HHsearch results for GI: 254780748 and protein with PDBid: 2np2_A

>2np2_A HBB; protein-DNA complex, DNA-binding protein, DNA-bending protein, dnabii family, HU/IHF family, DNA binding protein/DNA complex; 3.02A {Borrelia burgdorferi}
Probab=99.91  E-value=6.6e-25  Score=178.39  Aligned_cols=95  Identities=35%  Similarity=0.590  Sum_probs=90.1

Q ss_pred             CCHHHHHHHHHHH----CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCC-CEECCCCCCEEEECCC
Q ss_conf             9889999999997----3899989999999999999999986498512034578886214654-1025889888994687
Q gi|254780748|r    1 MIKSSLIGTIAKK----NPKLNYQDVEKIVNMLLEEMTQALANGGRVEIRGFGSFSVRKRAAR-LARAPLAQKVISVEEK   75 (100)
Q Consensus         1 MtK~eli~~ia~~----~~~ls~~~~~~~vd~~~~~i~~~L~~~~~V~i~gfGtF~~~~~~~r-~~rNP~Tge~i~i~~~   75 (100)
                      |||+|||+.||++    ++++++++++.++|.|+++|.++|.+|++|+|+|||+|+++.+++| .||||+|||.+.||++
T Consensus         9 mtK~dli~~ia~~~~~~~~~lsk~~~~~~vd~~~~~I~~~L~~g~~V~i~gFGtF~~k~r~~R~~~rNPkTge~i~i~~~   88 (108)
T 2np2_A            9 VTKSDIVDQIALNIKNNNLKLEKKYIRLVIDAFFEELKSNLCSNNVIEFRSFGTFEVRKRKGRLNARNPQTGEYVKVLDH   88 (108)
T ss_dssp             EEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEETTTEEEEEEEECCBSSCBCTTTCCBCCBCCE
T ss_pred             CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEEECCCCCCCCCCCCCCEEEECCC
T ss_conf             65999999999750223489689999999999999999999779959973588998871058766619499988885487


Q ss_pred             CEEEECCCHHHHHHHCCCCC
Q ss_conf             34676269899997078610
Q gi|254780748|r   76 MVPFFRAGKNLKERLNSPDS   95 (100)
Q Consensus        76 ~~v~Fk~sk~lk~~iN~~~~   95 (100)
                      ++|+|+||+.|+++||+..+
T Consensus        89 ~~v~Fk~sk~lk~~vn~~k~  108 (108)
T 2np2_A           89 HVAYFRPGKDLKERVWGIKG  108 (108)
T ss_dssp             EEEEEEECHHHHHHHHSCC-
T ss_pred             CCEEECCCHHHHHHHCCCCC
T ss_conf             66787279899999705689