HHsearch alignment for GI: 254780747 and conserved domain: PRK08788

Probab=98.12  E-value=1.8e-05  Score=54.34  Aligned_cols=94  Identities=18%  Similarity=0.301  Sum_probs=61.3

Q ss_pred             CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHH
Q ss_conf             47867996033233223210001110001301353455565302102456777420422553155211234666789999
Q gi|254780747|r   95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA  174 (293)
Q Consensus        95 ~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s~e~  174 (293)
T Consensus       119 ~p~~tIAaV~G~a~GGG~elalacD~~IA~~~A~fg~pEv~------------lGl~P---------g~-------Gg--  168 (286)
T PRK08788        119 AGAISIALVQGNALGGGFEAALSHHTIIAEEGVKMGFPEIL------------FNLFP---------GM-------GA--  168 (286)
T ss_pred             CCCCEEEEECCEECHHHHHHHHHCCEEEECCCCEEECCCCC------------CCCCC---------CC-------HH--
T ss_conf             99846999847312577999997898997399886363013------------48687---------86-------07--


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCHH-HHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHH
Q ss_conf             8877777666667789999851499988-998873498237889987798062389899999
Q gi|254780747|r  175 VQMMQDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ  235 (293)
Q Consensus       175 ~~~~~~~l~~~~~~f~~~Va~~R~~~~~-~~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~  235 (293)
T Consensus       169 -----------~~~L~R------~iG~~~A~emiltG~~~sAeeA~~~GLVd~vvp~g~~~~  213 (286)
T PRK08788        169 -----------YSFLAR------RIGPQLAEELILSGKLYSAEELHDMGLVDQLVERGQGYA  213 (286)
T ss_pred             -----------HHHHHH------HHCHHHHHHHHHHCCCCCHHHHHHCCCCCEEECCCCHHH
T ss_conf             -----------889998------869999999998299168999997699838528984899