HHsearch alignment for GI: 254780748 and conserved domain: PRK10664
>PRK10664 transcriptional regulator HU subunit beta; Provisional.
Probab=99.94 E-value=1.3e-26 Score=190.52 Aligned_cols=90 Identities=38% Similarity=0.627 Sum_probs=88.8
Q ss_pred CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCEECCCCCCEEEECCCCEEEE
Q ss_conf 98899999999973899989999999999999999986498512034578886214654102588988899468734676
Q gi|254780748|r 1 MIKSSLIGTIAKKNPKLNYQDVEKIVNMLLEEMTQALANGGRVEIRGFGSFSVRKRAARLARAPLAQKVISVEEKMVPFF 80 (100)
Q Consensus 1 MtK~eli~~ia~~~~~ls~~~~~~~vd~~~~~i~~~L~~~~~V~i~gfGtF~~~~~~~r~~rNP~Tge~i~i~~~~~v~F 80 (100)
T Consensus 1 M~K~eLi~~ia~~~-~ltk~~a~~~v~~~~~~i~~~l~~g~~V~l~gFGtF~v~~r~aR~grNP~Tge~i~Ipa~~v~~F 79 (90)
T PRK10664 1 MNKSQLIDKIAAGA-DISKAAAGRALDAIIASVTESLKEGDDVALVGFGTFAVKERAARTGRNPQTGKEITIAAAKVPSF 79 (90)
T ss_pred CCHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEECCCCCCCCCCCCEEEECCCCCEEE
T ss_conf 97899999999870-99999999999999999999997799399800589999876672560919998898658654777
Q ss_pred CCCHHHHHHHC
Q ss_conf 26989999707
Q gi|254780748|r 81 RAGKNLKERLN 91 (100)
Q Consensus 81 k~sk~lk~~iN 91 (100)
T Consensus 80 k~sk~LK~~vN 90 (90)
T PRK10664 80 RAGKALKDAVN 90 (90)
T ss_pred CCCHHHHHHHC
T ss_conf 47989998539