HHsearch alignment for GI: 254780750 and conserved domain: cd03258

>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=96.18  E-value=0.099  Score=31.35  Aligned_cols=138  Identities=25%  Similarity=0.292  Sum_probs=67.3

Q ss_pred             EEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCC------CCH-HH-------CCCCCCC---EEE
Q ss_conf             443456358777766439999677844078999999999999971985------303-53-------2068221---056
Q gi|254780750|r  635 IANDCDLSCPNDKNSGKLWLLTGPNMGGKSTFLRQNALIVIMAQMGSY------VPA-SY-------AHIGIVD---KLF  697 (920)
Q Consensus       635 VpNdi~l~~~~~~~~~~~~iiTGpNmgGKSt~lRqval~vilAQiG~f------VPA-~~-------a~i~~~D---~If  697 (920)
T Consensus        20 al~~vsl~i----~~Ge~~~ivG~SGsGKSTllr~i~gL~-~p~sG~I~~~g~~i~~~~~~~~~~~Rr~ig~VFQ~~~L~   94 (233)
T cd03258          20 ALKDVSLSV----PKGEIFGIIGRSGAGKSTLIRCINGLE-RPTSGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLL   94 (233)
T ss_pred             EEECCEEEE----CCCCEEEEECCCCCHHHHHHHHHHCCC-CCCCCEEEECCEECCCCCHHHHHHHHCCCCEEECCCCCC
T ss_conf             984828899----999999998898058999999996799-999808999999989799999999862587794377889


Q ss_pred             EEEECCCCCCC-----CCCH-----HHHHHHHHH---------------------HH-HHHCCCCCEEEEECCCCCCCHH
Q ss_conf             76523766113-----8532-----899999999---------------------99-9958998569993258898805
Q gi|254780750|r  698 SRVGSADNLAS-----GRST-----FMVEMIETA---------------------SI-LNQATNQSFVILDEIGRGTATL  745 (920)
Q Consensus       698 tRiGa~D~l~~-----g~ST-----F~vEm~e~~---------------------~I-L~~at~~SLVllDElGrGTst~  745 (920)
T Consensus        95 ~~~tv~~nv~~~l~~~~~~~~~~~~r~~~lL~~vgL~~~~~~yP~eLSGGq~QRVaIARAL~~~P~lllaDEP---Ts~L  171 (233)
T cd03258          95 SSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKADAYPAQLSGGQKQRVGIARALANNPKVLLCDEA---TSAL  171 (233)
T ss_pred             CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCC---CCCC
T ss_conf             9883999999999974999999999999999867991676269652677888999999998339989996597---6646


Q ss_pred             HHHH--HHHHHHHHHHHHCCCEEEEECCCHHHH-HHHH
Q ss_conf             6799--999999999972698499974875797-6643
Q gi|254780750|r  746 DGLS--IAWATIEYLHETNRCRGLLATHFHELT-DLSK  780 (920)
Q Consensus       746 DG~a--iA~aile~l~~~~~~~~lfaTHy~eL~-~l~~  780 (920)
T Consensus       172 D~~~~~~il~ll~~l~~e~g~t~i~vTHDl~~~~~~ad  209 (233)
T cd03258         172 DPETTQSILALLRDINRELGLTIVLITHEMEVVKRICD  209 (233)
T ss_pred             CHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCC
T ss_conf             98899999999999999729899998989999998699