HHsearch alignment for GI: 254780750 and conserved domain: cd03231
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=97.93 E-value=0.00041 Score=49.16 Aligned_cols=131 Identities=18% Similarity=0.131 Sum_probs=64.3
Q ss_pred EEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCC---------------------C
Q ss_conf 4434563587777664399996778440789999999999999719853035320682---------------------2
Q gi|254780750|r 635 IANDCDLSCPNDKNSGKLWLLTGPNMGGKSTFLRQNALIVIMAQMGSYVPASYAHIGI---------------------V 693 (920)
Q Consensus 635 VpNdi~l~~~~~~~~~~~~iiTGpNmgGKSt~lRqval~vilAQiG~fVPA~~a~i~~---------------------~ 693 (920)
T Consensus 15 il~~vs~~i----~~Ge~~~l~G~NGsGKSTLlk~i~Gl---------~~p~sG~i~~~g~~~~~~~~~~~~~i~~~~~~ 81 (201)
T cd03231 15 LFSGLSFTL----AAGEALQVTGPNGSGKTTLLRILAGL---------SPPLAGRVLLNGGPLDFQRDSIARGLLYLGHA 81 (201)
T ss_pred EEECCEEEE----CCCCEEEEECCCCCCHHHHHHHHHCC---------CCCCCEEEEECCEECCCCCHHHHHHEEEECCC
T ss_conf 995307888----79959999999999999999999667---------78885299999998331487767117997876
Q ss_pred CEEEEEEECCCCCCCCCCHHHH--------------------------HHHHHHHHHHHCCCCCEEEEECCCCCCCHHHH
Q ss_conf 1056765237661138532899--------------------------99999999995899856999325889880567
Q gi|254780750|r 694 DKLFSRVGSADNLASGRSTFMV--------------------------EMIETASILNQATNQSFVILDEIGRGTATLDG 747 (920)
Q Consensus 694 D~IftRiGa~D~l~~g~STF~v--------------------------Em~e~~~IL~~at~~SLVllDElGrGTst~DG 747 (920)
T Consensus 82 ~~~~~~ltv~en~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~LSgGqkqRv~lA~al~~~p~llllDEPt~gLD~~s~ 161 (201)
T cd03231 82 PGIKTTLSVLENLRFWHADHSDEQVEEALARVGLNGFEDRPVAQLSAGQQRRVALARLLLSGRPLWILDEPTTALDKAGV 161 (201)
T ss_pred CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHCCCHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHH
T ss_conf 54557878999998753223699999999985991032588234799999999999999749999998088655799999
Q ss_pred HHHHHHHHHHHHHHCCCEEEEECC-CHHHHHHHH
Q ss_conf 999999999999726984999748-757976643
Q gi|254780750|r 748 LSIAWATIEYLHETNRCRGLLATH-FHELTDLSK 780 (920)
Q Consensus 748 ~aiA~aile~l~~~~~~~~lfaTH-y~eL~~l~~ 780 (920)
T Consensus 162 ~~~-~~~l~~~~~~-g~~ii~~sH~~~~~~~~~~ 193 (201)
T cd03231 162 ARF-AEAMAGHCAR-GGMVVLTTHQDLGLSEAGA 193 (201)
T ss_pred HHH-HHHHHHHHHC-CCEEEEEECCHHHHHHHCC
T ss_conf 999-9999999868-9999999867146787229