HHsearch alignment for GI: 254780747 and conserved domain: COG0740

>COG0740 ClpP Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion].
Probab=99.67  E-value=9.5e-16  Score=119.07  Aligned_cols=162  Identities=23%  Similarity=0.263  Sum_probs=124.2

Q ss_pred             EEEEEEECCH--HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf             9976662386--99999999986189987999975888888899999999999841478679960332332232100011
Q gi|254780747|r   41 IAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS  118 (293)
Q Consensus        41 i~i~G~I~~~--~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~k~~kpvva~~~~~~~S~~Y~iAs~a  118 (293)
T Consensus        30 I~l~g~I~~~~a~~i~aqll~Lea~~~~k~I~lyINSpGG~V~aG~AIydtm~~i--k~~V~ti~~G~AaSmgs~l~~aG  107 (200)
T COG0740          30 IFLGGEIEDHMANLIVAQLLFLEAEDPDKDIYLYINSPGGSVTAGLAIYDTMQFI--KPPVSTICMGQAASMGSVLLMAG  107 (200)
T ss_pred             EEEEEEECHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHC--CCCEEEEEECHHHHHHHHHHHCC
T ss_conf             9996422507788899999999833998986999968996610569999999855--99869997467876899999658


Q ss_pred             CCC--CCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             100--013013534555653021024567774204225531552112346667899998877777666667789999851
Q gi|254780747|r  119 NII--VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES  196 (293)
Q Consensus       119 d~I--~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~  196 (293)
T Consensus       108 ~~g~r~~lPnsrim------IHqP~----------------gg-------~~-G~a~Di~i~A~ei~~~~~~l~~i~a~~  157 (200)
T COG0740         108 DKGKRFALPNARIM------IHQPS----------------GG-------AQ-GQASDIEIHAREILKIKERLNRIYAEH  157 (200)
T ss_pred             CCCCCEECCCCEEE------EECCC----------------CC-------CC-CCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             87871367864389------86687----------------56-------76-678799999999999999999999988


Q ss_pred             CCCCHHHHHHHHC-CCCCCHHHHHHCCCCCCCCCHHHHH
Q ss_conf             4999889988734-9823788998779806238989999
Q gi|254780747|r  197 RNIPYDKTLVLSD-GRIWTGAEAKKVGLIDVVGGQEEVW  234 (293)
Q Consensus       197 R~~~~~~~~~~~~-g~~~~~~~A~~~GLvD~ig~~~~a~  234 (293)
T Consensus       158 TGq~~e~i~~d~drd~~msa~eA~~yGLiD~V~~~~~~~  196 (200)
T COG0740         158 TGQTLEKIEKDTDRDTWMSAEEAKEYGLIDKVIESREAA  196 (200)
T ss_pred             HCCCHHHHHHHHCCCCCCCHHHHHHCCCCCEECCCCCCC
T ss_conf             099889999861234457999999748855321333212