HHsearch alignment for GI: 254780750 and conserved domain: PRK05399
>PRK05399 DNA mismatch repair protein; Provisional.
Probab=100.00 E-value=0 Score=1947.74 Aligned_cols=842 Identities=44% Similarity=0.730 Sum_probs=777.3
Q ss_pred HHHHCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 67728916899999998779929999808822200799999998618189107889988876265617669999999998
Q gi|254780750|r 21 NLKSSTPMMRQYIEIKSINPDSLVFYRMGDFYELFFDDALLASRCLGITLTKRGKHLGKDIPMCGVPVHTANHYIQKLIK 100 (920)
Q Consensus 21 ~~~~~TP~~~Qy~~iK~~~~D~il~fr~G~FYE~f~~DA~~aa~~L~i~lt~r~~~~~~~~pmaGvP~~~l~~yl~~Lv~ 100 (920)
T Consensus 4 ~~~k~TPmm~Qy~~iK~~~~D~iLffr~GdFYElF~eDA~~as~~L~i~LT~R~~~~~~~~pm~GvP~ha~~~yl~kLv~ 83 (848)
T PRK05399 4 DLSKHTPMMQQYLEIKAQYPDALLFYRMGDFYELFFEDAKKASRLLDITLTKRGKSAGEPIPMAGVPYHAAEGYLAKLVK 83 (848)
T ss_pred CCCCCCHHHHHHHHHHHHCCCEEEEEECCCEEEECHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 42228989999999999789979999627310353888999998619699547888999888088978899999999998
Q ss_pred CCCEEEEEEECCCHHHHHHCCCCCCEEEEEEEEECCCCEECCHHCCCCCCCEEEEEEECCCEEEEEEEECCCCEEEEEEC
Q ss_conf 89859999502897887412899845545899977530302010387877369999952984999999978655999605
Q gi|254780750|r 101 IGHRIAICEQIESPLEAKKRGNKSLVRRNVVRLVTPGTLTEDQLLSPTDSNYLMAVARIRTEWAIAWIDISTGIFKISTS 180 (920)
Q Consensus 101 ~GykVaiveQ~E~p~~~~~~~~~~~v~R~Vt~IiTpGT~~d~~~l~~~~~nyL~aI~~~~~~~Gia~iDisTG~~~~~~~ 180 (920)
T Consensus 84 ~G~kVaiceQ~e~p~~~-----kg~v~R~V~rIiTPGT~~d~~~L~~~~~nyL~ai~~~~~~~gla~~DiSTGef~~~~~ 158 (848)
T PRK05399 84 KGYKVAICEQVEDPATA-----KGPVKREVVRIVTPGTVTDEALLDEKQNNYLAAIYQDKNRYGLAWLDLSTGEFRVTEL 158 (848)
T ss_pred CCCEEEEEECCCCCCCC-----CCCCCCCEEEEECCCCEECCCCCCCCCCCEEEEEEECCCEEEEEEEECCCCEEEEEEE
T ss_conf 79969999616782104-----9983203489987861347243688877679999967985999999966663999983
Q ss_pred C-HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCCCHHHH-HHHHHH
Q ss_conf 8-78999998522985799707768967899887423881571852114713447889987087864210244-434688
Q gi|254780750|r 181 N-HDRLISDIMRIDPREIIFSEKELSHAEYKSLFETLGNVAVAQPNVFFDHSISESRIADYYNITTVDTFGSF-SQVEKT 258 (920)
Q Consensus 181 ~-~d~l~~~L~~l~P~EIii~~~~~~~~~~~~l~~~~~~~~~~~~~~~f~~~~~~~~l~~~~~~~~l~~~~~~-~~~~~~ 258 (920)
T Consensus 159 ~~~~~L~~~L~r~~P~EIl~~~~~~~~~~-------~~~~~~~~~~~~f~~~~a~~~l~~~f~~~~l~~~g~~~~~~~~~ 231 (848)
T PRK05399 159 ADEEELLAELARLNPAEILLPEDLAELLL-------ILFGVTRRPDWEFDLDTAEKRLLEQFGVASLDGFGLEDLELALR 231 (848)
T ss_pred CCHHHHHHHHHHCCCCEEEECCCHHHHHH-------HHCCEEECCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCHHHHH
T ss_conf 89999999998449734874574024566-------42025547720058678999999984858813217667569999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCHHHCCEEEEECCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHC
Q ss_conf 87777643687411222222113445745401425133201545412787764127876301234337899998631002
Q gi|254780750|r 259 AAAAAISYIKKTQMVNKPTIGYPEREDIQSTLFIDSAARSNLEILRTLSGSREQSLLKTIDYSITGAGGRLFAERIASPL 338 (920)
Q Consensus 259 a~~all~Yl~~~~~~~~~~i~~~~~~~~~~~m~LD~~Tl~nLEI~~~~~g~~~gSL~~~Ln~t~T~~G~RlLr~wL~~PL 338 (920)
T Consensus 232 A~g~LL~YL~~tq~~~l~~i~~~~~~~~~~~M~LD~~T~rNLEL~~~~~g~-kgSLl~vLd~T~T~mG~RLLr~WL~~PL 310 (848)
T PRK05399 232 AAGALLQYLKETQKGSLPHLRSPKRYEEGDYLILDAATRRNLELTETLRGG-GGSLLSVLDRTVTAMGGRLLRRWLHRPL 310 (848)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEECHHHHHHHHHHCCCCCC-CCCHHHHHCCCCCHHHHHHHHHHHHHHC
T ss_conf 999999999986112334557775876789799887887468874167999-9857888477898589999999987356
Q ss_pred CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 34567898999999740221258899999752048344445677521000021206899999865567543025845778
Q gi|254780750|r 339 TDSTKINTRLDSINFFIQNPILINPIQKILKSSPDVPRSLSRLKIGRGEPKDIAVIRDGIRSGINILNLFLKNDLPEELR 418 (920)
Q Consensus 339 ~d~~~I~~R~daVe~l~~~~~~~~~l~~~L~~i~DleRll~ri~~~~~~p~dl~~L~~sl~~~~~i~~~l~~~~~~~~l~ 418 (920)
T Consensus 311 ~d~~~I~~RldaVe~l~~~~~~~~~lr~~Lk~i~DlERllsRi~~~~~~prDl~~L~~sL~~~~~i~~~l~~~---~~l~ 387 (848)
T PRK05399 311 RDREAINARLDAVEELLDNPLLREDLRELLKGVYDLERILSRVALGRANPRDLAALRDSLEALPELKELLEES---PLLA 387 (848)
T ss_pred CCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC---HHHH
T ss_conf 2778999999999999749799999999985489889999999808978899999999999999999998467---7899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 76765776789999999998543101221046010168541145579988638999997768778873887511025586
Q gi|254780750|r 419 GAVEKLKKLPQSLEKTLSSMLSDDLPTFKRDGGFLRDGADASLDETRSLRDQSKRIIASLQLKYAEETKIKNLKIKHNNN 498 (920)
Q Consensus 419 ~~~~~l~~l~~~l~~~l~~~i~~~~~~~~~~~~~ik~g~d~eLD~lr~~~~~~~~~l~~l~~~~~~~~~i~sLki~~n~~ 498 (920)
T Consensus 388 ~l~~~l~~~-~~l~~~i~~~i~~~~p~~~~dg~~Ik~G~d~eLDelr~~~~~~~~~l~~le~~er~~tgI~sLKi~yn~v 466 (848)
T PRK05399 388 ELLAQLDPL-PELADLLERAIVEEPPLLIRDGGVIADGYDAELDELRALSDNGKDWLAELEARERERTGISSLKVGYNKV 466 (848)
T ss_pred HHHHHCCCH-HHHHHHHHHHHHCCCHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCC
T ss_conf 998853148-9999999998710557554368863588798899999999868999999999999870865110111475
Q ss_pred CEEEEEECCHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf 22376204114333441116876527985212000111345666433464377777643344788876543011257988
Q gi|254780750|r 499 LGYFIEVTSSSASVLKKDLESKDRFIHRQTMSNLTRFTTLELIDLENRITNATNSALLIELESFEILSNAIIEQSESLDN 578 (920)
Q Consensus 499 ~gy~iEV~~~~~~~i~~~~~~~~~~i~~qt~~~~~Rf~t~eL~~l~~~i~~~~~~~~~~e~~~~~~l~~~i~~~~~~l~~ 578 (920)
T Consensus 467 ~GY~iEv~k~~~~~vp------~~~ir~qTl~n~~Rf~T~eL~~~e~~il~a~~~~~~lE~~~f~~l~~~~~~~~~~l~~ 540 (848)
T PRK05399 467 FGYYIEVTKANADKVP------DDYIRRQTLKNAERYITPELKELEDKILSAEERALALEKELFEELREEVLEHIERLQK 540 (848)
T ss_pred CEEEEEECHHHHHCCC------CCEEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 2289984043340498------4438876124871544588999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEECCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEEECC
Q ss_conf 88999867788778887752588512104787140000468058876310287704443456358777766439999677
Q gi|254780750|r 579 ASQVIAIIDISIALAILAKEQNYCRPIIDNSTNFIVKDGRHPIVEKTLKQQSSKPFIANDCDLSCPNDKNSGKLWLLTGP 658 (920)
Q Consensus 579 ~~~~ia~lD~l~SlA~~a~~~~y~rP~i~~~~~l~i~~gRHPviE~~l~~~~~~~fVpNdi~l~~~~~~~~~~~~iiTGp 658 (920)
T Consensus 541 ~~~~ia~LD~l~SlA~~A~~~~y~rP~i~~~~~l~I~~gRHPvvE~~~~----~~fVpND~~l~-----~~~~~~iiTGP 611 (848)
T PRK05399 541 LAKALAELDVLASLAEVAEELNYVRPEFTDSREIDIEAGRHPVVEQVLG----GPFVPNDCDLD-----PERRMLLITGP 611 (848)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEECCCCEEEECCC----CCEEEEEEEEC-----CCCCEEEEECC
T ss_conf 9999999999999999999669647713589865898356857640368----87576568866-----87617999568
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf 84407899999999999997198530353206822105676523766113853289999999999995899856999325
Q gi|254780750|r 659 NMGGKSTFLRQNALIVIMAQMGSYVPASYAHIGIVDKLFSRVGSADNLASGRSTFMVEMIETASILNQATNQSFVILDEI 738 (920)
Q Consensus 659 NmgGKSt~lRqval~vilAQiG~fVPA~~a~i~~~D~IftRiGa~D~l~~g~STF~vEm~e~~~IL~~at~~SLVllDEl 738 (920)
T Consensus 612 NM~GKSTylRQvalivilAQiGsfVPA~~a~i~i~D~IftRiGa~D~l~~g~STFmvEM~E~a~IL~~AT~~SLVilDEl 691 (848)
T PRK05399 612 NMAGKSTYMRQVALIVLLAQIGSFVPAKSARIGIVDRIFTRIGASDDLASGRSTFMVEMTETANILNNATERSLVLLDEI 691 (848)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 87770899999999999997089741876786555767773676300345787599999999999984898848999616
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCEEEEEEEEEEECCEEEEEEEEEECCCCCCHHHHH
Q ss_conf 88988056799999999999972698499974875797664306885899999996099277877774478988778999
Q gi|254780750|r 739 GRGTATLDGLSIAWATIEYLHETNRCRGLLATHFHELTDLSKSLKRFHNATLQVSDSNEGIIFLHKVIPGIADHSYGIQV 818 (920)
Q Consensus 739 GrGTst~DG~aiA~aile~l~~~~~~~~lfaTHy~eL~~l~~~~~~v~n~~~~~~~~~~~i~flykl~~G~~~~Sygi~v 818 (920)
T Consensus 692 GRGTST~DG~aIA~Av~e~l~~~~~~~tlFaTHyheL~~l~~~~~~v~n~h~~v~e-~~~i~Flykl~~G~~~~SyGi~V 770 (848)
T PRK05399 692 GRGTSTYDGLSIAWAVAEYLHDKIKARTLFATHYHELTELAEKLPGVKNVHVAAKE-DGDIVFLHKVVPGAADKSYGIHV 770 (848)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCEEEEEEEEEE-CCEEEEEEEECCCCCCCCHHHHH
T ss_conf 78888506799999999999865798699988757888776437782899999998-89278998767788987779999
Q ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC-CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHH
Q ss_conf 998299989999999999999876300011112111110000112003-5473899999860782227989999999999
Q gi|254780750|r 819 GKLAGLPNTVISRAYDILKTFEKLYHHNQKDMRLYYPEIQTKESKNNL-SKNDKLFVEKIKCLNLDEMSPLTALKTLYAV 897 (920)
Q Consensus 819 A~laG~p~~vi~~A~~~~~~le~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~al~~l~~l 897 (920)
T Consensus 771 A~lAGlP~~vi~rA~~~l~~lE~~~~~~~~~~~-------~~~q~~lf~~~~~~~~~~~l~~~~~~~~tp~~al~~l~~l 843 (848)
T PRK05399 771 AKLAGLPKSVIKRAREILAQLESASEKAAKAAA-------ESDQLSLFAAPEESPVLEALKALDPDELTPREALNLLYEL 843 (848)
T ss_pred HHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC-------CCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 998398999999999999998446554566667-------6322233368983699999970897779999999999999
Q ss_pred HHHHH
Q ss_conf 99986
Q gi|254780750|r 898 KAWTL 902 (920)
Q Consensus 898 k~~~~ 902 (920)
T Consensus 844 k~~~~ 848 (848)
T PRK05399 844 KKLLK 848 (848)
T ss_pred HHHHC
T ss_conf 99629