RPSBLAST alignment of GI: 254780748 and SCOP domain: d2o97b1

Alignment

 Score = 76.8 bits (189), Expect = 5e-16
 Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 1/91 (1%)

Query: 1  MIKSSLIGTIAKKNPKLNYQDVEKIVNMLLEEMTQALANGGRVEIRGFGSFSVRKRAARL 60
          M KS LI  IA     ++     + ++ ++  +T++L  G  V + GFG+F+V++RAAR 
Sbjct: 1  MNKSQLIDKIAAG-ADISKAAAGRALDAIIASVTESLKEGDDVALVGFGTFAVKERAART 59

Query: 61 ARAPLAQKVISVEEKMVPFFRAGKNLKERLN 91
           R P   K I++    VP FRAGK LK+ +N
Sbjct: 60 GRNPQTGKEITIAAAKVPSFRAGKALKDAVN 90

SCOP domain information

class: All alpha proteins
fold: IHF-like DNA-binding proteins
superfamily: IHF-like DNA-binding proteins
family: Prokaryotic DNA-bending protein
domain: HU protein
species: Escherichia coli, beta-isoform [TaxId: 562]