HHsearch alignment for GI: 254780750 and conserved domain: cd01122

>cd01122 GP4d_helicase GP4d_helicase is a homohexameric 5'-3' helicases. Helicases couple NTP hydrolysis to the unwinding of nucleic acid duplexes into their component strands.
Probab=95.93  E-value=0.025  Score=35.80  Aligned_cols=44  Identities=36%  Similarity=0.403  Sum_probs=31.9

Q ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCC
Q ss_conf             664399996778440789999999999999719853035320682
Q gi|254780750|r  648 NSGKLWLLTGPNMGGKSTFLRQNALIVIMAQMGSYVPASYAHIGI  692 (920)
Q Consensus       648 ~~~~~~iiTGpNmgGKSt~lRqval~vilAQiG~fVPA~~a~i~~  692 (920)
T Consensus        28 ~~GeL~viaarpg~GKT~f~~~~a~~~~-~~~g~~vl~~SlEm~~   71 (271)
T cd01122          28 RKGELIILTAGTGVGKTTFLREYALDLI-TQHGVRVGTISLEEPV   71 (271)
T ss_pred             CCCCEEEEEECCCCCHHHHHHHHHHHHH-HHCCCEEEEEECCCCH
T ss_conf             9980899996899869999999999999-9769908999704999