HHsearch alignment for GI: 254780750 and conserved domain: pfam00004

>pfam00004 AAA ATPase family associated with various cellular activities (AAA). AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes.
Probab=94.56  E-value=0.38  Score=27.00  Aligned_cols=103  Identities=20%  Similarity=0.220  Sum_probs=49.0

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHC--CCC
Q ss_conf             999677844078999999999999971985303532068221056765237661138532899999999999958--998
Q gi|254780750|r  653 WLLTGPNMGGKSTFLRQNALIVIMAQMGSYVPASYAHIGIVDKLFSRVGSADNLASGRSTFMVEMIETASILNQA--TNQ  730 (920)
Q Consensus       653 ~iiTGpNmgGKSt~lRqval~vilAQiG~fVPA~~a~i~~~D~IftRiGa~D~l~~g~STF~vEm~e~~~IL~~a--t~~  730 (920)
T Consensus         1 iLl~GppGtGKT~~a~~la-----~~~~~~~----~~v~~~~~~~~--------~~g~~~-----~~i~~~f~~a~~~~p   58 (131)
T pfam00004         1 LLLYGPPGTGKTTLAKAVA-----KELGAPF----IEISGSELVSK--------YVGESE-----KRLRELFEAAKKLAP   58 (131)
T ss_pred             CEEECCCCCCHHHHHHHHH-----HHHCCCC----EECCCCCCCCC--------CCCHHH-----HHHHHHHHHHHHCCC
T ss_conf             9878999999999999999-----9978985----33242012223--------345068-----889999999997499


Q ss_pred             CEEEEECCC----CCCCHHH--HHHHHHHHHHHHHHH----CCCEEEEECCCHHHHH
Q ss_conf             569993258----8988056--799999999999972----6984999748757976
Q gi|254780750|r  731 SFVILDEIG----RGTATLD--GLSIAWATIEYLHET----NRCRGLLATHFHELTD  777 (920)
Q Consensus       731 SLVllDElG----rGTst~D--G~aiA~aile~l~~~----~~~~~lfaTHy~eL~~  777 (920)
T Consensus        59 ~Il~iDe~d~l~~~~~~~~~~~~~~~~~~ll~~ld~~~~~~~~v~~I~tTN~~~~ld  115 (131)
T pfam00004        59 CVIFIDEIDALAGSRGSGGDSESRRVVNQLLTELDGFTSSLSKVIVIAATNRPDKLD  115 (131)
T ss_pred             CEEEECHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHCC
T ss_conf             189831167775167888887513268789999850224688769999759904499