HHsearch alignment for GI: 254780747 and conserved domain: PRK12551
>PRK12551 ATP-dependent Clp protease proteolytic subunit; Reviewed.
Probab=99.56 E-value=9.4e-14 Score=106.50 Aligned_cols=160 Identities=23% Similarity=0.302 Sum_probs=116.8
Q ss_pred EEEEEEEECCH--HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC
Q ss_conf 99976662386--9999999998618998799997588888889999999999984147867996033233223210001
Q gi|254780747|r 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCA 117 (293)
Q Consensus 40 ~i~i~G~I~~~--~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~k~~kpvva~~~~~~~S~~Y~iAs~ 117 (293)
T Consensus 27 iifl~~~i~~~~a~~ii~~ll~L~~e~~~k~I~lyINSpGG~v~~glaIyD~m~~~~--~~V~Ti~~G~aaS~as~il~a 104 (196)
T PRK12551 27 IIFLGEPVTSDSANRIVAQLLFLEAEDPEKDIYLYINSPGGSVYDGLGIFDTMQHVK--PDVHTVCVGLAASMGAFLLCA 104 (196)
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCC--CCEEEEEEEEEHHHHHHHHHC
T ss_conf 899898127899999999999860729799979999799866655699999996269--997999962402256789974
Q ss_pred CC--CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 11--0001301353455565302102456777420422553155211234666789999887777766666778999985
Q gi|254780747|r 118 SN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 (293)
Q Consensus 118 ad--~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~ 195 (293)
T Consensus 105 G~kgkR~~~pns~iMIH-----qp----------------~~~--------~~-G~a~di~~~a~el~~~~~~i~~i~a~ 154 (196)
T PRK12551 105 GAKGKRSSLQHSRIMIH-----QP----------------LGG--------AR-GQASDIRIQADEILFLKERLNTELSE 154 (196)
T ss_pred CCCCCCCCCCCCEEEEC-----CC----------------CCC--------CC-CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88886012656024770-----56----------------767--------56-75879999999999999999999999
Q ss_pred CCCCCHHHHHHHHCCC-CCCHHHHHHCCCCCCCCCHH
Q ss_conf 1499988998873498-23788998779806238989
Q gi|254780747|r 196 SRNIPYDKTLVLSDGR-IWTGAEAKKVGLIDVVGGQE 231 (293)
Q Consensus 196 ~R~~~~~~~~~~~~g~-~~~~~~A~~~GLvD~ig~~~ 231 (293)
T Consensus 155 ~Tg~~~~~I~~~~~rd~~msa~EA~~yGliD~Il~~r 191 (196)
T PRK12551 155 RTGQPLERIQEDTDRDFFMSPSEAVEYGLIDLVIDKR 191 (196)
T ss_pred HHCCCHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCC
T ss_conf 8795999999873578606799999829987860789