RPSBLAST alignment for GI: 254780744 and conserved domain: TIGR01257

>gnl|CDD|130324 TIGR01257, rim_protein, retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease. Length = 2272

 Score = 98.2 bits (244), Expect = 2e-21
 Identities = 64/190 (33%), Positives = 103/190 (54%), Gaps = 3/190 (1%)

Query: 52   EIVGLLGPNGAGKTTFFYMMTGLICADSGSIKIDGNDITKMPMYRRARLGISYLPQEASI 111
            +I   LG NGAGKTT   ++TGL+   SG++ + G DI       R  LG+   PQ   +
Sbjct: 957  QITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIETNLDAVRQSLGMC--PQHNIL 1014

Query: 112  FRGLTVEENILAVLEVYEKDKKKRHEKLDSLLKEFNITKWRHVLAPLLSGGQRRRLEIAR 171
            F  LTV E+IL   ++  +  ++   +++++L++  +   R+  A  LSGG +R+L +A 
Sbjct: 1015 FHHLTVAEHILFYAQLKGRSWEEAQLEMEAMLEDTGLHHKRNEEAQDLSGGMQRKLSVAI 1074

Query: 172  SLVSFPSYILLDEPFAGVDPVAISDIHVLIRDLASRGIGILITDHNVHEILTLIDRAYII 231
            + V     ++LDEP +GVDP +   I  L+    S G  I+++ H++ E   L DR  II
Sbjct: 1075 AFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYRS-GRTIIMSTHHMDEADLLGDRIAII 1133

Query: 232  HAGGVLAHGT 241
              G +   GT
Sbjct: 1134 SQGRLYCSGT 1143