HHsearch alignment for GI: 254780750 and conserved domain: cd00983

>cd00983 recA RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange.

Probab=96.13  E-value=0.07  Score=32.51  Aligned_cols=122  Identities=19%  Similarity=0.267  Sum_probs=69.4

Q ss_pred             CCCEEEEEECCCCCCHHHH-HHHHHHHHHHHHCCC---CCCHHHCCCCCCCEEEEEEEC-CCCCCCCCCHHHHHHHHHHH
Q ss_conf             6643999967784407899-999999999997198---530353206822105676523-76611385328999999999
Q gi|254780750|r  648 NSGKLWLLTGPNMGGKSTF-LRQNALIVIMAQMGS---YVPASYAHIGIVDKLFSRVGS-ADNLASGRSTFMVEMIETAS  722 (920)
Q Consensus       648 ~~~~~~iiTGpNmgGKSt~-lRqval~vilAQiG~---fVPA~~a~i~~~D~IftRiGa-~D~l~~g~STF~vEm~e~~~  722 (920)
T Consensus        53 P~GRivei~G~essGKTtlal~~ia~aQ---k~gg~~~~iDaE~a~-d~--~~a~~lGVD~~~l~~~qp~~~Eq~l~i~~  126 (325)
T cd00983          53 PKGRIIEIYGPESSGKTTLALHAIAEAQ---KLGGTVAFIDAEHAL-DP--VYAKKLGVDLDNLLISQPDTGEQALEIAD  126 (325)
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHH---HCCCEEEEEEHHHCC-CH--HHHHHCCCCHHHEEEECCCHHHHHHHHHH
T ss_conf             6880899988987779999999999987---359839999625425-98--99998099846758966638999999999


Q ss_pred             HHHHCCCCCEEEEECCCCCCCHHH----------H-H----HHHHHHHHHHHHHCCCEEEEECCCHHH
Q ss_conf             999589985699932588988056----------7-9----999999999997269849997487579
Q gi|254780750|r  723 ILNQATNQSFVILDEIGRGTATLD----------G-L----SIAWATIEYLHETNRCRGLLATHFHEL  775 (920)
Q Consensus       723 IL~~at~~SLVllDElGrGTst~D----------G-~----aiA~aile~l~~~~~~~~lfaTHy~eL  775 (920)
T Consensus       127 ~li~s~~~dliViDSvaal~p~~E~e~~~~d~~vg~~ArlmskalRklt~~l~k~~~~lIfiNQ~R~k  194 (325)
T cd00983         127 SLVRSGAVDLIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGSINKSNTTVIFINQLREK  194 (325)
T ss_pred             HHHCCCCCCEEEECCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHH
T ss_conf             97515887679981511236578876011321143899999999999998753378079995543221