HHsearch results for GI: 254780746 and protein with PDBid: 3my2_A
>3my2_A Lipopolysaccharide export system protein LPTC; lipopolysaccharide export pathway, structural genomics scottish structural proteomics facility; 2.20A {Escherichia coli}
Probab=98.47 E-value=1.6e-05 Score=48.83 Aligned_cols=108 Identities=12% Similarity=0.159 Sum_probs=85.8
Q ss_pred CEEEEECEEEEEECCCCC-EEEEEEEEEEECCCCCCCEEEEEEEEEEEEECCCCEEEEEEEEEEEEEECCCCEEEEECCE
Q ss_conf 305871108998849988-8999960113358898744999956899981688456799993458997356469997777
Q gi|254780746|r 64 EPMIMKKFILSDYSKDRV-KYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPF 142 (215)
Q Consensus 64 ~~~~m~~P~~~G~~~~g~-~~~itA~~A~~~~~~~~~~i~L~~v~a~i~~~~g~~~~i~i~A~~G~y~~~~~~l~L~g~V 142 (215)
....+++|.+.-+..+|. .|.|+|++|.-+ .+ +.+.|.+ ...+....+......|.++...|+..++.+.-.+.|
T Consensus 58 ~~~~l~~P~~~~~~~~~~~~w~itA~~g~~~--~~-~~l~L~g-nV~i~~~~~~~~~~~l~T~~L~~~~~~~~~~td~~V 133 (175)
T 3my2_A 58 AVSWFTQPVLTTFDKDKIPTWSVKADKAKLT--ND-RMLYLYG-HVEVNALVPDSQLRRITTDNAQINLVTQDVTSEDLV 133 (175)
T ss_dssp TEEEEESCEEEEECTTCCEEEEEECSEEEEC--TT-SEEEEEE-EEEEEECSSSCSEEEEEEEEEEEETTTCEEEEEEEE
T ss_pred CCEEEECCEEEEECCCCCCEEEEEECEEEEC--CC-CEEEEEC-EEEEEECCCCCCCEEEEEEEEEEEECCCEEEECCCE
T ss_conf 9648825599997489982299993858987--99-6899964-099996378887469998159999156799948849
Q ss_pred EEEECCCCEEEEEEEEEEEEEEEEEECCCEEEEE
Q ss_conf 9995157399982127997203899538589990
Q gi|254780746|r 143 KMKVKDNLRLDFETAVLDVKNITINSSDPVIITH 176 (215)
Q Consensus 143 ~i~~~~G~~l~t~~~~~d~~~~~i~s~~~V~~~~ 176 (215)
+|...+ ..+.+..+.+|++.+.+...+.|.+.-
T Consensus 134 ~i~~~~-~~~~g~gm~~~l~~~~~~l~~~Vk~~y 166 (175)
T 3my2_A 134 TLYGTT-FNSSGLKMRGNLRSKNAELIEKVRTSY 166 (175)
T ss_dssp EEEESS-CEEEEEEEEEETTTTEEEEEEEEEETT
T ss_pred EEECCC-CEEEEEEEEEECCCCEEEEECCEEEEE
T ss_conf 999299-699977899996389999940628999