HHsearch alignment for GI: 254780747 and conserved domain: COG1024
>COG1024 CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism].
Probab=98.84 E-value=1.1e-07 Score=68.30 Aligned_cols=159 Identities=23% Similarity=0.255 Sum_probs=104.2
Q ss_pred CEEEEEEEEEEECC-------HHHHHHHHHHHHCCCCCCEEEEECCC----CCCCHHHHH-------------HHHHHHH
Q ss_conf 72899997666238-------69999999998618998799997588----888889999-------------9999999
Q gi|254780747|r 36 PHVARIAIRGQIED-------SQELIERIERISRDDSATALIVSLSS----PGGSAYAGE-------------AIFRAIQ 91 (293)
Q Consensus 36 ~~i~~i~i~G~I~~-------~~~l~~~l~~a~~d~~ik~ivL~i~S----pGG~~~~~~-------------~i~~ai~ 91 (293)
T Consensus 13 ~~v~~itl~rp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvltG~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 92 (257)
T COG1024 13 DGIAVITLNRPEKLNALNLEMLDELAEALDEAEADPDVRVVVLTGAGKAFSAGADLKELLSPEDGNAAENLMQPGQDLLR 92 (257)
T ss_pred CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 88899997067623588999999999999999629981699998189716717498877422310468888878899999
Q ss_pred HHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCC
Q ss_conf 841-4786799603323322321000111000130135345556530210245677742042255315521123466678
Q gi|254780747|r 92 KVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 (293)
Q Consensus 92 ~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~ 170 (293)
T Consensus 93 ~l~~~~kPvIAav~G~a~GgG~eLal~~D~ria~~~a~f~~pe~~------------iGl~pg----------------~ 144 (257)
T COG1024 93 ALADLPKPVIAAVNGYALGGGLELALACDIRIAAEDAKFGLPEVN------------LGLLPG----------------D 144 (257)
T ss_pred HHHHCCCCEEEEECCHHHHHHHHHHHHCCEEEECCCCEEECCCCC------------CCCCCC----------------C
T ss_conf 998589999998365014678899870887983477788554134------------265878----------------4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH-HHHCCCCCCHHHHHHCCCCCCCCCH-HHHHHHHHHHC
Q ss_conf 99998877777666667789999851499988998-8734982378899877980623898-99999999741
Q gi|254780747|r 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-VLSDGRIWTGAEAKKVGLIDVVGGQ-EEVWQSLYALG 241 (293)
Q Consensus 171 s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~~-~~~~g~~~~~~~A~~~GLvD~ig~~-~~a~~~l~~~~ 241 (293)
T Consensus 145 --g~~~~l~-----------------r~~G~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~~l~~~a~~~a 198 (257)
T COG1024 145 --GGTQRLP-----------------RLLGRGRAKELLLTGEPISAAEALELGLVDEVVPDAEELLERALELA 198 (257)
T ss_pred --CHHHHHH-----------------HHCCHHHHHHHHHCCCCCCHHHHHHCCCCCEECCCHHHHHHHHHHHH
T ss_conf --5889999-----------------97396889999982898889999978991466587688999999999