HHsearch results for GI: 254780748 and protein with PDBid: 2np2_A
>2np2_A HBB; protein-DNA complex, DNA-binding protein, DNA-bending protein, dnabii family, HU/IHF family, DNA binding protein/DNA complex; 3.02A {Borrelia burgdorferi}
Probab=99.91 E-value=6.6e-25 Score=178.39 Aligned_cols=95 Identities=35% Similarity=0.590 Sum_probs=90.1
Q ss_pred CCHHHHHHHHHHH----CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCC-CEECCCCCCEEEECCC
Q ss_conf 9889999999997----3899989999999999999999986498512034578886214654-1025889888994687
Q gi|254780748|r 1 MIKSSLIGTIAKK----NPKLNYQDVEKIVNMLLEEMTQALANGGRVEIRGFGSFSVRKRAAR-LARAPLAQKVISVEEK 75 (100)
Q Consensus 1 MtK~eli~~ia~~----~~~ls~~~~~~~vd~~~~~i~~~L~~~~~V~i~gfGtF~~~~~~~r-~~rNP~Tge~i~i~~~ 75 (100)
|||+|||+.||++ ++++++++++.++|.|+++|.++|.+|++|+|+|||+|+++.+++| .||||+|||.+.||++
T Consensus 9 mtK~dli~~ia~~~~~~~~~lsk~~~~~~vd~~~~~I~~~L~~g~~V~i~gFGtF~~k~r~~R~~~rNPkTge~i~i~~~ 88 (108)
T 2np2_A 9 VTKSDIVDQIALNIKNNNLKLEKKYIRLVIDAFFEELKSNLCSNNVIEFRSFGTFEVRKRKGRLNARNPQTGEYVKVLDH 88 (108)
T ss_dssp EEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEETTTEEEEEEEECCBSSCBCTTTCCBCCBCCE
T ss_pred CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEEECCCCCCCCCCCCCCEEEECCC
T ss_conf 65999999999750223489689999999999999999999779959973588998871058766619499988885487
Q ss_pred CEEEECCCHHHHHHHCCCCC
Q ss_conf 34676269899997078610
Q gi|254780748|r 76 MVPFFRAGKNLKERLNSPDS 95 (100)
Q Consensus 76 ~~v~Fk~sk~lk~~iN~~~~ 95 (100)
++|+|+||+.|+++||+..+
T Consensus 89 ~~v~Fk~sk~lk~~vn~~k~ 108 (108)
T 2np2_A 89 HVAYFRPGKDLKERVWGIKG 108 (108)
T ss_dssp EEEEEEECHHHHHHHHSCC-
T ss_pred CCEEECCCHHHHHHHCCCCC
T ss_conf 66787279899999705689