RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= gi|254780746|ref|YP_003065159.1| hypothetical protein CLIBASIA_03165 [Candidatus Liberibacter asiaticus str. psy62] (215 letters) >d1qmga2 c.2.1.6 (A:82-307) Class II ketol-acid reductoisomerase (KARI) {Spinach (Spinacia oleracea) [TaxId: 3562]} Length = 226 Score = 25.6 bits (56), Expect = 3.4 Identities = 6/29 (20%), Positives = 14/29 (48%) Query: 151 RLDFETAVLDVKNITINSSDPVIITHSDF 179 DF+++V + +T++ D I+ Sbjct: 4 TFDFDSSVFKKEKVTLSGHDEYIVRGGRN 32 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.325 0.137 0.392 Gapped Lambda K H 0.267 0.0628 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 763,163 Number of extensions: 33284 Number of successful extensions: 104 Number of sequences better than 10.0: 1 Number of HSP's gapped: 104 Number of HSP's successfully gapped: 3 Length of query: 215 Length of database: 2,407,596 Length adjustment: 82 Effective length of query: 133 Effective length of database: 1,281,736 Effective search space: 170470888 Effective search space used: 170470888 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 51 (23.6 bits)