HHsearch alignment for GI: 254780747 and conserved domain: PRK12552
>PRK12552 ATP-dependent Clp protease-like protein; Reviewed.
Probab=99.38 E-value=7.2e-12 Score=94.64 Aligned_cols=158 Identities=20% Similarity=0.152 Sum_probs=109.3
Q ss_pred EEEEEEEECCHH------------HHHHHHHHHHCCCCCCEEEEECCCCC---------CCHHHHHHHHHHHHHHCCCCC
Q ss_conf 999766623869------------99999999861899879999758888---------888999999999998414786
Q gi|254780747|r 40 RIAIRGQIEDSQ------------ELIERIERISRDDSATALIVSLSSPG---------GSAYAGEAIFRAIQKVKNRKP 98 (293)
Q Consensus 40 ~i~i~G~I~~~~------------~l~~~l~~a~~d~~ik~ivL~i~SpG---------G~~~~~~~i~~ai~~~k~~kp 98 (293)
T Consensus 32 Iiflg~pi~~~d~~~~~~~~~vanliiAqLL~L~~ed~~k~I~lYINSpGgs~~~G~~~G~vt~~lAIyDtMq~Ik~--~ 109 (222)
T PRK12552 32 IVYLGLPLFSDDDAKRQLGMDVTELIIAQLLYLEFDDPEKPIYFYINSTGTSWYTGDAIGFETEAFAICDTMRYIKP--P 109 (222)
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCC--C
T ss_conf 89867865642001101207899999999998514389999799983899765567643432306789899851599--8
Q ss_pred EEEEECCCCCCCCCCCCCCCCC--CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHH
Q ss_conf 7996033233223210001110--00130135345556530210245677742042255315521123466678999988
Q gi|254780747|r 99 VITEVHEMAASAGYLISCASNI--IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 (293)
Q Consensus 99 vva~~~~~~~S~~Y~iAs~ad~--I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s~e~~~ 176 (293)
T Consensus 110 V~Tic~G~AaSmgalLLaaG~kGkR~alPnsriMiH-----QP-----------------~gg~-------~-GqAsDI~ 159 (222)
T PRK12552 110 VHTICIGQAMGTAAMILSAGTKGQRASLPHASIVLH-----QP-----------------RSGA-------R-GQATDIQ 159 (222)
T ss_pred EEEEEHHHHHHHHHHHHHCCCCCCCEECCCCHHHHC-----CC-----------------CCCC-------C-CCHHHHH
T ss_conf 578852787709999986388877212687113223-----87-----------------7677-------7-7799999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHC-CCCCCHHHHHHCCCCCCCCC
Q ss_conf 777776666677899998514999889988734-98237889987798062389
Q gi|254780747|r 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGAEAKKVGLIDVVGG 229 (293)
Q Consensus 177 ~~~~~l~~~~~~f~~~Va~~R~~~~~~~~~~~~-g~~~~~~~A~~~GLvD~ig~ 229 (293)
T Consensus 160 i~a~Eil~~r~~l~~ila~~TGq~~e~I~~d~~RD~~msA~EA~eYGLID~Il~ 213 (222)
T PRK12552 160 IRAKEVLHNKRTMLEILSRNTGQTVEKLSKDSDRMFYLTPQEAKEYGLIDRVLE 213 (222)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHCCCCEEEC
T ss_conf 999999999999999999987969999998718775678999998098768722