RPSBLAST alignment for GI: 254780744 and conserved domain: TIGR01978
>gnl|CDD|162636 TIGR01978, sufC, FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA. Length = 243
Score = 95.8 bits (239), Expect = 9e-21
Identities = 62/237 (26%), Positives = 99/237 (41%), Gaps = 28/237 (11%)
Query: 26 LSACSLTKKYNSVYVVKGVDLYVKPGEIVGLLGPNGAGKTTFFYMMTG----LICADSGS 81
L L ++KGV+L VK GEI ++GPNG+GK+T + G + SG+
Sbjct: 1 LKIKDLHVSVEDKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVT--SGT 58
Query: 82 IKIDGNDITKMPMYRRARLGISYLPQEASIFRGLTVEENILAVLEVYEKDKKKRHEKLDS 141
I G D+ ++ RAR G+ Q G++ E + + L + + L
Sbjct: 59 ILFKGQDLLELEPDERARAGLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLD 118
Query: 142 LLKEFNITKWRHVLAPL--------------LSGGQRRRLEIARSLVSFPSYILLDEPFA 187
LK + LA L SGG+++R EI + + P +LDE +
Sbjct: 119 FLKLL-----KAKLALLGMDEEFLNRSVNEGFSGGEKKRNEILQMALLEPKLAILDEIDS 173
Query: 188 GVDPVAISDIHVLIRDLASRGIGILITDHNVHEILTLI--DRAYIIHAGGVLAHGTV 242
G+D A+ + I L LI H +L I D +++ G ++ G V
Sbjct: 174 GLDIDALKIVAEGINRLREPDRSFLIITHY-QRLLNYIKPDYVHVLLDGRIVKSGDV 229