HHsearch alignment for GI: 254780746 and conserved domain: COG3117
>COG3117 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=99.64 E-value=1.2e-14 Score=101.55 Aligned_cols=176 Identities=16% Similarity=0.196 Sum_probs=135.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECEEEEEECCCCC-EEEEEEEEEEECCCCCCCEEEEE
Q ss_conf 99999999999999987642003444445443134554305871108998849988-89999601133588987449999
Q gi|254780746|r 26 FLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDYSKDRV-KYSLVAERAKTSFNSGKGIIFLQ 104 (215)
Q Consensus 26 ~lKi~Lpl~al~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~P~~~G~~~~g~-~~~itA~~A~~~~~~~~~~i~L~ 104 (215)
T Consensus 6 w~~~ILll~a~~~~~w~~~~~~~---~~~~v~~~~d~p-~Y~~e~~~~~~~de~G~~~y~l~a~~~-eh~~-~~~~t~ft 79 (188)
T COG3117 6 WVYLILLLAALALSGWLLGLEQD---EIEQVRPNPDEP-AYTMEGLDTTVYDEQGKLKYRLTAQHV-EHYS-DSSDTHFT 79 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCC-CEEECCCCEEEECCCCCEEEEEEHHHH-HHCC-CCCCEEEE
T ss_conf 99999999999999987620135---524410499986-402057423677777605677632345-4154-56655771
Q ss_pred EEEEEEEECCCCEEEEEEEEEEEEEECCCCEEEEECCEEEEEC-CC---CEEEEEEEEEEEEEEEEEECCCEEEEECCCE
Q ss_conf 5689998168845679999345899735646999777799951-57---3999821279972038995385899907718
Q gi|254780746|r 105 DFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMKVK-DN---LRLDFETAVLDVKNITINSSDPVIITHSDFV 180 (215)
Q Consensus 105 ~v~a~i~~~~g~~~~i~i~A~~G~y~~~~~~l~L~g~V~i~~~-~G---~~l~t~~~~~d~~~~~i~s~~~V~~~~~~g~ 180 (215)
T Consensus 80 ~P~l~lf~e~--~q~w~v~Ad~a~l~~d~~l~l~~~vvv~~~t~d~~q~~~l~T~~~~V~l~tqd~~te~~V~l~~~~~~ 157 (188)
T COG3117 80 APVLTLFREN--RQTWTVQADRAKLTKDGKLYLLGDVVVVALTPDSGQLQRLTTESAQVNLKTQDAQTEDPVTLYGGQFV 157 (188)
T ss_pred CCEEEEECCC--CCCEEEEHHHHEECCCCEEEEEECEEEEEECCCCCCCCEEEEEEEEECCCCCCEECCCCEEEECCCCC
T ss_conf 5359988388--76279981020215785599871206775147766764587102376133100003775667435440
Q ss_pred EEEEEEEEEECCCEEEEECCEEEEECHHH
Q ss_conf 99707999927868999889699983113
Q gi|254780746|r 181 LSANFARIENSSRSAVFAGQVSVVVNPGV 209 (215)
Q Consensus 181 i~A~~m~i~~~~~~i~F~g~V~l~i~p~~ 209 (215)
T Consensus 158 ~tg~gm~~n~k~~~a~L~~kV~t~yE~~~ 186 (188)
T COG3117 158 STANGMTGNLKTQQANLLSKVRTRYEVLK 186 (188)
T ss_pred CCCCCEEEEHHHHHHHHHHCCCCEEEECC
T ss_conf 23201477546556664212451787246