HHsearch alignment for GI: 254780750 and conserved domain: COG1193
>COG1193 Mismatch repair ATPase (MutS family) [DNA replication, recombination, and repair].
Probab=100.00 E-value=0 Score=432.44 Aligned_cols=480 Identities=23% Similarity=0.290 Sum_probs=379.7
Q ss_pred HHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHH-HHHCHHHHHHH
Q ss_conf 76301234337899998631002345678989999997402212588999997520483444456775-21000021206
Q gi|254780750|r 316 KTIDYSITGAGGRLFAERIASPLTDSTKINTRLDSINFFIQNPILINPIQKILKSSPDVPRSLSRLKI-GRGEPKDIAVI 394 (920)
Q Consensus 316 ~~Ln~t~T~~G~RlLr~wL~~PL~d~~~I~~R~daVe~l~~~~~~~~~l~~~L~~i~DleRll~ri~~-~~~~p~dl~~L 394 (920)
T Consensus 15 ~~~~~~~s~~g~~~~~~--l~p~~~~~~i~~~~~e~~~~~~~~~~~g~--~~~~~l~~i~~~l~~~e~g~~l~~~el~~i 90 (753)
T COG1193 15 LLASYAQSSLGLEELKN--LKPRTDLELIEEELSETAEALDILEDEGL--PPLGGLNDVSEALGRLEKGGRLHVEELLEI 90 (753)
T ss_pred HHHHHCCCHHHHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHCCCC--CCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 99985468789999982--68654389998777778999998724688--881125545789898864243789999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 89999986556754302584577876765776789999999998543101221046010168541145579988638999
Q gi|254780750|r 395 RDGIRSGINILNLFLKNDLPEELRGAVEKLKKLPQSLEKTLSSMLSDDLPTFKRDGGFLRDGADASLDETRSLRDQSKRI 474 (920)
Q Consensus 395 ~~sl~~~~~i~~~l~~~~~~~~l~~~~~~l~~l~~~l~~~l~~~i~~~~~~~~~~~~~ik~g~d~eLD~lr~~~~~~~~~ 474 (920)
T Consensus 91 ~~~l~~~~~lkr~~~~~e~~~--~~~~~~~~~~~-~l~~~i~--------~~id~~g~i~d~as~~l~~ir~~lr~~~~~ 159 (753)
T COG1193 91 SDFLRGFRALKRAIKKLERIK--RTLALALIELS-DLELEIN--------IPIDDDGLIKDRASFELDAIRRQLRDLEEE 159 (753)
T ss_pred HHHHHHHHHHHHHHHHHHHHH--HHHHHHHHCCH-HHHHHHH--------HHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 999877999999999865678--88987510300-7999976--------410554443332058999988536779999
Q ss_pred HHHHHHHHHHHCCCCCC--CCCCCCCCEEEEEECCHHHHHCCCCCCCCCCEEEEEECCCCHHHHHH-HHHHHHHHHHHHH
Q ss_conf 99776877887388751--10255862237620411433344111687652798521200011134-5666433464377
Q gi|254780750|r 475 IASLQLKYAEETKIKNL--KIKHNNNLGYFIEVTSSSASVLKKDLESKDRFIHRQTMSNLTRFTTL-ELIDLENRITNAT 551 (920)
Q Consensus 475 l~~l~~~~~~~~~i~sL--ki~~n~~~gy~iEV~~~~~~~i~~~~~~~~~~i~~qt~~~~~Rf~t~-eL~~l~~~i~~~~ 551 (920)
T Consensus 160 ir~~l~~~~~~~~~~~L~e~~v~~r~~r~vlpvk~~fk~~i~-------giv~d~sssg~tl~ieP~~vv~l~n~~~~l~ 232 (753)
T COG1193 160 IRDKLESLIRSKEAKYLQDRIVTTRDGREVLPVKAEFKGAIK-------GIVHDTSSSGATLYIEPRSVVKLNNELRALL 232 (753)
T ss_pred HHHHHHHHHHHHHHHHHHHCEEECCCCEEEEHHHHHHHHHCC-------CEEEECCCCCCEEEECCHHHHHHCCHHHHHH
T ss_conf 999999987331567634104861388588578887665158-------5585512465702225437776345766531
Q ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEECCCCCHHHHHHHHHCCC
Q ss_conf 77764334478887654301125798888999867788778887752588512104787140000468058876310287
Q gi|254780750|r 552 NSALLIELESFEILSNAIIEQSESLDNASQVIAIIDISIALAILAKEQNYCRPIIDNSTNFIVKDGRHPIVEKTLKQQSS 631 (920)
Q Consensus 552 ~~~~~~e~~~~~~l~~~i~~~~~~l~~~~~~ia~lD~l~SlA~~a~~~~y~rP~i~~~~~l~i~~gRHPviE~~l~~~~~ 631 (920)
T Consensus 233 ~eE~~e~e~il~~lsa~v~~~~~~l~~~~~~~~~lD~i~Ak~~~~~~~~~v~P~~~~~~~l~l~~~~HPll~~------- 305 (753)
T COG1193 233 VEEDEEEERILRELSALVAPVIPELEILLEIIGELDFIEAKVRYAKALKGVKPDFSNDGVLELLDARHPLLKE------- 305 (753)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCC-------
T ss_conf 4204759999998788875516789888988633488998999887650578866787038740244866765-------
Q ss_pred CCEEEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHC-CCCCCCEEEEEEECCCCCCCCC
Q ss_conf 704443456358777766439999677844078999999999999971985303532-0682210567652376611385
Q gi|254780750|r 632 KPFIANDCDLSCPNDKNSGKLWLLTGPNMGGKSTFLRQNALIVIMAQMGSYVPASYA-HIGIVDKLFSRVGSADNLASGR 710 (920)
Q Consensus 632 ~~fVpNdi~l~~~~~~~~~~~~iiTGpNmgGKSt~lRqval~vilAQiG~fVPA~~a-~i~~~D~IftRiGa~D~l~~g~ 710 (920)
T Consensus 306 --~v~~~i~~~~-----e~~~l~ITGpN~GGKtvtLKTlgl~~lm~q~gl~i~a~~gsei~~F~~i~aDIGDeQsIeqsL 378 (753)
T COG1193 306 --DVPNDLELGE-----ELDRLIITGPNTGGKTVTLKTLGLLRLMAQSGLPIPALEGSELPVFVKIFADIGDEQSIEQSL 378 (753)
T ss_pred --CCCCCCCCCC-----CCCEEEEECCCCCCCEEHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHCCCCHHHHHHHH
T ss_conf --5665422561-----212124764788760216998899999997689703267871042777652458388788887
Q ss_pred CHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCEEEEEE
Q ss_conf 32899999999999958998569993258898805679999999999997269849997487579766430688589999
Q gi|254780750|r 711 STFMVEMIETASILNQATNQSFVILDEIGRGTATLDGLSIAWATIEYLHETNRCRGLLATHFHELTDLSKSLKRFHNATL 790 (920)
Q Consensus 711 STF~vEm~e~~~IL~~at~~SLVllDElGrGTst~DG~aiA~aile~l~~~~~~~~lfaTHy~eL~~l~~~~~~v~n~~~ 790 (920)
T Consensus 379 STFSshm~~i~~il~~~d--sLvl~DElg~GTdp~EgaaLai~ile~l~~~-~~~~v~tTH~~elk~~~~~~~~v~nas~ 455 (753)
T COG1193 379 STFSSHMTNIVEILEKAD--SLVLFDELGSGTDPDEGAALAIAILEDLLEK-PAKIVATTHYRELKALAAEREGVENASM 455 (753)
T ss_pred HHHHHHHHHHHHHHHHCC--HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC-CCCEEHHHHHHHHHHHHHCCHHHHCHHH
T ss_conf 312889999999985311--5677787605788424377799889999862-4404257558999998721022211021
Q ss_pred EEEEECCEEEEEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 9996099277877774478988778999998299989999999999
Q gi|254780750|r 791 QVSDSNEGIIFLHKVIPGIADHSYGIQVGKLAGLPNTVISRAYDIL 836 (920)
Q Consensus 791 ~~~~~~~~i~flykl~~G~~~~Sygi~vA~laG~p~~vi~~A~~~~ 836 (920)
T Consensus 456 ~fd~e--tL~ptY~l~~G~~g~S~Af~ia~rlGl~~~iie~a~~~~ 499 (753)
T COG1193 456 EFDAE--TLRPTYRLLEGVPGRSNAFDIALRLGLPEPIIEEAKTEF 499 (753)
T ss_pred HHHHH--HHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHC
T ss_conf 32387--766778876078661027999998399889999987750