HHsearch results for GI: 254780746 and protein with PDBid: 3my2_A

>3my2_A Lipopolysaccharide export system protein LPTC; lipopolysaccharide export pathway, structural genomics scottish structural proteomics facility; 2.20A {Escherichia coli}
Probab=98.47  E-value=1.6e-05  Score=48.83  Aligned_cols=108  Identities=12%  Similarity=0.159  Sum_probs=85.8

Q ss_pred             CEEEEECEEEEEECCCCC-EEEEEEEEEEECCCCCCCEEEEEEEEEEEEECCCCEEEEEEEEEEEEEECCCCEEEEECCE
Q ss_conf             305871108998849988-8999960113358898744999956899981688456799993458997356469997777
Q gi|254780746|r   64 EPMIMKKFILSDYSKDRV-KYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPF  142 (215)
Q Consensus        64 ~~~~m~~P~~~G~~~~g~-~~~itA~~A~~~~~~~~~~i~L~~v~a~i~~~~g~~~~i~i~A~~G~y~~~~~~l~L~g~V  142 (215)
                      ....+++|.+.-+..+|. .|.|+|++|.-+  .+ +.+.|.+ ...+....+......|.++...|+..++.+.-.+.|
T Consensus        58 ~~~~l~~P~~~~~~~~~~~~w~itA~~g~~~--~~-~~l~L~g-nV~i~~~~~~~~~~~l~T~~L~~~~~~~~~~td~~V  133 (175)
T 3my2_A           58 AVSWFTQPVLTTFDKDKIPTWSVKADKAKLT--ND-RMLYLYG-HVEVNALVPDSQLRRITTDNAQINLVTQDVTSEDLV  133 (175)
T ss_dssp             TEEEEESCEEEEECTTCCEEEEEECSEEEEC--TT-SEEEEEE-EEEEEECSSSCSEEEEEEEEEEEETTTCEEEEEEEE
T ss_pred             CCEEEECCEEEEECCCCCCEEEEEECEEEEC--CC-CEEEEEC-EEEEEECCCCCCCEEEEEEEEEEEECCCEEEECCCE
T ss_conf             9648825599997489982299993858987--99-6899964-099996378887469998159999156799948849


Q ss_pred             EEEECCCCEEEEEEEEEEEEEEEEEECCCEEEEE
Q ss_conf             9995157399982127997203899538589990
Q gi|254780746|r  143 KMKVKDNLRLDFETAVLDVKNITINSSDPVIITH  176 (215)
Q Consensus       143 ~i~~~~G~~l~t~~~~~d~~~~~i~s~~~V~~~~  176 (215)
                      +|...+ ..+.+..+.+|++.+.+...+.|.+.-
T Consensus       134 ~i~~~~-~~~~g~gm~~~l~~~~~~l~~~Vk~~y  166 (175)
T 3my2_A          134 TLYGTT-FNSSGLKMRGNLRSKNAELIEKVRTSY  166 (175)
T ss_dssp             EEEESS-CEEEEEEEEEETTTTEEEEEEEEEETT
T ss_pred             EEECCC-CEEEEEEEEEECCCCEEEEECCEEEEE
T ss_conf             999299-699977899996389999940628999