HHsearch results for GI: 254780746 and protein with PDBid: 3my2_A
>3my2_A Lipopolysaccharide export system protein LPTC; lipopolysaccharide export pathway, structural genomics scottish structural proteomics facility; 2.20A {Escherichia coli}
Probab=99.81 E-value=7.7e-19 Score=124.08 Aligned_cols=144 Identities=15% Similarity=0.117 Sum_probs=124.9
Q ss_pred EEEEECEEEEEECCCCC-EEEEEEEEEEECCCCCCCEEEEEEEEEEEEECCCCEEEEEEEEEEEEEECCCCEEEEECCEE
Q ss_conf 05871108998849988-89999601133588987449999568999816884567999934589973564699977779
Q gi|254780746|r 65 PMIMKKFILSDYSKDRV-KYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFK 143 (215)
Q Consensus 65 ~~~m~~P~~~G~~~~g~-~~~itA~~A~~~~~~~~~~i~L~~v~a~i~~~~g~~~~i~i~A~~G~y~~~~~~l~L~g~V~ 143 (215)
...+++....-++.+|. .|.|+|+++.... +.+.+.|+.|...++..++. ..+.|+|++|.++.. +.+.|.|||+
T Consensus 25 dy~~~~~~~~~~d~~G~l~~~l~A~~~~~~~--~~~~~~l~~P~~~~~~~~~~-~~w~itA~~g~~~~~-~~l~L~gnV~ 100 (175)
T 3my2_A 25 TYKSEHTDTLVYNPEGALSYRLIAQHVEYYS--DQAVSWFTQPVLTTFDKDKI-PTWSVKADKAKLTND-RMLYLYGHVE 100 (175)
T ss_dssp ------------------CEEEECSSEEEET--TTTEEEEESCEEEEECTTCC-EEEEEECSEEEECTT-SEEEEEEEEE
T ss_pred CEEEEEEEEEEECCCCCEEEEEECCHHEECC--CCCCEEEECCEEEEECCCCC-CEEEEEECEEEECCC-CEEEEECEEE
T ss_conf 4999951899999999899999916314214--88964882559999748998-229999385898799-6899964099
Q ss_pred EEECCC----CEEEEEEEEEEEEEEEEEECCCEEEEECCCEEEEEEEEEEECCCEEEEECCEEEEECHHHHCC
Q ss_conf 995157----399982127997203899538589990771899707999927868999889699983113201
Q gi|254780746|r 144 MKVKDN----LRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAVFAGQVSVVVNPGVLQK 212 (215)
Q Consensus 144 i~~~~G----~~l~t~~~~~d~~~~~i~s~~~V~~~~~~g~i~A~~m~i~~~~~~i~F~g~V~l~i~p~~~~~ 212 (215)
+...++ +.|.|+.+.|+.+++.+.|+.||.++++++.++|.||+++.+.+.+.|.|+||..|.|..-+.
T Consensus 101 i~~~~~~~~~~~l~T~~L~~~~~~~~~~td~~V~i~~~~~~~~g~gm~~~l~~~~~~l~~~Vk~~ye~~~~~~ 173 (175)
T 3my2_A 101 VNALVPDSQLRRITTDNAQINLVTQDVTSEDLVTLYGTTFNSSGLKMRGNLRSKNAELIEKVRTSYEIQNKQT 173 (175)
T ss_dssp EEECSSSCSEEEEEEEEEEEETTTCEEEEEEEEEEEESSCEEEEEEEEEETTTTEEEEEEEEEETTCC-----
T ss_pred EEECCCCCCCEEEEEEEEEEEECCCEEEECCCEEEECCCCEEEEEEEEEECCCCEEEEECCEEEEEECCCCCC
T ss_conf 9963788874699981599991567999488499992996999778999963899999406289992886678