPEAPADEPEAPADEPEA 245


>gi|156552876|ref|XP_001600674.1| PREDICTED: similar to Thd1 [Nasonia vitripennis]
          Length = 953

 Score = 35.5 bits (80), Expect = 8.6,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 67/216 (31%), Gaps = 18/216 (8%)

Query: 29  DEPNNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFH 88
           D P+  +   +Q    +                    +     ++A +  E +     F 
Sbjct: 104 DNPDVMSCGGAQPGLGTPAPTPPNSQLCSAQQQQQQAELAEAKKRAKTYKE-RKKHDRFD 162

Query: 89  DCHLCSTSLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIM-- 146
                  S   +    T   D++IIG  P       G  ++G  GN   K L    +   
Sbjct: 163 GMPEEEVSKRVLPDHLTNDLDIIIIGINPGLFAAYKGHHYAGP-GNHFWKCLHLSGLTPE 221

Query: 147 -----------RTQIHISMISPWHPPGNRNLSNIEMEICRPIIMRQIELISPKILLFIGN 195
                      R  I  + +      G+ +L+  E++    I++ ++    PKI +F G 
Sbjct: 222 PLTADDDYKLLRLGIGFTNMVARATKGSADLTRKEIKEGSHILLEKLRKYKPKIAVFNGK 281

Query: 196 KTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLAT 231
                F         +   + + +   ++ +  + +
Sbjct: 282 LIYEVFSGKKEFGFGR---QPNLVDGTNTYMWVMPS 314


>gi|217973929|ref|YP_002358680.1| phage SPO1 DNA polymerase domain-containing protein [Shewanella
           baltica OS223]
 gi|217499064|gb|ACK47257.1| phage SPO1 DNA polymerase domain-containing protein [Shewanella
           baltica OS223]
          Length = 232

 Score = 35.1 bits (79), Expect = 8.9,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 40/136 (29%), Gaps = 19/136 (13%)

Query: 83  LLRSFHDCHLCST----SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDK 138
           LL   + C LC      +   I    +    ++I G  P    +  G PF   +G  L  
Sbjct: 4   LLTKINACTLCQADLPLAPKPIL-QASSQARILIAGQAPGVKTHHKGIPFDDASGERLRT 62

Query: 139 ML---QSIEIMRTQIHISMISPWHP---------PGNRNLSNIEMEICRPIIMRQIELIS 186
            L   +          I  +    P          G++             ++    +  
Sbjct: 63  WLNVTREQFYDPALFAIIPMGFCFPGSIEKNGKKQGDKPPRPECAATWHQALLA--LMPQ 120

Query: 187 PKILLFIGNKTKNFFF 202
            ++++ +G    ++  
Sbjct: 121 IELIVILGQYAIDYHL 136


>gi|325117189|emb|CBZ52741.1| conserved hypothetical protein [Neospora caninum Liverpool]
          Length = 1407

 Score = 35.1 bits (79), Expect = 9.9,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 20/81 (24%)

Query: 32  NNEATYESQRKEKSIDSAIQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCH 91
                      +K  +    P  +         +      + A     L +LL +   C 
Sbjct: 211 QRRLRKTQCEADKKGNFNPPPPRSSGPFPEGKNEAKRKDEEDAEERASLCALLAACRACP 270

Query: 92  LCSTSLSTICATQTEGQDLMI 112
           L  TS     +       + I
Sbjct: 271 LSWTSEQGEPSFGAAAAGVCI 291


>gi|163852106|ref|YP_001640149.1| uracil-DNA glycosylase superfamily protein [Methylobacterium
           extorquens PA1]
 gi|163663711|gb|ABY31078.1| Uracil-DNA glycosylase superfamily [Methylobacterium extorquens
           PA1]
          Length = 208

 Score = 35.1 bits (79), Expect = 9.9,   Method: Composition-based stats.
 Identities = 22/196 (11%), Positives = 43/196 (21%), Gaps = 28/196 (14%)

Query: 50  IQPITNIRHIHSPLVQQADSIAQKACSLHELKSLLRSFHDCHLCSTSLSTICATQTEGQD 109
                  + +  P +  A         + +L++  R        +               
Sbjct: 2   PASPDVPKSLRDPALLAARRAMVDVPHVRQLRAFARMIAA-ERGAAVPDPDPLDGGVAAR 60

Query: 110 LMIIGYTPSDSDNISGKPFSGKT-----GNMLDKMLQSIEIMRTQIHISMISPWHPP--- 161
           L+++  TP  S   +   F  +         L + L    I R    I    PW      
Sbjct: 61  LLLLLETPGPSIGRT--GFVSRDNPTGTAANLFRFLAEAGIARRDTLIWNAVPWVIHAPG 118

Query: 162 --GNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219
                                   L    +++  G   +       +        +    
Sbjct: 119 ALNRAPRRAEASAAAPYFAPLLALLPRLAVVVPAGRFARQA-----SAPLSALRPEL--- 170

Query: 220 CTPHSIIPTLATVHPQ 235
                  P +A  HP 
Sbjct: 171 -------PVVAIPHPS 179


>gi|153000103|ref|YP_001365784.1| phage SPO1 DNA polymerase domain-containing protein [Shewanella
           baltica OS185]
 gi|151364721|gb|ABS07721.1| phage SPO1 DNA polymerase domain protein [Shewanella baltica OS185]
          Length = 232

 Score = 35.1 bits (79), Expect = 9.9,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 40/136 (29%), Gaps = 19/136 (13%)

Query: 83  LLRSFHDCHLCST----SLSTICATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDK 138
           LL   + C LC      +   I    +    ++I G  P    +  G PF   +G  L  
Sbjct: 4   LLTKINACTLCQADLPLAPKPIL-QASSQARILIAGQAPGVKTHHKGIPFDDASGERLRT 62

Query: 139 ML---QSIEIMRTQIHISMISPWHP---------PGNRNLSNIEMEICRPIIMRQIELIS 186
            L   +          I  +    P          G++             ++    +  
Sbjct: 63  WLNVTREQFYDPALFAIIPMGFCFPGSIEKNGKKQGDKPPRPECAATWHQALLA--LMPQ 120

Query: 187 PKILLFIGNKTKNFFF 202
            ++++ +G    ++  
Sbjct: 121 IELIVILGQYAIDYHL 136


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.309    0.128    0.359 

Lambda     K      H
   0.267   0.0386    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,863,445,021
Number of Sequences: 14124377
Number of extensions: 60136686
Number of successful extensions: 295625
Number of sequences better than 10.0: 3372
Number of HSP's better than 10.0 without gapping: 2220
Number of HSP's successfully gapped in prelim test: 1152
Number of HSP's that attempted gapping in prelim test: 289567
Number of HSP's gapped (non-prelim): 4260
length of query: 261
length of database: 4,842,793,630
effective HSP length: 136
effective length of query: 125
effective length of database: 2,921,878,358
effective search space: 365234794750
effective search space used: 365234794750
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 79 (35.1 bits)