HHsearch alignment for GI: 254780745 and conserved domain: COG3117

>COG3117 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=97.31  E-value=0.0034  Score=35.74  Aligned_cols=122  Identities=14%  Similarity=0.128  Sum_probs=75.0

Q ss_pred             CCCEEEEEEEEEEECCCCEEEEEEEEEEEEC----CEEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCC-----C-CC
Q ss_conf             7847999116999923887999800899978----759999689999617665444200122201222024-----5-56
Q gi|254780745|r   42 NEKIHIKADMLEVKDAVQKAFFKGNVFMTQE----DFSLQADKMTIDYNNTNRDVSNKINRMDVERNIFIQ-----S-GE  111 (181)
Q Consensus        42 ~~Pi~I~AD~~~~d~~~~~~~~~GNV~i~qg----~~~i~aD~l~i~~~~~~~~~~~~i~~~~a~gnv~~~-----~-~~  111 (181)
T Consensus        57 ~~~y~l~a~~~eh~~~~~~t~ft~P~l~lf~e~~q~w~v~Ad~a~l~~d~~----------l~l~~~vvv~~~t~d~~q~  126 (188)
T COG3117          57 KLKYRLTAQHVEHYSDSSDTHFTAPVLTLFRENRQTWTVQADRAKLTKDGK----------LYLLGDVVVVALTPDSGQL  126 (188)
T ss_pred             CEEEEEEHHHHHHCCCCCCEEEECCEEEEECCCCCCEEEEHHHHEECCCCE----------EEEEECEEEEEECCCCCCC
T ss_conf             056776323454154566557715359988388762799810202157855----------9987120677514776676


Q ss_pred             CCEEEEEEEEECCCCEEEEEECCCCEEEEEECCCEEEEEEEEEEECCCEEEEEECCCCEEEEEEECCCCC
Q ss_conf             5332112799416658999947863499971797699229999921658999928998099998118769
Q gi|254780745|r  112 INVIASNGYVDFQKRILVLNGDRADKVILKEKLNTFLGCKLIVNIDTSFASLQGCESDQVQSIIRYDGRP  181 (181)
Q Consensus       112 ~~~~a~~~~y~~~~~~~~l~Gna~~~v~l~q~~~~i~gdki~yn~~tg~~~~~g~~~~rV~~i~~~~~r~  181 (181)
T Consensus       127 ~~l~T~~~~V~l~tqd~~te~----~V~l~~~~~~~tg~gm~~n~k~~~a~L~~----kV~t~yE~~~~~  188 (188)
T COG3117         127 QRLTTESAQVNLKTQDAQTED----PVTLYGGQFVSTANGMTGNLKTQQANLLS----KVRTRYEVLKAR  188 (188)
T ss_pred             CEEEEEEEEECCCCCCEECCC----CEEEECCCCCCCCCCEEEEHHHHHHHHHH----CCCCEEEECCCC
T ss_conf             458710237613310000377----56674354402320147754655666421----245178724689