HHSEARCH alignment of GI: 254780748 and SCOP domain: d1owfa_

Alignment
>d1owfa_ a.55.1.1 (A:) Integration host factor alpha subunit (IHFA) {Escherichia coli [TaxId: 562]}
Probab=99.93  E-value=7.1e-26  Score=183.05  Aligned_cols=94  Identities=30%  Similarity=0.569  Sum_probs=91.8

Q ss_pred             CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCEECCCCCCEEEECCCCEEEE
Q ss_conf             98899999999973899989999999999999999986498512034578886214654102588988899468734676
Q gi|254780748|r    1 MIKSSLIGTIAKKNPKLNYQDVEKIVNMLLEEMTQALANGGRVEIRGFGSFSVRKRAARLARAPLAQKVISVEEKMVPFF   80 (100)
Q Consensus         1 MtK~eli~~ia~~~~~ls~~~~~~~vd~~~~~i~~~L~~~~~V~i~gfGtF~~~~~~~r~~rNP~Tge~i~i~~~~~v~F   80 (100)
                      |||+|||+.||+++ ++++++++.++|+|++.|.++|.+|++|+|+|||+|+++.+++|.||||+|||.++||++++|+|
T Consensus         2 mTK~eli~~ia~~~-~lsk~~~~~~~~~~~~~i~~~L~~g~~V~l~gfGtF~~~~~~~r~~rNP~Tge~i~ip~~~~v~F   80 (96)
T d1owfa_           2 LTKAEMSEYLFDKL-GLSKRDAKELVELFFEEIRRALENGEQVKLSGFGNFDLRDKNQRPGRNPKTGEDIPITARRVVTF   80 (96)
T ss_dssp             BCHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHTTCCEEETTTEEEEEEEECCEEEECSSSCCEEEECCEEEEEE
T ss_pred             CCHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEEEECCCCCEECCCCCCEEEECCCCEEEE
T ss_conf             78899999999985-98999999999999999999985699799667778999960660126889998898548613899


Q ss_pred             CCCHHHHHHHCCCCC
Q ss_conf             269899997078610
Q gi|254780748|r   81 RAGKNLKERLNSPDS   95 (100)
Q Consensus        81 k~sk~lk~~iN~~~~   95 (100)
                      +||+.|++.||+..+
T Consensus        81 k~sk~lk~~vn~~~~   95 (96)
T d1owfa_          81 RPGQKLKSRVENASP   95 (96)
T ss_dssp             EECHHHHHHHHTCCC
T ss_pred             EECHHHHHHHHCCCC
T ss_conf             729999999835499


SCOP domain information

class: All alpha proteins
fold: IHF-like DNA-binding proteins
superfamily: IHF-like DNA-binding proteins
family: Prokaryotic DNA-bending protein
domain: Integration host factor alpha subunit (IHFA)
species: Escherichia coli [TaxId: 562]