HHsearch alignment for GI: 254780750 and conserved domain: TIGR03185
>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD. This model describes the DndB protein encoded by an operon associated with a sulfur-containing modification to DNA. The operon is sporadically distributed in bacteria, much like some restriction enzyme operons. DndD is described as a putative ATPase. The small number of examples known so far include species from among the Firmicutes, Actinomycetes, Proteobacteria, and Cyanobacteria.
Probab=93.93 E-value=0.1 Score=31.34 Aligned_cols=36 Identities=17% Similarity=0.126 Sum_probs=21.1
Q ss_pred HCCEEECCCCCCCCCCCC--------------CCCCHHHHHHHHHHHHHC
Q ss_conf 181891078899888762--------------656176699999999988
Q gi|254780750|r 66 LGITLTKRGKHLGKDIPM--------------CGVPVHTANHYIQKLIKI 101 (920)
Q Consensus 66 L~i~lt~r~~~~~~~~pm--------------aGvP~~~l~~yl~~Lv~~ 101 (920)
T Consensus 28 k~i~li~G~NG~GKTTll~Ai~~~LYG~~~~~~~~~~~~y~~~~~~~~n~ 77 (650)
T TIGR03185 28 KPIILIGGLNGAGKTTLLDAIQLGLYGKRAYCSKRGNQSYEQYLHGYINR 77 (650)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHC
T ss_conf 98799977999978999999999956951003454544699999998612