RPSBLAST alignment for GI: 254780743 and conserved domain: TIGR00758
>gnl|CDD|129841 TIGR00758, UDG_fam4, uracil-DNA glycosylase, family 4. This well-conserved family of proteins is about 200 residues in length and homologous to the N-terminus of the DNA polymerase of phage SPO1 of Bacillus subtilis. The member from Thermus thermophilus HB8 is known to act as uracil-DNA glycosylase, an enzyme of DNA base excision repair. Its appearance as a domain of phage DNA polymerases could be consistent with uracil-DNA glycosylase activity. Length = 173
Score = 102 bits (255), Expect = 1e-22
Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 9/156 (5%)
Query: 109 DLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRTQIHISMISPWHPPGNRNLSN 168
++M +G P ++ G+PF G+ G +LD+ML +I + R ++I+ + PP NR+ +
Sbjct: 23 NIMFVGEAPGREEDRKGRPFVGRAGKLLDEMLAAIGLSRENVYITNVVKCRPPNNRDPTP 82
Query: 169 IEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSI--- 225
E+E C P +++QIELI PK+++ +G + K +
Sbjct: 83 EEVEACAPYLVKQIELIRPKVIICLGRTAAQSILG-----KNDGITKIRGRVFEYRYIGT 137
Query: 226 -IPTLATVHPQELIQYPLIKKNTWHALITLKKALKN 260
I AT HP L++ P +++ LK+ L N
Sbjct: 138 KIKITATYHPAALLRNPQLRRELEEDFKKLKELLSN 173