HHsearch alignment for GI: 254780750 and conserved domain: cd03227
>cd03227 ABC_Class2 ABC-type Class 2 contains systems involved in cellular processes other than transport. These families are characterised by the fact that the ABC subunit is made up of duplicated, fused ABC modules (ABC2). No known transmembrane proteins or domains are associated with these proteins.
Probab=100.00 E-value=3.2e-34 Score=274.09 Aligned_cols=156 Identities=30% Similarity=0.321 Sum_probs=132.4
Q ss_pred ECCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCC
Q ss_conf 00046805887631028770444345635877776643999967784407899999999999997198530353206822
Q gi|254780750|r 614 VKDGRHPIVEKTLKQQSSKPFIANDCDLSCPNDKNSGKLWLLTGPNMGGKSTFLRQNALIVIMAQMGSYVPASYAHIGIV 693 (920)
Q Consensus 614 i~~gRHPviE~~l~~~~~~~fVpNdi~l~~~~~~~~~~~~iiTGpNmgGKSt~lRqval~vilAQiG~fVPA~~a~i~~~ 693 (920)
T Consensus 2 ~~~~~~~~-----------~~vpndi~l~------~g~~~iItGpN~sGKSt~Lr~i~l~~~~a~~~~~~~~~~~~~~~~ 64 (162)
T cd03227 2 IVLGRFPS-----------YFVPNDVTFG------EGSLTIITGPNGSGKSTILDAIGLALGGAQSATRRRSGVKAGCIV 64 (162)
T ss_pred CCHHCCCC-----------CEECCCEECC------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC
T ss_conf 01310899-----------7507702608------986899989987757999999999999863267752555427764
Q ss_pred CEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCC--CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECC
Q ss_conf 10567652376611385328999999999999589--9856999325889880567999999999999726984999748
Q gi|254780750|r 694 DKLFSRVGSADNLASGRSTFMVEMIETASILNQAT--NQSFVILDEIGRGTATLDGLSIAWATIEYLHETNRCRGLLATH 771 (920)
Q Consensus 694 D~IftRiGa~D~l~~g~STF~vEm~e~~~IL~~at--~~SLVllDElGrGTst~DG~aiA~aile~l~~~~~~~~lfaTH 771 (920)
T Consensus 65 ~~~~~~~~---~~~~~lSgg~~~~~~l~~~l~~~~~~~~~lillDE~~~Gtd~~~~~~l~~~i~~~~~-~-~~~~i~tTH 139 (162)
T cd03227 65 AAVSAELI---FTRLQLSGGEKELSALALILALASLKPRPLYILDEIDRGLDPRDGQALAEAILEHLV-K-GAQVIVITH 139 (162)
T ss_pred HHHEEEEE---ECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHH-C-CCEEEEECC
T ss_conf 02305766---412000542999999999998542489848996365579998899999999999997-6-998999797
Q ss_pred CHHHHHHHHHCCCEEEEEEE
Q ss_conf 75797664306885899999
Q gi|254780750|r 772 FHELTDLSKSLKRFHNATLQ 791 (920)
Q Consensus 772 y~eL~~l~~~~~~v~n~~~~ 791 (920)
T Consensus 140 ~~eL~~lad~~~~~~~~~~~ 159 (162)
T cd03227 140 LPELAELADKLIHIKKVITG 159 (162)
T ss_pred HHHHHHHHHHHCCEEEEEEE
T ss_conf 39999998750074787750