HHsearch alignment for GI: 254780747 and conserved domain: PRK10949

>PRK10949 protease 4; Provisional.
Probab=100.00  E-value=0  Score=397.17  Aligned_cols=231  Identities=29%  Similarity=0.448  Sum_probs=213.8

Q ss_pred             CCCCCCEEEEEEEEEEECC---------HHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCCEE
Q ss_conf             5677872899997666238---------699999999986189987999975888888899999999999841-478679
Q gi|254780747|r   31 VEDNSPHVARIAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK-NRKPVI  100 (293)
Q Consensus        31 ~~~~~~~i~~i~i~G~I~~---------~~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~k-~~kpvv  100 (293)
T Consensus       321 ~~~~~~~IAVI~a~G~Iv~G~~~~g~ig~dt~~~~lr~a~~D~~VKAvVLRVnSPGGSa~ASE~I~~el~~lk~~gKPVV  400 (618)
T PRK10949        321 PADTGGQIAVIFANGAIMDGEETPGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVV  400 (618)
T ss_pred             CCCCCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEE
T ss_conf             88779838999968768548887886655899999999730867228999985899866789999999999984499799


Q ss_pred             EEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             96033233223210001110001301353455565302102456777420422553155211234666789999887777
Q gi|254780747|r  101 TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD  180 (293)
Q Consensus       101 a~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s~e~~~~~~~  180 (293)
T Consensus       401 vSMG~vAASGGYwIa~~Ad~I~A~p~TITGSIGVfg~~p~~~~~l~~lGI~~D~V~t~~~a~~-s~~~~l~~~~~~~~q~  479 (618)
T PRK10949        401 VSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVINTVENSLDSIGVHTDGVSTSPLADV-SITKALPPEFQQMMQL  479 (618)
T ss_pred             EEECCCCCCCCEEEECCCCEEEECCCCEEEECEEEEEHHHHHHHHHHCCCEEEEEECCCCCCC-CCCCCCCHHHHHHHHH
T ss_conf             997010156625885168769988986788640477610499999964952468854567778-8777999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCHHH
Q ss_conf             76666677899998514999889988734982378899877980623898999999997418776530120144211245
Q gi|254780747|r  181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF  260 (293)
Q Consensus       181 ~l~~~~~~f~~~Va~~R~~~~~~~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~  260 (293)
T Consensus       480 ~i~~~Y~~Fl~~Va~gR~mt~e~Vd~iAqGRVWsG~~A~~~GLVD~LGgl~dAI~~Aa~lA~l~~-y~v~~~~~~~s~~e  558 (618)
T PRK10949        480 SIENGYKRFITLVADARHKTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKLKQ-WHLNWYVDEPTFFD  558 (618)
T ss_pred             HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCC-CEEEEECCCCCHHH
T ss_conf             99999999999998657999899998648837769999986893654999999999999749985-06786179999999


Q ss_pred             HHH
Q ss_conf             565
Q gi|254780747|r  261 CDL  263 (293)
Q Consensus       261 ~~~  263 (293)
T Consensus       559 ~~~  561 (618)
T PRK10949        559 MVM  561 (618)
T ss_pred             HHH
T ss_conf             999