HHsearch alignment for GI: 254780750 and conserved domain: COG0488
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].
Probab=97.95 E-value=0.0015 Score=44.96 Aligned_cols=134 Identities=25% Similarity=0.222 Sum_probs=75.7
Q ss_pred EEEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCEEEEEEECC----CCCCCC
Q ss_conf 4443456358777766439999677844078999999999999971985303532068221056765237----661138
Q gi|254780750|r 634 FIANDCDLSCPNDKNSGKLWLLTGPNMGGKSTFLRQNALIVIMAQMGSYVPASYAHIGIVDKLFSRVGSA----DNLASG 709 (920)
Q Consensus 634 fVpNdi~l~~~~~~~~~~~~iiTGpNmgGKSt~lRqval~vilAQiG~fVPA~~a~i~~~D~IftRiGa~----D~l~~g 709 (920)
T Consensus 336 ~l~~~~s~~i~----~gdrIaiiG~NG~GKSTLlk~l~g~~-~~~~G~v~~g~~v~igyf~Q~~~~l~~~~t~~d~l~~~ 410 (530)
T COG0488 336 LLLKDLSFRID----RGDRIAIVGPNGAGKSTLLKLLAGEL-GPLSGTVKVGETVKIGYFDQHRDELDPDKTVLEELSEG 410 (530)
T ss_pred EEECCCEEEEC----CCCEEEEECCCCCCHHHHHHHHHCCC-CCCCCEEEECCCEEEEEEEEEHHHCCCCCCHHHHHHHH
T ss_conf 46637267765----89889998999877899999985213-56772599579678999870031027667799999864
Q ss_pred CCH--------------HHHHHH-------------HHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 532--------------899999-------------99999995899856999325889880567999999999999726
Q gi|254780750|r 710 RST--------------FMVEMI-------------ETASILNQATNQSFVILDEIGRGTATLDGLSIAWATIEYLHETN 762 (920)
Q Consensus 710 ~ST--------------F~vEm~-------------e~~~IL~~at~~SLVllDElGrGTst~DG~aiA~aile~l~~~~ 762 (920)
T Consensus 411 ~~~~~e~~~r~~L~~f~F~~~~~~~~v~~LSGGEk~Rl~La~ll~~~pNvLlLDEP---TNhLDi~s~-eaLe~aL~~f~ 486 (530)
T COG0488 411 FPDGDEQEVRAYLGRFGFTGEDQEKPVGVLSGGEKARLLLAKLLLQPPNLLLLDEP---TNHLDIESL-EALEEALLDFE 486 (530)
T ss_pred CCCCCHHHHHHHHHHCCCCHHHHCCCHHHCCHHHHHHHHHHHHHCCCCCEEEECCC---CCCCCHHHH-HHHHHHHHHCC
T ss_conf 65432899999999849986796395222587799999999985669978997289---876798899-99999998589
Q ss_pred CCEEEEECCCHHHHH
Q ss_conf 984999748757976
Q gi|254780750|r 763 RCRGLLATHFHELTD 777 (920)
Q Consensus 763 ~~~~lfaTHy~eL~~ 777 (920)
T Consensus 487 Gt-vl~VSHDr~Fl~ 500 (530)
T COG0488 487 GT-VLLVSHDRYFLD 500 (530)
T ss_pred CE-EEEEECCHHHHH
T ss_conf 86-999948999998