RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= gi|254780746|ref|YP_003065159.1| hypothetical protein
CLIBASIA_03165 [Candidatus Liberibacter asiaticus str. psy62]
         (215 letters)



>d1qmga2 c.2.1.6 (A:82-307) Class II ketol-acid reductoisomerase
           (KARI) {Spinach (Spinacia oleracea) [TaxId: 3562]}
          Length = 226

 Score = 25.6 bits (56), Expect = 3.4
 Identities = 6/29 (20%), Positives = 14/29 (48%)

Query: 151 RLDFETAVLDVKNITINSSDPVIITHSDF 179
             DF+++V   + +T++  D  I+     
Sbjct: 4   TFDFDSSVFKKEKVTLSGHDEYIVRGGRN 32


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.325    0.137    0.392 

Gapped
Lambda     K      H
   0.267   0.0628    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 763,163
Number of extensions: 33284
Number of successful extensions: 104
Number of sequences better than 10.0: 1
Number of HSP's gapped: 104
Number of HSP's successfully gapped: 3
Length of query: 215
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 133
Effective length of database: 1,281,736
Effective search space: 170470888
Effective search space used: 170470888
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 51 (23.6 bits)