HHsearch alignment for GI: 254780750 and conserved domain: PRK09361

>PRK09361 radB DNA repair and recombination protein RadB; Provisional.
Probab=92.59  E-value=0.79  Score=24.63  Aligned_cols=121  Identities=13%  Similarity=0.132  Sum_probs=59.8

Q ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHHHH-CCCCCCHHHCCCCCCCEEEEEE-E-CCCCCCC-CCCHHHHH---HHHHH
Q ss_conf             643999967784407899999999999997-1985303532068221056765-2-3766113-85328999---99999
Q gi|254780750|r  649 SGKLWLLTGPNMGGKSTFLRQNALIVIMAQ-MGSYVPASYAHIGIVDKLFSRV-G-SADNLAS-GRSTFMVE---MIETA  721 (920)
Q Consensus       649 ~~~~~iiTGpNmgGKSt~lRqval~vilAQ-iG~fVPA~~a~i~~~D~IftRi-G-a~D~l~~-g~STF~vE---m~e~~  721 (920)
T Consensus        22 ~G~itei~G~pG~GKTtl~lq~a~~~~~~g~~vlYidtE~~~~er~~qi~~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~  101 (224)
T PRK09361         22 RGTITQIYGPPGSGKTNICIQLAVEAARQGKKVIYIDTEGLSPERFKQIAGEDFEELLSNIIIFEPSSFEEQREAIQKAE  101 (224)
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCCHHHHHHCCEEECCCCHHHHHHHHHHHH
T ss_conf             88799998999985999999999999974990999678767889999985657345420614724798899999999999


Q ss_pred             HHHHHCCCCCEEEEECCCC--------CCCHHHHH-HHHH--HHHHHHHHHCCCEEEEECCC
Q ss_conf             9999589985699932588--------98805679-9999--99999997269849997487
Q gi|254780750|r  722 SILNQATNQSFVILDEIGR--------GTATLDGL-SIAW--ATIEYLHETNRCRGLLATHF  772 (920)
Q Consensus       722 ~IL~~at~~SLVllDElGr--------GTst~DG~-aiA~--aile~l~~~~~~~~lfaTHy  772 (920)
T Consensus       102 ~~~~--~~~~lvVIDSi~~~~~~e~~~~~~~-~~~~~l~~~~~~L~~~a~~~~~~vvl~nqV  160 (224)
T PRK09361        102 KIAK--ENVGLIVLDSATSLYRLELDDNDNS-KLNRELGKQISHLLSLARKHNIAVVITNQV  160 (224)
T ss_pred             HHHH--CCCCEEEEECCHHHEEHHCCCCCCH-HHHHHHHHHHHHHHHHHHHCCCEEEEEEEE
T ss_conf             8750--5873899962301000001457658-999999999999999999719869999668