HHsearch alignment for GI: 254780747 and conserved domain: TIGR02717
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain; InterPro: IPR014089 This group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which they have been characterised , , . In most species this protein is bifunctional, existing as fused alpha-beta domains. In Pyrococcus and related species, however, the domains exist as separate polypeptides. This entry represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. One of these (along with its beta-domain partner) was characterised as ACS-II showing specificity for phenylacetyl-CoA . This entry excludes non-ACS-I paralogs. .
Probab=92.86 E-value=0.27 Score=28.09 Aligned_cols=99 Identities=15% Similarity=0.257 Sum_probs=65.1
Q ss_pred CCEEEEEEEEEEECCH-----------------------HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 8728999976662386-----------------------99999999986189987999975888888899999999999
Q gi|254780747|r 35 SPHVARIAIRGQIEDS-----------------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 (293)
Q Consensus 35 ~~~i~~i~i~G~I~~~-----------------------~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~ 91 (293)
T Consensus 153 ~G~Iaf~SQSGAl~~a~Ldwa~~~~vGfS~~VS~GNkAD~~e~Dlley~~~D~~T~~I~~Y~Eg~~----DG~~Fl~~A~ 228 (457)
T TIGR02717 153 KGGIAFISQSGALLTALLDWAEKNGVGFSYFVSLGNKADIDESDLLEYLADDPDTKVILLYLEGIK----DGRKFLKTAK 228 (457)
T ss_pred CCCEEEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCEECCHHHHHHHHHCCCCCCEEEEECCCCC----CHHHHHHHHH
T ss_conf 887778971258999999999872781347782674111165778889853989408999717870----4168999988
Q ss_pred HHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 84147867996033233223210001110001301353455565302102456777420
Q gi|254780747|r 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 (293)
Q Consensus 92 ~~k~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi 150 (293)
T Consensus 229 ~~s~~KPiv~lKsG~s~~GakAA~SH-------TGaLAGs~------~~y~aaf~q~G~ 274 (457)
T TIGR02717 229 EISKKKPIVVLKSGTSEAGAKAASSH-------TGALAGSD------EAYDAAFKQAGV 274 (457)
T ss_pred HHHHCCCEEEEECCCCHHHHHHHHHC-------CCHHHHHH------HHHHHHHCCCCE
T ss_conf 86305988999368883456765210-------23133668------999987430143