HHsearch alignment for GI: 254780748 and conserved domain: pfam00216

Probab=99.92  E-value=1.2e-24  Score=178.09  Aligned_cols=90  Identities=46%  Similarity=0.705  Sum_probs=88.6

Q ss_pred             CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCEECCCCCCEEEECCCCEEEE
Q ss_conf             98899999999973899989999999999999999986498512034578886214654102588988899468734676
Q gi|254780748|r    1 MIKSSLIGTIAKKNPKLNYQDVEKIVNMLLEEMTQALANGGRVEIRGFGSFSVRKRAARLARAPLAQKVISVEEKMVPFF   80 (100)
Q Consensus         1 MtK~eli~~ia~~~~~ls~~~~~~~vd~~~~~i~~~L~~~~~V~i~gfGtF~~~~~~~r~~rNP~Tge~i~i~~~~~v~F   80 (100)
T Consensus         1 mtK~~li~~ia~~~-~ls~~~~~~~v~~~~~~i~~~L~~~~~v~i~gfG~F~~~~~~~r~~rNP~Tge~i~i~~~~~v~F   79 (90)
T pfam00216         1 MTKKELIKAIAEKT-GLSKKDAEAIVDAFLDVITEALKKGEKVELRGFGTFEVRERKARTGRNPKTGEEIKIPAKKVVKF   79 (90)
T ss_pred             CCHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEEEEECCEEEECCCCCCEEEECCCCCEEE
T ss_conf             97899999999864-96999999999999999999996799498554589999960565428869997899759765898


Q ss_pred             CCCHHHHHHHC
Q ss_conf             26989999707
Q gi|254780748|r   81 RAGKNLKERLN   91 (100)
Q Consensus        81 k~sk~lk~~iN   91 (100)
T Consensus        80 k~sk~lk~~iN   90 (90)
T pfam00216        80 KPGKELKEAVN   90 (90)
T ss_pred             ECCHHHHHHHC
T ss_conf             06989998639