HHsearch alignment for GI: 254780750 and conserved domain: pfam08298

>pfam08298 AAA_PrkA PrkA AAA domain. This is a family of PrkA bacterial and archaeal serine kinases approximately 630 residues long. This is the N-terminal AAA domain.
Probab=90.11  E-value=0.31  Score=27.67  Aligned_cols=21  Identities=33%  Similarity=0.577  Sum_probs=10.8

Q ss_pred             CCEEEEEECCCCCCHHHHHHH
Q ss_conf             643999967784407899999
Q gi|254780750|r  649 SGKLWLLTGPNMGGKSTFLRQ  669 (920)
Q Consensus       649 ~~~~~iiTGpNmgGKSt~lRq  669 (920)
T Consensus        84 ~kqIllL~GPVGsGKSsl~e~  104 (358)
T pfam08298        84 RKQILYLLGPVGGGKSSLAER  104 (358)
T ss_pred             CEEEEEEECCCCCCHHHHHHH
T ss_conf             105899977898775899999