HHsearch alignment for GI: 254780745 and conserved domain: TIGR03002
>TIGR03002 outer_YhbN cell envelope biogenesis protein YhbN; InterPro: IPR014340 Members of this entry include YhbN, which is an essential protein in Escherichia coli. It is implicated in cell envelope integrity, and has numerous homologues in other Proteobacteria in a conserved location near lipopolysaccharide inner core biosynthesis genes. This entry is distantly related to the organic solvent tolerance protein (OstA)..
Probab=100.00 E-value=2.4e-34 Score=204.60 Aligned_cols=135 Identities=24% Similarity=0.300 Sum_probs=121.6
Q ss_pred CCCCCCCCCEEEEEEEEEEECCCCEEEEEEEEEEEECCEEEEEEEEEEEECCCCCCCCCCEEEEEECCC-C-CCC----C
Q ss_conf 244577784799911699992388799980089997875999968999961766544420012220122-2-024----5
Q gi|254780745|r 36 RFKVLGNEKIHIKADMLEVKDAVQKAFFKGNVFMTQEDFSLQADKMTIDYNNTNRDVSNKINRMDVERN-I-FIQ----S 109 (181)
Q Consensus 36 ~~~~d~~~Pi~I~AD~~~~d~~~~~~~~~GNV~i~qg~~~i~aD~l~i~~~~~~~~~~~~i~~~~a~gn-v-~~~----~ 109 (181)
T Consensus 1 a~~~D~~qPi~I~Ad~~~~D~~~~~~~f~GnV~itQG~~~I~ADkv~v~~~~~----~~~~~~~~A~G~~PA~F~q~~d~ 76 (150)
T TIGR03002 1 ALSSDREQPIEIEADSQTLDDKKNVVTFTGNVVITQGTLKIRADKVVVTRPND----GGGIEKATATGNKPATFRQKLDD 76 (150)
T ss_pred CCCCCCCCCEEEEEEEEEEECCCCEEEEECCEEEEECCEEEECCEEEEEECCC----CCCEEEEEEECCCCEEEEEEECC
T ss_conf 97787568689994006654028838886565878297598522889882688----78608999980781898899559
Q ss_pred C-C-CCEEEEEEEEECCCCEEEEEECCCCEEEEEECC-CEEEEEEEEEEECCCEEEEEECCC------CEEEEEEECC
Q ss_conf 5-6-533211279941665899994786349997179-769922999992165899992899------8099998118
Q gi|254780745|r 110 G-E-INVIASNGYVDFQKRILVLNGDRADKVILKEKL-NTFLGCKLIVNIDTSFASLQGCES------DQVQSIIRYD 178 (181)
Q Consensus 110 ~-~-~~~~a~~~~y~~~~~~~~l~Gna~~~v~l~q~~-~~i~gdki~yn~~tg~~~~~g~~~------~rV~~i~~~~ 178 (181)
T Consensus 77 g~~~~~g~A~~i~Y~~~~~~~~Ltg~A~----v~Q~~k~~~~G~~I~Y~~~~q~~~a~~~~~~~~~~~~RV~~ii~P~ 150 (150)
T TIGR03002 77 GKEYIEGQANRIEYDPAKDTVVLTGNAR----VKQGGKNEVSGDVITYDTKKQKVTAKGGGGSAKGASGRVTTIIQPK 150 (150)
T ss_pred CCEEEEEECCEEEEECCCCEEEEECCEE----EEECCCCEEECCEEEEECEEEEEEEEECCCCCCCCCCCEEEEEECC
T ss_conf 9827999711899932577999912349----9788977787668898440129989807888998697179998409