HHsearch alignment for GI: 254780745 and conserved domain: COG1934
>COG1934 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=98.44 E-value=1.1e-05 Score=49.19 Aligned_cols=87 Identities=15% Similarity=0.080 Sum_probs=68.1
Q ss_pred CEEEEEEEEEEEC--CCC--EEEEEEE----EEEEEC--CEEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCC
Q ss_conf 4799911699992--388--7999800----899978--75999968999961766544420012220122202455653
Q gi|254780745|r 44 KIHIKADMLEVKD--AVQ--KAFFKGN----VFMTQE--DFSLQADKMTIDYNNTNRDVSNKINRMDVERNIFIQSGEIN 113 (181)
Q Consensus 44 Pi~I~AD~~~~d~--~~~--~~~~~GN----V~i~qg--~~~i~aD~l~i~~~~~~~~~~~~i~~~~a~gnv~~~~~~~~ 113 (181)
T Consensus 61 ~~~l~Adkv~v~~~~~~~~~~i~a~gn~~~~~q~~~~~k~~~g~ad~~~Y~~~~~---------~~vLtGna~v~q~gn~ 131 (173)
T COG1934 61 TITLRADKVTVTRDKEGGKEVIEANGNPATFSQKVDNGKTQKGTADQAIYDLKND---------TIVLTGNAYVLQLGNV 131 (173)
T ss_pred CCEEEEEEEEEECCCCCCCEEEEEECCEEEEEEEECCCCCEEEEEEEEEEEECCC---------EEEEECCEEEEECCCE
T ss_conf 6179713699980578985489995466678876507850388851699982078---------9999477999857988
Q ss_pred EEEEEEEEECCCCEEEEEECCCCEEE
Q ss_conf 32112799416658999947863499
Q gi|254780745|r 114 VIASNGYVDFQKRILVLNGDRADKVI 139 (181)
Q Consensus 114 ~~a~~~~y~~~~~~~~l~Gna~~~v~ 139 (181)
T Consensus 132 i~G~kIty~~~~~~~~a~~~~~~RV~ 157 (173)
T COG1934 132 IRGDKITYLTKTGRAVAESSKGGRVR 157 (173)
T ss_pred EEEEEEEEECCCCEEEECCCCCCCEE
T ss_conf 87639999943457996288998479