HHsearch alignment of GI: 254780748 and MMDB domain: 1hue_A_
>1hue_A (A:) HU protein; DNA-binding; NMR {Geobacillus stearothermophilus}
Probab=99.88 E-value=6e-23 Score=166.93 Aligned_cols=90 Identities=37% Similarity=0.655 Sum_probs=88.0
Q ss_pred CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCEECCCCCCEEEECCCCEEEE
Q ss_conf 98899999999973899989999999999999999986498512034578886214654102588988899468734676
Q gi|254780748|r 1 MIKSSLIGTIAKKNPKLNYQDVEKIVNMLLEEMTQALANGGRVEIRGFGSFSVRKRAARLARAPLAQKVISVEEKMVPFF 80 (100)
Q Consensus 1 MtK~eli~~ia~~~~~ls~~~~~~~vd~~~~~i~~~L~~~~~V~i~gfGtF~~~~~~~r~~rNP~Tge~i~i~~~~~v~F 80 (100)
|||+|||..|++++ ++++++++.++|+|++.|.++|.+|++|+|+|||+|+++.+++|.++||+|||.+.+||+++|+|
T Consensus 1 Mtk~~li~~i~~~~-~~s~~~v~~~i~~~~~~i~~~L~~~~~v~l~~fG~F~v~~~~~r~~~Np~Tge~~~i~~k~~vkF 79 (90)
T 1hue_A 1 MNKTELINAVAETS-GLSKKDATKAVDAVFDSITEALRKGDKVQLIGFGNFEVRERAARKGRNPQTGEEMEIPASKVPAF 79 (90)
T ss_dssp CBSHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHHTCCCCBTTTBEECCCCCCCCEEECSSSSSEEECCCCCCCCE
T ss_pred CCHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEEEECCCCCCCCCCCCEEEECCCCEEEE
T ss_conf 97899999999854-98999999999999999999996598288402439999861684455839998899548741898
Q ss_pred CCCHHHHHHHC
Q ss_conf 26989999707
Q gi|254780748|r 81 RAGKNLKERLN 91 (100)
Q Consensus 81 k~sk~lk~~iN 91 (100)
+||+.|+++|.
T Consensus 80 r~sk~lk~~ik 90 (90)
T 1hue_A 80 KPGKALKDAVK 90 (90)
T ss_dssp ECTTHHHHHTC
T ss_pred ECCHHHHHHHC
T ss_conf 13989998639