HHsearch results for GI: 254780747 and protein with PDBid: 3bf0_A
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=100.00 E-value=0 Score=387.88 Aligned_cols=228 Identities=29% Similarity=0.456 Sum_probs=212.1
Q ss_pred CCCCCEEEEEEEEEEECC---------HHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC-CCCEEE
Q ss_conf 677872899997666238---------6999999999861899879999758888888999999999998414-786799
Q gi|254780747|r 32 EDNSPHVARIAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVIT 101 (293)
Q Consensus 32 ~~~~~~i~~i~i~G~I~~---------~~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~k~-~kpvva 101 (293)
...+++|++|.++|+|++ .+.+++.|++|.+|++||||+|+||||||++.++++|+++|+++|+ +||||+
T Consensus 297 ~~~~~~Iavi~~~G~I~~g~~~~~~~~~~~~~~~l~~a~~d~~vkavvLrInSpGGs~~as~~i~~~i~~~k~~~KPVv~ 376 (593)
T 3bf0_A 297 ADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVV 376 (593)
T ss_dssp CCCSCEEEEEEEEEEEESSSSCTTSEEHHHHHHHHHHHHHCTTEEEEEEEEEEEEECHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCCCEEEEEEECCEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 45678405999634240477767876617889999866507542179999979898577899999999999854997899
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 60332332232100011100013013534555653021024567774204225531552112346667899998877777
Q gi|254780747|r 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 (293)
Q Consensus 102 ~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s~e~~~~~~~~ 181 (293)
+++++|+||||||||+||+|||+|+|++|||||++..++++++++|+||+.+.+++|++|+. +|++++++++++.+|..
T Consensus 377 ~~~~~aASggY~ia~~ad~I~A~p~titGSIGV~~~~~~~~~~~~k~Gi~~~~v~~g~~~~~-~~~~~~~~e~~~~~q~~ 455 (593)
T 3bf0_A 377 SMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQLMMQLS 455 (593)
T ss_dssp EEEEEEETHHHHTTTTCSEEEECTTCEEECCCEEEEEEECHHHHHHTTCEEECCBSCGGGCC-CTTSCCCHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHCCCEEEECCCCEEEECCEEEECCCHHHHHHHCCCEEEEEECCCCCCC-CCCCCCCHHHHHHHHHH
T ss_conf 98786641555765336747866865144222047515688888867953666543556767-86667998999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHH
Q ss_conf 66666778999985149998899887349823788998779806238989999999974187765301201442112455
Q gi|254780747|r 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFC 261 (293)
Q Consensus 182 l~~~~~~f~~~Va~~R~~~~~~~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 261 (293)
++++|++|++.|+++|+++.++++++++|++|+|+||+++||||+||++++|+++++++++..+ ..++.|+++.++...
T Consensus 456 ~~~~y~~F~~~Va~~R~~~~~~v~~ia~Grv~tg~~A~~~GLVD~iG~~~~ai~~a~~~a~l~~-~~v~~~~~~~~~~~~ 534 (593)
T 3bf0_A 456 IENGYKRFITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHLEYYVDEPTFFDK 534 (593)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHTTCTTCEEEHHHHHHHTSCSEECCHHHHHHHHHHHSCSCC-EEEEC----------
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCC-CEEEECCCCCCHHHH
T ss_conf 9999999999998636999678787558758878999886997545999999999999749996-436762789999999