RPSBLAST alignment for GI: 254780744 and conserved domain: cd03294

>gnl|CDD|73053 cd03294, ABC_Pro_Gly_Bertaine, This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 269
 Score =  121 bits (306), Expect = 1e-28
 Identities = 73/242 (30%), Positives = 117/242 (48%), Gaps = 14/242 (5%)

Query: 13  PEFQENRASKDSLLSACSLTKKYNSVYVVKGVDLYVKPGEIVGLLGPNGAGKTTFFYMMT 72
            +      SK+ +L      KK      V  V L V+ GEI  ++G +G+GK+T    + 
Sbjct: 18  FKLLAKGKSKEEIL------KKTGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCIN 71

Query: 73  GLICADSGSIKIDGNDITKMP-----MYRRARLGISYLPQEASIFRGLTVEENILAVLEV 127
            LI   SG + IDG DI  M        RR ++ + +  Q  ++    TV EN+   LEV
Sbjct: 72  RLIEPTSGKVLIDGQDIAAMSRKELRELRRKKISMVF--QSFALLPHRTVLENVAFGLEV 129

Query: 128 YEKDKKKRHEKLDSLLKEFNITKWRHVLAPLLSGGQRRRLEIARSLVSFPSYILLDEPFA 187
               + +R E+    L+   +  W H     LSGG ++R+ +AR+L   P  +L+DE F+
Sbjct: 130 QGVPRAEREERAAEALELVGLEGWEHKYPDELSGGMQQRVGLARALAVDPDILLMDEAFS 189

Query: 188 GVDPVAISDIHVLIRDL-ASRGIGILITDHNVHEILTLIDRAYIIHAGGVLAHGTVQEII 246
            +DP+   ++   +  L A     I+   H++ E L L DR  I+  G ++  GT +EI+
Sbjct: 190 ALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEIL 249

Query: 247 DN 248
            N
Sbjct: 250 TN 251