HHsearch alignment for GI: 254780750 and conserved domain: cd03230

>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=98.28  E-value=1.6e-05  Score=59.61  Aligned_cols=127  Identities=24%  Similarity=0.365  Sum_probs=72.7

Q ss_pred             EEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCC--------------------
Q ss_conf             443456358777766439999677844078999999999999971985303532068221--------------------
Q gi|254780750|r  635 IANDCDLSCPNDKNSGKLWLLTGPNMGGKSTFLRQNALIVIMAQMGSYVPASYAHIGIVD--------------------  694 (920)
Q Consensus       635 VpNdi~l~~~~~~~~~~~~iiTGpNmgGKSt~lRqval~vilAQiG~fVPA~~a~i~~~D--------------------  694 (920)
T Consensus        15 ~L~~vsl~i----~~Gei~gl~G~NGaGKSTLl~~i~--------Gl~~p-~~G~i~i~g~~~~~~~~~~~~~ig~v~q~   81 (173)
T cd03230          15 ALDDISLTV----EKGEIYGLLGPNGAGKTTLIKIIL--------GLLKP-DSGEIKVLGKDIKKEPEEVKRRIGYLPEE   81 (173)
T ss_pred             EEECEEEEE----CCCCEEEEECCCCCCHHHHHHHHH--------CCCCC-CCCEEEECCEECCCCHHHHHCCEEEEECC
T ss_conf             982208788----799399998789979999999997--------68577-87889999999886848886578999568


Q ss_pred             -EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCH
Q ss_conf             -0567652376611385328999999999999589985699932588988056799999999999972698499974875
Q gi|254780750|r  695 -KLFSRVGSADNLASGRSTFMVEMIETASILNQATNQSFVILDEIGRGTATLDGLSIAWATIEYLHETNRCRGLLATHFH  773 (920)
Q Consensus       695 -~IftRiGa~D~l~~g~STF~vEm~e~~~IL~~at~~SLVllDElGrGTst~DG~aiA~aile~l~~~~~~~~lfaTHy~  773 (920)
T Consensus        82 ~~l~~~ltv~e~l~--LSgG~kqrv~ia~a--l~~~p~lllLDEPt~gLD~~~~~~i-~~~i~~l~~~-g~tvi~~tH~l  155 (173)
T cd03230          82 PSLYENLTVRENLK--LSGGMKQRLALAQA--LLHDPELLILDEPTSGLDPESRREF-WELLRELKKE-GKTILLSSHIL  155 (173)
T ss_pred             CCCCCCCCHHHHHH--CCHHHHHHHHHHHH--HHCCCCEEEECCCCCCCCHHHHHHH-HHHHHHHHHC-CCEEEEECCCH
T ss_conf             76671267789863--39899999999999--9649999999088657999999999-9999999968-99999992838


Q ss_pred             HHH-HHHH
Q ss_conf             797-6643
Q gi|254780750|r  774 ELT-DLSK  780 (920)
Q Consensus       774 eL~-~l~~  780 (920)
T Consensus       156 ~~~~~~~d  163 (173)
T cd03230         156 EEAERLCD  163 (173)
T ss_pred             HHHHHHCC
T ss_conf             99998699