HHsearch alignment for GI: 254780750 and conserved domain: PRK04296
>PRK04296 thymidine kinase; Provisional.
Probab=90.17 E-value=1.1 Score=23.70 Aligned_cols=147 Identities=20% Similarity=0.249 Sum_probs=71.6
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHH--CCCCCCHHHCCCCCCCEEEEEEECCC-CCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 43999967784407899999999999997--19853035320682210567652376-6113853289999999999995
Q gi|254780750|r 650 GKLWLLTGPNMGGKSTFLRQNALIVIMAQ--MGSYVPASYAHIGIVDKLFSRVGSAD-NLASGRSTFMVEMIETASILNQ 726 (920)
Q Consensus 650 ~~~~iiTGpNmgGKSt~lRqval~vilAQ--iG~fVPA~~a~i~~~D~IftRiGa~D-~l~~g~STF~vEm~e~~~IL~~ 726 (920)
T Consensus 2 g~L~~i~GpMfSGKTteLi~~~~~~~~~gkkvl~~kp~~D~Ry~~-~~I~Sh~g~~~~~~~v~~~---~~i~~~~~~~~~ 77 (197)
T PRK04296 2 AKLYFIYGAMNSGKSTELLQRAYNYEERGMKVLVFTPAIDDRYGE-GKVVSRIGLSREAILISSD---TDIFELIEEEHE 77 (197)
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC-CCEECCCCCEEEEEEECCH---HHHHHHHHHHHC
T ss_conf 559999934278889999999999998799599998534465777-8578678983468994878---999999987630
Q ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCC---CEEEEECC----CHHHHHH---HHHCCCEEEEEEEEEEEC
Q ss_conf 8998569993258898805679999999999997269---84999748----7579766---430688589999999609
Q gi|254780750|r 727 ATNQSFVILDEIGRGTATLDGLSIAWATIEYLHETNR---CRGLLATH----FHELTDL---SKSLKRFHNATLQVSDSN 796 (920)
Q Consensus 727 at~~SLVllDElGrGTst~DG~aiA~aile~l~~~~~---~~~lfaTH----y~eL~~l---~~~~~~v~n~~~~~~~~~ 796 (920)
T Consensus 78 ~~~~dvI~IDEaQFf~~-~~----i~~~~~~~~~~~~~Viv~GLd~Df~~~~F~~~~~Li~~Ad~V~kl~a~C~~C---g 149 (197)
T PRK04296 78 GGKIDCVLIDEAQFLDK-EQ----VVQLAEVVDDLGIPVICYGLDTDFRGEPFEGSPYLLALADKVTELKAICVHC---G 149 (197)
T ss_pred CCCCCEEEECCHHCCCH-HH----HHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEEEECCCC---C
T ss_conf 47856899720212798-99----9999999983185899976503302486543999997268099974397789---9
Q ss_pred CEEEEEEEEEEC
Q ss_conf 927787777447
Q gi|254780750|r 797 EGIIFLHKVIPG 808 (920)
Q Consensus 797 ~~i~flykl~~G 808 (920)
T Consensus 150 ~~A~fs~R~~~~ 161 (197)
T PRK04296 150 RKATMTQRLING 161 (197)
T ss_pred CEEEEEEEECCC
T ss_conf 931017999489