RPSBLAST alignment for GI: 254780750 and conserved domain: PRK05399

>gnl|CDD|180056 PRK05399, PRK05399, DNA mismatch repair protein MutS; Provisional. Length = 854
 Score = 1095 bits (2836), Expect = 0.0
 Identities = 366/880 (41%), Positives = 535/880 (60%), Gaps = 32/880 (3%)

Query: 20  ENLKSSTPMMRQYIEIKSINPDSLVFYRMGDFYELFFDDALLASRCLGITLTKRGKHLGK 79
            ++   TPMM+QY+EIK+  PD+L+F+RMGDFYELFF+DA  ASR L ITLTKRGK  G+
Sbjct: 3   MDMSKLTPMMQQYLEIKAQYPDALLFFRMGDFYELFFEDAKKASRLLDITLTKRGKSAGE 62

Query: 80  DIPMCGVPVHTANHYIQKLIKIGHRIAICEQIESPLEAKKRGNKSLVRRNVVRLVTPGTL 139
            IPM GVP H A  Y+ KL+K G+++AICEQ+E P  AK       V+R VVR+VTPGT+
Sbjct: 63  PIPMAGVPYHAAEGYLAKLVKKGYKVAICEQVEDPATAK-----GPVKREVVRIVTPGTV 117

Query: 140 TEDQLLSPTDSNYLMAVARIRTEWAIAWIDISTGIFKISTSNHDRLISDIMRIDPREIIF 199
           T++ LL    +NYL A+A+    + +A++D+STG F+++  + + L++++ R++P EI+ 
Sbjct: 118 TDEALLDEKQNNYLAAIAQDGGGYGLAYLDLSTGEFRVTELDEEELLAELARLNPAEILV 177

Query: 200 SEKELSHAEYKSLFETLGNVAVAQPNVFFDHSISESRIADYYNITTVDTFGSFSQVEKTA 259
            E        +     L      +P   FD   +E R+ + + + ++D FG    +   A
Sbjct: 178 PEDF-----SEDELLLLRRGLRRRPPWEFDLDTAEKRLLEQFGVASLDGFGVDLPLAIRA 232

Query: 260 AAAAISYIKKTQMVNKPTIGYPEREDIQSTLFIDSAARSNLEILRTLSGSREQSLLKTID 319
           A A + Y+K+TQ  + P +  P+R +    L +D+A R NLE+   L G R+ SLL  +D
Sbjct: 233 AGALLQYLKETQKRSLPHLRSPKRYEESDYLILDAATRRNLELTENLRGGRKNSLLSVLD 292

Query: 320 YSITGAGGRLFAERIASPLTDSTKINTRLDSINFFIQNPILINPIQKILKSSPDVPRSLS 379
            ++T  GGRL    +  PL D   I  RLD++   +++P+L   ++++LK   D+ R LS
Sbjct: 293 RTVTAMGGRLLRRWLHRPLRDREAIEARLDAVEELLEDPLLREDLRELLKGVYDLERLLS 352

Query: 380 RLKIGRGEPKDIAVIRDGIRSGINILNLFLKNDLPEELRGAVEKLKKLPQSLEKTLSSML 439
           R+ +GR  P+D+A +RD + +   +  L  + D    L    E+L  L + L   L   +
Sbjct: 353 RIALGRANPRDLAALRDSLEALPELKELLAELD-SPLLAELAEQLDPLEE-LADLLERAI 410

Query: 440 SDDLPTFKRDGGFLRDGADASLDETRSLRDQSKRIIASLQLKYAEETKIKNLKIKHNNNL 499
            ++ P   RDGG + DG DA LDE R+L D  K  +A L+ +  E T I +LK+ +N   
Sbjct: 411 VEEPPLLIRDGGVIADGYDAELDELRALSDNGKDWLAELEARERERTGISSLKVGYNKVF 470

Query: 500 GYFIEVTSSSASVLKKDLESKDRFIHRQTMSNLTRFTTLELIDLENRITNATNSALLIEL 559
           GY+IEVT ++   + +D      +I RQT+ N  R+ T EL +LE++I +A   AL +E 
Sbjct: 471 GYYIEVTKANLDKVPED------YIRRQTLKNAERYITPELKELEDKILSAEEKALALEY 524

Query: 560 ESFEILSNAIIEQSESLDNASQVIAIIDISIALAILAKEQNYCRPIIDNSTNFIVKDGRH 619
           E FE L   + E  E L   ++ +A +D+  +LA +A+E NY RP   +     +++GRH
Sbjct: 525 ELFEELREEVAEHIERLQKLAKALAELDVLASLAEVAEENNYVRPEFTDDPGIDIEEGRH 584

Query: 620 PIVEKTLKQQSSKPFIANDCDLSCPNDKNSGKLWLLTGPNMGGKSTFLRQNALIVIMAQM 679
           P+VE+ L     +PF+ NDCDL         +L L+TGPNM GKST++RQ ALIV++AQ+
Sbjct: 585 PVVEQVL---GGEPFVPNDCDLD-----EERRLLLITGPNMAGKSTYMRQVALIVLLAQI 636

Query: 680 GSYVPASYAHIGIVDKLFSRVGSADNLASGRSTFMVEMIETASILNQATNQSFVILDEIG 739
           GS+VPA  A IGIVD++F+R+G++D+LASGRSTFMVEM ETA+ILN AT +S V+LDEIG
Sbjct: 637 GSFVPAESARIGIVDRIFTRIGASDDLASGRSTFMVEMTETANILNNATERSLVLLDEIG 696

Query: 740 RGTATLDGLSIAWATIEYLHETNRCRGLLATHFHELTDLSKSLKRFHNATLQVSDSNEGI 799
           RGT+T DGLSIAWA  EYLH+    + L ATH+HELT+L + L    N  + V +    I
Sbjct: 697 RGTSTYDGLSIAWAVAEYLHDKIGAKTLFATHYHELTELEEKLPGVKNVHVAVKEHGGDI 756

Query: 800 IFLHKVIPGIADHSYGIQVGKLAGLPNTVISRAYDILKTFEKLYHHNQKDMRLYYPEIQT 859
           +FLHKV+PG AD SYGI V KLAGLP +VI RA +IL   E      +          + 
Sbjct: 757 VFLHKVVPGAADKSYGIHVAKLAGLPASVIKRAREILAQLESASEKAKAA-----SAEED 811

Query: 860 KESKNNLSKNDKLFVEKIKCLNLDEMSPLTALKTLYAVKA 899
           + S     +   L +E +K L+ D ++P  AL  LY +K 
Sbjct: 812 QLSLFAEPEESPL-LEALKALDPDNLTPREALNLLYELKK 850