HHsearch alignment for GI: 254780745 and conserved domain: COG3117
>COG3117 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=97.31 E-value=0.0034 Score=35.74 Aligned_cols=122 Identities=14% Similarity=0.128 Sum_probs=75.0
Q ss_pred CCCEEEEEEEEEEECCCCEEEEEEEEEEEEC----CEEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCC-----C-CC
Q ss_conf 7847999116999923887999800899978----759999689999617665444200122201222024-----5-56
Q gi|254780745|r 42 NEKIHIKADMLEVKDAVQKAFFKGNVFMTQE----DFSLQADKMTIDYNNTNRDVSNKINRMDVERNIFIQ-----S-GE 111 (181)
Q Consensus 42 ~~Pi~I~AD~~~~d~~~~~~~~~GNV~i~qg----~~~i~aD~l~i~~~~~~~~~~~~i~~~~a~gnv~~~-----~-~~ 111 (181)
T Consensus 57 ~~~y~l~a~~~eh~~~~~~t~ft~P~l~lf~e~~q~w~v~Ad~a~l~~d~~----------l~l~~~vvv~~~t~d~~q~ 126 (188)
T COG3117 57 KLKYRLTAQHVEHYSDSSDTHFTAPVLTLFRENRQTWTVQADRAKLTKDGK----------LYLLGDVVVVALTPDSGQL 126 (188)
T ss_pred CEEEEEEHHHHHHCCCCCCEEEECCEEEEECCCCCCEEEEHHHHEECCCCE----------EEEEECEEEEEECCCCCCC
T ss_conf 056776323454154566557715359988388762799810202157855----------9987120677514776676
Q ss_pred CCEEEEEEEEECCCCEEEEEECCCCEEEEEECCCEEEEEEEEEEECCCEEEEEECCCCEEEEEEECCCCC
Q ss_conf 5332112799416658999947863499971797699229999921658999928998099998118769
Q gi|254780745|r 112 INVIASNGYVDFQKRILVLNGDRADKVILKEKLNTFLGCKLIVNIDTSFASLQGCESDQVQSIIRYDGRP 181 (181)
Q Consensus 112 ~~~~a~~~~y~~~~~~~~l~Gna~~~v~l~q~~~~i~gdki~yn~~tg~~~~~g~~~~rV~~i~~~~~r~ 181 (181)
T Consensus 127 ~~l~T~~~~V~l~tqd~~te~----~V~l~~~~~~~tg~gm~~n~k~~~a~L~~----kV~t~yE~~~~~ 188 (188)
T COG3117 127 QRLTTESAQVNLKTQDAQTED----PVTLYGGQFVSTANGMTGNLKTQQANLLS----KVRTRYEVLKAR 188 (188)
T ss_pred CEEEEEEEEECCCCCCEECCC----CEEEECCCCCCCCCCEEEEHHHHHHHHHH----CCCCEEEECCCC
T ss_conf 458710237613310000377----56674354402320147754655666421----245178724689