HHsearch alignment for GI: 254780750 and conserved domain: PRK11247
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional.
Probab=98.12 E-value=4.6e-05 Score=56.27 Aligned_cols=183 Identities=17% Similarity=0.167 Sum_probs=88.0
Q ss_pred CCEECCCCCCEEECCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 51210478714000046805887631028770444345635877776643999967784407899999999999997198
Q gi|254780750|r 602 CRPIIDNSTNFIVKDGRHPIVEKTLKQQSSKPFIANDCDLSCPNDKNSGKLWLLTGPNMGGKSTFLRQNALIVIMAQMGS 681 (920)
Q Consensus 602 ~rP~i~~~~~l~i~~gRHPviE~~l~~~~~~~fVpNdi~l~~~~~~~~~~~~iiTGpNmgGKSt~lRqval~vilAQiG~ 681 (920)
T Consensus 3 ~~~~~~~g~~l~v~nlsk~---------yg~~~~L~dIs~~I----~~GEiv~LiG~nGaGKSTLlr~i~Gl~-~p~~G~ 68 (257)
T PRK11247 3 NTARLNQGTPLLLNAVSKH---------YGERTVLNQLDLHI----PAGQFVAVVGRSGCGKSTLLRLLAGLE-TPTAGD 68 (257)
T ss_pred CCCCCCCCCCEEEEEEEEE---------ECCEEEECCEEEEE----CCCCEEEEECCCCCHHHHHHHHHHCCC-CCCCCE
T ss_conf 8677899985899768999---------89988982407588----799899999899888999999996589-888870
Q ss_pred C----CCHHH--CCCCCCC---EEEEEEECCCCCCCCCCHH----HHHHH---------------------HHHHHHH-H
Q ss_conf 5----30353--2068221---0567652376611385328----99999---------------------9999999-5
Q gi|254780750|r 682 Y----VPASY--AHIGIVD---KLFSRVGSADNLASGRSTF----MVEMI---------------------ETASILN-Q 726 (920)
Q Consensus 682 f----VPA~~--a~i~~~D---~IftRiGa~D~l~~g~STF----~vEm~---------------------e~~~IL~-~ 726 (920)
T Consensus 69 I~~~~~~i~~~~~~i~~vfQ~~~l~~~~tV~eni~~gl~~~~~~~~~e~l~~vgL~~~~~~~p~~LSGGqkQRvaiAraL 148 (257)
T PRK11247 69 LLAGTAPLAEAQEDTRLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADRANEWPAALSGGQKQRVALARAL 148 (257)
T ss_pred EEECCEEHHHHHHCEEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCHHHCCHHHHHHHHHHHHH
T ss_conf 89898755443110079932564476778999986321410699999999985991355369444899999999999998
Q ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHH-HHHHHCCCEEEEEEEEEEECCEEEEEEEE
Q ss_conf 89985699932588988056799999999999972698499974875797-66430688589999999609927787777
Q gi|254780750|r 727 ATNQSFVILDEIGRGTATLDGLSIAWATIEYLHETNRCRGLLATHFHELT-DLSKSLKRFHNATLQVSDSNEGIIFLHKV 805 (920)
Q Consensus 727 at~~SLVllDElGrGTst~DG~aiA~aile~l~~~~~~~~lfaTHy~eL~-~l~~~~~~v~n~~~~~~~~~~~i~flykl 805 (920)
T Consensus 149 ~~~P~lLlLDEPtsgLD~~~~~~i-~~ll~~L~~e~g~TIi~vTHdl~ea~~laDR---I~--v----m~~G~Iv~d~~~ 218 (257)
T PRK11247 149 IHRPRLLLLDEPLGALDALTRIEM-QDLIESLWQQHGFTVLLVTHDVSEAVAMADR---VL--L----IEEGKIGLDLTV 218 (257)
T ss_pred HCCCCEEEEECCCCCCCHHHHHHH-HHHHHHHHHHHCCEEEEECCCHHHHHHHCCE---EE--E----EECCEEEEEEEC
T ss_conf 459999998098765799999999-9999999996098999988799999996999---99--9----989999997118
Q ss_pred EEC
Q ss_conf 447
Q gi|254780750|r 806 IPG 808 (920)
Q Consensus 806 ~~G 808 (920)
T Consensus 219 d~~ 221 (257)
T PRK11247 219 DLP 221 (257)
T ss_pred CCC
T ss_conf 999