HHsearch alignment for GI: 254780747 and conserved domain: PRK03580

>PRK03580 carnitinyl-CoA dehydratase; Provisional.
Probab=99.04  E-value=5.5e-09  Score=76.51  Aligned_cols=161  Identities=21%  Similarity=0.246  Sum_probs=107.9

Q ss_pred             CCEEEEEEEEEEECC------HHHHHHHHHHHHCCCCCCEEEEECCC-----CCCCHHHHH-----------HHHHHHHH
Q ss_conf             872899997666238------69999999998618998799997588-----888889999-----------99999998
Q gi|254780747|r   35 SPHVARIAIRGQIED------SQELIERIERISRDDSATALIVSLSS-----PGGSAYAGE-----------AIFRAIQK   92 (293)
Q Consensus        35 ~~~i~~i~i~G~I~~------~~~l~~~l~~a~~d~~ik~ivL~i~S-----pGG~~~~~~-----------~i~~ai~~   92 (293)
T Consensus        11 ~g~Va~itlnrP~~NAl~~~m~~~l~~al~~~~~d~~vrvvvltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~   90 (262)
T PRK03580         11 NGSILEITLDRPKANAIDAKTSFAMGEVFLNFRDDPELRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTE   90 (262)
T ss_pred             ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCHHHHHHCCCCCCHHHHHHHHHHHHH
T ss_conf             99999999558764779999999999999998619996599996699960426710766534786431342667899999


Q ss_pred             HC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCC
Q ss_conf             41-47867996033233223210001110001301353455565302102456777420422553155211234666789
Q gi|254780747|r   93 VK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN  171 (293)
Q Consensus        93 ~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s  171 (293)
T Consensus        91 l~~~~kPvIaaV~G~a~GgG~~LalacD~~ia~~~a~f~~pe~------------~lGl~p~----------------~g  142 (262)
T PRK03580         91 IFDLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEA------------KLGIVPD----------------SG  142 (262)
T ss_pred             HHHCCCCEEEEECCEEEEHHHHHHHHCCEEEECCCCCEECHHH------------CCCCCCC----------------CC
T ss_conf             9819999999986866618699988527024147876515776------------0367888----------------54


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHC
Q ss_conf             9998877777666667789999851499988998873498237889987798062389899999999741
Q gi|254780747|r  172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG  241 (293)
Q Consensus       172 ~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~~  241 (293)
T Consensus       143 ~--~~-----------~l~r~iG~~~-----A~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~la  194 (262)
T PRK03580        143 G--VL-----------RLPKRLPPAI-----VNEMLMTGRRMDAEEALRWGLVNRVVSQAELMDRARELA  194 (262)
T ss_pred             H--HH-----------HHHHHHHHHH-----HHHHHHCCCCCCHHHHHHCCCEEEECCHHHHHHHHHHHH
T ss_conf             9--99-----------9999970999-----999987189875999988799105438469999999999