RPSBLAST alignment for GI: 254780747 and conserved domain: cd06558
>gnl|CDD|119339 cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.. Length = 195
Score = 48.7 bits (117), Expect = 2e-06
Identities = 43/209 (20%), Positives = 73/209 (34%), Gaps = 65/209 (31%)
Query: 51 QELIERIERISRDDSATALIVS--------------LSSPGGSAYAGEAIFRAIQKV--- 93
EL ++ D ++++ L++ + A R +Q++
Sbjct: 29 DELAAALDEAEADPDVRVVVLTGAGKAFCAGADLKELAALSDAGEEARAFIRELQELLRA 88
Query: 94 --KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151
+ KPVI V+ A G ++ A +I +AAE + F P V KLG+
Sbjct: 89 LLRLPKPVIAAVNGAALGGGLELALACDIRIAAEDA-------KFGLPEV-----KLGLV 136
Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211
P RLV +R + L+L+ GR
Sbjct: 137 ------------PGG-----------------GGTQRLPRLVGPARA----RELLLT-GR 162
Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240
+ EA ++GL+D V EE+ + L
Sbjct: 163 RISAEEALELGLVDEVVPDEELLAAALEL 191