HHsearch alignment for GI: 254780747 and conserved domain: COG0740
>COG0740 ClpP Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion].
Probab=99.67 E-value=9.5e-16 Score=119.07 Aligned_cols=162 Identities=23% Similarity=0.263 Sum_probs=124.2
Q ss_pred EEEEEEECCH--HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 9976662386--99999999986189987999975888888899999999999841478679960332332232100011
Q gi|254780747|r 41 IAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 (293)
Q Consensus 41 i~i~G~I~~~--~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~k~~kpvva~~~~~~~S~~Y~iAs~a 118 (293)
T Consensus 30 I~l~g~I~~~~a~~i~aqll~Lea~~~~k~I~lyINSpGG~V~aG~AIydtm~~i--k~~V~ti~~G~AaSmgs~l~~aG 107 (200)
T COG0740 30 IFLGGEIEDHMANLIVAQLLFLEAEDPDKDIYLYINSPGGSVTAGLAIYDTMQFI--KPPVSTICMGQAASMGSVLLMAG 107 (200)
T ss_pred EEEEEEECHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHC--CCCEEEEEECHHHHHHHHHHHCC
T ss_conf 9996422507788899999999833998986999968996610569999999855--99869997467876899999658
Q ss_pred CCC--CCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 100--013013534555653021024567774204225531552112346667899998877777666667789999851
Q gi|254780747|r 119 NII--VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 (293)
Q Consensus 119 d~I--~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~ 196 (293)
T Consensus 108 ~~g~r~~lPnsrim------IHqP~----------------gg-------~~-G~a~Di~i~A~ei~~~~~~l~~i~a~~ 157 (200)
T COG0740 108 DKGKRFALPNARIM------IHQPS----------------GG-------AQ-GQASDIEIHAREILKIKERLNRIYAEH 157 (200)
T ss_pred CCCCCEECCCCEEE------EECCC----------------CC-------CC-CCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 87871367864389------86687----------------56-------76-678799999999999999999999988
Q ss_pred CCCCHHHHHHHHC-CCCCCHHHHHHCCCCCCCCCHHHHH
Q ss_conf 4999889988734-9823788998779806238989999
Q gi|254780747|r 197 RNIPYDKTLVLSD-GRIWTGAEAKKVGLIDVVGGQEEVW 234 (293)
Q Consensus 197 R~~~~~~~~~~~~-g~~~~~~~A~~~GLvD~ig~~~~a~ 234 (293)
T Consensus 158 TGq~~e~i~~d~drd~~msa~eA~~yGLiD~V~~~~~~~ 196 (200)
T COG0740 158 TGQTLEKIEKDTDRDTWMSAEEAKEYGLIDKVIESREAA 196 (200)
T ss_pred HCCCHHHHHHHHCCCCCCCHHHHHHCCCCCEECCCCCCC
T ss_conf 099889999861234457999999748855321333212