HHsearch alignment of GI: 254780748 and MMDB domain: 2iie_A_
>2iie_A (A:) Integration HOST factor; DNA kinking, bending, U-turn, intercalation, divalent, metal, recombination/DNA complex; HET: DNA; 2.41A {Escherichia coli} PDB: 2iif_A*
Probab=99.67 E-value=8.3e-17 Score=127.97 Aligned_cols=71 Identities=38% Similarity=0.630 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCEECCCCCCEEEECCCCEEEECCCHHHHHHHCCCCCC
Q ss_conf 99999999999864985120345788862146541025889888994687346762698999970786100
Q gi|254780748|r 26 VNMLLEEMTQALANGGRVEIRGFGSFSVRKRAARLARAPLAQKVISVEEKMVPFFRAGKNLKERLNSPDST 96 (100)
Q Consensus 26 vd~~~~~i~~~L~~~~~V~i~gfGtF~~~~~~~r~~rNP~Tge~i~i~~~~~v~Fk~sk~lk~~iN~~~~~ 96 (100)
.+.+++.+.++|..++.|+|+|||+|+++.+++|.||||+|||.|.||++++|+|+||+.|+++||+....
T Consensus 127 ~~k~LK~iveaL~~ge~V~i~~fG~F~~~~r~~R~grNP~Tge~i~Ipa~~~~~Fk~~k~lk~~vn~~~~~ 197 (204)
T 2iie_A 127 PGQKLKSRVENAGGGERIEIRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRANIYGGS 197 (204)
T ss_dssp ECHHHHHHHHHHCCCCCEEETTTEEEEEEEECCEEEECTTTCCEEEECCEEEEEEEECHHHHHHHCSSCCS
T ss_pred ECHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCEEECCCHHHHHHHCCCCCC
T ss_conf 54799988641344654222656889987406735619299998886597536878788999987579998