>cd03236 ABC_RNaseL_inhibitor_domain1 The ATPase domain 1 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI s are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLIs have an N-terminal Fe-S domain and two nucleotide binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.

Probab=97.73  E-value=0.00062  Score=47.82  Aligned_cols=48  Identities=21%  Similarity=0.066  Sum_probs=31.7

Q ss_pred             CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHH
Q ss_conf             89985699932588988056799999999999972698499974875797
Q gi|254780750|r  727 ATNQSFVILDEIGRGTATLDGLSIAWATIEYLHETNRCRGLLATHFHELT  776 (920)
Q Consensus       727 at~~SLVllDElGrGTst~DG~aiA~aile~l~~~~~~~~lfaTHy~eL~  776 (920)
T Consensus       155 ~~~P~iLlLDEPTs~LD~~~-~~~v~~li~~L~~~-G~Tvi~vtHDl~~~  202 (255)
T cd03236         155 ARDADFYFFDEPSSYLDIKQ-RLNAARLIRELAED-DNYVLVVEHDLAVL  202 (255)
T ss_pred             CCCCCEEEEECCCCCCCHHH-HHHHHHHHHHHHHC-CCEEEEECCCHHHH
T ss_conf             68999999979876589999-99999999999978-99999990789999