RPSBLAST alignment for GI: 254780744 and conserved domain: cd03228
>gnl|CDD|72987 cd03228, ABCC_MRP_Like, The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 171
Score = 119 bits (301), Expect = 6e-28
Identities = 61/199 (30%), Positives = 93/199 (46%), Gaps = 41/199 (20%)
Query: 36 NSVYVVKGVDLYVKPGEIVGLLGPNGAGKTTFFYMMTGLICADSGSIKIDGNDITKMPMY 95
V+K V L +KPGE V ++GP+G+GK+T ++ L SG I IDG D+ + +
Sbjct: 13 RPKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEILIDGVDLRDLDLE 72
Query: 96 RRARLGISYLPQEASIFRGLTVEENILAVLEVYEKDKKKRHEKLDSLLKEFNITKWRHVL 155
+ I+Y+PQ+ +F G T+ ENI
Sbjct: 73 SLRKN-IAYVPQDPFLFSG-TIRENI---------------------------------- 96
Query: 156 APLLSGGQRRRLEIARSLVSFPSYILLDEPFAGVDPVAISDIHVLIRDLASRGIGILITD 215
LSGGQR+R+ IAR+L+ P ++LDE + +DP + I +R LA I+I
Sbjct: 97 ---LSGGQRQRIAIARALLRDPPILILDEATSALDPETEALILEALRALAKGKTVIVIA- 152
Query: 216 HNVHEILTLIDRAYIIHAG 234
H + I DR ++ G
Sbjct: 153 HRLSTIR-DADRIIVLDDG 170