HHsearch alignment for GI: 254780747 and conserved domain: TIGR02280

>TIGR02280 PaaB1 phenylacetate degradation probable enoyl-CoA hydratase paaB; InterPro: IPR011968 This family of proteins are found within apparent operons for the degradation of phenylacetic acid . These proteins contain the enoyl-CoA hydratase domain. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE)..
Probab=97.45  E-value=0.00057  Score=44.94  Aligned_cols=162  Identities=31%  Similarity=0.417  Sum_probs=110.6

Q ss_pred             CCEEEEEEEEEEEC--CH-----HHHHHHHHHHHCCCCCCEEEEE-----------CC----CCCCCHH----HHHHHHH
Q ss_conf             87289999766623--86-----9999999998618998799997-----------58----8888889----9999999
Q gi|254780747|r   35 SPHVARIAIRGQIE--DS-----QELIERIERISRDDSATALIVS-----------LS----SPGGSAY----AGEAIFR   88 (293)
Q Consensus        35 ~~~i~~i~i~G~I~--~~-----~~l~~~l~~a~~d~~ik~ivL~-----------i~----SpGG~~~----~~~~i~~   88 (293)
T Consensus         6 ~~GV~~LTLNRPd~LNSF~~~MH~~l~~aL~~ver~~~~R~l~LTGAGRGFcAGQDL~dr~v~~~G~~pDLG~~ve~fYn   85 (259)
T TIGR02280         6 EKGVARLTLNRPDKLNSFTAEMHAELREALERVERDDDARALLLTGAGRGFCAGQDLSDRNVTPGGAAPDLGETVEKFYN   85 (259)
T ss_pred             HCCEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC
T ss_conf             25601431377001024008899999999866401575458887388874344655544678874225853221777507


Q ss_pred             -HHHHHCC-CCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCC
Q ss_conf             -9998414-78679960332332232100011100013013534555653021024567774204225531552112346
Q gi|254780747|r   89 -AIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP  166 (293)
Q Consensus        89 -ai~~~k~-~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p  166 (293)
T Consensus        86 PLvRrL~~Lp~PVv~AVNGVAAGAGAnLALAcDIvlAa~sA~------------FiqAF~klGL~PD--------sGGTw  145 (259)
T TIGR02280        86 PLVRRLRALPKPVVCAVNGVAAGAGANLALACDIVLAARSAK------------FIQAFAKLGLIPD--------SGGTW  145 (259)
T ss_pred             HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHCCCCC--------CCCHH
T ss_conf             489999726997798535103447788887511999987557------------9988875246779--------85000


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHH-HHHHHHHHHCC
Q ss_conf             66789999887777766666778999985149998899887349823788998779806238989-99999997418
Q gi|254780747|r  167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE-EVWQSLYALGV  242 (293)
Q Consensus       167 ~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~~~~~~g~~~~~~~A~~~GLvD~ig~~~-~a~~~l~~~~~  242 (293)
T Consensus       146 ~LP---------------------r~vG~ARA----~GLAl-lG~~LdA~~A~~WGLIW~~v~D~k~L~~~~~~LA~  196 (259)
T TIGR02280       146 LLP---------------------RLVGRARA----MGLAL-LGEKLDARTAAEWGLIWQVVDDAKALMDEAQALAA  196 (259)
T ss_pred             HHH---------------------HHHHHHHH----HHHHH-HCCCCCHHHHHHCCCEEEEEHHHHHHHHHHHHHHH
T ss_conf             466---------------------89999999----99885-04846868897438644220057899999999999