RPSBLAST alignment for GI: 254780744 and conserved domain: cd03220
>gnl|CDD|72979 cd03220, ABC_KpsT_Wzt, ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.. Length = 224
Score = 92.9 bits (231), Expect = 9e-20
Identities = 58/228 (25%), Positives = 92/228 (40%), Gaps = 25/228 (10%)
Query: 19 RASKDSLLSACSLTKKYNSVYVVKGVDLYVKPGEIVGLLGPNGAGKTTFFYMMTGLICAD 78
+S L + + +K V V GE +GL+G NGAGK+T ++ G+ D
Sbjct: 16 GSSSLKKLGILGRKGEVGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPPD 75
Query: 79 SGSIKIDGNDITKMPMYRRARLGISYLPQEASIFRG-LTVEENILAVLEVYEKDKKKRHE 137
SG++ + G +S L F LT ENI + +K+ E
Sbjct: 76 SGTVTVRGR--------------VSSLLGLGGGFNPELTGRENIYLNGRLLGLSRKEIDE 121
Query: 138 KLD-----SLLKEFNITKWRHVLAPLLSGGQRRRLEIARSLVSFPSYILLDEPFAGVDPV 192
K+D S L +F + S G + RL A + P +L+DE A D
Sbjct: 122 KIDEIIEFSELGDFIDLPVKT-----YSSGMKARLAFAIATALEPDILLIDEVLAVGDAA 176
Query: 193 AISDIHVLIRDLASRGIGILITDHNVHEILTLIDRAYIIHAGGVLAHG 240
+R+L +G +++ H+ I L DRA ++ G + G
Sbjct: 177 FQEKCQRRLRELLKQGKTVILVSHDPSSIKRLCDRALVLEKGKIRFDG 224