HHsearch alignment for GI: 254780746 and conserved domain: pfam06835
>pfam06835 DUF1239 Protein of unknown function (DUF1239). This family consists of several hypothetical bacterial proteins of around 190 residues in length. The function of this family is unknown.
Probab=98.67 E-value=3.2e-06 Score=53.94 Aligned_cols=106 Identities=13% Similarity=0.086 Sum_probs=87.2
Q ss_pred EEEECEEEEEECCCCCEEEEEEEEEEECCCCCCCEEEEEE-EEEEEEECCCCEEEEEEEEEEEEEECCCCEEEEECCEEE
Q ss_conf 5871108998849988899996011335889874499995-689998168845679999345899735646999777799
Q gi|254780746|r 66 MIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQD-FELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKM 144 (215)
Q Consensus 66 ~~m~~P~~~G~~~~g~~~~itA~~A~~~~~~~~~~i~L~~-v~a~i~~~~g~~~~i~i~A~~G~y~~~~~~l~L~g~V~i 144 (215)
T Consensus 69 ~~l~~P~~~~~~~~~~~w~i~A~~g~~~~--~~~~i~L~g~V~i~~--~~~~~~~~~l~T~~l~~~~~~~~~~td~~V~i 144 (176)
T pfam06835 69 TEFTNPVLIIYQDGKPPWTITADRAKLNK--DGQTLYLYGNVVIQS--LEDKSRLTTITTENLTVNLDTQDASTDQPVTI 144 (176)
T ss_pred EEEEEEEEEEECCCCCEEEEEECEEEEEC--CCCEEEEECCEEEEE--CCCCCCCEEEEEHEEEEECCCCEEEECCCEEE
T ss_conf 89996399997799836999979499937--996999989999997--68998756999220999947779994874999
Q ss_pred EECCCCEEEEEEEEEEEEEEEEEECCCEEEEE
Q ss_conf 95157399982127997203899538589990
Q gi|254780746|r 145 KVKDNLRLDFETAVLDVKNITINSSDPVIITH 176 (215)
Q Consensus 145 ~~~~G~~l~t~~~~~d~~~~~i~s~~~V~~~~ 176 (215)
T Consensus 145 ~~~~-~~~~g~gm~~~l~~~~~~l~~~Vr~~y 175 (176)
T pfam06835 145 TGPN-FVSTGTGMKANLKTGTAELLSNVRGRY 175 (176)
T ss_pred EECC-CEEEEEEEEEECCCCEEEEECCCEEEE
T ss_conf 9099-799988899997589999943616995